CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP042170	Flavobacterium sp. KBS0721 chromosome, complete genome	10 crisprs	csa3,WYL,cas3,DEDDh,PD-DExK	0	3	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042170_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042170_1

812629-812704

Orphan

Consensus_repeat	Method
AATATGTCGCTCCGATGGAGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042170_1

>merge|NZ_CP042170|1|812629-812704|CRISPRCasFinder
AATATGTCGCTCCGATGGAGCTTGATTTACCAAACGTAACATTATTTGCTATAAATATATCGCTCCGATGGAGCTT

>NZ_CP042170|1|1|812629-812704|CRISPRCasFinder
AATATGTCGCTCCGATGGAGCTT	GATTTACCAAACGTAACATTATTTGCTATA
AATATATCGCTCCGATGGAGCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042170.1\|WP_078006790.1\|801976_804649_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|372685
NZ_CP042170.1\|WP_078006780.1\|821847_823413_-\|glycoside-hydrolase	unknown	unknown	gnl\|CDD\|366525
NZ_CP042170.1\|WP_078006777.1\|832675_834247_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|185760
NZ_CP042170.1\|WP_078006995.1\|811912_812464_+\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|367140
NZ_CP042170.1\|WP_065448758.1\|808909_809317_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006786.1\|810539_811067_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006785.1\|811163_811520_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006996.1\|807585_808725_+\|cytochrome-c-peroxidase	unknown	unknown	gnl\|CDD\|163503
NZ_CP042170.1\|WP_078006783.1\|815575_817525_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377084
NZ_CP042170.1\|WP_078006778.1\|826027_828427_-\|alpha-xylosidase	unknown	unknown	gnl\|CDD\|269879
NZ_CP042170.1\|WP_078006791.1\|800581_801577_+\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223318
NZ_CP042170.1\|WP_078006779.1\|823785_825792_-\|glycoside-hydrolase-family-97-protein	unknown	unknown	gnl\|CDD\|371140
NZ_CP042170.1\|WP_078006784.1\|812827_815233_-\|glycoside-hydrolase-family-95-protein	unknown	unknown	gnl\|CDD\|379625
NZ_CP042170.1\|WP_078006789.1\|804665_805973_+\|DUF4876-domain-containing-protein	unknown	unknown	gnl\|CDD\|379795
NZ_CP042170.1\|WP_078006781.1\|819517_821761_-\|glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|185053
NZ_CP042170.1\|WP_078006787.1\|809434_810454_-\|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|234780
NZ_CP042170.1\|WP_078006782.1\|817848_819360_-\|cellulase-family-glycosylhydrolase	unknown	unknown	gnl\|CDD\|365907
NZ_CP042170.1\|WP_078006993.1\|831282_832617_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006994.1\|828668_831158_-\|glycoside-hydrolase-family-2	unknown	unknown	gnl\|CDD\|225789
NZ_CP042170.1\|WP_078006788.1\|805984_807583_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042170.1\|WP_078006790.1\|801976_804649_+\|TonB-dependent-receptor	gnl\|CDD\|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	1.19921e-09
NZ_CP042170.1\|WP_078006780.1\|821847_823413_-\|glycoside-hydrolase	gnl\|CDD\|366525	pfam01229, Glyco_hydro_39, Glycosyl hydrolases family 39.	5.38368e-121
NZ_CP042170.1\|WP_078006777.1\|832675_834247_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|185760	cd08977, SusD, starch binding outer membrane protein SusD. SusD-like proteins from Bacteroidetes, members of the human distal gut microbiota, are part of the starch utilization system (Sus). Sus is one of the large clusters of glycosyl hydrolases, called polysaccharide utilization loci (PULs), which play an important role in polysaccharide recognition and uptake, and it is needed for growth on amylose, amylopectin, pullulan, and maltooligosaccharides. SusD, together with SusC, a predicted beta-barrel porin, forms the minimum outer-membrane starch-binding complex. The adult human distal gut microbiota is essential for digestion of a large variety of dietary polysaccharides, for which humans lack the necessary glycosyl hydrolases.	1.87882e-35
NZ_CP042170.1\|WP_078006995.1\|811912_812464_+\|CvpA-family-protein	gnl\|CDD\|367140	pfam02674, Colicin_V, Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.	8.96235e-23
NZ_CP042170.1\|WP_078006783.1\|815575_817525_-\|hypothetical-protein	gnl\|CDD\|377084	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase. The catalytic triad of this esterase enzyme comprises residues Ser127, His403 and Asp391 in UniProtKB:P70665.	7.26375e-12
NZ_CP042170.1\|WP_078006784.1\|812827_815233_-\|glycoside-hydrolase-family-95-protein	gnl\|CDD\|379625	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain. This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain.	1.54742e-80
NZ_CP042170.1\|WP_078006778.1\|826027_828427_-\|alpha-xylosidase	gnl\|CDD\|269879	cd06593, GH31_xylosidase_YicI, alpha-xylosidase YicI-like. YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.	8.31758e-167
NZ_CP042170.1\|WP_078006791.1\|800581_801577_+\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|223318	COG0240, GpsA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	6.58731e-97
NZ_CP042170.1\|WP_078006779.1\|823785_825792_-\|glycoside-hydrolase-family-97-protein	gnl\|CDD\|371140	pfam10566, Glyco_hydro_97, Glycoside hydrolase 97. This domain is the catalytic region of the bacterial glycosyl-hydrolase family 97. This central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, form two additional non-catalytic domains. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands.	1.71641e-122
NZ_CP042170.1\|WP_078006996.1\|807585_808725_+\|cytochrome-c-peroxidase	gnl\|CDD\|163503	TIGR03791, TTQ_mauG, tryptophan tryptophylquinone biosynthesis enzyme MauG. Members of this protein family are the tryptophan tryptophylquinone biosynthesis (TTQ) enzyme MauG, as found in Methylobacterium extorquens and related species. This protein is required to complete the maturation of the TTQ cofactor in the methylamine dehydrogenase light (beta) chain.	3.3525e-78
NZ_CP042170.1\|WP_078006789.1\|804665_805973_+\|DUF4876-domain-containing-protein	gnl\|CDD\|379795	pfam16215, DUF4876, Protein of unknown function (DUF4876). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 392 and 433 amino acids in length. There is a conserved NNS sequence motif.	3.39211e-33
NZ_CP042170.1\|WP_078006781.1\|819517_821761_-\|glycosyl-hydrolase	gnl\|CDD\|185053	PRK15098, PRK15098, beta-glucosidase BglX.	4.82443e-123
NZ_CP042170.1\|WP_078006787.1\|809434_810454_-\|phenylalanine--tRNA-ligase-subunit-alpha	gnl\|CDD\|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NZ_CP042170.1\|WP_078006994.1\|828668_831158_-\|glycoside-hydrolase-family-2	gnl\|CDD\|225789	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].	4.19576e-74
NZ_CP042170.1\|WP_078006782.1\|817848_819360_-\|cellulase-family-glycosylhydrolase	gnl\|CDD\|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	1.46328e-54

>NZ_CP042170.1|WP_078006995.1|811912_812464_+|CvpA-family-protein
MSFFDIIVAALLAFSLYKGIQNGLFVEIASFISLLLGIYIAIKFSSFMKELIMKHVSWNPNTIQVTAFILTFILVVIGVYFLAKILTGIADFAFLGWANKLGGGFFRILKTILIMSIFIALFEKMNFNETFAKKETLDKYYFYNPIKKVAAFVYPSIEKWYDTFKEHAKSSEEKSNKTTTEKE
>NZ_CP042170.1|WP_078006785.1|811163_811520_-|hypothetical-protein
MSRDTQLKERWEKLVDILSNQFSQGEDLDLDAIIYLIGVQELGKVHREFKKDEKLNLMHIAICRLLEPYGFYEFDFFDAEGWPHYKVKEELPALKAGEQSVLMKEAIVNYFLERELIE
>NZ_CP042170.1|WP_078006786.1|810539_811067_-|hypothetical-protein
MCRYAMVSYKPHYACFNCRKTFKRRLMNDIQRGEKSVQEAKCPECGDLMASMGLDFESPKKDDLKKWEHMKSLYSVGIAFHSCGCSGPGYIPNSKEKIIEYFEDLKTTYLKNIEFWRSRTEPTNKIEKDKEWNKSWAELGKVASKHKKEIIKNEEGITFWLEKVKQIEHKISLIR
>NZ_CP042170.1|WP_078006787.1|809434_810454_-|phenylalanine--tRNA-ligase-subunit-alpha
MIDKIKQHIEEAKAFNDKNKESLEQFRIKYLGSKGLLKELFSEFKNIPNDQKKDFGQVINTLKAVAEEKVRLIQEELESKQEVKGMFGDLTRAAEPVIIGSRHPISIVKNQIIDIFANIGFNVSEGPEIEDDWHNFTALNLPEYHPARDMQDTFFIQTNPDVLLRTHTSSVQVRYMENNKPPIRTISPGRVFRNEAISSRSHCIFHQVEGLYIDKDVSFADLKQTLLYFTKEMFGKSKIRLRPSYFPFTEPSAEIDIYWGLKTETDYRITKGTGWLEIGGCGMVDPNVLKNCDINPDEYNGFAFGMGVERIAMLLYQIGDIRMFYENDVRFLEQFKANI
>NZ_CP042170.1|WP_065448758.1|808909_809317_-|hypothetical-protein
MKADITIPEVENVFIAAVQEWSDDFMEKVWYAYLVNDSDFNLDSVMVVSKAFGTIDGEMKKTSVLRHAFVEVPAVSVVKIEMVEKSLLVLNNEFMVTFFIDNKLYDKKFIFKSNLINENDTEEVPILFVEGVMVK
>NZ_CP042170.1|WP_078006996.1|807585_808725_+|cytochrome-c-peroxidase
MKTKFIAIGIMVLSLIIVSYAKINPTLSISELKRLYSSGDYQKWPKPEVDSLVYAQGFEDIGTLGQPEFPEDNPYTEEKAALGKVLFFDPRLSKSGQISCANCHDPELNWGDARRVSYGEGRLQGIRNSPSLMNIAYAKVFFWDGRAITLEDQASFPIKDTKEMNFHIDLATKRLNKIKGYKPYFQKAFGKEKLTQTEILKAIATFERTLISPKSRFDKFVAGDSTQLTNKEVEGLHLFRTKARCINCHNTANFSDNKFHNIGLTYYGREYEDLGRYNVTGKAENVGEFKTQSLRGVSQNAPYMHNGLFPNLRGVLNMYNAGMPQPKRKESQANDTLFPTTSRLIQKLKLNQSELNALEAFISSLSTGAYKMRPPELPQ
>NZ_CP042170.1|WP_078006788.1|805984_807583_+|hypothetical-protein
MKITTVTLNNTKSNALKYWALLLLFIFSNFSVQAQDTIIVTNHVIDAQLKNQIFKYPVNYTKKHIKDFTFTELSYEYQKNQFARKQIANEINSYQFLAQGYYTTKSKWNFFGNLSLKKTDEKNLGWVLSDDRSEEQEVILPHYFYVPRKANWTNQEYKISGGLSKDITNHISIAAKLNYNTGKYSRNLDPRPEIISRKIGGELQLGYQLKENHKIFALVDYSRSDKDFSYKYKDTHSNVEGNPDTYLRFNTGYGRIINYFKSNYYNSTRFLYKENQNKMGLGYNFSTNNTKFTVLYYNQKSDNNFYSDVFDNPDNERLTIKTTTNHAELFALHKWDKKEIKTTLKFDKSKAQNYDLKNNGYNYKNSLNAISWLSAVSQKTGSHIDYLFGLDVLYQQNQYNDIMATNDIEINSLNTGIFGSRDFSFGKSKLNSTVSFNMYFPLPSKLEYYDTSGGTNAAFLNEVIIHDYVVSTTNYFAPALRLEYSYPVKNNKTVVFFTNFKEKIALKKQNDYNAIINTNTTYWIQCGVQLNY
>NZ_CP042170.1|WP_078006789.1|804665_805973_+|DUF4876-domain-containing-protein
MKKKFLITITFMLGLLIQSCSNNDDEALKLVNLTITLKYDDTFNNLATKKSTVLIVNNETGNKYTVESDNNGIAQFNQILPGIYSVSATKVMHSQEFTETFGYTPTETEVNFNGAEASLVVNTETTPINITMKTSKVGDFVIKQIYYGGSDTKKGAVFRDQFIEIYNNSNTTQYADGLYIAQLYGTNVTTVFAYTLSTGQFDWSKSEEMTIGDDANKNYVYASNVVQIPGNGTQYPIQPGKSIVIAQNAINHQSNYIDNTGKSVSILSPELTVDLSTADFEAFLGTYSGDLYQFDIQNPAVPDLGIAYWGNGNNDLILDPSGRQSFAIFNMNTAEFASLKKYKNPKGDKNLYLQIPSTIITDGVELTKDLGSGLVPKKLPAQVDGGNTYLPSGSYSSKSVMRKTKTTIGGRIILQDTNNSTNDFVETKANPRGFN
>NZ_CP042170.1|WP_078006790.1|801976_804649_+|TonB-dependent-receptor
MRFILFFLLISGSVFSQRVITGKVIDKESSTSLSGVFIRDTKTDNWTISDKDGKFKITLVYYQDVELNFSILGKKDINEIVKNDQNYITVYLEDNTLHLKEVVVTAEKERKYSELTLGTNAINNVQAFSLDDVLQQLPGQTTTDFNLNQFKNIVFRTASEASISYATKAFGTSFVMDDIPISNNENMQAFNPNSGLGDSFGTKTNTFTNTNKGVDLREISTNNIEEIKVIQGIASAKYGDMTSGLVLITTKVGNSPYRISASIRDATSQLNLTKGVKFNINNSMNFGISYLDSKADPRDNILNFKRVNGNISWQYKNNDATVKNTVSTSFRMNLDDAKSDPDDITAVIVKNEKQGFSISNNLMWKPKNLWVDGININASLSYDRQFTRRERWLNTYTSAATDSREEGIHEAIIVPSQYTSISTVEGIPISTFVTLETTKTLTNKSNWIHSLVFGISNRISSNKGEGRKNAATGLFNLYTLGKEGSGTLAYRDYDFDQTKTEYQTSAYLEDRIFKKFENNRLLNVDLGLRFDNQMGSISLQPRINSSYTLNKTFRLRAGGGISSKAPSLNQLYTGDRYFDKLVGSGIYTYPGIYQKAWIQTVITPGDNLNLKPSKSYRTEVGLDVKLPFASVNFTGYYNKLFDGFSGQQVPVYKIIPKAQIIVTGTEIPTYEINGTEKFYYMSNSITNNSSSEDKGLETTINFKKIKALNLDISMNASYTSTKDFSYVKEYYPSSSLLSTELYGVYDKKNYWMDNFTTSFNFNYHIPAVGLLVSVRSEHVLLRNSKSPTGNFLNGYLDTELVYHEIPVEDRTNIQKYGHLIRIPSETQSKLQNVLHNFHLRVSKDFLNGFSVSLYSTNFLNLKPYYYDTSGLKVLSNIAPLTFGASLNYQF
>NZ_CP042170.1|WP_078006791.1|800581_801577_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase
MSENLKFAVIGGGSWATAIAKMLCVNLSEIAWYMRNDAAIEHIQKYKHNPNYLSSVEFDTSKLKLTNNINEAVAYADYVIFAIPSAFLDAELKNLTVSLSDKIIFSAIKGIVPETSLIVGEHFHIQYDIPYYNIGVITGPCHAEEVALERLSYLTIACGDPEKAKVVAKTLSGNYIKAKISDDIIGTEYAAMLKNIYAIAAGIAHGLGYGDNFQSVMMSNGIREMKKFIKKVHKMKRNINDSAYLGDLLVTGYSVFSRNRMFGNMIGKGYTVKSAMMEMSMVAEGYYATKSAYKLNQGYGAKTPIIDAVYAILYDGKDAKSVFKKLTESLD
>NZ_CP042170.1|WP_078006784.1|812827_815233_-|glycoside-hydrolase-family-95-protein
MKSNLIKIFFILLFTTFFTNMTAQSSHVLWYNQPAEFFEESLVLGNGKMGATVFGGANSDKIYLNDATLWSGEPVNAKMNPEAYKNIPAIREALKNENYKLAEELNKKIQGKNSESFAPLGTLEINNSEKGKAVNYRRELDISNATSKVSYELNGVKFTREYFVSALDQIMIIKLTSDHKGALNFDVNLKSLLKSNVEVRSNILVMKGSAPIHENAGYTVLPKYLEAKERGTRFTTLVQIKKTDGKVTSSRESLSLSDATEAIIYVAVSTSFNGFDKNPATEGLDDVSIALQNLNKSYAKSFDQLKESHTKDYQKFYNRVTLDLGKTTAPDLPTDERLLRYADGKEDKNLEILYFNFGRYLLISSSRTLGVPANLQGIWNPHLNPPWSSNYTMNINLEENYWLAENTNLSEMHLPLLGFIKNLSVTGKVTAKTFYGVDKGWAAAHNSDIWAMTNPVGQFGKEDPMWACWPLAGAWLSTHIWEHYIFTQDKAYLKNEGYPLMKGAAEFLLGWMITDKNGNLITSPSTSPENQYLTPDGFVGATLYGGTADLAMTRECFDKTIKASKALNTDADFRGKLETALSKLHPYQIGKKGNLQEWYFDWEDKDPKHRHQSQLFGLFPGDHITPEKTPDLAAASKKTLEIKGDETTGWSKGWRINLWARLWDGNRAYKMFRELLRYVDPDGKKTEKPRRGGGTYPNLFDAHPPFQIDGNFGGAAAVAEMLVQSNENEIRLLPALPDAWETGSVKGICARGGFEIEMNWENKILKKVTVSSKTGGKTTLISGDKKQNITLKKGEKLEVNW
>NZ_CP042170.1|WP_078006783.1|815575_817525_-|hypothetical-protein
MKKNIIFLFIMCSILANANVRMPLLFSDGMVLQRNKEIPVWGWAEPNEKVEVHFNKQTKTIQADKNGKWMITLSAEKAGGPFELSITGKNKIIIKNVLVGEVWICSGQSNMEFQMYKAMNAEKEMADSDYPMIRHFGVAQDLSGTPKEDLKAGKWLVANKENIRDFTAAGFFFAKKLYAELKIPIGIINTSWGGTNVETWTSREAFEKSDDFKSMIADVPQVDMDAVFEVYKRTLLENIRKIQGFDVSMENENQFAAFSFDDKNWPEIKVPSLWENQQIGNIDGVVWMRKTITLTAEQAKSEAVLHLSKVDDEDITYVNGVEVGTNKIWETLRVYKIPAGTLKEGKNVISVRIADYSGGGGIYGDPADLKIQFKDKNIPLEGLWKFNVVQVKIAVSPNSYPSLLYNAMVNPLVPYAFQGVLWYQGEANVWRAKQYKKAFPLMINDWRTKFKQGDFPFYFVQLSTFDEFKGNSKVGSRWAELREAQAETLKLKNTGMVVTTDIGNAKDIHPTNKQDVGLRLAAIALNNVYGKKQIYSGPTFKSQEIKGNQIILTFDNIGSGLSTPDHSENVKGFEIAGPDKVFHSAKAIIKGNKIIVSSDEVKNPVAVHYGWADDDTEINLFNKEKFPASPFRTDNWEMITANEVYKVSK
>NZ_CP042170.1|WP_078006782.1|817848_819360_-|cellulase-family-glycosylhydrolase
MKNTIKSYLFSAMLSLSFLTIWACSSDKDAADPATVEKMLSADTNKIDFLGKGSEAIVKVNANVQAWTITSTNANWLQLSQSSGVKGTVIVKVTALENTTTEARTATLTVSSGEAPSIQIAVSQAAGNPVTGLYPSYNTNPIAADASGMSSTAVQLAAKIKLGWNIGNTLEATNGETAWGNPKVTKALIDAVKASGFNAIRIPCSWNQYLENSATAKIKADWLNRVKEVVQYCVDNNMYVVVNIHWDGGWLENNITEAKKVENNAKQKAFWEQIATQLRGFDEHLLFASANEPAVEDAAQMAILTSYHQTFIDAVRSTGGKNAYRTLVVQGPTTDIEKTNKLMTSLPTDAAANRMMVEVHYYTPWNFAGLTKDETWGKMFYYWGAAYHSTTDTDRNANWGEEADLEKNFKLMKNQFVDKGIPVLLGEFGAIRRTTLSGDALTLHLASRAYYLKTVVKTAKANGLLPFYWDEGSLGDNSFGIINRANNTVSDTQALNAMIEGLQ
>NZ_CP042170.1|WP_078006781.1|819517_821761_-|glycosyl-hydrolase
MKNKMIFLSAAVVFALFTSCKNDAKTEASNSDSEQTEEYTGKEISTDHDAEIDKLISQMTLEEKIGMLHGNSMFANAGVKRLGIPELKMADGPLGVREEISRDNWAPAGLTNDFATYYPAGGALAATWNAEMAHTFGASLGEELRARDKDMLLSPAINMVRTPLGGRTYEYMSEDPFLNKKLSVPLIVGLQEKDVMACVKHYAANNQETNRDFVDVQIDERTLREIYLPAFEASVKEAKAYSIMGAYNKFRGEYLCENDYMLNKILRDEWGFKGVVVSDWAAVHSTAKALKNGLDIEMGTPKPFNEFFLADKLIAAVKSGEVSEKEIDLHVKRILRVLFQVKAMGGGERAKGSIATEAHYQDAYKIAAEAIVLLKNDNNALPLKLDGVKSIAVIGNNAIKKNALGGFGAGVKTKREVTPLEGLKNRLPSSIKINYAEGYLERYDEKNKGNLGNITSTGPVTIDKLDDAKVQEAVEAAKNSDVAIIFAGSNRDYETEASDRRDLHLPFGQEELIRKVTAANPKTIVVMIAGAPFDINEVSQKSSALVWSWFNGSEGGNALADVILGKVNPSGKLPWTMPKQLKDSPAHATNSFPGDKTVNYAEGILIGYRWFDTKNVAPLYPFGYGLSYTTFALDNAKANKESYAQNDVIEVTVDVKNTGKVDGKEVVQLYTSKSDSKITRAAQELKGFKKAAVKAGGSEKVTIKVPVKELAYYDVASKKWTVEPGKYTIKLGTSSRDIKKEIQVTIQ
>NZ_CP042170.1|WP_078006780.1|821847_823413_-|glycoside-hydrolase
MKKLLIIATFLFSSIHLFGQNENRIIKVDYKKEAGKLNKMFKECIGAGRANEGLRADWQQQLALVKKECDFKYIRFHGLLSDDMAVYREDSKGNPEYNYQYIDVLFDYIVSLKMKPFVELGFMPNALASGKETIFWWKGNVTPPKDYKKWEDLIKNLTAHFKERYGDEEVKTWYFEVWNEPNLTPGFWTGTQADYFKLYEYAARGIKAVNPSYKVGGPATAGAGWVPETIDFCVKNNVPLDFISTHTYGVNQGYLDEFGTSGTVLSPDINSVNGDVSNSRKQITNSAKPNLELHYTEWSSSYTPADPIHDSYHSAAYILQKLKQVGNDANSMSYWVFTDIFEEPGPRFTPFHGGFGLLNTQGIKKPAYFSYYLMNKLGETELQNSDKASWTSKNAKGDVQVLLWDFTNTHPGDKVWNQTYYVQDLPSKEKGKVKVEVNGMQKGKYLLEIYKVGYKSNDVYADYLAMNKPSQLTRQQVNSLKEKNNGAPIATEKITIDGKGTFSREFKINENDVFFLNLIKQ
>NZ_CP042170.1|WP_078006779.1|823785_825792_-|glycoside-hydrolase-family-97-protein
MKNYLILPAVLFSVAIGYSQKNKNAYELASPNGKNKIKFELVKNAPKYAVSHGKTEVISPSDMGFLLKGNEDLSSNFEIKGAKTSTFDETWEQVWGEKKNIRNNYNQLVVDLQQKTGNKRKLQIQFRAFDDGIAFRYVYPKQNVKDSIFITDEKTTFNLKEDGKAWWIPANRENRDEYLFKDAPVSTLDTVLTPLTIESKSGLALSFHEANLIDFASMTLVNTKGTELKSDLVPWPDGVKVRVKDTFTSSWRTLQIGENPGELITSYLVLNLNEPNKLKNTASYFKPYKYLGIWWGMHIGKYTFWESDKQGATTKHAEEYIDFTAKEGFHHLLIEGWNKGWTPGWYENRMHMFSFTKSADNFDLEKVVEYGKKKNIELIGYHETGSNLINYLKEVDEGFALYKKLGIHTVKIGHVGSKLNMKQMHFGQFGVNYFRYILEKAAQYDLAVLYHESIKDTGERRTFPNMVSREAARGQEYNAWSEGNPPNHLTIIPFTRLLSGPMDFTPGIFDVEVKQGYPGKRIQGTVGQQLALYVTIYAPIQMLADLPENYEGKPALQFLKDVPTDWEDTKILEGKIGEYITTARKDRNSADWYLGTLTNEKPRNVAISLSFLDPNATYEAQIYVDAEGTDQTHNPEAVAISKKTVKASDVLNLKLGGAGGGAVRFKKL
>NZ_CP042170.1|WP_078006778.1|826027_828427_-|alpha-xylosidase
MKNSKLTTLLSAFMFGFLAVPNASAQIQNADVLNAPIDISKDFQNYLNTFYFADELASFDPATGKGTIKYLRYNYKTRQAFNNMMMKPDVEKANEFPTTEYEESPVLPFEIQFVSDRTVRIKTTSGPQFHPQKESLMLIDGVAPNHPELWKYSKIEGGHSYTSKHGRVEILTKPWHVKIYDEKGKLLTSTLHDTDFKNTYTPTLPFSYVRRNSDYSRSMGAAFSLEPDEKIFGCGESFTQLNKRGQKVVLWADDANGIQNETMYKPIPFYMSSRGYGVFMHHSTPITVDFGKYFSSANEMYIGDDEADLFFFIGEPKDVLDQYTNLTGKAAMPPLWSFGFWMSRITYFSEKEGREVAKDLRKYKIPTDVIHFDTGWFDVDWRNNYEFAKSRFPDATKMMSDLKKDGFQVCLWQLPYFTPKNTLFPEIMDKNLAVRDRKGNLPYEDAVLDFSNPETVTWYQAKLKKLFDEGVAVFKVDFGEAAPPDGIYHSGRTGFYEHNLYPLRYNKAVAEITQKEKGYTLIWARSTWAGSQRYPLHWGGDSETTNGAMSAELRGGLSLGLSGFSFWSHDVGGFATKSPENLYRRWTPFGMLTSHVRSHGEPPREPWLYSKDFLEGFRKADNMRYELMPYIYAQAKESSQKGLPMMRALFVEYPNDPGAWLVDNEYLFGSSMLVAPLFEEVEERDVYLPEGTWIDYQTKKVYQSGWHKIKAGEIPIVVLVKDGTALPHIALAQSTKDMDWSKLTLKVYASDKTTSATAKVFLPDGDAVQEIKVTKNGNNFDVAANPLNGKTTFKTEWIK
>NZ_CP042170.1|WP_078006994.1|828668_831158_-|glycoside-hydrolase-family-2
MKNKRKYFNNGLPLLMLIGIILLGSCSKKEDAFANRKVSFNSDWSFHLNDSIIDKDTIGASTKWRALDVPHDWSIEGNFDEKSPAGYGGGALNGGLGWYKKTFKVAVEDSTKVTSITFDGVYKDSEVWVNGHYLGKRPNGYIGFQYDMSPYLNYGDKNNEIIVKVDNSKQPNSRWYSGSGIFRNVWIETTDKLHVAQWGTYVTTPKVTAQKASIHFETTIQNQNTAAKKATVTTTIFKEDTKVTSVTQNITISANANQTLKQSAEVESPVLWSVEKPELYTAVTEISLDDKIIDQYKTNFGIRDFKFDLNKGFILNGKQVKIKGVCLHHDLGPLGAAINTRAIERQLEIMKEMGVNGIRTSHNPPALELLDLCDKMGFIVMDEAFDMWKQTKTKYDYGNDWDKWHKKDLIDQLLRDRNHPSIFVWSIGNEIPEQWNETGVAIAKELAAITRQYDKTRPLTAAMNPPVNMNIDEVTLQFEKNIVSINPLAASGVLDLIGYNYAHQTYAHHQKNFPNTPFIATETTSGLQTRGYYDAVSDTIKKWPVSWDKKFEGGNPGNTVSAYDQVQTPWGSTHEATWKVIKKHDFLSGMYIWTGFDYIGEATPYEWPSISSYFGIVDLAGFPKDVYYMYQSEWTDKTVLHIFPHWNWKAGQTVDVWAYYNKADEVELFVNGKSVGKRSKKGDDLHVMWRIPFEAGTLKAISRKDGKVVLEKEIKTAGNPSQLKLTADRSTIKADKNDLSFVTVDILDDKGTLVPNANNEINFSLKGNGKIVGVCSGDPVSHEPYKGTKHTALAGKCLVIVQSGNSAERLELTAKANGLKQSTIVITTE
>NZ_CP042170.1|WP_078006993.1|831282_832617_-|hypothetical-protein
MLALMLVSSCSPDSYALDSAMDKSDIHFDITQDLVTDPGGNTVLLKNTTPGVVLNWDYVTGKSNKAEQKVQYAFKGSYTIKISAVTDGGIVELDPVTITVSEDNLNYVNDPLWTALSGGVGHKKSWVLDNGKYGLAQGAMSFADPNTVVEWNKFSPNWEPAGNANSSTDADMHWGRYMTFSLDGGPFMTVHEADGTSIESGAYFLDVNAHTLTTTGATILRPDNYIANASNWTSEIKVLTLTDNQLRIAIKRTNSEGPWWYIWNFVSKEHADTYVPPVTVPVFDEGYNPTFAPGELVTMLTGGAGAGRVWKLDAGGNPVDWVGKGIGWTVDASSSSDWGWNPGWATVAGNSWIRFDQWGGKLNYTRSQNGVVTTGLFTINAATNEINLGTDTLIQNSDSWMSPTVNVIKVVKAYNKDYLQKGIWLGTSYDATKDEWFVFHYIIP
>NZ_CP042170.1|WP_078006777.1|832675_834247_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKNTYLYIFCLSLLSLGSCSLETDPLTPIDTSFYKTKDDAYVALVGCYDGMQVATGGAGMGIPVISEIMSDNCFGGTGNSDGYNYAAIDEFDISRSPGDTDLLNTNWIAYYKGIYRCNMLLSKMDQIEWQGDTALRNTYESETRFIRAYLYFEMTRLWGSVPLLTVPTSENVPQATPEAIYKVIADDLVFASNNLPTEAYNAKPNGRITKWAAKSLLGRVYLYYTGYYGKTDLAGVVTKTQALGHLEDVISSSGHGLVADFSTLWPAASVEKYAGEGNREFIFSIKYTYTSDYNGNTDSNQWMVMFGMREFSSYPYGRGWGVTVNSKLWNAYSATDTRRTASIIGVDEEKIPFDKKNSQREYTGYYNKKYSPMVNKDGVDLPIAMGSQFWDISQFQDYVVLRYSDVLLMAAELGSGNAQRYFDEVRERAYKENFVSLPVNADNILNERRLEFALEGVRYYDLLRQGIGKASSAIAESTTLLNGGVPTTKTISAGKIQETKGLIQIPNTQITLSGGVLKQNAGW

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Crispr_ID: NZ_CP042170_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042170_2

936252-936340

Orphan

Consensus_repeat	Method
GACTGTGACTATAAACTAGATTTCGGTCTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042170_2

>merge|NZ_CP042170|2|936252-936340|CRISPRCasFinder
GACTGTGACTATAAACTAGATTTCGGTCTCAACATTAGTGCAATTCACTGTAAACTGCGACTGTGACTGTAAACTAGATTTCGGTCTCA

>NZ_CP042170|2|2|936252-936340|CRISPRCasFinder
GACTGTGACTATAAACTAGATTTCGGTCTCA	ACATTAGTGCAATTCACTGTAAACTGC
GACTGTGACTGTAAACTAGATTTCGGTCTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042170.1\|WP_078006733.1\|926420_927950_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006727.1\|936382_937201_-\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|234599
NZ_CP042170.1\|WP_078006722.1\|943330_943873_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379547
NZ_CP042170.1\|WP_078006726.1\|937291_938563_-\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP042170.1\|WP_078006725.1\|938925_940335_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP042170.1\|WP_078006720.1\|945068_945533_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006731.1\|929328_929871_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006730.1\|930187_930964_-\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|223422
NZ_CP042170.1\|WP_055094228.1\|933949_934261_-\|DUF4286-family-protein	unknown	unknown	gnl\|CDD\|379477
NZ_CP042170.1\|WP_065451935.1\|942043_942421_-\|PKD-domain-containing-protein	unknown	unknown	gnl\|CDD\|238084
NZ_CP042170.1\|WP_078006724.1\|940392_941937_-\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|366777
NZ_CP042170.1\|WP_078006719.1\|945582_946344_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293828
NZ_CP042170.1\|WP_065451942.1\|933727_933913_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006723.1\|942520_943087_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006721.1\|944107_944491_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_065451944.1\|931064_932414_-\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
NZ_CP042170.1\|WP_056248114.1\|932397_933183_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP042170.1\|WP_078006732.1\|928178_929324_+\|Na+/H+-antiporter-NhaA	unknown	unknown	gnl\|CDD\|377746
NZ_CP042170.1\|WP_078006729.1\|933249_933726_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006728.1\|934352_936134_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350

Protein	Function_ID	Function_description	E-value
NZ_CP042170.1\|WP_078006727.1\|936382_937201_-\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|234599	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed.	2.02383e-81
NZ_CP042170.1\|WP_078006722.1\|943330_943873_-\|hypothetical-protein	gnl\|CDD\|379547	pfam14300, DUF4375, Domain of unknown function (DUF4375). This family of proteins is found in bacteria. Proteins in this family are typically between 156 and 204 amino acids in length. There is a single completely conserved residue G that may be functionally important.	0.00140189
NZ_CP042170.1\|WP_078006726.1\|937291_938563_-\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP042170.1\|WP_078006725.1\|938925_940335_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.55425e-12
NZ_CP042170.1\|WP_078006719.1\|945582_946344_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293828	cd07742, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	2.81944e-107
NZ_CP042170.1\|WP_078006728.1\|934352_936134_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	8.88521e-07
NZ_CP042170.1\|WP_078006730.1\|930187_930964_-\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|223422	COG0345, ProC, Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism].	6.07692e-72
NZ_CP042170.1\|WP_055094228.1\|933949_934261_-\|DUF4286-family-protein	gnl\|CDD\|379477	pfam14114, DUF4286, Domain of unknown function (DUF4286). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 100 and 112 amino acids in length.	4.1174e-43
NZ_CP042170.1\|WP_065451935.1\|942043_942421_-\|PKD-domain-containing-protein	gnl\|CDD\|238084	cd00146, PKD, polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.	0.00421005
NZ_CP042170.1\|WP_078006724.1\|940392_941937_-\|patatin-like-phospholipase-family-protein	gnl\|CDD\|366777	pfam01734, Patatin, Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.	2.2077e-07
NZ_CP042170.1\|WP_065451944.1\|931064_932414_-\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	8.34432e-108
NZ_CP042170.1\|WP_056248114.1\|932397_933183_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.0883e-113
NZ_CP042170.1\|WP_078006732.1\|928178_929324_+\|Na+/H+-antiporter-NhaA	gnl\|CDD\|377746	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1. This family contains a number of bacterial Na+/H+ antiporter 1 proteins. These are integral membrane proteins that catalyze the exchange of H+ for Na+ in a manner that is highly dependent on the pH.	9.75262e-170

>NZ_CP042170.1|WP_078006728.1|934352_936134_-|tetratricopeptide-repeat-protein
MKNIFIYIVLLWSGFAFSQNEQLAQYYYDKGDFEKAKISYEELLKISPSNTQYFLRTIDCYQQLQQFDLAQKVIQDRYNRYKQGVFLVELGYNFQLQKNEAKAKGYYEQAIEKIKTSPNDVYGIGNSFEKKVLLEYALKAYQTAMQIQPNYNFNFQIGMLYGQLGKTDQMIELLLTESYNSPQNANLIQTQLSRFMNGETDNTAFKDAMRKALILRTQKDQDVFWNHYLSWFYVQQKEFGKAFIQEKAIYKREPESLSSIVNLSQFALNEDDTETASEILNFILLNTKDLDLLIQTNSYLMQIKIEKAQEKDYPIINTELQQLLATYEITPFTLSLQIIQAHFLAFNLKKTEEGKAIVKKALELNLNDYQKADAKMELADILLLEEKFNQALIYYSQIQLDLKNDIMAHEASLKAAKTSYYKGDFEWALKQFKELKAANTQLIANDALEYFLLINDNTVADSTQTALKQFAKGDFLIYQNKKTEAIAQFQSILKSFKGQEIEAVTLLRLGKIYESQKDFNSALSQYQQIIDNHSDGIYVDEALFFSAEIYNDELKDTEKAKPLYEKVIFNHQDSIYFVDARKKYRELRGDKNL
>NZ_CP042170.1|WP_055094228.1|933949_934261_-|DUF4286-family-protein
MIIYNVTTNIHESVHDQWLKWMQEKHIPEILATNKFSSARIVRVLIEEEMGGITYSVQYVTDSKETLDQYYIEDEPKFHQEALGLFADKMLSFRTELEVISEH
>NZ_CP042170.1|WP_065451942.1|933727_933913_-|hypothetical-protein
MEIRFQTKEESNKQQQEDFLKLSKVERFYSFLRLSERISRFPVKNKVDKNKDNFIIVIKSK
>NZ_CP042170.1|WP_078006729.1|933249_933726_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MSKLWDQNIDEFIALAAKHNVRMLMVGGGAVNFHGYQRHSADVDFWIETTDENFKKLVLVFNEMGYEIDDFPENVKQQQQNISIKFSPVDLDLELITKFSVNKTFEEAYNDSEETTVNGKTFLKWNVLSLEDLITSKIKANRAKDLLDIQQLREINKK
>NZ_CP042170.1|WP_056248114.1|932397_933183_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MEKVKAKKHLGQHFLKDESIAKAIADTLSLKGYDEVLEIGPGMGVLTKYLLDKPVNTHVIEIDGESVVYLGENYPKLKDKIISQDFLKYNINEVYENKQFAIIGNFPYNISTQIVFRTLEFKHQIPEFSGMFQKEVAERICEKKGSKAYGILSVLAQAFYDTEYLFTVDENVFIPPPKVKSGVMKMTRKEDYSLPCGERLFFTVVKTAFQQRRKTLRNSLKTLNLSDELRLDTIFDKRPEQLSVDEFIVLTQKIEADGVQS
>NZ_CP042170.1|WP_065451944.1|931064_932414_-|magnesium-transporter
MEFKVSKELIHQLEEHIVNKNDKALEVLLNDLHHADIAEILDELDFDEATYIFKVLDSDKTAEILLELEDDLRENILSRLSPKEIAEELDELETNDAADIIGELSQEIKAEVISEMLDVEHAKDIVDLLRYDENSAGGLMGKELVKVNENWNVLTCVKEMRIQAENVSRVHSIYVVDDENRLKGRLSLKDLLTTSTKTQIGDIYIRKLNFVNVDTEDVEVARIMQKYDLEAIPVVDELGRLVGRITIDDILDVIKDEADKDYQLAAGITQDVESNDSVLELTKARLPWLLIGMVIEIVASFVLKGNEATFQKYSTLIIFVPLLSATAGNIGVQASAIVVQGLANGTLKEFSRGYFSKEISVSMISGTIISLLLLAYHSVMYQQYLVGIAISISMIVVILFAATLGTLVPLFLHKNKIDPAIATGPFITTTNDVFGIMLYFGVAKLILGF
>NZ_CP042170.1|WP_078006730.1|930187_930964_-|pyrroline-5-carboxylate-reductase
MKVHIIGGGNLGVSIALGIAKFSKNNQVTVTRRNIASIQYLTEYGITVSSDNKHNIQEADVVILTIKPYQVDTVLAEILPAIQGKTIASAVSGLSLDVLQEKTNNAFPVIRIMPNIAAQFGESATCISFPEKDREKALPIVDLFQDLGTAPVIDEKLMDAATVLGACGTAYALRYIRASMQAGIEIGFDSQTALAIAAQTVKGAAKMLLEEKVHPEQLIDRVTTPQGCTIVGLNEMEHNGFSSSLIKGIKTSLKQIKG
>NZ_CP042170.1|WP_078006731.1|929328_929871_+|hypothetical-protein
MNSISKITAVFVLALLVLACNNKPKPAIEKDASTSKFSLQTNTNKELIEGVYETQPESDNSDECQISIEISKTKTSYSYFLKTKNRELKGIANLTTNESGEKIIVLEGIEWDEYEGDISREEENDSIADSGTNSQELKIPVGIGASYTKDTLTIQNYGNAMNSYTKLSECGRKYIQLIKK
>NZ_CP042170.1|WP_078006732.1|928178_929324_+|Na+/H+-antiporter-NhaA
MKLTKTFKAFFDNEKSGGLLLLFVTIISLYLANSAVQTDYIAFWEKDLGGHSITHWINDGLMTIFFLLIGLELEREIYHGELSSIKNASLPIMAAFGGMLVPAAIFLALNFGTATQNGAGIPMATDIAFAIGILSLLGKRVPASLKVFLTALAVIDDLGAIVVIAIFYTTTIAFVNLAIALGIWGFLFILNRMKIQNLIPYLVGGIAMWYFMLNSGVHATITGVILAFVIPFGDGGEKSSSYKLQHFLHKPVAFVILPLFAIANTCIAIESDWHQGLNHPNTYGIILGLVIGKPLGILLFSSIGVSAGLCALPKSLKWAHILGAGMLGGIGFTMSIFITLLAFKDPEVIVFSKIAILIASVLSGIFGFVYLKYILTRNKTT
>NZ_CP042170.1|WP_078006733.1|926420_927950_-|hypothetical-protein
MNYKIGLSRALILFFILIQISCKKENTQNDGEISEKKTIPVSIDKNYQKDEPITGNEKLKVKSVIHFSKKYNSPELWQYKWDMKTGSLEGVHALANGNMLFVIEESDENRNNTAAFVLILDKEGKEIKKQKLALKPKTKYELFTTEVETDNQGGFTLFIKKEDRTLTQSVEEQTGEGRVRYNLKEYHIDKLKFNNTYSGYETVSKSMESIFLKSFQEKGISYIPTGNFSVEYLKGKICVYGQVGKSEVEQMPFVAILDTNLKLVKINVFDQYVDTKIDKIKLNSDGGLYIEGTENTSADGSYFATNKRFTINSDLKVTTDKSDKEPYESVYRGPSAPEESDEEESETETSATETQESVVEPAKEETWSTVTFYKDEVKKETYNFKQKEMFSNKIIFEKLSSDNTALWQIQFVFPDNYEVPYINSAEGFKRANGDFVFWLYLTEKSNGDEKQSVAIFVINKEGRLIRQFQTPGYAALTEFRMTESNGQLTTGVIKYDSPYVFYSFAYLLD
>NZ_CP042170.1|WP_078006727.1|936382_937201_-|prolipoprotein-diacylglyceryl-transferase
MSNGILNWNVDPVIVMITDSFPLKYYGALFAIGLLLGYYIVRSIYKKEHLSLDNLDSLLVYVIVGTILGARLGHCFFYEPSYFLQHPIEILLPIQKVAGVYKFVGYQGLASHGGSIGVLIAMILYCRKHNVKFLWILDKMAIGVPVTGAFIRFGNFMNSEIYGKPTNGNWGVVFQRDDMIPRHPTQLYEAFAYLLIFGIVLYLYKTEKFKNTDGFIFGCFLTLMFVARFIIEFFKENQEAFENDMIINMGQVLSIPFILIGITLMIWKSKKV
>NZ_CP042170.1|WP_078006726.1|937291_938563_-|serine--tRNA-ligase
MLQIAFIRENQEKVIKALAKRNIDAKSVVEEVVQLDENRRATQVELDNTLSESNKLSKDIGELMKAGEKAKAAILKEKTVSLKEKSKELGEKAEALATELTNLLYTLPNLPADIVPEGKTPDDNLKVFQEGDIPVLHEGAQPHWELVKKYDIIDFELGVKIAGAGFPVYKGKGARLQRALINYFLDKNTAAGYNEVQVPHLVNEASGYGTGQLPDKEGQMYHSTIDDLYLIPTAEVPVTNLFRDVLLSETELPVLYTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRVEHPDKSYEALDGMVEHVKDILKELKLPYRVLRLCGGDMGFTSALTYDFEVFSTAQDRWLEISSVSNFETFQANRLKLRFKDKDGKNQLAHTLNGSSLALPRVLAGILENYQTPEGIVIPEVLRPYCGFDIIN
>NZ_CP042170.1|WP_078006725.1|938925_940335_-|T9SS-type-A-sorting-domain-containing-protein
MNKKIIFALLFLPVFLSAQEKGSDTSDNVSRYFYDDHVVSVEIWYGKDKKPDSTKTYYSNGKLNEIFFYDDQGLKDLNAYQYNKQGEKLVTWNFSHGKLVSRTDHKLPFNKDKEETVKKALKLMTEINIRTNYNPTKVNDLFNRGVLSISLGNTTLALEDLKKVEYSVDKDPKNKDIVLSDSLEKKRAAFRSKLYDRLANIYASLEMDNFAFNYCYKAIRNAPDDLRILYNFAILLQRRKSYDLARFYLEKIVAKKPDHAHAQWALAILYSDTGEYQKAMESITVAFKNEKTIIDKSVGYGGRDLRTTRGLIYHKLGESEKGIADLKYVLDRDKNNSYAMKNLGIIYLDQLQYKEACELFKKADELNYTLVYDEVDLPSLLESACNNVQPEVTALKKPFVYPNPAQTTISIENLKTKNFDFEFFDFESKSALKGKTSDGTINVIALTPGFYILKVTIEDVVETFKVIKE
>NZ_CP042170.1|WP_078006724.1|940392_941937_-|patatin-like-phospholipase-family-protein
MRYKYFQIVLLLFLQTGFSQNKINLFSEINYSSIPSVSLDDYKSVQERDKKFQNPNIALGIGISGGGSRAQFFSMGVLLGLEEIQENNLQRNFLNEIDYFSTVSGGCFSAGYYLTILKNKLFFDNCSFNEFYFSKADAYKDYVDKSANILSLLNNSRNEKGDKISMTQRIDADILQYDATNPDNTNKFGTQMLLSDFFVSKDSKTTPTLPMFVANGTAFNNGERIPFMPHIIRGLNLNSSLAPNKAAISLNENKINGGYDFPLTYAITASSAFPGVLPKVKFGVKNQDKILCIVDGGASDNMGYKTLVELLHNDTKVSDKNKKALFIDCLGQGKKTPYITDAKIRLISLFETASLYTVQTRYMTFDKDVENTFERYKIPVTNYQIIGFTTIRDYLVKMQKDYPYEDLVFELKNTNDEASSWVKLFDTFKQELIMKFGEDSFKKDKDGEIIVATLSKEKFKALSARQVLLLYEYASHVETKLRITPDEREVLLLSGRFAAYLKTNELRELLVEHK
>NZ_CP042170.1|WP_065451935.1|942043_942421_-|PKD-domain-containing-protein
MKSKSPILMIAALFVLSISCSKSDIDKGLDCVGESLFEKVKHSTDATNPKKIDFTVEYSGTNTLKSVKFTFGDGTPAETVTATGTTVSTSHIYSAAGTYTAKAEITVQNGGATCTSSPTRSITVN
>NZ_CP042170.1|WP_078006723.1|942520_943087_-|hypothetical-protein
MEELTHIKSIIGIILGLSLTHLIKGSVIFIQHPGRKKIYFVHSLWVFYVFLLIIHFWWWEFNLKLIHEWYFADYFFIICYILIYYLLCAILYPDDLVDYTGYEDYFYSRKNWFFVILAISFGADIIDTAIKGGNYFLYNQTEYYIRIISHIILCLAAIKIHNKVFHSVLVILFIIYELSYILRLFNVE
>NZ_CP042170.1|WP_078006722.1|943330_943873_-|hypothetical-protein
MEEFGRILVSETAMNSENLQDVIHSNISVINLMREEGVDDEFIHEDALMSYYLDYYYSQYAEGNFSQFVYKSGWNKELNELIEEGLALIGAEKHLELFQQQSKKVKLMSSVKLNKFVSGKLEGVNPVRDSLNNDTFFELEENLITLNANFLKNHPDFEVLSVDDMFAALDEYVGHEIKRA
>NZ_CP042170.1|WP_078006721.1|944107_944491_+|hypothetical-protein
MKETIYKSLLLPLLITNLWATITFFVYYFETGLFSGFKTLLLFGWSCWISSGLGLLVILISLLKTWKSNQSKVFTLVLTGWLNIFFSFLLITTTFFEIIVPESFIYSFYIVNLIIPIVVYFRTKKDY
>NZ_CP042170.1|WP_078006720.1|945068_945533_+|hypothetical-protein
MFSISVLGQNENNKTMTSFVPKSKAYDIYYPKTFVLNEDNEGIVTITDATSELNITISSYGFDQETTDEKLIQQLTEFVKNYHTKEITRENWNSYKTKFDILVELKVSDEKANWVWWGVVNKKQLVLISINKKTPISSEDTNLLQFMINNMIIN
>NZ_CP042170.1|WP_078006719.1|945582_946344_+|MBL-fold-metallo-hydrolase
MPQIHHLNCVKIVSPVNDNVCGHCLLIQENDKLILVDTGIGLLDIQNPEERIGQQLIDMVGYRFNENQTAIKQIEKLGLDPKKVTDCVISHLDNDHIGGLADFPNATVHVGLEECDAYISGNPRYLKTPLSHQPTIKTYEKLDLNWFGFEARKVDIDTDTAIFLIPLFGHTLGHCGVAVKTEKGWLFYIADAYYMRIELTNSEHPVNQLAKMRAEDNDLRLSTLDKIRNLINEHPEIEVFGYHDIEEFNFYKN

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Crispr_ID: NZ_CP042170_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042170_3

1381006-1381102

Orphan

Consensus_repeat	Method
TTTTATTTTAGATTTTAGATTTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042170_3

>merge|NZ_CP042170|3|1381006-1381102|CRISPRCasFinder
GTTCCATTTTTATTTTAGATTTTAGATTTTAGATTTTAGATTTTTTCAATCTTTGTCCTTAATCCATATTCTGCAATCTCTTTTATTTTAGATTTTA

>NZ_CP042170|3|3|1381006-1381102|CRISPRCasFinder
GTTCCATTTTTATTTTAGATTTTA	GATTTTAGATTTTAGATTTTTTCAATCTTTGTCCTTAATCCATATTCTG
CAATCTCTTTTATTTTAGATTTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042170.1\|WP_065451600.1\|1381159_1382398_-\|NADH-quinone-oxidoreductase-subunit-D	unknown	unknown	gnl\|CDD\|223722
NZ_CP042170.1\|WP_065451603.1\|1377997_1379029_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|273904
NZ_CP042170.1\|WP_065451610.1\|1369644_1370418_-\|Bax-inhibitor-1/YccA-family-protein	unknown	unknown	gnl\|CDD\|378959
NZ_CP042170.1\|WP_007137066.1\|1384259_1384454_-\|cold-shock-domain-containing-protein	unknown	unknown	gnl\|CDD\|239905
NZ_CP042170.1\|WP_078006469.1\|1386202_1388395_-\|peptidase-domain-containing-ABC-transporter	unknown	unknown	gnl\|CDD\|225183
NZ_CP042170.1\|WP_078006472.1\|1372039_1373479_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235622
NZ_CP042170.1\|WP_078006470.1\|1384914_1386201_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP042170.1\|WP_026982591.1\|1375379_1375700_-\|NADH-quinone-oxidoreductase-subunit-NuoK	unknown	unknown	gnl\|CDD\|180218
NZ_CP042170.1\|WP_065451598.1\|1382945_1383494_-\|NADH-quinone-oxidoreductase-subunit-B	unknown	unknown	gnl\|CDD\|184833
NZ_CP042170.1\|WP_078006466.1\|1390454_1391138_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	unknown
NZ_CP042170.1\|WP_065451604.1\|1376939_1377995_-\|NADH-quinone-oxidoreductase-subunit-NuoH	unknown	unknown	gnl\|CDD\|376297
NZ_CP042170.1\|WP_078006467.1\|1389271_1390411_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006468.1\|1388471_1389275_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP042170.1\|WP_078006473.1\|1370583_1371975_-\|NADH-quinone-oxidoreductase-subunit-N	unknown	unknown	gnl\|CDD\|235603
NZ_CP042170.1\|WP_065451599.1\|1382422_1382944_-\|NADH-quinone-oxidoreductase-subunit-C	unknown	unknown	gnl\|CDD\|376317
NZ_CP042170.1\|WP_065451605.1\|1376239_1376785_-\|NADH-quinone-oxidoreductase-subunit-I	unknown	unknown	gnl\|CDD\|235637
NZ_CP042170.1\|WP_078006471.1\|1373489_1375373_-\|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl\|CDD\|235836
NZ_CP042170.1\|WP_065451606.1\|1375699_1376239_-\|NADH-quinone-oxidoreductase-subunit-J	unknown	unknown	gnl\|CDD\|235844
NZ_CP042170.1\|WP_065451602.1\|1379112_1380480_-\|NADH-quinone-oxidoreductase-subunit-NuoF	unknown	unknown	gnl\|CDD\|131014
NZ_CP042170.1\|WP_065451597.1\|1383651_1384017_-\|NADH-quinone-oxidoreductase-subunit-A	unknown	unknown	gnl\|CDD\|376344

Protein	Function_ID	Function_description	E-value
NZ_CP042170.1\|WP_065451600.1\|1381159_1382398_-\|NADH-quinone-oxidoreductase-subunit-D	gnl\|CDD\|223722	COG0649, NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 [Energy production and conversion].	4.03576e-168
NZ_CP042170.1\|WP_065451603.1\|1377997_1379029_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|273904	TIGR01973, NADH-quinone_oxidoreductase_subunit_G, NADH-quinone oxidoreductase, chain G. This model represents the G subunit (one of 14: A->N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria while translocating protons, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This model excludes related subunits from formate dehydrogenase complexes. [Energy metabolism, Electron transport].	7.79195e-95
NZ_CP042170.1\|WP_065451610.1\|1369644_1370418_-\|Bax-inhibitor-1/YccA-family-protein	gnl\|CDD\|378959	pfam12811, BaxI_1, Bax inhibitor 1 like. The Bax-inhibitor-1 region of the receptor molecules is conserved from bacteria to humans.	1.1163e-90
NZ_CP042170.1\|WP_007137066.1\|1384259_1384454_-\|cold-shock-domain-containing-protein	gnl\|CDD\|239905	cd04458, CSP_CDS, Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein. CSP expression is up-regulated by an abrupt drop in growth temperature. CSP's are also expressed under normal condition at lower level. The function of cold-shock proteins is not fully understood. They preferentially bind poly-pyrimidine region of single-stranded RNA and DNA. CSP's are thought to bind mRNA and regulate ribosomal translation, mRNA degradation, and the rate of transcription termination. The human Y-box protein, which contains a CSD, regulates transcription and translation of genes that contain the Y-box sequence in their promoters. This specific ssDNA-binding properties of CSD are required for the binding of Y-box protein to the promoter's Y-box sequence, thereby regulating transcription.	2.56461e-22
NZ_CP042170.1\|WP_078006469.1\|1386202_1388395_-\|peptidase-domain-containing-ABC-transporter	gnl\|CDD\|225183	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms].	0
NZ_CP042170.1\|WP_078006472.1\|1372039_1373479_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235622	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed.	9.63239e-144
NZ_CP042170.1\|WP_078006470.1\|1384914_1386201_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	1.20845e-17
NZ_CP042170.1\|WP_026982591.1\|1375379_1375700_-\|NADH-quinone-oxidoreductase-subunit-NuoK	gnl\|CDD\|180218	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK.	3.56164e-41
NZ_CP042170.1\|WP_065451598.1\|1382945_1383494_-\|NADH-quinone-oxidoreductase-subunit-B	gnl\|CDD\|184833	PRK14820, PRK14820, NADH-quinone oxidoreductase subunit B.	1.65281e-134
NZ_CP042170.1\|WP_065451604.1\|1376939_1377995_-\|NADH-quinone-oxidoreductase-subunit-NuoH	gnl\|CDD\|376297	pfam00146, NADHdh, NADH dehydrogenase.	1.40934e-135
NZ_CP042170.1\|WP_078006468.1\|1388471_1389275_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	9.58227e-07
NZ_CP042170.1\|WP_078006473.1\|1370583_1371975_-\|NADH-quinone-oxidoreductase-subunit-N	gnl\|CDD\|235603	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN.	2.49422e-106
NZ_CP042170.1\|WP_065451599.1\|1382422_1382944_-\|NADH-quinone-oxidoreductase-subunit-C	gnl\|CDD\|376317	pfam00329, Complex1_30kDa, Respiratory-chain NADH dehydrogenase, 30 Kd subunit.	8.20798e-48
NZ_CP042170.1\|WP_065451605.1\|1376239_1376785_-\|NADH-quinone-oxidoreductase-subunit-I	gnl\|CDD\|235637	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI.	3.77369e-53
NZ_CP042170.1\|WP_078006471.1\|1373489_1375373_-\|NADH-quinone-oxidoreductase-subunit-L	gnl\|CDD\|235836	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed.	0
NZ_CP042170.1\|WP_065451606.1\|1375699_1376239_-\|NADH-quinone-oxidoreductase-subunit-J	gnl\|CDD\|235844	PRK06638, PRK06638, NADH-quinone oxidoreductase subunit J.	4.52206e-40
NZ_CP042170.1\|WP_065451602.1\|1379112_1380480_-\|NADH-quinone-oxidoreductase-subunit-NuoF	gnl\|CDD\|131014	TIGR01959, NADH-quinone_oxidoreductase_subunit_F, NADH-quinone oxidoreductase, F subunit. This model describes the F chain of complexes that resemble NADH-quinone oxidoreductases. The electron acceptor is a quinone, ubiquinone, in mitochondria and most bacteria, including Escherichia coli, where the recommended gene symbol is nuoF. This family does not have any members in chloroplast or cyanobacteria, where the quinone may be plastoquinone and NADH may be replaced by NADPH, nor in Methanosarcina, where NADH is replaced by F420H2. [Energy metabolism, Electron transport].	0
NZ_CP042170.1\|WP_065451597.1\|1383651_1384017_-\|NADH-quinone-oxidoreductase-subunit-A	gnl\|CDD\|376344	pfam00507, Oxidored_q4, NADH-ubiquinone/plastoquinone oxidoreductase, chain 3.	2.60489e-40

>NZ_CP042170.1|WP_065451602.1|1379112_1380480_-|NADH-quinone-oxidoreductase-subunit-NuoF
MSQKILLDKINIPGIKTYEVYRQNGGYASVEKALKTLTPDEVTEEVKKSGLRGRGGAGFPAGMKWSFIDKKSGKPRHLVCNADESEPGTFKDRYLMEYIPHLLIEGMITSSFALGANLSYIYIRGEYMWVYKILERAIAEAKAAGWLGKNILGTGYDLELYVHCGAGAYICGEETALIESLEGKRGNPRIKPPFPAVSGLWANPTVVNNVETIATVPWIINNSGDDYAKIGIGRSTGTKLISASGHIKNPGVYEIELGLSVDEFMNSDEYLGGMSSSRPLKAFVPGGSSVPILPAELIFKTANGEDRLMSYESLSDGGFATGSMLGSGGFIVYNDTACVVRNTWNFARFYHHESCGQCTPCREGTGWLEKILWRIENGQGREEDIELLWSIQSKIEGNTICPLGDAASWPVAAAIRHFRDEFEYHVRFPEKIKNRDHFVAEPFSQVKHLVGKQTV
>NZ_CP042170.1|WP_065451603.1|1377997_1379029_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MKVTIDGQSIDVEPGTTILQAARMIGGDLVPPAMCYYSKLKGSGGKCRCCLVEVSKGSEADPRPMPKLMASCVTGCMDGMEVNSKSSARVTEARKSVTEFLLINHPLDCPICDQAGECDLQNLSFEHGNPKSRFIEEKRTFEPEDIGPNIQLHMNRCILCQRCVQVADQLTDNRVHGVLDRGDHANISTGISKAIDNEFSGNMIDVCPVGALTDKTFRFKSRVWFNKPYNAHRECTTPGCCGKTTVWMFGGEIQRVTGRKDEYHEVEEFICNSCRFEHKNVNDWVIEGPREFEKDSVINQNNYTQKLEKVEIDTEKTILMGRDEDRKKISMAEIPLNTNNKNS
>NZ_CP042170.1|WP_065451604.1|1376939_1377995_-|NADH-quinone-oxidoreductase-subunit-NuoH
MVDGTFIIEKSVVIVVVFAITMIMAMYSTWAERKVAAYLQDRVGPNRAGWGGLLQPLADGMKLFSKEEFFPNTPNKFLFVVGPAIAMSTALMTSAVIPWGDKLHIFGRDVLLQATDINIGILYIFGVLSIGVYGIMIGGWASNNKFSLMGAVRAASQMVSYEVAMGLSMIALLMMTGTLSLREISLQQQEMNWNVFYQPLSFLIFLICSFAETNRTPFDLAECESELIGGYHTEYSSMKMGFYLFAEYASMFISATIISVLFFGGYNYPGMSWMVEHAGVNIANLLGIAALFAKLCFFIFFYMWVRWTIPRFRYDQLMNLGWRILIPLSIINIMITGAVILRHDIAAALGF
>NZ_CP042170.1|WP_065451605.1|1376239_1376785_-|NADH-quinone-oxidoreductase-subunit-I
MSIETISLSGRKKMVSNKEMTFWERLYLVAIVKGLYITLKHLFRKKVTIHYPEQVREMSPVYRGQHQLKRDEQGRENCTACGLCALSCPAEAITMKAAERKADEKHLYREEKYASIYEINMLRCIFCGLCEEACPKDAIYLTTSKVLVPASYEREDFIFGKDRLVMPLDVAIKNAQLNNAN
>NZ_CP042170.1|WP_065451606.1|1375699_1376239_-|NADH-quinone-oxidoreductase-subunit-J
MIHIPDFAHATTVQIIFCFLAFITVITAFLTIFSRNPIHSAIYLVICFFSIAGHYLLLNAQFLAIVHLIVYSGAIMILFLFTIMLMNLNERHQVHRPRITRLGAIVSFCLICVVLIAIFINSKPIVGEYDSTGEDFQSIKVLGKILLNEYMVPFEFASVLLLVAMIGTVLLSKKEKLNK
>NZ_CP042170.1|WP_026982591.1|1375379_1375700_-|NADH-quinone-oxidoreductase-subunit-NuoK
MGNILNQIGIENYIFLSVVLFCIGVFGVLYRRNAIIVFMSIEIMLNAVNLLFVAFSTYHQDAQGQVFVFFSMAVAAAEVAVGLAILVSIFRNLGSISIDNLKNLKG
>NZ_CP042170.1|WP_078006471.1|1373489_1375373_-|NADH-quinone-oxidoreductase-subunit-L
MDTNLALLLVLSPFLGFLINVFFGKNLGKTVSGAIGTIAVVISFIVSLLLFNQITSTGKAIEVTLFDWIQISNLKINLGFLLDQLSVLWLLFVTGIGSLIHLYSISYMHDDENMHKFFSYLNLFIFFMITLVIGSNLLVLFIGWEGVGLCSYLLIGFWHKNQDYNDAAKKAFIMNRIGDLGLLIGMFILGSMFSTLDYATLKTAIAGATNLNLPLLSLAALCLFIGACGKSAQIPLYTWLPDAMAGPTPVSALIHAATMVTAGIFMVTRLNFVFDLAHDVQNLIAIVGAVTSLVAATIGLVQTDIKKVLAYSTVSQLGLMFLALGLGAYEVAVFHVITHAFFKACLFLGSGSVIHGLHGEQDMRKMGGLRKAMPITFWTMLISSLAISGVPFFSGFFSKDEILLTAFHKSIPLYVVGSIASIMTAFYMFRLMFLTFFKEFRGTEEQKHHLHESGSLITIPLIILAILATFGGLISLPGNSWLNEYLAPLFTKVAGEEHHLGTTEYTLMGVAVLGGLLGILIAYIKYFKQDNVPEADENITGLTKVLYNKYYVDEAYDAVFVRSINGLSRFFRDYIETGLSALVFGLGKVTNEIAFQGKKLQNGSIGLYLFAFVLGLCAIVSYIFLAK
>NZ_CP042170.1|WP_078006472.1|1372039_1373479_-|NADH-quinone-oxidoreductase-subunit-M
MNVSLILIILLIGAFVTYFAGDKLASKVALFFSLAALGCSIVLLNHFYAGENISLINTWITKPNISFALNADGLGIAMLLLTVALTPIIIFSSFGNEYKNAKGFYALILFMAFAMIGTFLAADGLLYYIFWELALIPIYFIALIWGNGDAEERRKAVVKFFIYTLAGSLFMLIAFIYLYQKAGTFLIEDLYKLNLSASEQLWIFLAFFLAYAIKIPIIPFHTWQANVYQKAPTVGTMLLSGIMLKMGLYSVIRWQLPIAPLAAKEYMNIFIALGIAGVIYGSIVALRQRDLKKLLAYSSLAHVGLIAAGTYTLTIDGLRGAVLQMIAHGFVVVGLFFAGEVIFRRFETREIGELGGIRTQSPKFTSMFLILVLASVALPGTFNFVGEFTVLYSLSQINIWFAVLGGTTIILGAYYMLKMFQNVMLGETNSKTFADVSVNEGISFVVIIAVLILFGFYPKPITDLITPSLETILNVINKN
>NZ_CP042170.1|WP_078006473.1|1370583_1371975_-|NADH-quinone-oxidoreductase-subunit-N
MNTLIAITGLGIFCLLFEILNLRKAIVPITIIGLLGVLAINYYEFGSTASYYSNMITVSKFSTTFSSLFIILTIFLVALSHNFYENHPTKISDFVAIKIFLLAGGVAMVSFGNLAMFFLGIEILSIALYVLAASERLNLKSNEAGMKYFLMGSFASGIILFGICLIYGAMGTFDVAEIHESSLSAELPIWFPIGMILMIIGMLFKVAAVPFHFWAPDVYEGSPALTTALMSTLAKVVAIATLYKLVSALNFVPSLDNQDLLGTFETIVVIISIASMTVGNIMALRQVNVKRMLAFSGISHAGFMLMTLLTVATSAGVLLYYTAAYALAGIAAFSVILYVCKNQDNEDITNFHGLGKTNPLLAAILTGSLLSMAGIPIFSGFFAKLFLFNQTIEAGYIALVIVAVINSIISVGYYFKLILAMYSKEPNQERTGKPFLIYAVAVISITLNIVLGLFPSLVLDLLN
>NZ_CP042170.1|WP_065451610.1|1369644_1370418_-|Bax-inhibitor-1/YccA-family-protein
MNFNSKNPFLSNKRFSSNAVSKAEEVHQAQIIDYNQEMTLSGTINKTAILFLILCGSAMVTWWMAFNGMNALLPAIGGAIIGFILVLVSVFKPHLSPYLAPGYALFEGLFIGGISAIFEAKYPGIVINAVSATLVTFLVCLGLYKFKIVKVTEQFKSVVIAATLAIATYYLISWIASLIFNFTPVHYGNGMMSIGISVFVIIIAALNLFLDFDQIEKGVQERMPKFMEWYGAMGLMITLVWLYIEFLRLLSKLSSKD
>NZ_CP042170.1|WP_065451600.1|1381159_1382398_-|NADH-quinone-oxidoreductase-subunit-D
MSELLLPPEHRYAKIVKDKLNEDGSELSVLNLGPTHPATHGIFQNILLMDGERILEAEPTIGYIHRAFEKIAENRPFYQITPLTDRMNYCSSPINNMGWWMTLEKLLNIEVPKRAQYLRVIVMELARITDHLICNSILGVDTGAYTGFLYVFQFREKVYEIYEEICGARLTTNMGRIGGFERDWSPEAFRKLDAFLEEFPVAWQEFVNLFERNRIFLDRTVDVGAISAEQAMAYGFTGPNLRAAGVDYDVRVAQPYSSYEDFDFVVPVGKSGDTYDRFCVRNAEVWESLSIIRQALDKMPAGNEYHAEVPDYYLPPKEDVYTSMESLIYHFKIVMGEVPVPVAEIYHPVEGGNGELGFYLVTDGSRTPYRLHFRRPCFIYYQAYPEMIKGALLSDAIVILSSLNVIAGELDA
>NZ_CP042170.1|WP_065451599.1|1382422_1382944_-|NADH-quinone-oxidoreductase-subunit-C
MALENTLIQDKLTETFDSSVFNFHEERDVFTLEASADKITALILFLKNDADLRFHFLTDLCGVHYPDNETDRQFAIVYHLHNWYENKRIRIKVFLNGEKPEIKTISNIFLSSNWMERETYDFFGVNFIGHPQLKRILNMDEMVSFPMRKEFPMEDSGRTDKDDRFFGRTTTNC
>NZ_CP042170.1|WP_065451598.1|1382945_1383494_-|NADH-quinone-oxidoreductase-subunit-B
MSNSNVNMVAPPEGVVGEGFFATKLNDVVGLARANSLWPLPFATSCCGIEFMATMASHYDLARFGSERVSFSPRQADMLLVMGTISKKMAPILRQVYEQMSEPRWVIAVGACASSGGIFDTYSVLQGIDKVIPVDVYVPGCPPRPEQIVDGVMRLQELVKSESVRRRSSPEYQELLASYNIS
>NZ_CP042170.1|WP_065451597.1|1383651_1384017_-|NADH-quinone-oxidoreductase-subunit-A
MQSDQYNYIPILMQFILAVGFVVGTIIISGKLGPKRSSETKDKNFECGVESVGNARIPFSVKYFLVAILFVLFDVEVIFLYPWAVNFKELGVEGMLKMIVFMSLLLVGFFYIIKKKALDWE
>NZ_CP042170.1|WP_007137066.1|1384259_1384454_-|cold-shock-domain-containing-protein
MRTGTVKFFNESKGYGFITDEETGKDIFVHASGINAEELREGDRVSYEEEEGRKGKVAAKVAVI
>NZ_CP042170.1|WP_078006470.1|1384914_1386201_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MEELNDGLKIYSEEVRDVLSAPPISIQKWGNTILLLFIMILFLISWFIKYPDIITSQITITTNTPPQKVVAKVSGRIEAILVKDKIFVKQNTALAILENSAKYQDVLFLKSILDTINIDKIKFPFEKLNSAQLGEVESAFSNFRKEYIADQLNSELQPYRVEESAQNYEAIQLRERLNLLKSQKEINQNELILQKSELNRYEILFQKGIYSSQEIEKQQLIYLQAQKSYKTLLSTISQIKSSLNELTRNTKTTHINESRESINLENNKIQAFYQLKKAIKDWELNYLLKSSINGKISFLQIWSKNQSIESGSTIFAIIPSKENGYIGKVKAPALNSGKIKTGQKVNIKLANFPDREFGMIKGRIETISLTPDKEGDLLIDVSLPDGLETSYQKTIPFQQEMQGNADIITEDLRLIERLLYQFRDLFKR
>NZ_CP042170.1|WP_078006469.1|1386202_1388395_-|peptidase-domain-containing-ABC-transporter
MIKKKFPHFKQLDNKDCGPTCLRMIAKYHGKTFSREFLRDKANITKIGVTMAGIAEAAETIEMRTLGMRISLESLITEAPTPFIVPWRQKHFVVVYKTSKTKIWIADPAQGLLTYSHEDFRNAWTDTIDTTGFILILEPNAKFNKQDDYKENSNGFSFLYPYFKPYKKLIYQIFIGLCIAAIIQFILPFLMQSIVDVGVNNQNIPFIYLILVSQFVLILSQTLVSVFREWILIHITSRFNIKMISDFLYKMLKLPVNYFETRNSGEHLQRITDHTRIQNFISSSSLNMIFSIVTFLIFNAILVYYNLTIFLVFLIASSLYVGWTFFFLKQRAELDFKRFDQLSQNQTSLIQIINGVKEIKINNSQRKNRWKWEFNQISLYKTSLSTLKLAQYQTIGANFINEFKNIIITFLSAKAVIDGNLTLGMMTSIQFIVGQLNMPLGNFVLFIQSWQDAKISLERLAQVHLSDDEDVPSTHKAKELPKDKSIILKDLSYRYGGKSSPLILKNINCIIPEGKTTAIVGASGSGKTTLMKLLLKFYNPTAGSINIGPVNLDDIYNDFWRLNCGAVMQDTFMFNDTIGGNISESEQNEIINRDKLNNAAFVANIEDFIEKLPNKYNTELGTSGIRLSGGQEQRIMIARAVYKDPFYLFFDEATSALDANNEKVIMENLNNFIRGKTAIIVAHRLSTVKSADNIIVLENGEIVEHGNHNDLVKLKGKYYELVKNQLELGN
>NZ_CP042170.1|WP_078006468.1|1388471_1389275_-|tetratricopeptide-repeat-protein
MKNIILIIFINITQFIYPQNSPAIKRTQDAIILEHLTNCAERYNYNYQMAEWQNCLDKGLKKDSTISYLWQQKAMPYFKAQKYEVGLQYIDKAVFYAPQEWQPYRAFIKCIFAKIYKDAIIDFQDCINKYGNGYIMDHSYSFYIGLCYLQLNEYEKAEKIFKEYNDNLFKNRDGLEHPTALFYYGIAKYELKEWTEAILLFDKALKIYPTFSDAKQYKSICMIKLGANREEIKILFTQAKEDAKLGYTINEDNTIYEFYPYQVRWKF
>NZ_CP042170.1|WP_078006467.1|1389271_1390411_-|hypothetical-protein
MLNIQSCQTEIINTIKLLIYKENPSLLEKIDFDDDTLFLEPLLFFYFNQKVDFLLPDGLLPELIQGYFLNKYELNINHSFYKNEITYLPKLGYFKKNETTFSDPIYLIENTDIEVLKYSGNLLRNIFTDISGNLISDCDIILDITLFEKNIAYLTNAVTFIKENSNDHFQLIEKCCKKILLFKSEPTNTNSFASIKAHGIAFLNVYQDEYDEVFFIDDIAHQTGHIILTTLFYNRKTIFKINEEQDVEDILKLKDHRTIYILLHALYTYYTTFLCLDNCLKNNKFNKQQEKEAIGRIGFYLNKCYFDLNRFEKINLFYKGIDNVLTEDGKEIYNLITRKYLEISQKWQSTTNNFDYSNQPYNFTFKLFDKLNALERTQL
>NZ_CP042170.1|WP_078006466.1|1390454_1391138_-|CPBP-family-intramembrane-metalloprotease
MIKTFFEDFKNVFSSPDLICCNNNKFKESISYFLIIQFFFFVTSFLTFIIANKFKLIIHYDSLKFFFFNVVIIAPLKEELLLRSFLKKSKINIILFLSMLTCFFLDHSIDNKFMIYVVSFSSIPIYYFLLSFCIKKTYFLKPYSKNQLLILVYSSSILFGLAHIVNFQFNINELSIKLLVLLIIVSIPKIFGAFLFAMYRIKFGILPSFLLHAFNNLLGYSLIHLLK

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Crispr_ID: NZ_CP042170_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042170_4

1454947-1455020

Orphan

Consensus_repeat	Method
CTTCCTTTTCCGTCTCCTTTAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042170_4

>merge|NZ_CP042170|4|1454947-1455020|CRISPRCasFinder
CTTCCTTTTCCGTCTCCTTTAGATGGGTCAATAGACTGAGACTGCAATGTACTTCCTTTTCCATCTCCTTTAGA

>NZ_CP042170|4|4|1454947-1455020|CRISPRCasFinder
CTTCCTTTTCCGTCTCCTTTAGA	TGGGTCAATAGACTGAGACTGCAATGTA
CTTCCTTTTCCATCTCCTTTAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042170.1\|WP_078006432.1\|1453021_1454779_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
NZ_CP042170.1\|WP_078006433.1\|1450803_1451586_-\|DUF3050-domain-containing-protein	unknown	unknown	gnl\|CDD\|378614
NZ_CP042170.1\|WP_065451546.1\|1457525_1457735_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006437.1\|1445556_1447077_+\|polyamine-aminopropyltransferase	unknown	unknown	gnl\|CDD\|235139
NZ_CP042170.1\|WP_078006426.1\|1462540_1463254_-\|methyltransferase	unknown	unknown	gnl\|CDD\|226608
NZ_CP042170.1\|WP_123921771.1\|1455228_1455354_-\|rSAM-modified-peptide	unknown	unknown	unknown
NZ_CP042170.1\|WP_065451544.1\|1458042_1458234_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_065451555.1\|1445348_1445564_+\|DUF350-domain-containing-protein	unknown	unknown	gnl\|CDD\|377187
NZ_CP042170.1\|WP_078006429.1\|1457273_1457453_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006438.1\|1443922_1445152_+\|DUF4178-domain-containing-protein	unknown	unknown	gnl\|CDD\|379368
NZ_CP042170.1\|WP_065451545.1\|1457771_1457984_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|177443
NZ_CP042170.1\|WP_078006435.1\|1448657_1449695_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_065451543.1\|1458592_1458781_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078006436.1\|1447051_1448680_+\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|379192
NZ_CP042170.1\|WP_065451542.1\|1459056_1461249_+\|peptidase-domain-containing-ABC-transporter	unknown	unknown	gnl\|CDD\|225183
NZ_CP042170.1\|WP_078006969.1\|1443556_1443919_+\|adenosylmethionine-decarboxylase	unknown	unknown	gnl\|CDD\|376892
NZ_CP042170.1\|WP_078006430.1\|1455615_1457178_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240604
NZ_CP042170.1\|WP_078006434.1\|1449974_1450736_-\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238870
NZ_CP042170.1\|WP_065451550.1\|1451674_1452853_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173840
NZ_CP042170.1\|WP_078006427.1\|1461251_1462544_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|366149

Protein	Function_ID	Function_description	E-value
NZ_CP042170.1\|WP_078006432.1\|1453021_1454779_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	2.66181e-12
NZ_CP042170.1\|WP_078006433.1\|1450803_1451586_-\|DUF3050-domain-containing-protein	gnl\|CDD\|378614	pfam11251, DUF3050, Protein of unknown function (DUF3050). This bacterial family of proteins has no known function.	3.7534e-147
NZ_CP042170.1\|WP_078006437.1\|1445556_1447077_+\|polyamine-aminopropyltransferase	gnl\|CDD\|235139	PRK03612, PRK03612, polyamine aminopropyltransferase.	0
NZ_CP042170.1\|WP_078006426.1\|1462540_1463254_-\|methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	1.28181e-60
NZ_CP042170.1\|WP_065451555.1\|1445348_1445564_+\|DUF350-domain-containing-protein	gnl\|CDD\|377187	pfam03994, DUF350, Domain of Unknown Function (DUF350). This domain occurs in a small set of of bacterial proteins. It has two transmembrane regions, and often occurs as tandem repeats. The are no conserved catalytic residues.	3.52298e-09
NZ_CP042170.1\|WP_078006438.1\|1443922_1445152_+\|DUF4178-domain-containing-protein	gnl\|CDD\|379368	pfam13785, DUF4178, Domain of unknown function (DUF4178).	5.35263e-10
NZ_CP042170.1\|WP_065451545.1\|1457771_1457984_+\|hypothetical-protein	gnl\|CDD\|177443	PHA02653, PHA02653, RNA helicase NPH-II; Provisional.	0.00272568
NZ_CP042170.1\|WP_078006430.1\|1455615_1457178_+\|hypothetical-protein	gnl\|CDD\|240604	cd12921, VKOR_4, Vitamin K epoxide reductase (VKOR) family in bacteria. This family includes vitamin K epoxide reductase (VKOR) present only in bacteria. VKOR (also named VKORC1) is an integral membrane protein that catalyzes the reduction of vitamin K 2,3-epoxide and vitamin K to vitamin K hydroquinone, an essential co-factor subsequently used in the gamma-carboxylation of glutamic acid residues in blood coagulation enzymes. All homologs of VKOR contain an active site CXXC motif, which is switched between reduced and disulfide-bonded states during the reaction cycle. In some bacterial homologs, the VKOR domain is fused with domains of the thioredoxin family of oxidoreductases which may function as redox partners in initiating the reduction cascade. This family also has a cysteine peptidase domain present at the N-terminus of the VKOR domain.	1.89118e-30
NZ_CP042170.1\|WP_078006427.1\|1461251_1462544_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|366149	pfam00529, HlyD, HlyD membrane-fusion protein of T1SS. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD and HlyB are inner-membrane proteins and specific components of the transport apparatus of alpha-haemolysin. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.	5.83364e-16
NZ_CP042170.1\|WP_078006436.1\|1447051_1448680_+\|NAD(P)-binding-protein	gnl\|CDD\|379192	pfam13450, NAD_binding_8, NAD(P)-binding Rossmann-like domain.	8.30759e-11
NZ_CP042170.1\|WP_078006969.1\|1443556_1443919_+\|adenosylmethionine-decarboxylase	gnl\|CDD\|376892	pfam02675, AdoMet_dc, S-adenosylmethionine decarboxylase. This family contains several S-adenosylmethionine decarboxylase proteins from bacterial and archaebacterial species. S-adenosylmethionine decarboxylase (AdoMetDC), a key enzyme in the biosynthesis of spermidine and spermine, is first synthesized as a proenzyme, which is cleaved post translationally to form alpha and beta subunits. The alpha subunit contains a covalently bound pyruvoyl group derived from serine that is essential for activity.	7.33466e-18
NZ_CP042170.1\|WP_065451542.1\|1459056_1461249_+\|peptidase-domain-containing-ABC-transporter	gnl\|CDD\|225183	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms].	0
NZ_CP042170.1\|WP_078006434.1\|1449974_1450736_-\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238870	cd01832, SGNH_hydrolase_like_1, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.	3.38271e-39
NZ_CP042170.1\|WP_065451550.1\|1451674_1452853_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173840	cd01151, GCD, Glutaryl-CoA dehydrogenase. Glutaryl-CoA dehydrogenase (GCD). GCD is an acyl-CoA dehydrogenase, which catalyzes the oxidative decarboxylation of glutaryl-CoA to crotonyl-CoA and carbon dioxide in the catabolism of lysine, hydroxylysine, and tryptophan. It uses electron transfer flavoprotein (ETF) as an electron acceptor. GCD is a homotetramer. GCD deficiency leads to a severe neurological disorder in humans.	0

>NZ_CP042170.1|WP_078006432.1|1453021_1454779_+|AraC-family-transcriptional-regulator
MRLIISFLLFFVLNTAVSQQKNALTEQEYLLLQDKIRLTANANVDSAIVFANQMVKSNNNKHLAFANGALSYLVQLKGNSAQSKQKYKLALSYLNKMPETRDKKQLRSILYNYQGLSEWKRGNFSGAIESYQQGIKLSIEIGDIIQIVKFKNNIASINVAVGNYLLAIKDLRQLNDFVDKNERVYTKEQYLNNKSNINLILAGSYEVFYMKDVKKKTLLDSAEYFYKKTISYSQNFPDNKIVAKLSLGNIYSWQKNYANAEKTYYDIVFLAHQNNMPEILCTANYNLGDLYFTTKKYDKALVFFKKSDSIAASTKTNQVDYLKSNYYQAKIYNILKEPELAYKHSKIYLDNYEKSESKLNEEILEVNYKLGVGDLTNEMVSIQEKYKYDVFINKALKVFYVILFVSIVFLLIKNIRDKNKAHKKMNDLIEEFKANLEKKANYPEQEEEITEEVFEQEEVLLKKENANLSIDEAKENKIVEKLLALENKLEYLNADFTLPYVAKKIKTNTTYLSYVVNKRFGKSFGEYSNELKINYVINEMITNHMYRKYSTQAIAESVGFKNAVSFAKSFRKRTGVSPAQFANNI
>NZ_CP042170.1|WP_065451550.1|1451674_1452853_-|acyl-CoA-dehydrogenase
MKPDLFQAPDYYNLDDLLTDEHKLVRESARAWVKREVSPIIEEYAQKAEFPKQIIKGLGEIGGFGPYIPVEYGGAGLDQISYGLIMQEIERGDSGVRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKLATGEFMGCFGLTEPDHGSDPGSMITNFKDKGDHYLLNGAKMWISNAPFADIAVVWAKDESGRIHGLIVERGMEGFTTPETHNKWSLRASSTGELIFDNVKVPKENLLPNKSGLGAPLGCLDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIGGTQLQQKKLAEMITEITKAQLLTWRLGVLRNEGKATTAQISMAKRNNVDMAIHIAREARQMLGGMGITGEYSIMRHMMNLESVITYEGTHDIHLLITGMDVTGIPAFK
>NZ_CP042170.1|WP_078006433.1|1450803_1451586_-|DUF3050-domain-containing-protein
MNIETIHNSIQPQKDQLLQHSLYNKIQSIDDLHSFLESHVFAVWDFMSLLKALQAKLTCTTTPWFATKNPETRYLINEIVLAEETDLSIDGRRQSHYEMYIEAMQDCGADTNGINTFLSEVNSLHNIFVAIKQSTLHPDTKAFLDFTFRVIEEGKPHEIAAAFTFGREDLIPSMFTAILKNFQQNLPETDLSKLLYYFERHIELDADEHGPMAMQMITDLCEDDAQKWKEVEEISILALEKRIGLWNAIEEEIMMKTEMV
>NZ_CP042170.1|WP_078006434.1|1449974_1450736_-|SGNH/GDSL-hydrolase-family-protein
MKSHFKQIVIVILSIFLLSCSSEDSASKTAVTPPLPVIPPKTEVPTTPISGSVKYLALGDSYTIGQSVCETCRFPEQLKSSLKTIYPQTDFSLKVIARTGWTTSNLISAINSENPDATYDLVTLLIGVNNQYQHIDFSVYQKEFPQLLNKAIQLAKGDKKNVIVVSIPDYAYTPFASGYSSAKRTEISNEIDQYNTFAENTCTSSGVTFISITDITRQSTSNLVASDGLHPSETAYKLFVDRIVPKAKMILQD
>NZ_CP042170.1|WP_078006435.1|1448657_1449695_+|hypothetical-protein
MKQPWIHKAKTDLAFIIGPSFFVLAIIFLFQDYITEIENKYSFYTWLFLIVFIDVAHVYATLFKTYFVADEFKKNKKRLLLLPTICFAIGIILFSFGSLVFWSFLAYVAVFHFIRQQYGFMRLYARNEEKTRVSVIIDNLAIYASTGYPMLYWFFSSERKFNWFVANEFFRFENAFLLQILFWIYISILFVYVSYTIHKSIKNRFFNIPKNAIILGTALSWYFGIVYFNDDLIFTLLNIVSHGIPYMALVYFREIENKPNQSLGVFSYLKSYNAIFIYILILIGIAFTEEFLWEVLVWKENLSVAAIDLSSWQFLIVPLLSVPQFTHYLLDGFIWKSNKSPAKSS
>NZ_CP042170.1|WP_078006436.1|1447051_1448680_+|NAD(P)-binding-protein
MKNGENYSKSRRSFVKGIGASLLLIPFLQFCSDKIIQLLLRLSGTNHLLGHRLWVKDFPKPTTQIHIPYLIVGGGISGLSAARQFHKKGISDFLMLELESHLGGNSSNGENKYSKFPLGAHYLPLPNFKDKELLQFLKEEKIILSYDAKGLPVFDELQLSFAPDERLFYKNNWQEGVVPKEGNSKDQDLEFQRFFKLMDAFREGKGKDGKYLFDIPLRLSSEDIQTRSLDKITMKEWFETNNFAAKPLFDYIDYCCKDDFGLGIHYVSAWAGIHYFAGRKQDAASDKKESVLTWPEGNARLASHLKKYTDKKTLKNHLVYEVKVENNKVVAKAFDDIKKVSVEIIADKVIMATPQFVNQYLIKDRKEFTKEFHYTPWLLASLTVTDLADNFSFPLSWDNVIYDAKGLGYVYDQHQSLNQVQTKKVITYYYSFSSADLRTSRKELYKKNKEYWKQFVFDDLKIAHPDIEDCTEEMEVFLLGHGMVSPAPGFIFGKAKEEASKSIDNRIYFAHTDLSGISIFEEAFHHGINVVNQILDETTLDS
>NZ_CP042170.1|WP_078006437.1|1445556_1447077_+|polyamine-aminopropyltransferase
MGKKFIKFEFLLLFAVFVIATCGLIYELVAGTLASYLLGDSVKQFSFIIGVYLFSMGIGSFFSKFFHKNLLNTFVEIEILVGLIGGLSSVVLFLLFESVEYFQFILYLLVFITGFLVGLEIPLLMNILKDKVEFRDLVSNVFTFDYIGALLASILFPLILVPKLGIMGTSLFFGMINVSIAIVLCFLLKRELKNSYFLKAKAIFSFAILLGVFVFSDKILAYSEGKLYGENIIYTNSTPYQRIVLTHNKSDYRLYLNNNLQFSSADEYRYHEALVHPVMSIAKNVKHVLVLGGGDGLAVREILKYKDVEKVTLVDLDQGMTKLFQTNKVLTDFNKGSLNNPKVTVINTDAYIWAKTCTEKFDVAIIDFPDPSNYSLGKLYSLNFYQTLKTILQPDAAVVIQTTSPYFAPKSFWCINKTVMQVFPQVDAYHAYVPSFGEWGYTIAINGFGTTFNNVNRKADGLKFYNYQFDRFNYFTNDMISNEIEINRLDNQILVRYFDEEWGKLQ
>NZ_CP042170.1|WP_065451555.1|1445348_1445564_+|DUF350-domain-containing-protein
MDLIHYQPIVNSIIYSVLGFVILIAAYFIIEKMTPENTWKEVVEKNNIAVAIVLAAFIIGISMIISAAIHG
>NZ_CP042170.1|WP_078006438.1|1443922_1445152_+|DUF4178-domain-containing-protein
MKVPCYNCDTVTELEVGFKVVNFVCPNCHSLYWADSEGQLRSRSKFRPEVNYFDFKIGDKGLLKGTEYMVTGAITKKVNGGYHWREYILKNDAGDFVYLSESNGHWIFLTEMEEKFDVRMHPKSITYDSSSFHLYEYSDTDIDNAAGFFDFELPVKRVHLTEYIQPPLMISIEKMNGVETAFLGEYISKKELKKAFPQADLPYQRGVSIVQPYYFDVNNTAIIFCIFLLMIITANWYIYKDQAEQIVFDKAIAFTDFNDKEVTSESFVLKGGSAPITVHVSTDVDNSWANVDVALVNETTNDEIHANKDIEYYHGYEDGESWTEGNWSEKFNICGVKEGKYHLLIKPLKAPEDNKNTAMKVKVVWNQPSSRNVWIIAIFMIVVYVVIRYFKINFEKMRWEDSSYSPYSE
>NZ_CP042170.1|WP_078006969.1|1443556_1443919_+|adenosylmethionine-decarboxylase
MDLPPYSPGLHKLVTLHVTETQKLTDSQGFVAVTNSILEQYNLEKVGVIVHDFDNDSFTISFCLKESHICIHTWPEYNQLTLDVYLCNYQQDNSQKVRDVMANYITYFEGTIIKDFEINR
>NZ_CP042170.1|WP_123921771.1|1455228_1455354_-|rSAM-modified-peptide
MTNQGLKLTDFQTEKIAKNQQKTISGGDDIDPSKGDGKGAM
>NZ_CP042170.1|WP_078006430.1|1455615_1457178_+|hypothetical-protein
MLKLVQKFLQINRYSEIKNEFKDLFLSHPNYPSLFAITDSLDLLSVENAAVRVSKEQIVDLPSNFLAYFKEEIILVEKAKNFVRINTLKKGSLKMSYENFLLDWNGVIVAIEPNNVVARENLKVEFSWLKFTLPLLLVVGLSFFYNNYTLFSIIFLATSVLGMIVSIFIVQEKLGFKNSIISKFCNLSSNSSCNSVINSKEGNNKWIGFSDLPLIFFGASLIAILIQPLSSAIFIGFLSLLAIPVIVSSIWIQKFEIQKWCVMCLAVSALIFVQSAIWFASDLFTLSFSFQEIFPFVFSVVLLIPIWSVLKTMVKNVLENENSLKEMKKFKRNYSLLNFLSKKVPYPNGLEDLRGLNFGNRNAAVKLSIIISPSCGHCHKTFQEAFDLVLRFPDKIFLNVLFNINPENAENPYKPVVERLLAINRATPGKTVEAISDWHIKKMGLKKWLKKWHVDTVSIMINQEIQKQYEWCSKNNFNYTPVKIVNDKVFPSEYELSELKYFLNDFVEETTTSEVFEKIA
>NZ_CP042170.1|WP_078006429.1|1457273_1457453_+|hypothetical-protein
MLKNILNLEGTKELSANEQKMIDGGNAPVCNEGSFAKRCNEFGTVPYYWACVPNGTKSC
>NZ_CP042170.1|WP_065451546.1|1457525_1457735_+|hypothetical-protein
MIKNILNLEGAQLLSTDEQKVIQGGQPIKSSTCHCFCSTGSASCFTYCPDGSIPGLSEGSTGNCKFPFE
>NZ_CP042170.1|WP_065451545.1|1457771_1457984_+|hypothetical-protein
MLENILKIKGAEVLSASEQKSITGGSVPPDGECGEFVVFYATQAQCLAYPRNLRPAYIGNNQCSILMAPC
>NZ_CP042170.1|WP_065451544.1|1458042_1458234_+|hypothetical-protein
MLKKILNLENAQRITKVEQKNISGGIPECWIYAIEAGCVLIPAGGTCPVNTSSGICETSRLCC
>NZ_CP042170.1|WP_065451543.1|1458592_1458781_+|hypothetical-protein
MKKLKNLIGVEVLSAVEKKNINGGGPGIEACYCPDGTFAGIIHPGEGEVCSSVIEESCLLDS
>NZ_CP042170.1|WP_065451542.1|1459056_1461249_+|peptidase-domain-containing-ABC-transporter
MKKFTNYKQADYKDCGPTCLKIVAKHYGKTINIQELRDISETTREGSNLLFLSDAAEKIGFRTLGVKLNLERLHEAPLPCILHWNKNHYVVLYKIKRGTYYISDPAFGLIEYNKQDFIKFWIGNNADEFTQEGVALLMEAAPKFFQSEFDKEENKGLGFALLSQYVLRYKSFLIQLSIGLLASSLLQLIFPFLTQSIVDVGIQNQNIHFIYLILFAQLFLFAGKTGLELIRSWILLHLSTRINISLISDFFIKLMNLPISFFDVRMTGDIMQRINDHRRIEKILTTSSLNVLFSVINMFVLGGVLAYFNVQIFFVFFAGSILYFGWITLFLKRREVLDYKRFAEVSNEQNKVMELINGMQEIKLHNAEKQKRWGWEYIQARLFRVSIKGLVLEQTQTIGSSVINELKNIFIIFLSAKLVIDGSITLGMMLAISSIVGSLNGPITQLIEFVRELQDAKISLARLSEIHEKEDETQQEVHQTSDVPFDSDIEIKNLSYRYLGSDIPVLDDLSLKIPANKVTAIVGVSGSGKTTLMKLLLKFYEPEKGEITIGNTQFKNISQKAWRSNIGAVMQEGFIFSDTIANNIAFGVDKVDKERLVYASDVANIKEYISGLPLGYNTKIGAEGTGMSTGQKQRMQIARAVYKNPEILFFDEATSALDANNEKEIMRKLDIFFKDKTVVVIAHRLSTVMNADQIVVLDKGKIIEIGNHSALVEQKGNYFELVKNQLQLGN
>NZ_CP042170.1|WP_078006427.1|1461251_1462544_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MAEDTTFELRSEEVQDILTRVPHWMIRWGTVLIFVIIFMLFFVSWFIKYPDVVNTEIVITTNIPPEKIVSKSSGRIEAILVKNKSIVSKNSTLAIIENTANYKDVFLLKKIVDEYNINNPQKAFPFALLKNAQLGEIESAFAVFQKDYQAEALNKDLQPFQVENRAQVSEKVQIKERLEILQQQKIINESELQLQKNEIARFETLFNKGIISAQEMEAKKLGYLQAQKSYKSLLTSISQLKSSLIDNSKLSQNSQISGTKEEVTLGRNMAQSFYQLKKVIKDWEFAYALNSSVSGVVTFLQVWTESQTINVGDNVFSIIPDTKNGFVGKVKAPALNSGKIKVGQTVNIRLANFPDREFGVLKGKIQNISLVPDKDGNLLLDVALPNGLQTSYKKQIVFQQEMKGSAEIVTEDLRLIERILYQFKSIFEQV
>NZ_CP042170.1|WP_078006426.1|1462540_1463254_-|methyltransferase
MSKFTFKQFSIEQDKTAMKVGTDGVLLGSWAPINHNPFSVLDIGAGTGIIAMMLAQRTHAEQIDALEIDEDAYEQAVDNFENSPWGDRLFCFHAGLDEFIEEPEDEYDLIVSNPPFYAEDYKTENEQRDLARFQDAMPFEELVEAADLLLSENGIFAIIIPFKEEAKFIALAKESELYPAKITRVKGTPTSTIKRSLLAFSRNETAVLEIDELTIEIDRHVYTPEYIELTKEFYLKF

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Crispr_ID: NZ_CP042170_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042170_5

1486259-1486375

Orphan

Consensus_repeat	Method
TTTTAATCTGTGGCAAAAAAATAACCACAA	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP042170_5

>merge|NZ_CP042170|5|1486259-1486375|CRISPRCasFinder
TTTTAATCTGTGGCAAAAAAATAACCACAAAGAATTAGTGAGAATTTGTGCAATTCGTGGCAAACCTTTTATTAATCTGCGAAATCATTTTAATCTGTGGCAAAAAAACAACCACAA

>NZ_CP042170|5|5|1486259-1486375|CRISPRCasFinder
TTTTAATCTGTGGCAAAAAAATAACCACAA	AGAATTAGTGAGAATTTGTGCAATTCGTGGCAAACCTTTTATTAATCTGCGAAATCA
TTTTAATCTGTGGCAAAAAAACAACCACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042170.1\|WP_055097397.1\|1493727_1493967_-\|NifU-family-protein	unknown	unknown	gnl\|CDD\|376458
NZ_CP042170.1\|WP_078006967.1\|1485442_1485841_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_065451524.1\|1488979_1489363_+\|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl\|CDD\|376605
NZ_CP042170.1\|WP_078006968.1\|1484740_1485448_+\|PorT-family-protein	unknown	unknown	gnl\|CDD\|372635
NZ_CP042170.1\|WP_078006415.1\|1479485_1481594_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224422
NZ_CP042170.1\|WP_078006409.1\|1493029_1493512_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_065451526.1\|1484164_1484518_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_026982672.1\|1492651_1492969_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|178203
NZ_CP042170.1\|WP_065451530.1\|1476918_1477848_+\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|379226
NZ_CP042170.1\|WP_078006412.1\|1490667_1491222_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP042170.1\|WP_078006414.1\|1481792_1484000_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273807
NZ_CP042170.1\|WP_078006420.1\|1469433_1470030_-\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
NZ_CP042170.1\|WP_065451531.1\|1472199_1476741_+\|DNA-polymerase-III-subunit-alpha	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235554
NZ_CP042170.1\|WP_065451518.1\|1494081_1495212_-\|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl\|CDD\|378455
NZ_CP042170.1\|WP_078006419.1\|1470140_1471535_-\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
NZ_CP042170.1\|WP_078006411.1\|1491292_1491694_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379476
NZ_CP042170.1\|WP_078006417.1\|1478167_1479160_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP042170.1\|WP_065451523.1\|1489534_1490524_+\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237845
NZ_CP042170.1\|WP_078006410.1\|1491844_1492339_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|214864
NZ_CP042170.1\|WP_078006413.1\|1486440_1488912_+\|bifunctional-UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine-ligase/alanine-racemase	unknown	unknown	gnl\|CDD\|237026

Protein	Function_ID	Function_description	E-value
NZ_CP042170.1\|WP_055097397.1\|1493727_1493967_-\|NifU-family-protein	gnl\|CDD\|376458	pfam01106, NifU, NifU-like domain. This is an alignment of the carboxy-terminal domain. This is the only common region between the NifU protein from nitrogen-fixing bacteria and rhodobacterial species. The biochemical function of NifU is unknown.	3.36291e-25
NZ_CP042170.1\|WP_065451524.1\|1488979_1489363_+\|large-conductance-mechanosensitive-channel-protein-MscL	gnl\|CDD\|376605	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL.	1.65261e-53
NZ_CP042170.1\|WP_078006968.1\|1484740_1485448_+\|PorT-family-protein	gnl\|CDD\|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	8.32311e-09
NZ_CP042170.1\|WP_078006415.1\|1479485_1481594_-\|S9-family-peptidase	gnl\|CDD\|224422	COG1505, COG1505, Serine proteases of the peptidase family S9A [Amino acid transport and metabolism].	0
NZ_CP042170.1\|WP_065451530.1\|1476918_1477848_+\|outer-membrane-beta-barrel-protein	gnl\|CDD\|379226	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	0.000367582
NZ_CP042170.1\|WP_026982672.1\|1492651_1492969_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|178203	PLN02593, PLN02593, adrenodoxin-like ferredoxin protein.	1.01465e-14
NZ_CP042170.1\|WP_078006412.1\|1490667_1491222_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	3.90665e-16
NZ_CP042170.1\|WP_078006414.1\|1481792_1484000_-\|TonB-dependent-receptor	gnl\|CDD\|273807	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein. This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	1.20044e-45
NZ_CP042170.1\|WP_078006420.1\|1469433_1470030_-\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	4.23191e-92
NZ_CP042170.1\|WP_065451531.1\|1472199_1476741_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NZ_CP042170.1\|WP_065451518.1\|1494081_1495212_-\|Mrp/NBP35-family-ATP-binding-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	1.09179e-129
NZ_CP042170.1\|WP_078006419.1\|1470140_1471535_-\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NZ_CP042170.1\|WP_078006411.1\|1491292_1491694_+\|hypothetical-protein	gnl\|CDD\|379476	pfam14112, DUF4284, Immunity protein 22. A predicted immunity protein with an alpha+beta fold and conserved tryptophan,tyrosine and an acidic residues. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbor of the toxin gene, which usually contains toxin domains of the ColD/E5, Tox-REase-4, Ntox49 or Ntox14 families. The domain is also found in heterogeneous polyimmunity loci.	3.95594e-16
NZ_CP042170.1\|WP_078006417.1\|1478167_1479160_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	9.57696e-69
NZ_CP042170.1\|WP_078006413.1\|1486440_1488912_+\|bifunctional-UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine-ligase/alanine-racemase	gnl\|CDD\|237026	PRK11930, PRK11930, putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Provisional.	0
NZ_CP042170.1\|WP_078006410.1\|1491844_1492339_+\|SMI1/KNR4-family-protein	gnl\|CDD\|214864	smart00860, SMI1_KNR4, SMI1 / KNR4 family. Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation.	0.000249841
NZ_CP042170.1\|WP_065451523.1\|1489534_1490524_+\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|237845	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional.	1.42571e-174

>NZ_CP042170.1|WP_078006967.1|1485442_1485841_-|hypothetical-protein
MVHETSQRKIPLVLQCFLYILLVKRSIVIARYPELHFFFLGALFSTILALVFAMLKIKASLHMMAISGFTIFAIGLNMHLQMHNPYWAAFLILMTGVVASSRLEMEAHSPNELLIGTFIGIVPQLLFLYLWL
>NZ_CP042170.1|WP_078006968.1|1484740_1485448_+|PorT-family-protein
MRLLFSCLFLVSFFNSFAQDVKPEIKPIVKIDSLYREDQFYFSVTYNLLVQAPSGLKQDKFSAGLSAGFLRDMPINKTRTLAIAAGLGLSYQNFYQNLTISKSQDGAQIYGVNGYGEFVSNRYKQYSVDLPIEFRWRNSTYESSKFWRVYSGVKLSYVFSDKSILKDGETTYKISNNKDVNQFQYGVYISAGYNTWNVYCYYGLNSLFDKSVKTVSTGESISMKAMNIGLIFYIL
>NZ_CP042170.1|WP_065451526.1|1484164_1484518_-|hypothetical-protein
MKRKQLILSVSLALTVLFSILFQSIHSYEHIVKQLSEKQCHHNYNDPNGEITHQHNDYDVCFVCHFVFGSYILPEQFAFEFHTFNYEIPYFFTHSEKIFSISENPYQLRGPPSAIVS
>NZ_CP042170.1|WP_078006414.1|1481792_1484000_-|TonB-dependent-receptor
MKKIILALILGFSGILSAQNSVSGTVTNLENQPLANVSVYAPELHKGTTTDQNGKYEFKNLPNGSFRLTFTFVGFTTQSKSISKLLKENTIDITLTESIFEMDEVVVSTPFNKLQSQNVMKVEHESIKTLQQKGTSTLIEGLATIPGVSQISTGTSIGKPVIRGLSGNRVLVYSQGVRIENQQFGDEHGLGLNDAGIESVEVIKGPASLLYGSDALGGVLYFNPEKFADANTFKANFSQKYFTNTQGSNSSIGLKTSTDNWKFLARGSFNTHSDYKIADGDRVTNTRYNETDFKTGIGYSNSSFSSVLRYNYNKLDLGMPDNGIGEQSTSKNTEFPRQGIFNHLLSLNNVIFFENSKLDVDLGYIANDRSEFEDSNEASLHMKLNTFNYNAKYHFPKLGKIETILGVQGMHQTNKNSGEEYLIPDATTNDFGVFGTANYEWDNSVLQAGLRFDNRNITSIAHGTEGEEGYFLPLDRSFDSFNASLGYKTKLAEPLTLRLNVATGFRAPNLAELTSNGVHEGTNRYEIGNAALKTEQNVQTDLNLEYKNTHFEFFINGFYNHVNNYIFTSPTGEVRDDNDVFAYVQDNAKLYGGEVGLHFHPHPLDWLHFETSFETVTGKKANNDYLPLIPANNWNNTLRTEFKINKWFEEGYASLNVSSTFAQKNVSGFETASDGYTLVNLGFGGTVKLGKHAFDVNLNGNNLFDQKYIAHLSRLKTDGIPNIGRNIVLGVNFNL
>NZ_CP042170.1|WP_078006415.1|1479485_1481594_-|S9-family-peptidase
MKKTFLIMAITTAGISFGQNKIQYPESKKGETVDVYFDTKVNDPYRWLEDDKSAETGAWVKAENEVTYGYLDKIPFREELKKRMEKLWNYEKISAPFVEGKFTYYSKNNGLQNQSVIYRKGKDGKEEVFLDPNTFSKDGTTSLGGLNFSKDGNKAAYAISEGGSDWRKVIIIDALSKKAIEDTLVDVKFSGVAWHGNEGFYYSSYDKPKGSELSAKTDQHKLYYHKLGTAQKEDKVIFGADQKRRYVGGYVTEDDKYLVISAANSTYGNELYIKDLTKADSPIVTIVDNFNSSNQIIENEGTKLFIETDLNAPNTRVVTVDISNPKPENWKDFIKETQNILSPSTGGGFFFANYTKDAVSFVQQYDYSGKLIREIKLPAVGTAGGFGGKKEEKTLYYSFTNYTTPGTIYSLEPKSGKSEVYQKPVVDFKSENYESKQVFYTSKDGTKIPMIITYKKGTKLDGKNPTILYGYGGFNISLTPSFSIANAVWLENGGVYAVANLRGGGEYGKKWHDAGTKLQKQNVFDDFIAAGEYLIAQKYTSSDFLAIRGGSNGGLLVGATMTQRPDLMKVALPAVGVMDMLRYHTFTAGAGWAYDYGTAQDNKEMFEYLKGYSPVQNVKAGVKYPATMVTTGDHDDRVVPAHSFKFAAELQEKQTGPNPVLIRIDVKAGHGAGKSVAATIQENVDIQAFTLYNMGFKALPKK
>NZ_CP042170.1|WP_078006417.1|1478167_1479160_-|Gfo/Idh/MocA-family-oxidoreductase
MKIVKWGIIGCGNVTEVKSGPAFQKAPNSALVAVMRRDAALAEDYAKRHNVPKWYSNAVDLINDPEVDAVYIATPPSSHKEYTILCAKAGKPVYVEKPMALNFEECNEMISVCKEHNVSLFVAYYRRSLPRFLKIKELIDQNKIGIVRHVNCVLYHPFEERYDDEINLPWTVLPHISGGGIFVDLACHTLDFLDFVLGPIKSVRGHASSQLKAYPAEDSVSMSFLFENGIHGTGLWNFASFERYDNTDIVGDKGKISFSTFGNDPIHIQYTNGEKESITIENPLHIQQPLVETVVAEILGNEGINPSRGTSASRTTWVIDEVLKEFRNSK
>NZ_CP042170.1|WP_065451530.1|1476918_1477848_+|outer-membrane-beta-barrel-protein
MKKNLFLLGLLVCSMATMAQTEKADKPESWYFKLGGSYFIQTAATEFPTVGGNLPLDRTFVGGKLVSEESVTGSFGEGFRTGITAGYRFNARLGVELGVNYYTSKDKTMAQTRSDVPITPAGVYAFKSVGQITAFDLAPALVLFLGEHKGFEPYTKVGVLVPIHGDLEITSDAYAPIAFNPTTGAPVAFGNVHSVDKVKPNPTVGFVAALGTSYKLGKNISVFGELEYRNFTVHGKTKETTEFNVNGNDALASRSTSQIHTNYRDRLDVNSNNALTNPNGVDKTKPMDELSSYVGISGLGLTLGLKYSL
>NZ_CP042170.1|WP_065451531.1|1472199_1476741_+|DNA-polymerase-III-subunit-alpha
MYLIFDTETTGLPKRWDAPITDSDNWPRCIQIAWQLHDEMGTLVEHQDYLVKPDGFNIPYDAERIHGISTELAEADGITLAEVLEKFNIALSKTKFIVGQNLGFDVNIMGAEFHRMGVDSSMSSMPVLDTCTEVTASLLKLPGGRGGRFKLPTLTELHEYLFNKPFAEAHNATADVEATTRCFLELIRREVFTKEELDVDKDYFKEFQNRNPQEFPLIGLKHINLKAASDKIREQLKALESVGKETTVSHSDREDFKEAKYAHLHNHTQFSVLQSTIGIGNIVAATAKNGMPAVAMTDTGNMMGAFHFVSAVMNHNKAASAKNKALVEAGEEPTETEIKPIVGCEFNVCDNHLDKSKKDNGNQVVLLAKNKKGYHNLAKMSSIAFTDGFYYVPRIDRKIVEQYKEDIMVLSGNLYGEIQSKILNVGENQAEEALIWWKEQFGDDFYLEVMRHNQEDENRVNKTLIEFSQKHNVKLIATNNTYYLNKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYYKSSEEMKKLFADLPEAIINIQEIVDKVEIYSLYRDVLLPKFDIPQEFVVPEDDADGGVRGENKYLRHLTMEGAKRRYGEITESIQERLDFELLTISNSGYPGYFLIVQDFIAEARNMDVSVGPGRGSAAGSAVAYCLGITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMEYVINKYGKNQVAQIITYGKMATKSAIRDTARVLDLPLFEADRIAKLIPAMMPSKWNLARFISENEDEVKKALRSDEFDNVKELIAIANEDDLAGETIQQAKILEGSMRNTGIHACGVIITPSDITNFVPVTTAKDSDLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTVKLVKYRNGIDLDPDTFPIDDVETYALFQRGETVGIFQYESPGMQKYMKDLKPTVFGDLIAMNALYRPGPLEYIPSFVRRKNGEEEIKYDLDACEEYLGETYGITVYQEQVMLLSQSLADFTKGEADVLRKAMGKKQKDVLDKMKPKFVEQAAKKGHDAKVLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNNMNDIKQVSFFMEECKRMGLQVLGPDVNESFYKFTVNDEYAVRFGMGAIKGVGSGAVATIVESRKDGKYKSIFDLAKRIDLRAANKKAIENLALAGGFDSFEGTTRAQYFHDDGDGITFYEKAIRYGSKFQENENSSQVSLFGETSEVQIDEPVVPPCEDWSTMEKLAKEKEVVGIYISGHPLDDFRFEMKYFCNSRLESLKSMNEYVGKNLNFAGIINNVQHRVAKNGKGWAVFNLEGYDESYEFKIFGEEYLKFRHFLIQNNFAFIKILIKDGWVNHDTGKKSDPRMQFVEIRQLQDILEAFAKKLILLLNIKDLQAEFIHNLSQLFSANKGDNSVTFEIMELEKIKRLVEVETPTDFEEADDAVFVDENAEDGETQLEETKIQEVNEVEEIKVVTKLAMPSRRLKVKISTELLIELEKMQVNFKLN
>NZ_CP042170.1|WP_078006419.1|1470140_1471535_-|3-isopropylmalate-dehydratase-large-subunit
MSKTLFDKVWDSHVVRKIEDGPDVFFIDRHFIHEVTSPVAFLGLKARGVKVLYPERTFATADHNTPTINQHLPVEDALSANQLKALEDNAAEYGISHWGLGHIKNGIVHVVGPENGITLPGATIVCGDSHTSTHGAFGAIAFGIGTSEVEMVLSTQCIMQPKPKKMRINVNGQLSKGVGPKDVALYIIAQLTTSGGTGYFVEYAGDVFENMTMEGRMTVCNLSIEMGARGGMIAPDQKTFDFLEGRLYAPKGEAWTKAVEYWKTLKTDADAIFDAELNINASDIEPMITYGTNPGMGIGISKHIPNANQVEGGEETYKKSLAYMGFEEDDVMIGKPIDYVFLGSCTNGRIEDFRAFTEIVKGRKKADNVTAWLVPGSHVVEAQIKEEGLLDILTEAGFVLRQPGCSACLAMNDDKVPAGKYAVSTSNRNFEGRQGPGSRTLLASPIMAAAAAVTGKLTDPRELF
>NZ_CP042170.1|WP_078006420.1|1469433_1470030_-|3-isopropylmalate-dehydratase-small-subunit
MAYDKFNILTSSAVPLPIENVDTDQIIPARFLKATKREGFGDNLFRDWRYNGDDTPKADFVLNDTTYSGKILVGGKNFGSGSSREHAAWAVYDYGFRAVVSSFFADIFKGNCLNIGVLPVQVSPEFADTIFKAIEADPKTELEINLPNQTITLLATGQSESFAINGYKKNNMINGFDDIDYLQNIKEDIVAFADKLPY
>NZ_CP042170.1|WP_078006413.1|1486440_1488912_+|bifunctional-UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine-ligase/alanine-racemase
MSINLKSLIPVLDAEWIGSETDIFVNHISIDSRSLQNGSETLFIALSGVNNDAHLYIEELIAQGVQNFVVQYIPENCVGKANFLVVKNALKALQEFAAYYRNLFDFPVIGLTGSNGKTIVKEWLNFLLSPDFNIIRSPKSYNSQVGVPLSIMAINEKHNLGIFEAGISTVNEMVNLEKIIKPTIGVLTNIGSAHDEGFLNLVQKIDEKLILFKDCPVIIYQKNEIVDSCLSQFVAEYMMHPRTLFSWSFTDASADVFILNKENKSDSTHIKYQYKEAIFNLEIPFSDTASIENAISCLAVLLYLNYDFETIQNRFKRLYPVHMRLEVKNGINNCSIIDDSYSSDFESLTIALDFLESQKKKNASKTVILSDIVQSGFSNEELYSKVGQLIADNKINRVIGIGTTISAFKSKFSNVVTFQNTAEFIAQIENLNFENETILIKGARSFQFEEIVSLLEEKTHETVLEINLNSISYNLNYFKSKLANNVKLMVMVKAFGYGNGGLEIAKLLEHHKVDYLGVAFADEGILLKNGGIKLPIMVLNPESTSFPSIIQYHLEPEIYSIKGLKAFLKIAREKNLKDFPIHIKLDTGMHRLGFEENTLEELIQTLKGNSTVKIKSVLSHLATSDELQHYDFVISQINLFEKLSSKLISELNINPIRHILNTSGISNFPDAQYNMVRLGIGLYGVSNDPAEQKYLENVSTLKSIISQVRTIPAGDSVGYGRRFMASKETKIATIPIGYADGISRLWGNQVGYVVIKNQKAFIVGSVCMDMLMVDVSHIDCKEGDSVIIFGESPTVIEMAAALKTIPYEIMTSISQRVKRVFFR
>NZ_CP042170.1|WP_065451524.1|1488979_1489363_+|large-conductance-mechanosensitive-channel-protein-MscL
MGMFSEFKEFAMKGNVVDLAVGVIIGAAFGKIVSSLIENVITPLILKPALDAAHLSTIEELTAFGGVKYGLFLSAVINFLIVAFVLFLIIKGINHAKKKEVPPPAAPAGPTQEELLIQIRDLLKNKQ
>NZ_CP042170.1|WP_065451523.1|1489534_1490524_+|aspartate-semialdehyde-dehydrogenase
MRIAVVGATGMVGEIMLKVLAERNFPVTELIPVASEKSVGKEIEYKGQKYKVVGLQTAVDLKADIALFSAGGDTSLEWAPKFAAAGTTVIDNSSAWRMDPTKKLIVPEINADTLTSADKIIANPNCSTIQMVLTLAPLHRKYNIKRIIVSTYQSITGTGVKAVRQLENEYAGVQGEMAYKYPIHRNAIPHCDSFEENGYTKEEMKLVRETQKILGDNTIRVTATAVRVPVVGGHSEAVNVEFTNDFDVNEVREILHHTDGVVVQDNLDTFTYPMPLYAEGKNDVFVGRIRRDESQPNTLNMWIVADNLRKGAATNTIQIAEYLIQAGLV
>NZ_CP042170.1|WP_078006412.1|1490667_1491222_+|SMI1/KNR4-family-protein
MNELIEKLDRQLAGLRPEYYQELKPSLSDLEIQNLEEQYKIRLPENLKTLYKWKNGQNQNCYESFVNNSMFVSLEDALDTAAELTSMIGSDFEIENWWNENWIPVFHNGGGDYICLDCEGTFTKNPGQLIEFWHADEDRNVIAPSLKFFISQIVKHYEETNPQDFDEYFEIENIDNFPLVFTVE
>NZ_CP042170.1|WP_078006411.1|1491292_1491694_+|hypothetical-protein
MKTETSHFWLGKFKSEEEYFDFVAEDNAYYEDDEVEEKFISEFAKSQGENFLDHDFMESGFENEAISFEEKFLKYSYADQWIAEVKKRLSDLNQNLEDVNTLVFISKDQIEKPVSIMNSKCDLLYIGEIEYDI
>NZ_CP042170.1|WP_078006410.1|1491844_1492339_+|SMI1/KNR4-family-protein
MNFDNYKIIPNCKTNKTDLFLAENEDILACEKTLNIAFDEDYKEYVLNYGSGILGGTYVRIYLPETIILTMDEWKSRITEYWFWDDGKDVLSKEEVLNSVRIGDTYDGDEIIFFKNEYFILPRESEMIYKAGNTLEETINWLCSSGILTEAFSEREFEPFEQQS
>NZ_CP042170.1|WP_026982672.1|1492651_1492969_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MDVLIKIKDREGVIHELQAPTDMAMNIMELCKAYELPVEGTCGGMAMCASCQCYVLNDVALPEMGDEEEAMLSEAFYVKSNSRLGCQIPITTELEGLELELAPEY
>NZ_CP042170.1|WP_078006409.1|1493029_1493512_-|hypothetical-protein
MKNYYALFLLLFFVSVNYAQQTTQTLIVDKAWLNEAEEWSDFKYAGQIVFSTNANEPEGTLRIGNYDFLYDFCDGKAKFANKATYSAAQFSNPRKVSVTTDKQGVTNSTYEGTLIFQSDKDYYSVIALVTILEKNGNTLGLKMHLKEGNKKEYAFSLKNS
>NZ_CP042170.1|WP_055097397.1|1493727_1493967_-|NifU-family-protein
MTTEELTNNVLLALDEIRPFLNSDGGDITLISIDDDKHVKVRLEGACISCSVNQMTLKAGVETTIKKYAPQIETVVNIM
>NZ_CP042170.1|WP_065451518.1|1494081_1495212_-|Mrp/NBP35-family-ATP-binding-protein
MKLDRKEILKALETITIAGEGKNMVESGAVANVITFGDEVVVDLLLHTPAMHIKKRAEDDIKKTILELVSPEAKIKVNIKVEAKENPNEIKGKAIPGIKNIIAVASGKGGVGKSTVTANLAVTLAKMGFNVGILDADIYGPSMPIMFDVENEKPISINVDGKSKMKPVESYDIKILSIGFFTAPSQAVIWRGPMAAKALNQMIFDADWGELDFMLIDLPPGTGDIHLSIMQSLPITGAVVVSTPQAVALADAKKGVAMFMQDNINVPVLGIIENMAYFTPEELPDNKYYIFGQEGAKNLAADLDVPFLGEVPIVQSIREAGDYGRPAAMQTASTIETVFEEITRNVVQETVNRNDTLPATEAIKITTMAGCSAVKK

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Crispr_ID: NZ_CP042170_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042170_6

2607912-2608002

Orphan

Consensus_repeat	Method
GTAGGCTCGCCAAATATTGTAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042170_6

>merge|NZ_CP042170|6|2607912-2608002|CRISPRCasFinder
GTAGGCTCGCCAAATATTGTAGGGCTGGACTTCAGTCCAGTCTAAACGATCAAGGAAAAAAAAAGCAGTAGGCTCGACAAATATTGTAGGG

>NZ_CP042170|6|6|2607912-2608002|CRISPRCasFinder
GTAGGCTCGCCAAATATTGTAGGG	CTGGACTTCAGTCCAGTCTAAACGATCAAGGAAAAAAAAAGCA
GTAGGCTCGACAAATATTGTAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042170.1\|WP_078008257.1\|2605566_2606745_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|100032
NZ_CP042170.1\|WP_078008254.1\|2608143_2608767_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078008260.1\|2601331_2601733_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078008248.1\|2616624_2617521_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP042170.1\|WP_078008250.1\|2615443_2616151_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP042170.1\|WP_065447731.1\|2611490_2611934_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078008261.1\|2600801_2601323_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078008247.1\|2617733_2618876_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|238194
NZ_CP042170.1\|WP_078008258.1\|2603914_2605399_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379297
NZ_CP042170.1\|WP_078008249.1\|2616180_2616537_-\|DoxX-family-membrane-protein	unknown	unknown	gnl\|CDD\|226720
NZ_CP042170.1\|WP_078008259.1\|2602487_2603849_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367655
NZ_CP042170.1\|WP_078008256.1\|2606824_2607181_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078008255.1\|2607297_2607903_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP042170.1\|WP_078008252.1\|2612051_2613905_-\|peptidase-M61	unknown	unknown	gnl\|CDD\|380051
NZ_CP042170.1\|WP_055098339.1\|2614004_2614283_-\|DUF2805-domain-containing-protein	unknown	unknown	gnl\|CDD\|378528
NZ_CP042170.1\|WP_078008262.1\|2599884_2600733_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182242
NZ_CP042170.1\|WP_065447965.1\|2601801_2602065_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|337812
NZ_CP042170.1\|WP_078008253.1\|2608946_2611280_+\|glycoside-hydrolase-family-92-protein	unknown	unknown	gnl\|CDD\|377950
NZ_CP042170.1\|WP_065447723.1\|2602081_2602486_+\|curli-assembly-protein-CsgF	unknown	unknown	gnl\|CDD\|371165
NZ_CP042170.1\|WP_078008251.1\|2614403_2615231_-\|sterol-desaturase-family-protein	unknown	unknown	gnl\|CDD\|225546

Protein	Function_ID	Function_description	E-value
NZ_CP042170.1\|WP_078008257.1\|2605566_2606745_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|100032	cd02196, PurM, PurM (Aminoimidazole Ribonucleotide [AIR] synthetase), one of eleven enzymes required for purine biosynthesis, catalyzes the conversion of formylglycinamide ribonucleotide (FGAM) and ATP to AIR, ADP, and Pi, the fifth step in de novo purine biosynthesis. The N-terminal domain of PurM is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, selenophosphate synthetase (SelD), and FGAM synthase and is thought to bind ATP.	2.1344e-73
NZ_CP042170.1\|WP_078008249.1\|2616180_2616537_-\|DoxX-family-membrane-protein	gnl\|CDD\|226720	COG4270, COG4270, Predicted membrane protein [Function unknown].	5.01048e-23
NZ_CP042170.1\|WP_078008248.1\|2616624_2617521_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.26204e-13
NZ_CP042170.1\|WP_078008250.1\|2615443_2616151_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	5.52543e-118
NZ_CP042170.1\|WP_078008247.1\|2617733_2618876_-\|peptidylprolyl-isomerase	gnl\|CDD\|238194	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP, whose isomerization or chaperoning activities may play a role in RNA splicing. .	2.51127e-57
NZ_CP042170.1\|WP_078008258.1\|2603914_2605399_+\|hypothetical-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	4.48798e-09
NZ_CP042170.1\|WP_078008259.1\|2602487_2603849_+\|hypothetical-protein	gnl\|CDD\|367655	pfam03783, CsgG, Curli production assembly/transport component CsgG. CsgG is an outer membrane-located lipoprotein that is highly resistant to protease digestion. During curli assembly, an adhesive surface fibre, CsgG is required to maintain the stability of CsgA and CsgB.	1.08562e-85
NZ_CP042170.1\|WP_078008255.1\|2607297_2607903_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	4.58279e-26
NZ_CP042170.1\|WP_078008252.1\|2612051_2613905_-\|peptidase-M61	gnl\|CDD\|380051	pfam17899, Peptidase_M61_N, Peptidase M61 N-terminal domain. This domain is found at the N-terminus of pfam05299 and has a beta sandwich-like fold with similarity to the baculovirus p35 protein.	1.55103e-37
NZ_CP042170.1\|WP_055098339.1\|2614004_2614283_-\|DUF2805-domain-containing-protein	gnl\|CDD\|378528	pfam10985, DUF2805, Protein of unknown function (DUF2805). This is a bacterial family of proteins with unknown function.	1.79759e-20
NZ_CP042170.1\|WP_078008262.1\|2599884_2600733_+\|hypothetical-protein	gnl\|CDD\|182242	PRK10101, csgB, curlin minor subunit CsgB; Provisional.	0.000124797
NZ_CP042170.1\|WP_065447965.1\|2601801_2602065_+\|hypothetical-protein	gnl\|CDD\|337812	pfam10627, CsgE, Curli assembly protein CsgE. Curli are a class highly aggregated surface fibers that are part of a complex extracellular matrix. They promote biofilm formation in addition to other activities. CsgE is a non-structural protein involved in curli biogenesis. CsgE forms an outer membrane complex with the curli assembly proteins CsgG and CsgF.	1.22379e-08
NZ_CP042170.1\|WP_078008253.1\|2608946_2611280_+\|glycoside-hydrolase-family-92-protein	gnl\|CDD\|377950	pfam07971, Glyco_hydro_92, Glycosyl hydrolase family 92. Members of this family are alpha-1,2-mannosidases, enzymes which remove alpha-1,2-linked mannose residues from Man(9)(GlcNAc)(2) by hydrolysis. They are critical for the maturation of N-linked oligosaccharides and ER-associated degradation.	0
NZ_CP042170.1\|WP_065447723.1\|2602081_2602486_+\|curli-assembly-protein-CsgF	gnl\|CDD\|371165	pfam10614, CsgF, Type VIII secretion system (T8SS), CsgF protein. The extracellular nucleation-precipitation (ENP) pathway or Type VIII secretion system (T8SS) in Gram-negative (diderm) bacteria is responsible for the secretion and assembly of prepilins for fimbiae biogenesis, the prototypical curli. Besides the T2SS that can be involved in the assembly of prototypical Type 4 pilus, the T4SS that can be involved in the biogenesis of the prototypical pilus T, the T3SS involved in the assembly of the injectisome and the T7SS involved in the formation of the prototypical Type 1 pilus, the T8SS differs in that fibre-growth occurs extracellularly. The curli, also called thin aggregative fimbriae (Tafi), are the only fimbriae dependent on the T8SS. Tafi were first identified in Salmonella spp and the controlling operon termed agf; however subsequent isolation of the homologous operon in E coli led to its being called csg. In the absence of extracellular polysaccharides Tafi appear curled, although when expressed with such polysaccharides their morphology appears as a tangled amorphous matrix. CsgF is one of three putative curli assembly factors appearing to act as a nucleator protein. Unlike eukaryotic amyloid formation, curli biogenesis is a productive pathway requiring a specific assembly machinery.	1.31588e-53
NZ_CP042170.1\|WP_078008251.1\|2614403_2615231_-\|sterol-desaturase-family-protein	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	2.58353e-27

>NZ_CP042170.1|WP_078008255.1|2607297_2607903_+|GNAT-family-N-acetyltransferase
MTTPIFSFSDNIILEDDLVLLRPLQESDVNNLLEISINEPETWKYSLVGADGKENLIKYIQSAIKNREDKKEFPFIVFDKKSQKYAGSTRFYDMNLEFKTLQLGYTWYGSAFRGTGLNKHCKFLLLQFAFETLGMERVEFRADNSNERSIAAMKSIGCKVEGVLRSHMPTIDKEIRRDSIVLSILKNEWFDEVKENLKQKL
>NZ_CP042170.1|WP_078008256.1|2606824_2607181_+|hypothetical-protein
MYELLFWRYLEEVYLNHHEVYEALIEKETVEGLEILPVEVIMNRLNSVFSKWEKVDENSWQNTSGKGAFQVITTPQSIKIDCYGTEGKTMNKLVEVMDEFKLPLYDPQVPERYDEMSE
>NZ_CP042170.1|WP_078008257.1|2605566_2606745_+|phosphoribosylformylglycinamidine-cyclo-ligase
MSSDSSKRYAQRGVSASKEDVHNAIKNIDKGLFPQAFCKIVPDYLTQDEDYCLIMHADGAGTKSSLAYMYWKETGDISVWKGIAQDALIMNIDDLLCVGATDNILLSSTIGRNKNLIPAEVISAIINGTEELINELKSFGVTIHSTGGETADVGDVVRTIIVDSTVTARMKRSDVVDNANIKAGDVIVGLTSFGQATYEKSYNGGMGSNGLTSARHDVFGKYLAKKYPESYDALVPEELIYSGQVNLTDEVENSPINAGQLVLSPTRTYAPIIKKILDTYTPNEIHGMVHCSGGAQTKILHFVQNLHIIKDNLFPVPPLFKLIQEQSKTDWKEMYQVFNCGHRMEIYVPENIAQDIIAISKSFNVDAQIVGRVEAADAKKLTITSEYGTFNY
>NZ_CP042170.1|WP_078008258.1|2603914_2605399_+|hypothetical-protein
MKYLYKITSVLFLLFLVSCSEEKIGESAFGTVTGRVVNADTFEPMENVKILSSPTTSTVFTDADGKFTVSNVKVGEYSFQAQKEGFIAKFEAATVTANNTSQVVFEVKKASANNKPPTVPVLVSPVDNSTAQAVTLDLTWTATDPDKDELIFKITLRNDSNSEVKVYDAIKANKLTLTDLIFGAKYYWQIEVTDGVNTPVLSAVNTFTTIAFPATRYLFVKNINDNNVIFTADDSGKQYKLTSSDRNYWRPRRNNLVKKIAFIGTNGSQNDLYTMNYDGTGIKKLTSSVPIAGFNSDYIGYSWNASGSELIYPNFDKLYKINNDGSGLTKIFQTPNGKFISECDWSADGSKIALKVNDANGYNVEVYVINPSGVVIATILSGQNGAVGGLNFSITGQKIIYTRDVSGFESSNYRQLDSRIFEYSFASGNATQITTEKAAGTNDLDVRYSPNESELIFTNTSNDGISVKNSVKTTLGVVNSRVVLFSGTAMPDWE
>NZ_CP042170.1|WP_078008259.1|2602487_2603849_+|hypothetical-protein
MRLHHYLFIVSGLLFSGCGAYYNQPTGVQKAVLGEGTPATSLLKDLPKPKEQVVVGVYKFRDQTGQYKPQENGSSFSTAVTQGATSILIKALEDSKWFIPIERENIGNLLQERNLIRATRQEYVKNANPNEPQLTPLLYAGVLLEGGIVSYDSNIITGGFGARYFGAGASVKYRQDRVTIYLRMISTSNGKILKSVYISKTILSQAIDESLFRYVNFKRLLEVETGYTTNEPVHMAVTEAIEKAVESLVLEGIKDNIWEADAPKFEVDNLLKVYAEETKTADVTALYGRELENRRSKFAIEISGGATLMDGDYQDPLLRPFGRGALKFFITPGFNISASTNVVNLANKNLLDVGYITYDLNLEWILLPKDRFTPYLYGGGGYATNRKFENAYGKIQYGLGLEYLVSDKIGIKLFGEQNINFSDNVDYIKAGTRDDYYYKFGLGLTYYFGKKKK
>NZ_CP042170.1|WP_065447723.1|2602081_2602486_+|curli-assembly-protein-CsgF
MKFIITLAAFLLISPFINAQALVYKPVNPAFGGDTFNYQWLLSSAEAQNKQKDKTAETKTQTDLERFKANLNSQLLSQISSTLYKQQFGTDGIKEGSYTFGSYSVDVYPSADGLTLNILDTNTGEQTQVIIPNQ
>NZ_CP042170.1|WP_065447965.1|2601801_2602065_+|hypothetical-protein
MGKDFYDRYYYKYNDIGINAEKIVTIGEEYSFARNTSITISIDNEVVYEFLARPDDEFLDAVAEESVNATFTYLKEKEKERKYFTQY
>NZ_CP042170.1|WP_078008260.1|2601331_2601733_+|hypothetical-protein
MRFLYRHITFVFLVFTAIIYGQVPQDKIKAKLEIEKVEGNVKITGTAENLTDVLRGAAYRMSVIKNNNKSNNQSNNDQVGVFTLQPNEKQKLSTSQINISEDDEVVVLLLFYDEDKQIIAKDRVVLGEEKKKM
>NZ_CP042170.1|WP_078008261.1|2600801_2601323_+|hypothetical-protein
MKTFIVNIVVLLLFSPVFYAQEKEDNSDFKPYSSSVFNSKEKAFSVVSSMDKKAQNNLNSKIQSGIQIQQIGDLNKVRAFLKSNETKVAVDQNGDRNELFLDKSAKTLTQNIIQQGNNNKIYDFTLHTNYNVNMEMIQKGDNQNIQSIGTNSLSKNMKITQTGNGASVILINK
>NZ_CP042170.1|WP_078008262.1|2599884_2600733_+|hypothetical-protein
MKKVILSISAMLFVGAAAIAQGNTSSVNQVGNSDTGIVNQNGGTNDSKIDQLGDSNKSEVYQGIQPGVYNAKNNAADVKQKGNNNTAFASQSNHDNKAYQTQTGDWNKATIWQDQIAAPASALGGFDKATQVQTGKHNEAIIDQGTTGNEKPTGAPFNAAQLAAVNAVSVPFAPHNTNEATQTQNGDGNYAYATQGGVKNQSWQTQKAPAGTAVADGNKSYHYQYGEENKATTTQDGTKLKESTLQIGNKNTATVTQTGASHASVAFSLGNMNTITVTQSGM
>NZ_CP042170.1|WP_078008254.1|2608143_2608767_-|hypothetical-protein
MKKYFLFLLFSYSILSFSQKTESYQLTKSEIKERELDQVSDFPIYKAFECSDKSGVYNLLLCENRKSITKKDTLNTKIQAIYTMSDHGGFLEKWRINDLLENTEPKETNIWFWTKYCSTKDLDGDGYIDPVIVYGTRNENNEIRRVKIITVYKNKKYAIRAVECDLDYCRTFKKDANWDSLPPKIKTYVDNLVAKLRKEQDLILHDG
>NZ_CP042170.1|WP_078008253.1|2608946_2611280_+|glycoside-hydrolase-family-92-protein
MNRINCKGFLFGFSFLVIGFGVNAQKKAIEKRNLIQYVDPMIGTAKMGHTYPGATVPFGSVQLSPETDTIAYSLNGKYNGDVYKYCAGYQYEDKTIVGFSHTHFSGTGHSDLGDFLIMPTTGKLQLNPGVASKSLSGYRSAFFHSTEKAEPAYYSVLLEDHKIKAELTATTRVGMHQYTFPKSDEAHIILDLTSGIYNYDKKNVWTFVRIENDTLITGYRQTNGWARTRTVYFAMSFSKPIKSYGQAPLEKSVYRGFWGRFDQTKNFPEMAGQNLKLFFDFNTQEGEKIKIKMALSPVSSAGALENMKKEVPGWDFEKVKKQSQEVWNNELNKIQVETIQKEDLINFYTSMYHAFLGPTEYMDLDGNYKGLDMNVHKAENFKNYTSYSLWDTYRALHPLFNLVQPTRNSDMISSMLAHSDQSVHKMLPIWSHYANENWCMIGYHSVSVIADAIVKGNTNFDPEKALQACVNTAKVPYYDGLEYYMTKGYVPEDKNGASVSKTLEYAYDDWAIAQAAKKLGKTAVYNEFIERSKNYKNVYDAKTGFMRPKLNDGTFKKEFDPLDTHGQGFIEGNSWNYSLYVPQNPAEMIKMMGGNDKFNVRLDSLFSMHLPDKYFENTEDITRDGIIGNYVHGNEPSHHVVYLYNWTNSPWKAQDKIRMILKKMYRNGADGLGGNDDFGQMSAWYIFSSLGFYPVAPGSDEYALGSPLMKKAVFNLENEKTFEVETVNQSDKNVFVSKVLLNGKQLEKPFLKHSDIINGGKITFYMSAKPNKKNYQN
>NZ_CP042170.1|WP_065447731.1|2611490_2611934_+|hypothetical-protein
MKINLKSGIDKLLFGMKQNDVTAAWGKPDKNYVDEDDNVIFVYNAHKIRLTFYQEEDLKLGYLVASSNELEVFGFKLIGRKIADVKKDLATKGITKYTQETFDTFENYFNEDNWFILQTEFDEVVKFEVGAIINDKDEFDWKFPVKK
>NZ_CP042170.1|WP_078008252.1|2612051_2613905_-|peptidase-M61
MKKIFYTLALAVTLWSCKTGSSSGAANVVGVNIDLIDVKEDKVLVTVTPPQIKTDEVIYSIPKTVPGTYSTDNYGKFSDDFKAFDAKGNPLTVKRIDDNSWSISNARSLKKVTYLVGDTFDTEKGTGFGNDDVFSPAGTNINAGINFMVNTHGFVGYFQDKLNVPYKVTITHPETLWGATSMNDEDASNTSDIFTTPRYAVLVENPIMYSKPDYTTFNVNGMDILIAVYSPTGKFTAESITPEMKTMMTAQKNFLGKVNATKKYTVLLYLSSMAKDDAHGFGALEHPTATTVVLPESMPKEKLVESMKDVVSHEFFHIVTPLTVHSKEIQYFDYNAPKMSEHLWMYEGVTEYFANLFQINQGLIDEAEFYTRIADKIEQAKGLNDTMSFTVMSKNVLEQPYKDQYLNVYQKGALIGMCIDIIIREKSNGERGILDLMHKLANEYGVEKPFNDDELFAKITQLTYPEVGEFLTKYVQGTTPIPYDFYLAKVGVGKASEKVPGSIFIKGQNPYITIDKATKVISVRKDLDLNVFFSNLNLKAGDQILTVNEKTYNLDNIYDLITESENWKENDPITIKIKRDGKEQTIKGTVKVPFEEKETFKATDASKEKLKNAWLKG
>NZ_CP042170.1|WP_055098339.1|2614004_2614283_-|DUF2805-domain-containing-protein
MKKSNRKELNWEQTEKLVSLALEEKNPFEIIKKEFGLAEKEVLEIMKKKMPLEKFEMWKKKAIANKPKPKPVKIDDFDEDLDGKYYIKNKLD
>NZ_CP042170.1|WP_078008251.1|2614403_2615231_-|sterol-desaturase-family-protein
MNDIIAYFSTIPSTHRSLILVGGITIFWLIENTFPLFQMKYRKWQHAGINFFLTFTTIIVNFVLAFILIKTANWSTENHFGILQWLPQIPLWLYTIIGLLLLDLIGAYLAHLVQHKIKFLWRFHIVHHTDTWIDTTTANRHHPGESIIRFIFTTLGVLIVGSPMWMVFLYQSLSVIFSQFNHANISLPPKLDAFLSYFIISPNMHKVHHHYVLPYTDSNYGNIFSVWDRIFGTFTTLSKEEIIYGVDTHMETEENNKLHNLLQIPFQKPRSAKNS
>NZ_CP042170.1|WP_078008250.1|2615443_2616151_-|aquaporin-Z
MKKLFAEFFGTYWLVFGGCGSALFAAGIPNLGIGFAGVALAFGLTVLTMAYAVGHISGGHFNPAVSFGLWAGGRFPAKDLIPYIISQCVGALAAAGTLFIIWSGKAGNAINNTQAGAFASNGYGAFSPDGYSLASAFIAEFVLTLFFLLIILGATDKFANGRFAGLAIGLALTLIHLISIPITNTSVNPARSLSQAIFTGGEPLAQVWLFWAAPILGAIVAGFLYKTLLQNHDAA
>NZ_CP042170.1|WP_078008249.1|2616180_2616537_-|DoxX-family-membrane-protein
MNLPWHLYLMAALYIIAGLNHFRNPGMYIRIIPPFFSNPKLMNILSGAAEVILGILLMVSYTTNFAAWGIIALLIAVFPANLFMYQNKKAGFGLPNWILFVRLPLQFVLIFWAYQYTL
>NZ_CP042170.1|WP_078008248.1|2616624_2617521_-|EamA-family-transporter
MSQNNVLKGVFLVAIGATTYGMLATFVKMAYSEGYTTAEVTTSQFILGIIGILLINAFQKAKHKDKVVKATKKNIFSLMLAGTSLGMTSLFYYLAVKYIPVSIGIVLLMQTVWMGVLLEMILEKKLPSKQKVIAVIIVLIGTVLATNIIHNDVALDWRGLAWGVLAAASFTTTMFTANSVATEISSAQRSLYMLLGGAVIVFSFAIATQVTPFNFEIFMKWGIILALFGTIIPPMLMTAGFPLTGIGLGSIVSALELPVSVMMAYILLDEQVVLSQWIGIVLIILAIIIMNVNFKRKN
>NZ_CP042170.1|WP_078008247.1|2617733_2618876_-|peptidylprolyl-isomerase
MKFKFLFLFCLAVVNIQAQTKKPAAKPKAPATKAATKVAPATNPNDGIFATISTTKGDIVVSLEYIKTPVTVANFISLAEGNNPNVKVERLKGKPFYDGLKFHRVINDFMIQGGDPDGNGSGGPGYSFKDEFVEELKFEKGGVLAMANSGPATNGSQFFITHKETPWLNGKHTIFGHVVSGMDNVNKIVQDDVMTKITITRKGDAAKKFNAVKVLADDVKKQEAKKAESQKVVTEKAAYFAATKAKATTTASGLKYVITKKGTGVKGAEGSTIYFHYAGYFDNGNLFDSSIASVAKAYGKYDANRDAQKGYQAFPFTVGKKDGMIPGFIEALDMMTDGEKAIFFLPSNLAYGEKGAGGVIPPNSTLVFEIETYQNQPVTK

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Crispr_ID: NZ_CP042170_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042170_7

3567236-3567367

Orphan

Consensus_repeat	Method
AAGATTTACGTTCCAAAAAGTTACCACAATCTTGTCATCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042170_7

>merge|NZ_CP042170|7|3567236-3567367|CRISPRCasFinder
AAGATTTACGTTCCAAAAAGTTACCACAATCTTGTCATCTCTCCCTTCGGTCGAGATGACAAAAAAATGACATAATTAGCGATGGTCTTTGAAGATTTACGTTCCAAAAAGTTACCACAATCTTGTCATCTC

>NZ_CP042170|7|7|3567236-3567367|CRISPRCasFinder
AAGATTTACGTTCCAAAAAGTTACCACAATCTTGTCATCTC	TCCCTTCGGTCGAGATGACAAAAAAATGACATAATTAGCGATGGTCTTTG
AAGATTTACGTTCCAAAAAGTTACCACAATCTTGTCATCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042170.1\|WP_078007425.1\|3575204_3575771_-\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238496
NZ_CP042170.1\|WP_078007435.1\|3552642_3553401_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP042170.1\|WP_078007423.1\|3577169_3577622_+\|response-regulator	unknown	unknown	gnl\|CDD\|381108
NZ_CP042170.1\|WP_078007604.1\|3573550_3574120_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP042170.1\|WP_078007605.1\|3572177_3572651_-\|DUF4625-domain-containing-protein	unknown	unknown	gnl\|CDD\|379723
NZ_CP042170.1\|WP_078007606.1\|3568795_3569704_-\|DUF4625-domain-containing-protein	unknown	unknown	gnl\|CDD\|379723
NZ_CP042170.1\|WP_078007437.1\|3550466_3550919_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP042170.1\|WP_078007424.1\|3575846_3576809_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|227311
NZ_CP042170.1\|WP_078007433.1\|3554791_3558136_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP042170.1\|WP_078007430.1\|3562891_3563446_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP042170.1\|WP_078007436.1\|3551039_3551684_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078007428.1\|3569735_3572168_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP042170.1\|WP_078007426.1\|3574126_3574789_-\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	unknown	unknown	gnl\|CDD\|235119
NZ_CP042170.1\|WP_078007432.1\|3558161_3560765_-\|zinc-dependent-metalloprotease	unknown	unknown	gnl\|CDD\|379818
NZ_CP042170.1\|WP_065449756.1\|3565039_3566737_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236378
NZ_CP042170.1\|WP_078007431.1\|3560870_3562433_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|377675
NZ_CP042170.1\|WP_078007429.1\|3567536_3568751_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078007422.1\|3578533_3579301_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|226591
NZ_CP042170.1\|WP_065449755.1\|3564046_3565021_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|365989
NZ_CP042170.1\|WP_078007434.1\|3553460_3554780_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|373012

Protein	Function_ID	Function_description	E-value
NZ_CP042170.1\|WP_078007425.1\|3575204_3575771_-\|cysteine-hydrolase	gnl\|CDD\|238496	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.	3.81382e-52
NZ_CP042170.1\|WP_078007435.1\|3552642_3553401_-\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	8.64962e-26
NZ_CP042170.1\|WP_078007604.1\|3573550_3574120_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.29214e-13
NZ_CP042170.1\|WP_078007605.1\|3572177_3572651_-\|DUF4625-domain-containing-protein	gnl\|CDD\|379723	pfam15418, DUF4625, Domain of unknown function (DUF4625). This family contains a likely bacterial Ig-like fold, suggesting it may be a family of lipoproteins.	3.46619e-54
NZ_CP042170.1\|WP_078007606.1\|3568795_3569704_-\|DUF4625-domain-containing-protein	gnl\|CDD\|379723	pfam15418, DUF4625, Domain of unknown function (DUF4625). This family contains a likely bacterial Ig-like fold, suggesting it may be a family of lipoproteins.	6.04512e-21
NZ_CP042170.1\|WP_078007437.1\|3550466_3550919_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	3.79071e-29
NZ_CP042170.1\|WP_078007422.1\|3578533_3579301_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|226591	COG4106, Tam, Trans-aconitate methyltransferase [General function prediction only].	3.43277e-58
NZ_CP042170.1\|WP_078007433.1\|3554791_3558136_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_CP042170.1\|WP_078007428.1\|3569735_3572168_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.77662e-48
NZ_CP042170.1\|WP_078007430.1\|3562891_3563446_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.95951e-16
NZ_CP042170.1\|WP_078007424.1\|3575846_3576809_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	4.60064e-72
NZ_CP042170.1\|WP_078007426.1\|3574126_3574789_-\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	gnl\|CDD\|235119	PRK03353, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional.	2.34942e-125
NZ_CP042170.1\|WP_078007432.1\|3558161_3560765_-\|zinc-dependent-metalloprotease	gnl\|CDD\|379818	pfam16313, DUF4953, Met-zincin. This is a family of uncharacterized proteins that carry the highly characteristic met-zincin mmotif HExxHxxGxxH, the extended zinc-binding domain of metallopeptidases.	2.41121e-143
NZ_CP042170.1\|WP_065449756.1\|3565039_3566737_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236378	PRK09102, PRK09102, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP042170.1\|WP_078007431.1\|3560870_3562433_-\|histidine-kinase	gnl\|CDD\|377675	pfam06580, His_kinase, Histidine kinase. This family represents a region within bacterial histidine kinase enzymes. Two-component signal transduction systems such as those mediated by histidine kinase are integral parts of bacterial cellular regulatory processes, and are used to regulate the expression of genes involved in virulence. Members of this family often contain pfam02518 and/or pfam00672.	8.68621e-25
NZ_CP042170.1\|WP_078007423.1\|3577169_3577622_+\|response-regulator	gnl\|CDD\|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.88588e-36
NZ_CP042170.1\|WP_065449755.1\|3564046_3565021_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|365989	pfam00268, Ribonuc_red_sm, Ribonucleotide reductase, small chain.	7.2063e-67
NZ_CP042170.1\|WP_078007434.1\|3553460_3554780_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|373012	pfam14322, SusD-like_3, Starch-binding associating with outer membrane. SusD is a secreted polysaccharide-binding protein with an N-terminal lipid moiety that allows it to associate with the outer membrane. SusD probably mediates xyloglucan-binding prior to xyloglucan transport in the periplasm for degradation. This domain is found N-terminal to pfam07980.	4.97643e-39

>NZ_CP042170.1|WP_065449756.1|3565039_3566737_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MNTIDTISGNSAPLSEADNKMWWKNSESEQILNRGYLLKGETVEGAIDRICTAAAKRLYKPELKESFVEMIERGWMSISSPVWANMGTERGLPISCFNVHVPDEIEGITHKLGEVIMQTKIGGGTSGYFGELRERGSAVTDNGKSSGAVSFMKLFDTTMDTISQGGVRRGAFAAYLDVDHPDIEEFLKIKSIGNPIQNLFTGICVPDYWMQEMIDGDADKRQVWAKVLESRQQKGLPYIFFSDNVNKNKPQVYKDKNLRINASNLCSEIMLPSSFDESFICCLSSMNLELYEEWKDTEAVKLAIFFLDAVLQEFIEKTEGNYYLAAANRFAKRHRALGLGVLGWHSYLQKNMIPFEGLEAKMKTTEIFKHISDKADKATQDLARIYGEPELLKGYGRRNTTTMAIAPTTSSSAILGQTSPGIEPFSSNYYKAGLSKGNFMRKNKYLKALLEEKGLDNEEVWREIMLNGGSVQHMSQLSQNERDVFKTFKEISQLEIVQQASIRQKYVDQGQSINLNIPSDLPIKEVNRLLIEAWQLGIKSLYYQRSQSVSKELVTSLVTCSSCES
>NZ_CP042170.1|WP_065449755.1|3564046_3565021_+|ribonucleotide-diphosphate-reductase-subunit-beta
MSIFDKRINYKPFEYPEVLQFTEAINKAYWVHSEVDFTADTQDFHSHLNAAEKTAIKNSLLAIAQIEVAVKSFWGNIYEHFPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDEFEKLMEIPVIRKRVDYLSNVLKDTKSQDNKKYVVSLILFSILIENVSLFSQFAILLSFTRFKGYMKNVSNIIAWTSIDEQIHANGGIYIVNKIREEFPDYFDEETLTLIRETVKDSINVEADILDWIFEDGEIETIKKADLVNFMKFRIDESLTQINIPTIFNVPADDYKAMAWFEEEVFANSLDDFFAKRPVEYTKHDKSITANDLF
>NZ_CP042170.1|WP_078007430.1|3562891_3563446_-|GNAT-family-N-acetyltransferase
MIIRKATIEDSEAIAKHLLLAMEEIIYKFIGEKNPKTAYYFLLHFVEYESNQYSYQNCFVAEENDEIVGAVSIYDGGKLHELRKPIIDYVRLNFNPDFSPENETQSGEFYIDALGVSPNHQGKGIGSQLLQFLIEEFVTQNKQTLGLLVEEGNTGAKKLYLKLGFKAVGVKTLVGKTLEHLQIS
>NZ_CP042170.1|WP_078007431.1|3560870_3562433_-|histidine-kinase
MKFTLKNTFSGRNFFILGIIFVVLTLLSIYILSGLMTEVTEKSNAESSQRSFVKKQEVIAQELSRFLESKNELKRIVDISNSKNLSDNLKVLSNIHANDSLVKNNWFQIDNQKIEFTISKNDTHLKASIKDFVAKNRELSQSNSIIEDTDHFFWRIYYRYTAANGTVVRYGYDIDLKSLQTYFSTIDQKAPNYAFVFDKKGTIIYHPEIKLLKKNIFKLTNIAPQDTTFSKREDFSKRIAPSEYLFLDIVRYTKRLNVKGTNWYIGVNFPREISNEDVNAVKKYAYLIYIITTAILIVFFYLFTIFTRRTFQEKEILSQEKNKLLLENEMINKEKALIQLQQLKEQINPHFLFNSLNSLYMLIENNTGVARKFTLNLSKIYRYLINPPLNNIVTVQEELLFIEKYIFLQQTRFNEEFIFTITIEDESFLAKKVPYLAFQIAVENAIKHNIASEESPLCITISINENVVIITNNLNEKQNFGKESKFGHKYLESIYKYYGKNDFKAFKKDGDFTCILPLIG
>NZ_CP042170.1|WP_078007432.1|3558161_3560765_-|zinc-dependent-metalloprotease
MREKALLRSLKNIALVMLVLNTSTMIAQKKNKKNKEDKTEQQVKDSLKNAKGQKYDDLIKKGSFKKGLFNTIQVKTDLYLEINDSLFQREFLVVNKISNVPLPVNDAGLNKGMNYENKIITFHKDLVAKKVWVKSSVPKVSSPVGDAITASVNSNFSESIIEVFDIETKNNDSTSVVIKANKVFDGKQKSFNDVLSNIGFGGSVKSELSYIEGVKTFPKNIVVKSQLTTSVAEGGPALSVTIGVTSNIILLDKVPMQARFSDKRIGYFTEKHWYFSDNQHAVLEKELITRWRLEPKKEDIEKYKRGELVEPKKPIVYYIDPSTPKQWRSYIIEGVRDWQAAFEKAGFKNAVIAKEPTEEDTDFDIDDVRYSVITYVASQKSNAMGPAVVDPRSGEIIESDIIWWHNVMTSLQSWMRIQTGAIDPKARGNKFSDEHMGEAIRFVSSHEVGHTFGLKHNMGASFAYPVESLRSPDFTAKMGGTAPSIMDYARYNYIAQPEDHVEAITPKIGEYDKYAIEWGYRWYADQTEEHNALNALITKHQNDPVYFYGEQQDGDSTIDPRSQSEDLGDDAMKASEYGLKNLKRVVGKILEWTYDKDESYYQTGKLYIGAIGQWNLYNYHVLTNVGGIYLNTTVHGDNKQSYVAVPAAIQKKAVSYLLNNSIKLPEWLFFNPILDKTNPLKDSPLGPYEYTPYTLARELQYGIIYNLLSDDRLLRITENELYQRNEAKENVFTVTQLFKTLHQNIFAPTIQNKSLTIMERMTQKNYVDVLIVSTNKLFEKTDVKKSIQLEATLSMPHLCDYLDEAKMARNINQSSLKRVSEVTSDKKGELNQILQLLKTKRNIGNQETKNHYFDLIQRIEKALNNTL
>NZ_CP042170.1|WP_078007433.1|3554791_3558136_-|SusC/RagA-family-TonB-linked-outer-membrane-protein
MKNLFYMLSFLLALSGYAQERTIKGKVLDAADGLPIPGVTVFVENSSISNNTEQKGVITSASLGTVTDFDGAFEFKINSNIKSLRVSYMGYLPYTIDITDKNQYTISLKSDVSELKEIVVTGYQKIEKRKLTSAVATVDMADIKQAGVASLDQMLIGQVAGVAVTQQTGAPGTISKIRIRGTASLNGAQDPLWVLDGLPLEGNDVPQNYDKDNIDVLSNFSIAGLNPEDIKDITILKDAAATAIYGARAANGVIVVTTKKGRKGSMRVDFNVNTFVTEKPNFSKLNLLNSSQKVDLELSLAAREDLTYRDGNGEISRILKQANELGAYRSGGFSSLSPATQNSINALRDNNTNWGDLLYRSTFNKQYGLSLSGGGERSDYYFSLGAYNEEGATFGTGFDRYNLTLKNNFDVTDKLHVGVGIFGTQSKKTTYVSDTDTFTNPANYSRNVNPYLTPYNADGSYKYDQDMSGYGNGSVYIPYNFLEERENTNYELTTRSVKALLDVDYTITKGLKASTQIGLQFDNNTSEKYTGKDSYFTRKEREKSRVFANGADAYFLPVGGIIQNSNTDFFQYNIKTMLNYSTTLGGKHEIEVMAGNELRRNKSTAINTKGFGFDPKTLTTTQIIFPNANSAANANWRTYLKNENENAFASFFATASYTYDRKYTFFGSVRYDGSDLFGVDPKYKYLPLWAVSGSWAVSEENFLKGNEVVSNLRLRASYGLQGNIDKNTSPYVVGESQTVVILPGQTEPIINVISPPNDKLRWEKTTNTNVGMDLGLFNNRISIVTDVYGRKSSDLIGLQSLPVENGFEYTNANWAQVTNKGYEISLSTRNIDRPNFKWNSTINFAHNKSNVDRIETRSNSYLPSREGLPVNAVFALKTNGIDENGFPLFVNKKGETVNSQTFFALFDPYADFFPGVLSQSRLTDEDTRNLFTYVGDLDPKFTGGFINTFKVHNFDLTIATTFNIKQTVVEKPNFNGAQLDRGQNYTTDVLNVWSPTNTGSHIPGITSETSGTGDSWMAYQWYSPGAAPLNMYNYLDTWVHEMSYMRLSSVRFGYSLPKKATNTLFMDSVRFSIEGRNLFVISSDYKGYFDPETYGNIYAQPIPRSISLGCNLTF
>NZ_CP042170.1|WP_078007434.1|3553460_3554780_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKNILKYVFFAGVAITTVSCDHYLDVEPVGKVIPETLTDYRAIMTKGYSITAIHKALSAIRTDELVLDEFNDNATFYRDHYIWKDVNPDKTTNSFPYSALYNRIFYTNVIINEASAKLAPSAEKDQLIGEAYALRALTYFDLLNIFSKPYNAATAATDKGVPLALKIDLEQAYVPQSVAVIYDQILSDNEEAKKLLNLDTQTTGINYRFSKAALYAMESRIFLYRKEWAKAIAAADKAMTYKSALINLNTTAALPNLYNGPESILALEDPFFNLLKGTSYAAPTLTGVYDKTNDLRFALYYQASGSRFRFKKGGDIAQKCTFRTAELYLTKAEASAQLSDLPTARTTVITFIKNRYTATAFNTLSTSIAAMTQTQLLDFIAQERQREFAVEGHRWFDLRRTTQQQINHTFNDQDYTLIENDPRYTLPFPLDARLNNPEL
>NZ_CP042170.1|WP_078007435.1|3552642_3553401_-|response-regulator-transcription-factor
MKVVIIEDEHLASSYLKSILEQQSIISINEITVLKSVKDAVAFFKVNTVDLAFMDIHLGDGKSLDIFEQAIVSCPVIFITAYDSYAVKVFKHFTIDYLLKPYEEEELHEALLKYKNIKETFNTNLIVESLVEIENQSSVQQHFLVNHRDKLLSINDTSITYFYATGKHLFIYTDSGSNYLYNSNLKDLINKLNPDIFFKINRKYIINRLHIQEIIKHSSQKIEILLNVAIPDTEPIILSKKEINNFKNWLDS
>NZ_CP042170.1|WP_078007436.1|3551039_3551684_-|hypothetical-protein
MKKILLISVIVVIAFYVLKEKVYKPFMWKKALNTKEHQLQLGSFIFSKETGINGSQSYQKYYFVFKVIEINGDYVRLSVIRQLSDKDNLKESDFSTTSKQYKSLKQNIKSLTITPILFDDLYQGDGPRFTLNEYLLNKYPVLKRSRYYYEDIPEASKNKPMPENPNDLEMYFSMVYSKKEIIEKGQLVPWTMTNSFNGKPLLSNYSKNIDLIIN
>NZ_CP042170.1|WP_078007437.1|3550466_3550919_-|carboxymuconolactone-decarboxylase-family-protein
METRINAFEKGQKALSTLFAITGYIKKSGLEKSLLDLVDFRVSQINSCAYCLDMHSKEALATGETPQRLFGLSAWRETPYYTSRERAALAWAEAVTACQVHDDVYAVAKSEFSDEELIDLTLVITTINTWNRFNLAFPNTPGTYRVGQFG
>NZ_CP042170.1|WP_078007429.1|3567536_3568751_-|hypothetical-protein
MKNNYFKLIFLFALSIFAVSCSNDDDNTTETPEETLAEYKYLRILLSDEKTTAITLVNPVDATITSFNAKFAKSALYTTESGRYAGIVHRADNTVETFDSGFESHGDHVDVDGIPKFGALTGQSLLPTHFKSKMGELLTFNDGDGSLSVAKESEINTAGAKFKVINAGLLAHHGAMATFSNGTYAITQKDNSVAGTLPEKVKIIDNAGKTLFESTVATKGIHGNASDGTYAVFGSASGVLVVESSGKQKLIALPEDFGTAWFGTILETKAKGKFIGFTAAKGAYLIDVAAATIKPILQSTKIMQCKVSYNNSKLGILLFSGEFKLFNLTSLQVEKEAKVIPETASDATSKPQIQLTENFAYITSPSTGELFQLNLSTMAIAKKIKVSNTPYTITILGFENSKSH
>NZ_CP042170.1|WP_078007606.1|3568795_3569704_-|DUF4625-domain-containing-protein
MKKAKLFLLFFVVATGFTACNNDNDDNNEVLKPTATNVEIGTGNNKKALIGRDFHFNADVLAGDKIADVQIKILPKKGETYSKDWKFELSFAEYKGAKNTNVHKHFNIPADAPEGKFDFSFIVLDENGSQLEIKEEVTITDPANMPADPLIGRDMLSRNDDLIYYMETWVEPELIFKKNDKITAHAQVSQIMGDGILYSVLIKKSLNYHPESIDNLDFKKVIVISKVEHKGLAPASKIATLQKINDVWGGESIVVGADKDAEGNPTTADKSWQSGQYNWVILYKNTSYNLSVYKSMPVTINF
>NZ_CP042170.1|WP_078007428.1|3569735_3572168_-|TonB-dependent-receptor
MNENKPNLLPQLLLLLCCFAIIPKVAAQSVRVSGSVFSDGQKPLEGAIVTLYPSAISTLTDQKGNFFFAQIPKDSQKLSVSHSAYSLYEMKLSLDQNSNTIPPVFLHPEIKQLQEVVITDQYESRRKKQESLTIESVNSSFIQRNLSGSLMQSLQRIPGVKTISIGSGGSKPLIRGLSFNQVIVVENGIKHEGQQWGADHGLEIDQYAVNRVEIIKGPSSFMYGSDAIGGAINIKPVPFPAQHVLGGSVDFTGKSNNEQFGGSFNLFGRNEKWFFDTRITAMDYGDYRVPTNIVQVYNYAVPLYKNHLRNTAGREMDVHGSVGYVSDRLKSVFYISNIYTKSGFFANAHGLEPRNVDTELHDKSTRDILMPFQEVTHTKISNTTSFTLGIHKLETQLGFQQNFRREWSHYVNHGYMPPIYPDDMYAPKDLERQYDKEVFSVAFKDEFSLGKHQFTAGLNGEQQQNAINGWSFLIPAFKQSNAGLFVYDKFQLNDLWLLHGAIRLDHGQIEMKPYTDWFQSEVTENGQTTQQYLQRSQELTRTFNSFNWSAGVNYTPGQLSLKANLGTSFRMPIAKELASNGVNYHYFRFEKGDPNLSAERSYQLDLGMEWQENKWSVQLSPFFNYFPNYIYLNPTSQHDIYYGAGNQVFEYEQSKVMRYGGELQTRYQFLKNLSGEILAEYLYSEQLSGSKKGYTLPFSPPASVLFGMTYNPEIKNLKDTYFSLDYRYTAQQNQIVPPERKTAASNVFNLAMGTKAKAGQQDFIISLQVQNLFNTKYLNHTSFYRLIELPEASRNIILSVKIPFLIHKSI
>NZ_CP042170.1|WP_078007605.1|3572177_3572651_-|DUF4625-domain-containing-protein
MKQTKILVVVLLSVFALASCSSDNNEIDTEYPVIDNSATNAFPIQCSEITRGQKITFRAKFTDNAALGSYSLDIHHNFDHHTHSTEVNNCTADPIKKPVNPLLYINSVTIPNGQKSYEAIQEITIPTDIDPGDYHFMIRLTDKEGWQTIKGLSIKIL
>NZ_CP042170.1|WP_078007604.1|3573550_3574120_-|Crp/Fnr-family-transcriptional-regulator
MYEQLGDYIKNRIEVSDENLNTILSYFKPLKQDKNDLLLSAGQTSQHTYFVGKGCLRLYFINEEGKDVTRYIAFENQIATALVSFITKLPSLEYIQVIEKSDLLYISHEDFNHLLKTIPEWMPFYCSYLEKAYVNNTNRLMSFTTMDALERYQWLLKINPTIVKRLPNKIVASYINVSQKTLSRLKSKF
>NZ_CP042170.1|WP_078007426.1|3574126_3574789_-|3,4-dihydroxy-2-butanone-4-phosphate-synthase
MISTLTYPLEKFGLTSIQRVENALQHLQNGKGILLTDDEDRENEGDLIFSAQHINVQNMAMMIRECSGIVCLCLPNEKADQLELPYMVQENTSSFQTPFTITIEAKEGVTTGVSAADRITTIKATSAVNAKATDLARPGHIFPLRAKNNGVLERNGHTEGSVDLMKLAGLQPEAVLCELMNEDGSMAKLDKIISFAEEHDLVVLSIEDIIYYRKFVRDYK
>NZ_CP042170.1|WP_078007425.1|3575204_3575771_-|cysteine-hydrolase
MKLRDQDTALILIDVQKGFNEENYWGGNRNNKDAETKMAQILEQWRTLKLPVFHIVHSSIHSDSKLHALQPGFEIKNEVKPIVGEPVISKNVNSAFIGTDLKERLDNLGITTLVIVGLTTNHCVSTTTRMAGNYGFDVYLISDATATFDRVGINGEKYDSELVHQISLASLHNEFAEVIDTKTLLTLV
>NZ_CP042170.1|WP_078007424.1|3575846_3576809_-|helix-turn-helix-domain-containing-protein
MKDTITTIYFYIPQQVTLLDLSGVVEVFQEAIGLGLQYQLKYISSQSSVICSSGLELAALTHFSKTNPQENDIVVISGSSTHQIDLNAEDASFFEWLQKVNKNETTICSICSGAFLLAKAGLLDHKECTTHWKLVDKLKKDFPLAQTQSNTLFTQSGTIYTSAGIITGIDLALHIIEQRHNKEIAATIAKELVVYKRRHGNDEQESVYLQNRNHRDEKIHVIQDWIISNLDKTATIDFLAELVHIGPRNLTRIFKKQTGITIAEYRTKLRIEKAESLLTNADYKIEHIAHLCGYKTSKQLRVVLESHLDTLPSAIKNKWS
>NZ_CP042170.1|WP_078007423.1|3577169_3577622_+|response-regulator
MNAKMNIKILLTDDDEDDRDFFAEALEDLDLDYPIEFCKNGVELLDRLYDANLPIPDIIFLDLNMPILSGFETLQQIRENDKFKDIPVIAIYSTSATVDGIKSTFGLGANAYVVKPLAFNDLKILLKKVIELDWTEKLSDASIETFVITV
>NZ_CP042170.1|WP_078007422.1|3578533_3579301_+|methyltransferase-domain-containing-protein
MPWNPEIYNKFKNIRYQPFYDLAEFIEPVNGMKAIDLGCGTGEQTAILADKFKEADFLGVDSSAEMLEKSKALATDRLHFRKATTEETLASGEKWDLIFSNAALQWSNDHATLFPELIQLLNSKGQFAVQMPVQPENKLNEILAELVDEEPFKSYLKDYKRDSPVLSIDEYAQILFDGGLEDIQILQKVYPIIANDHETLYNFISGSALIPYIERLEGEQKALFITTYKERIAEYFPKLPAIYSFKRLLLYGRKK

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Crispr_ID: NZ_CP042170_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042170_8

5403009-5403087

Orphan

Consensus_repeat	Method
AAGTTTTTTATTCTCTTTGTCTGG	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NZ_CP042170_8

>merge|NZ_CP042170|8|5403009-5403087|CRISPRCasFinder
AAGTTTTTTATTCTCTTTGTCTGGTTTTTTTTTGCCACTAAGGCACTAAGACGCTAAGTTTTTTGTTCTCTTTGTCTGG

>NZ_CP042170|8|8|5403009-5403087|CRISPRCasFinder
AAGTTTTTTATTCTCTTTGTCTGG	TTTTTTTTTGCCACTAAGGCACTAAGACGCT
AAGTTTTTTGTTCTCTTTGTCTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042170.1\|WP_078005487.1\|5403177_5404050_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|222856
NZ_CP042170.1\|WP_078005490.1\|5408204_5408819_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226789
NZ_CP042170.1\|WP_065450541.1\|5410355_5410814_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP042170.1\|WP_073395273.1\|5413371_5414553_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|181626
NZ_CP042170.1\|WP_078005492.1\|5410884_5413275_+\|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|224170
NZ_CP042170.1\|WP_078005482.1\|5392566_5395659_+\|WGR-domain-containing-protein	unknown	unknown	gnl\|CDD\|153425
NZ_CP042170.1\|WP_078005489.1\|5405322_5407563_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|132992
NZ_CP042170.1\|WP_078005484.1\|5397274_5400670_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078005486.1\|5402471_5402972_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078005479.1\|5388370_5388802_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078005485.1\|5400670_5401063_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078005477.1\|5385988_5386231_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP042170.1\|WP_078005483.1\|5395665_5396994_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078005491.1\|5409096_5410134_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_CP042170.1\|WP_078005493.1\|5414683_5415049_+\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|319869
NZ_CP042170.1\|WP_078005488.1\|5404051_5405068_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370539
NZ_CP042170.1\|WP_078005478.1\|5386425_5388138_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078005481.1\|5390854_5391433_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078005480.1\|5388982_5390764_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|223953
NZ_CP042170.1\|WP_078005494.1\|5415080_5416886_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173850

Protein	Function_ID	Function_description	E-value
NZ_CP042170.1\|WP_078005487.1\|5403177_5404050_-\|AAA-family-ATPase	gnl\|CDD\|222856	PHA02530, pseT, polynucleotide kinase; Provisional.	1.4044e-86
NZ_CP042170.1\|WP_078005490.1\|5408204_5408819_+\|hypothetical-protein	gnl\|CDD\|226789	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown].	1.89075e-34
NZ_CP042170.1\|WP_065450541.1\|5410355_5410814_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.61222e-15
NZ_CP042170.1\|WP_078005492.1\|5410884_5413275_+\|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|224170	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism].	2.98491e-84
NZ_CP042170.1\|WP_073395273.1\|5413371_5414553_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|181626	PRK09052, PRK09052, acetyl-CoA C-acyltransferase.	0
NZ_CP042170.1\|WP_078005482.1\|5392566_5395659_+\|WGR-domain-containing-protein	gnl\|CDD\|153425	cd07996, WGR_MMR_like, WGR domain of molybdate metabolism regulator and related proteins. The WGR domain is found in the putative Escherichia coli molybdate metabolism regulator and related bacterial proteins, as well as in various other bacterial proteins of unknown function. It has been called WGR after the most conserved central motif of the domain. The domain appears to occur in single-domain proteins and in a variety of domain architectures, together with ATP-dependent DNA ligase domains, WD40 repeats, leucine-rich repeats, and other domains. It has been proposed to function as a nucleic acid binding domain.	3.02116e-18
NZ_CP042170.1\|WP_078005489.1\|5405322_5407563_-\|hypothetical-protein	gnl\|CDD\|132992	cd06974, TerD_like, Uncharacterized proteins involved in stress response, similar to tellurium resistance terD. Tellurium resistance terD like proteins. This family is composed of uncharacterized proteins involved in stress response, such as the tellurium resistance proteins, chemical-damaging agent resistance proteins, and general stress proteins from a variety of organisms. The tellurium resistance proteins are homologous terA,-D,-E,-F,-Z,-X gene products, which confer tellurium resistance mediated by plasmids. Currently, the biochemical mechanism of tellurium resistance remains unknown. The family also contains several ter gene homologues, YceC, YceD, YceE, for which there is no clear evidence for any involvement in the tellurium resistance. A putative cAMP-binding protin CABP1 shows a significant similarity to the terD protein and is also included in this family.	6.86718e-05
NZ_CP042170.1\|WP_078005477.1\|5385988_5386231_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.55802e-16
NZ_CP042170.1\|WP_078005491.1\|5409096_5410134_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	2.8816e-28
NZ_CP042170.1\|WP_078005493.1\|5414683_5415049_+\|four-helix-bundle-protein	gnl\|CDD\|319869	cd16377, 23S_rRNA_IVP_like, 23S rRNA-intervening sequence protein and similar proteins. A family of functionally uncharacterized bacterial proteins, some of which are encoded by an atypically large intervening sequence present within some 23S rRNA genes. The distantly related bAvd protein, which also forms a homopentamer of four-helix bundles, has been suggested to interact with nucleic acids and a reverse transcriptase.	3.91885e-43
NZ_CP042170.1\|WP_078005488.1\|5404051_5405068_-\|hypothetical-protein	gnl\|CDD\|370539	pfam09511, RNA_lig_T4_1, RNA ligase. Members of this family include T4 phage proteins with ATP-dependent RNA ligase activity. Host defense to phage may include cleavage and inactivation of specific tRNA molecules; members of this family act to reverse this RNA damage. The enzyme is adenylated, transiently, on a Lys residue in a motif KXDGSL. This family also includes fungal tRNA ligases that have adenylyltransferase activity. tRNA ligases are enzymes required for the splicing of precursor tRNA molecules containing introns.i.	1.51354e-19
NZ_CP042170.1\|WP_078005480.1\|5388982_5390764_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|223953	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism].	0
NZ_CP042170.1\|WP_078005494.1\|5415080_5416886_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173850	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase. VLCAD is an acyl-CoA dehydrogenase (ACAD), which is found in the mitochondria of eukaryotes and in some bacteria. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. VLCAD acts as a homodimer.	6.8934e-133

>NZ_CP042170.1|WP_078005486.1|5402471_5402972_-|hypothetical-protein
MELVNKDFEILTDYILTFHSYKYLNIDLIEDWAIELINSGYESEAIYNLACFYKPIDSGEVQPYLEAVLSELNLTTKNKEESQKSHIRYFLNKVAKHDDVRGNLKRMLHLYCDFDVDKDIIDLSVLDDAWDDLIAGQVNWYYKDVSLDTIEQEVIVMAQKWLYENL
>NZ_CP042170.1|WP_078005485.1|5400670_5401063_-|hypothetical-protein
MEPITMAVITPFLIELGKKGYEKFTEKGINSISEGAITWIKSLFIKDEKPKKALLELQEQPENKEKQNIVKAIIENSIEDNPEFAIYLKELIEKLPKNTNIISSTKNVITGNVNTGGGSFINGDNNQIVN
>NZ_CP042170.1|WP_078005484.1|5397274_5400670_-|hypothetical-protein
MEYNKNIIGSAETQGGDVINGDNNILIKIVDGLSLLLNDYKKQLDEFNSLILAFKPKTALDLIINLEKRVNENSSKSDNKITSKIYFLKGLCKRELEGFPKEESALDFIKAYNLNNEDEELKIRACIEYLNISEKSKAIDLANNILLLDNYNLTAWFVKSVTSDDIKSFLQSVPKIVHDNYTFQHNIIYFLLGKKNNNLKDYGLKLSFDFNKYVEVTFENRPAWIICLDLLMTTIINRLPKKYVSGENFIIQDDPELVKAIDLLEVYINRLELTEISNTSKHQKFFLNYLKYLSTNDDLYFKSVGQHYNELAKPHWFYTLFYCQLTNHKKEFELSLYNLLEYERVKGELHLEFYLFKFIVLHFLSKDEEIEKLYTKYLNSISIIDYRHLFILIDILDIVQQHTDGNDKFIVQFNKVLEKRFDVDDLKVLLKATIELKCIGYNDKGAILSSLDSIKESNLIDNNCKNLIAENLNKLGKPLDSLNLMDTYIDKTVISESLKLYIFILQSLLQNKEETPKGKAQELLKLLKFWREESNYIEESLLRIEHDLYAKINDLDNLEKVDKLLYCNFPENFSYLYFYLTVLERKSSFNEVKEISLSIPTVYDDERLGIAISGVLLRNKNNVKKGFEILYKLAIDQNNTEARQNYFAGSLLFNDHFENYNSVELGHWVIHIVDGKIEKRKIVKAEGIQKDFLGKKVGDKFINVNVLTNKESIIEIKEIFNDALNLFRDIANEAENPINELGLQSLKIPDDINEFPKFLVEQFGSIGTTEKIRKDNLLNDYYNSRIGFLAIVHTVFKGKFIEAYLNLTNNKDSRFTTIPNIFTAKLQKEEGILKFVLDFSTLVLFYYLEIELKFKFKHKFIISQNTKCQIQNEIILINNSPESTLSVNVTTEGVRNHFYPDDINNQRVVFLQSIINWIDNNCEIDLVAEKLDVVLKLTRKEEIENSIIDNMIDSLHLSIRENHRIVSSDIAVFLFETNKGNNNFLNPEKYLLTYYFENCNYSFYRFLLKSNYLGIDINFETLKNEFSAFKNGKENYYLLVLENLQFSVNNNPDVIILSIEFLEYIYFDNLISITDKNNYAFQLFINIFNGMSVELIRQYQSCLINKSTLFGNYYDHIFNEFTRVKTMSIKS
>NZ_CP042170.1|WP_078005483.1|5395665_5396994_+|hypothetical-protein
MTDLEYNYKGISTYSKTKGINNLVLAHQTEIEEVNNIPCFFWGNLTDPYVTAKCWTTIAKVVRSSFGPVPPSLRDPIVSAGSERLRFEGFSSCNGVYVRLDMKPEAIDGEFIANGTTNVDFNDPMLNALNAIQKNEKVTLAVGQQDVQVITSKTKVTEKKVTLPMRWIKGLTSVQLYLADMDIKFELNKIQTIQLFQSLPKGTVKGDFFITKRAGKFMFSTLATADSVRIGGVQRLRLLEGILAIVDKIFIYESTDKQTCAIVAEFGKMQLLMAFSPDSYRGFSGEGNVLETMTENLPIEWVYGLNSLLKSNETFDPTMLSIENDIDFGTMDNLTSNLSSMGLLGYDLSEKAHFYRRLPFKTERILSLNPRLKNAKKLLANEDIEIVERRADYIEAKVKGSGVVHKVIIDHNSQRCTCDWFTAYQGKRGICKHILGVKMMIS
>NZ_CP042170.1|WP_078005482.1|5392566_5395659_+|WGR-domain-containing-protein
MKKYLKYIDGNSDKFWQIEVTGLEYTVTYGKNGTSGTSQTKSFSTDEECLKSAEKILAEKVKKGYSETGDVAVASKPKTAKSAKSDEVLEEYDAIVKSKNIDLLLPFLKEKSKGNIEALKKLIKKSKRYFMTYTDLTKDPGYVKKDKHDYGWGTRGDKKQSDIITLSAIALFDKADINSWDEALSLLNEIDEKPQVMEVLLWAKPNWLDTFILDKVKRQDWVGFNYHTLRQLEEQHLLVFNPELYALTLAATNEWRAKMKTRRFINNSLNDQLTWKRDIPELFNYETILHNSFFRENDKQKHDEFQTWAVIYKSLLDEKKMERAFFIENAIQIQTKEWNNNLKSFFRKRIEEFNVTADELILYQENIFSFLHNPYPPITSYGIELIKKIYDHPKFKTKSFLEWLEPLMMRSDCKAAIKNVLPILEKINKSNPKLSATISSIIADVYVIADLALQERATKIITKIANVKDKVLKEKLSSYVTLMQGNIKSGLTQFLDEDALAVDDAAHEEYTFEPQQELLLTEEVQLPKDWNDVVFQFGNFINSEETVDSEILLNIYISQRDLFPADYSAQLQPYEKQLQKHYFEATHKNFVKAFLQSKIANIDNKFNSKVNHYSKIITTLLMQPLMEKVQQKIDSNSTLPLLSFPSHKPYWVAPKVLLERVIAYQNTKEEIDAVDLAIAIARMPRENVEEAIPLLDKIEGELKPLLSFCLGVNEKVELDDTSLFSKLLATMGKTTKETGNLSLWAVAARTFYPNDTFPEFENTYLKEIPFVVSPFKPKVEFKEKWNEWTNYQTKEKERTPSWYELGFDLPNYSKIPNYLLYSQDVYKRSNTWDYNINYAGNTYFWHSLTPQNSDALALTLLHNCNIADGAKPELKGFLDVINRPEFRFSDISLLLYACCFFQEKKDLRLMASEVLIHLIEKQTIDIELFAQKIAYLATEKYGVFLRLVDGLIAIKDVSPLHNNALLKLLNAFFANLDLKDKLPTNFKKIIENYLDILTKTNQKPSAEAIVFFEKWKDNASLKSLIKQILK
>NZ_CP042170.1|WP_078005481.1|5390854_5391433_-|hypothetical-protein
MNNNTLDRYKKEIRKKYEIEKEGEYFDYLYSPSRGKLRDFCWLIFENGVSQEDLNVFRNLFSIDFDYTKKKKFKDQKDKFRPIETFLKGETDPSNIDAINLTAVMVDFQPRPFKNFNKACRMEDARQVENSYNTKTAVEAEKKIRKIAAFAENEKSGEYAGKKRLFSNFATLFSKKGDQKSYPEKAIRFSSG
>NZ_CP042170.1|WP_078005480.1|5388982_5390764_+|long-chain-fatty-acid--CoA-ligase
MVSITRLFDFPYYQQETYNLPVALATKKNGVWEKTSSQEYIAKANAISRALLRIGVQKDDKIALITSNNRTEWNIMDIGILQTGAQNVPIYPTIAEEDYEYILNHSGSIYCFVSDEEVLNKVNAIKANVPQLKEVYSFNEIAGCKHWTELLTLGEDESNQNEVEARKDSIKTDDLATIIYTSGTTGRPKGVMLSHQNIVSNVLDSAPRIPFDPGKSTALSFLPICHIFERMILYIYQYYGVSVYFGESIDKISDNLKEVRPTVITAVPRLLEKVYDKIYAKGGELTGIKKKLFFWAIDLGLRYEPYGANGFWYEFQLKIARKLIFSKWKEGLGGNLELMVSGSAALQPRLTRVFAAAEIPVMEGYGLSETSPVIAVNDQRNKGFKIGTVGKVIRNVEVKIAQDGEILCKGPNVMLGYFKDPEKTAEALQDGYFHTGDIGEIDSEGFLKITDRKKEMFKTSGGKYIAPQLIENAMKQSRFIEQIMVIGDGEKMPAAFIQPNFDFVKEWARLHKVTLGSSNAEISSNADVIKRIDEEVEKINEKFGHWEKIKRFELTPDVWSIDGGQLTPTLKLKRKIIKEIYKDLYAKIYGQNS
>NZ_CP042170.1|WP_078005479.1|5388370_5388802_+|hypothetical-protein
MKSLHLLLITLFFVAAQSHAQVHVDQITYNGRDHYITTTIGYPVPGTYIPTGQKAPSTILNPDGTGVIQADDLSKTKINWGIECTDEGIPVFKEGFNSASYTFWYRTNDSDAWIYSQFSIHFAKKKMFLMGERVKEYVDYNVQ
>NZ_CP042170.1|WP_078005478.1|5386425_5388138_+|hypothetical-protein
MKKLLQLIVFLSFAPFSWAQITDPEKKSLEQLSADFAKINISYQAEIAKLTNLKSSISENSDPTSLSKTLSDQLEESKKYKLQLDSIYELYLSYKKIYLSKGIKEDDIDKIFPQRYTISNTKNSENIPDTKTYIYFGKGKVIEEKDSLFKNENANIIFEDILNAKSESYLGDFTIPKNEQKVPYEYVTRERGFLKKKQKTKAQSYLKFKSIKIHLYEGSLYDIKLIVTDNNNKEYLFENQHPVSLLRYSIRNFNRFLYCNPIEIESPLEKVTDENKLLYYQIRLSDVLEYVANPGNNYVPEDEVLEFPSIIKDVETNKNQPVKYKMIANTALQNIVELRTYTDFLGLFSDDTPNGVIQLEGKGDFYVAPFNPNNTTLYIFKKISPFVNFSRIDKDIRNLTLEEAPDNKFTIQNSLQIVEKSYLQMGLNLSFISFKIAKEYPFEINFYGTTKYQISDVMSENKAVNYKSLGIGGGIALEFKRYNNFGFIYSAELTNYNSKSFNDFKDIINPASFLVFQNKAEVYFFPGETKQQAIFLRFKTFNNSEKDNNEAFYQLQFGYRFSIGIGKIKD
>NZ_CP042170.1|WP_078005477.1|5385988_5386231_+|response-regulator-transcription-factor
MDSKNQSYIEKQKSHYLNQFTKREIDIIKYIGDGLNNTEIGQKLFISTLTVKKHRNNILVKSNCKNTAQLIKQTVLQGLI
>NZ_CP042170.1|WP_078005487.1|5403177_5404050_-|AAA-family-ATPase
MRKVILMKGLPGSGKSTLAKKIIAENPETYKRINRDDLRAMFDNGNTSDKNEKFVKKVRDLLIVNALEEGKSIVIDDTNLSETNLRRVSQLVQEYNTKFNEKVEIEVMEVNTDVAVCLERDALREKPVGEKVIRKMHRQFFKDSPEYCPQNSDLPKAIICDLDGTLALMNGRNPFDASKCDEDEINNPVANVLRNYKKLGYEILLVSGREDRYKEPTLRFLEKHEIEYDDLIMRKTKDSRKDSIIKTEIYNEFIKDKYFVEFVLDDRNQVVDTWRNDLKLPCFQVYYGDF
>NZ_CP042170.1|WP_078005488.1|5404051_5405068_-|hypothetical-protein
MNTTLLKEMISKNYVRVNKHPEHDLYIYNYTQNAQFERIWNEVTLACRGLILDKNENVVARPFPKFFNLGELENQILPESTFEVYDKMDGSMGILYWIDEVAFMASRGSFASDQSDKANEMLHGKYRNSWPLLDKNKTYLFEIIYPENRIVLDYGAAEELVLLAIIHTKSGEEFPLEDIGFPVVEKYDGVKDILTLKEMNIANKEGFIIKYANNFRVKIKFDEYLRLHRIITQVSNLNIWEYLKTNQSMEEILERVPDEFFDWVKQTKRDLENKYSVIEVQCKADFKVLESRKETALYFMTCQYPGVLFAMLNNKNYSEIIWKMIRPVFEKPFNREEE
>NZ_CP042170.1|WP_078005489.1|5405322_5407563_-|hypothetical-protein
MKTQELLKISLRQNAIFIPSEMIANDDKNLSGTTTVLAANVSKLGFTFSESLLHALNNVNPNYKVEVLEVLREVLGTAKNWAPLVKEWNIPTGESAIDHVATFFANFFQTKNGTTLQCGHIIPNNTFPLERYNGCPFCGTPFEFGKIENYGQGSKLKVLDLWSEKELEDFYKSLLQSKTALDATQADSLKMALKYLPLPKVDIAMKETLMLVIDVLIEEGKAENACQYFKSPTDILRYLWFKNTGLLQIIEPKTIIKRISKNATHFYNPLDTSAQAKVASQKDLKLKYSRKECLMVASWLNNLDMDVETMCEMMHPKRGMWVRFIRALRLAEYSKRKGFEKLAFLMDVFYNQVYDVWQSKVNSSRLKFDADKTFALLKQRPGLFARSLFSNMLWFGADETVAHFEEIIDKVPARLVFTLNMYAQNYFDKNMQRSVKPLGGTNKRIAPNGLLKLYDDDQLEAMKNQIEELCVLAMKKRFAAIANKNKTIYIDPQLFNMPVSIGDRSENVQDLPVALMGTRFPIEGNEVRLFMQWGAGLPAQHMDMDLSCHIAYEDKADICSYHRLETIGCKHSGDIRSIPAKIGTAEYININIDDLAKAKAKFVTFTCNAFSNGSITPNLVVGWMNSKHPMKISEKTGVAYDPSCVDHQVRVTQNVAKGLVFGVLDVAKREIIWLEMTFGGQVVQGLDFKGVQALLAKLSSKLNIGSLLQLKAEAQGLTIIQDQNADEVYDAQWAINAAAVTQLLID
>NZ_CP042170.1|WP_078005490.1|5408204_5408819_+|hypothetical-protein
MNLDRIYSELLSNIGFSANEIQKNWMDLEKAYSKKSRHYHNLAHIKDMIASFDNYHNQLDNPNEILFSIFYHDVVYSASKKNNELKSAEYALAILPENTTLNKQLVFDAICATQQHQHNVIEDINWLIDFDLKILARDWDDYQIYFEQIRKEYSIYPDFLYKPGRAKALKHFLENEFIFQTDEFRKLYEDKARFNIEKEILLLT
>NZ_CP042170.1|WP_078005491.1|5409096_5410134_+|WYL-domain-containing-protein
MSQNKNALIRYKTIDKCLQNKYRQWTLEDLIECCSEALFEYEGRENPISKRTIQMDIQLMRSEKLGYNAPIIVYDKKYYKYEDDEFSITDIPLTETDMNVLTETVSMLKQFKDFSLFNDVSDILQRLEDKIYAEKSHTKPVIYLDKNDNLKGLHYLDEVYQAIIKKIVLVITYKSFKSREENKFHFHPFILKEFNNRWFLVGKKKGSQPIANLALDRIISIDYDFNLPYLEEDFDADLFYKNVIGVTVNTGSQPRRIELWIDPVNAPYVLTKPLHSSQRLIKQNEDQSIIVHIFLTPNYEMERILLGFGDGIEVIKPENLRNRMKKILEKAISRYSTEDKTELNA
>NZ_CP042170.1|WP_065450541.1|5410355_5410814_+|MarR-family-transcriptional-regulator
MKEKTIDYILRATWQAVSRMYNEEAAKYDATMATGFALLSIDKEEGTPSTALGPRMGMEATSLTRTLKSMEDKGLIVRKKNPTDGRGVLIYLTEFGKEKRDLSKNTVLKFNETVRKHVSDEKLKHFIEVSEIINELIQDKNIFNQTEKIENE
>NZ_CP042170.1|WP_078005492.1|5410884_5413275_+|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein
MKRTIKKVAVIGSGIMGSGIACHFANIGVEVLLLDIVPRELTEAEAKKGLTLESKAVRNRVVNEHLANSLKSKPSPIYSQKFASRITTGNTTDDMAKIANVDWIIEVVVERLDIKKLVFEQIEKFRTPGTLVTSNTSGIPIHFMSEGRSEDFQQHFCGTHFFNPARYLKLFEIIPGPKTSTEVLDFLNEYGSKFLGKTSVVAKDTPAFIGNRIGIYGIQSLFHLVKEMGLTIEEVDKLTGPVIGRPKSATFRTVDVVGLDTLVHVANGIYENCPTDEQHELFKLPDFVNKMMENKWLGSKTGQGFYKKVDKDILSLDLDTLEYRAAKKASFATLELTKTIDKPIDRFKVLVKGKDKAGEFYRKSFSGMFAYVSNRIPEISDELYKIDDAMKAGFGWENGPFEIWDAIGVANGIEIMKAEGLEPAAWVTEMLASGSDSFYTVKEGASYFYNIPTKSQVKVPGQDSFIILNNIRESKKVWSNSGAIIQDLGDGILNLEFQSKMNTIGGDVLQAINKAIDLSEKEYQGLVIGNQAANFSVGANIGMIFMMAVEQEYDELNMAIKMFQDTMMRVRYSSIPVVVAPHGMTFGGGCEMSLHADKVVAAAETYMGLVEFGVGVLPGGGGSKEMALRASDLFRKNDVELNVLQEYFLTIAMAKVSTSGYEAFDTGLLQHGKDVIVVNKDRQIAEAKKHALLMAEAGYTQPIKRTDVKVLGKQALGMFLVGTDQMEAGKYISEHDKKIANKLAYVMAGGDLSEATLVSEQYLLDIEREAFLSLCTERKTLERIQYMLTKGKPLRN
>NZ_CP042170.1|WP_073395273.1|5413371_5414553_+|acetyl-CoA-C-acyltransferase
MKTAYIVKAYRTAVGKAPKGVFRFKRPDELAAETIQFMMDELPDFDKKRIDDVMVGNAMPEAEQGLNVGRLISLMGLKVEDVPGVTVNRYCASGLETIGMATAKIQSGMADCIIAGGAESMSFIPMGGYKPTPDYKVAAAGHEDYYWGMGLTAEAVANQYKISREDQDEFAYNSHMKALKAQAEGKFDKQIVPITVDQTFINENGKKETKSYVVKQDEGPRAGTSVAALAGLRPVFAADGSVTAGNSSQMSDGAAFVLIMSEDMVKELNLEPIARLVNFASSGVEPRIMGIGPVKAIPKALKQAGLELKDIDLVELNEAFASQSLAVIRELGLNPDIVNVNGGAIALGHPLGCTGAKLSVQLFDEMKRRGNKYGIVSMCVGTGQGSAGIYEVL
>NZ_CP042170.1|WP_078005493.1|5414683_5415049_+|four-helix-bundle-protein
MRHNFKNLKIWILAMNITNDIYKLTSTFPKAETYSLCSQMNRCSVSMPSNIAEGSNRGNKHFQHYLNISLGSSFELQTQLLIACQNDYLSKEKTEEIENKIIEFQKMTTGFISKLDKNLSS
>NZ_CP042170.1|WP_078005494.1|5415080_5416886_+|acyl-CoA-dehydrogenase
MADTIEKNVTRGGQFLVKETKCEDVFTPEDFSEEQLMMRDSVKEFVDKEIWPNKNRFEKKDYAFTEESMRKAGELGLLGVAVPEEYGGLGMGFVSTMLVCDYISGATGSFSTAFGAHTGIGTMPITLYGTEEQKKKYVPKLATGEWFGAYCLTEPGAGSDANSGKTKAVLSEDGTHYKITGQKMWISNAGFCSVFIVFARIGDDKNITGFIVENDPSNGISMNEEEHKLGIRASSTRQVFFNETKVPVENMLSERGNGFKIAMNALNVGRIKLAAACLDAQRRVTSGAVKYANERIQFNTAISSFGAIRSKLAEMATNAYAGESASYRAAKDIEDRIAAREAEGTSHQEAELKGVEEYAIECSILKVAVSEDVQNCADEGIQIFGGMGFSEDTPMESAWRDARIARIYEGTNEINRMLSVGMLIKKAMKGHVDLLGPAMKVSEELMGIPSFDTPDFSELFAEEKGIIANLKKVFLMVAGSAVQKYGPDLDAHQQLLMAASDILIEIYMAESTILRTEKLAKNQGEDKVQEQIAMAKLYLYKAVDIVNSRGKEGIISFAEGDEQRMMLMGLKRFTKYTNNPNVVALREVITTKLVAENEYCF

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Crispr_ID: NZ_CP042170_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042170_9

5516215-5516326

Orphan

Consensus_repeat	Method
GCAGATTTAATTCGTGTAAATTTGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042170_9

>merge|NZ_CP042170|9|5516215-5516326|CRISPRCasFinder
GCAGATTTAATTCGTGTAAATTTGTGAAATTTGTGGCGAAAAAAAACCTTTTTAATCCTTCTAATTTGTGGCTAACCTTTTTTCTAGCAGATTTAATTCGTGAAAATTTGTG

>NZ_CP042170|9|9|5516215-5516326|CRISPRCasFinder
GCAGATTTAATTCGTGTAAATTTGTG	AAATTTGTGGCGAAAAAAAACCTTTTTAATCCTTCTAATTTGTGGCTAACCTTTTTTCTA
GCAGATTTAATTCGTGAAAATTTGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042170.1\|WP_078005547.1\|5509754_5512259_-\|family-20-glycosylhydrolase	unknown	unknown	gnl\|CDD\|119333
NZ_CP042170.1\|WP_123921758.1\|5501555_5501735_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379879
NZ_CP042170.1\|WP_065450625.1\|5530310_5531138_+\|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl\|CDD\|235467
NZ_CP042170.1\|WP_168199983.1\|5505165_5506953_+\|DUF285-domain-containing-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP042170.1\|WP_078005543.1\|5502677_5503862_+\|fibronectin-type-III-domain-containing-protein	unknown	unknown	gnl\|CDD\|238020
NZ_CP042170.1\|WP_078005548.1\|5512279_5513752_-\|family-10-glycosylhydrolase	unknown	unknown	gnl\|CDD\|224563
NZ_CP042170.1\|WP_078005555.1\|5531252_5532758_+\|sodium:solute-symporter	unknown	unknown	gnl\|CDD\|271361
NZ_CP042170.1\|WP_078005551.1\|5516458_5517283_-\|XynC-protein	unknown	unknown	gnl\|CDD\|223700
NZ_CP042170.1\|WP_078005556.1\|5532840_5535840_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|224389
NZ_CP042170.1\|WP_078006124.1\|5517417_5520333_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP042170.1\|WP_065450620.1\|5520558_5522484_-\|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl\|CDD\|235005
NZ_CP042170.1\|WP_065450621.1\|5522620_5523370_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP042170.1\|WP_078005553.1\|5526928_5528662_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|369630
NZ_CP042170.1\|WP_078005552.1\|5523616_5526904_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
NZ_CP042170.1\|WP_078005545.1\|5507045_5508194_-\|DUF1343-domain-containing-protein	unknown	unknown	gnl\|CDD\|377768
NZ_CP042170.1\|WP_168199982.1\|5504290_5505166_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078005542.1\|5501812_5502673_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078005554.1\|5528917_5530117_+\|DUF1343-domain-containing-protein	unknown	unknown	gnl\|CDD\|377768
NZ_CP042170.1\|WP_078005546.1\|5508445_5509750_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|179620
NZ_CP042170.1\|WP_078005549.1\|5514168_5516004_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|224327

Protein	Function_ID	Function_description	E-value
NZ_CP042170.1\|WP_078005547.1\|5509754_5512259_-\|family-20-glycosylhydrolase	gnl\|CDD\|119333	cd06563, GH20_chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	0
NZ_CP042170.1\|WP_123921758.1\|5501555_5501735_+\|hypothetical-protein	gnl\|CDD\|379879	pfam16778, Phage_tail_APC, Phage tail assembly chaperone protein. Phage_tail_APC is a family of general phage tail assembly chaperone proteins from double-stranded DNA viruses with no RNA stage, many of which are unclassified.	5.63668e-18
NZ_CP042170.1\|WP_065450625.1\|5530310_5531138_+\|N-acetylmuramic-acid-6-phosphate-etherase	gnl\|CDD\|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	6.12302e-152
NZ_CP042170.1\|WP_168199983.1\|5505165_5506953_+\|DUF285-domain-containing-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	1.50728e-45
NZ_CP042170.1\|WP_078005543.1\|5502677_5503862_+\|fibronectin-type-III-domain-containing-protein	gnl\|CDD\|238020	cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.	8.9205e-11
NZ_CP042170.1\|WP_078005548.1\|5512279_5513752_-\|family-10-glycosylhydrolase	gnl\|CDD\|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	1.66257e-67
NZ_CP042170.1\|WP_078005555.1\|5531252_5532758_+\|sodium:solute-symporter	gnl\|CDD\|271361	cd10326, SLC5sbd_NIS-like, Na(+)/iodide (NIS) and Na(+)/multivitamin (SMVT) cotransporters, and related proteins; solute binding domain. NIS (product of the SLC5A5 gene) transports I-, and other anions including ClO4-, SCN-, and Br-. SMVT (product of the SLC5A6 gene) transports biotin, pantothenic acid and lipoate. This subfamily also includes SMCT1 and 2. SMCT1(the product of the SLC5A8 gene) is a high-affinity transporter of various monocarboxylates including lactate and pyruvate, short-chain fatty acids, ketone bodies, nicotinate and its structural analogs, pyroglutamate, benzoate and its derivatives, and iodide. SMCT2 (product of the SLC5A12 gene) is a low-affinity transporter for short-chain fatty acids, lactate, pyruvate, and nicotinate. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	0
NZ_CP042170.1\|WP_078005551.1\|5516458_5517283_-\|XynC-protein	gnl\|CDD\|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	1.50527e-35
NZ_CP042170.1\|WP_078005556.1\|5532840_5535840_+\|serine-hydrolase	gnl\|CDD\|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	1.77227e-83
NZ_CP042170.1\|WP_078006124.1\|5517417_5520333_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.97022e-77
NZ_CP042170.1\|WP_065450620.1\|5520558_5522484_-\|glucosamine-6-phosphate-deaminase	gnl\|CDD\|235005	PRK02122, PRK02122, glucosamine-6-phosphate deaminase-like protein; Validated.	0
NZ_CP042170.1\|WP_065450621.1\|5522620_5523370_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	2.06375e-64
NZ_CP042170.1\|WP_078005553.1\|5526928_5528662_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|369630	pfam07980, SusD_RagB, SusD family. This domain is found in bacterial cell surface proteins such SusD and SusD-like proteins, as as well RagB, outer membrane surface receptor antigen. Bacteroidetes, one of the two dominant bacterial phyla in the human gut, are Gram-negative saccharolytic microorganisms that utilize a diverse array of glycans. Hence, they express starch-utilization system (Sus) for glycan uptake. SusD has 551 amino acids, and is almost entirely alpha-helical, with 22 alpha-helices, eight of which form 4 tetra-trico peptide repeats (TPRs: helix-turn-helix motifs involved in protein-protein interactions). The four TPRs pack together to create a right-handed super-helix. This is predicted to mediate the formation of SusD and SusC porin complex at the cell surface. The interaction between SusC and TPR1/TPR2 region of SusD is predicted to be of functional importance since it allows SusD to be in position for oligosaccharide capture from other Sus lipoproteins and delivery of these glycans to the SusC porin. The non-TPR containing portion of SusD is where starch binding occurs. The binding site is a shallow surface cavity located on top of TPR1. SusD homologs such as SusD-like proteins have a critical role in carbohydrate acquisition. Both SusD and its homologs, contain about 15-20 residues at the N-terminus that might be a flexible linker region, anchoring the protein to the membrane and the glycan-binding domain. Other homologs to SusD have been examined in Porphyromonas gingivalis such as RagB, an immunodominant outer-membrane surface receptor antigen. Structural characterization of RagB shows substantial similarity with Bacteroides thetaiotaomicron SusD (i.e alpha-helices and TPR regions). Based on this structural similarity, functional studies suggest that, RagB binding of glycans occurs at pockets on the molecular surface that are distinct from those of SusD.	1.04315e-31
NZ_CP042170.1\|WP_078005552.1\|5523616_5526904_+\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_CP042170.1\|WP_078005545.1\|5507045_5508194_-\|DUF1343-domain-containing-protein	gnl\|CDD\|377768	pfam07075, DUF1343, Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.	3.76347e-177
NZ_CP042170.1\|WP_078005546.1\|5508445_5509750_-\|serine-hydrolase	gnl\|CDD\|179620	PRK03642, PRK03642, putative periplasmic esterase; Provisional.	2.333e-35
NZ_CP042170.1\|WP_078005554.1\|5528917_5530117_+\|DUF1343-domain-containing-protein	gnl\|CDD\|377768	pfam07075, DUF1343, Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.	0
NZ_CP042170.1\|WP_078005549.1\|5514168_5516004_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|224327	COG1409, Icc, Predicted phosphohydrolases [General function prediction only].	8.51807e-20

>NZ_CP042170.1|WP_078005549.1|5514168_5516004_-|PQQ-binding-like-beta-propeller-repeat-protein
MKYLLSKILLIFIIASGFSQKIEKSGIIKFVQLTDLHVSPGNENDFLLQNIIKEINKSDNEFVVVTGDLTNRGADDELKNVHAILSNLKIPYYVISGNHETNWSESAGLTYKKIWGNDRFVFSKGEYLFIGFPCGPYMKMGDGFVKHEDVLWLDKTLKDSLKNNNKKVLNFAHYPLDNSVSNYKEVLQVLEKYPTVASFCGHGHTLKKYDFSGLSGIMGTSITSRDGKTKSYNEVIISKDSIRIYQKQIDQPGVFKFSVPSTPSKIEIPKDSGTDISPFVKDIASIYSVPSFDKKSLFFANSIGEIQSVNLKNKVLNWKKETGNAIYFSPTLVKNNLIIGTIEGNILGFDTQSGNQKWNILVGGVLVGSPVVENNKLYTASSNAFICIDAVSGKVIWQNKLPESYSQGTPLIHGDKIIFGAWDTNVYCLNKNTGTLIWKWNNGNNKQVLYSAGNVNMAASKNRLYLVTPERFLTIVEIETGKTLLRTSKWKVRESMGKSQDGKWFYAKTMEGELLRLPLNDDLELTEENLVNQSKVLDLKLGYEHNPAGIVENKNKIYTGSRKGEVVVVDAEKFEIIKQINLGSSSVNGFSVDDQGKVWTSLIEGGIYLLE
>NZ_CP042170.1|WP_078005548.1|5512279_5513752_-|family-10-glycosylhydrolase
MKSLKIIFLVVLFQTNIFSQQPAKREMRAAWISTVDNIDWPSKPGLSDKEMKTEMITILDNLRSYNLNTVVFQIRPTADAYYKSTKEPASHWITGTQGVAPGFDPLQLMIDEAGKRGMSVHVWLNPYRVQKDTTNEVLSKNHLFFKKPELFLTYGKTRYFNPGYKETRDFVASVVGEIVRNYNIQAIHMDDYFYPYKIAGQEFPDQAAFAKEPREFKDKDDWRRDNVDLIIKQIRDTIIANKPDVEFGISPFGVWRNIAKDSQGSNTVAGATNYDDLYANILKWQKENWIDYVTPQLYWHIGFDRANFEVLAKWWASHKYGANVYIGHGVYKLSKTAKEVEWRSPDQIVKQIEMIRTMPLIDGSMHFTATNFLKKGDTLRKPLMEKQYKYIALTPEANRVTRIKPQPPVNASIAQKGSTAVLTWKAGVNNQKYVIYRFPKSKITDFSNPENIYYVTTATKLEVPNANLQQYTYAITALSNTQTESSPIQF
>NZ_CP042170.1|WP_078005547.1|5509754_5512259_-|family-20-glycosylhydrolase
MKKSILLIAIFLSSLNTIQAQQLDIIPRPVKIEQKDKAFIIPSSPKIIIDKKIEKSILYIASDFSKITGITASVVNGNKQEKNTIALLVDEKMSLPNDGYQLSVNKKGVLVKGKTPNGVLNGFQTLLQICSAKDVKKGTIPFVKIEDYPRFDWRGMMLDCSRQFFDKQTVENYIDWLAAHKMNVFHWHLTDDNGWRAEIKSMPDLTAKGAWRGPGEVLLPSYGSGNKRYGGFYTQEDMKEVVAYASARGIAVMPEIEIPGHSRAVTAAYPEIGCAITQELKSVQGEVKNVWCVGREENYQILDSIIREVSGIFPFEYIHIAGDEVNRANWEHCPKCQALMAKEGFTDSFQLQNYFFRRVQTIVDKYHKKTNGWNEILKGGEINPNTLISAWQGISYGIESAKKGHETIMMPGQYTYFDMAQSENERGHRWAAITDTKRAYSFEPIPENELTSEQQKLIKGVQGALWSEYLDRPARIMEYQSYPRIAALSEIGWTKKEDKNWDDFYGRLTHSHLQRLANMGIAFRDFPPTAIYKSGTITVTPPYDGAVVRYDAQGNEPTRQSPLYTNPIQTKEYEQYMFRTFFNEDVASPAVKVEKLPVANWNTSKIEVVNISENISENVDKKGIWYLTFEPTTDASANGSIRSVSLFENDQLIQTYAEEKTLKSKPRLRFVIENYNEKNTYRLDFVVDNKEARESSAKVNFNCSPYLEPEVKVTSSMAENPKFPISKLEDYNIETYLRTDVACANGDWILYTFTNPVVSSKIDVLTGIPHHPRFIVNDGHVEYSYNGVDFEKGDSFDYGNASIYPKQPVKAVKIMITATNNEPLMAAQDLRINP
>NZ_CP042170.1|WP_078005546.1|5508445_5509750_-|serine-hydrolase
MKKIGVRIVVVFLIFLGISCQSLKKSNKSFDTKQNEVFIDSMMNNALGKGFFPGAQIIVGSKDSVFILKNYGYHDYSKKELVKTDDVYDLASMSKVLGATLVIMRLVGEDKINVDDKLGETVPFYKNTAIADLTVFELLTHTSGLTPSITFYQSLLSTPDGSPLLSNQQSENYPDLFDTMYVNKNIVYDSNYLSFEPKDQYVQVYKNMWINPEFYKTVYGKIAVANTHERGKYLYSDLNLLLVQQIIETKTGQKLDQLAKGIYSELGISKIGYNPLKWTSEENVMPTEIDNFFRKDTIKGYVHDEAAAILGGVSGNAGLFANAQSISVICQMLLNNGKYHGKQILKSKVVKEFTKSPLVKKGIYRGLGFDKRKPDEFYKKNDFGHTGFTGTFFFMNPENNRFLIILTNRVNPTRTNRLMYKDDFTAKIWRQINK
>NZ_CP042170.1|WP_078005545.1|5507045_5508194_-|DUF1343-domain-containing-protein
MKRLTILCVLISAVSFAQKIKTGAENYTAYLPLLKGKTIGIVTNQTGIIDSKTHLVDFLVQKNIKIKTIFAPEHGFRGTADAGEHVSDEIDSKTGLSITSLYGKNNKPTPEQLKGIDIMVFDLQDVGTRLYTYVSTMHRIMESCAENNIPLIVLDRPNPNIAIVDGPVLDIAFKSGIGMHPTPLLHGMTLGEEAKMINGQKWLKDGIQCNLTVIPCLNYNRSMTYSLPVRPSPNLPNDQSINLYVSLCLFEGTNVSMGRGTEKQFQIYGSPYLPKSDFAFTPKPNFGDKDPLYNGVECNGEDLSAIPRINKLEIKWLIKAYQTTADKSKFFDKRKFSIRAGNEKLQQQIEAGISEQEIRNSWKEGLQEFKKMRKQYLIYRER
>NZ_CP042170.1|WP_168199983.1|5505165_5506953_+|DUF285-domain-containing-protein
MSALLQNTVFGRNKLTYKPFISTWKTDNITTGSSANNQIRLPLMPNGSYDFNIDWGDGTSSVITNYASAIHTYSVPGTYTITILGKCKGWSFYINSGERLKILSIQKWGSIQLGILNSIYGCFYSCKNLTLTTVEDTLQTTGFTSFYLMFYDCASLTTINKLNDWDVSKIVNLSNMFSNSPSFNEYIGGWNTSSCVGMSGMFINTLFNQDIGNWDTSKVSDMSYLFMTAKAFNQDISKWNTSNVTDTTSMFSGAVAFNRPIENWDVSKSKNMSYMFYGVTAFNHSINRWNTSSCINMFNMFGNATSFNQNIGEWDTSKVNNMSNMFNGAAAFNQDINRWNTSSVTTMAAMFSNASSFNKPIENWNTGNVTSFTSMFQNAIAFNQDIGNWNVSKGGTFNLMFGNAQSFNNGGSNSINDWNFKTTGEINMAQLFGGAKVFNQPVGSWNVTRANWMNSMFQGAVSFNQDISSWDVSNVTLFQDMFSIATEFNQNIGSWNVSNAQNMNSMFSGATAFDQNIGNWNISNVINFVNFMQHKTALTFSRANLDAIYNGWSTRPVKPSIRITFNGAKPTSASSVGKAILASSPNNWIIQDGGI
>NZ_CP042170.1|WP_168199982.1|5504290_5505166_+|hypothetical-protein
MNTNHNRIKVSDLETDEPGKILVTNEKGELEFSETMPGKQDLQSVLEAGNYATKNMWIGNGDEGMQIFVGAESEDAVQLGSGGMAGLSRKSTFIGKNAGNGTIQEMVTALGYYAGAGNQYPRAIILGAAGATVYTTAPNQLAIGTNDSYKTIRFNTDVQTDLDLNFPSTSGTLVTSNNFKTINGESILGTGNIDLSKQDITTQIEVSTSQSIPSDWYGKTVLFTTSCTITVPSSILESFIFNGITLSGVNVTWAITAPHTWLFGTPSVTSEKQIFTFTKRGNTNGILLLGV
>NZ_CP042170.1|WP_078005543.1|5502677_5503862_+|fibronectin-type-III-domain-containing-protein
MENTGYKSFAFLEKYYTDDNTSTEETKPNVTSDPDYIAPILDITTCPPVTRHYNSQQTKTVTKNNCSPGETGTEVGLIAYANQFVSYDSITDANNQALAWLENNAQIYANNAGTCIADSTPPTSPFLSVSSITPNSLILSWTPSTDNGILAGYDIYQNGILLTSTSSDVLHYPITGLSAASTYTFYVKAKDAKGNSSNSNILTSTTLPSILSLAAVRSVIFEKRSRSWGTCRNALASDLEYNDNTFIGAAVSADNLLYYLNRYRGVIDTSSITIKPKSAKIKFKFAENTVGNALTFNLFGSNIQIPLNQEFQPADWNDWDNTTFINSISVPSNSTAYNEINLTSSQLDLLVSGQAYNFFLISNGDKESYEPSSNSRPVLSISAATGQIYLECQF
>NZ_CP042170.1|WP_078005542.1|5501812_5502673_+|hypothetical-protein
MEENTTYKPFAYGDHHTPVEGLEVYYNNEKTLTVKKNDCLKGTTGNPVTLTAGANKFVSTISTAEADEQAESWLKANTQAYANNIGTCSIRPTAWRGANPSCVLEPPTTLLPFDYMVIKYKWAPGAGVDLDTFTGFINTGFSALDKKWVGFGLGNEIPASAIAQDSYIMWGGDIQDRTGTETCLVNFKKVKEVYSNLNDVQIRMAGVWWSSKASGNIDVEITTFLGGTMLKEGKDIINNDGNQVQQLNFSKNILVQGTHLAIDQVTHIGYINYSNNQSTAKVVINY
>NZ_CP042170.1|WP_123921758.1|5501555_5501735_+|hypothetical-protein
MESLRAIRNSLLTETDWTQVEDSPLSPEKKAEWKNYRQALRDLTDVDDLTTIVWPVKPL
>NZ_CP042170.1|WP_078005551.1|5516458_5517283_-|XynC-protein
MKKAICTLFLMFVFFSAKAAKTDTIQVFSPSMNKSIKTCVITPDDYKKSNKKFPVVYLLHGYSGNYGSWAKDFKDLARQVDQYGFIVIGVDGNFSSWYFDSPIDPTFKYETYVIKELVPFVDKNYKTIASREGRAISGLSMGGHGALYLSFRHKDVFGAAGSMSGGVDIRPFPENWDIKKRLGTLTEFPENWEKNTVTNMLELVKDNKLKMIIDCGVDDFFMDVNRELHNNMLTLKINHDYIERPGKHNIEYWENSLKFQLLFFDNFFKENKLK
>NZ_CP042170.1|WP_078006124.1|5517417_5520333_-|FAD-binding-oxidoreductase
MSSLLPLQQLSDSLEGTLFYDELYKKLYATDASAYRIMPEAVAIPKSVEDIAKIIRFAAKNNISITPRTAGTSLAGQTVGNGIIVDVSKHFTKIVAFDAEKKTITVQPGVIRDELNLYLKPHGLFFSPTTSTTNRCMIGGMVGNNSSGTTSIRYGVTRDKIVEIKAVLSDGSLAVFKDLTSEEFIEKTKGDSLESKIYKTIYEELSNKENQEEINKEFPKPEIHRRNTGYAIDALLKSALFSGTENTINLGKLLCGSEGTLAFTTEITLKVDDLPPTNNIMVVAHFHTIQESLEAVVVAMKHHLYTCEMMDDTILDCTKTNREQSKNRFFIVGEPKAVIMLEVGSHISMEDAELQADALIKDLEANNFGYALPKIYGTDIDKVNEVRKAGLGLLGSIVGDDKAADSIEDTAVELSDLPNYIADFAAMMERHGQSAIYYAHAGAGELHLRPKINLKTKEGLHQFRNISTEVAHLVKKYKGSLSGEHGDGILRGEFLPFMIGDKNYELLKRIKKAFDPDTILNVGKIVNASKMDENLRFEAGRIEPEIKTIQDFSDSMGILRAAEKCNGSGDCRKLPSAGGTLCPSYRATRNEKDTTRARANALREYLTHSEKDNKFDHEELYKVFELCVSCKACASECPSNVDVATLKSEFLYQYQKANGFSVRNKIFAFNSKLNKLGSIAPSMTNFVANLPLVKKSMGIAPKRQVPLLAPTTFRKWYEKNKKSVANNAFENGKVYLFCDEFTNYYDVSVGIDAYELLTKIGYEVLIIDHEESGRAFISKGFLEEAQDIANKNVAIFKDLIDENTPLIGIEPSAILTFRDEYIRLAYDKEGAEKLSKNTFTIEEFFKREITNGKIHSGQFSDTEKTIKIHGHCHQKSLSTIEASFAMLNLPKNSSVTIYNSGCCGMAGSFGYEKEHYEISMQMGEDTLFPKIRTTEATTAIAAAGTSCRHQIFDGTNRKAMHPVTILRDCLR
>NZ_CP042170.1|WP_065450620.1|5520558_5522484_-|glucosamine-6-phosphate-deaminase
MKTNTSLAYDIPGKFEETRFEKNHNVIFENSVQGSKMVAQEIAELIRSKQANNESCVLGLATGSSPIKVYEELVRMHKEDGLSFYNVISFNLDEYYPMTKENRQSYHYFMHQYLFNHIDIKPENINIPDGTVAIEELNQYCVDYELKIKEAGGLDFQLLGIGRTGHVGFNEPGSHINSGTRIITLDHITRVDASSDFNGIDNVPKRAITMGVSTILRSKRIVLMAWGQNKASIIKRTIQGEITSDVPATFLQNHANATFVLDQFSASELTRFETPWLVGGCTWTQELKSKAIVWLCRETKQSILKLTDRDYNNNGMSDLLAQEGSAYDLNINMFNVLQHTITGWPGGKPNTDDSHRPERANPAKKRVILFSPHPDDDVISMGGTFSKLIKQGHDVHVVYQTSGNIAVTDDEALKFAEVAKDFLGDAESQINFKSVIDFLNSKSENQIDSLEVRKLKGLIRRRESYAATRYIGLKDENTHFLDLPFYETGQVKKNPLGPEDIAIVKDIIAKIKPHQVFAAGDLADPHGTHEVCLNAIFAAMKELKPEKYMDDCWLWLYRGAWHEWDIHEIDMAVPLSPSEVLLKRSAILYHQSQKDRVMFQGNDSREFWVRAEDRNKNTAILYDDLGLAEYEAIEAFKRFDY
>NZ_CP042170.1|WP_065450621.1|5522620_5523370_-|DeoR/GlpR-transcriptional-regulator
MLKAERHQYIMTKLIEEQKVVTTDLALALDLSEDTIRRDLNELDSKKLLEKVYGGAVQVSEKSVDVFNINIAAEEEKKRIVTKALSLLHDGQVIIMSGGSTNLVFAKLIPSDLKATIYTYSLPIAMQLSQHPNIDLIFIGGKMQKNAMVTIGMDVIQVVSKIKADICFIGASSINIKQGLTEIGYEISIVKKAMIEASDRVVSMFSSDKLNTKMPHVVCDLNLLDTIVTELNPEDARLEEYKKSGVFIL
>NZ_CP042170.1|WP_078005552.1|5523616_5526904_+|TonB-dependent-receptor
MKKLFLISLLVLFIQVTFGQTKTITGTVKNKADGFPIPGVSILIQGTKNGTTTDFDGNYSIPASPGQSLVFSYMGSETQVVKIEGQQKINISLAETTSKLDEVVIVGFSSQKKTNLTGAVASIDVAKTIGSRPLTDVSKALQGTTPGVNVSFNSGNINRTANINIRGAGTINGSDAPLILVDGVPTDLSLINPNDIATMTVLKDAASASIYGARAAFGVVLITTKGGKTGEGKVRFSYSANTAFVNPISTLKFLDPTEEIPGLIAAGTRTDGAVPEIFGANYNTLLAGIKNWKEKYANNRTSHEMVYGEDWEIKNGTPYFYRVWDANKELYANNALQTTHNLSAQGNLGDKSSFFASFALTNQEGMLRVNQEQRQRTNINLGFTTKLADWLTGDFKVMTINSTYDQPFNYYGGSGTDDTSYGGYFGYALRWGQYFPNFGTYRGYNFRTAGGYIANASRNENIQRNNRLSAKFTADITKDFNVIAEVSSVTNFYNRKQNGGKFLAWDSWSAMPYDATTIQTAIPATLEAGNDYVAQSKSESVTNVVNIYANYKKQINKHSFKVLGGFNSEWQDFSRNYARRNTLLDKSKPEFNLAVGEQFVSGSANTSLNPAETTYSIAGFFGRINYDYNGIYLLELNARYDGSSKFPTNEQWGFFPSASVGYKIVNEKFMESTRGWLNDLKIRGSIGAIGNQNVGNNAFLSILNSANPSWVNSGSTLPPSTGLPTNVDPSLTWEKVYTKDLGIDIKIFDMLGASFDWYQRDTKGMLAPGITLPGSFGQNAAQTNSGNMRTRGWELSLNFNKNLSENASVFVDVALSDYQSVITKWNNTSKLLGLVTPTTYPYYDGYEIGQIWGLTSDRLLQADDVITNNGKTVNGVDYSKTMVGNFKYGAGDVHYVDLDGDGAITRGAGTADDHGDLKKIGNTTPRYKYGITLGGKYRGFDISGFFQGVGKRDYWAASDAVLPFYRAPQQMYANQADYWTPENTQAYWPNPYYGNEANTLGAGTSGSNNFVSSTRYLLDMSYFRLKNVTLGYSLPKDLVKRAFLEKVRIYASGENLVTWADKRLPVDPEIDETEVFWGRAYPYTKTISFGVELAF
>NZ_CP042170.1|WP_078005553.1|5526928_5528662_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKKSIIKSRFLLMLAAATVAMSAVSCSDYLTDDPADKFTNENFWQSEDNVKTFSWLNYDTFYGYGNGTTIGLSFFYYHGSDYKVDDNLSAFTFYQMPVTAATTNVYSWNEYYTLIRRCNLMLEKIPTVSMSAEKKNHYIGVAKFFRAYTYFRLVQKMGDVPYTDKYLIQGDPAVYAPATPRGEVMDKVIAELEEAANLMLVSDDKNATVNKYTAYAALSNACLYEGTYRKYHLGQDGSAYLNKAKVASLAVMNNPAYKLNADWKSLYNSVELLGNTEVILAKRYLTNVLMHSLQNYTNTSTIQYGLTKWAADSYVTTNGLPIQQAGNAQYTGDDNVTKTFANRDPRFGKTVNPANYGYKGKPFGTTALVSMSGYVFELYNNPATTGPDVTTGGRNYTDAPIFTLSEVYLNYAEACAELGTATNNDLDISINKVRARAGIAALTTDGNNASAGNVAINDPRRTSALEQISGVVSPLIWEVRRERQIEFMSWTTLRQADIYRWKKGDYLDTSKNPDVNLGARIGTPVGSQTVVDGNGYVKIYPASTRTFEPKHYLMNIPTNDIDLYKAQGVTLKQNPGW
>NZ_CP042170.1|WP_078005554.1|5528917_5530117_+|DUF1343-domain-containing-protein
MIKFIAKSVFIVTSIIYTPSYSNSFQKAAKNNPHEITASFIKTGADNYEKYLPLLKDKKVGIVTNQTGILSDKTHVVDFLLEKKIAVQTIFAPEHGFRGTADAGEHVVDGKDPKTGLPIISLYGDNKKPKAAQLAGIDVMIFDLQDVGARFYTYISSLHYVMEACAENGIPLIVLDRPNPNGGIIDGPLLEKEFTSFVGMHPIPLLHGLTIGEYSKMINGEKWLKNEVQCKLTVIPCVDYKRDMPYSLLAKPSPNLPNDQSINLYASLCLFEGTNVSMGRGTEKQFQIYGSPFLKKTNFTFTPKPNFGAKDPLYNGKECFGEDLTSYPKLTKLELKWLIKAYQNTSDKTKFFNPFFTKLAGTKKLQQQIESGVSENEIRKSWQKDLEAFKKMRKAYLIY
>NZ_CP042170.1|WP_065450625.1|5530310_5531138_+|N-acetylmuramic-acid-6-phosphate-etherase
MKNKNPETEQESLYKDLDQMSVKELLTNINTEDKKVPHIIEEQIPKIEKLVKAIVKKMQLGGRLFYIGAGTSGRIGILDASECPPTFGVPHDMIIGIIAGGDTAIRKAVENAEDDTEQAWKDLAKFEISSLDFIIGIAASGNTPYVLGALKKAKEHNIKTGSISCISNGLIAQEADYPIELIVGPEFLTGSTRMKAGTAQKLTLNMISTSVMIKLGKVKGNKMVDMQLSNEKLVKRGIKMIMEELGIEYDLAEELLQKHKSVRAVLLSQSKNQEN
>NZ_CP042170.1|WP_078005555.1|5531252_5532758_+|sodium:solute-symporter
MTPSTILLLIIIYFGTLFYISHRVSRKDGGNDAFFTANKNSKWYLVAFGMIGTALSGVTFISVPGEVGAPSGEQFKYFQFVLGNAIGFIVITKLLLPLYYRMNLTSIYGYIEQRMGFYSYKTAASIFLISRTVSSAFRLYLVVIVLQRFVFDFYHIPFAVTVLISLLLIFSYTYRGGLKTIIITDTLQTFFLVTSVFLTIYFICDRMDLSAISAFEEVKNSNYSKIFFFDDFLGSKFHFVKQILGGMFVTIAMTGLDQDLMQKNLSCKNIGEAQKNMFTFTGIFVVINIFFLSVGALLYIYANKNGIAIPTDLVTGKPRTDLLFPEIALNHLATIPAIVFLLGIIAATFATTDSALTALTTSFCVDFLGMDKAENSKKNTVRTRHLVHISFSALIFFVILIFNSINDSSVVGMIFKVASYTYGPLLGLYAFGLFQKSKHVKDKFVPVICLLSPFFTYLINENSAMLFSGYVFDNELIVLNGLITYLGLYLTSSRSTEKISF
>NZ_CP042170.1|WP_078005556.1|5532840_5535840_+|serine-hydrolase
MKDYIIKISLCASFLFLITNCGVSKKNTTIKDLKTDPVTTDTVVYTAPKTSEKKTFFKDSDKETAWVDSIYNKMSLREKVGQLFMISAYSNKDSVHVNEVNKLVQDYKVGGVIFFQGGPVRQAKLTNLYQSKAKVPLFVGIDAEWGLAMRLDSTYRYPWNMTLGAIQDLNLIEKVGRNMANENKRIGIHFNFAPVLDINTNPKNPIIGNRSFGEDKVNVSEKAIALMKGVQSQGVFSTGKHFPGHGDTATDSHHALPLVTFSKERLEQIELYPYKRIFDEGLVSVMVGHLNIPSLETTPNMPSSASYNVVTNLLQKELGFEGLIFTDGLAMKGASNFKGPGDLEIAVILAGNDVLLCPENVPVAVQKLEAAYNENVITEERLAHSVKKILHYKFKAGLNHYKPIDMANIYTDLNPSQNDALHYQLYENAITVLKNEKEILPIKELDQKIAYVKLGDDTNSTFVSTLKKYTEIIEVKDTNLDSLNKELRKFDKVIISFHKVNKPWEKQEFTLTEMLWLKEIAKHNDVILDIFAKPYSLLSISDFDDIEGLVVSYQNSDISQVVSAELLFGAISAKGKLPVSINTSFKVNDGLTTEKLNRLAFTAPENVNMNPAILSKIDAVAQKAIDGKMAPGMQVLVARKGSVIFQKSYGNQTYENGKKVTNTDLYDVASISKMISTLPNVMQLYDKEKVNLDTKLKDMVPFFAKTNKENIIFKDLLTHYAGLQAWIPFYKATLDSNNNPSEKYYRKIAETGFTTKVADNLYIRNDYHDTIMKIIADSPVSLKKEYKYSDFTFIILKEYLERKTHKKLEDLSKQNFYSTLGMNNTLYNPLDKFDKSNIAPTEVDTYFRHQVIQGYVHDMAAAMEGGIAGHAGIFSNAMDVAKMMQMYLQKGNYGNKEYFSPQTFDAFNTCYYANQGVQRGLGFDKRIGKDGPTCACVSPSSFGHTGFTGKIAWVDPETEIVYVFLSNRTYPGTNGDENKLAKGKIREEIQQIIQEAIIK

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Crispr_ID: NZ_CP042170_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042170_10

5747018-5747119

Orphan

Consensus_repeat	Method
GGAGATTCCTCGTTCCTCGGAAGGACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042170_10

>merge|NZ_CP042170|10|5747018-5747119|CRISPRCasFinder
GGAGATTCCTCGTTCCTCGGAAGGACAAACGTTGTGGCAACTTTATGAAAAACAAAACTATGTCGAGTTTCTTGTGGAGATTCCTCGTTCCTCGAAAGGACA

>NZ_CP042170|10|10|5747018-5747119|CRISPRCasFinder
GGAGATTCCTCGTTCCTCGGAAGGACA	AACGTTGTGGCAACTTTATGAAAAACAAAACTATGTCGAGTTTCTTGT
GGAGATTCCTCGTTCCTCGAAAGGACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042170.1\|WP_065451312.1\|5759740_5760160_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|184734
NZ_CP042170.1\|WP_065451311.1\|5760258_5760729_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078005680.1\|5742433_5744011_-\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|225536
NZ_CP042170.1\|WP_078005689.1\|5758251_5759523_+\|DUF5009-domain-containing-protein	unknown	unknown	gnl\|CDD\|226749
NZ_CP042170.1\|WP_078005681.1\|5744751_5746014_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP042170.1\|WP_078005685.1\|5748388_5750611_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|214792
NZ_CP042170.1\|WP_078005687.1\|5754888_5756166_-\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP042170.1\|WP_065451322.1\|5744172_5744589_-\|DUF1573-domain-containing-protein	unknown	unknown	gnl\|CDD\|377880
NZ_CP042170.1\|WP_078005678.1\|5740501_5741596_-\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238869
NZ_CP042170.1\|WP_065451310.1\|5760758_5761055_-\|DUF721-domain-containing-protein	unknown	unknown	gnl\|CDD\|377496
NZ_CP042170.1\|WP_078005686.1\|5750735_5754791_+\|T9SS-type-B-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275004
NZ_CP042170.1\|WP_078005676.1\|5736625_5738917_-\|beta-glucosidase-BglX	unknown	unknown	gnl\|CDD\|185053
NZ_CP042170.1\|WP_078005684.1\|5747621_5748386_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225130
NZ_CP042170.1\|WP_078005675.1\|5736015_5736543_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042170.1\|WP_078005682.1\|5746010_5746694_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP042170.1\|WP_078005683.1\|5747219_5747525_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198395
NZ_CP042170.1\|WP_078005679.1\|5741814_5742324_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|223862
NZ_CP042170.1\|WP_078005674.1\|5735634_5735844_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|377269
NZ_CP042170.1\|WP_078005677.1\|5739129_5740512_-\|sialate-O-acetylesterase	unknown	unknown	gnl\|CDD\|377084
NZ_CP042170.1\|WP_078005688.1\|5756435_5758025_+\|bacillithiol-biosynthesis-cysteine-adding-enzyme-BshC	unknown	unknown	gnl\|CDD\|378380

Protein	Function_ID	Function_description	E-value
NZ_CP042170.1\|WP_065451312.1\|5759740_5760160_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|184734	PRK14545, PRK14545, nucleoside diphosphate kinase; Provisional.	4.10415e-91
NZ_CP042170.1\|WP_078005680.1\|5742433_5744011_-\|L,D-transpeptidase-family-protein	gnl\|CDD\|225536	COG2989, COG2989, Uncharacterized protein conserved in bacteria [Function unknown].	1.67905e-97
NZ_CP042170.1\|WP_078005689.1\|5758251_5759523_+\|DUF5009-domain-containing-protein	gnl\|CDD\|226749	COG4299, COG4299, Uncharacterized protein conserved in bacteria [Function unknown].	1.30036e-64
NZ_CP042170.1\|WP_078005681.1\|5744751_5746014_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.88837e-42
NZ_CP042170.1\|WP_078005685.1\|5748388_5750611_-\|radical-SAM-protein	gnl\|CDD\|214792	smart00729, Elp3, Elongator protein 3, MiaB family, Radical SAM. This superfamily contains MoaA, NifB, PqqE, coproporphyrinogen III oxidase, biotin synthase and MiaB families, and includes a representative in the eukaryotic elongator subunit, Elp-3. Some members of the family are methyltransferases.	7.6515e-17
NZ_CP042170.1\|WP_078005687.1\|5754888_5756166_-\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.21239e-165
NZ_CP042170.1\|WP_065451322.1\|5744172_5744589_-\|DUF1573-domain-containing-protein	gnl\|CDD\|377880	pfam07610, DUF1573, Protein of unknown function (DUF1573). These hypothetical proteins, from bacteria such as Rhodopirellula baltica, Bacteroides thetaiotaomicron, and Porphyromonas gingivalis, share a region of conserved sequence towards their N-termini.	4.31869e-38
NZ_CP042170.1\|WP_078005678.1\|5740501_5741596_-\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238869	cd01831, Endoglucanase_E_like, Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.	9.06211e-42
NZ_CP042170.1\|WP_078005686.1\|5750735_5754791_+\|T9SS-type-B-sorting-domain-containing-protein	gnl\|CDD\|275004	TIGR04131, conserved_hypothetical_protein, gliding motility-associated C-terminal domain. This model describes a protein homology domain unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Flavobacterium johnsoniae, that exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss a this motility. Proteins with this domain frequently pair with members of family TIGR03519, whether one such pair or many occur in a genome. More than 30 members may occur in one genome.	1.56603e-35
NZ_CP042170.1\|WP_078005676.1\|5736625_5738917_-\|beta-glucosidase-BglX	gnl\|CDD\|185053	PRK15098, PRK15098, beta-glucosidase BglX.	0
NZ_CP042170.1\|WP_078005684.1\|5747621_5748386_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225130	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only].	3.57728e-14
NZ_CP042170.1\|WP_065451310.1\|5760758_5761055_-\|DUF721-domain-containing-protein	gnl\|CDD\|377496	pfam05258, DUF721, Protein of unknown function (DUF721). This family contains several actinomycete proteins of unknown function.	3.9574e-15
NZ_CP042170.1\|WP_078005682.1\|5746010_5746694_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.96181e-64
NZ_CP042170.1\|WP_078005683.1\|5747219_5747525_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198395	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria. The family includes a group of uncharacterized bacterial proteins with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	3.63598e-34
NZ_CP042170.1\|WP_078005679.1\|5741814_5742324_+\|C40-family-peptidase	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	1.06994e-22
NZ_CP042170.1\|WP_078005674.1\|5735634_5735844_+\|DUF433-domain-containing-protein	gnl\|CDD\|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	7.42707e-23
NZ_CP042170.1\|WP_078005677.1\|5739129_5740512_-\|sialate-O-acetylesterase	gnl\|CDD\|377084	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase. The catalytic triad of this esterase enzyme comprises residues Ser127, His403 and Asp391 in UniProtKB:P70665.	1.67896e-17
NZ_CP042170.1\|WP_078005688.1\|5756435_5758025_+\|bacillithiol-biosynthesis-cysteine-adding-enzyme-BshC	gnl\|CDD\|378380	pfam10079, BshC, Bacillithiol biosynthesis BshC. Members of this protein family include BshC, which is an enzyme required for bacillithiol biosynthesis and described as a cysteine-adding enzyme.	0

>NZ_CP042170.1|WP_078005682.1|5746010_5746694_+|response-regulator-transcription-factor
MKQFKILYTEDDETLAFLTKDNLEQNNYEVIHCCDGQLGLETFKKENFDICIFDIMMPKMDGFELATEIRKLNTDIPIIFLSAKTLKEDRIKGLRLGADDYLVKPFSIEELLLKIEIFLKRSQKNIPIEKSVYEIGKYQFDTNNFILFNESEKISLTQREAELLKLFLDNKNSVLKREQILTSLWGTDDYFMGRSLDVFISRLRKILVNEEGISIENLHGIGFRFTV
>NZ_CP042170.1|WP_078005681.1|5744751_5746014_+|HAMP-domain-containing-histidine-kinase
MKINKLNSIILLGLVAIISILVAQLLWTKEAFTLEQKKLSQKANIALLEVARKLYEGKDHESSCLNPVQKISNDYYIVNIQNDFEPDILEFYLRSEFKKMNITTDFEYAVYNCQSDEMVYGKYISFAEKEKTKKTVSFPKHKNLVYYFAIRFPNETTYLFSSMRFWFILSIALILILLIYVYSIFTLLQQKKYSELQRDFINNMTHEFKTPLSSILIASKYLSEQNPIKDDKKLHTYTNIIINQSHKLNNHIEKILNVAKSDYAPLELKKETVLIVPIIEETIENIQLKYPEASIKIETLSTEYQIETDVFHFSNLVYNLLDNAIKYCNEKPEITIEISAENSVIKIAFSDNGIGISPKNMSFVFDKFYRAQNEKSNEVNGFGLGLYYVKEICNLHNWKIKVQNNPTNGITITLSIPYKK
>NZ_CP042170.1|WP_065451322.1|5744172_5744589_-|DUF1573-domain-containing-protein
MKMIKISMLALALSLMSFSAIAPIQSLTSETKVEAATASTIVWKAETIDVGQIPQGTPKAIVYEFKNTGKTAVVITNVQGSCGCTATDYTKEPILPGKSAKVTATYNAANKGGFTKTVTVTTSAETTPKVLTLKGTVI
>NZ_CP042170.1|WP_078005680.1|5742433_5744011_-|L,D-transpeptidase-family-protein
MKILYPLVAVVLLISAVSCNKKADKNTEESKTSEKVVPELKITIDSSGISTFYQAYPKLIKFQSEVQALYKKNKSTQLWLDNKGVVEYANTLFNKYKGLDQEGLKANFPYNEKINPIFEHTADNKLSKADTDLMITNLYFYYVQKVSGVDEKTTRSLEWLLPRKKVNYQVFSDSIYKKATISDDKKSKMFSQYYKLRDALHRYREIEKKGGWKTIETEEGVKSLKLGDSVATIGQIRERLFITGDLKENSKSNICDSTLIKGIRSYELHHGLTPKNTILPEHIAELNIPVSDRIKTIIANMERCRWIDPELEKGKEYIEVNIPEFRLYLIRNHEIAFVSPVVVGRAMTKTVVFSGMMNNIVFSPYWNVPTSIIKSEIKPGMARNKNYLAQKNLEWNNGAVRQLPGKNNSLGLVKFLFPNSNNIYLHDTPSKSLFERESRAFSHGCVRVGKPRELAIEILKQDPSWTTERIDKAMHAGKENWVSLKKKIPVYIGYFTAWVDRDGNLNFYKDVYKRDESLIKLLTEE
>NZ_CP042170.1|WP_078005679.1|5741814_5742324_+|C40-family-peptidase
MKLTLYIAFASMILCSSFTLPKEKKPVSYPTEKILTAIDRDSIITYAKQYLGIHYLYAGNDPKKGFDCSGFVNYVFKHFDVSVPRSSSGYKNLGVSKKPEDFKVGDVLVFYGYKNRTIVGHVGIICEANGMSSKFIHASSGKAGSVTISDLDSDHYSKRYYKCVDVLPK
>NZ_CP042170.1|WP_078005678.1|5740501_5741596_-|SGNH/GDSL-hydrolase-family-protein
MFLKKIMFLISFLLISIVSTSQNKTNTFLYQGRVEKLSDNKVVLIGTASSVSFNFSGNECSISLQSVDAWEHHNYVSLVLDGKYIGKLRIEKGAPQSFPIKTTVNKKEHTLEIYKTTEAHSGGILFAGTTAKLTSISAKKKKKIEFIGDSITCGAASDPSDVPCDKGEYFDHHNGYYAYGPVLSRAIGVDYLMSSVSGIGMYRNWNDENKEEGIMPDVYQNLYLTKDNSKPQYDFAFQPDIISIALGTNDFSGGDGKKERLPFNAEKYVSNYINFIKMLYKHNPKAQIVITNSPMINGQNAIVFEDCLNKVKAAFAEDKTHKPILIFKFKPMTPKGCSGHPDVADHKVLAQEYAPFLKKLLNEK
>NZ_CP042170.1|WP_078005677.1|5739129_5740512_-|sialate-O-acetylesterase
MKNNIFKFVFILMISSTMMANVTLPNIFGDNMVLQRNSEVKIWGWANPKEEIKLVSSWNNQEYKVTANNQAQWELHIKTPEAGGPFTISIKGYNEVVLKNILIGEVWLCTGQSNMEMSASWGIDNGDEEAKNATNPNIRFFTVPKLTATSPQNNLLGNWAESTPETMKNFSAIGYFFAKRLREDLKNVPIGLISSNWGGTPAEIWMPEEVVQNDPILLENAKKLNEQEYGPRQPGRAYNAMIYPFTGFKIAGTLWYQGESNVGSLVYDKTLSALITSWRKAWQDEFPFYFVQIAPYKTGSNNFSNVTVRNSQRKILKEVPKTGMVLTSDISDTIDIHPKNKKDVGIRLANLALAEMYKTNNNIVNGPLFKDFKVEKNKAIISFDYADGLYFKNKTSKQFELAGADGIFFPAEASIKNNQVILSSKKVSNPAKVRFAWGNTIQSDLFNKANLPASCFTDEF
>NZ_CP042170.1|WP_078005676.1|5736625_5738917_-|beta-glucosidase-BglX
MKNKIITIGVFTLFTVGNMNAQKKPYLDKNKTVEQRIDLLLPLMTLEEKVGQMNQYNGFWDVTGPAPKGGSAELKYEHLRKGWVGSMLTVRGVKEVKAVQKIAVEETRLGIPLIIGFDVIHGYKTLSPIPLAEAASWDLEAIKKSAAIAADEASASGINWTFGPNVDVANDARWGRVMEGAGEDPYLGSKIAIARVHGFQGETIADLSKVNTIAACAKHFAAYGYVEAGLEYNIVDISNSKLYNSVLPPFEATVQAGVRTFMNSFNTLNGVPATGNVFLQRDILKGKWKFDGFVISDYASIREMIAHGYAKDEADATAKAVIAGSDMDMESYLYVAKLVALVKEGKVKESLVDDAVRRILRVKFELGLFDDPYRYCDEKREKAVVGSKANNEGVLDMAKKSIVLLKNDKNLLPLKKTGQKIALIGALANDKNSPLGSWRIAADDNTAVSVLEGMQQYKDNQLVFEKGVDLLSQKATFLTETVFNTTDKSSFEAAKTAAKNADVVVIVLGEYGFQSGEGRSRTDLNLPGLQQELLEEIYKVNRNIVLVLNNGRPLSIPWAAENIPTIVEAWQLGTQTGNAVAQVLYGDYNPSGKLPMSFPRNVGQVPIYYNKYSTGRPIDSDKNVFWSHYMDVEKTPQFPFGFGLSYTKFDYKNLKINKTAFAKGESVQVSVAVTNSGNYDGKEVVQLYIHDEFASIVRPIKELKGFELVNLKKGETKTVTFTLTEKELGFYDNDGNYLVEPGTFKIMVGGSSDKGLESGFEIK
>NZ_CP042170.1|WP_078005675.1|5736015_5736543_-|hypothetical-protein
MLNLHDFKTESLKLIYEDAKNRFDDITKASDTIDTKANTLFNLLILIVITTLGFLVNKYPCINYKDLIVQDAIALCIVSVVSLIWVSTILFPSKIRLKGTKPNFHIESPNFNRNWTDDQTSLYVLYDCVNTIQISIKENEEIHSKRVKNFKWACFIIAYSMPIILIWSIVAIARS
>NZ_CP042170.1|WP_078005674.1|5735634_5735844_+|DUF433-domain-containing-protein
MENNWQNLISINPDIRFGKPVITGTRICVSDILSWLSTGMSFEEIIEDFPELKKEHILAISNINKSSIS
>NZ_CP042170.1|WP_078005683.1|5747219_5747525_-|GIY-YIG-nuclease-family-protein
MHLEVGFHTYYISIITNKAKSVFYTGVTNDLRSRLLQHKNNIVSKNKTFASKYNVEFLLYYEKFTWIQEAIAREKEIKGWRREKKLALIKIINPELKFLDY
>NZ_CP042170.1|WP_078005684.1|5747621_5748386_+|MBL-fold-metallo-hydrolase
MKLHHLRNATLVIETETDVILVDPMLGKRKTIPPFTIFRYKPHRNPLVALPKNTRDILSRVTICLITHLHPDHIDKAGEVFLRRKSIPVICSAKDENALSARGLNILQTLNYWEPQEFLGGKIIGIPAIHGYGFIAKLMGNVMGFYIELPNEKSIYISSDTIFTEHVQKVLIEFKPEIAVVACGTARLDIGQPLLMRMNDILKFVALAPKYILANHLEALNHCPTKRAELRLALEQNDLLDKVSIPEDGEIVSY
>NZ_CP042170.1|WP_078005685.1|5748388_5750611_-|radical-SAM-protein
MKTKLFVVTPPFTQLNTPYPATAYIKGFLNTKNIESVQADLGIDVILELFSKKGLIDLFQVSGFKFESVSSRAESRDDVSDNSKRIFALQDEYIKTIDAVIQFLQGKNPTLALQICQEDFLPEASRFAQLEELDWAFGTMGTQDKAKHLATLYLEDISDYIVECVDENFGFSRYAERLGRSANSFDELYEALQQEPTYIDAILISILKSKIETIQPTFFLISVPFPGNLYSAFRCAQWIKQNHPEIKISMGGGFPNTELRSLSDARVFEFFDFITLDDGEVPIEELIFNLENPNSNSYKRTFLLEDGKVVYKNNSLKHDYKQAYVGTPDYSDLPLDKYISVIEIVNPMHRMWSDGRWNKLTMAHGCYWGKCTFCDISLDYIKVYEPVAANLLCDRMEDMMLQTGQNGFHFVDEAAPPALMRALALEILRRKLAVTWWTNIRFEKSFSKDLCLLLKASGCIAVSGGLEVASDRLLKLIDKGVTVEQVAKVTRNFTEAGIMVHAYLMYGYPTQTIQETVDSLEMVRQLFEAGILQSGFWHQFAMTAHSPVGLYPEKFGVTKKTEAIGTFANNDIDYTDSTGINHDKFSFGLKKSLFNFMHGICFDYELQDWFDFKIPKTKIDPDFIFNALEEGNDFNTKPNAKVVWLGGKPFTEHFTKSKKGRSWEMMTFTFHDKKESFNIQTNKEEGEWLVEILTKITISNAKNYTFQEVKADFETSLEDFELFWYSKPINTLREFGLLVL
>NZ_CP042170.1|WP_078005686.1|5750735_5754791_+|T9SS-type-B-sorting-domain-containing-protein
MKQTLLLFFLLLTTHLFSQNKNQSIGFKENKGQIIDQKGKSNTAVKYLLNSNGLNVQLKKNGFSYDVYEVNKIPVVRSQTAKTLPYQIPEKDKEEKPEYNLEYTFHRIDIDFVNSNSKVELITEQKSADFDNYYNIPNKPEGITGVHQFKQITYKNIYPNIDVVFTIPNDPKKVVEYNFVIHPKGKISDIQLKFSGAETDLVDNKIEMNVRFGKMEETLPASWIEEGNRKQEIAVGYRKIKKDVYGFSSLEAVSGKTIVIDPVPTRLWGTFYGDHTGSGQVLSPSSISTDSFGNAYVAGSTNAQNSSYATTGAHQTTPSSVYLNGIIEKFAPNGNRLWGTYYGGQNYSGITDVKIDFQDNIIITGTTQDQTNISTAGSYKPNLGGYQDAFLIKFNSSGIRLWGTYFGGEYEDSGFALDVDNNDNIYIIGLTNSTTGIAINSKFQTHINVDPAFSNTIDGFLAKFGSSGNLIWSSYVGGENRDIFNDIVVKNNYLIIGGYTYSFNNISTPGVFQELHDPIRHPDGVLYKFSINGERIWSTYYGGEQIDEIYAVEVDDEDNIYIGGETASNNNMTTSGSFESSNNFSYKGFFAKLNSNGQRIWGSYLGENHISSIVFRNNSIYFGATNSGFANPKLTNACSYRSNKHFERYIAKFSKEADFIWGTDIGGDALESPTKIALDRNNNIFASGNSRENNGIADASSYQSNILGFHNYFLMKFEESVILGIPKAESNSPVCIGKTLELKASGGTNYSWTGPNGFTSTDQNPTITNATTLNSGEYSCLITGTGGCDDTKKITVVIGDVEKPVPDIVNLPTITGDCNTIISTIPTATDVCAGAITGTTTNPLSYNLPGTYTIVWSYNDGNGNISTQSQTVNITSQPLPTANSPQTFCSNQNATLDDIVVTGQNKKWYDAATAGVILPNITTVQNDVTYYVSQTIDGCESTRIPVTTKIQNTLAPTGDANQPFCTGQNPTIANIQVTGNSIKWYDAVTNGLLLQETTNLEDGKTYYASQTINNCESLRFGITVSIVNTPSAPTGNANQEFCKSENATLNDIQITGQNTKWYDTSFSAAVLPNTTVIENNKTYYVSQTIGCESERTPILVQVYDTPLPIGNNNQQFCIDEIATLENIALTGTAIKWYDSATNGNILPETTLLQNGIYYATQTVNNCESKRLAITVKIQDTQNPIADSPQTFCVQQNASIKSINITGQNIKWYQSTSSNNTLSETTVLQNGITYYASQTINNCESDRIPITINILEATQGDCINFVDELPFPKFFTPNNDGYNDTWTIDFAYLKPNTRIKIFDRYGKFIKELNSNTSWDGTYLGTNEPASDYWFTATRLNGEEYRGHFSLKR
>NZ_CP042170.1|WP_078005687.1|5754888_5756166_-|MHS-family-MFS-transporter
METTPKKKNSLKHVLFGSLIGTTIEFFDFYIYANAAVLVFPQLFFPGSNSTIATLESLATFSIAFLSRPLGSAFFGHYGDKIGRKFTLVAALLTMGISTVTIGFLPSYASIGVAAPLLLMLCRFGQGVGLGGEWGGAVLLAIENAPPNKRAWYGMFPQLGAPIGLLLSGGTFLFLTDSMSNEDFMDYGWRIPFIASSLLVVIGFYIRTKITETPSFENSKKEQEEVKVPFLTLVKSYKNQLIFGTFAAVTTFLVFYLMTVFTLSWATSDLGIVKRDGLLIQLFSVLFFAIFIPVSAVVADKIGRRKMLIIATVAIAIFGFFFSYFLSSGNIVLVTTFACIGMALMGFTYGPLGTFLSELFPTNVRYSGASLTFNMAGILGAAFAPMIAIWLASTYSVSYVGLYLTIAACISLFAFLVISKEEHKF
>NZ_CP042170.1|WP_078005688.1|5756435_5758025_+|bacillithiol-biosynthesis-cysteine-adding-enzyme-BshC
MPTDCISYQTSGYFSKLMQDYLDQKLELKTLYNNFPTLENFEKQIAEKAANFDNNNRIPLVETLRKQYQNIEISDSTKQNIELLGLQNTYTITTGHQLNLFSGPLYFLYKIISTINLTKELKLKYPSNNFVPVYWMATEDHDFEEINYFNFKGKKFRWNKESNGPVGRLSTEGLAEFFEIYSLELGSSTNASVIKKLFEEAYLKHKNLADATRFLANSLFSNYGLVILDADDANLKQAFIPYIKEELEQQTSFKAVQETIEQLKDYTVQVNPREINLFYIEDDLRERIIFENDKYFVNNTRMSFSKDEILKVLESNPEKFSPNVIMRPLYQEIILPNLCYIGGGGEIAYWLELKSFFKAVNITFPMLLVRNSVLLATEKQGKKADNLGLSWADLFTKPDNLINAITHKLSAFPIDLTPQKEILDKQFEYLYELAQQTDKSFTGAVKAQEVKQKKGLDNLEKRLLKAQKRKLENELQRVTDLQFELFPNQSLQERHTNFSEFYLEKGEQLIPLLIQKLKPLETNFNIIMI
>NZ_CP042170.1|WP_078005689.1|5758251_5759523_+|DUF5009-domain-containing-protein
MTRERLISLDVFRGLTILLMTIVNNPGDWGNVYPPLLHAEWHGCTLTDLVFPFFIFIMGVAVPLAMPDKFYDGTTFNKILVRSLRMLCLGIFFNFFGKIQLFGLEGIPLLMGRLIITVAVGYALMGSFSSKIKNILAFSILFIYLLLAYSGIEAYQDVRLPGVLQRIAIVYFVVSLLYLKTSQKTQIITGIVLLLGYWAIMTLIPVPGIGEANLDKGTNLASWLDSILLKGHMYRGTVTWDPEGILSTIPSIVNGIIGLLIGQLLQTDMIKIQKAQRMGIIGTILIFFGLIWDIIFPINKSLWTSSYVLYTTGLATVVLTILYYIIDIANYKKGFKPFLVWGVNPMIVFFTSQIIPQALVMIEFQNPHHPAEKINLLNYLYTFGIAPFFSNPMTASLAGALVYVGIWTFILWVFYKKKLIFKV
>NZ_CP042170.1|WP_065451312.1|5759740_5760160_+|nucleoside-diphosphate-kinase
MATNRTFTMIKPDAVQNGHIGNILAMITNGGFKIVSLKLTQLTVADAQAFYAVHSARPFYGELVEFMSRGPIVAAILEKDNAVEDFRTLIGATNPAEAAEGTIRKAYATSIGENAVHGSDSDENAAIEGAFHFAGREQF
>NZ_CP042170.1|WP_065451311.1|5760258_5760729_-|hypothetical-protein
MNIKSKFNFFAIFIICWITILPFLVVYLSATSRVAGMLWPVLFVAFIIFFWLTVFRTRAYKVEIDDDSVIVKRYFGAGKSVVYDFTTLDGFITLIESAKGGVYESLFILKNGKRIGSISSFYHSNFEELKSILSDKLNDMGERESSFTGECTELFK
>NZ_CP042170.1|WP_065451310.1|5760758_5761055_-|DUF721-domain-containing-protein
MAKRLNNQSTIGAVLQQIIQVNKLGPGMDQIDVKEAWRQLMGNGVNTYTKNVVLKGSTLYVELASAVLREELSHGKTKIVKMINEELGREVVKDVILR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042170_2	2.1\|936283\|27\|NZ_CP042170\|CRISPRCasFinder	936283-936309	27	NC_048827	Vibrio phage vB_VchM_Kuja, complete genome	19283-19309	5	0.815
NZ_CP042170_1	1.1\|812652\|30\|NZ_CP042170\|CRISPRCasFinder	812652-812681	30	AP013481	Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-U-MedDCM-OCT-S44-C29	28062-28091	6	0.8
NZ_CP042170_1	1.1\|812652\|30\|NZ_CP042170\|CRISPRCasFinder	812652-812681	30	MN856026	Myoviridae sp. isolate 276, complete genome	4613-4642	6	0.8
NZ_CP042170_1	1.1\|812652\|30\|NZ_CP042170\|CRISPRCasFinder	812652-812681	30	MT773556	Myoviridae sp. isolate BML_4 genomic sequence	120341-120370	7	0.767
NZ_CP042170_8	8.1\|5403033\|31\|NZ_CP042170\|CRISPRCasFinder	5403033-5403063	31	NZ_CP009649	Bacillus pseudomycoides strain BTZ plasmid pBTZ_2, complete sequence	117856-117886	9	0.71

1. spacer 2.1|936283|27|NZ_CP042170|CRISPRCasFinder matches to NC_048827 (Vibrio phage vB_VchM_Kuja, complete genome) position: , mismatch: 5, identity: 0.815

acattagtgcaattcactgtaaactgc	CRISPR spacer
attttagtggaattcaatgtaaactgg	Protospacer
*. ****** ****** *********

2. spacer 1.1|812652|30|NZ_CP042170|CRISPRCasFinder matches to AP013481 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-U-MedDCM-OCT-S44-C29) position: , mismatch: 6, identity: 0.8

gatttaccaaacgtaacattatttgctata	CRISPR spacer
gagataccaaacgtaacattacttcctaac	Protospacer
**  *****************.** ***

3. spacer 1.1|812652|30|NZ_CP042170|CRISPRCasFinder matches to MN856026 (Myoviridae sp. isolate 276, complete genome) position: , mismatch: 6, identity: 0.8

gatttaccaaacgtaacattatttgctata	CRISPR spacer
gatttaccaaacgtaaaattaaatattgta	Protospacer
**************** ****  *..*.**

4. spacer 1.1|812652|30|NZ_CP042170|CRISPRCasFinder matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 7, identity: 0.767

gatttaccaaacgtaacattatttgctata	CRISPR spacer
atcttaccaaaagttacattatttgcttga	Protospacer
. .******** ** ************  *

5. spacer 8.1|5403033|31|NZ_CP042170|CRISPRCasFinder matches to NZ_CP009649 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_2, complete sequence) position: , mismatch: 9, identity: 0.71

tttttttttgccactaaggcactaagacgct	CRISPR spacer
attttttttgcaactagggcactatgtttta	Protospacer
 ********** ****.******* * . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

347928 : 359294

Escherichia_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078005958.1\|347928_349197_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.0e-11	27.9
WP_078005959.1\|349242_350109_-	ABC transporter permease	NA	NA	NA	NA
WP_078005960.1\|350272_352240_-	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	1.9e-29	31.5
WP_078005961.1\|352325_353210_-	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	2.6e-95	59.4
WP_078005962.1\|353291_354137_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	9.7e-39	38.3
WP_078005963.1\|354136_354685_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	5.9e-37	46.6
WP_078005964.1\|354709_355846_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	1.4e-16	25.4
WP_078005965.1\|355838_356264_-	hypothetical protein	NA	NA	NA	NA
WP_078005966.1\|356260_357226_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_078005967.1\|357225_358125_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_168199919.1\|358130_359294_-	glycosyltransferase family 4 protein	A0A1V0SD18	Indivirus	2.6e-05	22.3

DBSCAN-SWA_2

783821 : 792795

Bacillus_phage(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078006803.1\|783821_785291_-	nicotinate phosphoribosyltransferase	A0A218KC49	Bacillus_phage	4.9e-155	57.2
WP_078006802.1\|785421_786156_-	serine/threonine protein phosphatase	S0A0Y6	Cellulophaga_phage	8.2e-42	35.2
WP_065448742.1\|786152_786701_-	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	5.0e-52	54.4
WP_078006801.1\|786718_787189_-	macro domain-containing protein	A0A2L1IVW3	Streptomyces_phage	2.1e-30	44.3
WP_078006800.1\|787338_788799_-	O-acetyl-ADP-ribose deacetylase	A0A1S6UB21	Serratia_phage	2.9e-46	36.7
WP_065448744.1\|788806_789334_-	NADAR family protein	A0A0E3TB23	Enterococcus_phage	5.7e-37	45.3
WP_078006799.1\|789341_790424_-	adenylosuccinate synthetase	NA	NA	NA	NA
WP_078006798.1\|790583_791459_-	hypothetical protein	NA	NA	NA	NA
WP_078006797.1\|791461_791797_-	hypothetical protein	NA	NA	NA	NA
WP_078006796.1\|791976_792795_-	TIGR02452 family protein	G3MBH6	Bacillus_virus	2.6e-49	41.8

DBSCAN-SWA_3

2971782 : 3058155

Bacillus_phage(38.46%)

transposase,integrase,protease

attL 2962948:2962964|attR 3033328:3033344

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2962948:2962964	attL	NA	NA	NA	NA
WP_078008037.1\|2971782_2973042_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.4e-12	27.6
WP_078008036.1\|2973038_2973788_+	hypothetical protein	NA	NA	NA	NA
WP_078008035.1\|2973895_2974246_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_144825144.1\|2975058_2982672_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA
WP_168199938.1\|2982739_2983573_+	PorT family protein	NA	NA	NA	NA
WP_078009006.1\|2984131_2986306_+	alpha-N-acetylglucosaminidase	NA	NA	NA	NA
WP_078008993.1\|2986586_2989598_+	TonB-dependent receptor	NA	NA	NA	NA
WP_078008992.1\|2989616_2991230_+	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA
WP_078008991.1\|2991511_2993830_+	glycoside hydrolase family 92 protein	NA	NA	NA	NA
WP_078009005.1\|2994010_2996287_+	glycoside hydrolase family 92 protein	NA	NA	NA	NA
WP_078008990.1\|2996300_2996867_+	hypothetical protein	NA	NA	NA	NA
WP_078008989.1\|2997698_2999528_+	metallophosphoesterase	NA	NA	NA	NA
WP_078008988.1\|2999580_3003615_+	hybrid sensor histidine kinase/response regulator transcription factor	Q6XLV6	Feldmannia_irregularis_virus	8.3e-19	26.9
WP_078008987.1\|3004004_3004883_+	inositol oxygenase	A0A2K9L6K3	Tupanvirus	6.5e-62	46.8
WP_078008986.1\|3004926_3008067_+	DUF4981 domain-containing protein	L0N6M2	Herpes_simplex_virus	7.3e-164	34.2
WP_078008985.1\|3008174_3009317_+	DUF5009 domain-containing protein	NA	NA	NA	NA
WP_078008984.1\|3009372_3011010_+	sodium/solute symporter	A0A219Y9P9	Aeromonas_phage	4.6e-77	36.9
WP_078008983.1\|3011258_3012788_+	glycoside hydrolase	NA	NA	NA	NA
WP_078008982.1\|3012858_3014298_+	glycoside hydrolase	A0A1Z1DEI0	Bacillus_phage	2.2e-06	35.7
WP_078008981.1\|3014318_3016295_+	carbohydrate-binding protein	NA	NA	NA	NA
WP_078008980.1\|3016342_3018814_+	glycoside hydrolase family 95 protein	NA	NA	NA	NA
WP_078008978.1\|3019915_3020524_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_078008977.1\|3020554_3021712_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	3.1e-35	35.9
WP_078008976.1\|3022215_3023868_+	hypothetical protein	NA	NA	NA	NA
WP_123921870.1\|3023897_3024089_+	hypothetical protein	NA	NA	NA	NA
WP_078008975.1\|3024188_3025424_+	hypothetical protein	NA	NA	NA	NA
WP_078008974.1\|3025439_3027683_+	lantibiotic dehydratase family protein	A0A2H4PQG8	Staphylococcus_phage	7.6e-22	23.5
WP_168199939.1\|3027684_3028575_+	hypothetical protein	NA	NA	NA	NA
WP_078008972.1\|3028598_3029819_+	hypothetical protein	NA	NA	NA	NA
WP_123921869.1\|3029808_3030696_+	hypothetical protein	NA	NA	NA	NA
WP_078008971.1\|3030730_3032950_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	2.1e-40	29.9
WP_078008970.1\|3032953_3034246_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
3033328:3033344	attR	NA	NA	NA	NA
WP_078008969.1\|3034293_3035097_-	hypothetical protein	A0A167R6Q6	Powai_lake_megavirus	2.2e-16	32.5
WP_078008968.1\|3035189_3035372_+	hypothetical protein	NA	NA	NA	NA
WP_078008967.1\|3035515_3036922_-	hypothetical protein	NA	NA	NA	NA
WP_078008966.1\|3036994_3037801_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_078008965.1\|3038454_3039843_-	S41 family peptidase	NA	NA	NA	NA
WP_168199940.1\|3039881_3042185_-	TonB-dependent receptor	NA	NA	NA	NA
WP_123921868.1\|3042358_3043525_-	DUF418 domain-containing protein	NA	NA	NA	NA
WP_168199941.1\|3043546_3044527_-	serine hydrolase	NA	NA	NA	NA
WP_078008961.1\|3045036_3045723_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_078008960.1\|3046018_3048415_-	TonB-dependent receptor	NA	NA	NA	NA
WP_078008959.1\|3048696_3050022_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_078008958.1\|3050018_3050711_+	response regulator transcription factor	W8CYM9	Bacillus_phage	5.0e-33	35.4
WP_123921866.1\|3050736_3051165_+	hypothetical protein	NA	NA	NA	NA
WP_078008956.1\|3051656_3052766_+	serine hydrolase	NA	NA	NA	NA
WP_123921864.1\|3053273_3053804_-	hypothetical protein	NA	NA	NA	NA
WP_078008953.1\|3054092_3055115_+	serine hydrolase	A0A2H4JAN9	uncultured_Caudovirales_phage	9.1e-15	27.3
WP_078008952.1\|3055176_3055929_-	hypothetical protein	NA	NA	NA	NA
WP_078008951.1\|3056361_3056967_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_078008950.1\|3056997_3058155_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.9e-33	34.4

DBSCAN-SWA_4

5214826 : 5221423

Synechococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078005360.1\|5214826_5215783_-	GDP-L-fucose synthase	M4R1H4	Synechococcus_phage	1.8e-89	50.8
WP_078005361.1\|5215785_5216901_-	GDP-mannose 4,6-dehydratase	M1IBC3	Acanthocystis_turfacea_Chlorella_virus	1.1e-125	62.0
WP_065450392.1\|5217004_5218009_-	NTP transferase domain-containing protein	A0A1V0SH58	Hokovirus	9.5e-33	30.1
WP_065450393.1\|5218005_5218434_-	adenylyltransferase/cytidyltransferase family protein	A0A218MN49	uncultured_virus	1.1e-38	56.2
WP_065450395.1\|5218953_5220351_+	UDP-glucose 6-dehydrogenase	A0A127AXI2	Bacillus_phage	4.8e-59	32.5
WP_078005362.1\|5220405_5220888_+	UpxY family transcription antiterminator	NA	NA	NA	NA
WP_078005363.1\|5220907_5221423_+	phosphoheptose isomerase	M1I1H5	Paramecium_bursaria_Chlorella_virus	3.0e-06	35.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP042170

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection