CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014691	Neoasaia chiangmaiensis strain NBRC 101099 chromosome, complete genome	0 crisprs	DinG,csa3,RT,cas3	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2135678 : 2172327

Rhizobium_phage(12.5%)

head,capsid,portal,plate,terminase,tail,integrase

attL 2146389:2146404|attR 2160555:2160570

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_169852744.1\|2135678_2136719_-\|integrase	integrase	NA	NA	NA	NA
WP_169852745.1\|2136807_2137170_-	DNA-binding protein	NA	NA	NA	NA
WP_077807254.1\|2137206_2137686_-	hypothetical protein	A0A067XQV3	Caulobacter_phage	1.1e-39	55.7
WP_169852746.1\|2138945_2139320_-	hypothetical protein	NA	NA	NA	NA
WP_077807257.1\|2139484_2140978_-	DNA cytosine methyltransferase	A0A068CDI9	Rhizobium_phage	4.9e-110	56.2
WP_147150839.1\|2140974_2141730_-	hypothetical protein	A0A0U1SZL2	Pseudomonas_phage	4.5e-27	37.4
WP_149026876.1\|2141726_2141948_-	hypothetical protein	NA	NA	NA	NA
WP_077807260.1\|2142138_2142540_-	hypothetical protein	NA	NA	NA	NA
WP_077807261.1\|2142536_2142836_-	hypothetical protein	NA	NA	NA	NA
WP_077807262.1\|2142835_2143219_-	hypothetical protein	NA	NA	NA	NA
WP_147150837.1\|2143442_2143775_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_077807264.1\|2143852_2144071_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_077807265.1\|2144073_2144370_-	hypothetical protein	NA	NA	NA	NA
WP_077807267.1\|2144699_2145101_+	hypothetical protein	NA	NA	NA	NA
WP_077807268.1\|2145103_2145412_+	hypothetical protein	NA	NA	NA	NA
WP_147150871.1\|2145455_2145674_+	hypothetical protein	NA	NA	NA	NA
WP_077807270.1\|2145658_2145985_+	hypothetical protein	NA	NA	NA	NA
WP_077807271.1\|2145981_2147196_+	hypothetical protein	NA	NA	NA	NA
2146389:2146404	attL	NA	NA	NA	NA
WP_169852747.1\|2147192_2147342_+	hypothetical protein	NA	NA	NA	NA
WP_077807273.1\|2148228_2148750_+	hypothetical protein	NA	NA	NA	NA
WP_077808463.1\|2148920_2149268_+	hypothetical protein	NA	NA	NA	NA
WP_077807274.1\|2149450_2150302_+\|integrase	tyrosine-type recombinase/integrase	A0A166Y2G8	Gordonia_phage	3.5e-12	27.5
WP_077807275.1\|2150348_2150540_+	hypothetical protein	NA	NA	NA	NA
WP_077807276.1\|2150536_2151148_+	DUF3164 family protein	A0A1B0T6G5	Thiobacimonas_phage	1.6e-46	44.2
WP_147150835.1\|2151163_2151802_-	hypothetical protein	NA	NA	NA	NA
WP_077807278.1\|2151999_2152806_+	DNA adenine methylase	A0A291AUP9	Sinorhizobium_phage	3.0e-82	60.5
WP_077807279.1\|2152807_2153416_+	hypothetical protein	NA	NA	NA	NA
WP_077807280.1\|2153430_2154084_+	hypothetical protein	A0A0K1LMA6	Rhodobacter_phage	3.6e-25	33.3
WP_077807281.1\|2154238_2154847_+	hypothetical protein	NA	NA	NA	NA
WP_077807282.1\|2154827_2156834_+\|terminase	phage terminase large subunit family protein	G8EXZ6	Synechococcus_phage	1.4e-139	45.2
WP_077807283.1\|2156833_2157106_+	hypothetical protein	NA	NA	NA	NA
WP_077808464.1\|2157195_2158746_+\|portal	phage portal protein	V5Q9I2	Xylella_phage	2.1e-87	36.9
WP_077807284.1\|2158742_2159606_+	S49 family peptidase	A0A2D1GN02	Marinobacter_phage	8.1e-49	39.7
WP_077807285.1\|2159645_2160296_+	hypothetical protein	NA	NA	NA	NA
WP_077807286.1\|2160324_2160981_+\|head	head decoration protein	NA	NA	NA	NA
2160555:2160570	attR	NA	NA	NA	NA
WP_077807287.1\|2161079_2162117_+\|capsid	major capsid protein	A0A0A8ILA9	Aurantimonas_phage	1.5e-60	39.4
WP_147150833.1\|2162121_2162535_+	hypothetical protein	NA	NA	NA	NA
WP_077807289.1\|2162476_2163001_+	hypothetical protein	NA	NA	NA	NA
WP_077807290.1\|2163009_2163204_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_077807291.1\|2163200_2164691_+\|tail	phage tail sheath subtilisin-like domain-containing protein	B5TK67	Pseudomonas_phage	1.4e-59	37.0
WP_077807292.1\|2164701_2165085_+\|tail	phage tail protein	NA	NA	NA	NA
WP_077807293.1\|2165084_2165747_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_077807294.1\|2165864_2167754_+	hypothetical protein	NA	NA	NA	NA
WP_077807295.1\|2167756_2169055_+	DNA circularization N-terminal domain-containing protein	A0A2P9JZK2	Alteromonadaceae_phage	4.2e-09	25.3
WP_077807296.1\|2169051_2170197_+\|tail	phage tail protein	Q8SBG7	Shigella_phage	4.0e-27	28.7
WP_077807297.1\|2170205_2170703_+\|plate	phage baseplate assembly protein	NA	NA	NA	NA
WP_077807298.1\|2170713_2171211_+	phage GP46 family protein	A0A2P9JZK5	Alteromonadaceae_phage	2.5e-10	31.6
WP_077807299.1\|2171211_2172327_+\|plate	baseplate J/gp47 family protein	A0A068CC89	Rhizobium_phage	1.3e-11	30.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage