CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019870	Clostridioides difficile strain BR81 chromosome, complete genome	17 crisprs	WYL,csa3,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,cas14j,DEDDh,RT,cas14k,DinG	5	58	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019870_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_1

287215-288600

Orphan

Consensus_repeat	Method
NCAACAGGNGCAACAGGN	CRT

28 spacers

The CRISPR arrays of NZ_CP019870_1

>merge|NZ_CP019870|1|287215-288600|CRT
CCAACAGGCCCAATGGGTCCAAGAGGTAGAACCGGCCCAACAGGTCCAACGGGTCCAACAGGTCCAGGAGTAGGGGCAACAGGCCCAACAGGACCAACCGGTCCGACTGGTCCAACAGGAAATACAGGGAATACAGGAGCAACAGGATTAAGAGGTCCAACAGGAGCAACAGGGGCAACAGGCCCAACAGGAGCTATAGGGTTTGGAGTAACAGGTCCAACAGGCCCAACAGGAGCGACAGGAGCAACAGGAGCAGATGGAGTAACAGGTCCAACAGGTCCAACGGGAGCAACAGGAGCAGATGGAATAACAGGTCCAACAGGAGCAACAGGGGCAACAGGATTTGGAGTAACAGGTCCAACAGGCCCAACAGGAGCAACAGGAGTAGGAGTAACAGGAGCAACAGGATTAATAGGTCCAACAGGAGCAACAGGAACACCTGGAGCGACAGGCCCAACAGGAGCAGTAGGAGCAACAGGAATAGGAATAACAGGTCCAACAGGTCCAACAGGAGCAACAGGAGCAGACGGAGCAACAGGAGTAACAGGTCCAACAGGGGCAACAGGAGCAGATGGAGTAACAGGTCCAACAGGGGCAACAGGAGCAACAGGATTTGGAGTGACAGGCCCAACAGGTCCAACAGGAGCAACAGGAATAGGAATAACAGGAGCAACAGGGTTAATAGGTCCAACCGGAGCAACGGGAGCAACAGGAGCAACAGGCCCAACAGGAGTAACAGGGGCAACAGGAGCAGCAGGACTAATAGGACCAACCGGGGCAACAGGAGCAACCGGAGCAGATGGAGCAACCGGAGCGACAGGGGCAACAGGAGCAACAGGTCCAACAGGAGCAGATGGATTAGTAGGTCCAACAGGAGCAACAGGAGCAACAGGAGCAGATGGATTAGTAGGCCCAACAGGTCCAACAGGGGCAACAGGAGTAGGAATAACAGGAGCAACAGGAGCAACAGGAGCGACAGGTCCAACAGGGGCAGATGGATTAGTAGGTCCAACAGGAGCGACGGGAGCAACAGGAGCAGATGGAGTAGCAGGTCCAACAGGAGCAACAGGAGCAACAGGAAATACAGGAGCAGATGGAGCAACAGGTCCAACAGGGGCAACAGGTCCAACAGGAGCAGACGGATTAGTAGGTCCAACAGGAGCAACAGGAGCAACAGGATTAGCAGGAGCAACAGGAGCAACAGGCCCAATAGGAGCAACAGGTCCAACAGGAGCAGATGGAGCAACAGGGGCAACAGGAGCAACAGGTCCAACAGGTCCAACAGGGGCAGATGGATTAGTAGGTCCAACAGGAGCAACCGGAGCAACCGGAGCGACCGGAGCAACAGGTCCAACAGGAGCAACAGGAGCAACAGGAGCAACAGGT

>NZ_CP019870|1|1|287215-288600|CRT
CCAACAGGCCCAATGGGT	CCAAGAGGTAGAACCGGC
CCAACAGGTCCAACGGGT	CCAACAGGTCCAGGAGTAGGGGCAACAGGC
CCAACAGGACCAACCGGT	CCGACTGGTCCAACAGGAAATACAGGGAATACAGGAGCAACAGGATTAAGAGGT
CCAACAGGAGCAACAGGG	GCAACAGGCCCAACAGGAGCTATAGGGTTTGGAGTAACAGGTCCAACAGGC
CCAACAGGAGCGACAGGA	GCAACAGGAGCAGATGGAGTAACAGGTCCAACAGGT
CCAACGGGAGCAACAGGA	GCAGATGGAATAACAGGT
CCAACAGGAGCAACAGGG	GCAACAGGATTTGGAGTAACAGGTCCAACAGGC
CCAACAGGAGCAACAGGA	GTAGGAGTAACAGGAGCAACAGGATTAATAGGT
CCAACAGGAGCAACAGGA	ACACCTGGAGCGACAGGC
CCAACAGGAGCAGTAGGA	GCAACAGGAATAGGAATAACAGGTCCAACAGGT
CCAACAGGAGCAACAGGA	GCAGACGGAGCAACAGGAGTAACAGGT
CCAACAGGGGCAACAGGA	GCAGATGGAGTAACAGGT
CCAACAGGGGCAACAGGA	GCAACAGGATTTGGAGTGACAGGCCCAACAGGT
CCAACAGGAGCAACAGGA	ATAGGAATAACAGGAGCAACAGGGTTAATAGGTCCAACCGGA
GCAACGGGAGCAACAGGA	GCAACAGGCCCAACAGGAGTAACAGGG
GCAACAGGAGCAGCAGGA	CTAATAGGACCAACCGGG
GCAACAGGAGCAACCGGA	GCAGATGGAGCAACCGGAGCGACAGGG
GCAACAGGAGCAACAGGT	CCAACAGGAGCAGATGGATTAGTAGGT
CCAACAGGAGCAACAGGA	GCAACAGGAGCAGATGGATTAGTAGGCCCAACAGGT
CCAACAGGGGCAACAGGA	GTAGGAATAACAGGAGCAACAGGAGCAACAGGAGCGACAGGT
CCAACAGGGGCAGATGGA	TTAGTAGGTCCAACAGGAGCGACGGGA
GCAACAGGAGCAGATGGA	GTAGCAGGTCCAACAGGA
GCAACAGGAGCAACAGGA	AATACAGGAGCAGATGGAGCAACAGGTCCAACAGGG
GCAACAGGTCCAACAGGA	GCAGACGGATTAGTAGGTCCAACAGGA
GCAACAGGAGCAACAGGA	TTAGCAGGAGCAACAGGAGCAACAGGCCCAATAGGA
GCAACAGGTCCAACAGGA	GCAGATGGAGCAACAGGGGCAACAGGA
GCAACAGGTCCAACAGGT	CCAACAGGGGCAGATGGATTAGTAGGTCCAACAGGAGCAACCGGAGCAACCGGA
GCGACCGGAGCAACAGGT	CCAACAGGAGCAACAGGA
GCAACAGGAGCAACAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_003429149.1\|279884_280340_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP019870.1\|WP_009898508.1\|285918_286995_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NZ_CP019870.1\|WP_003436212.1\|285022_285607_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955
NZ_CP019870.1\|WP_003436216.1\|280977_281301_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP019870.1\|WP_003437288.1\|292655_293972_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340412
NZ_CP019870.1\|WP_003437293.1\|294182_294764_+\|accessory-gene-regulator-B-family-protein	unknown	unknown	gnl\|CDD\|377395
NZ_CP019870.1\|WP_003437302.1\|297201_298074_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213231
NZ_CP019870.1\|WP_003429152.1\|281452_281971_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380330
NZ_CP019870.1\|WP_003437271.1\|289296_290058_+\|epoxyqueuosine-reductase	unknown	unknown	gnl\|CDD\|224516
NZ_CP019870.1\|WP_003437290.1\|293983_294124_+\|cyclic-lactone-autoinducer-peptide	unknown	unknown	gnl\|CDD\|275064
NZ_CP019870.1\|WP_003437285.1\|291951_292662_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP019870.1\|WP_003436215.1\|282146_282815_-\|tRNA-binding-protein	unknown	unknown	gnl\|CDD\|225917
NZ_CP019870.1\|WP_003436213.1\|284567_285026_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP019870.1\|WP_003436214.1\|282929_284345_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP019870.1\|WP_078051017.1\|277464_279003_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP019870.1\|WP_003437295.1\|295020_295395_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003437274.1\|290366_290645_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|337191
NZ_CP019870.1\|WP_003436217.1\|280388_280973_+\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153229
NZ_CP019870.1\|WP_022621801.1\|295477_297187_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003437281.1\|290937_291513_+\|DUF1062-domain-containing-protein	unknown	unknown	gnl\|CDD\|368855

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_003429149.1\|279884_280340_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	8.34794e-35
NZ_CP019870.1\|WP_009898508.1\|285918_286995_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	1.40873e-44
NZ_CP019870.1\|WP_003436212.1\|285022_285607_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	4.23134e-132
NZ_CP019870.1\|WP_003436216.1\|280977_281301_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.36446e-45
NZ_CP019870.1\|WP_003437288.1\|292655_293972_+\|sensor-histidine-kinase	gnl\|CDD\|340412	cd16935, HATPase_AgrC-ComD-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Staphylococcus aureus AgrC and Streptococcus pneumoniae ComD which are involved in quorum sensing. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) including Staphylococcus aureus AgrC which is an HK of the accessory gene regulator (agr) quorum sensing two-component regulatory system (TCS) AgrC-AgrA. The agr system plays a part in the transition from persistent to virulent phenotype. This family also includes Streptococcus pneumoniae ComD HK of the ComD-ComE TCS, involved in quorum sensing and genetic competence.	1.53519e-27
NZ_CP019870.1\|WP_003437293.1\|294182_294764_+\|accessory-gene-regulator-B-family-protein	gnl\|CDD\|377395	pfam04647, AgrB, Accessory gene regulator B. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein.	1.27192e-23
NZ_CP019870.1\|WP_003437302.1\|297201_298074_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	2.10236e-94
NZ_CP019870.1\|WP_003429152.1\|281452_281971_+\|nitroreductase-family-protein	gnl\|CDD\|380330	cd20609, nitroreductase, nitroreductase family protein. A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.often found to be homodimers.	9.18693e-93
NZ_CP019870.1\|WP_003437271.1\|289296_290058_+\|epoxyqueuosine-reductase	gnl\|CDD\|224516	COG1600, COG1600, Uncharacterized Fe-S protein [Energy production and conversion].	3.36024e-20
NZ_CP019870.1\|WP_003437290.1\|293983_294124_+\|cyclic-lactone-autoinducer-peptide	gnl\|CDD\|275064	TIGR04223, quorum_AgrD, cyclic lactone autoinducer peptide. Members of this family of short peptides are precursors to thiolactone (unless Cys is replaced by Ser) cyclic autoinducer peptides, used in quorum-sensing systems in Gram-positive bacteria. The best characterized is the AgrD precursor, processed by the AgrB protein. Nearby proteins regularly encountered include a histidine kinase and a response regulator. This model is related to pfam05931 but is newer and currently broader in scope.	0.000229804
NZ_CP019870.1\|WP_003437285.1\|291951_292662_+\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	9.30252e-34
NZ_CP019870.1\|WP_003436215.1\|282146_282815_-\|tRNA-binding-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	5.78705e-13
NZ_CP019870.1\|WP_003436213.1\|284567_285026_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.16904e-28
NZ_CP019870.1\|WP_003436214.1\|282929_284345_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	2.29737e-129
NZ_CP019870.1\|WP_078051017.1\|277464_279003_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	1.29844e-166
NZ_CP019870.1\|WP_003437274.1\|290366_290645_+\|hypothetical-protein	gnl\|CDD\|337191	pfam08765, Mor, Mor transcription activator family. Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.	0.00270359
NZ_CP019870.1\|WP_003436217.1\|280388_280973_+\|DJ-1/PfpI-family-protein	gnl\|CDD\|153229	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. DJ-1 is involved in multiple physiological processes including cancer, Parkinson's disease and male fertility. It is unclear how DJ-1 functions in these. DJ-1 has been shown to possess chaperone activity. DJ-1 is preferentially expressed in the testis and moderately in other tissues; it is induced together with genes involved in oxidative stress response. The Drosophila homologue (DJ-1A) plays an essential role in oxidative stress response and neuronal maintenance. Inhibition of DJ-1A function through RNAi, results in the cellular accumulation of reactive oxygen species, organismal hypersensitivity to oxidative stress, and dysfunction and degeneration of dopaminergic and photoreceptor neurons. DJ-1 has lacks enzymatic activity and the catalytic triad of typical GATase1 domains, however it does contain the highly conserved cysteine located at the nucelophile elbow region typical of these domains. This cysteine been proposed to be a site of regulation of DJ-1 activity by oxidation. DJ-1 is a dimeric enzyme.	4.59295e-56
NZ_CP019870.1\|WP_003437281.1\|290937_291513_+\|DUF1062-domain-containing-protein	gnl\|CDD\|368855	pfam06353, DUF1062, Protein of unknown function (DUF1062). This family consists of several hypothetical bacterial proteins of unknown function.	2.9589e-55

>NZ_CP019870.1|WP_009898508.1|285918_286995_+|glycosyltransferase-family-2-protein
MITISLCMIVKNEEEVIGRCLECVKDIVDEIIIVDTGSTDSTKEIVSKYTDMVYDFEWIDDFSAARNFSFSKASKDYTMWLDADDIILEADREKLLKIKESLDTSIDIVMAKYNVSFDENGNPTLSYYRERLFKRSSNHKWVDPIHEVVPLFGEVFYSDIAISHKKLHRQDPLRNLRIFEKMISEGKTLEPRHQFYYSRELYYNARYKEAIEGFTKFLDSSRGWIEDCISACRDLATCYYLINDEKSALYSLFRSFEFDEPRAEICCDIGKHMFDRQKYKEAIFWYKVALTRDKNDTNGGFKSNDCYGYIPSIQLSVCYDRLGESDKAIYYHEKTKEIKPNDSAVLHNENYFSKFKNS
>NZ_CP019870.1|WP_003436212.1|285022_285607_+|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MSLVPHVIEQTGQGERSYDIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDIIIYINSPGGSATSGFAIYDTMNYVRCDVSTICIGMAASMSAFLLAGGTHGKRCALPNSEIMIHQPMGGAKGQATDVKIAVDNILKIKERLDKILSENTGKSIEDIRRDTDRDNFMTALEAKEYGLIDYIMNRNE
>NZ_CP019870.1|WP_003436213.1|284567_285026_+|helix-turn-helix-transcriptional-regulator
MEIIDYIEENLTENLNLDKIAYIANYSKYHLHRMFTNVVGCTIHQYIQRRRLTEAARQLIFTDKYIIDIAITVGYSTHQSFTLAFRNLYKESPQVYRNKDEFYPIQQRFVLNLNHQIQSEKCISYANMNYKQRRDEINSYLNFNINCEVKVA
>NZ_CP019870.1|WP_003436214.1|282929_284345_+|PLP-dependent-aminotransferase-family-protein
MWITINRNSNISLSRQIYCEIKDMILDGSLKFEQKLPSSRTLSKELSVSRNTVLDAYNQLIAEGYLETRNGYGTIVAKGISGHKVDFKLNDTFRDEKDLHTNKQKNYIDFRSGVPELKLFPRKELSKLYKQILYDLSDSDFRYGSTAGVWVLRVEISKYLFRTRGIRCNPKNIMIVSGSTQGLSLISQLLYKSNKKVAVEDPIHKGLLKVISSIGYSVVGIKVDDKGMNTNLIKSIKGISFVYTTPSHQYPLGGILPIQRRLELIKCATENDYYIIEDDYDSEFRYEGQPISSLYELSPNKVIYIGSFSKILSPAIRVGFMLLPDNILESYKTLKMYSDVHTETILQHVLAEFIGNGGLEKYIFRMKKLYNRKRKYLIKVLNTEFKNEFKIKGEAAGLHIVAHFYNVKFTESLIHKIFEAGIKVYPIQQYAIENILEYDYEIILGYAHLSFDEIEKGVKILSKIIHMNQGT
>NZ_CP019870.1|WP_003436215.1|282146_282815_-|tRNA-binding-protein
MLEVSHKVKEIYPNIKFGVMVINITHSKPNKENFLVLKNSTIKNIIEQHPEYNRKEKIKTEPVSSYIKYYKKFKKTYPVLLQLESILLKSKGIPDVGVTIESMFLAELKNLLLTAGHDLDKMELPLKIELANGSEHFYGIGGKEHILTKDDLFLSDNIGILSSILNGPDNRTAITKDTKNIMYFVYGPDKISEKQIQDHLNDIKHYISSAFPDLKVNSIDIF
>NZ_CP019870.1|WP_003429152.1|281452_281971_+|nitroreductase-family-protein
MNFVELAKKRYSCRNYQDRKVEKEKLEKVLDVARIAPTGGNRQPQRLIVIQEKEGINKLSKAANIYDAPLAILVCGDKDKVWTRPFDGKQLTDIDTSIVTDHMMLQATELGLASVWVCYFNPDIIREEFSLPDNLEPINILLMGYESKIPESPERHEKTRVPLSEIVSYETL
>NZ_CP019870.1|WP_003436216.1|280977_281301_-|helix-turn-helix-transcriptional-regulator
MKKCLDNYSCPIEATLALIGGKYKTLILWHLKDTILRFNELKKLIPKATPKMLTQQLRELESDGLIIRVVYPVVPPKVEYSLSDFGKSIIPILDSMCDWGSDYLENL
>NZ_CP019870.1|WP_003436217.1|280388_280973_+|DJ-1/PfpI-family-protein
MKVLVFLAKGFETMEFSVFVDVMGWARNDYGHDIDVVTCGFKKQVMSTFNIQVLVDKTIEEVCVDDYDALAIPGGFEEFGFYDEAYDSSFLNLIREFNSKEKIIASICVAALPVGKSGVLKNRKATTYHLKNGKRQRQLSEFDVNVVNEPIVVDKNIITSYCPETAPHVAFKLLEMLTSKEQMDEVKLAMGFKL
>NZ_CP019870.1|WP_003429149.1|279884_280340_+|Lrp/AsnC-family-transcriptional-regulator
MDEIDLKIINSLKKNSRASTSEISRQINLSVPAVSERIRKIEQSNLIQKYTIQINREKTKYKLLAFIFINTDLSKSMKEFKKTILEYDTVLECHHISGEYDYLIKVLAEDTSNLEEFISVTLKEIGGIQKANTTIVLSTIKEEFNTIKDIF
>NZ_CP019870.1|WP_078051017.1|277464_279003_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSLLKVTNLSQCFMDKSLYEKANFDLFKGEHIGVVGQNGTGKSTLIKILLGEVVPDSGEIKWQPNINIGHLDQYAEINRDTTISLYLHTAFEELYKIEKEMNLLYQKSAISENEQYLIKASDYQEQLIASNFYSIDNEINKIANGLGLDSIGMNRVVRELSGGQRAKVILAKLLLSNHDVLLLDEPTNFLDKEHVEWLSNYLNTFNGAFIVVSHDFDFLEKISTGILDIEFGMIKKYHGKYSEFLKQKSHLREDYIRRYQAQQKKIEKEETFIRKNKAGVNSKIARGRQKQLDKIERIAPPSFTGKPNIQFSEIEISAQNALTITNLEVGYYYSLLPKLNFSVDGGQKIVITGFNGIGKSTLLKTLVKDIPRISGDFQFSEQVKIGYYEQDLKWENPDKTPLQIIADKYPKLNTKEIRRHLARCGVKEEHVSRSVSTLSGGEQSKVKLCCMMLSPCNFLILDEPTNHFDAETKDALQNALKQFRGSIILVSHEEKFYKGWIDKVFNIEKQLV
>NZ_CP019870.1|WP_003437271.1|289296_290058_+|epoxyqueuosine-reductase
MKNKIEISMNNFVKNYHKSNNITTKWQELLFAYASAEDDMFQKLKSVVGTSHAMPKDFLENGKTIITYFIPFDESVNNSNIGGFECSEIWARAYIETNMLISNLNDFLCEELEKMGANSYAIPGSYNFDSEKLVSDWSQRHVAFIAGLGTFGLNNMLITEKGCCGRIGSIITSLELEPTKRPENEYCLYKHNNSCKKCVNKCVKEALKEDGFNRNKCYEMCMINEKKYTYIGGCDICGKCIVGVPCSVINPSR
>NZ_CP019870.1|WP_003437274.1|290366_290645_+|hypothetical-protein
MSYKKAIHILPEELLELIQEYVDGECIYIPRKSNNKKEWGSNTPTREELSIRNMQIYEDYQVGYDLQYLSEKYYLSLKSIQRIVLQEKRKDI
>NZ_CP019870.1|WP_003437281.1|290937_291513_+|DUF1062-domain-containing-protein
MKKITWEVEYISQLPVIRYCKKCGKKTEYICSGLFRVNAQHKYLDIWLIYKCSNCDSTWNSTIYSRVNPNRLSTETLEQFHTNDDNLANQYAMNVELLHRNGAEVGIPEYKIVGQEIDINDLTQVRIVSKYPSQLKVSALLREKLGLSRKAFDEMLDCGTIKSISGVDLRRSKLNYEIVLEVGKQKQKSSN
>NZ_CP019870.1|WP_003437285.1|291951_292662_+|response-regulator-transcription-factor
MINIGICDDELHYRIKIKDILSEILSSYPINYNIYEFSAGEELLNNYPKDLDILIMDIQMKTINGMDTARKIREFDHKLEIIFVTSFVEFMQEGYEVKAYRYILKPINKEKISKSVLPCINEMMKKRNNYLTINVKNYVDRIKIDSITYIETDRPNILIYTHDDMYITKMSISKIEKILNEYGFFRCHNSYIVNLKLVESMSGSTVIVDGKSIPISKYRVKGLKLAITNILGDIVC
>NZ_CP019870.1|WP_003437288.1|292655_293972_+|sensor-histidine-kinase
MLTNLSVGFWNIINLVSGTIDWIIFFLVIHLVGKRKISNIRYIFTTIIIIIFMAYINVVKVFPNIKILLCMVIGISFYITSYEDKIYKSIIVSLLFWLGLMVAEGSAVGLVVFINKLNNINITQHENLFRIQAIIMSKVFLFIGFILFKYFKLSLDFKPKDMILIGIPILSNIVSLLLIFEYNLRVNTITTENLFIFIFAILLILSSSIILLIVIGKIVQDDKLNLEYELINERIKTNYRNYENINEVHDRLKYVYHDLKNHMICIKNYDTKEEIISYINNLEFQISEFEHFKNTGNKTLDLILAEKISICKKYDIQIEDNINISKLNFIKNNDICSIFANSLDNAIEACMDINNEIEKRIEVKATYINKFAIIKFINTKVNDIKLIDKRIQTSKDDDNIHGIGLASIKYIVNKYGGETIVNYSDNEFILKIMIPIKS
>NZ_CP019870.1|WP_003437290.1|293983_294124_+|cyclic-lactone-autoinducer-peptide
MKKIALNLLKNISALSFGIAVLSANSASSWVAHQAKEPQALQKLKK
>NZ_CP019870.1|WP_003437293.1|294182_294764_+|accessory-gene-regulator-B-family-protein
MFKRLSYKFANILVNNEIVESEDFEIYRYGFETLIYFIVNILVALFIGIIFDRFIHTVIFLSCYCTLRQFTGGYHARNYKECTLTFVVIYLITIFSANNIDINKYKYLLVLLMIISILTIYKLAPLEHRNKPLSESEKKHYRKTVQKILFVIICLIILCKILNIFQQYVIYAIISIYWIAILIYIGMKVNSDQ
>NZ_CP019870.1|WP_003437295.1|295020_295395_+|hypothetical-protein
MNLKKKIKKLGVTFAIGTIIVSSLGTSVFADEVSTYALISKAFSGKNNIISSSVYTSGSRTFKTTDSQGGFSCRLTERFSGSSPDRIVKRHEANASSKVSLSGGTYYIRYEGSTNNAKTYATLN
>NZ_CP019870.1|WP_022621801.1|295477_297187_+|hypothetical-protein
MSSIKVISDFITKIIRKNILFAITIIIINYHLIQRWTHISNRGISFNDYLSLSVYTCMTISILTMLNVIFYMRKSYDTVKILCRNNFDYFLGISVAVTRNNFIFCCIPIIYAIAYSSLIRTLSIVTIKSTIFILIFEWFLPLTILSIVISFISVIINNLILKITLSSVFLYLTSTNMLDRVIDIKEPFFKALFKSLNIFEDQSYAYYSDFVGKVNNSAYVIDKIIPTLFAITLIIVAYLILNDIRKKQIKSLIVIVVYSILFIGLNYISIDMSTYRDEERSYGEYLKKSNISDIKIKSHDMKIDFKSKSNIKDRIVLLNTSNEELTNINMILDEIFDIKYIKINSENIKFNKKKDLIEVNLKESLEPNDEVTLDIEYEGYINVLTSWNQNKYIATKDDIMLPPGSLAWYPKVNQSSCMAYKINLSSKNNVYSNLPLLNKTSNFLKKDYIFEGKSNDIAIYAGEFKEEVKDDIKIIYPSDSNVNMDIEEKIKFLIETRNEILGDSKASVDAKKYVDEVDNVMESIKRKKINMILVADLPSNEFLYEDSKGEKISITIYHWLSGNILIIDK
>NZ_CP019870.1|WP_003437302.1|297201_298074_+|ATP-binding-cassette-domain-containing-protein
MINKLEIRNLNFNYKNKKALDNINLTLTDGVVALLGPNGAGKSTLMRLLVTLYETSIGEIELNNIKYSKNNEKIKANVGYVPQDFDMYNNINGQEYLEFVAKMRGVSKNDLKKHIQKVVSKVNLDKFINKKIGTYSGGVKRRLGIAQALIGDSKLIVMDEPTVGLDPEQRNEFRRLLPEISKNSIVLISTHIVEDIQFNCDKLIILNQGKILYDGTINKFIDMVEVYSVVVSNDEFEYLERNIDIIDYRRVKDGVQVKYIGKNTEKLKDSLRIDTTLQDAYINFLHKELK

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Crispr_ID: NZ_CP019870_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_3

753935-754027

Unclear

I-A

Consensus_repeat	Method
GTTTTATATTAACTAAGTGGTATGTAAAT	CRISPRCasFinder

1 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

The CRISPR arrays of NZ_CP019870_3

>merge|NZ_CP019870|3|753935-754027|CRISPRCasFinder
ATTTTATATTAATAAAGCAGTATATAAAATTGTAGAATCAACAATAGCATATACTAAAACATCCACCTTATATTAACTAAATCATATCTAAAT

>NZ_CP019870|3|2|753935-754027|CRISPRCasFinder
ATTTTATATTAATAAAGCAGTATATAAAA	TTGTAGAATCAACAATAGCATATACTAAAACATCC
ACCTTATATTAACTAAATCATATCTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_003439781.1\|750664_751645_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP019870.1\|WP_021369122.1\|746146_747061_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
NZ_CP019870.1\|WP_003439788.1\|743524_744262_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
NZ_CP019870.1\|WP_078051018.1\|764566_766786_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP019870.1\|WP_021369117.1\|756650_757787_+\|thiolase-family-protein	unknown	unknown	gnl\|CDD\|238383
NZ_CP019870.1\|WP_003439784.1\|747774_750096_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP019870.1\|WP_003439771.1\|757790_759182_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341288
NZ_CP019870.1\|WP_003439791.1\|742529_743447_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_CP019870.1\|WP_003439759.1\|761636_764291_+\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
NZ_CP019870.1\|WP_009891255.1\|756073_756619_+\|biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|376871
NZ_CP019870.1\|WP_003439787.1\|744267_746145_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
NZ_CP019870.1\|WP_003429956.1\|760135_760726_+\|dipicolinate-synthase-subunit-B	unknown	unknown	gnl\|CDD\|181370
NZ_CP019870.1\|WP_003439770.1\|759257_760133_+\|dipicolinate-synthase-subunit-DpsA	unknown	unknown	gnl\|CDD\|181371
NZ_CP019870.1\|WP_003439785.1\|747062_747764_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
NZ_CP019870.1\|WP_003439780.1\|751647_751914_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP019870.1\|WP_003439776.1\|754087_754516_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|236715
NZ_CP019870.1\|WP_021364737.1\|760932_761133_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003439793.1\|740334_742251_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376899
NZ_CP019870.1\|WP_003439775.1\|754970_755750_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003439783.1\|750110_750662_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_003439781.1\|750664_751645_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	9.94583e-175
NZ_CP019870.1\|WP_021369122.1\|746146_747061_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	3.12381e-53
NZ_CP019870.1\|WP_003439788.1\|743524_744262_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	1.2634e-19
NZ_CP019870.1\|WP_078051018.1\|764566_766786_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.80399e-106
NZ_CP019870.1\|WP_021369117.1\|756650_757787_+\|thiolase-family-protein	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	5.48992e-109
NZ_CP019870.1\|WP_003439784.1\|747774_750096_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	4.58131e-56
NZ_CP019870.1\|WP_003439771.1\|757790_759182_+\|AMP-binding-protein	gnl\|CDD\|341288	cd17633, AFD_YhfT-like, fatty acid-CoA ligase VraA. This family of acyl-CoA ligases includes Bacillus subtilis YhfT, as well as long-chain fatty acid-CoA ligase VraA, all of which are as yet to be characterized. These proteins belong to the adenylate-forming enzymes which catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain	1.85636e-145
NZ_CP019870.1\|WP_003439791.1\|742529_743447_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	6.49106e-40
NZ_CP019870.1\|WP_003439759.1\|761636_764291_+\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
NZ_CP019870.1\|WP_009891255.1\|756073_756619_+\|biotin-transporter-BioY	gnl\|CDD\|376871	pfam02632, BioY, BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.	2.43536e-36
NZ_CP019870.1\|WP_003439787.1\|744267_746145_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.7324e-23
NZ_CP019870.1\|WP_003429956.1\|760135_760726_+\|dipicolinate-synthase-subunit-B	gnl\|CDD\|181370	PRK08305, spoVFB, dipicolinate synthase subunit B; Reviewed.	6.40655e-126
NZ_CP019870.1\|WP_003439770.1\|759257_760133_+\|dipicolinate-synthase-subunit-DpsA	gnl\|CDD\|181371	PRK08306, PRK08306, dipicolinate synthase subunit DpsA.	7.8671e-132
NZ_CP019870.1\|WP_003439785.1\|747062_747764_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.28951e-66
NZ_CP019870.1\|WP_003439780.1\|751647_751914_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.64696e-28
NZ_CP019870.1\|WP_003439776.1\|754087_754516_+\|N-acetyltransferase	gnl\|CDD\|236715	PRK10562, PRK10562, putative acetyltransferase; Provisional.	8.2844e-47
NZ_CP019870.1\|WP_003439793.1\|740334_742251_+\|ABC-transporter-permease	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	4.37101e-09
NZ_CP019870.1\|WP_003439783.1\|750110_750662_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.80592e-59

>NZ_CP019870.1|WP_003439780.1|751647_751914_+|CRISPR-associated-endonuclease-Cas2
MFVIVTYDIVEARSLNRIRRILRKYLTWTQNSVFEGNITEGKLHKCISEIENIIDNSEDSIYVYEIKNPNSIKKKCYGIDKYSDEMFI
>NZ_CP019870.1|WP_003439781.1|750664_751645_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MYKDYYIISNGDIKRKENTIYYYNLEGEKKILPVEQVDDIHIYGEVDLNTKLINYISKYGVMLHFYNYYGYYSGTYYPRKKNVSGFSLVCQSACYLDKNERLYLAKSFVESASYHILRNMRYYKVDESLIDTIKDELNDLNDVKEISELMGKEGRIRKTYYKSFNQILKDDFEFYKREKRPPKDPVNALMSFGNSIMYTNVLSEIYKTQLDPTISFLHEPSTKRFSLSLDIAEIFKPIIVDTIIFSLINNKRINKNDFEYQDKICYLSEKGKKKFLQEFENKMQTTIKHRNLNRKVSYRMFIRLECYKLIKHFINDERYKVLKVWW
>NZ_CP019870.1|WP_003439783.1|750110_750662_+|CRISPR-associated-protein-Cas4
MWLKFTKEGDFVPIDLEVLKVQGVKINYYYVCKRKLWLFSKGITMEQNSSRVLSGKIVHEDSYKRMKNKEILIDDILKLDIIKDEYVKEVKISSKMKEADEMQLYYYLYYLKNSMGIEKKGTINYVKEKKQEELILTEEKERIIENTLININEINMQLSPSKIEKKHYCTKCAYYEFCFVKEE
>NZ_CP019870.1|WP_003439784.1|747774_750096_+|CRISPR-associated-helicase/endonuclease-Cas3
MLYAKSNPVETLREHTDELLKQMNVLRESYGKNINSLDFLEEEIFWQLLDLVIEFHDIGKAFSPFQELIKSRMDTKINEPKIVTHLENNVGHNYLSPAFIDYSYIDRKKNKELRAVLNQVIVYHHERDIFIDKDFKNLIQKILDEDLINKVYELQHEFKVRYPIKTERLSKVYLQSVEKRIDKNHKYYNLYIMLKGILHRLDHSASAHEVVECNNVINIGEQTENYLMKEFGSLREAQSFAKSNRNKNIILIASTGMGKTETALIWIDKDKAFFTLPLRVSINALFDRAKNIVGVGESNDTFLGLLHSTAIDYLEESNQENSSEIVDLAKLLSCKLTFSTIDQIFKFPFLYRGYEKVYSTLAYSKVVIDEIQAYSPEIAAVLVKGIEMIHKIGGRFMIMTATMPTIYIDELKKRGVMNSNLAELTCNTEKIRHCVSIVENSIDENLGKIIQSGMNKKVLVIVNTVKSAVEKYELIEEIVKPKGIDVNLNLLHSMYIQEDRAKLEKYIKEFANSDRNGIWITTQLVEASLDIDFDELHTENSTLDSLFQRFGRCYRSREYEENSPNIFIYTEKATGIGSIYDKDIVEKGLELLKTFINGKECVKMKEKYKVEMVKILYSKESLEGTAFEKRFTSALNILDTITPYSLGSKDAQNILRNIEGYTVIPEDIYNKIEETLIKDYEELGQELINAYSNDDRQLINKIKSKRKKARREIIKKTVNLPIYKAKQNVIDIQVKGLEDLKILLYKYDIYENKHTKQIFGKGVLISNEIDQFI
>NZ_CP019870.1|WP_003439785.1|747062_747764_+|type-I-B-CRISPR-associated-protein-Cas5
MKVLKLDLFQETACYKKPFAMKITETYPLPPYSTINGLIHKILNATEYIPFNISVQGTYESIFNNYQTTYFYKKDSITSMPMNSHMLLNVNLIIHIGGDFDLLEEIYDSLLNYDEHLSLGRKEDLVRINDIRFVEVNKFEVDEDIQLDDYENYKLSECNIRMPIYIPKTSLQDTDIDGISYRLNNYYDNNAVEDKKRVWNKVDSYYVEDGNTISIGDILLDNEGDLLYFNNIN
>NZ_CP019870.1|WP_021369122.1|746146_747061_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKRGLTFTVIAQAQSLNYGEGIGNISELKKLSRDDGNIYTFASRQCLRYDIVRLAAELFNWNLQVVDKEKGTIQFKDNISIRESEEMDLFGYMKTNKKDEKDKKGGSLTREATVRLSNAISLEPYRSDMDFLNNKGFADRIGEHPNLANIEQHLSYYTYTVTIDLSKIGKDGEIELDNKEKCRRVVEFLEIIKVLNRNIRGRQENLSPLFVVGGVYEIANPFFLGRIKLKGDKNGFKINKQAIEEVIQGTFLGKDLKEFTYVGMVDGVFINKEEFKGLFEDNFFSVDKFFGQLVKEVKEYYGVN
>NZ_CP019870.1|WP_003439787.1|744267_746145_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MKLRVYRGDWFFNMGIVGFLNIIKKADKQAEIFIMEDYIEFDSLFLENFHEYYFNYFMDEYDVSKRIKKNIDYSINFIKSKPDRIKDGIKKIKDSVKQQNDKIKKFDEEKFNLIKEKLDSMSKIKSYDEFDSLEALVDETIDIFKIKSINDRLTANLYKYVVQDNYFGQVSFFNVAKAKLDLDGLKQVMFNDYLRQIIYFGELEDLLEENDYDKLKNYLNDRLNSIAKDINEKKVSKSSINTIEKIMKEINKNFIKKNKSIEDIKKYMDSLEVCEMCGLYKGILDEYSESNFAPLGVSTNNARNMFWNQAYVPSICDICKLILFCTPAGATYTRKNYLINEENEFYLFVNMDTCINELFERNNSLKAQKSEYSDSKEENPFNQLIKSIVEENTLKSEWQLRNILFVEFKASIDSKKCKINYFNIPTYLAKFFTDKYANKKIQSIYDYKLKSNVLDLLLKNRDLKHLINNILRNKVKNDMESNNKSNISGIDCFRVVQLRALINSYKKGVYKMDSKNLEKNDEKLRIIYYLGCDIHDYFVNKNSKNKIGGVSYKLLNSVKVGNKSDFMDTIIRVFMSAEKQMPAFILDIEIEKDLDFESIGHAFISGLISGKYEGKDKLPNEKEEK
>NZ_CP019870.1|WP_003439788.1|743524_744262_+|CRISPR-associated-endoribonuclease-Cas6
MKMKIEFSTGCIPISYNSLFMSIIKEAIRKSNEDYYKNMYYYKEKNNKKTKNFTFSVYIKKYSIEGDNFIIEDKVILNISTPDLELGFHIYNGLMTSKKCLYKDYELTRIRIDLSREKKVTEERVLFNALSPICVKSKEGKFLEITDDRYIEELNYITNEVVKNYRGNGLKRKLEFENIGLKKVVVKESLREFKKITGKEYQYINGYKGKFILKGDIDDLNLIYNLGIGFRRAQGFGDVDILEWR
>NZ_CP019870.1|WP_003439791.1|742529_743447_+|WYL-domain-containing-protein
MMILIQSRGKMKCKELSEELEVSERQIKSYKMYLEQAGIFINSTPGIYGGYEIDKCNSISLIKLLDSEVSILDMINSQLEYNNDIYKNEFNNIVEKIKAVLNTGEKSDTYMDYFTVQAQCNCDYESEKNKCNEIIRAYTTKHKFWIEYYSLNSGNSERIVHPYGLFNYKSDTYMVAFCEKRFKFIDFKLCRIKDYKVLEEKYNVDKSFSWDEYSKNSIGIYKGEEISVVIKISHPFSTIIKEKVWVNNQQIIEYDDKSIMFKAKMRGYEEIKSWILSMGAYVEVVEPDRLRNDILLEIEKMKKIY
>NZ_CP019870.1|WP_003439793.1|740334_742251_+|ABC-transporter-permease
MNIKQFAINNISRNIKAYLGYLASIVISSSLLFSFIMFTSHPDLDVSQFPDYLKEGLKMSKIIAYLFLFFFVFYSVSVFLKSRYKEFGILYITGISKRQVMKLIFIENMIINIVSSVIGIIIGLIFAKIFLVVMSTFLELSPLKFYIPFNAILSTLIYFMILAVLTSIFTSFIVKENQVLKLLKGTKTPKPEPKTSLMLAILSICLFIIAYYNAITSTDQYTTYLRLVPVTSLTIVATYLFFSQFSVFFMKKLKLNKRFYRKNTNMLWISNLIYKVKDNARIFFLITITSAVAFTAIGTVYSFWKDVERQINLIYPNTIYYSTMTLHNDPKKPDSKEKDKERMMFIENNLKKENVDYTRTNGEFKTVFPKKSDFNVRIMKESKYLEITETIGVKPISFEDNECISLLSSSLPGNKNIKENIIVGNRGLKVAKQVEECVMPAYYKNMYVVKDNFYDSIESKFIVDRFTAFEVEDSSKTIEICRKFENKFNNESGMQPYLFFSKELMIGTGKLMYSTFIFLAIFIGLIFFVTTSSFLYNKFYMDCQVDKKKYEQLNKLGMTYNEIKKASTIEIGIVFLFPYVVAVIHSIFALTALKNSFDIEVASSAVLVMGSLFLVQIVYFLIVRNNYLKEIRLNLVNF
>NZ_CP019870.1|WP_003439776.1|754087_754516_+|N-acetyltransferase
MIKKLNNKDINKIMEIWEKSTIKAHDFISKEYWQNNYNTVKNEYIPISDTFVYDDGDEIKGFISIIDKSFIGALFIKPKYQNLGIGGKLLDYATKKYKSLSLAVYKDNKKAVVFYNKKGFNIVKEQVNEDSGFKEYIMEYSK
>NZ_CP019870.1|WP_003439775.1|754970_755750_-|hypothetical-protein
MKVNENNINNIDEELGELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDLNMPSKNKKYTNIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDELNCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDITYKFSSKEAEPIEMCSEVSSIRCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSYCCGNCDSEISLSQREHFKI
>NZ_CP019870.1|WP_009891255.1|756073_756619_+|biotin-transporter-BioY
MKNTKVNIQDLTKMSICVALLCISSYIYIPLPFTPAGVTAQTIMINLIALILTPRQAFSTVGVYIMIGLIGIPVFGGGTSGIGKLLSPTGGFYFGFLFAALIISLLKGRNNDIKRYILITIFVGMPIIYFMGTVFMCYFNQMTVEAALFAAVVPFLIGDTIKSVIASFLGTKLNNVLRRNL
>NZ_CP019870.1|WP_021369117.1|756650_757787_+|thiolase-family-protein
MKEVFILGGLRSHIGLKNGIFQFVQPELLGASVLKDLIKKYEIDKIDEIICGNAVGTGGNIARLMTLTAGVSNEVPAFTVDMQCASAMMSIDIAFSKVKSGQCDLIIAGGFESSSLQPMRTYHKNDKRYDTNNPNYTVAQFSPDDNSQNSMLEGAERVAELYQIEKADLDFWVKESHKRAKEAREEKILEDIISPINNSTYDEGIRDKMSQRLLDRMPSILGKETITNAANSCLINDGASFIIICSKKYLEHVKKKPKAKIINTCTIGTDATLSPTSAIQAMDKLLEIESLNYLDVSAVEFNEAFAVIDVLFQRKYPELIDRYNIFGGALAYGHPYGASGAIIALHLLKALEKTKGRYGICSIAAAGGLGSALLLERV
>NZ_CP019870.1|WP_003439771.1|757790_759182_+|AMP-binding-protein
MNYYELLRIKKERQKNKNFLIIDGEKYTYENILSYSEELGKQISLGENIPILIYSKNIMFQLISFFAINYSKNIPIICHYNLSKKVLDDILLKNNISIIISDESMDVIDLYDDNNNEVAKKVNFSIFNPKFNIYMYQYKKLINYLDKSICMGALSSGSTSVPKVLYRTYESWAGFFPIQNGIFNISGESILFVNGTLSFTGNLNSIMSVLYEGGSIVISSGLNCKSWIRTIKQYNVTNIYLIPTKLQLLVKHLKEPVLKVVSIFTGSQLLFEDTARNLKKYMPKSEIILYYGASELNYITYLCYDELIEKPLSVGRPFPGIDIYIREGKIFVNTEYAVYNATKPYSVNDIGYYDNDGYLIFEGRSDDIINIGGFKVSSTKIENEVKKIPQIEDAIVLPYSDTIRGNQIVLFVITIDKITKKDLLIKMKDNLMKNEIPKKIIFLNSFPYTSSEKIDRLALLKML
>NZ_CP019870.1|WP_003439770.1|759257_760133_+|dipicolinate-synthase-subunit-DpsA
MSNQYDITVIGGDLRQVYMVKKLINKGYSVVTYGISNEIINGIVGKSTSLAEALSKSSIILCPIPFTKNQVNIENTDDCLDATIDNLLINLSPNQILFGGNIPTKVCKFCEQHSIQIYDFMKMNDVAILNAVATAEGAIAEAIKRSIINIHQSNCLVLGYGRCAQILAKKLYALDANVCVGARNNDARSTANAFGYSSISLSQLDEKLLQFDYIFNTIPECILTKERLEKVSQEVTIIDIASSPGGVDYSVVKEAGINATLCLGLPGKYSPKTSGEILVNAIENIINERRD
>NZ_CP019870.1|WP_003429956.1|760135_760726_+|dipicolinate-synthase-subunit-B
MRLEGLTIGVGFTGSFCTYDKIFIELENLVKEGANVHTIFSDVSQNIDCRFGNSEEFMKKAYELTGNKPIVTIEEAEPFGPKGIADIIIIAPCTGNTAAKLANGITDSPVLMAAKGHLRNDKPLVISISTNDALSFNFKNIGILLNSKNIYFVPFGQDNCKAKPNSMIAHTELIIPTIELALENKQLQPVIKSPHQ
>NZ_CP019870.1|WP_021364737.1|760932_761133_-|hypothetical-protein
MEKLKTISVFSLIISVILTIGGIGIVTYYVDNLFIRGLSVFVLIMSSSFVSTTVRLIFEESKRYKF
>NZ_CP019870.1|WP_003439759.1|761636_764291_+|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAHKEQVIIENKKENEVMSVGLDTVNNVESLVKKLAKIREAQKIFATYSQEQVDKIFLAASLAANKQRVPLAIMAQKETGMGIAEDKVIKNHYASEYIYNAYKETKTCGVIEKDEAFGMTKIAEPIGVIAAVVPTTNPTSTAIFKALLALKTRNGIIFSPHPRAKNSTIEAAKVVLEAAVLAGAPEGIIGWIDEPSLELTTTVMKEVDLTLATGGPGMVKSAYSSGKPAIGVGAGNTPAIIDDSADIKTAVNSILVSKTFDNGMICASEQSVIVLENIYNEVKKEFKERGAYLLDKDETEKIRNIILVNGGLNSKIVGQTACTIAKLAGFEVPVDTKVLIGEVESVEIEEAFAHEKLSPVLAMYKASDFDDAVRKAEKLVEDGGFGHTSSLYIDDVNQREKLDKFTSAMKTCRILINTPSSQGGIGDLYNFKLAPSLTLGCGSWGGNSVSENVGVKHLLNIKTVAERRENMLWFRAPEKVYFKKGCLGVALKELKDVMNKKRAFIVTDTFLYNNGYTKAVTDLLDEMNIKYTTFFEVEPDPTLECAKIGAKAMREFNPDVIISIGGGSAMDAGKIMWTLYEHPDVDFQDLAMRFMDIRKRVYTFPKMGEKANFVAIPTSAGTGSEVTPFAVITDQDTGVKYPLADYELMPNMAIVDSDMMMNMPKSLTSASGIDALTHALEAYVSMLATDYTNGLALQAIKSIFEYLPRAYDNGAKDPEAREKMANASTMAGMAFANAFLGVCHSMAHKLGAFHHVPHGVANALLITEVMKFNSSDAPKKMGAFSQYKYPEALKRYAEIASFLGLKGNSDEEKFQSLLVAIEDLKLKVGIPKSIKEFGVEESKFMDSIDEMVIQAFDDQCTGANPRYPLMNEIKDMYLNSYYGR
>NZ_CP019870.1|WP_078051018.1|764566_766786_+|EAL-domain-containing-protein
MTGRNKSFTLITILFLTSLFLTMGYIYIEDTKHLLMSEAKIHIKEVAVQGSQLAQRQIEKDLDVLNIFSNYYASNPDIPNEEKMKNILDEMENQKFYTMAIVDINGNAENTKGDKFSVKDREFFKNSIKGKKYVSSPYVDEVNKSIKKIAISVPLLNNDKVVGVLYCTYNINTLMKLINISFYENNSISYVVKNNGTIILHPQGDSLSKNIYKLLKQDNDIQEVNRLKKELQENKTGATVLNMLEERRYLGYATMDNGNSENNYIKDWNLIFSIPETVVFSNSKQIINRAVYAVLSIVLIFIAIIFYIIYIKKSNEKEILSLAYEDKVTYIGNQNKFYRECSKYLLDKPSLNYIIVYFDINNFKMINDTFGYEFGDNLLITIAKALKEELTEGEVYARLSSDYFAIFCDYKNGRNKIIRKLDNIRSNIESNLSIVFEISLCVGIYFVEEGEVDIQKAVNKANMARSVAKGKNINYAIYNEDVRNKLSEESMILDDIKIALVKNQFEVYYQPKFSLVTGEMIGSEALIRWNHPEHGFISPAVFIPIAEKSKLILKIGRFVFERVCNDLYEWKKQGKKIVPVSVNLSRVELYQPDIVKFINKTIKMYNLSSDFIEIEITETVAINELNILKNVLNELRTYGFSISMDDFGTGYSSISCLRDMPIDILKLDKSFLGGIEHDERSRNIAKSIVSLAKSLDLVVIIEGVESKEQAELMKQFGCDLVQGFYFARPMPAKNFLDLL

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Crispr_ID: NZ_CP019870_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_2

752098-753899

Unclear

I-A

Consensus_repeat	Method
GTTTTATATTAACTAAGTGGTATGTAAAT	PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAT	CRISPRCasFinder
GTTTTATATTAACTAAGTGGTATGTAAAT	CRT

27 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

The CRISPR arrays of NZ_CP019870_2

>merge|NZ_CP019870|2|752098-753899|PILER-CR,CRISPRCasFinder,CRT
GTTTTATATTAACTAAGTGGTATGTAAATTGGAAAACTTGTCAAAAATAGCATCAAAGCATTTATAGTTTTATATTAACTAAGTGGTATGTAAATGGGGCTTTTGGGGACATGAGTGTTACAGATGCACTAAGTTTTATATTAACTAAGTGGTATGTAAATAGCCCCCTAATGCTGGAACAGTGAGGACACACAAACGTTTTATATTAACTAAGTGGTATGTAAATGAACTTTTAAAAGATTATGCTAGGAAAATTCATGTTGCTGGTTTTATATTAACTAAGTGGTATGTAAATAAGCCAAAAGCTACGAATTTGAACTAAAATGCGTGGGTTTTATATTAACTAAGTGGTATGTAAATTGCCTAGGGAACCCCTCCAGCCCCTAACCATGCAACAGTTTTATATTAACTAAGTGGTATGTAAATAACAAGAAAAACCAACAACAAAACCAACAACAAAAAGGTTTTATATTAACTAAGTGGTATGTAAATCTTTCCATAAAATACCCCCTACTTCATTTTTATTTAGTTTTATATTAACTAAGTGGTATGTAAATAAGACCAAGCCACTTCCGCAATTGCATCTTCTAACATGTTTTATATTAACTAAGTGGTATGTAAATAAATATTTTGTTGACTTATTTCAAACTTTAGAGGACGTTTTATATTAACTAAGTGGTATGTAAATAGTGTATTTTTATCATTCTATCTACTATACCAAAAAAGTTTTATATTAACTAAGTGGTATGTAAATGCATACCTGTAACCTGCATCATTTTGTATCTATCTTGTTTTATATTAACTAAGTGGTATGTAAATAAAAGATTGTAATGAGTACGAGACAAGATTTATTGTGTTTTATATTAACTAAGTGGTATGTAAATTATATAAATTTTCTTTTTCTTCTATTTCTAAGTTCAGTTTTATATTAACTAAGTGGTATGTAAATGTTGTATAGCTAGTACTTCCTGCTTTAAATCCTTTTCGTTTTATATTAACTAAGTGGTATGTAAATAAGACAAGGTTCTTCTTTTAAGTGGCAAGCTATAAAAGTTTTATATTAACTAAGTGGTATGTAAATCGAGTAAAATAACAATTATCTGGAATGTGAGAAGTTGTTTTATATTAACTAAGTGGTATGTAAATTACACATAATTACAACCCAGTTTACTTTTTGCTACACGTTTTATATTAACTAAGTGGTATGTAAATTATGAATATATTACATAATCATAAAGATTTACAAATGGTTTTATATTAACTAAGTGGTATGTAAATTCTCTAAATCCATCTATAACGTTACCAGCAAAATCAATTTTATATTAACTAAGTGGTATGTAAATAAGAACTTTTCATGAACGTGGAAAATATTGAGTTCAGTTTTATATTAACTAAGTGGTATGTAAATTTGTCATTTACGACTACCATTTCTCTAGCATTTATATGTTTTATATTAACTAAGTGGTATGTAAATGGGAAAATATGGGAAAAGTTAACTAATATAATGCAAAGTTTTATATTAACTAAGTGGTATGTAAATGAAATTTTTAGTGCTATTGCAACTACTCTTGTTTGTGTTTTATATTAACTAAGTGGTATGTAAATGCATAACCAAAAACTTCAAAATCAAGACCTCGAATTTGTTTTATATTAACTAAGTGGTATGTAAATTGCGCAATAACATGCTGAAAACTGCAATTTCGAAGTGTTTTATATTAACTAAGTGGTATGTAAATAGGATAAAGAAAAGACTCACACAAGGCACAGTGTCAGGTTTTATATCAACTAAGGGTAGATAAGTA

>NZ_CP019870|2|1|752098-753833|PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAT	TGGAAAACTTGTCAAAAATAGCATCAAAGCATTTATA
GTTTTATATTAACTAAGTGGTATGTAAAT	GGGGCTTTTGGGGACATGAGTGTTACAGATGCACTAA
GTTTTATATTAACTAAGTGGTATGTAAAT	AGCCCCCTAATGCTGGAACAGTGAGGACACACAAAC
GTTTTATATTAACTAAGTGGTATGTAAAT	GAACTTTTAAAAGATTATGCTAGGAAAATTCATGTTGCTG
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGCCAAAAGCTACGAATTTGAACTAAAATGCGTGG
GTTTTATATTAACTAAGTGGTATGTAAAT	TGCCTAGGGAACCCCTCCAGCCCCTAACCATGCAACA
GTTTTATATTAACTAAGTGGTATGTAAAT	AACAAGAAAAACCAACAACAAAACCAACAACAAAAAG
GTTTTATATTAACTAAGTGGTATGTAAAT	CTTTCCATAAAATACCCCCTACTTCATTTTTATTTA
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGACCAAGCCACTTCCGCAATTGCATCTTCTAACAT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAATATTTTGTTGACTTATTTCAAACTTTAGAGGAC
GTTTTATATTAACTAAGTGGTATGTAAAT	AGTGTATTTTTATCATTCTATCTACTATACCAAAAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	GCATACCTGTAACCTGCATCATTTTGTATCTATCTT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAAAGATTGTAATGAGTACGAGACAAGATTTATTGT
GTTTTATATTAACTAAGTGGTATGTAAAT	TATATAAATTTTCTTTTTCTTCTATTTCTAAGTTCA
GTTTTATATTAACTAAGTGGTATGTAAAT	GTTGTATAGCTAGTACTTCCTGCTTTAAATCCTTTTC
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGACAAGGTTCTTCTTTTAAGTGGCAAGCTATAAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	CGAGTAAAATAACAATTATCTGGAATGTGAGAAGTT
GTTTTATATTAACTAAGTGGTATGTAAAT	TACACATAATTACAACCCAGTTTACTTTTTGCTACAC
GTTTTATATTAACTAAGTGGTATGTAAAT	TATGAATATATTACATAATCATAAAGATTTACAAATG
GTTTTATATTAACTAAGTGGTATGTAAAT	TCTCTAAATCCATCTATAACGTTACCAGCAAAATCA
ATTTTATATTAACTAAGTGGTATGTAAAT	AAGAACTTTTCATGAACGTGGAAAATATTGAGTTCA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTGTCATTTACGACTACCATTTCTCTAGCATTTATAT
GTTTTATATTAACTAAGTGGTATGTAAAT	GGGAAAATATGGGAAAAGTTAACTAATATAATGCAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	GAAATTTTTAGTGCTATTGCAACTACTCTTGTTTGT
GTTTTATATTAACTAAGTGGTATGTAAAT	GCATAACCAAAAACTTCAAAATCAAGACCTCGAATTT
GTTTTATATTAACTAAGTGGTATGTAAAT	TGCGCAATAACATGCTGAAAACTGCAATTTCGAAGT
GTTTTATATTAACTAAGTGGTATGTAAAT

>NZ_CP019870|2|1|752098-753834|CRISPRCasFinder
GTTTTATATTAACTAAGTGGTATGTAAAT	TGGAAAACTTGTCAAAAATAGCATCAAAGCATTTATA
GTTTTATATTAACTAAGTGGTATGTAAAT	GGGGCTTTTGGGGACATGAGTGTTACAGATGCACTAA
GTTTTATATTAACTAAGTGGTATGTAAAT	AGCCCCCTAATGCTGGAACAGTGAGGACACACAAAC
GTTTTATATTAACTAAGTGGTATGTAAAT	GAACTTTTAAAAGATTATGCTAGGAAAATTCATGTTGCTG
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGCCAAAAGCTACGAATTTGAACTAAAATGCGTGG
GTTTTATATTAACTAAGTGGTATGTAAAT	TGCCTAGGGAACCCCTCCAGCCCCTAACCATGCAACA
GTTTTATATTAACTAAGTGGTATGTAAAT	AACAAGAAAAACCAACAACAAAACCAACAACAAAAAG
GTTTTATATTAACTAAGTGGTATGTAAAT	CTTTCCATAAAATACCCCCTACTTCATTTTTATTTA
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGACCAAGCCACTTCCGCAATTGCATCTTCTAACAT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAATATTTTGTTGACTTATTTCAAACTTTAGAGGAC
GTTTTATATTAACTAAGTGGTATGTAAAT	AGTGTATTTTTATCATTCTATCTACTATACCAAAAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	GCATACCTGTAACCTGCATCATTTTGTATCTATCTT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAAAGATTGTAATGAGTACGAGACAAGATTTATTGT
GTTTTATATTAACTAAGTGGTATGTAAAT	TATATAAATTTTCTTTTTCTTCTATTTCTAAGTTCA
GTTTTATATTAACTAAGTGGTATGTAAAT	GTTGTATAGCTAGTACTTCCTGCTTTAAATCCTTTTC
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGACAAGGTTCTTCTTTTAAGTGGCAAGCTATAAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	CGAGTAAAATAACAATTATCTGGAATGTGAGAAGTT
GTTTTATATTAACTAAGTGGTATGTAAAT	TACACATAATTACAACCCAGTTTACTTTTTGCTACAC
GTTTTATATTAACTAAGTGGTATGTAAAT	TATGAATATATTACATAATCATAAAGATTTACAAATG
GTTTTATATTAACTAAGTGGTATGTAAAT	TCTCTAAATCCATCTATAACGTTACCAGCAAAATCA
ATTTTATATTAACTAAGTGGTATGTAAAT	AAGAACTTTTCATGAACGTGGAAAATATTGAGTTCA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTGTCATTTACGACTACCATTTCTCTAGCATTTATAT
GTTTTATATTAACTAAGTGGTATGTAAAT	GGGAAAATATGGGAAAAGTTAACTAATATAATGCAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	GAAATTTTTAGTGCTATTGCAACTACTCTTGTTTGT
GTTTTATATTAACTAAGTGGTATGTAAAT	GCATAACCAAAAACTTCAAAATCAAGACCTCGAATTT
GTTTTATATTAACTAAGTGGTATGTAAAT	TGCGCAATAACATGCTGAAAACTGCAATTTCGAAGT
GTTTTATATTAACTAAGTGGTATGTAAATA

>NZ_CP019870|2|2|752098-753899|CRT
GTTTTATATTAACTAAGTGGTATGTAAAT	TGGAAAACTTGTCAAAAATAGCATCAAAGCATTTATA
GTTTTATATTAACTAAGTGGTATGTAAAT	GGGGCTTTTGGGGACATGAGTGTTACAGATGCACTAA
GTTTTATATTAACTAAGTGGTATGTAAAT	AGCCCCCTAATGCTGGAACAGTGAGGACACACAAAC
GTTTTATATTAACTAAGTGGTATGTAAAT	GAACTTTTAAAAGATTATGCTAGGAAAATTCATGTTGCTG
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGCCAAAAGCTACGAATTTGAACTAAAATGCGTGG
GTTTTATATTAACTAAGTGGTATGTAAAT	TGCCTAGGGAACCCCTCCAGCCCCTAACCATGCAACA
GTTTTATATTAACTAAGTGGTATGTAAAT	AACAAGAAAAACCAACAACAAAACCAACAACAAAAAG
GTTTTATATTAACTAAGTGGTATGTAAAT	CTTTCCATAAAATACCCCCTACTTCATTTTTATTTA
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGACCAAGCCACTTCCGCAATTGCATCTTCTAACAT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAATATTTTGTTGACTTATTTCAAACTTTAGAGGAC
GTTTTATATTAACTAAGTGGTATGTAAAT	AGTGTATTTTTATCATTCTATCTACTATACCAAAAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	GCATACCTGTAACCTGCATCATTTTGTATCTATCTT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAAAGATTGTAATGAGTACGAGACAAGATTTATTGT
GTTTTATATTAACTAAGTGGTATGTAAAT	TATATAAATTTTCTTTTTCTTCTATTTCTAAGTTCA
GTTTTATATTAACTAAGTGGTATGTAAAT	GTTGTATAGCTAGTACTTCCTGCTTTAAATCCTTTTC
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGACAAGGTTCTTCTTTTAAGTGGCAAGCTATAAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	CGAGTAAAATAACAATTATCTGGAATGTGAGAAGTT
GTTTTATATTAACTAAGTGGTATGTAAAT	TACACATAATTACAACCCAGTTTACTTTTTGCTACAC
GTTTTATATTAACTAAGTGGTATGTAAAT	TATGAATATATTACATAATCATAAAGATTTACAAATG
GTTTTATATTAACTAAGTGGTATGTAAAT	TCTCTAAATCCATCTATAACGTTACCAGCAAAATCA
ATTTTATATTAACTAAGTGGTATGTAAAT	AAGAACTTTTCATGAACGTGGAAAATATTGAGTTCA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTGTCATTTACGACTACCATTTCTCTAGCATTTATAT
GTTTTATATTAACTAAGTGGTATGTAAAT	GGGAAAATATGGGAAAAGTTAACTAATATAATGCAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	GAAATTTTTAGTGCTATTGCAACTACTCTTGTTTGT
GTTTTATATTAACTAAGTGGTATGTAAAT	GCATAACCAAAAACTTCAAAATCAAGACCTCGAATTT
GTTTTATATTAACTAAGTGGTATGTAAAT	TGCGCAATAACATGCTGAAAACTGCAATTTCGAAGT
GTTTTATATTAACTAAGTGGTATGTAAAT	AGGATAAAGAAAAGACTCACACAAGGCACAGTGTCAG
GTTTTATATCAACTAAGGGTAGATAAGTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_003439781.1\|750664_751645_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP019870.1\|WP_021369122.1\|746146_747061_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
NZ_CP019870.1\|WP_003439788.1\|743524_744262_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
NZ_CP019870.1\|WP_078051018.1\|764566_766786_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP019870.1\|WP_021369117.1\|756650_757787_+\|thiolase-family-protein	unknown	unknown	gnl\|CDD\|238383
NZ_CP019870.1\|WP_003439784.1\|747774_750096_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP019870.1\|WP_003439771.1\|757790_759182_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341288
NZ_CP019870.1\|WP_003439791.1\|742529_743447_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_CP019870.1\|WP_003439759.1\|761636_764291_+\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
NZ_CP019870.1\|WP_009891255.1\|756073_756619_+\|biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|376871
NZ_CP019870.1\|WP_003439787.1\|744267_746145_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
NZ_CP019870.1\|WP_003429956.1\|760135_760726_+\|dipicolinate-synthase-subunit-B	unknown	unknown	gnl\|CDD\|181370
NZ_CP019870.1\|WP_003439770.1\|759257_760133_+\|dipicolinate-synthase-subunit-DpsA	unknown	unknown	gnl\|CDD\|181371
NZ_CP019870.1\|WP_003439785.1\|747062_747764_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
NZ_CP019870.1\|WP_003439780.1\|751647_751914_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP019870.1\|WP_003439776.1\|754087_754516_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|236715
NZ_CP019870.1\|WP_021364737.1\|760932_761133_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003439793.1\|740334_742251_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376899
NZ_CP019870.1\|WP_003439775.1\|754970_755750_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003439783.1\|750110_750662_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_003439781.1\|750664_751645_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	9.94583e-175
NZ_CP019870.1\|WP_021369122.1\|746146_747061_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	3.12381e-53
NZ_CP019870.1\|WP_003439788.1\|743524_744262_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	1.2634e-19
NZ_CP019870.1\|WP_078051018.1\|764566_766786_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.80399e-106
NZ_CP019870.1\|WP_021369117.1\|756650_757787_+\|thiolase-family-protein	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	5.48992e-109
NZ_CP019870.1\|WP_003439784.1\|747774_750096_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	4.58131e-56
NZ_CP019870.1\|WP_003439771.1\|757790_759182_+\|AMP-binding-protein	gnl\|CDD\|341288	cd17633, AFD_YhfT-like, fatty acid-CoA ligase VraA. This family of acyl-CoA ligases includes Bacillus subtilis YhfT, as well as long-chain fatty acid-CoA ligase VraA, all of which are as yet to be characterized. These proteins belong to the adenylate-forming enzymes which catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain	1.85636e-145
NZ_CP019870.1\|WP_003439791.1\|742529_743447_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	6.49106e-40
NZ_CP019870.1\|WP_003439759.1\|761636_764291_+\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
NZ_CP019870.1\|WP_009891255.1\|756073_756619_+\|biotin-transporter-BioY	gnl\|CDD\|376871	pfam02632, BioY, BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.	2.43536e-36
NZ_CP019870.1\|WP_003439787.1\|744267_746145_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.7324e-23
NZ_CP019870.1\|WP_003429956.1\|760135_760726_+\|dipicolinate-synthase-subunit-B	gnl\|CDD\|181370	PRK08305, spoVFB, dipicolinate synthase subunit B; Reviewed.	6.40655e-126
NZ_CP019870.1\|WP_003439770.1\|759257_760133_+\|dipicolinate-synthase-subunit-DpsA	gnl\|CDD\|181371	PRK08306, PRK08306, dipicolinate synthase subunit DpsA.	7.8671e-132
NZ_CP019870.1\|WP_003439785.1\|747062_747764_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.28951e-66
NZ_CP019870.1\|WP_003439780.1\|751647_751914_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.64696e-28
NZ_CP019870.1\|WP_003439776.1\|754087_754516_+\|N-acetyltransferase	gnl\|CDD\|236715	PRK10562, PRK10562, putative acetyltransferase; Provisional.	8.2844e-47
NZ_CP019870.1\|WP_003439793.1\|740334_742251_+\|ABC-transporter-permease	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	4.37101e-09
NZ_CP019870.1\|WP_003439783.1\|750110_750662_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.80592e-59

>NZ_CP019870.1|WP_003439780.1|751647_751914_+|CRISPR-associated-endonuclease-Cas2
MFVIVTYDIVEARSLNRIRRILRKYLTWTQNSVFEGNITEGKLHKCISEIENIIDNSEDSIYVYEIKNPNSIKKKCYGIDKYSDEMFI
>NZ_CP019870.1|WP_003439781.1|750664_751645_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MYKDYYIISNGDIKRKENTIYYYNLEGEKKILPVEQVDDIHIYGEVDLNTKLINYISKYGVMLHFYNYYGYYSGTYYPRKKNVSGFSLVCQSACYLDKNERLYLAKSFVESASYHILRNMRYYKVDESLIDTIKDELNDLNDVKEISELMGKEGRIRKTYYKSFNQILKDDFEFYKREKRPPKDPVNALMSFGNSIMYTNVLSEIYKTQLDPTISFLHEPSTKRFSLSLDIAEIFKPIIVDTIIFSLINNKRINKNDFEYQDKICYLSEKGKKKFLQEFENKMQTTIKHRNLNRKVSYRMFIRLECYKLIKHFINDERYKVLKVWW
>NZ_CP019870.1|WP_003439783.1|750110_750662_+|CRISPR-associated-protein-Cas4
MWLKFTKEGDFVPIDLEVLKVQGVKINYYYVCKRKLWLFSKGITMEQNSSRVLSGKIVHEDSYKRMKNKEILIDDILKLDIIKDEYVKEVKISSKMKEADEMQLYYYLYYLKNSMGIEKKGTINYVKEKKQEELILTEEKERIIENTLININEINMQLSPSKIEKKHYCTKCAYYEFCFVKEE
>NZ_CP019870.1|WP_003439784.1|747774_750096_+|CRISPR-associated-helicase/endonuclease-Cas3
MLYAKSNPVETLREHTDELLKQMNVLRESYGKNINSLDFLEEEIFWQLLDLVIEFHDIGKAFSPFQELIKSRMDTKINEPKIVTHLENNVGHNYLSPAFIDYSYIDRKKNKELRAVLNQVIVYHHERDIFIDKDFKNLIQKILDEDLINKVYELQHEFKVRYPIKTERLSKVYLQSVEKRIDKNHKYYNLYIMLKGILHRLDHSASAHEVVECNNVINIGEQTENYLMKEFGSLREAQSFAKSNRNKNIILIASTGMGKTETALIWIDKDKAFFTLPLRVSINALFDRAKNIVGVGESNDTFLGLLHSTAIDYLEESNQENSSEIVDLAKLLSCKLTFSTIDQIFKFPFLYRGYEKVYSTLAYSKVVIDEIQAYSPEIAAVLVKGIEMIHKIGGRFMIMTATMPTIYIDELKKRGVMNSNLAELTCNTEKIRHCVSIVENSIDENLGKIIQSGMNKKVLVIVNTVKSAVEKYELIEEIVKPKGIDVNLNLLHSMYIQEDRAKLEKYIKEFANSDRNGIWITTQLVEASLDIDFDELHTENSTLDSLFQRFGRCYRSREYEENSPNIFIYTEKATGIGSIYDKDIVEKGLELLKTFINGKECVKMKEKYKVEMVKILYSKESLEGTAFEKRFTSALNILDTITPYSLGSKDAQNILRNIEGYTVIPEDIYNKIEETLIKDYEELGQELINAYSNDDRQLINKIKSKRKKARREIIKKTVNLPIYKAKQNVIDIQVKGLEDLKILLYKYDIYENKHTKQIFGKGVLISNEIDQFI
>NZ_CP019870.1|WP_003439785.1|747062_747764_+|type-I-B-CRISPR-associated-protein-Cas5
MKVLKLDLFQETACYKKPFAMKITETYPLPPYSTINGLIHKILNATEYIPFNISVQGTYESIFNNYQTTYFYKKDSITSMPMNSHMLLNVNLIIHIGGDFDLLEEIYDSLLNYDEHLSLGRKEDLVRINDIRFVEVNKFEVDEDIQLDDYENYKLSECNIRMPIYIPKTSLQDTDIDGISYRLNNYYDNNAVEDKKRVWNKVDSYYVEDGNTISIGDILLDNEGDLLYFNNIN
>NZ_CP019870.1|WP_021369122.1|746146_747061_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKRGLTFTVIAQAQSLNYGEGIGNISELKKLSRDDGNIYTFASRQCLRYDIVRLAAELFNWNLQVVDKEKGTIQFKDNISIRESEEMDLFGYMKTNKKDEKDKKGGSLTREATVRLSNAISLEPYRSDMDFLNNKGFADRIGEHPNLANIEQHLSYYTYTVTIDLSKIGKDGEIELDNKEKCRRVVEFLEIIKVLNRNIRGRQENLSPLFVVGGVYEIANPFFLGRIKLKGDKNGFKINKQAIEEVIQGTFLGKDLKEFTYVGMVDGVFINKEEFKGLFEDNFFSVDKFFGQLVKEVKEYYGVN
>NZ_CP019870.1|WP_003439787.1|744267_746145_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MKLRVYRGDWFFNMGIVGFLNIIKKADKQAEIFIMEDYIEFDSLFLENFHEYYFNYFMDEYDVSKRIKKNIDYSINFIKSKPDRIKDGIKKIKDSVKQQNDKIKKFDEEKFNLIKEKLDSMSKIKSYDEFDSLEALVDETIDIFKIKSINDRLTANLYKYVVQDNYFGQVSFFNVAKAKLDLDGLKQVMFNDYLRQIIYFGELEDLLEENDYDKLKNYLNDRLNSIAKDINEKKVSKSSINTIEKIMKEINKNFIKKNKSIEDIKKYMDSLEVCEMCGLYKGILDEYSESNFAPLGVSTNNARNMFWNQAYVPSICDICKLILFCTPAGATYTRKNYLINEENEFYLFVNMDTCINELFERNNSLKAQKSEYSDSKEENPFNQLIKSIVEENTLKSEWQLRNILFVEFKASIDSKKCKINYFNIPTYLAKFFTDKYANKKIQSIYDYKLKSNVLDLLLKNRDLKHLINNILRNKVKNDMESNNKSNISGIDCFRVVQLRALINSYKKGVYKMDSKNLEKNDEKLRIIYYLGCDIHDYFVNKNSKNKIGGVSYKLLNSVKVGNKSDFMDTIIRVFMSAEKQMPAFILDIEIEKDLDFESIGHAFISGLISGKYEGKDKLPNEKEEK
>NZ_CP019870.1|WP_003439788.1|743524_744262_+|CRISPR-associated-endoribonuclease-Cas6
MKMKIEFSTGCIPISYNSLFMSIIKEAIRKSNEDYYKNMYYYKEKNNKKTKNFTFSVYIKKYSIEGDNFIIEDKVILNISTPDLELGFHIYNGLMTSKKCLYKDYELTRIRIDLSREKKVTEERVLFNALSPICVKSKEGKFLEITDDRYIEELNYITNEVVKNYRGNGLKRKLEFENIGLKKVVVKESLREFKKITGKEYQYINGYKGKFILKGDIDDLNLIYNLGIGFRRAQGFGDVDILEWR
>NZ_CP019870.1|WP_003439791.1|742529_743447_+|WYL-domain-containing-protein
MMILIQSRGKMKCKELSEELEVSERQIKSYKMYLEQAGIFINSTPGIYGGYEIDKCNSISLIKLLDSEVSILDMINSQLEYNNDIYKNEFNNIVEKIKAVLNTGEKSDTYMDYFTVQAQCNCDYESEKNKCNEIIRAYTTKHKFWIEYYSLNSGNSERIVHPYGLFNYKSDTYMVAFCEKRFKFIDFKLCRIKDYKVLEEKYNVDKSFSWDEYSKNSIGIYKGEEISVVIKISHPFSTIIKEKVWVNNQQIIEYDDKSIMFKAKMRGYEEIKSWILSMGAYVEVVEPDRLRNDILLEIEKMKKIY
>NZ_CP019870.1|WP_003439793.1|740334_742251_+|ABC-transporter-permease
MNIKQFAINNISRNIKAYLGYLASIVISSSLLFSFIMFTSHPDLDVSQFPDYLKEGLKMSKIIAYLFLFFFVFYSVSVFLKSRYKEFGILYITGISKRQVMKLIFIENMIINIVSSVIGIIIGLIFAKIFLVVMSTFLELSPLKFYIPFNAILSTLIYFMILAVLTSIFTSFIVKENQVLKLLKGTKTPKPEPKTSLMLAILSICLFIIAYYNAITSTDQYTTYLRLVPVTSLTIVATYLFFSQFSVFFMKKLKLNKRFYRKNTNMLWISNLIYKVKDNARIFFLITITSAVAFTAIGTVYSFWKDVERQINLIYPNTIYYSTMTLHNDPKKPDSKEKDKERMMFIENNLKKENVDYTRTNGEFKTVFPKKSDFNVRIMKESKYLEITETIGVKPISFEDNECISLLSSSLPGNKNIKENIIVGNRGLKVAKQVEECVMPAYYKNMYVVKDNFYDSIESKFIVDRFTAFEVEDSSKTIEICRKFENKFNNESGMQPYLFFSKELMIGTGKLMYSTFIFLAIFIGLIFFVTTSSFLYNKFYMDCQVDKKKYEQLNKLGMTYNEIKKASTIEIGIVFLFPYVVAVIHSIFALTALKNSFDIEVASSAVLVMGSLFLVQIVYFLIVRNNYLKEIRLNLVNF
>NZ_CP019870.1|WP_003439776.1|754087_754516_+|N-acetyltransferase
MIKKLNNKDINKIMEIWEKSTIKAHDFISKEYWQNNYNTVKNEYIPISDTFVYDDGDEIKGFISIIDKSFIGALFIKPKYQNLGIGGKLLDYATKKYKSLSLAVYKDNKKAVVFYNKKGFNIVKEQVNEDSGFKEYIMEYSK
>NZ_CP019870.1|WP_003439775.1|754970_755750_-|hypothetical-protein
MKVNENNINNIDEELGELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDLNMPSKNKKYTNIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDELNCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDITYKFSSKEAEPIEMCSEVSSIRCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSYCCGNCDSEISLSQREHFKI
>NZ_CP019870.1|WP_009891255.1|756073_756619_+|biotin-transporter-BioY
MKNTKVNIQDLTKMSICVALLCISSYIYIPLPFTPAGVTAQTIMINLIALILTPRQAFSTVGVYIMIGLIGIPVFGGGTSGIGKLLSPTGGFYFGFLFAALIISLLKGRNNDIKRYILITIFVGMPIIYFMGTVFMCYFNQMTVEAALFAAVVPFLIGDTIKSVIASFLGTKLNNVLRRNL
>NZ_CP019870.1|WP_021369117.1|756650_757787_+|thiolase-family-protein
MKEVFILGGLRSHIGLKNGIFQFVQPELLGASVLKDLIKKYEIDKIDEIICGNAVGTGGNIARLMTLTAGVSNEVPAFTVDMQCASAMMSIDIAFSKVKSGQCDLIIAGGFESSSLQPMRTYHKNDKRYDTNNPNYTVAQFSPDDNSQNSMLEGAERVAELYQIEKADLDFWVKESHKRAKEAREEKILEDIISPINNSTYDEGIRDKMSQRLLDRMPSILGKETITNAANSCLINDGASFIIICSKKYLEHVKKKPKAKIINTCTIGTDATLSPTSAIQAMDKLLEIESLNYLDVSAVEFNEAFAVIDVLFQRKYPELIDRYNIFGGALAYGHPYGASGAIIALHLLKALEKTKGRYGICSIAAAGGLGSALLLERV
>NZ_CP019870.1|WP_003439771.1|757790_759182_+|AMP-binding-protein
MNYYELLRIKKERQKNKNFLIIDGEKYTYENILSYSEELGKQISLGENIPILIYSKNIMFQLISFFAINYSKNIPIICHYNLSKKVLDDILLKNNISIIISDESMDVIDLYDDNNNEVAKKVNFSIFNPKFNIYMYQYKKLINYLDKSICMGALSSGSTSVPKVLYRTYESWAGFFPIQNGIFNISGESILFVNGTLSFTGNLNSIMSVLYEGGSIVISSGLNCKSWIRTIKQYNVTNIYLIPTKLQLLVKHLKEPVLKVVSIFTGSQLLFEDTARNLKKYMPKSEIILYYGASELNYITYLCYDELIEKPLSVGRPFPGIDIYIREGKIFVNTEYAVYNATKPYSVNDIGYYDNDGYLIFEGRSDDIINIGGFKVSSTKIENEVKKIPQIEDAIVLPYSDTIRGNQIVLFVITIDKITKKDLLIKMKDNLMKNEIPKKIIFLNSFPYTSSEKIDRLALLKML
>NZ_CP019870.1|WP_003439770.1|759257_760133_+|dipicolinate-synthase-subunit-DpsA
MSNQYDITVIGGDLRQVYMVKKLINKGYSVVTYGISNEIINGIVGKSTSLAEALSKSSIILCPIPFTKNQVNIENTDDCLDATIDNLLINLSPNQILFGGNIPTKVCKFCEQHSIQIYDFMKMNDVAILNAVATAEGAIAEAIKRSIINIHQSNCLVLGYGRCAQILAKKLYALDANVCVGARNNDARSTANAFGYSSISLSQLDEKLLQFDYIFNTIPECILTKERLEKVSQEVTIIDIASSPGGVDYSVVKEAGINATLCLGLPGKYSPKTSGEILVNAIENIINERRD
>NZ_CP019870.1|WP_003429956.1|760135_760726_+|dipicolinate-synthase-subunit-B
MRLEGLTIGVGFTGSFCTYDKIFIELENLVKEGANVHTIFSDVSQNIDCRFGNSEEFMKKAYELTGNKPIVTIEEAEPFGPKGIADIIIIAPCTGNTAAKLANGITDSPVLMAAKGHLRNDKPLVISISTNDALSFNFKNIGILLNSKNIYFVPFGQDNCKAKPNSMIAHTELIIPTIELALENKQLQPVIKSPHQ
>NZ_CP019870.1|WP_021364737.1|760932_761133_-|hypothetical-protein
MEKLKTISVFSLIISVILTIGGIGIVTYYVDNLFIRGLSVFVLIMSSSFVSTTVRLIFEESKRYKF
>NZ_CP019870.1|WP_003439759.1|761636_764291_+|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAHKEQVIIENKKENEVMSVGLDTVNNVESLVKKLAKIREAQKIFATYSQEQVDKIFLAASLAANKQRVPLAIMAQKETGMGIAEDKVIKNHYASEYIYNAYKETKTCGVIEKDEAFGMTKIAEPIGVIAAVVPTTNPTSTAIFKALLALKTRNGIIFSPHPRAKNSTIEAAKVVLEAAVLAGAPEGIIGWIDEPSLELTTTVMKEVDLTLATGGPGMVKSAYSSGKPAIGVGAGNTPAIIDDSADIKTAVNSILVSKTFDNGMICASEQSVIVLENIYNEVKKEFKERGAYLLDKDETEKIRNIILVNGGLNSKIVGQTACTIAKLAGFEVPVDTKVLIGEVESVEIEEAFAHEKLSPVLAMYKASDFDDAVRKAEKLVEDGGFGHTSSLYIDDVNQREKLDKFTSAMKTCRILINTPSSQGGIGDLYNFKLAPSLTLGCGSWGGNSVSENVGVKHLLNIKTVAERRENMLWFRAPEKVYFKKGCLGVALKELKDVMNKKRAFIVTDTFLYNNGYTKAVTDLLDEMNIKYTTFFEVEPDPTLECAKIGAKAMREFNPDVIISIGGGSAMDAGKIMWTLYEHPDVDFQDLAMRFMDIRKRVYTFPKMGEKANFVAIPTSAGTGSEVTPFAVITDQDTGVKYPLADYELMPNMAIVDSDMMMNMPKSLTSASGIDALTHALEAYVSMLATDYTNGLALQAIKSIFEYLPRAYDNGAKDPEAREKMANASTMAGMAFANAFLGVCHSMAHKLGAFHHVPHGVANALLITEVMKFNSSDAPKKMGAFSQYKYPEALKRYAEIASFLGLKGNSDEEKFQSLLVAIEDLKLKVGIPKSIKEFGVEESKFMDSIDEMVIQAFDDQCTGANPRYPLMNEIKDMYLNSYYGR
>NZ_CP019870.1|WP_078051018.1|764566_766786_+|EAL-domain-containing-protein
MTGRNKSFTLITILFLTSLFLTMGYIYIEDTKHLLMSEAKIHIKEVAVQGSQLAQRQIEKDLDVLNIFSNYYASNPDIPNEEKMKNILDEMENQKFYTMAIVDINGNAENTKGDKFSVKDREFFKNSIKGKKYVSSPYVDEVNKSIKKIAISVPLLNNDKVVGVLYCTYNINTLMKLINISFYENNSISYVVKNNGTIILHPQGDSLSKNIYKLLKQDNDIQEVNRLKKELQENKTGATVLNMLEERRYLGYATMDNGNSENNYIKDWNLIFSIPETVVFSNSKQIINRAVYAVLSIVLIFIAIIFYIIYIKKSNEKEILSLAYEDKVTYIGNQNKFYRECSKYLLDKPSLNYIIVYFDINNFKMINDTFGYEFGDNLLITIAKALKEELTEGEVYARLSSDYFAIFCDYKNGRNKIIRKLDNIRSNIESNLSIVFEISLCVGIYFVEEGEVDIQKAVNKANMARSVAKGKNINYAIYNEDVRNKLSEESMILDDIKIALVKNQFEVYYQPKFSLVTGEMIGSEALIRWNHPEHGFISPAVFIPIAEKSKLILKIGRFVFERVCNDLYEWKKQGKKIVPVSVNLSRVELYQPDIVKFINKTIKMYNLSSDFIEIEITETVAINELNILKNVLNELRTYGFSISMDDFGTGYSSISCLRDMPIDILKLDKSFLGGIEHDERSRNIAKSIVSLAKSLDLVVIIEGVESKEQAELMKQFGCDLVQGFYFARPMPAKNFLDLL

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Crispr_ID: NZ_CP019870_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_4

857463-857674

Orphan

Consensus_repeat	Method
AATCCACCAGTACCACCATCAGAAGA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP019870_4

>merge|NZ_CP019870|4|857463-857674|CRISPRCasFinder
AATCCACCAGTAAATCCACCAATACCTCCAGATACAGATGAACCAATAGTAAATCCACCAGTACCACCAAGCACAGATAAACCAAGGAAACCATCAAGTTCATCTGATACAGAGAATACTATAGTTATAAATCCACCAGTACCACCATCAGAAGATATAATAAATCCGCCAATACCAGAGGTATTGAATCCGCCAGTACCACCATCAGAAGA

>NZ_CP019870|4|3|857463-857674|CRISPRCasFinder
AATCCACCAGTAAATCCACCAATACC	TCCAGATACAGATGAACCAATAGTA
AATCCACCAGTACCACCAAGCACAGA	TAAACCAAGGAAACCATCAAGTTCATCTGATACAGAGAATACTATAGTTATA
AATCCACCAGTACCACCATCAGAAGA	TATAATAAATCCGCCAATACCAGAGGTATTG
AATCCGCCAGTACCACCATCAGAAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_003436151.1\|866415_867588_+\|M20-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349881
NZ_CP019870.1\|WP_003436135.1\|858263_858926_+\|zinc-metalloprotease-Zmp1	unknown	unknown	gnl\|CDD\|380333
NZ_CP019870.1\|WP_003436147.1\|863305_863836_+\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|378898
NZ_CP019870.1\|WP_003436125.1\|850068_852843_+\|calcium-translocating-P-type-ATPase,-PMCA-type	unknown	unknown	gnl\|CDD\|223550
NZ_CP019870.1\|WP_016728946.1\|859047_860010_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP019870.1\|WP_003436145.1\|862123_863218_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|239201
NZ_CP019870.1\|WP_003431751.1\|867601_868249_+\|membrane-protein	unknown	unknown	gnl\|CDD\|225851
NZ_CP019870.1\|WP_003436139.1\|860179_861370_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|180720
NZ_CP019870.1\|WP_003426630.1\|868250_868760_+\|nucleoside-recognition-protein	unknown	unknown	gnl\|CDD\|182513
NZ_CP019870.1\|WP_003436118.1\|841856_843362_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|340432
NZ_CP019870.1\|WP_003426667.1\|853467_854646_+\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_CP019870.1\|WP_003436782.1\|840124_841396_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP019870.1\|WP_003436129.1\|852943_853093_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239827
NZ_CP019870.1\|WP_003436142.1\|861675_862122_+\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_CP019870.1\|WP_009891132.1\|847066_848569_+\|AbgT-family-transporter	unknown	unknown	gnl\|CDD\|225525
NZ_CP019870.1\|WP_003436150.1\|864770_866147_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_171979001.1\|844458_845547_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226458
NZ_CP019870.1\|WP_003436119.1\|843475_844174_+\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP019870.1\|WP_003436123.1\|848640_849897_+\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
NZ_CP019870.1\|WP_003436121.1\|845785_846976_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349882

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_003436135.1\|858263_858926_+\|zinc-metalloprotease-Zmp1	gnl\|CDD\|380333	cd20183, M34_PPEP, Pro-Pro endopeptidase (PPEP) and similar proteins; belongs to peptidase family M34. This subfamily includes the enzyme Pro-Pro endopeptidase (PPEP-1, EC 3.4.24.89, also known as Zmp1 (Clostridium difficile-type)), an extracellular metalloprotease showing a unique specificity for hydrolyzing a Pro-Pro bond. It belongs to peptidase family M34 and has the hallmark metalloprotease motif HEXXH, where the two His residues bind a single zinc atom, and the Glu has a catalytic role. PPEP-1 cleaves two C. difficile cell surface proteins (CD2831 and CD3246) involved in adhesion, one of which is encoded by the gene adjacent to the ppep-1 gene. There are multiple PPEP-1 cleavage sites located just above the site of attachment to the peptidoglycan layer. PPEP-1 may play a role in switching from an adhesive to a motile phenotype. Also included in this subfamily is Paenibacillus alvei PPEP-2, a secreted Pro-Pro endopeptidase. The cleavage motif of PPEP-2, PLP PVP, is distinct from that of PPEP-1 (VNP PVP). PPEP-2 cleavage sites in a cell-surface protein, with putative extracellular matrix-binding domains, and encoded by the adjacent gene, suggests a similar role of PPEP-2 in controlling bacterial adhesion.	1.21055e-106
NZ_CP019870.1\|WP_003436147.1\|863305_863836_+\|flavodoxin-family-protein	gnl\|CDD\|378898	pfam12641, Flavodoxin_3, Flavodoxin domain. This family represents a flavodoxin domain.	1.88002e-71
NZ_CP019870.1\|WP_003436125.1\|850068_852843_+\|calcium-translocating-P-type-ATPase,-PMCA-type	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_CP019870.1\|WP_016728946.1\|859047_860010_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	4.79832e-15
NZ_CP019870.1\|WP_003436145.1\|862123_863218_+\|oxidoreductase	gnl\|CDD\|239201	cd02803, OYE_like_FMN_family, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	2.27468e-79
NZ_CP019870.1\|WP_003431751.1\|867601_868249_+\|membrane-protein	gnl\|CDD\|225851	COG3314, COG3314, Uncharacterized protein conserved in bacteria [Function unknown].	6.22882e-07
NZ_CP019870.1\|WP_003436139.1\|860179_861370_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|180720	PRK06836, PRK06836, pyridoxal phosphate-dependent aminotransferase.	0
NZ_CP019870.1\|WP_003426630.1\|868250_868760_+\|nucleoside-recognition-protein	gnl\|CDD\|182513	PRK10519, PRK10519, hypothetical protein; Provisional.	8.4739e-58
NZ_CP019870.1\|WP_003436118.1\|841856_843362_+\|histidine-kinase	gnl\|CDD\|340432	cd16956, HATPase_YehU-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli YehU. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) including Escherichia coli YehU, a HK of the two-component system (TCS) YehU-YehT which is involved in a nutrient sensing regulatory network. Proteins having this HATPase domain also contain a histidine kinase domain (His-kinase); some have a GAF sensor domain while some have a cupin domain.	2.82867e-47
NZ_CP019870.1\|WP_003426667.1\|853467_854646_+\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	8.33728e-76
NZ_CP019870.1\|WP_003436782.1\|840124_841396_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP019870.1\|WP_003436129.1\|852943_853093_-\|hypothetical-protein	gnl\|CDD\|239827	cd04335, PrdX_deacylase, This CD includes bacterial (Agrobacterium tumefaciens and Caulobacter crescentus ProX, and Clostridium sticklandii PrdX) and eukaryotic (Plasmodium falciparum N-terminal ProRS editing domain) sequences. The C. sticklandii PrdX protein, a homolog of the YbaK and ProX proteins, and the prolyl-tRNA synthetase-editing domain (ProRS-INS), specifically hydrolyzes Ala-tRNA(Pro). In this CD, many of the eukaryotic editing domains are N-terminal and cis-acting, expressed from a multidomain ProRS, however, similar to the bacterial PrdX, the mammalian, amphibian, and echinoderm PrdX-like proteins are trans-acting, single-domain proteins.	5.82187e-05
NZ_CP019870.1\|WP_003436142.1\|861675_862122_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	6.66859e-18
NZ_CP019870.1\|WP_009891132.1\|847066_848569_+\|AbgT-family-transporter	gnl\|CDD\|225525	COG2978, AbgT, Putative p-aminobenzoyl-glutamate transporter [Coenzyme metabolism].	0
NZ_CP019870.1\|WP_003436151.1\|866415_867588_+\|M20-family-metallopeptidase	gnl\|CDD\|349881	cd03885, M20_CPDG2, M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme. Peptidase M20 family, Glutamate carboxypeptidase (carboxypeptidase G; carboxypeptidase G1; carboxypeptidase G2; CPDG2; CPG2; Folate hydrolase G2; Pteroylmonoglutamic acid hydrolase G2; Glucarpidase; E.C. 3.4.17.11) subfamily. CPDG2 is a periplasmic enzyme that is synthesized with a signal peptide. It is a dimeric zinc-dependent exopeptidase, with two domains, a catalytic domain, which provides the ligands for the two zinc ions in the active site, and a dimerization domain. CPDG2 cleaves the C-terminal glutamate moiety from a wide range of N-acyl groups, including peptidyl, aminoacyl, benzoyl, benzyloxycarbonyl, folyl, and pteroyl groups to release benzoic acid, phenol, and aniline mustards. It is used clinically to treat methotrexate toxicity by hydrolyzing it to inactive and non-toxic metabolites. It is also proposed for use in antibody-directed enzyme prodrug therapy; for example, glutamate can be cleaved from glutamated benzoyl nitrogen mustards, producing nitrogen mustards with effective cytotoxicity against tumor cells.	1.99804e-151
NZ_CP019870.1\|WP_171979001.1\|844458_845547_+\|hypothetical-protein	gnl\|CDD\|226458	COG3949, COG3949, Uncharacterized membrane protein [Function unknown].	6.33809e-47
NZ_CP019870.1\|WP_003436119.1\|843475_844174_+\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.92172e-42
NZ_CP019870.1\|WP_003436123.1\|848640_849897_+\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP019870.1\|WP_003436121.1\|845785_846976_+\|amidohydrolase	gnl\|CDD\|349882	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family. Peptidase M20 family, Aminoacylase 1 (ACY1; hippuricase; acylase I; amido acid deacylase; IAA-amino acid hydrolase; dehydropeptidase II; N-acyl-L-amino-acid amidohydrolase; EC 3.5.1.14) subfamily. ACY1 is the most abundant of the aminoacylases, a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. It is encoded by the aminoacylase 1 gene (Acy1) on chromosome 3p21 that comprises 15 exons. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity; substrates include indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine). ACY1 appears to physically interact with Sphingosine kinase type 1 (SphK1) and may influence its physiological functions; SphK1 and its product sphingosine-1-phosphate have been shown to promote cell growth and inhibit apoptosis of tumor cells. Strong expression of the human gene and its mouse ortholog Acy1 in brain, liver, and kidney, suggest a role of the enzyme in amino acid metabolism of these organs. Defects in ACY1 are the cause of aminoacylase-1 deficiency (ACY1D), resulting in a metabolic disorder manifesting encephalopathy and psychomotor delay.	0

>NZ_CP019870.1|WP_003426667.1|853467_854646_+|cation-transporter
MFSKILVKTFIRDSENVQNTDVRNKYGYVAGVVGILSNLLLFVIKVFIGMLTSSIAIMADAFNNLSDMASSAITMIGFKLASKPADKEHPFGHGRIEYLSALIVAFMVMLVGLQFVKSSIERIVNPIPVKFEVIPLILLIASIMIKIWLSRFNKFMGNKIDSSALKAVSLDALGDVFTSSCVVISFIVARFTNFPIDGYVGIVVSLVILYAGFSLVKDTINPLLGEAPDEEMVNSIIELLLSYKYIIGTHDLIIHNYGVGRCIASIHAEIPSNIDIMEIHEIIDTAEREISEKLDIYLVIHMDPICLEDKEVMSAKKELEEILKKNSLVKSMHDFRIVGKGSKKNLIFDIVVNPSEFSKNMSEDDLKEDITKLVKEINPEYNCVIVVDKDFI
>NZ_CP019870.1|WP_003436129.1|852943_853093_-|hypothetical-protein
MFFISYIYTKSPIEFDTPLQKEAYKILQKLDIDFECVDTDEAITMEDCV
>NZ_CP019870.1|WP_003436125.1|850068_852843_+|calcium-translocating-P-type-ATPase,-PMCA-type
MRYYNKPTKEVLKYLKTNPEIGLDDNEVEERKLRYGLNEFTIKEGRTFWDELGESLTEPMILILIGAAVISSFVGELHDALGILGAIFIGISIGIITEGKSKKAAHALSKLTENIEVKVLRNGKIIKISKNDLVPGDIVYIETGDMIPADGRLIQSINLKLREDMLTGESDDVAKNADAVLDMEVVYSKTEIIEQDAIPAKQVNMVFGGTLVAYGRGIMVVTHTGDKTEMGKIAQNLSNEDQQTPLQIKLGKLGAKIAGISGVIATLLCMFMIIQMQRKGMLILDTSSVLSFLQSLEPAKNAYMVCIALIVATVPEGLPTMINITLAITMQKMAKINALVTKKEACETIGSVSVICSDKTGTLTQNKMMVEVAYVDGKYISGGEYQSNSYFEQNCIVNSTADIEKEDNSFKYIGSATECALLLYHNDKNYNEMRKQTYLISQIPFSSEEKKMSTLIRQEDSDILLSKGAPEVLLKKCSYVQQGKNIVPITPKVEKSILDEIKKLQIKSMRTLGFAYKKMSNSKTEVAVTSEGELNLIGNSRSYMKEDNLVFSGFVGIVDPLREGVKDSIDKAFNAGVDVKMLTGDNINTATAIGNELGLLNDGKKAVEATYIDVLTDKELREEIKGISIVARSKPDTKMRIVSALQKSGEVVAVTGDGINDAPALSQADVGIAMGISGTEVSKNAADIILTDDSFSTIVEGIKWGRGIYENFQRFIQFQLTVNIVAFIIAIISQLTGKDMPFTTIQLLWVNIIMDGPPALALGLEPVRDYVLKRKPINRHSGIIARSMFVNIIINAILIITIVFTQSAFNILGATSEEQGTVIFSLFAFSALFNALNCREFGLNSTIPNFFKNKLALQIIVVTGIIQIIFTQVFQSFFNSVSLDFDMWIKIILFASTILLSNEFVKLILRTMKNSRTMNFNSKN
>NZ_CP019870.1|WP_003436123.1|848640_849897_+|serine-hydroxymethyltransferase
MLKTTKISDPELYKIVADELVRQEHNIEMIASESTAPTEVLELSGCVFTNKTEEGYPGARFQAGSEEADKLETLAIKRAKEVFGAEHVNVQPYSGSTANYCVYSSILKPNDTVLSMRLDQGGHLTHGSAVNFLHDIYKYEFYGVDPNTGRIDYDALEAKAKECRPKLIIAGASSYPRLIDYERISKVAKEVGAYFMVDMAHVAGLVAAKVIPSPVPYADFVSSSTTKTFCGPRSGIVLCKAEHAKKLDKGVFPGTLGSIHLNTVAAKAFSLLYLSTDKFKKIMEQVVVNAQTLASELISHGFSIVSGGTDNHIVMVDLRSKNLTGKQFEKALEYVGITVNKNVIPDDPQSPFVTSGVRIGLTSISQRGLKEKEVIQIAGIMNKVAENIDNKEVLDECKAEAQELISKFPLYPEGYFED
>NZ_CP019870.1|WP_009891132.1|847066_848569_+|AbgT-family-transporter
MRALNVVERAGNKLPDPVTIFLLLCIIVVILSAVISNLGVEEIHPSTKEVVKVVNLLEKEQIQSYLGSIVTNFQSFAPLGLVLVTMLGAGVAEKSGFMEVLMKKGISKVPQKLVTVAIVFAGMLSHTAADVGFIILPPLAALVFLGIGRHPLVGMFAAFAGVAGGFAANVMLSTTDVLLAGFTIPAAQMMDPSYQGNPAMNLYFAFISAIVLTFAGAFVTEKFIAPRFTKYNDSTNDKDIQELSELENKGIKYALLSLLVVVVVIVALCIGDNAFMKDPETGSILSSNAPLMKGIVPIITIIFLTPGLVYGKVSKKIKSDKDLVSMMGSSMSDMGGYIVLAFIASQFINLFNLSNLGTILSITGAKLLAESGIPSYGLIIGFILLSGFINLFVGSASAKWAILAPIFVPMFMLLDFNPALTQIAYRIGDASTNPISPLFPYFPVILAFARRYDKDIGIGTVISNMIPYSVVFTLIEIIILLLFMGIGIPLGPGGGISYVL
>NZ_CP019870.1|WP_003436121.1|845785_846976_+|amidohydrolase
MHELILISEKYKEDILDFFTDIHMHPELSFKEFRTTKAIKDLLVSLDIEILDLGMETGVVGLLKGKYDGPTVALRGDIDALPIYEEVDIKYKSRYDGIMHACGHDIHTSCLVGCAYVLSHIRDSLHGNVKFIFQPAEEVNKGAKMLVERGVMENPKVDAIFGLHNHPDIPCGKIGVKLGGLMAAVDTIKIEVNGFGGHGGIPNRTIDPIVASSAIIMGIQTIVSRNISPLESAVISIGTINGGTANNVISEKVDMTGTCRSFSNEVRKKISENLENIVCEIARGYQATAKLDYLFDLPAVINSKEMYAIACKSVCDLYSEDAIVDPIPSTGGEDFSIFMEKAPGFFYWLGVGNKEQDCIYQWHNPKFKADKNSILVGTNVLCQSVINYMDKLKNKI
>NZ_CP019870.1|WP_171979001.1|844458_845547_+|hypothetical-protein
MSDKVNMKNIICIAGAYLATAIGSGFATGQEILQFFASQGYMGLIGALISMVLFSFLGAEVITRGRELKLKEPTRIYTFYCGKILGKLYEWFSPIFLFGILIVMISGAGSTLTEYYGINPYLGRVLMAVATLITVSMGLEKLVSILGRIGPVIAVFTIAVGLISLFKHFDGLSMVGEAMKNIEVTKASESPIVSGVIYNTLNIIVMIVFLTGMGASIESKKDAFWGGLLGGIVFMTAGIVMYLAMISDIGNLYMKEIPSLYLADNISPIVGVCFSVALILGIYTTAVPLLWSVTNRIVEDEHPKFKLVTTVIAILACIGGFLPFGKLVNILYPYTGYMGLLILVCMVYKAITCRKKSTQSQE
>NZ_CP019870.1|WP_003436119.1|843475_844174_+|response-regulator
MRRALIIDDEEAVLKIITHFIEMKDMPIKIVGKATSGDEAVDKIIGLEPDIVFIDIQMPIYNGLEVIEKTSHLSKKINFVVITAFNYFEYAQKALRLNVKDILLKPLDMKEFTKSVEKIIGYQYTNNDLLNEILEYINLNYSNDLKLNDCARLFLTNPSNISRIFKSNLNTTFISYLNHIRIEKSIELLENTTKSINEIAEIVGYNSLNNFYKNFKIEKGMTPKVYKLNTKN
>NZ_CP019870.1|WP_003436118.1|841856_843362_+|histidine-kinase
MKIQNTEWGYIEWKHTYDENNPKQAMNIYIAVTMPGKKHFNHVHYGQEQMIYILEGEGLYIINGVWKPFYQGMIFYIESGSTHETINTGDREIKELIVSNNVDDVGESEVIDINPNNYLKKTLINYSESTLNLYAAVESIRGQFIDPFKIPLIIYDDSWNIVLKNPYFPLFCFEKCNPMKFPQNCDCMNQKSSNQFVCEYGITIYNIPILYKSNSIGVIRGGYVLLSDLNLDTEHNNLYDIPEGAARSIKRLLKQISKNIINFCSFNDIRKDLQEKEKTIARTYHYGEQLEMNLKVAQDMVTNLRINHHFLFNTLNSMASIALDDGSYDLYSAIIDLSRMFRYTMRSDLRFVELESEILYIKNYLNLQKLRYGDALKVKYLIPEKLYNLSVPFNFIQPIVENAFTHGFRDIDTEKRIEIIARLDSQYAIIEIHNNGTILDGNNIDKIKAGIRSNNGHGLSLIYTKFTSAYGNNFDMDIKSSDNEGTYIMIKIPIENYKEYV
>NZ_CP019870.1|WP_003436782.1|840124_841396_+|serine--tRNA-ligase
MLDIKRIRENLDCIKKAMERRGEKDFNLDEVVKLDDERRKILQEVEVMKNELNTASKNIPNLIKEGKDVENEKIKLKELSDKIKVIDQNLKEVEDKMEYLLMRIPNVPHPEVPQGETDEDNVEVRTWGKTTTFDFESKAHWEIGTELGILDFETASKITGSRFTLYKGLGARLERALLNFYLDTNTKVNGYTEVIPPFMANRNSFLGTGQLPKFEEDMFKIEGLDYFMIPTSEVPLTNIHANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKIVAPEESYNELEKLTNNAETMLQLLNLPYRVVKICTGDLGFTASFKYDVEVWMPSYNRYVEISSCSNCEDFQARRAGIRFKRDKDSKAEYVHTLNGSGLAIGRSVAAILENYQQEDGSVVVPEVLRPYMGVSVIK
>NZ_CP019870.1|WP_003436135.1|858263_858926_+|zinc-metalloprotease-Zmp1
MRPSKKLLIAIISIFLISSVPVSAHADSTTIQQNKDTLSQIVVFPTGNYDKNEANAMVNRLANIDGKYLNALKQNNLKIKLLSGKLTDEKEYAYLKGVVPKGWEGTGKTWDDVPGLGGSTVALRIGFSNKGKGHDSINLELHETAHAIDHIVLNDISKSAQFKQIFAKEGRSLGNVNYLGVYPEEFFAESFAYYYLNQDTNSKLKSACPQTYSFLQNLAK
>NZ_CP019870.1|WP_016728946.1|859047_860010_-|EamA-family-transporter
MKKGYVYIILTTLFFSSMEISLKTVTNDFNPLQITLSRFFVGGLVLLPFAVKRLRALSLSITKSDLKYFAFLGFMCVVVSMSLYQLAVLNTKASVVAVLFSCNPVFVMLLAYLILKEKIYRHNVISLILEVLGIIVIINPLHTKLTLSGIFLTLSSAIIFSMYTVFGKRKTLKFGGIVVTCFSFIFGSLEMLILVLLTKINFIADILNKNKLHVFANIPIFSGYTLHNMPIMIYVFVFVTGVGYALYFMAMEATSTSLTSLVFFFKPVISPILALLILKEIIPINMVIGILLIVIGSIISIIPTIITQMHNKHVEALYKE
>NZ_CP019870.1|WP_003436139.1|860179_861370_-|pyridoxal-phosphate-dependent-aminotransferase
MISNKMQTLVANSSVIRAMFEEGKKLSDIYGEENVFDFSIGNPSVEPPETIKAVINDILNEESPNLVHGYMNNSGYEDVRDAIAEHINKKDGLNLTRENLIMTCGAAGGLNIILKTLLNPGDEVIAFAPYFGEYKNYTENYDGKLIEVPTNIETFEPDLDALKNAITPKTRALIINTPNNPTGVIYSEELLKNLGELLDSKQKEFNTSIYLISDEPYREIIYDGAKVPCVLKYYRNSFIGYSYSKSLSLPGERIGYIVANGQMDDFDDVMSSLNVANRILGFVNAPSLFQRVIARSLDAEVDVNIYKKNFDLLYNSLIDMGYSCVKPNGTFYLFPKAPIEDDKKFCNDAKQFNLLLVPGSSFGCPGHFRVSYCVSYDKVKSSLPAFEKLAKLYNLK
>NZ_CP019870.1|WP_003436142.1|861675_862122_+|winged-helix-turn-helix-transcriptional-regulator
MDFKNLQYESLSYIICNLQKNFKLYCEKCLKPYKLTNGLYFYLIYINKNRNCSLNDVSTEFEVDKAHTTRTISRLEQDGYIEKIQNPNDSRAFQLRVTDKGEEVLGDIKNIFSKWDNHIKKEFSDTEYKELVKNLHVVKDIKTAVEEE
>NZ_CP019870.1|WP_003436145.1|862123_863218_+|oxidoreductase
MYCNLLKPIKIGNLELKNRVSFAPTSMGLKLEEKIKKFSDIAKSGVALITLGDVSIRPSFHKVAISLSDEDGVIKYKKIVDEIHNSGAKVSAQLFCSDYDVNLIKDTMNMGITSHDEIKKIMNDGVKDYITNMPKEEIKNIINLFKVTALNAKKAGFDMIQIHGDRLVGSFSSSIFNNRNDEYGGTCDNRSRFASEIISSIRDEVKDIPIDYKFAIRQENPHYGNAGVLLSEVEYFVKKFESLGVNSFHVTLANHSKLEDTIPTNNHPYFKDEGCFLYLADEVKKHTNLPVCGVGKLSSPDFIESIISNNRVDMVSMSRQLLADSNWLQKVKDGRVDEIKKCCYCNKKCADALQTRSQFGCILD
>NZ_CP019870.1|WP_003436147.1|863305_863836_+|flavodoxin-family-protein
MKSLVLYSSLTGNTKKIAYTIYDEIQEEKDIKDVNELVDYGIDYENYDIVFLGYWVDKGICDKNSKQVLENIHNKKIALFGTMGASKKGSYGASIIEKIESIIPKDNEILGSFICQGKIAEGLKAKYKEMLKLSPDNEHIRQQLNNHEESQSHPDEQEIYEASMFAKNMMIKASIV
>NZ_CP019870.1|WP_003436150.1|864770_866147_-|hypothetical-protein
MKYKIGFLTTSYFMSDKFKQALKELNDTCEITFIELKGENPFNNLPNIYYEQVDNFDGFVCSGIVPYSELIINIKDIKVPLNFLKLDERDFYKYLFKLLNSQKDIDFTKSFMDFLREDNNYYDIYSLIDSNKCPYTIKDFNIPQPVYDFKKLNDKLLEIHLDLLRDNKINLSFTRNYIISCELNKLGYDCIYMVPSTESILNTFKSLVNEITLQNLDKNKSATCIVTVNSSEYINEDLIFKNDEIQNQIYNTILNSLSRHGFYGVQVKKNDMKIEIHTTKEMLNNMTNNYTDFFISEDLKEIKYSLNIGWGIGNTNIHAEQNARQANGKSASLNGNCTFIVNDTNDTIGPLYSNKNSNNIEDSSIANKVASFIPLSNTNVSKIMCMINDRNSNNVSAEILADYMNITLRSANRILSILYKAGIATIVNTKLDNQRGRPKKIYKVDFLSFLNKMQKLNS
>NZ_CP019870.1|WP_003436151.1|866415_867588_+|M20-family-metallopeptidase
MNTYLNEISKFVDENREEIVSLWKEIVNMESYTHCKESVNKLAKRLKFEFEKEGLDCELVDVGDNGSTLIGTLGSNIDKKPIIFSGHMDTVFETGTFGENPFKIIEGKAYGPGVLDMKGGIIISLYVIKALNKIGYKERPIKIVFSGDEEIGHKDSTGADVILREAKGGLCAFNMETGLVDNSLCVGRKGRIGCNIHVKGVETHAGNDFEGGRNAIEEMANKILRIQKLTNLDVGTTVSVSVIKGGRVENSIPEDCSIKVDLRFEKVEEMENVKEQVREICKETYIEGTSTEVNFISEMMPFETTEDVMRFHTFVNEVSKENGFGELNAKRLGGSSDASYLTIANVPTICSFGVRGEWNHTSREYAVVNSMFERVKLISTVILNLDKFEV
>NZ_CP019870.1|WP_003431751.1|867601_868249_+|membrane-protein
MDVTAGDNKVTWKGYLSLFVLIVLFSGVFKDSQGFLKALDFANLTGSFGTIADGVDFMGKGGTGAKDGFLFALTLIPTVCFAVGLIDVVESMGGMKAASKIFNPLLRPLLGIPGIAGIAFVSSFTSSDVASIMTKELFESGEITDDERTIFVAYQYAGSAVILNTINTQAPLLPIALLALGPIILIEIFCKILGANLVRLIIGVRNKKNKAKEAV
>NZ_CP019870.1|WP_003426630.1|868250_868760_+|nucleoside-recognition-protein
MSQQNTGNAIVNSKPKKTAVEIFMGGAKKGFYIGVEQILPAMIMGYVIVQFLQLTGLVDILGNIFGPVMGIFGLPGESVVVLIAAFFAKAAGAATAANLFAQGLITAPQATILIMPCMLMGTLVGHYARIVLVANASTKYRMLLLAVPIFDAIVGMLIVRVLLTVMGLM

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Crispr_ID: NZ_CP019870_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_5

966720-966810

Orphan

Consensus_repeat	Method
ATATGTTTAGAAGCTGTAAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019870_5

>merge|NZ_CP019870|5|966720-966810|CRISPRCasFinder
GTATGTATGGAAGCAGTAAAACAGACATATAAATCTCTTAAGTATATAACAAATCAAAATGAGGATATTTGTATAGAAGCAGTAAAACAGA

>NZ_CP019870|5|4|966720-966810|CRISPRCasFinder
GTATGTATGGAAGCAGTAAAACAG	ACATATAAATCTCTTAAGTATATAACAAATCAAAATGAGGAT
ATTTGTATAGAAGCAGTAAAACAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_004454123.1\|956611_957823_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|132848
NZ_CP019870.1\|WP_004454127.1\|965449_966115_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454134.1\|971518_973183_+\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|223733
NZ_CP019870.1\|WP_004454130.1\|968256_968835_+\|accessory-gene-regulator-B-family-protein	unknown	unknown	gnl\|CDD\|377395
NZ_CP019870.1\|WP_003431790.1\|954646_956380_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|380294
NZ_CP019870.1\|WP_003426450.1\|975658_976171_+\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_CP019870.1\|WP_003426473.1\|954208_954607_+\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP019870.1\|WP_004454126.1\|962241_964944_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP019870.1\|WP_011861669.1\|960665_962216_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP019870.1\|WP_004454137.1\|978940_979555_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_CP019870.1\|WP_004454121.1\|951437_952343_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP019870.1\|WP_003426456.1\|969315_970695_+\|thioether-cross-link-forming-SCIFF-peptide-maturase	unknown	unknown	gnl\|CDD\|274892
NZ_CP019870.1\|WP_004454124.1\|958630_960343_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_CP019870.1\|WP_004454135.1\|973195_975646_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
NZ_CP019870.1\|WP_003422921.1\|976244_978452_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP019870.1\|WP_003422895.1\|958016_958277_+\|HPr-family-phosphocarrier-protein	unknown	unknown	gnl\|CDD\|376329
NZ_CP019870.1\|WP_004454132.1\|970723_971221_+\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP019870.1\|WP_003426448.1\|978476_978926_+\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_CP019870.1\|WP_003426457.1\|968864_969011_+\|cyclic-lactone-autoinducer-peptide	unknown	unknown	gnl\|CDD\|275064
NZ_CP019870.1\|WP_004454122.1\|952658_954206_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_004454123.1\|956611_957823_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|132848	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	5.38193e-61
NZ_CP019870.1\|WP_004454134.1\|971518_973183_+\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	1.41299e-141
NZ_CP019870.1\|WP_003426457.1\|968864_969011_+\|cyclic-lactone-autoinducer-peptide	gnl\|CDD\|275064	TIGR04223, quorum_AgrD, cyclic lactone autoinducer peptide. Members of this family of short peptides are precursors to thiolactone (unless Cys is replaced by Ser) cyclic autoinducer peptides, used in quorum-sensing systems in Gram-positive bacteria. The best characterized is the AgrD precursor, processed by the AgrB protein. Nearby proteins regularly encountered include a histidine kinase and a response regulator. This model is related to pfam05931 but is newer and currently broader in scope.	4.07974e-08
NZ_CP019870.1\|WP_003431790.1\|954646_956380_+\|N-6-DNA-methylase	gnl\|CDD\|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	7.41689e-18
NZ_CP019870.1\|WP_003426450.1\|975658_976171_+\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.26188e-100
NZ_CP019870.1\|WP_004454130.1\|968256_968835_+\|accessory-gene-regulator-B-family-protein	gnl\|CDD\|377395	pfam04647, AgrB, Accessory gene regulator B. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein.	4.92858e-22
NZ_CP019870.1\|WP_004454126.1\|962241_964944_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.18685e-70
NZ_CP019870.1\|WP_011861669.1\|960665_962216_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	4.20668e-39
NZ_CP019870.1\|WP_003426448.1\|978476_978926_+\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	1.06886e-98
NZ_CP019870.1\|WP_004454121.1\|951437_952343_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	1.89602e-72
NZ_CP019870.1\|WP_003426456.1\|969315_970695_+\|thioether-cross-link-forming-SCIFF-peptide-maturase	gnl\|CDD\|274892	TIGR03974, six-Cys-in-45_modification_radical_SAM_protein, SCIFF radical SAM maturase. Members of this protein family are predicted radical SAM enzymes universally associated with Six Cysteines in Forty-Five protein, or SCIFF (family TIGR03973), a predicted ribosomal natural product precursor that is nearly universal in the class Clostridia. Similarity of this family to radical SAM maturases (PqqE and subtilosin A maturase) found in the vicinity of other peptide precursors suggests this protein is the SCIFF radical SAM maturase. [Cellular processes, Biosynthesis of natural products].	0
NZ_CP019870.1\|WP_004454124.1\|958630_960343_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_CP019870.1\|WP_004454135.1\|973195_975646_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP019870.1\|WP_003422895.1\|958016_958277_+\|HPr-family-phosphocarrier-protein	gnl\|CDD\|376329	pfam00381, PTS-HPr, PTS HPr component phosphorylation site.	1.66602e-32
NZ_CP019870.1\|WP_003426473.1\|954208_954607_+\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	4.93588e-10
NZ_CP019870.1\|WP_004454132.1\|970723_971221_+\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	6.21398e-81
NZ_CP019870.1\|WP_003422921.1\|976244_978452_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP019870.1\|WP_004454137.1\|978940_979555_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	6.95373e-73
NZ_CP019870.1\|WP_004454122.1\|952658_954206_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	4.4803e-89

>NZ_CP019870.1|WP_004454127.1|965449_966115_-|hypothetical-protein
MKGNIVQYNFADIEEEVYSLDYAIAWNTDEENVNIIPFTNKFCKESIESFCLGKINNFVEILNEGFVENHHYVHLDKMISVPKKKVNLVYQQDTHGYLLRDDNDNLIPAKITSEQSKSISSKMELFSAGEEKCLINILLKADPSYILDVDSIKDKNILNLGYESIDRYKEYNFDDDKILIFFINKKRYSVIMKKTNNSDNDLVSRNNAIKELFTNKAGNLN
>NZ_CP019870.1|WP_004454126.1|962241_964944_+|EAL-domain-containing-protein
MKNVSKKFFVCTIIVLITFLCFSKFAIYVFDKQEKKETKVVENMLNVYKNNIILNLTEKFNYSKDLTSVLVSNNYSIDKLKPIADEILKNNSCIYISVVEKYNVAAFFSNSVKKDIINTPIQELNYSYSLANSIKGLVVEGPSKDQFSNGDVFLITNPIYKNGEYWGEITVALDAKKVVDSFNLNKLKESGFEYELWRVHLDNGSKSTIEISTKDFNFSKSHEIKFKLPTVWTLSIVYKNGWNNKNIDFIVFVILLIISILIGVMTFIYIEKKSISKELNQQSLKNLETGILNREGFLIKLQEHLNRKNNEIVLLYICITNYSKFAPVMSFEKRQDYLTHIVKNLDNYIKSSHFIARISEEGFVLALEENCDKNELLNIEKGISLELLRKIKVENKQVFLTIGYGSSRCVDDRKDAESLLLSAIEDYERRFPAMSPIHDFTKKCEDMLDEKKQIVFGEYPDLEINKLSKVIYKYYKKVQRIMYKDYNIDIGNRRGYMRDVEVLIDYNSERMLYLFLIDICKFGKFNELFSIEIGDVILKEVSNKLKTIFSNYLYRINGDVFLGISIDKESYLDTLHKVNEVFNSSLSVEDVLFDIKCNIGICQYPYHGENPYDLLEKVQIALEYAKKDVKSNVKVYDKELTEEIYHENNIIKDLKKGLEEQTLEVWYQPIFNVSKNCYIKAEALIRLRNKEGGYYSAYEVITYAEKHGLIKDVGLYVLKKACDVTTKIKDKNIDFEQMQLNLSVQQIVHKQCANDILSCIENCGLDKKYICVEVTETVLMETFEIVNVTLDKLKKEGISIALDEFGSGFSSINYLANLPIENLKIDKELVEQITYSKKQFELLKTIVQIAKINGMDIVAEGVETKETLDLVVTSGVNLIQGHYFSEPLSEDKFIELMIEE
>NZ_CP019870.1|WP_011861669.1|960665_962216_+|GGDEF-domain-containing-protein
MRYKKRNIDKSSELSFQSLAKYFITFYIVIILIILSMFCINTIWVMKKDNQDLLSTTSNRIEDRVGETIKLLNSLSKDNYIIDNSVNGIDKSKELSMYSDEFGYMMICFVDKNIIVWDEEGGNISLAGRDYMQKLFATKKYQVTDSFAAGADGKTLNYTIASPIIKNGNVDGCVFAAIYFDEIKDILKQGKGQQQQNFILFGSENQIMNLTSDETAYGEKYMKLSQKTKYLGTNAKKVEKDMFNNKSGDYWAFENGKLYFMSYKPIKNTNWSLFCKVNFLDIFALNLIPMGAILSVITLVFIILICMEKSFMKKRMEVIDMLLGSVQELEKRIYQTERPSEVDFKEIIQLTSKGLTDGLTGVVTRTVFFDQIYNRVEMEENDKLSVISFVDLDDLKCINDLYGHEIGDMVLKNVGYVLREYEIKYNGLIGRYGGDEFVMLLSGFTSREEVEDLLDEIAIRLHTEVLTDDGIIQTHCSVGAVVCSVKDNKDIDNLLKQADEALYYVKRNGKGNYHLV
>NZ_CP019870.1|WP_004454124.1|958630_960343_+|phosphoenolpyruvate--protein-phosphotransferase
MAYKGIGASPGVALGKALVVEHSELVIEKKSIDNVEAEIAKLEDAVAVSKEELVKVKEKASEELGAEEAEIFEAHLLVLEDPELIGSAIDKIKTESVNAEYALNEIKEMFVSMFESMDNEYMKERAADIKDVTNRILRHILGIKVVDLSALSEEVVLIAHDLTPSDTATMNKKMVLGFLTDIGGRTSHTAIMSRTLEIAAIVGLNDITSKVKDGDFVVFNGDTGEVIVNPDEETINKYTELKAKYEDERKALQLLKGKPSVTLDGKHVELAGNIGTPNDIEGLIKNDAEGVGLYRTEFLYMDRDSFPTEEIQYEAYKAVLEGMDGKPIVIRTLDIGGDKELSYLSMEPEMNPFLGYRAIRLCLDRKDIFKTQLRALYRASVHGRLRIMFPMISSLEELLQAKEVVKEVLAELDSEGVAYAKDVEIGMMIEVPSAAVISDVLAKHVDFFSIGTNDLIQYTCAVDRMNQKISYLYNQFNPAVLRLIKTVIDNAHKEGKWAGMCGESAGDQKMIPILLGMGLDEFSMSPISILPARKLITSVKESDMKKLADDVFNMGTAEEIKSYIEKTFNI
>NZ_CP019870.1|WP_003422895.1|958016_958277_+|HPr-family-phosphocarrier-protein
MEKVVSIKNASGLHARPAGMFVKKAAEFKSTVEVVAKDKTVNAKSIMGIMSLGLAQGEELKLVVNGEDEEVALAAMVELVESGFGE
>NZ_CP019870.1|WP_004454123.1|956611_957823_+|patatin-like-phospholipase-family-protein
MKGLVLEGGGTKGAYQIGAYKALRELGIEFQGVTGTSIGALNGAYIVQNDIEVMEDIWLNYDYTHFMNIDRETYERFKNVDFTTKNLNAVFELINKARKNEGIDISPLRQLMETTLNEDIIRKSKKDFGLVTVWWDKKINPYPLYIEDIPKGRLIDYLIASSSLPIFQTNMMDDKLYLDGMFCDNMPIGLLEDKGYEDVVVIRLIDDFIGKMNLNRHQNINIKTIIPSEYLGGSLNKDRDNVEKNIRLGYLDTMKAYERCTGIKYYFDVEYKYNEEYCFDKFRSMSNETIQYICNLLNIKRDASLRTVMESVIPKLGEVLGLPKDFSYKDLFYCIYEKKLEENNINRIKLYDFNKVIDVVNTNIDSNRNLASNFEVRPKISIKKNKNTKLLTNCIIKDIKNQS
>NZ_CP019870.1|WP_003431790.1|954646_956380_+|N-6-DNA-methylase
MDDISQDNFLLSKEYENSLDVDTKKASGIYYTPKIIVDYIVKKTLKNHDIIKNPYPRILDISCGCGNFLLEVYDILYDLFEENIYELKKKYDENYWTVDNIHRHILNYCIYGADIDEKAISILKDSLTNKKVVNDLDESDIKINLFCCDSLKKKWRYKFDYIVGNPPYIGHKKLEKKYKKFLLEKYSEVYKDKADLYFCFYKKIIDILKQGGIGSVITPRYFLESLSGKDLREYIKSNVNVQEIVDFLGANIFKNIGVSSCILTFDKKKTKETYIDVFKIKNEDICINKFETLEELLKSSKFEHFNINQRLLSDEWILVNKDDETFYNKIQEKCKYSLEDIAISFQGIITGCDKAFILSKDDVKLNLVDDKFLKCWIKSKNINKYIVDKSEYRLIYSNDIDNENTNKRILDEIIGLYKTKLENRRECKSGIRKWYELQWGREKLFFERKKIMYPYKSNENRFAIDYDNNFSSADVYSFFIKEEYLDKFSYEYLVGILNSSVYDKYFKITAKKMSKNIYDYYPNKVMKIRIFRDNNYEEIENLSKQIISILLNKSIDKGKVEKLQIKMDNLIMDSLGI
>NZ_CP019870.1|WP_003426473.1|954208_954607_+|Rrf2-family-transcriptional-regulator
MISEDVDYSIRIIRAIFNNGEDKPIDAKMILKSEDIPILTLYRLLRKLCANNILTFNKEDGKTYMLNVSLDTISLRTIVEVIDGKIYINKCTRYVSNCSNCLKGCKVNRELLEIEKEIYKLLSRKSIRQILE
>NZ_CP019870.1|WP_004454122.1|952658_954206_+|EAL-domain-containing-protein
MNKNSMTRIYSLNKIIFIIIGILGIVLLTRHIEVDIKVLILILLTLFSINVFISYLKIKLYEDKINLGLINNSDKFINITKDENFLKHVQNYIISNEKENCVMACFDLCRLKLINDIYGYELGDEVLNNILSNLKNYFGKEAIYGKLKSDVFVLIIKLENREQKIPYLVNLIKNKIVILSQIDSFKMDINIEASIGIYKFNNNEIDIKKAIDNADMARLKSKGLKHIEYVEFDNAMEEEIQSIMKIERDLFLAIKNKEFVIHYQPKVDSSTGNIIGSEALIRWLHPSLGMVGPNKFIPIAEKNGLINNIGRWLIQEVFITINKWISEGINVLPVSINLSRVELYKNDLVDFFKLMFNTYNIPKELIELEITETTALRDVKFISERLYEIKSLGMNISLDDFGVGNSNFINLKGIPLDIIKIDRSLILDIVTNTKTKFMVKAIVNLSHDLNVTVICEGVEDMHQVKVLSELGCNFIQGYVFFKPLDEMNYKKLLTDGSYINLKDTLLDKCMTVEEE
>NZ_CP019870.1|WP_004454121.1|951437_952343_+|N-acetylmuramoyl-L-alanine-amidase
MKKKLLDGKITLIICKSVKIYTKKGEEMSKGNNNNNSRNKSKKTSHLNRKKRKLNKKKLAVLICFTVLFLFIAFKATQGVVALVKSMDKSNKTNQQQNVNSEQFDLGNEEENKKKKYTVFIDPGHGGNDKGTESKTSNRYEKDLNLQIAKKLANKLSKQKDIQVVVSRTDDTYISLKDRAILANNSSADVLVSIHLNAEKNGNTATGIETWYRNKATDGSKELAQTVQSTIVSYVKVRDRGIVENNFEVLRESNMPAILIECGFLTTPSEEQKIINEKYQDQLAEGIVQGVLSYLDSKGNK
>NZ_CP019870.1|WP_004454130.1|968256_968835_+|accessory-gene-regulator-B-family-protein
MFKRYAEKMTSVLICNNMIDNNESKVYSYGFEILIAFIVNITTMLFIGFLFGKFTYVLFFLMCYCPIRQFSGGYHADNYFRCLLTFIFIILSTILIIENINIDLFKNIIMIIASVSWVGICVLCPIEHRSNPISDREKLVYKKTAIFISTVVLLITILSLSLSIFVDYFTYSAFAMFWIFVMLVLGKLKAKV
>NZ_CP019870.1|WP_003426457.1|968864_969011_+|cyclic-lactone-autoinducer-peptide
MKKFIVRFMKFASSLALSTAILSANSTCPWIIHQPKVPKEISNLKKTN
>NZ_CP019870.1|WP_003426456.1|969315_970695_+|thioether-cross-link-forming-SCIFF-peptide-maturase
MSMIHKFSMNGYNIVLDVNGGAVHVLDDVAYDLLDFYKEKSKEEILEILKSKYQEEKINEAYEEILNLEKEGLLYTEDTYQYHPSFVHREPVVKALCLNVAHDCNLKCKYCFAAQGDFGGEKELMSFEVGKAAIDYLIANSGSRKNLEIDFFGGEPLMNFEVVKQLVDYGRSVEKDYNKNIRFTITTNGVLLNDEIIDYINENMHNVVLSLDGRKEVNDNMRPTLNDKGSYDITLPRFKKLVEKRAKDKYYYIRGTFTRDNLDFSKDVMHFADLGFKLTSVEPVVGDESNPYALREEDLPKIFEEYEKFAVEYADRQLQGDGFKFFHFMIDLNQGPCVIKRITGCGAGNEYLSVTPNGDIYPCHQFVGNEEFKMANIFDEEIVLPENLKNMFREAHVYTKEECKQCWNKFYCSGGCHANAINFNNDISKPYELGCEMQRKRTECSIMIQAKLMLEGATN
>NZ_CP019870.1|WP_004454132.1|970723_971221_+|gamma-carbonic-anhydrase-family-protein
MIRDYLEDKPLIDESVFVAKSADVIGNVKIGKDSSIWYNAVVRGDEGPITIGENTNIQDCSIVHGDTETIIGNNVTVGHRSIVHGCKISDNVLIGMGSIILDNAEIGEYTLIGAGTLITSNKKFPPGVLIMGSPGKVVRELTEEDKKYIDESYEWYLEAAQNQKY
>NZ_CP019870.1|WP_004454134.1|971518_973183_+|AarF/ABC1/UbiB-kinase-family-protein
MRISYRNLKRYREIGYVLIKYGFSFIVERLNIEGIAYKIPLFDPPEEIKNMTTGERMKRVLEELGPTYIKIGQILSTRKDLLDQDIIDEISKLRDDVEKFDSNIAIDIFKEEVGLSIEEIFLEFKEEPIAAASIGQVYEGVLKTGEEVIVKIQRPNIEKIIKSDLEILRTIANTLKDLKKDFNLDLVQMIEEFQTQLMRELDYTFEAINATKFSRIFKNSDEVYIPKVYSEYNTKKILVMEKVNGTKLSDVEKIRRLGYNTKTIVEIGVRSFFTQVLSHGFFHADPHPGNIFVIAKNKIAYIDFGMIGIIDNKTLNQLNEIALAGVEKNVDKIIYLLIEMDALNGEADIKGLRQDLLYLIHYYYDISIEKINVTDILNELFRFFRQYKIVMPAQFVTLAKTVITLEGTSRTLNTDFSFGSMGKEFMKHHYKSKFNPKNVVLSSRQNVEEILLDIKTIPKQLKAILKNIERNNIKMQIEDVKMTRLENCIIELTSQISLSLVLASIIVGSSLIIASPNIENNIWIKFTAIAGFFISFIIGLCLVIRSIRSKYKKD
>NZ_CP019870.1|WP_004454135.1|973195_975646_+|single-stranded-DNA-specific-exonuclease-RecJ
MKKWILKYKGKIEESEFSKKLNISPEICQILKNRGICTEKDSEIFMNPSLDYLRDPFLMKDMQKAVDRIKLAVEKNEKIWIYGDYDVDGVSSTSILCLYFKSIGYNVDYYIPNRLEEGYGINEDAIKLISSRGCDLIISVDCGITSVSEVNTANDLGIDVIITDHHECQSEIPSAFAVINPKQEDCNYPFDSLCGCGVAFKMIQALTPKEEFKTSMYNYLEIVTLATICDIVPLIDENRIIVKNGLKSMKEGKNIGLRELIKVCGVESDKIGSSHIGFAIGPRINASGRLGYSYLGVELFTTQSQEEAVEIASILEEKNNERQMIEAKMYHEAEEMLKSNSRYNDDKVLVLAKEGWQHGIIGIVASKLTEKYYKPTILLGIENGEATGSARSIKGFNIFEALIKCKDLMTKFGGHEQAAGLSLDSDNVEILANEINKFADYNLTEDDMIENVNVEFELQENVINLNLVEELHKLEPFGLNNPNPRFIVRNYILKDLKVIGKNQQHLKLSIEKEKSYECIGFNMSHLKSMYKVGDKVDVLFQLDENNYMGNRKVQFLLKDIRLARPKSASNDKLSLKLMSKIIPKDTQSLYNISVSDFELFDGNTDINIFDYFEKDTLIISNSINGFYRAMSDISLIDLDFNINYNIIEDVSKNTDKLELIFSPNIDKIDLKRYNNIILYDYLYNKGEYSYIYENKREESEIIKYYNKTDLLYLKNVVSNIVPSRDEFITIYKQALIKKEIDLDMVNIRETFNVIPLKFFTILNVFRELNLLDFNLNYEKNSVLIRILPKPQKKLDLNESLILNNLKNLEKQYNSSY
>NZ_CP019870.1|WP_003426450.1|975658_976171_+|adenine-phosphoribosyltransferase
MDLKNFIRNIDDFPKPGIDFKDVTTLFKDGDAFKYAVDSIVEELKDKDVDLVIGPEARGFLMGTPVAYALGVGFVPIRKPGKLPGEVESYEYGLEYGTDTLEIHKDAIKKGQKVAIVDDLLATGGTMEAAAKLVEKLGGEVVSMQFLIELKFLNGREKLSNYDVNSLIKY
>NZ_CP019870.1|WP_003422921.1|976244_978452_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MHDKELQEIIEKIKVYAPNANFEMVEKAYNLAKKAHEGQYRKSGEPYFIHPLAVANILIEMELDIETITAGLLHDVVEDTEYTYEDIKKEFGKEVADLVDGVTKLGQIKYRSKEETQSENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPEKAKYKAKETLEIYGGIAHRLGISKIKWELEDRALRFMDPEGYYDLVSRVSMKRSQREDYIQGIVELLKDKFKDLSIPCDVYGRPKHFYSIYRKMQKKHKTFEEIFDLTAVRILVDNVKDCYAVLGIVHTLWRPIPGRFKDYIAMPKPNMYQSLHTTVVGPDGEPLEIQIRTHEMHNIAENGIAAHWKYKEGISSKESKVEEKLQWLRQMMEWEKDLKDPQEFMDALKEDVFNSQVYVFTPKGDVIELPAESTPIDFAYRVHTNVGNKCVGAKIDGRIVPIDYKLQNGNIVEVLTSSNSNGPSRDWLNIVKTPNAKSRIRQFFKKERREENVDRGNTILEREFKKHDIPQKDPLVEKYMALVAKKFNQPSVEDLIATVGYGGIMSSQVVSKVKDLYLKEVKKAKKEQQIQEEDLNKHNISETEYSKKRKKNASQGIIVKGLDNILVRFAKCCNPLPGDEIVGYITKGRGVAIHRADCPNANNNGDFFQNRLVEVSWSSAGKGKFEAEIQIKAIDRRGIVNEITHIVAMDKLSLNGINARKGKDSIVSINLLVEVNDTEELKILMKKLKAIPGVESIYRMTN
>NZ_CP019870.1|WP_003426448.1|978476_978926_+|D-tyrosyl-tRNA(Tyr)-deacylase
MRAVVQRVSSSKVTVDENTIGQINKGLLVLLGVTHDDKSSDVDYMIDKILNLRIFEDENDKMNLSLMDIGGELLVVSQFTLYGDCRKGRRPGFSNAARPELANNLYEEFVKKAKDKGVTVGTGQFAAHMMVELTNDGPVTILLDSSKSF
>NZ_CP019870.1|WP_004454137.1|978940_979555_+|MBL-fold-metallo-hydrolase
MIIKKFVDSYFGVNTYVLGDEKTKKCAVIDPGGSLVETLSFVKENELNIEYIILTHGHGDHIGYVKDIKEKTGAKVVAHVDEKELLNDKNKNLSYTMRCGAQEFDADIYVNDKDKLELGELKMTFLHTPGHTQGCMCIRVEDEMFTGDTLFAGSIGRTDLYSGDFNQMEKSLKKLCKYEDAVRVYPGHGPTSTLGVEKKTNPYM

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Crispr_ID: NZ_CP019870_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_7

967410-967583

Orphan

Consensus_repeat	Method
ATATGTTTAGAAGCTGTAAAAAAA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP019870_7

>merge|NZ_CP019870|7|967410-967583|CRISPRCasFinder
ATATGTATAGAAGCAGTAAGAGGTTCATTTGAAGAACTTGAAATAAAAGAAATATTAAGTTATGTAAAGATACCAACAGAAAGAATATTTGTAGAAGCAGTAAAGCAAAATGGAAAAATTCTTAAATATGTAGAAAATCAGACAGAATTAATATGTTTAGAGGCAGTAAGAGAA

>NZ_CP019870|7|6|967410-967583|CRISPRCasFinder
ATATGTATAGAAGCAGTAAGAGGT	TCATTTGAAGAACTTGAAATAAAAGAAATATTAAGTTATGTAAAGATACCAACAGAAAGA
ATATTTGTAGAAGCAGTAAAGCAA	AATGGAAAAATTCTTAAATATGTAGAAAATCAGACAGAATTA
ATATGTTTAGAGGCAGTAAGAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_004454123.1\|956611_957823_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|132848
NZ_CP019870.1\|WP_004454127.1\|965449_966115_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454134.1\|971518_973183_+\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|223733
NZ_CP019870.1\|WP_004454130.1\|968256_968835_+\|accessory-gene-regulator-B-family-protein	unknown	unknown	gnl\|CDD\|377395
NZ_CP019870.1\|WP_003431790.1\|954646_956380_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|380294
NZ_CP019870.1\|WP_003426450.1\|975658_976171_+\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_CP019870.1\|WP_003426473.1\|954208_954607_+\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP019870.1\|WP_004454126.1\|962241_964944_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP019870.1\|WP_011861669.1\|960665_962216_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP019870.1\|WP_004454137.1\|978940_979555_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_CP019870.1\|WP_004454121.1\|951437_952343_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP019870.1\|WP_003426456.1\|969315_970695_+\|thioether-cross-link-forming-SCIFF-peptide-maturase	unknown	unknown	gnl\|CDD\|274892
NZ_CP019870.1\|WP_004454124.1\|958630_960343_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_CP019870.1\|WP_004454135.1\|973195_975646_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
NZ_CP019870.1\|WP_003422921.1\|976244_978452_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP019870.1\|WP_003422895.1\|958016_958277_+\|HPr-family-phosphocarrier-protein	unknown	unknown	gnl\|CDD\|376329
NZ_CP019870.1\|WP_004454132.1\|970723_971221_+\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP019870.1\|WP_003426448.1\|978476_978926_+\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_CP019870.1\|WP_003426457.1\|968864_969011_+\|cyclic-lactone-autoinducer-peptide	unknown	unknown	gnl\|CDD\|275064
NZ_CP019870.1\|WP_004454122.1\|952658_954206_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_004454123.1\|956611_957823_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|132848	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	5.38193e-61
NZ_CP019870.1\|WP_004454134.1\|971518_973183_+\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	1.41299e-141
NZ_CP019870.1\|WP_003426457.1\|968864_969011_+\|cyclic-lactone-autoinducer-peptide	gnl\|CDD\|275064	TIGR04223, quorum_AgrD, cyclic lactone autoinducer peptide. Members of this family of short peptides are precursors to thiolactone (unless Cys is replaced by Ser) cyclic autoinducer peptides, used in quorum-sensing systems in Gram-positive bacteria. The best characterized is the AgrD precursor, processed by the AgrB protein. Nearby proteins regularly encountered include a histidine kinase and a response regulator. This model is related to pfam05931 but is newer and currently broader in scope.	4.07974e-08
NZ_CP019870.1\|WP_003431790.1\|954646_956380_+\|N-6-DNA-methylase	gnl\|CDD\|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	7.41689e-18
NZ_CP019870.1\|WP_003426450.1\|975658_976171_+\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.26188e-100
NZ_CP019870.1\|WP_004454130.1\|968256_968835_+\|accessory-gene-regulator-B-family-protein	gnl\|CDD\|377395	pfam04647, AgrB, Accessory gene regulator B. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein.	4.92858e-22
NZ_CP019870.1\|WP_004454126.1\|962241_964944_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.18685e-70
NZ_CP019870.1\|WP_011861669.1\|960665_962216_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	4.20668e-39
NZ_CP019870.1\|WP_003426448.1\|978476_978926_+\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	1.06886e-98
NZ_CP019870.1\|WP_004454121.1\|951437_952343_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	1.89602e-72
NZ_CP019870.1\|WP_003426456.1\|969315_970695_+\|thioether-cross-link-forming-SCIFF-peptide-maturase	gnl\|CDD\|274892	TIGR03974, six-Cys-in-45_modification_radical_SAM_protein, SCIFF radical SAM maturase. Members of this protein family are predicted radical SAM enzymes universally associated with Six Cysteines in Forty-Five protein, or SCIFF (family TIGR03973), a predicted ribosomal natural product precursor that is nearly universal in the class Clostridia. Similarity of this family to radical SAM maturases (PqqE and subtilosin A maturase) found in the vicinity of other peptide precursors suggests this protein is the SCIFF radical SAM maturase. [Cellular processes, Biosynthesis of natural products].	0
NZ_CP019870.1\|WP_004454124.1\|958630_960343_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_CP019870.1\|WP_004454135.1\|973195_975646_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP019870.1\|WP_003422895.1\|958016_958277_+\|HPr-family-phosphocarrier-protein	gnl\|CDD\|376329	pfam00381, PTS-HPr, PTS HPr component phosphorylation site.	1.66602e-32
NZ_CP019870.1\|WP_003426473.1\|954208_954607_+\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	4.93588e-10
NZ_CP019870.1\|WP_004454132.1\|970723_971221_+\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	6.21398e-81
NZ_CP019870.1\|WP_003422921.1\|976244_978452_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP019870.1\|WP_004454137.1\|978940_979555_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	6.95373e-73
NZ_CP019870.1\|WP_004454122.1\|952658_954206_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	4.4803e-89

>NZ_CP019870.1|WP_004454127.1|965449_966115_-|hypothetical-protein
MKGNIVQYNFADIEEEVYSLDYAIAWNTDEENVNIIPFTNKFCKESIESFCLGKINNFVEILNEGFVENHHYVHLDKMISVPKKKVNLVYQQDTHGYLLRDDNDNLIPAKITSEQSKSISSKMELFSAGEEKCLINILLKADPSYILDVDSIKDKNILNLGYESIDRYKEYNFDDDKILIFFINKKRYSVIMKKTNNSDNDLVSRNNAIKELFTNKAGNLN
>NZ_CP019870.1|WP_004454126.1|962241_964944_+|EAL-domain-containing-protein
MKNVSKKFFVCTIIVLITFLCFSKFAIYVFDKQEKKETKVVENMLNVYKNNIILNLTEKFNYSKDLTSVLVSNNYSIDKLKPIADEILKNNSCIYISVVEKYNVAAFFSNSVKKDIINTPIQELNYSYSLANSIKGLVVEGPSKDQFSNGDVFLITNPIYKNGEYWGEITVALDAKKVVDSFNLNKLKESGFEYELWRVHLDNGSKSTIEISTKDFNFSKSHEIKFKLPTVWTLSIVYKNGWNNKNIDFIVFVILLIISILIGVMTFIYIEKKSISKELNQQSLKNLETGILNREGFLIKLQEHLNRKNNEIVLLYICITNYSKFAPVMSFEKRQDYLTHIVKNLDNYIKSSHFIARISEEGFVLALEENCDKNELLNIEKGISLELLRKIKVENKQVFLTIGYGSSRCVDDRKDAESLLLSAIEDYERRFPAMSPIHDFTKKCEDMLDEKKQIVFGEYPDLEINKLSKVIYKYYKKVQRIMYKDYNIDIGNRRGYMRDVEVLIDYNSERMLYLFLIDICKFGKFNELFSIEIGDVILKEVSNKLKTIFSNYLYRINGDVFLGISIDKESYLDTLHKVNEVFNSSLSVEDVLFDIKCNIGICQYPYHGENPYDLLEKVQIALEYAKKDVKSNVKVYDKELTEEIYHENNIIKDLKKGLEEQTLEVWYQPIFNVSKNCYIKAEALIRLRNKEGGYYSAYEVITYAEKHGLIKDVGLYVLKKACDVTTKIKDKNIDFEQMQLNLSVQQIVHKQCANDILSCIENCGLDKKYICVEVTETVLMETFEIVNVTLDKLKKEGISIALDEFGSGFSSINYLANLPIENLKIDKELVEQITYSKKQFELLKTIVQIAKINGMDIVAEGVETKETLDLVVTSGVNLIQGHYFSEPLSEDKFIELMIEE
>NZ_CP019870.1|WP_011861669.1|960665_962216_+|GGDEF-domain-containing-protein
MRYKKRNIDKSSELSFQSLAKYFITFYIVIILIILSMFCINTIWVMKKDNQDLLSTTSNRIEDRVGETIKLLNSLSKDNYIIDNSVNGIDKSKELSMYSDEFGYMMICFVDKNIIVWDEEGGNISLAGRDYMQKLFATKKYQVTDSFAAGADGKTLNYTIASPIIKNGNVDGCVFAAIYFDEIKDILKQGKGQQQQNFILFGSENQIMNLTSDETAYGEKYMKLSQKTKYLGTNAKKVEKDMFNNKSGDYWAFENGKLYFMSYKPIKNTNWSLFCKVNFLDIFALNLIPMGAILSVITLVFIILICMEKSFMKKRMEVIDMLLGSVQELEKRIYQTERPSEVDFKEIIQLTSKGLTDGLTGVVTRTVFFDQIYNRVEMEENDKLSVISFVDLDDLKCINDLYGHEIGDMVLKNVGYVLREYEIKYNGLIGRYGGDEFVMLLSGFTSREEVEDLLDEIAIRLHTEVLTDDGIIQTHCSVGAVVCSVKDNKDIDNLLKQADEALYYVKRNGKGNYHLV
>NZ_CP019870.1|WP_004454124.1|958630_960343_+|phosphoenolpyruvate--protein-phosphotransferase
MAYKGIGASPGVALGKALVVEHSELVIEKKSIDNVEAEIAKLEDAVAVSKEELVKVKEKASEELGAEEAEIFEAHLLVLEDPELIGSAIDKIKTESVNAEYALNEIKEMFVSMFESMDNEYMKERAADIKDVTNRILRHILGIKVVDLSALSEEVVLIAHDLTPSDTATMNKKMVLGFLTDIGGRTSHTAIMSRTLEIAAIVGLNDITSKVKDGDFVVFNGDTGEVIVNPDEETINKYTELKAKYEDERKALQLLKGKPSVTLDGKHVELAGNIGTPNDIEGLIKNDAEGVGLYRTEFLYMDRDSFPTEEIQYEAYKAVLEGMDGKPIVIRTLDIGGDKELSYLSMEPEMNPFLGYRAIRLCLDRKDIFKTQLRALYRASVHGRLRIMFPMISSLEELLQAKEVVKEVLAELDSEGVAYAKDVEIGMMIEVPSAAVISDVLAKHVDFFSIGTNDLIQYTCAVDRMNQKISYLYNQFNPAVLRLIKTVIDNAHKEGKWAGMCGESAGDQKMIPILLGMGLDEFSMSPISILPARKLITSVKESDMKKLADDVFNMGTAEEIKSYIEKTFNI
>NZ_CP019870.1|WP_003422895.1|958016_958277_+|HPr-family-phosphocarrier-protein
MEKVVSIKNASGLHARPAGMFVKKAAEFKSTVEVVAKDKTVNAKSIMGIMSLGLAQGEELKLVVNGEDEEVALAAMVELVESGFGE
>NZ_CP019870.1|WP_004454123.1|956611_957823_+|patatin-like-phospholipase-family-protein
MKGLVLEGGGTKGAYQIGAYKALRELGIEFQGVTGTSIGALNGAYIVQNDIEVMEDIWLNYDYTHFMNIDRETYERFKNVDFTTKNLNAVFELINKARKNEGIDISPLRQLMETTLNEDIIRKSKKDFGLVTVWWDKKINPYPLYIEDIPKGRLIDYLIASSSLPIFQTNMMDDKLYLDGMFCDNMPIGLLEDKGYEDVVVIRLIDDFIGKMNLNRHQNINIKTIIPSEYLGGSLNKDRDNVEKNIRLGYLDTMKAYERCTGIKYYFDVEYKYNEEYCFDKFRSMSNETIQYICNLLNIKRDASLRTVMESVIPKLGEVLGLPKDFSYKDLFYCIYEKKLEENNINRIKLYDFNKVIDVVNTNIDSNRNLASNFEVRPKISIKKNKNTKLLTNCIIKDIKNQS
>NZ_CP019870.1|WP_003431790.1|954646_956380_+|N-6-DNA-methylase
MDDISQDNFLLSKEYENSLDVDTKKASGIYYTPKIIVDYIVKKTLKNHDIIKNPYPRILDISCGCGNFLLEVYDILYDLFEENIYELKKKYDENYWTVDNIHRHILNYCIYGADIDEKAISILKDSLTNKKVVNDLDESDIKINLFCCDSLKKKWRYKFDYIVGNPPYIGHKKLEKKYKKFLLEKYSEVYKDKADLYFCFYKKIIDILKQGGIGSVITPRYFLESLSGKDLREYIKSNVNVQEIVDFLGANIFKNIGVSSCILTFDKKKTKETYIDVFKIKNEDICINKFETLEELLKSSKFEHFNINQRLLSDEWILVNKDDETFYNKIQEKCKYSLEDIAISFQGIITGCDKAFILSKDDVKLNLVDDKFLKCWIKSKNINKYIVDKSEYRLIYSNDIDNENTNKRILDEIIGLYKTKLENRRECKSGIRKWYELQWGREKLFFERKKIMYPYKSNENRFAIDYDNNFSSADVYSFFIKEEYLDKFSYEYLVGILNSSVYDKYFKITAKKMSKNIYDYYPNKVMKIRIFRDNNYEEIENLSKQIISILLNKSIDKGKVEKLQIKMDNLIMDSLGI
>NZ_CP019870.1|WP_003426473.1|954208_954607_+|Rrf2-family-transcriptional-regulator
MISEDVDYSIRIIRAIFNNGEDKPIDAKMILKSEDIPILTLYRLLRKLCANNILTFNKEDGKTYMLNVSLDTISLRTIVEVIDGKIYINKCTRYVSNCSNCLKGCKVNRELLEIEKEIYKLLSRKSIRQILE
>NZ_CP019870.1|WP_004454122.1|952658_954206_+|EAL-domain-containing-protein
MNKNSMTRIYSLNKIIFIIIGILGIVLLTRHIEVDIKVLILILLTLFSINVFISYLKIKLYEDKINLGLINNSDKFINITKDENFLKHVQNYIISNEKENCVMACFDLCRLKLINDIYGYELGDEVLNNILSNLKNYFGKEAIYGKLKSDVFVLIIKLENREQKIPYLVNLIKNKIVILSQIDSFKMDINIEASIGIYKFNNNEIDIKKAIDNADMARLKSKGLKHIEYVEFDNAMEEEIQSIMKIERDLFLAIKNKEFVIHYQPKVDSSTGNIIGSEALIRWLHPSLGMVGPNKFIPIAEKNGLINNIGRWLIQEVFITINKWISEGINVLPVSINLSRVELYKNDLVDFFKLMFNTYNIPKELIELEITETTALRDVKFISERLYEIKSLGMNISLDDFGVGNSNFINLKGIPLDIIKIDRSLILDIVTNTKTKFMVKAIVNLSHDLNVTVICEGVEDMHQVKVLSELGCNFIQGYVFFKPLDEMNYKKLLTDGSYINLKDTLLDKCMTVEEE
>NZ_CP019870.1|WP_004454121.1|951437_952343_+|N-acetylmuramoyl-L-alanine-amidase
MKKKLLDGKITLIICKSVKIYTKKGEEMSKGNNNNNSRNKSKKTSHLNRKKRKLNKKKLAVLICFTVLFLFIAFKATQGVVALVKSMDKSNKTNQQQNVNSEQFDLGNEEENKKKKYTVFIDPGHGGNDKGTESKTSNRYEKDLNLQIAKKLANKLSKQKDIQVVVSRTDDTYISLKDRAILANNSSADVLVSIHLNAEKNGNTATGIETWYRNKATDGSKELAQTVQSTIVSYVKVRDRGIVENNFEVLRESNMPAILIECGFLTTPSEEQKIINEKYQDQLAEGIVQGVLSYLDSKGNK
>NZ_CP019870.1|WP_004454130.1|968256_968835_+|accessory-gene-regulator-B-family-protein
MFKRYAEKMTSVLICNNMIDNNESKVYSYGFEILIAFIVNITTMLFIGFLFGKFTYVLFFLMCYCPIRQFSGGYHADNYFRCLLTFIFIILSTILIIENINIDLFKNIIMIIASVSWVGICVLCPIEHRSNPISDREKLVYKKTAIFISTVVLLITILSLSLSIFVDYFTYSAFAMFWIFVMLVLGKLKAKV
>NZ_CP019870.1|WP_003426457.1|968864_969011_+|cyclic-lactone-autoinducer-peptide
MKKFIVRFMKFASSLALSTAILSANSTCPWIIHQPKVPKEISNLKKTN
>NZ_CP019870.1|WP_003426456.1|969315_970695_+|thioether-cross-link-forming-SCIFF-peptide-maturase
MSMIHKFSMNGYNIVLDVNGGAVHVLDDVAYDLLDFYKEKSKEEILEILKSKYQEEKINEAYEEILNLEKEGLLYTEDTYQYHPSFVHREPVVKALCLNVAHDCNLKCKYCFAAQGDFGGEKELMSFEVGKAAIDYLIANSGSRKNLEIDFFGGEPLMNFEVVKQLVDYGRSVEKDYNKNIRFTITTNGVLLNDEIIDYINENMHNVVLSLDGRKEVNDNMRPTLNDKGSYDITLPRFKKLVEKRAKDKYYYIRGTFTRDNLDFSKDVMHFADLGFKLTSVEPVVGDESNPYALREEDLPKIFEEYEKFAVEYADRQLQGDGFKFFHFMIDLNQGPCVIKRITGCGAGNEYLSVTPNGDIYPCHQFVGNEEFKMANIFDEEIVLPENLKNMFREAHVYTKEECKQCWNKFYCSGGCHANAINFNNDISKPYELGCEMQRKRTECSIMIQAKLMLEGATN
>NZ_CP019870.1|WP_004454132.1|970723_971221_+|gamma-carbonic-anhydrase-family-protein
MIRDYLEDKPLIDESVFVAKSADVIGNVKIGKDSSIWYNAVVRGDEGPITIGENTNIQDCSIVHGDTETIIGNNVTVGHRSIVHGCKISDNVLIGMGSIILDNAEIGEYTLIGAGTLITSNKKFPPGVLIMGSPGKVVRELTEEDKKYIDESYEWYLEAAQNQKY
>NZ_CP019870.1|WP_004454134.1|971518_973183_+|AarF/ABC1/UbiB-kinase-family-protein
MRISYRNLKRYREIGYVLIKYGFSFIVERLNIEGIAYKIPLFDPPEEIKNMTTGERMKRVLEELGPTYIKIGQILSTRKDLLDQDIIDEISKLRDDVEKFDSNIAIDIFKEEVGLSIEEIFLEFKEEPIAAASIGQVYEGVLKTGEEVIVKIQRPNIEKIIKSDLEILRTIANTLKDLKKDFNLDLVQMIEEFQTQLMRELDYTFEAINATKFSRIFKNSDEVYIPKVYSEYNTKKILVMEKVNGTKLSDVEKIRRLGYNTKTIVEIGVRSFFTQVLSHGFFHADPHPGNIFVIAKNKIAYIDFGMIGIIDNKTLNQLNEIALAGVEKNVDKIIYLLIEMDALNGEADIKGLRQDLLYLIHYYYDISIEKINVTDILNELFRFFRQYKIVMPAQFVTLAKTVITLEGTSRTLNTDFSFGSMGKEFMKHHYKSKFNPKNVVLSSRQNVEEILLDIKTIPKQLKAILKNIERNNIKMQIEDVKMTRLENCIIELTSQISLSLVLASIIVGSSLIIASPNIENNIWIKFTAIAGFFISFIIGLCLVIRSIRSKYKKD
>NZ_CP019870.1|WP_004454135.1|973195_975646_+|single-stranded-DNA-specific-exonuclease-RecJ
MKKWILKYKGKIEESEFSKKLNISPEICQILKNRGICTEKDSEIFMNPSLDYLRDPFLMKDMQKAVDRIKLAVEKNEKIWIYGDYDVDGVSSTSILCLYFKSIGYNVDYYIPNRLEEGYGINEDAIKLISSRGCDLIISVDCGITSVSEVNTANDLGIDVIITDHHECQSEIPSAFAVINPKQEDCNYPFDSLCGCGVAFKMIQALTPKEEFKTSMYNYLEIVTLATICDIVPLIDENRIIVKNGLKSMKEGKNIGLRELIKVCGVESDKIGSSHIGFAIGPRINASGRLGYSYLGVELFTTQSQEEAVEIASILEEKNNERQMIEAKMYHEAEEMLKSNSRYNDDKVLVLAKEGWQHGIIGIVASKLTEKYYKPTILLGIENGEATGSARSIKGFNIFEALIKCKDLMTKFGGHEQAAGLSLDSDNVEILANEINKFADYNLTEDDMIENVNVEFELQENVINLNLVEELHKLEPFGLNNPNPRFIVRNYILKDLKVIGKNQQHLKLSIEKEKSYECIGFNMSHLKSMYKVGDKVDVLFQLDENNYMGNRKVQFLLKDIRLARPKSASNDKLSLKLMSKIIPKDTQSLYNISVSDFELFDGNTDINIFDYFEKDTLIISNSINGFYRAMSDISLIDLDFNINYNIIEDVSKNTDKLELIFSPNIDKIDLKRYNNIILYDYLYNKGEYSYIYENKREESEIIKYYNKTDLLYLKNVVSNIVPSRDEFITIYKQALIKKEIDLDMVNIRETFNVIPLKFFTILNVFRELNLLDFNLNYEKNSVLIRILPKPQKKLDLNESLILNNLKNLEKQYNSSY
>NZ_CP019870.1|WP_003426450.1|975658_976171_+|adenine-phosphoribosyltransferase
MDLKNFIRNIDDFPKPGIDFKDVTTLFKDGDAFKYAVDSIVEELKDKDVDLVIGPEARGFLMGTPVAYALGVGFVPIRKPGKLPGEVESYEYGLEYGTDTLEIHKDAIKKGQKVAIVDDLLATGGTMEAAAKLVEKLGGEVVSMQFLIELKFLNGREKLSNYDVNSLIKY
>NZ_CP019870.1|WP_003422921.1|976244_978452_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MHDKELQEIIEKIKVYAPNANFEMVEKAYNLAKKAHEGQYRKSGEPYFIHPLAVANILIEMELDIETITAGLLHDVVEDTEYTYEDIKKEFGKEVADLVDGVTKLGQIKYRSKEETQSENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPEKAKYKAKETLEIYGGIAHRLGISKIKWELEDRALRFMDPEGYYDLVSRVSMKRSQREDYIQGIVELLKDKFKDLSIPCDVYGRPKHFYSIYRKMQKKHKTFEEIFDLTAVRILVDNVKDCYAVLGIVHTLWRPIPGRFKDYIAMPKPNMYQSLHTTVVGPDGEPLEIQIRTHEMHNIAENGIAAHWKYKEGISSKESKVEEKLQWLRQMMEWEKDLKDPQEFMDALKEDVFNSQVYVFTPKGDVIELPAESTPIDFAYRVHTNVGNKCVGAKIDGRIVPIDYKLQNGNIVEVLTSSNSNGPSRDWLNIVKTPNAKSRIRQFFKKERREENVDRGNTILEREFKKHDIPQKDPLVEKYMALVAKKFNQPSVEDLIATVGYGGIMSSQVVSKVKDLYLKEVKKAKKEQQIQEEDLNKHNISETEYSKKRKKNASQGIIVKGLDNILVRFAKCCNPLPGDEIVGYITKGRGVAIHRADCPNANNNGDFFQNRLVEVSWSSAGKGKFEAEIQIKAIDRRGIVNEITHIVAMDKLSLNGINARKGKDSIVSINLLVEVNDTEELKILMKKLKAIPGVESIYRMTN
>NZ_CP019870.1|WP_003426448.1|978476_978926_+|D-tyrosyl-tRNA(Tyr)-deacylase
MRAVVQRVSSSKVTVDENTIGQINKGLLVLLGVTHDDKSSDVDYMIDKILNLRIFEDENDKMNLSLMDIGGELLVVSQFTLYGDCRKGRRPGFSNAARPELANNLYEEFVKKAKDKGVTVGTGQFAAHMMVELTNDGPVTILLDSSKSF
>NZ_CP019870.1|WP_004454137.1|978940_979555_+|MBL-fold-metallo-hydrolase
MIIKKFVDSYFGVNTYVLGDEKTKKCAVIDPGGSLVETLSFVKENELNIEYIILTHGHGDHIGYVKDIKEKTGAKVVAHVDEKELLNDKNKNLSYTMRCGAQEFDADIYVNDKDKLELGELKMTFLHTPGHTQGCMCIRVEDEMFTGDTLFAGSIGRTDLYSGDFNQMEKSLKKLCKYEDAVRVYPGHGPTSTLGVEKKTNPYM

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Crispr_ID: NZ_CP019870_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_6

967014-967302

Orphan

Consensus_repeat	Method
ATATGTTTAGAAGCTGTAAAAAAA	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP019870_6

>merge|NZ_CP019870|6|967014-967302|CRISPRCasFinder
ATATGTTTAGAAGCTGTAAAAAAAGATGGAAAATCTTTAGCTTATGTAAAGGAACAAAGTAATAGTATATGTTTAGAAGCTGTAAAAGAAAACTACAGTGCACTATCTTGTGTAAAAGAGCAAACTGAAGAAATATGTATAGAAGCAGTAAAACAGAATGACTTTGCATTGTATTATGTAAATGAACAGACAGAAAAAATATGTATGGAAGCAGTAAAAAGAAGTTATATGGCTCTACAGTATGTAAATAAGCAAACAGAAGAGATTTGTTTGGAAGCAGTAAGAATTG

>NZ_CP019870|6|5|967014-967302|CRISPRCasFinder
ATATGTTTAGAAGCTGTAAAAAAA	GATGGAAAATCTTTAGCTTATGTAAAGGAACAAAGTAATAGT
ATATGTTTAGAAGCTGTAAAAGAA	AACTACAGTGCACTATCTTGTGTAAAAGAGCAAACTGAAGAA
ATATGTATAGAAGCAGTAAAACAG	AATGACTTTGCATTGTATTATGTAAATGAACAGACAGAAAAA
ATATGTATGGAAGCAGTAAAAAGA	AGTTATATGGCTCTACAGTATGTAAATAAGCAAACAGAAGAG
ATTTGTTTGGAAGCAGTAAGAATTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_004454123.1\|956611_957823_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|132848
NZ_CP019870.1\|WP_004454127.1\|965449_966115_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454134.1\|971518_973183_+\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|223733
NZ_CP019870.1\|WP_004454130.1\|968256_968835_+\|accessory-gene-regulator-B-family-protein	unknown	unknown	gnl\|CDD\|377395
NZ_CP019870.1\|WP_003431790.1\|954646_956380_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|380294
NZ_CP019870.1\|WP_003426450.1\|975658_976171_+\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_CP019870.1\|WP_003426473.1\|954208_954607_+\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP019870.1\|WP_004454126.1\|962241_964944_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP019870.1\|WP_011861669.1\|960665_962216_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP019870.1\|WP_004454137.1\|978940_979555_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_CP019870.1\|WP_004454121.1\|951437_952343_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP019870.1\|WP_003426456.1\|969315_970695_+\|thioether-cross-link-forming-SCIFF-peptide-maturase	unknown	unknown	gnl\|CDD\|274892
NZ_CP019870.1\|WP_004454124.1\|958630_960343_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_CP019870.1\|WP_004454135.1\|973195_975646_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
NZ_CP019870.1\|WP_003422921.1\|976244_978452_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP019870.1\|WP_003422895.1\|958016_958277_+\|HPr-family-phosphocarrier-protein	unknown	unknown	gnl\|CDD\|376329
NZ_CP019870.1\|WP_004454132.1\|970723_971221_+\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP019870.1\|WP_003426448.1\|978476_978926_+\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_CP019870.1\|WP_003426457.1\|968864_969011_+\|cyclic-lactone-autoinducer-peptide	unknown	unknown	gnl\|CDD\|275064
NZ_CP019870.1\|WP_004454122.1\|952658_954206_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_004454123.1\|956611_957823_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|132848	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	5.38193e-61
NZ_CP019870.1\|WP_004454134.1\|971518_973183_+\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	1.41299e-141
NZ_CP019870.1\|WP_003426457.1\|968864_969011_+\|cyclic-lactone-autoinducer-peptide	gnl\|CDD\|275064	TIGR04223, quorum_AgrD, cyclic lactone autoinducer peptide. Members of this family of short peptides are precursors to thiolactone (unless Cys is replaced by Ser) cyclic autoinducer peptides, used in quorum-sensing systems in Gram-positive bacteria. The best characterized is the AgrD precursor, processed by the AgrB protein. Nearby proteins regularly encountered include a histidine kinase and a response regulator. This model is related to pfam05931 but is newer and currently broader in scope.	4.07974e-08
NZ_CP019870.1\|WP_003431790.1\|954646_956380_+\|N-6-DNA-methylase	gnl\|CDD\|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	7.41689e-18
NZ_CP019870.1\|WP_003426450.1\|975658_976171_+\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.26188e-100
NZ_CP019870.1\|WP_004454130.1\|968256_968835_+\|accessory-gene-regulator-B-family-protein	gnl\|CDD\|377395	pfam04647, AgrB, Accessory gene regulator B. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein.	4.92858e-22
NZ_CP019870.1\|WP_004454126.1\|962241_964944_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.18685e-70
NZ_CP019870.1\|WP_011861669.1\|960665_962216_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	4.20668e-39
NZ_CP019870.1\|WP_003426448.1\|978476_978926_+\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	1.06886e-98
NZ_CP019870.1\|WP_004454121.1\|951437_952343_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	1.89602e-72
NZ_CP019870.1\|WP_003426456.1\|969315_970695_+\|thioether-cross-link-forming-SCIFF-peptide-maturase	gnl\|CDD\|274892	TIGR03974, six-Cys-in-45_modification_radical_SAM_protein, SCIFF radical SAM maturase. Members of this protein family are predicted radical SAM enzymes universally associated with Six Cysteines in Forty-Five protein, or SCIFF (family TIGR03973), a predicted ribosomal natural product precursor that is nearly universal in the class Clostridia. Similarity of this family to radical SAM maturases (PqqE and subtilosin A maturase) found in the vicinity of other peptide precursors suggests this protein is the SCIFF radical SAM maturase. [Cellular processes, Biosynthesis of natural products].	0
NZ_CP019870.1\|WP_004454124.1\|958630_960343_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_CP019870.1\|WP_004454135.1\|973195_975646_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP019870.1\|WP_003422895.1\|958016_958277_+\|HPr-family-phosphocarrier-protein	gnl\|CDD\|376329	pfam00381, PTS-HPr, PTS HPr component phosphorylation site.	1.66602e-32
NZ_CP019870.1\|WP_003426473.1\|954208_954607_+\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	4.93588e-10
NZ_CP019870.1\|WP_004454132.1\|970723_971221_+\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	6.21398e-81
NZ_CP019870.1\|WP_003422921.1\|976244_978452_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP019870.1\|WP_004454137.1\|978940_979555_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	6.95373e-73
NZ_CP019870.1\|WP_004454122.1\|952658_954206_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	4.4803e-89

>NZ_CP019870.1|WP_004454127.1|965449_966115_-|hypothetical-protein
MKGNIVQYNFADIEEEVYSLDYAIAWNTDEENVNIIPFTNKFCKESIESFCLGKINNFVEILNEGFVENHHYVHLDKMISVPKKKVNLVYQQDTHGYLLRDDNDNLIPAKITSEQSKSISSKMELFSAGEEKCLINILLKADPSYILDVDSIKDKNILNLGYESIDRYKEYNFDDDKILIFFINKKRYSVIMKKTNNSDNDLVSRNNAIKELFTNKAGNLN
>NZ_CP019870.1|WP_004454126.1|962241_964944_+|EAL-domain-containing-protein
MKNVSKKFFVCTIIVLITFLCFSKFAIYVFDKQEKKETKVVENMLNVYKNNIILNLTEKFNYSKDLTSVLVSNNYSIDKLKPIADEILKNNSCIYISVVEKYNVAAFFSNSVKKDIINTPIQELNYSYSLANSIKGLVVEGPSKDQFSNGDVFLITNPIYKNGEYWGEITVALDAKKVVDSFNLNKLKESGFEYELWRVHLDNGSKSTIEISTKDFNFSKSHEIKFKLPTVWTLSIVYKNGWNNKNIDFIVFVILLIISILIGVMTFIYIEKKSISKELNQQSLKNLETGILNREGFLIKLQEHLNRKNNEIVLLYICITNYSKFAPVMSFEKRQDYLTHIVKNLDNYIKSSHFIARISEEGFVLALEENCDKNELLNIEKGISLELLRKIKVENKQVFLTIGYGSSRCVDDRKDAESLLLSAIEDYERRFPAMSPIHDFTKKCEDMLDEKKQIVFGEYPDLEINKLSKVIYKYYKKVQRIMYKDYNIDIGNRRGYMRDVEVLIDYNSERMLYLFLIDICKFGKFNELFSIEIGDVILKEVSNKLKTIFSNYLYRINGDVFLGISIDKESYLDTLHKVNEVFNSSLSVEDVLFDIKCNIGICQYPYHGENPYDLLEKVQIALEYAKKDVKSNVKVYDKELTEEIYHENNIIKDLKKGLEEQTLEVWYQPIFNVSKNCYIKAEALIRLRNKEGGYYSAYEVITYAEKHGLIKDVGLYVLKKACDVTTKIKDKNIDFEQMQLNLSVQQIVHKQCANDILSCIENCGLDKKYICVEVTETVLMETFEIVNVTLDKLKKEGISIALDEFGSGFSSINYLANLPIENLKIDKELVEQITYSKKQFELLKTIVQIAKINGMDIVAEGVETKETLDLVVTSGVNLIQGHYFSEPLSEDKFIELMIEE
>NZ_CP019870.1|WP_011861669.1|960665_962216_+|GGDEF-domain-containing-protein
MRYKKRNIDKSSELSFQSLAKYFITFYIVIILIILSMFCINTIWVMKKDNQDLLSTTSNRIEDRVGETIKLLNSLSKDNYIIDNSVNGIDKSKELSMYSDEFGYMMICFVDKNIIVWDEEGGNISLAGRDYMQKLFATKKYQVTDSFAAGADGKTLNYTIASPIIKNGNVDGCVFAAIYFDEIKDILKQGKGQQQQNFILFGSENQIMNLTSDETAYGEKYMKLSQKTKYLGTNAKKVEKDMFNNKSGDYWAFENGKLYFMSYKPIKNTNWSLFCKVNFLDIFALNLIPMGAILSVITLVFIILICMEKSFMKKRMEVIDMLLGSVQELEKRIYQTERPSEVDFKEIIQLTSKGLTDGLTGVVTRTVFFDQIYNRVEMEENDKLSVISFVDLDDLKCINDLYGHEIGDMVLKNVGYVLREYEIKYNGLIGRYGGDEFVMLLSGFTSREEVEDLLDEIAIRLHTEVLTDDGIIQTHCSVGAVVCSVKDNKDIDNLLKQADEALYYVKRNGKGNYHLV
>NZ_CP019870.1|WP_004454124.1|958630_960343_+|phosphoenolpyruvate--protein-phosphotransferase
MAYKGIGASPGVALGKALVVEHSELVIEKKSIDNVEAEIAKLEDAVAVSKEELVKVKEKASEELGAEEAEIFEAHLLVLEDPELIGSAIDKIKTESVNAEYALNEIKEMFVSMFESMDNEYMKERAADIKDVTNRILRHILGIKVVDLSALSEEVVLIAHDLTPSDTATMNKKMVLGFLTDIGGRTSHTAIMSRTLEIAAIVGLNDITSKVKDGDFVVFNGDTGEVIVNPDEETINKYTELKAKYEDERKALQLLKGKPSVTLDGKHVELAGNIGTPNDIEGLIKNDAEGVGLYRTEFLYMDRDSFPTEEIQYEAYKAVLEGMDGKPIVIRTLDIGGDKELSYLSMEPEMNPFLGYRAIRLCLDRKDIFKTQLRALYRASVHGRLRIMFPMISSLEELLQAKEVVKEVLAELDSEGVAYAKDVEIGMMIEVPSAAVISDVLAKHVDFFSIGTNDLIQYTCAVDRMNQKISYLYNQFNPAVLRLIKTVIDNAHKEGKWAGMCGESAGDQKMIPILLGMGLDEFSMSPISILPARKLITSVKESDMKKLADDVFNMGTAEEIKSYIEKTFNI
>NZ_CP019870.1|WP_003422895.1|958016_958277_+|HPr-family-phosphocarrier-protein
MEKVVSIKNASGLHARPAGMFVKKAAEFKSTVEVVAKDKTVNAKSIMGIMSLGLAQGEELKLVVNGEDEEVALAAMVELVESGFGE
>NZ_CP019870.1|WP_004454123.1|956611_957823_+|patatin-like-phospholipase-family-protein
MKGLVLEGGGTKGAYQIGAYKALRELGIEFQGVTGTSIGALNGAYIVQNDIEVMEDIWLNYDYTHFMNIDRETYERFKNVDFTTKNLNAVFELINKARKNEGIDISPLRQLMETTLNEDIIRKSKKDFGLVTVWWDKKINPYPLYIEDIPKGRLIDYLIASSSLPIFQTNMMDDKLYLDGMFCDNMPIGLLEDKGYEDVVVIRLIDDFIGKMNLNRHQNINIKTIIPSEYLGGSLNKDRDNVEKNIRLGYLDTMKAYERCTGIKYYFDVEYKYNEEYCFDKFRSMSNETIQYICNLLNIKRDASLRTVMESVIPKLGEVLGLPKDFSYKDLFYCIYEKKLEENNINRIKLYDFNKVIDVVNTNIDSNRNLASNFEVRPKISIKKNKNTKLLTNCIIKDIKNQS
>NZ_CP019870.1|WP_003431790.1|954646_956380_+|N-6-DNA-methylase
MDDISQDNFLLSKEYENSLDVDTKKASGIYYTPKIIVDYIVKKTLKNHDIIKNPYPRILDISCGCGNFLLEVYDILYDLFEENIYELKKKYDENYWTVDNIHRHILNYCIYGADIDEKAISILKDSLTNKKVVNDLDESDIKINLFCCDSLKKKWRYKFDYIVGNPPYIGHKKLEKKYKKFLLEKYSEVYKDKADLYFCFYKKIIDILKQGGIGSVITPRYFLESLSGKDLREYIKSNVNVQEIVDFLGANIFKNIGVSSCILTFDKKKTKETYIDVFKIKNEDICINKFETLEELLKSSKFEHFNINQRLLSDEWILVNKDDETFYNKIQEKCKYSLEDIAISFQGIITGCDKAFILSKDDVKLNLVDDKFLKCWIKSKNINKYIVDKSEYRLIYSNDIDNENTNKRILDEIIGLYKTKLENRRECKSGIRKWYELQWGREKLFFERKKIMYPYKSNENRFAIDYDNNFSSADVYSFFIKEEYLDKFSYEYLVGILNSSVYDKYFKITAKKMSKNIYDYYPNKVMKIRIFRDNNYEEIENLSKQIISILLNKSIDKGKVEKLQIKMDNLIMDSLGI
>NZ_CP019870.1|WP_003426473.1|954208_954607_+|Rrf2-family-transcriptional-regulator
MISEDVDYSIRIIRAIFNNGEDKPIDAKMILKSEDIPILTLYRLLRKLCANNILTFNKEDGKTYMLNVSLDTISLRTIVEVIDGKIYINKCTRYVSNCSNCLKGCKVNRELLEIEKEIYKLLSRKSIRQILE
>NZ_CP019870.1|WP_004454122.1|952658_954206_+|EAL-domain-containing-protein
MNKNSMTRIYSLNKIIFIIIGILGIVLLTRHIEVDIKVLILILLTLFSINVFISYLKIKLYEDKINLGLINNSDKFINITKDENFLKHVQNYIISNEKENCVMACFDLCRLKLINDIYGYELGDEVLNNILSNLKNYFGKEAIYGKLKSDVFVLIIKLENREQKIPYLVNLIKNKIVILSQIDSFKMDINIEASIGIYKFNNNEIDIKKAIDNADMARLKSKGLKHIEYVEFDNAMEEEIQSIMKIERDLFLAIKNKEFVIHYQPKVDSSTGNIIGSEALIRWLHPSLGMVGPNKFIPIAEKNGLINNIGRWLIQEVFITINKWISEGINVLPVSINLSRVELYKNDLVDFFKLMFNTYNIPKELIELEITETTALRDVKFISERLYEIKSLGMNISLDDFGVGNSNFINLKGIPLDIIKIDRSLILDIVTNTKTKFMVKAIVNLSHDLNVTVICEGVEDMHQVKVLSELGCNFIQGYVFFKPLDEMNYKKLLTDGSYINLKDTLLDKCMTVEEE
>NZ_CP019870.1|WP_004454121.1|951437_952343_+|N-acetylmuramoyl-L-alanine-amidase
MKKKLLDGKITLIICKSVKIYTKKGEEMSKGNNNNNSRNKSKKTSHLNRKKRKLNKKKLAVLICFTVLFLFIAFKATQGVVALVKSMDKSNKTNQQQNVNSEQFDLGNEEENKKKKYTVFIDPGHGGNDKGTESKTSNRYEKDLNLQIAKKLANKLSKQKDIQVVVSRTDDTYISLKDRAILANNSSADVLVSIHLNAEKNGNTATGIETWYRNKATDGSKELAQTVQSTIVSYVKVRDRGIVENNFEVLRESNMPAILIECGFLTTPSEEQKIINEKYQDQLAEGIVQGVLSYLDSKGNK
>NZ_CP019870.1|WP_004454130.1|968256_968835_+|accessory-gene-regulator-B-family-protein
MFKRYAEKMTSVLICNNMIDNNESKVYSYGFEILIAFIVNITTMLFIGFLFGKFTYVLFFLMCYCPIRQFSGGYHADNYFRCLLTFIFIILSTILIIENINIDLFKNIIMIIASVSWVGICVLCPIEHRSNPISDREKLVYKKTAIFISTVVLLITILSLSLSIFVDYFTYSAFAMFWIFVMLVLGKLKAKV
>NZ_CP019870.1|WP_003426457.1|968864_969011_+|cyclic-lactone-autoinducer-peptide
MKKFIVRFMKFASSLALSTAILSANSTCPWIIHQPKVPKEISNLKKTN
>NZ_CP019870.1|WP_003426456.1|969315_970695_+|thioether-cross-link-forming-SCIFF-peptide-maturase
MSMIHKFSMNGYNIVLDVNGGAVHVLDDVAYDLLDFYKEKSKEEILEILKSKYQEEKINEAYEEILNLEKEGLLYTEDTYQYHPSFVHREPVVKALCLNVAHDCNLKCKYCFAAQGDFGGEKELMSFEVGKAAIDYLIANSGSRKNLEIDFFGGEPLMNFEVVKQLVDYGRSVEKDYNKNIRFTITTNGVLLNDEIIDYINENMHNVVLSLDGRKEVNDNMRPTLNDKGSYDITLPRFKKLVEKRAKDKYYYIRGTFTRDNLDFSKDVMHFADLGFKLTSVEPVVGDESNPYALREEDLPKIFEEYEKFAVEYADRQLQGDGFKFFHFMIDLNQGPCVIKRITGCGAGNEYLSVTPNGDIYPCHQFVGNEEFKMANIFDEEIVLPENLKNMFREAHVYTKEECKQCWNKFYCSGGCHANAINFNNDISKPYELGCEMQRKRTECSIMIQAKLMLEGATN
>NZ_CP019870.1|WP_004454132.1|970723_971221_+|gamma-carbonic-anhydrase-family-protein
MIRDYLEDKPLIDESVFVAKSADVIGNVKIGKDSSIWYNAVVRGDEGPITIGENTNIQDCSIVHGDTETIIGNNVTVGHRSIVHGCKISDNVLIGMGSIILDNAEIGEYTLIGAGTLITSNKKFPPGVLIMGSPGKVVRELTEEDKKYIDESYEWYLEAAQNQKY
>NZ_CP019870.1|WP_004454134.1|971518_973183_+|AarF/ABC1/UbiB-kinase-family-protein
MRISYRNLKRYREIGYVLIKYGFSFIVERLNIEGIAYKIPLFDPPEEIKNMTTGERMKRVLEELGPTYIKIGQILSTRKDLLDQDIIDEISKLRDDVEKFDSNIAIDIFKEEVGLSIEEIFLEFKEEPIAAASIGQVYEGVLKTGEEVIVKIQRPNIEKIIKSDLEILRTIANTLKDLKKDFNLDLVQMIEEFQTQLMRELDYTFEAINATKFSRIFKNSDEVYIPKVYSEYNTKKILVMEKVNGTKLSDVEKIRRLGYNTKTIVEIGVRSFFTQVLSHGFFHADPHPGNIFVIAKNKIAYIDFGMIGIIDNKTLNQLNEIALAGVEKNVDKIIYLLIEMDALNGEADIKGLRQDLLYLIHYYYDISIEKINVTDILNELFRFFRQYKIVMPAQFVTLAKTVITLEGTSRTLNTDFSFGSMGKEFMKHHYKSKFNPKNVVLSSRQNVEEILLDIKTIPKQLKAILKNIERNNIKMQIEDVKMTRLENCIIELTSQISLSLVLASIIVGSSLIIASPNIENNIWIKFTAIAGFFISFIIGLCLVIRSIRSKYKKD
>NZ_CP019870.1|WP_004454135.1|973195_975646_+|single-stranded-DNA-specific-exonuclease-RecJ
MKKWILKYKGKIEESEFSKKLNISPEICQILKNRGICTEKDSEIFMNPSLDYLRDPFLMKDMQKAVDRIKLAVEKNEKIWIYGDYDVDGVSSTSILCLYFKSIGYNVDYYIPNRLEEGYGINEDAIKLISSRGCDLIISVDCGITSVSEVNTANDLGIDVIITDHHECQSEIPSAFAVINPKQEDCNYPFDSLCGCGVAFKMIQALTPKEEFKTSMYNYLEIVTLATICDIVPLIDENRIIVKNGLKSMKEGKNIGLRELIKVCGVESDKIGSSHIGFAIGPRINASGRLGYSYLGVELFTTQSQEEAVEIASILEEKNNERQMIEAKMYHEAEEMLKSNSRYNDDKVLVLAKEGWQHGIIGIVASKLTEKYYKPTILLGIENGEATGSARSIKGFNIFEALIKCKDLMTKFGGHEQAAGLSLDSDNVEILANEINKFADYNLTEDDMIENVNVEFELQENVINLNLVEELHKLEPFGLNNPNPRFIVRNYILKDLKVIGKNQQHLKLSIEKEKSYECIGFNMSHLKSMYKVGDKVDVLFQLDENNYMGNRKVQFLLKDIRLARPKSASNDKLSLKLMSKIIPKDTQSLYNISVSDFELFDGNTDINIFDYFEKDTLIISNSINGFYRAMSDISLIDLDFNINYNIIEDVSKNTDKLELIFSPNIDKIDLKRYNNIILYDYLYNKGEYSYIYENKREESEIIKYYNKTDLLYLKNVVSNIVPSRDEFITIYKQALIKKEIDLDMVNIRETFNVIPLKFFTILNVFRELNLLDFNLNYEKNSVLIRILPKPQKKLDLNESLILNNLKNLEKQYNSSY
>NZ_CP019870.1|WP_003426450.1|975658_976171_+|adenine-phosphoribosyltransferase
MDLKNFIRNIDDFPKPGIDFKDVTTLFKDGDAFKYAVDSIVEELKDKDVDLVIGPEARGFLMGTPVAYALGVGFVPIRKPGKLPGEVESYEYGLEYGTDTLEIHKDAIKKGQKVAIVDDLLATGGTMEAAAKLVEKLGGEVVSMQFLIELKFLNGREKLSNYDVNSLIKY
>NZ_CP019870.1|WP_003422921.1|976244_978452_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MHDKELQEIIEKIKVYAPNANFEMVEKAYNLAKKAHEGQYRKSGEPYFIHPLAVANILIEMELDIETITAGLLHDVVEDTEYTYEDIKKEFGKEVADLVDGVTKLGQIKYRSKEETQSENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPEKAKYKAKETLEIYGGIAHRLGISKIKWELEDRALRFMDPEGYYDLVSRVSMKRSQREDYIQGIVELLKDKFKDLSIPCDVYGRPKHFYSIYRKMQKKHKTFEEIFDLTAVRILVDNVKDCYAVLGIVHTLWRPIPGRFKDYIAMPKPNMYQSLHTTVVGPDGEPLEIQIRTHEMHNIAENGIAAHWKYKEGISSKESKVEEKLQWLRQMMEWEKDLKDPQEFMDALKEDVFNSQVYVFTPKGDVIELPAESTPIDFAYRVHTNVGNKCVGAKIDGRIVPIDYKLQNGNIVEVLTSSNSNGPSRDWLNIVKTPNAKSRIRQFFKKERREENVDRGNTILEREFKKHDIPQKDPLVEKYMALVAKKFNQPSVEDLIATVGYGGIMSSQVVSKVKDLYLKEVKKAKKEQQIQEEDLNKHNISETEYSKKRKKNASQGIIVKGLDNILVRFAKCCNPLPGDEIVGYITKGRGVAIHRADCPNANNNGDFFQNRLVEVSWSSAGKGKFEAEIQIKAIDRRGIVNEITHIVAMDKLSLNGINARKGKDSIVSINLLVEVNDTEELKILMKKLKAIPGVESIYRMTN
>NZ_CP019870.1|WP_003426448.1|978476_978926_+|D-tyrosyl-tRNA(Tyr)-deacylase
MRAVVQRVSSSKVTVDENTIGQINKGLLVLLGVTHDDKSSDVDYMIDKILNLRIFEDENDKMNLSLMDIGGELLVVSQFTLYGDCRKGRRPGFSNAARPELANNLYEEFVKKAKDKGVTVGTGQFAAHMMVELTNDGPVTILLDSSKSF
>NZ_CP019870.1|WP_004454137.1|978940_979555_+|MBL-fold-metallo-hydrolase
MIIKKFVDSYFGVNTYVLGDEKTKKCAVIDPGGSLVETLSFVKENELNIEYIILTHGHGDHIGYVKDIKEKTGAKVVAHVDEKELLNDKNKNLSYTMRCGAQEFDADIYVNDKDKLELGELKMTFLHTPGHTQGCMCIRVEDEMFTGDTLFAGSIGRTDLYSGDFNQMEKSLKKLCKYEDAVRVYPGHGPTSTLGVEKKTNPYM

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Crispr_ID: NZ_CP019870_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_8

1022152-1022477

Orphan

Consensus_repeat	Method
ACAGGATGGCAAGAAATAGATGGTAA	CRISPRCasFinder

5 spacers

The CRISPR arrays of NZ_CP019870_8

>merge|NZ_CP019870|8|1022152-1022477|CRISPRCasFinder
ACAGGATGGAAAACAATTAATAACAAAAAATATTATTTAGGAACTGATGGAGCAAGAGTATCTGGATGGAAAGTAATAGACGGAAAAACTTATTACTTTAACTCAGATGGAGTAATGCAAACAGGATGGCAAGAAAAGAATGGAAAGAAATACTATCTAGGATCTGATGGTTTAGCAGTAACAGGATGGCAAGAAATAGATGGTAATAAGTATTACTTTGACAAAACAGGAATAATGCAGACAGGATGGCAACAAATAGATGGTAAGTCTTACTATTTAGACAAAGATGGAAAGATGCTAACTGGTTCTCAAAAAATAGATGGGAA

>NZ_CP019870|8|7|1022152-1022477|CRISPRCasFinder
ACAGGATGGAAAACAATTAATAACAA	AAAATATTATTTAGGAACTGATGGAGCAAGAGTA
TCTGGATGGAAAGTAATAGACGGAAA	AACTTATTACTTTAACTCAGATGGAGTAATGCAA
ACAGGATGGCAAGAAAAGAATGGAAA	GAAATACTATCTAGGATCTGATGGTTTAGCAGTA
ACAGGATGGCAAGAAATAGATGGTAA	TAAGTATTACTTTGACAAAACAGGAATAATGCAG
ACAGGATGGCAACAAATAGATGGTAA	GTCTTACTATTTAGACAAAGATGGAAAGATGCTA
ACTGGTTCTCAAAAAATAGATGGGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_004455027.1\|1014320_1016864_+\|SPOR-domain-containing-protein	unknown	unknown	gnl\|CDD\|173412
NZ_CP019870.1\|WP_004455016.1\|1029951_1031169_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340954
NZ_CP019870.1\|WP_014466379.1\|1019485_1020355_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP019870.1\|WP_004455014.1\|1033447_1034812_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|238623
NZ_CP019870.1\|WP_003431452.1\|1020378_1021392_+\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|177883
NZ_CP019870.1\|WP_004454162.1\|1006571_1007510_-\|delta-lactam-biosynthetic-de-N-acetylase	unknown	unknown	gnl\|CDD\|200572
NZ_CP019870.1\|WP_004454161.1\|1004826_1006200_+\|membrane-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_009890955.1\|1024663_1025545_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176125
NZ_CP019870.1\|WP_004455025.1\|1018967_1019288_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004455018.1\|1026884_1028807_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274912
NZ_CP019870.1\|WP_003421552.1\|1034990_1036334_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP019870.1\|WP_004455022.1\|1023592_1024456_+\|DUF3800-domain-containing-protein	unknown	unknown	gnl\|CDD\|173777
NZ_CP019870.1\|WP_004455019.1\|1025957_1026806_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP019870.1\|WP_004455017.1\|1028888_1029752_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|183585
NZ_CP019870.1\|WP_004455026.1\|1016986_1018978_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003426384.1\|1002641_1003346_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP019870.1\|WP_004455015.1\|1031404_1033270_+\|HIRAN-domain-containing-protein	unknown	unknown	gnl\|CDD\|214906
NZ_CP019870.1\|WP_011861651.1\|1036836_1037490_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP019870.1\|WP_004455028.1\|1012899_1013577_-\|sortase-SrtB	unknown	unknown	gnl\|CDD\|320675
NZ_CP019870.1\|WP_004454160.1\|1003338_1004661_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_004455027.1\|1014320_1016864_+\|SPOR-domain-containing-protein	gnl\|CDD\|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	0.000105937
NZ_CP019870.1\|WP_004455016.1\|1029951_1031169_+\|MFS-transporter	gnl\|CDD\|340954	cd17396, MFS_YdiM_like, Inner membrane transport protein YdiM and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily contains Escherichia coli inner membrane transport proteins YdiM and YdiN, which belong to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.54868e-158
NZ_CP019870.1\|WP_014466379.1\|1019485_1020355_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	4.54651e-174
NZ_CP019870.1\|WP_004455014.1\|1033447_1034812_-\|amidohydrolase	gnl\|CDD\|238623	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.	1.28909e-173
NZ_CP019870.1\|WP_003431452.1\|1020378_1021392_+\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|177883	PLN02240, PLN02240, UDP-glucose 4-epimerase.	0
NZ_CP019870.1\|WP_004454162.1\|1006571_1007510_-\|delta-lactam-biosynthetic-de-N-acetylase	gnl\|CDD\|200572	cd10948, CE4_BsPdaA_like, Catalytic NodB homology domain of Bacillus subtilis polysaccharide deacetylase PdaA, and its bacterial homologs. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. This family is represented by Bacillus subtilis pdaA gene encoding polysaccharide deacetylase BsPdaA, which is a member of the carbohydrate esterase 4 (CE4) superfamily. BsPdaA deacetylates peptidoglycan N-acetylmuramic acid (MurNAc) residues to facilitate the formation of muramic delta-lactam, which is required for recognition of germination lytic enzymes. BsPdaA deficiency leads to the absence of muramic delta-lactam residues in the spore cortex. Like other CE4 esterases, BsPdaA consists of a single catalytic NodB homology domain that appears to adopt a deformed (beta/alpha)8 barrel fold with a putative substrate binding groove harboring the majority of the conserved residues. It utilizes a general acid/base catalytic mechanism involving a tetrahedral transition intermediate, where a water molecule functions as the nucleophile tightly associated to the zinc cofactor.	2.70199e-111
NZ_CP019870.1\|WP_009890955.1\|1024663_1025545_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176125	cd08434, PBP2_GltC_like, The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold. GltC, a member of the LysR family of bacterial transcriptional factors, activates the expression of gltA gene of glutamate synthase operon and is essential for cell growth in the absence of glutamate. Glutamate synthase is a heterodimeric protein that encoded by gltA and gltB, whose expression is subject to nutritional regulation. GltC also negatively auto-regulates its own expression. This substrate-binding domain has strong homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.24492e-91
NZ_CP019870.1\|WP_004455019.1\|1025957_1026806_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	3.26864e-21
NZ_CP019870.1\|WP_004455018.1\|1026884_1028807_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|274912	TIGR03997, NADH:flavin_oxidoreductase, mycofactocin system FadH/OYE family oxidoreductase 2. The yeast protein called old yellow enzyme and FadH from Escherichia coli (2,4-dienoyl CoA reductase) are enzymes with 4Fe-4S, FMN, and FAD prosthetic groups, and interact with NADPH as well as substrate. Members of this related protein family occur in the vicinity of the putative mycofactocin biosynthesis operon in a number of Actinobacteria such as Frankia sp. and Rhodococcus sp., in Pelotomaculum thermopropionicum SI (Firmicutes), and in Geobacter uraniireducens Rf4 (Deltaproteobacteria). The function of this oxidoreductase is unknown.	1.73089e-143
NZ_CP019870.1\|WP_004455022.1\|1023592_1024456_+\|DUF3800-domain-containing-protein	gnl\|CDD\|173777	cd01027, TOPRIM_RNase_M5_like, TOPRIM_ RNase M5_like: The topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain found in Ribonuclease M5: (RNase M5) and other small primase-like proteins from bacteria and archaea. RNase M5 catalyzes the maturation of 5S rRNA in low G+C Gram-positive bacteria. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). The conserved glutamate may act as a general base in nucleotide polymerization by primases. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.	0.00109464
NZ_CP019870.1\|WP_004455017.1\|1028888_1029752_+\|shikimate-dehydrogenase	gnl\|CDD\|183585	PRK12548, PRK12548, shikimate dehydrogenase.	0
NZ_CP019870.1\|WP_003426384.1\|1002641_1003346_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.65233e-79
NZ_CP019870.1\|WP_004454160.1\|1003338_1004661_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.0866e-23
NZ_CP019870.1\|WP_004455015.1\|1031404_1033270_+\|HIRAN-domain-containing-protein	gnl\|CDD\|214906	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p. HIRAN is found as a standalone protein in several bacteria and prophages, or fused to other catalytic domains, such as a nuclease of the restriction endonuclease fold and TDP1-like DNA phosphoesterases, in the eukaryotes. It has been predicted that this protein functions as a DNA-binding domain that probably recognises features associated with damaged DNA or stalled replication forks.	1.08375e-17
NZ_CP019870.1\|WP_011861651.1\|1036836_1037490_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	7.15228e-16
NZ_CP019870.1\|WP_004455028.1\|1012899_1013577_-\|sortase-SrtB	gnl\|CDD\|320675	cd05826, Sortase_B, Sortase domain found in class B sortases. Class B sortases are membrane-bound cysteine transpeptidases broadly distributed in Gram-positive bacteria (mainly present in Firmicutes and Actinobacteria). They can have radically distinct functions. Some members of this group attach haemoproteins to the peptidoglycan of the cell wall, while others assemble pili, which are multi-subunit hair-like fibres that extend from the cell surface to promote microbial adhesion and biofilm formation. In transpeptidation reaction, the surface protein substrate is cleaved at a conserved cell wall-sorting signal (Class B sortases normally recognize the consensus NP[Q/K][T/S][N/G/S][D/A] motif), and covalently linked to peptidoglycan for display on the bacterial surface. The prototypical sortase B protein from Staphylococcus aureus (named Sa-SrtB) cleaves surface protein precursors between threonine and asparagine at a conserved NPQTN motif with subsequent covalent linkage to pentaglycine cross-bridges. It is required for anchoring the heme-iron binding surface protein IsdC to the cell wall envelope. SrtB contains an N-terminal hydrophobic region that functions as a signal peptide/transmembrane domain. At the C terminus, it contains an essential cysteine residue within the catalytic TLXTC signature sequence, where X is usually a serine. Genes encoding SrtB and its targets are generally clustered in the same locus. The prototypical class B sortase involved in pilus biogenesis is pilus-specific sortase C2 from Streptococcus pyogenes (named Sp-SrtC2) that anchors a surface protein containing a QVPTGV motif to the cell wall, as well as polymerizes the major pilin subunit Tee3/FctA and attaches the minor tip pilin Cpa. The linkage of Cpa to Tee3 by SrtC2 requires the VPPTG motif in the cell wall-sorting signal of Cpa. The family also includes SrtB enzymes from Bacillus anthracis (named Ba-SrtB) and Clostridium difficile (named Cd-SrtB). Ba-SrtB is thought to recognize the NPKTG motif, and attaches surface proteins to meso-diaminopimelic acid (mDAP) cross-bridges. Cd-SrtB does not play an essential role in pathogenesis. It cleaves short [SP]PXTG motif-containing peptides between the threonine and glycine residues and then covalently anchors the threonine residue to a nucleophile such as glycine or mDAP, but not to the peptidoglycan of C. difficile, suggesting a novel association of sortase activity with cyclic diGMP (c-diGMP)-mediated regulation to control levels of cell wall anchoring and secretion of putative adhesion molecules.	7.5369e-78
NZ_CP019870.1\|WP_003421552.1\|1034990_1036334_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	1.71633e-141

>NZ_CP019870.1|WP_003431452.1|1020378_1021392_+|UDP-glucose-4-epimerase-GalE
MAVLVAGGAGYIGSHTAIELLESGYEVVIVDNLSNSNSIVVDRIKELSKKPVKFYNIDIRNKDEMHVVFKENNIESIIHFAALKAVGESVEKPIEYYSNNLISTLNLFELMREYGVKKFVFSSSATVYGDPHTCPILEDFPLSVTNPYGRTKLMIEQMLVDISKADKSLDIALLRYFNPVGAHKSGRIGEEPNGVPSNLMPYITKIAVGKLKELSVYGNDYPTHDGTGVRDYIHVLDLAAGHVKALQKLEENPGLVVYNLGTGKGYSVLDLVKAFSKASGKEIPYKIVGRRAGDVAMCYADSSKAEKELGWKAKYELEEMCEDSWRWQSMNPNGYEE
>NZ_CP019870.1|WP_014466379.1|1019485_1020355_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MTVKKAIIPAAGLGTRFLPATKSQPKEMLPIVDKPTLQYIIEEAIESGIEEILIITGRNKKSIEDHFDKSVELELELEQKGKTEMLEMVRDISNMVNIHYIRQKEPKGLGHAIYCAKSFIGDEPFAVLLGDDIVDSDVPCLKQLIDTYNEYKTTVLGVQKIAKEDTNKYGILDVKHIEDRVYKVKDMVEKPAIEEAPSDIAILGRYIITPAIFSILEKQTPGKGGEIQLTDALQTLGKQEAIYAYNFEGRRYDVGDKIGFLEATIDFALKRENLKDDLMDYMRKKVSEK
>NZ_CP019870.1|WP_004455025.1|1018967_1019288_+|hypothetical-protein
MSSKYNVWTFNYEFLGLDSGDEKNNEVYYEIDLDEILNENYIDEDIDSGLDSDGNSILGELISEMDIDEDVSVDMTYQELEVDLEDLDSYLDEDIDSDIKGILDEI
>NZ_CP019870.1|WP_004455026.1|1016986_1018978_+|hypothetical-protein
MLKLGEKIIYELSDGFELSGISRYSKEYKKLHITNLGNIIISKSDEVNKDTGVKYIYSFSDNKEKLEAVLEDSQIIIYGNNLPFYIKSENSSKNVTANLTMKITLDEYDLICKSQREFIFYLKDNMTILSLDDNKFYMGGINKDNEKFIFISGKNRFEINFDDIERYILEDKRVSLKGYFHMEREGIIVRSVSIFNNNIDSVVPSDLNERVKDNQKIGNLPKDCEIVFCKISGNIDGFDYKNTNMLLVKYQDQLIFINKKSKKTIVKSAKDNCSKLNLGEDIILYDNKNVFNLHINDKNREIMQIDDLKDIENEIVGYTLKHAPFFIQEDFDSLTILKSFQKEIISIKNSDIKDIVINKELENENSNFVETEIKFNNQKVLLNLSKSMVQKLMQDVFIYAKQPLLKENSIEVIYKNWSKAMNDMIIFNFFGNIYYMKSEFDKILEKELNDEIRIEVINSLYKQIQEQRNNLDLLSAYMPRILENQEIDLFEKYNTKLDVQVFKQIKNLLSDLSYNISSYLNEVEKSLDNIIFVISGEDKKKYNYRMLKESESASLDVFLKQAISRLNHLVENMYPYYVDETSREMFKLFELLWKNYRNIDDDSIKEILFERITNTYVFKQLTLNNSTKERRKDIIEKIYNSVDYGTNKLDENMFFTGGIKYVK
>NZ_CP019870.1|WP_004455027.1|1014320_1016864_+|SPOR-domain-containing-protein
MKVLSENNIIRNTVLNVTASFLKQESKINEKLDGVLEKKFEKVEFNEAKYAELLKFNILFYKTLARNTEPLIGKWIVDKYIPEIDELEKDLELTTAKCRKYVNKAMKEGLDSLKANDLNSFLAYDKMELSERRRRLEKDYKVLNLYKDLLNISLRKISLEKKECGDLFLKNQADAKRELKREIIFCVNKILASNKDVVPNNVEENNEQDKVEIKATEIEDLQLGKDNSENDMLLNEIKNSKVKHESKSNDIESKFIDKLNSLNNESVSQTIHNEYKKLCGLEELHSVEGYGFGKEIIKDFACATVVLEFLKRRNRDLIEGAMRLTIIGEFGPENFKEFVDYVIKNKTEISEDTWNKAQNLIKDNYSELENHEIASKRTRRNKDIDIEEYIYMIKNADKDICFRSSISIEDDAEEGVKEEIDSNNQDIGDVVEDKDTTDKEYDSNKEDIIEPENKKSKKKAKLFGFIKKDNEEVEQEEENLNDISPDIILDKPVENHQVKSEEIEQNELKEIKQEEPSQHIEEERNVKIEKPINNNLDEKVSSNNESKLEKESKNLEDKKAKEIKEEKLENEKSVVIPIKKKENSNKKSKNSSKDKYRENKKEMKNYVSDKEDSLDDEEVVSKKSRLKETIIAVVIVVIVGVGYFITVGNNKKNDKENIPKSSTQQQANNKLTEEEKKAQAEKEKKEAEEKAKAEKEAQEKAQAEKKAKEMEAYKDGKGVYYTVYAGSLKVEKTAKETAKEYEAKGISSTIIQENGYYKIKIGDYSQYGEAQEKCNELAKKSIDTYIAMYDKYYDYKLEELKESAPSLSAEELKQKYEDLRSELKNKSGYREYVKHLDKLYEEIVEGA
>NZ_CP019870.1|WP_004455028.1|1012899_1013577_-|sortase-SrtB
MKKLYRIVINIILVLVILYSGFNIYSKLTKYNHDTKISSELQKKEYKKEDLSNINSDFKFWLSVENTNINYPVVQSKDNSYYLDKDFYKKDSISGTLFMDYRNKSIDDKNIIIYGHNMKNKTMFNNLNKFKDADFFKKNNKIKITLNGKEFLYDVFSAYIVESDYDYLKTNFNNESDYQNYINDITSKSLYKSPIKVNSNDKIVTLSTCTYEFDDARMVIHGRLI
>NZ_CP019870.1|WP_004454162.1|1006571_1007510_-|delta-lactam-biosynthetic-de-N-acetylase
MFRKVLHYLTLLSISIFFIVGCSNSQNNQNENQNKETQLQEDKEKIDSGKDTSNVIVSDGTDKPSKATTNNDDNKLDVSSLDNTTLDWFYIPNNKHKTPEVNTDIEFKFSDYDALYNGPTKDGQKTLYLTFDEGYENGYTTKILDTLKQNQVKAVFFVTTPYIKENKDLVKRMVSEGHIVGNHSKTHPSMPTKTSNLKNFNDELYDVEKLYKDVTGKDMVKFFRPPMGKYSEKSLAMTKNLGYKTVFWSFAYRDWDTDKQPSHEEATQKIMDNLHDGSILLLHAVSKTSTEILNDFISNARKLGYEFELLEY
>NZ_CP019870.1|WP_004454161.1|1004826_1006200_+|membrane-protein
MVLTGAHYIYILFMVIILITMIMKKDTIVPCILGVFFMGLFFEKNIFGAITAVFNSFIISLNELGPIILIIAIMVALSKALEANNAIQYMVRPFSRVIKNSNTAFFVTGFVMLVLSWFFWPTPAVALVGAVFLPVAMRAGLPAIGVAVALNLFGHGLALSTDFVIQGAPSITAGAAGVAVSYVINDGMILFWVMGIVTISMAFYTLKRDINKGMFREELKGFESEEVEEFNGKSKIATILVALGFLADIIAMYIFDLKGGDASALLGGTAVFLIIIINVINFGKDSLENVCENIIDGFVFGIKIFGAIIPIAAFFYMGEVAPLTGVFGKVLAPGSQGLLSDIGIALSQTIPLNKFAVSGIETVVGAITGLDGSGFSGISLVGSLASVFGTAINASVGALAALGQISGIWVGGGCLVPWGLISAAAICGVSPIELAKRNFVPVITGLVVTTIVAMFII
>NZ_CP019870.1|WP_004454160.1|1003338_1004661_+|HAMP-domain-containing-histidine-kinase
MINKIKPSKLGVILLIYVVISAAVAFILNIPFYSAVESIVKDVSEGKVYFKREVNQLMDNFQTYVNNNGIRADDGDDIAKWNSDNWFVSMKIYKGNKVFYDTLYYPNEVPDKSEENEFYSSPMARNYEIQFSDIKANIVVVALFRFRFQNFIEAISITFMALTFIITFLLLFSRKIKYLRKIEMGIKIVESGSLKYRIPVKGNDELSSLASSINEMSHTLENQLIKEREMKNKNKDIVTSISHDVRTPLTSVICYLDLIKDHKYNSPEQLEQYIKNVRSKAYQIKDLTDDLFTHFVNSGEEVSKGYEKINANEFIFQLLLDSSYTLEEKGFHITIENELYNQYHIYVDVTQFRRIFDNLCSNIIKYARKDKPIVFLIKVEDSKLLIIQKNRVSNFSKNVESFGIGIKNCEKIVAYHNGSINVNSDDKEFAIEISIPAKES
>NZ_CP019870.1|WP_003426384.1|1002641_1003346_+|response-regulator-transcription-factor
MNKEIPKKILVADDNPEIREIVEILLTGEGYEVIMATNGEEAVNLVDSTIDLIILDVVMPVKTGFVACNEIREKTTAPILFLTAKTQDSDKVIGFSAGGDDYLSKPFSYSELISRVKSLLRRYYIYQGKEKEREPNILKTKELCVNLDTQDVTLNGEPVFLTTIEYSILILMLKNRKKVFSSENLYETIWDEQYFYTANNTIMVHIRNLRKKLEKDQKNPQYIKTAWGKGYYID
>NZ_CP019870.1|WP_004455022.1|1023592_1024456_+|DUF3800-domain-containing-protein
MLSSYVKRVSKIIKKKYIMFIDESGRADINHEDPFTLTGVIFEYKYAVSQGDYVCSLRKEMDAFKEYCFGTSNIGIHLTDISRKSRAFEKFDDSQIKLFYDELPLFLSRLECTIISVTVDKARLKKYYAPSKEPYVVAFIHVLQNFYSFVNNETVESARIVIESRDDVSNLKVQKAFFDVFNNGTIYLDIDEELRDKVKGFIIAKKEDADYREGLEIADILCNPLSRARRGLIEANPKCMQYGEKNKIFKSVRNKIYTPTSVNDIRNWGFKEVPIVEPVGPWLEKMR
>NZ_CP019870.1|WP_009890955.1|1024663_1025545_-|LysR-family-transcriptional-regulator
MNLYHLRYFVTLAHLEHYTKAAENLSITQPSLSHAISLLENELGVALFEKEGRNIVLTKYGKIFLKDVEKSLEILDSSVKSLKITGTGEGQIDLAFLRTLGTDFIPDIVHKFLKSNPAKSIDFKFHTGVTTDIIQGLKERKYDIAFCSKLEKEKGIEFIPVAKQDLVLIVPYSHPLAAKDTIDLKETIPYPQIVFNQRSGLRYIIDDMFKKINQQPNIVYEVEEDQVIAGLVAKNFGIAVVPNMNMLSFTKVKVIQIIHPSWERNFYLAFIKDRYLPPAIKNFKNFVIKNAQL
>NZ_CP019870.1|WP_004455019.1|1025957_1026806_+|sugar-phosphate-isomerase/epimerase
MNNQKNLNIPITISSYTLGTEVSFRDRVRIAKEAGFDGIGLRAENYIDAKNAGVTDEEMIAILNEYDMKVTEVEYITQWGREEDRTEAQREKEQNVYHMAHLFNVKHINCGLLEMIPEEQIITALGELCDRAGELIIGLEFMPYSGVPDLATAWRVVKGCNRENAMLILDTWHWARAKQTAEDLAPVPADKIVSIQVCDVLETPYEKLRDESLHDRLAPGEGYGNTEEFVKIIKEHNISPRVIGAEVISDSLISKGLSTAAETVFNATKKVLDKAWSEVSPK
>NZ_CP019870.1|WP_004455018.1|1026884_1028807_+|FAD-dependent-oxidoreductase
MKISSMFTPIRIGSMTVPNRFVVPPMGNNFANTDGTLSETSKAYYLERALGGFGLITIESSVVDKKAKGGPRKPCLYDDSTIDSFKNVIDACHDAGSKVSIQLQHAGSEGNEKVAGHPLKAASAIPASNGRNTPLAITTEEIYELIESYGDAALRAQKAGADAVEVHCAHGYLVSSFISQRTNKRVDEFGGCFENRMRLPRLIIENIRKKVGNSLAILCRINSTDDVPGGIDVHDSSVIAAYLEDCGIDGLHVSRSIHIHDEYMWAPTTLHAGFSAELVTEIKKAVSIPVITVGRYTEPQFAELMVRQGRCDLVAFGRQSLADPEMPNKAKNGKLDEMIPCIACLQGCVPNMFQGKPIACLANPILGHEAELKPAEISKEVLVVGGGVGGMLAAWVCAKRGHNVTLVEKSEVLGGQMRLAAYPPGKGDITNLVRSYISKCNQYGVKICTNTEATVELIKEKSPDVVIIATGATPLVLPIPGINDSGLIHAVDLLDGKKSCGKKVLVVGGGMVGCEVAAFLGEQEHEVTVIELREEVGADVISEHRKFLMNDFENYNIHTITGAKVSKFYDDGVDYLLTDGTEHDLKGFDSVVLAMGSRNYDPLSEVIKEVVKETYIVGDAVKARRALDATKEAFEVALNI
>NZ_CP019870.1|WP_004455017.1|1028888_1029752_+|shikimate-dehydrogenase
MEISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNIKGANVTMPCKSAVTEYMDELSPAARIIGACNTIVNDNGKLVGHITDGVGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNPKDDFYKRAEQTVENIKKDVPECVVNLYDLEDTNKLYEEIQSSDILTNATLIGMKPYDNETNIKDTSVLRKDLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNELCFK
>NZ_CP019870.1|WP_004455016.1|1029951_1031169_+|MFS-transporter
MNNKKYYPTAIALYFSYFLLGIGISILGQYKPEFSSMWGAKTLSDGTLDVSIVLAVIAALGLGRLISYPFAGPISDKYGRKVSGLIGNFLHAIFFVGIVFSPNFYIAYVFAIIGGAANSFLDTCVTPSCMEIFASLGTIANMFTKFTIALAQFLLPFIIGFVAANSISFKVIFIVTAILIVVDAFLIAVLPFPPANNVIDNKGKTVKSEKMKFTPTSIALVCIGFTCTSTFVLWLNCNQELGKLYGMADPTKIQSFYSMGVICAVLITSLLIKKYIKPIRILVIYPIIALLMLLVVYFVQTPTICMLGGFVIGYSAAGGVLQLTTSTANEMFPTNKGKITSIVMIASSIANYVILNIAGIITKSGGVNGPKYVVLFNVAITFVGILLALFVNMRYEKEKVYDYDV
>NZ_CP019870.1|WP_004455015.1|1031404_1033270_+|HIRAN-domain-containing-protein
MENVFKRLQEFNGYDGYKESFEMNYLCIYESIPLREQVELANNLVDEILNMYKSESNEIYLLEGSNSKSLICYFEIFMKKINTLVKEMIIDEKWLYKLTKELIYKSKKVEYVKLGLVLSEKYLNVENLREVVDTFSKSGEYVFYLSNTIKKLEFYNTYLFNLSKKATGSIKVFAIVNMENLDSKINSYLIEDGYKDTKYERLLMNYIISIVDLNEYLEKRDLDKEKINNLARLICNYLLSVEFKYIGNKLELVNRFLPTVVNYGTNFESLYSIFLIAINVLKDENIECNKIEFEKEINGILLSEKWKNIYFEALRDASGKTEDIIKMSEIYDVNLSFDDLLPYLNRDIRDFEVYWHISKKGTTSSRLKLLNFFEETFKIDDLIGKMKDIEKDKLTQEYYDDMLFFIVLKGSKSLYPEGKNISLKGIFGNINEVRKESINILKRYREKLSLEELKIVKEAYEKEKNVILKDELRRVLYESNNLKKEFVNIEKIKVDEHGKDIYLTSIAVAGSRFRNREYLEKELEKSKIYYLTREKDNLYDEKAIKIVGETGYVIGYVPRKENYILSNLLDGGKLLYCRVTEYNLYEDCIYANVYLSYKDVIETVENSLKMVLDKSRIKLIN
>NZ_CP019870.1|WP_004455014.1|1033447_1034812_-|amidohydrolase
MSQLLIKNAYLITMNADREVYENGSILIENNIIKEVGKFDINIVDKDAEIYDAKGKILMPGLVNTHVHLSQQLGRGLADDVVLLTWLRERIWPYESSFNYEDSLISSTACCVELIKSGVTTFLESGGQYVDAMVEAVDKTGLRACLAKSVMDTGDGLPEAWQKTTDEEINTQLDLFHKFNNTSNERIKIWFALRTIFNTTEELLVRTKELADKYNTGIHMHIAEIADEISFVKQNNGVGTVEYLDKLGVLGPNLLAAHTVWLTHKEIDLFRLHDVKVSHDPGSAMKVVLGFASIPEMLEKGIPVSIGTDGAPSNNRMDLMRDMYLTSLIHKGRTLNPTVVPAEEVLEMATINGAKCALLEKEIGSLEVGKKADMIILNPDTIHCLPMHNPIGNIVYSMTSENVDSTICDGKWLMKERKVLVVDESELLNKVKKQASKIKDKAEVKIPSKFKIIK
>NZ_CP019870.1|WP_003421552.1|1034990_1036334_-|NCS2-family-permease
MVPNTNNVQPGGNNSSLSFLDKMFKFSERGSSLKTEVIGGVTTFLTMAYIVFVNPAILSEAGMDKAALITVTILATAIGTLIFAILGNAPFALAPGMGLNAFFTYSLVIGAGIPWQTGLGVVFLSGCVFFTLAVTGLRKTIADAIPRELAVASSAGIGLFLAFVGLKNMGVIIANPDTIVSLADFTPTVLIALFALILMAILEYKKVKGGILISIVVATIISVIFGFVELPTAIISTPPSIAPVAFKLDIVGALKFSLIGPIFSFMFIDMFDSLAFLITCCKQMGLEDENGEIKDLGRMLYADVSSTLIGSFLGTSTVTTFGESASGIAAGARTGLASIVTAALFLATLIFTPLLGIVPTYAAAPALVMVGVFMFESIKQIDFADSKIAVPAFVTVLLMPLTYSISIGLCFGFISYIIMHVVAKETDKISITLWIIGLLAVVNLVLS
>NZ_CP019870.1|WP_011861651.1|1036836_1037490_+|pentapeptide-repeat-containing-protein
MTKIIKVQKPKFTGELEIIENLEDILEDIFNDEKIFNKIIENEVISDLDSVRVSFESCIFRNVSFENCNLKKIDLLDVVFENCNLSNTFFDGGSIYRVEFKNSKLIGVRFDDCILKNVLFKDVLGKYSNFSFSKFKIVSILDSNFENSVFQEVKGDNLVFEYTNLKKANFNGTKLSGIDFTTNNIEGIEIGIDDIRGAIFDVSQAIDLTKLMGIIIK

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Crispr_ID: NZ_CP019870_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_9

1257179-1257737

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTATATGGAATGTAAATT	PILER-CR
GTTTTATATTAACTATATGGAATGTAAAT	CRISPRCasFinder
GTTTTATATTAACTATATGGAATGTAAATT	CRT

8 spacers

The CRISPR arrays of NZ_CP019870_9

>merge|NZ_CP019870|9|1257179-1257737|PILER-CR,CRISPRCasFinder,CRT
GTTTTATATTAACTATATGGAATGTAAATTTCATATTCCATGCATTCTGCTTACACTTAATAGAAAAGTTTTATATTAACTATATGGAATGTAAATTATTTCTAGCGACTTGGTCGGTTGCTCCATTTAGCTTGTTTTATATTAACTATATGGAATGTAAATTTTTTCAAATCTGATATATCGACCTTAAATTTCGTGGGTTTTATATTAACTATATGGAATGTAAATGATATAAACTTTGGGAGTTCAGAAGAAGGATTAAAAAGTTTTATATTAACTATATGGAATGTAAATTAGAGATGAACTCAGATAGAAAAACATGTAGATGTGTGTTTTATATTAACTATATGGAATGTAAATTCTTCAACAGTTGTGTTACCATCTCCTACACGCACAGGTTTTATATTAACTATATGGAATGTAAATTGCTACGTAACCAGTTTCACCGCTTTCAGTATATAACGTTTTATATTAACTATATGGAATGTAAATTGTTGGTATAGTTTCAGAAAAGAAATTCGAAACACTTGTTTTATATTAACTATATGGAATGTAAATT

>NZ_CP019870|9|2|1257179-1257737|PILER-CR
GTTTTATATTAACTATATGGAATGTAAATT	TCATATTCCATGCATTCTGCTTACACTTAATAGAAAA
GTTTTATATTAACTATATGGAATGTAAATT	ATTTCTAGCGACTTGGTCGGTTGCTCCATTTAGCTT
GTTTTATATTAACTATATGGAATGTAAATT	TTTTCAAATCTGATATATCGACCTTAAATTTCGTGG
GTTTTATATTAACTATATGGAATGTAAATG	ATATAAACTTTGGGAGTTCAGAAGAAGGATTAAAAA
GTTTTATATTAACTATATGGAATGTAAATT	AGAGATGAACTCAGATAGAAAAACATGTAGATGTGT
GTTTTATATTAACTATATGGAATGTAAATT	CTTCAACAGTTGTGTTACCATCTCCTACACGCACAG
GTTTTATATTAACTATATGGAATGTAAATT	GCTACGTAACCAGTTTCACCGCTTTCAGTATATAAC
GTTTTATATTAACTATATGGAATGTAAATT	GTTGGTATAGTTTCAGAAAAGAAATTCGAAACACTT
GTTTTATATTAACTATATGGAATGTAAATT

>NZ_CP019870|9|8|1257179-1257736|CRISPRCasFinder
GTTTTATATTAACTATATGGAATGTAAAT	TTCATATTCCATGCATTCTGCTTACACTTAATAGAAAA
GTTTTATATTAACTATATGGAATGTAAAT	TATTTCTAGCGACTTGGTCGGTTGCTCCATTTAGCTT
GTTTTATATTAACTATATGGAATGTAAAT	TTTTTCAAATCTGATATATCGACCTTAAATTTCGTGG
GTTTTATATTAACTATATGGAATGTAAAT	GATATAAACTTTGGGAGTTCAGAAGAAGGATTAAAAA
GTTTTATATTAACTATATGGAATGTAAAT	TAGAGATGAACTCAGATAGAAAAACATGTAGATGTGT
GTTTTATATTAACTATATGGAATGTAAAT	TCTTCAACAGTTGTGTTACCATCTCCTACACGCACAG
GTTTTATATTAACTATATGGAATGTAAAT	TGCTACGTAACCAGTTTCACCGCTTTCAGTATATAAC
GTTTTATATTAACTATATGGAATGTAAAT	TGTTGGTATAGTTTCAGAAAAGAAATTCGAAACACTT
GTTTTATATTAACTATATGGAATGTAAAT

>NZ_CP019870|9|3|1257179-1257737|CRT
GTTTTATATTAACTATATGGAATGTAAATT	TCATATTCCATGCATTCTGCTTACACTTAATAGAAAA
GTTTTATATTAACTATATGGAATGTAAATT	ATTTCTAGCGACTTGGTCGGTTGCTCCATTTAGCTT
GTTTTATATTAACTATATGGAATGTAAATT	TTTTCAAATCTGATATATCGACCTTAAATTTCGTGG
GTTTTATATTAACTATATGGAATGTAAATG	ATATAAACTTTGGGAGTTCAGAAGAAGGATTAAAAA
GTTTTATATTAACTATATGGAATGTAAATT	AGAGATGAACTCAGATAGAAAAACATGTAGATGTGT
GTTTTATATTAACTATATGGAATGTAAATT	CTTCAACAGTTGTGTTACCATCTCCTACACGCACAG
GTTTTATATTAACTATATGGAATGTAAATT	GCTACGTAACCAGTTTCACCGCTTTCAGTATATAAC
GTTTTATATTAACTATATGGAATGTAAATT	GTTGGTATAGTTTCAGAAAAGAAATTCGAAACACTT
GTTTTATATTAACTATATGGAATGTAAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_004454807.1\|1265510_1267061_+\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273925
NZ_CP019870.1\|WP_003416451.1\|1263477_1263858_+\|RidA-family-protein	unknown	unknown	gnl\|CDD\|129116
NZ_CP019870.1\|WP_004454813.1\|1259878_1261507_-\|aspartate-4-decarboxylase	unknown	unknown	gnl\|CDD\|163513
NZ_CP019870.1\|WP_003431027.1\|1264644_1265460_+\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|170086
NZ_CP019870.1\|WP_004454811.1\|1262165_1263383_+\|threonine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236182
NZ_CP019870.1\|WP_004454825.1\|1246316_1246955_-\|recombination-regulator-RecX	unknown	unknown	gnl\|CDD\|234646
NZ_CP019870.1\|WP_016728768.1\|1268640_1269399_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225080
NZ_CP019870.1\|WP_004454815.1\|1256734_1256893_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454809.1\|1264141_1264624_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|376324
NZ_CP019870.1\|WP_021361938.1\|1252586_1253255_+\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
NZ_CP019870.1\|WP_004454806.1\|1267157_1268510_+\|6-phospho-alpha-glucosidase	unknown	unknown	gnl\|CDD\|133434
NZ_CP019870.1\|WP_003431031.1\|1258762_1259758_-\|asparaginase	unknown	unknown	gnl\|CDD\|199208
NZ_CP019870.1\|WP_003416416.1\|1248609_1248960_+\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|376779
NZ_CP019870.1\|WP_004454804.1\|1269445_1270165_+\|transglutaminase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376628
NZ_CP019870.1\|WP_009897718.1\|1243345_1243987_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP019870.1\|WP_021373596.1\|1255070_1256441_+\|cell-wall-binding-protein-Cwp29	unknown	unknown	gnl\|CDD\|380277
NZ_CP019870.1\|WP_004454827.1\|1244160_1246164_-\|alpha-amylase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|215246
NZ_CP019870.1\|WP_003416411.1\|1247230_1247920_+\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NZ_CP019870.1\|WP_003431048.1\|1247920_1248493_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-YqeK	unknown	unknown	gnl\|CDD\|224627
NZ_CP019870.1\|WP_021362796.1\|1249313_1251734_+\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_004454807.1\|1265510_1267061_+\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273925	TIGR02005, PTS-IIBC-alpha, PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	9.14741e-102
NZ_CP019870.1\|WP_003416451.1\|1263477_1263858_+\|RidA-family-protein	gnl\|CDD\|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	6.43782e-69
NZ_CP019870.1\|WP_004454813.1\|1259878_1261507_-\|aspartate-4-decarboxylase	gnl\|CDD\|163513	TIGR03801, For_A_Pyridoxal-5-_Phosphate, aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1). [Energy metabolism, Amino acids and amines].	0
NZ_CP019870.1\|WP_003431027.1\|1264644_1265460_+\|PRD-domain-containing-protein	gnl\|CDD\|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	2.51602e-51
NZ_CP019870.1\|WP_004454811.1\|1262165_1263383_+\|threonine-ammonia-lyase	gnl\|CDD\|236182	PRK08198, PRK08198, threonine dehydratase; Provisional.	0
NZ_CP019870.1\|WP_004454825.1\|1246316_1246955_-\|recombination-regulator-RecX	gnl\|CDD\|234646	PRK00117, recX, recombination regulator RecX; Reviewed.	3.67554e-47
NZ_CP019870.1\|WP_016728768.1\|1268640_1269399_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225080	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism].	6.63826e-15
NZ_CP019870.1\|WP_004454809.1\|1264141_1264624_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|376324	pfam00358, PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.	2.68291e-57
NZ_CP019870.1\|WP_021361938.1\|1252586_1253255_+\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	1.40506e-18
NZ_CP019870.1\|WP_004454806.1\|1267157_1268510_+\|6-phospho-alpha-glucosidase	gnl\|CDD\|133434	cd05298, GH4_GlvA_pagL_like, Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP019870.1\|WP_003431031.1\|1258762_1259758_-\|asparaginase	gnl\|CDD\|199208	cd08964, L-asparaginase_II, Type II (periplasmic) bacterial L-asparaginase. Asparaginases (amidohydrolases, E.C. 3.5.1.1) are enzymes that catalyze the hydrolysis of asparagine to aspartic acid and ammonia. In bacteria, there are two classes of amidohydrolases. This model represents type II L-asparaginases, which tend to be highly specific for asparagine and localized to the periplasm. They are potent antileukemic agents and have been used in the treatment of acute lymphoblastic leukemia (ALL), but not without severe side effects. Tumor cells appear to have a heightened dependence on exogenous L-aspartate, and depleting their surroundings of L-aspartate may starve cancerous ALL cells. Type II L-asparaginase acts as a tetramer, which is actually a dimer of two tightly bound dimers. A conserved threonine residue is thought to supply the nucleophile hydroxy-group that attacks the amide bond. Many bacterial L-asparaginases have both L-asparagine and L-glutamine hydrolysis activities, to a different degree, and some of them are annotated as asparaginase/glutaminase.	8.27962e-141
NZ_CP019870.1\|WP_003416416.1\|1248609_1248960_+\|ribosome-silencing-factor	gnl\|CDD\|376779	pfam02410, RsfS, Ribosomal silencing factor during starvation. This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases.	7.43119e-49
NZ_CP019870.1\|WP_004454804.1\|1269445_1270165_+\|transglutaminase-domain-containing-protein	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	2.36815e-13
NZ_CP019870.1\|WP_009897718.1\|1243345_1243987_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.10482e-19
NZ_CP019870.1\|WP_021373596.1\|1255070_1256441_+\|cell-wall-binding-protein-Cwp29	gnl\|CDD\|380277	NF033435, S-layer_Clost, S-layer protein SlpA. In Clostridiodes difficile, the S-layer protein precursor, SlpA, is one member of a large paralogous family of protein that share several cell wall-binding repeats. SlpA is cleaved into a larger and smaller protein. The S-layer protein itself is important to adhesion, and portions of it are highly variable, and then N-terminal and C-terminal are well-conserved.	5.33351e-19
NZ_CP019870.1\|WP_004454827.1\|1244160_1246164_-\|alpha-amylase-C-terminal-domain-containing-protein	gnl\|CDD\|215246	PLN02447, PLN02447, 1,4-alpha-glucan-branching enzyme.	0
NZ_CP019870.1\|WP_003416411.1\|1247230_1247920_+\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	9.36329e-79
NZ_CP019870.1\|WP_003431048.1\|1247920_1248493_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-YqeK	gnl\|CDD\|224627	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism].	4.17724e-52
NZ_CP019870.1\|WP_021362796.1\|1249313_1251734_+\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0

>NZ_CP019870.1|WP_004454815.1|1256734_1256893_+|hypothetical-protein
MDNFLQGILASLSASLIVYIASKLFRKRKKPLKAATKSGWEFDLKIRFHKTK
>NZ_CP019870.1|WP_021373596.1|1255070_1256441_+|cell-wall-binding-protein-Cwp29
MKLKKLLSLGLVSMFVAGFPISANALDKIDKIQGADKYETAGIIADKQSYTTAILINADSTMADGLSASGLAGATNAPILLTKKNNIPNATLKRVEKAKKVYIIGGESSIDKATETFLKDKGIETRRLQGNDRIKTSYNVAKEINSINKVNKVILTNAFKGEPDAMSAAPVAVRDKAAIVLTDGKSVPFNTTGIESYAIGGTSSMSDSLVNDTNSTRLGGVDRYDTNKKIVNKFYNGAKEFYIASGTDLVYALVASPMAKNNPIVLVDIGSNKDILKNAAKVTGIGNLSDKIMLECENTINNISLPSSNKNIICGLKIDFDSNHIIWQDKGSYLECYDDNLEYYTEKYKDPTVPINIENTSTQNLDVTKLKVYGEANSTLYMGQYAKIKMDFNSFGVLKPGEKCTIYLDIISLDPSRSMTLTFSYVGDKENYKYEQGLASRILFYNPDGEDFFEYK
>NZ_CP019870.1|WP_021361938.1|1252586_1253255_+|VanZ-family-protein
METVTNNQSGVEIQLSLFEAIKDLLLINPIFLLGIILIGIFLVVIFKKNSDIPKVKTSILSLAMYYYLCLTLSHIVGIPTFSEYIRLSQLGETFFNPNINLIPFSDGFSLSFILNILLFVPLGFLCPLISKTFERLRNTFLIGFGLSLFIETIQLFTLHRATDIDDLLTNVIGTIIGYFCFKLIAKLRIVKLHSDDDSMEQDYTVCIPIAIIIVALILGFFS
>NZ_CP019870.1|WP_021362796.1|1249313_1251734_+|leucine--tRNA-ligase
MSVYNFKEVESKWQKIWKDNNQYKMDTAQTEKPNYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENAAIKHGIHPHKWTMENIEEMKEQLNLLGISYDWDKEVATSTPEYYRFTQEIFLKFLEHGLAYKKKSYVNWCPSCETVLANEQVVQGACERCKATVLKKDLEQWYFKTTEFAEELLNDLDILDGWPEKVKTMQKNWIGKSTGADLVFDIDGTDKSMTVFTTRPDTTYGVTYMVLAPEHELVKELVAGTEYEADVEAFVQKMHTMTEIERTAADVEKEGMFIGRYVINPLNGKKVPLWIANYVLVEYGTGAIMAVPAHDERDRDFAEKYNLDIIDVITEDNKMINSEEFNGLDASEGFEGIIDKLEKEGRGKRTINYRLRDWLVSRQRYWGCPIPVVYCDECGIVPVKKEDLPVLLPTDVEFTGKGESPLTTSKQFMSTTCPHCGKPARREVDTMDTFVDSSWYFLRYVDSNNENEPFSKELVNRWHPVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPFKNLLTQGMVLMDGSKMSKSKGNTVSPMDIIDEYGADTARLFVLFAAPPERDLDWSEQGVDGCFRFLNRVYRLVDELADVVKKDVEFGELNSQDKDMRYTIHSTLKKVTADLSEKFGFNTAISALMELINDMYKYKELDNINEAVIKEGVQTIVTIIAPFAPHLGEELWTMIGKEGSVFDIDWPKYDEKALVKDEIEVVVQVNGKVRGKLTVNSNISKDEMEKVALEDEKIKGLVEGKTIVKVVAVPKKLVNIVVK
>NZ_CP019870.1|WP_003416416.1|1248609_1248960_+|ribosome-silencing-factor
MTVEQMTKIAYDAIEDKLGQDTVIINIGKVSSLCDYFIITTASSQRQVKAIADNVEDELAKLGLEPRGKEGQGTQTWVLLDYGDIMVHVFNEENRGFYNLEKLWKDAPYIDIDTLA
>NZ_CP019870.1|WP_003431048.1|1247920_1248493_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-YqeK
MNLENINQRLNQMLPVGRLSHSKNVAKCAEKLCEIYGCDKEKAYLAGMIHDCAKYLSDKEIEDYVNKYEIYLDPIEDGNRSLSHSVIGAYICEYEFEVEDEDIINAIKYHTTGREDMSLLEKIIYIADLIEEGRKFPVVDTLRELAYGGKLDEALLTSFNNTLMFVINKKEEIHPRTVMARNYLIKEKLL
>NZ_CP019870.1|WP_003416411.1|1247230_1247920_+|nicotinate-nucleotide-adenylyltransferase
MRSENLVKMAELKNTEKLEKFNRHKGKIKIGILGGTFDPIHYAHLATAEFIRDKYDIDKIIFIPSGNPPHKLCITTDKYDRYNMTLLATESNEDFLVSKVEIERKKRTYTIDTLKYLKKKYKNADIYFITGADAICSVEEWKDVKKNFELATFIAATRPGISLLRSQETIEKLTKKYNADIITVYVPSLDISSTYIREQLNEGKSIRYLVPENVENYLYENKLYQYGDD
>NZ_CP019870.1|WP_004454825.1|1246316_1246955_-|recombination-regulator-RecX
MGIITKIEQQKRNDDRVNIYVDDKFFIAIFKELVYTFNLKKGNEINEEELKPILDDEMYIKAKNKALNILSHADQSEKKLKEKLSSEFDENIIERVIDFLKSYNLVNDSVLAQKIVNTNVNLNKCGKNRIKQNLYNKGINRSTINEAVSELDKDTEFENAMYLAKKRYERVKKEDKKKIYQKISQHLSYKGFDYDIIKRVLNKLLNFDEYDI
>NZ_CP019870.1|WP_004454827.1|1244160_1246164_-|alpha-amylase-C-terminal-domain-containing-protein
MKSQKRFKILDIDVYLQPFESDIKKRMKHYEDMKSKTLKNYKDFSSFANAHLYYGFHQTNDGFFYREWAPNADSLSLIGDFNNWNRKSHPLRKIGSGNWEIFIPGQNSLPHKSEVKVQVTANGKTFDRIPLYIKRVIQKDFGGFNGQIWQPKTPFIWTDNDFDLKNITSPLIYECHIGMSTESESIGTYNEFTEKILPKIKKAGYNTIQLMAIMEHPYYASFGYQVSNFYAISSRFGTPEDLKNLINTAHSMGIAVLLDLVHSHAVKNTLEGINEFDGSEHQFFHSGSKGNHPAWGTKLFNYGKPEVIHFLLSNIKFWLNEYHFDGFRFDGVTSMLYHNHGLGVSFDSYEKYFSMNTDIEAITYLQFANELMKEIKPNSISIAEDMSGMPGMCIPIKDGGIGFDYRLAMGVPDFWIKTISNLSDEDWDLGKMWYELTTRRPGEKNIGYCESHDQALVGDKTIIFWLADKEMYWNMEINSNNHVINRAISLIKLIKLITFSLAGEGYLNFMGNEFGHPEWIDFPREGNNWSYKYARRQWSLSEDNNLKYKQLLNFDKSMLELTKYSDIFIQNSHELIHMDNDKKILVYSKGKYLFIFNFHPNLIQSVDISKFQNTNYKTILNTDMVEFGGNTKKENLRDYDVYFSSTPPSSKMPIASRTAIVLLDNGI
>NZ_CP019870.1|WP_009897718.1|1243345_1243987_-|TetR/AcrR-family-transcriptional-regulator
MGRKKEPDNTIQKILDISHKLFLEKGYEQTTIQDIVDNLDGLSRGAIYHHFKSKDEIIKAITSRLYNDGFYGYEVKNDEGKTALEKLQYRLLHAYEQHNKQDIFLMSSSLLRNPKYLATQFDEIINDIVPWIKALIEEGNQDNSMEVKNPEIAAQMFGFLLNTWCIPTVYPGNPQQMIERFTLFGEQAAFMGISFMNDKIMCEYQKFVNKFSK
>NZ_CP019870.1|WP_003431031.1|1258762_1259758_-|asparaginase
MSIKKKVAIVFTGGTISMTVDDKVGAAIPTLSGEQILSMVTNIDKVADVEVFNFDEIPGPHITPYRMMELKNYVNDLLARKDITGVVITHGTDSLEETAYFLDLTIDNIKPVIVTGAMRSSSELGYDGSSNLSASVCTAVSKDAMGKGVLVVLNNEVLLASEATKTNTLSLNTFKSLTSGPLGIIDCNELVLTRDIVNRTIIDTDKVESKVALFKAYVGENADFIRFAVDSGYKGIVIEAMGRGNIPPQMLSGVEYAREKGLPVVIVSRCHSGRVFDSYGYFGSGRDLKNLGCIFGGDLPGQKARIKLILALGKTDNLDEIKDFFEKGIYC
>NZ_CP019870.1|WP_004454813.1|1259878_1261507_-|aspartate-4-decarboxylase
MKNHTYKEIKNIYGKISPFEFKDKLIDIAKYTAKENNRELLDAGRGNPNWTCSTAREAFFTFGHFAITETRSNWDLGHLAGMPQKKGIKERFFKFINENIDMPGAYLARDIINFGINELGFDGDEFVHELADGIIGDNYPLPDRMLPHMEKIVHDYLVQEMKYDISGKYGDVEIFAVEGATAAMCYIFDSLMANELLKKGDTIALMTPIFTPYLEIPNLPRYDFKVVNINANEVDEKGAHTWQYTKKELEKLRDKSIKALFVVNPNNPASIAMDETSCNNLIDVIENYNKDLMIISDDVYGTFVEDFSSLMSKLPYNTVGVYSYSKYFGVTGWRLGTFALHKKNVFDKKINDLTGELKKSVDKRYSDMSLNPSSLSFMERVVADSRLVALNHTAGLSTPQQVQMAFFSAFALIDKVDAYKKLNMSICHRRQKLLFEALELPINENKNNAAYYTQFDIEEWAKLNYGEDLFKFISKTASPVDVLYKLANDYSVVLLSGNGFYGPEWSIRISLANLYDEAYTKIGKAIREILNGYIVEWQKIKK
>NZ_CP019870.1|WP_004454811.1|1262165_1263383_+|threonine-ammonia-lyase
MMNVTLTDVKEARETIKNIVKRTDLLESVKLSEKTGANVFYKCENLQKTGSFKLRGACNKIASLTDEEKANGVIASSAGNHAQGVALGAKMTGIKSTIVMPATAPLAKVSATKGYGAEVVLNGAVYDDAYAKAVEIQKETRATFLHPFNDKYVIAGQGTISLEIFEQLDNKVDTILCPVGGGGIISGVAVAAKALNPNVKIVGVQTANIPSMKESIKNGKVTTAFNDTTIADGIAVKTPGDLTFEIINELVDEIVVVEETEIAESILFMMESQKIVSEGAGAVCTAAILSGKYVPAKDENVVCIISGGNIDINTLYRIIGVALAKEGRRYSFSTIMEDKPGNFAELTRIISENGGNILSANQGKLSAGEALGKQSAEFILETIDYDHIARIKKAIEEKGFKIIEL
>NZ_CP019870.1|WP_003416451.1|1263477_1263858_+|RidA-family-protein
MKHEVIHTNDAPAALGPYSQAIKAGNLLFVSGQVPLVPETMEVVEGDVQAQTAQSLKNLKAILAESGADFSNVVKTTVFIKDMNEFGAINEVYAEYFGENKPARACVEVARLPKDVKVEIEVIAVL
>NZ_CP019870.1|WP_004454809.1|1264141_1264624_+|PTS-glucose-transporter-subunit-IIA
MLNFFKKNKSYKLHAVVSGNSINIEKVNDSVFSKKLMGDGVAIIPNSNVVVAPCNGKVTVLTESKHAFGMVSDEGVEILVHIGIDTVSLQGEGFKNEVSQGDTVKKGSPIISFEREKINSQGIDCTTIIIVLNHSEFSEINCMVENEVVAGQDTVIEIMK
>NZ_CP019870.1|WP_003431027.1|1264644_1265460_+|PRD-domain-containing-protein
MRVVKIFNNNALSTVTNDRKEAILLGLGIGFNKRPGDKVNEDKIEKIYYVQDHMQTKFLELLKNVSPEVMDASQQIISLIPGNEGKFNNKGILSLVEHISFAIDRMKNNVFLPNLMLLDIKMMYSKEFELGVKALEIIYRVCHIHLPEDEAGYIALHFVNLQSNDNLAYDTLKFVKGSIDLIKECYGLELDESSLSTLRFRTHLKFLAQRIFKNEICQDDKMIEMYDYLINNHPKNKEYLEKLNVYIEKEFRYKLDKPEKIYLLLHLTKIL
>NZ_CP019870.1|WP_004454807.1|1265510_1267061_+|PTS-transporter-subunit-EIIC
MKEKLLGGLETFAKAMVQPLMYLSSAGILMVVGVLLTNDMLLGVLPFFKWEPIQIFGSLIYNCIMAIINNLAVIFAIGIPAALAKKEKHKAALIGFMSYIIYLTASNTMLTSLGQLAKESKMLGLIGTGQATILGIQVVDTSVFGGIILGCIAGYVFNRTSNKTFKGALQIYSGANFSFICMFFVSILIGVVSNFIWPLAQQGIASLANVIKDTGTFGLFLYGFLERILVPTGLHHLIYTPFQFSDLGGVLKVGADTVSGAYAIVMTEMNLPVERFSDSIYYMATGFTKMFGYIGIGAAFIYTAYKQNKKKVKATIIPLIITAVLASVTEPLDFMFVFCAPFLFFVHAVIAGLFIALLKIFDVTALCGGNLLVSIIMNTTVGVEKTHWPVMMILGLAQIIVYFVVFSFLIKKFNYKTPGREDESTATGEEQSKQLNLDAGIENIIDGLGGKENINTVENCITRLRVNVKDESKINEDIINLTPNSGIVRKGKDIQIIFGLHVHEVRRAVEDFLEAY
>NZ_CP019870.1|WP_004454806.1|1267157_1268510_+|6-phospho-alpha-glucosidase
MIITIVGGGSTFTPGIVKSIALREKELELEEIRLFDIDKERQDKVAVVVNWILKEDVKTDVKLTVTNCEKEAYTDATFIFAQMRVGKYEMREQDEKIPLKYGCVGQETCGCGGMAYGLRTIQPMIKVIDDVEKYAKKDYWILNYSNPAAIVSEACRKLRPNARIINICDMPIAIIDMIAGSLNINDVHNIRYDYFGLNHFGWFTSIDYKHRDLMEEIKEYIKENKILLPKSYIENLNKSRSTGNRHAVSSWIHVWESVYTMLESFPKYLPNTYLTYYLLSKETVEHSNINRTRANEVMESREKDLFEGVRHYLETGEISEKAFYAGSHGDWISDLAVSIKNDTRSRFLVITENRGAIPNMPYDAMVEIPAYIGKDGPEVIARGPIPLFQQGLMMQQLNSEKLIVEAYIENSYEKALQAFTLNKTIPSMNVAKEILDEMIEVNKEYWPELR
>NZ_CP019870.1|WP_016728768.1|1268640_1269399_+|helix-turn-helix-transcriptional-regulator
MNIINKIFWEEDRIGMITNNLEADTHSHCMLQLFLGIEDSIEITVNEKLVKCNCIIVDKNISHSFSARKKVYYSAIIEPTSIYAEQLTSKMNDFGYWICDNDGLEKLRQQGTFLIDNSSKEQYLRFMEMLNNYLNIPITLKHYDDRITELLNLLRTCNCDNHTISSFADKVSLSASRLSHLFKEQIGIPLKSYILFHQMECAFRELLSGKNVTEASMTAGFDTPSHFAGTVKRMMGMPVSLSLKDSEFLKVY
>NZ_CP019870.1|WP_004454804.1|1269445_1270165_+|transglutaminase-domain-containing-protein
MNKEYLEETKMLNYNEPQLKLLVSSKNWLELDDFHKIKSIYEFVQNDILFGYNASDMLSATQVLNDGMGQCNTKATLLMALLRAVNIPCRLHAFDVTKDFQRGATSKLISLLAPKYILHTWVEVFYQDRWIALEGVITDKKYLEAIQKKFFNHGGTFKKYAIATNDLKNTSIDWDGKDTFIQKEAIVYDYGIFPSPDVFFSTHSQHMSKLKNFIYVHLIRKIMTKNVCKARNNYIDKNE

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Crispr_ID: NZ_CP019870_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_10

1500847-1501926

Orphan

I-A

Consensus_repeat	Method
GTTTTAGATTAACTATATGGAATGTAAAT	PILER-CR
GTTTTAGATTAACTATATGGAATGTAAAT	CRISPRCasFinder
GTTTTAGATTAACTATATGGAATGTAAAT	CRT

16 spacers

The CRISPR arrays of NZ_CP019870_10

>merge|NZ_CP019870|10|1500847-1501926|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGATTAACTATATGGAATGTAAATATTACATGGGTAAAAATTTTGATGATTTTTATGACAGTTTTAGATTAACTATATGGAATGTAAATTGTATAGAATTAAGAATTTTTTTAATACTAATTATAGTTTTAGATTAACTATATGGAATGTAAATATTACATTTAATTTGCATTGCTTTGATGACTTCTTTGTTTTAGATTAACTATATGGAATGTAAATATTTTTCAATATCAATATAGAACTTTCATCTTTCCCGTTTTAGATTAACTATATGGAATGTAAATCAAGATATTTTTAATAAAATTTCTGAGCGAACTGTTTGTTTTAGATTAACTATATGGAATGTAAATGAGGAGATTCAGACAGCGACTAAAAAGACTGATATAAAGTTTTAGATTAACTATATGGAATGTAAATAACTTTATATCTCCATTTGCATATCCATCTGATGAACGTTTTAGATTAACTATATGGAATGTAAATGCGTACAAGGTTGAGAAGCTCCGCAATCTCAACGTCGTGTTTTAGATTAACTATATGGAATGTAAATATTTGAAAGGAATAAATTTTAAATGAATGAAAGGATAGGTTTTAGATTAACTATATGGAATGTAAATCAGCCAAAAACTTCGAATTTGAACTAAAATGCGTGGGTTTTAGATTAACTATATGGAATGTAAATTCTCATGACTATTGAATAAATATAATAAACAAGCATACGTTTTAGATTAACTATATGGAATGTAAATTTAGAATCAAAAGCACTTAATCCTAGTTCTTTCATAGTTTTAGATTAACTATATGGAATGTAAATAGCTTTTTAGCTTCGTCTACTACTTTATAAGCAAAGCGTTTTAGATTAACTATATGGAATGTAAATGATGAACAATAAAACAATCATCTAAAGACGAAGAAAGTTTTAGATTAACTATATGGAATGTAAATGTTCCTGTTGTGTTTTTTACTAATCCCATTTTATATGTTTTAGATTAACTATATGGAATGTAAATTGCTGTGATTTCACTAATAAAACAATTAATAATTGTGTTTTAGATTAATTATGTGGATTCAAAAT

>NZ_CP019870|10|3|1500847-1501861|PILER-CR
GTTTTAGATTAACTATATGGAATGTAAAT	ATTACATGGGTAAAAATTTTGATGATTTTTATGACA
GTTTTAGATTAACTATATGGAATGTAAAT	TGTATAGAATTAAGAATTTTTTTAATACTAATTATA
GTTTTAGATTAACTATATGGAATGTAAAT	ATTACATTTAATTTGCATTGCTTTGATGACTTCTTT
GTTTTAGATTAACTATATGGAATGTAAAT	ATTTTTCAATATCAATATAGAACTTTCATCTTTCCC
GTTTTAGATTAACTATATGGAATGTAAAT	CAAGATATTTTTAATAAAATTTCTGAGCGAACTGTTT
GTTTTAGATTAACTATATGGAATGTAAAT	GAGGAGATTCAGACAGCGACTAAAAAGACTGATATAAA
GTTTTAGATTAACTATATGGAATGTAAAT	AACTTTATATCTCCATTTGCATATCCATCTGATGAAC
GTTTTAGATTAACTATATGGAATGTAAAT	GCGTACAAGGTTGAGAAGCTCCGCAATCTCAACGTCGT
GTTTTAGATTAACTATATGGAATGTAAAT	ATTTGAAAGGAATAAATTTTAAATGAATGAAAGGATAG
GTTTTAGATTAACTATATGGAATGTAAAT	CAGCCAAAAACTTCGAATTTGAACTAAAATGCGTGG
GTTTTAGATTAACTATATGGAATGTAAAT	TCTCATGACTATTGAATAAATATAATAAACAAGCATAC
GTTTTAGATTAACTATATGGAATGTAAAT	TTAGAATCAAAAGCACTTAATCCTAGTTCTTTCATA
GTTTTAGATTAACTATATGGAATGTAAAT	AGCTTTTTAGCTTCGTCTACTACTTTATAAGCAAAGC
GTTTTAGATTAACTATATGGAATGTAAAT	GATGAACAATAAAACAATCATCTAAAGACGAAGAAA
GTTTTAGATTAACTATATGGAATGTAAAT	GTTCCTGTTGTGTTTTTTACTAATCCCATTTTATAT
GTTTTAGATTAACTATATGGAATGTAAAT

>NZ_CP019870|10|9|1500847-1501926|CRISPRCasFinder
GTTTTAGATTAACTATATGGAATGTAAAT	ATTACATGGGTAAAAATTTTGATGATTTTTATGACA
GTTTTAGATTAACTATATGGAATGTAAAT	TGTATAGAATTAAGAATTTTTTTAATACTAATTATA
GTTTTAGATTAACTATATGGAATGTAAAT	ATTACATTTAATTTGCATTGCTTTGATGACTTCTTT
GTTTTAGATTAACTATATGGAATGTAAAT	ATTTTTCAATATCAATATAGAACTTTCATCTTTCCC
GTTTTAGATTAACTATATGGAATGTAAAT	CAAGATATTTTTAATAAAATTTCTGAGCGAACTGTTT
GTTTTAGATTAACTATATGGAATGTAAAT	GAGGAGATTCAGACAGCGACTAAAAAGACTGATATAAA
GTTTTAGATTAACTATATGGAATGTAAAT	AACTTTATATCTCCATTTGCATATCCATCTGATGAAC
GTTTTAGATTAACTATATGGAATGTAAAT	GCGTACAAGGTTGAGAAGCTCCGCAATCTCAACGTCGT
GTTTTAGATTAACTATATGGAATGTAAAT	ATTTGAAAGGAATAAATTTTAAATGAATGAAAGGATAG
GTTTTAGATTAACTATATGGAATGTAAAT	CAGCCAAAAACTTCGAATTTGAACTAAAATGCGTGG
GTTTTAGATTAACTATATGGAATGTAAAT	TCTCATGACTATTGAATAAATATAATAAACAAGCATAC
GTTTTAGATTAACTATATGGAATGTAAAT	TTAGAATCAAAAGCACTTAATCCTAGTTCTTTCATA
GTTTTAGATTAACTATATGGAATGTAAAT	AGCTTTTTAGCTTCGTCTACTACTTTATAAGCAAAGC
GTTTTAGATTAACTATATGGAATGTAAAT	GATGAACAATAAAACAATCATCTAAAGACGAAGAAA
GTTTTAGATTAACTATATGGAATGTAAAT	GTTCCTGTTGTGTTTTTTACTAATCCCATTTTATAT
GTTTTAGATTAACTATATGGAATGTAAAT	TGCTGTGATTTCACTAATAAAACAATTAATAATTGT
GTTTTAGATTAATTATGTGGATTCAAAAT

>NZ_CP019870|10|4|1500847-1501926|CRT
GTTTTAGATTAACTATATGGAATGTAAAT	ATTACATGGGTAAAAATTTTGATGATTTTTATGACA
GTTTTAGATTAACTATATGGAATGTAAAT	TGTATAGAATTAAGAATTTTTTTAATACTAATTATA
GTTTTAGATTAACTATATGGAATGTAAAT	ATTACATTTAATTTGCATTGCTTTGATGACTTCTTT
GTTTTAGATTAACTATATGGAATGTAAAT	ATTTTTCAATATCAATATAGAACTTTCATCTTTCCC
GTTTTAGATTAACTATATGGAATGTAAAT	CAAGATATTTTTAATAAAATTTCTGAGCGAACTGTTT
GTTTTAGATTAACTATATGGAATGTAAAT	GAGGAGATTCAGACAGCGACTAAAAAGACTGATATAAA
GTTTTAGATTAACTATATGGAATGTAAAT	AACTTTATATCTCCATTTGCATATCCATCTGATGAAC
GTTTTAGATTAACTATATGGAATGTAAAT	GCGTACAAGGTTGAGAAGCTCCGCAATCTCAACGTCGT
GTTTTAGATTAACTATATGGAATGTAAAT	ATTTGAAAGGAATAAATTTTAAATGAATGAAAGGATAG
GTTTTAGATTAACTATATGGAATGTAAAT	CAGCCAAAAACTTCGAATTTGAACTAAAATGCGTGG
GTTTTAGATTAACTATATGGAATGTAAAT	TCTCATGACTATTGAATAAATATAATAAACAAGCATAC
GTTTTAGATTAACTATATGGAATGTAAAT	TTAGAATCAAAAGCACTTAATCCTAGTTCTTTCATA
GTTTTAGATTAACTATATGGAATGTAAAT	AGCTTTTTAGCTTCGTCTACTACTTTATAAGCAAAGC
GTTTTAGATTAACTATATGGAATGTAAAT	GATGAACAATAAAACAATCATCTAAAGACGAAGAAA
GTTTTAGATTAACTATATGGAATGTAAAT	GTTCCTGTTGTGTTTTTTACTAATCCCATTTTATAT
GTTTTAGATTAACTATATGGAATGTAAAT	TGCTGTGATTTCACTAATAAAACAATTAATAATTGT
GTTTTAGATTAATTATGTGGATTCAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_009897477.1\|1502116_1502269_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454605.1\|1493812_1494001_+\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP019870.1\|WP_004454568.1\|1506107_1506482_+\|BlaI/MecI/CopY-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367747
NZ_CP019870.1\|WP_009897457.1\|1507981_1510042_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340400
NZ_CP019870.1\|WP_004454601.1\|1494477_1494648_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454566.1\|1507093_1507786_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP019870.1\|WP_004454589.1\|1499310_1499463_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454606.1\|1493300_1493651_-\|DUF3796-domain-containing-protein	unknown	unknown	gnl\|CDD\|372251
NZ_CP019870.1\|WP_004454578.1\|1503254_1503416_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454587.1\|1499656_1500580_+\|SHOCT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378276
NZ_CP019870.1\|WP_004454608.1\|1493098_1493299_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224393
NZ_CP019870.1\|WP_004454572.1\|1505039_1505240_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454570.1\|1505258_1505672_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_009897482.1\|1498713_1499037_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454574.1\|1504344_1504662_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454592.1\|1498423_1498678_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454597.1\|1496330_1496705_+\|BlaI/MecI/CopY-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367747
NZ_CP019870.1\|WP_003423177.1\|1505655_1505889_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224393
NZ_CP019870.1\|WP_004454599.1\|1495036_1495525_-\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|225076
NZ_CP019870.1\|WP_004454576.1\|1503744_1504209_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_004454605.1\|1493812_1494001_+\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00993054
NZ_CP019870.1\|WP_004454587.1\|1499656_1500580_+\|SHOCT-domain-containing-protein	gnl\|CDD\|378276	pfam09851, SHOCT, Short C-terminal domain.	1.06395e-06
NZ_CP019870.1\|WP_004454608.1\|1493098_1493299_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	9.418e-19
NZ_CP019870.1\|WP_004454568.1\|1506107_1506482_+\|BlaI/MecI/CopY-family-transcriptional-regulator	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	4.66936e-20
NZ_CP019870.1\|WP_009897457.1\|1507981_1510042_+\|sensor-histidine-kinase	gnl\|CDD\|340400	cd16923, HATPase_VanS-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Enterococcus faecium VanS. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Enterococcus faecium VanS HK of the VanS-VanR two-component regulatory system (TCS) which activates the transcription of vanH, vanA and vanX vancomycin resistance genes. It also contains Ecoli YedV and PcoS, probable members of YedW-YedV TCS and PcoS-PcoR TCS, repectively. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); most also have a HAMP sensor domain.	3.43663e-42
NZ_CP019870.1\|WP_004454566.1\|1507093_1507786_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.68718e-78
NZ_CP019870.1\|WP_003423177.1\|1505655_1505889_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	1.08383e-19
NZ_CP019870.1\|WP_004454597.1\|1496330_1496705_+\|BlaI/MecI/CopY-family-transcriptional-regulator	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	2.10171e-07
NZ_CP019870.1\|WP_004454606.1\|1493300_1493651_-\|DUF3796-domain-containing-protein	gnl\|CDD\|372251	pfam12676, DUF3796, Protein of unknown function (DUF3796). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.	2.99688e-34
NZ_CP019870.1\|WP_004454599.1\|1495036_1495525_-\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	3.91004e-13

>NZ_CP019870.1|WP_004454587.1|1499656_1500580_+|SHOCT-domain-containing-protein
MVGAFVLPNYAIILSEMSNLWGNFIMWILVPIITIVLLIIAVSSMQYILVMIAFLLIIYSFIEKKIVMGLVSVLFFTYSIYLCATWEDKSLIADNKVETVRAQRETVEREKEMERRRIQEEVDKERYIEKHGMEISENDLKVKLEALVPQEYKGKKYELKVGKFKRYSMYFDLTVQNEKFSNSEECKKFVKEIANDLKKIKISKAYFKFHSKDDGGIYNSVYIDYFRNIQNNVDNVENLEFNEFELKTEEEEKREQEKIEQEKNSYNNYIQNRVVDPLDRIKKLKELLDSGAITQEEYNKKKKELLE
>NZ_CP019870.1|WP_004454589.1|1499310_1499463_+|hypothetical-protein
MDNFLFNVLASVTASYIVYLISKLIKKVKSHSTAKSDLKIDINFKYHRKK
>NZ_CP019870.1|WP_009897482.1|1498713_1499037_+|hypothetical-protein
MARDVFSVKMTPLEAQKMVEKNLEADLVSVDIYNLENNKSIIVTIFEKYYARSNSDAGLVVICENTTGKTLVKITSTGSAIGLFQIDWGTGNNLIKRVKKILIDYII
>NZ_CP019870.1|WP_004454592.1|1498423_1498678_+|hypothetical-protein
MENKDIKLTICIFAFVIGIIVLFCCIGLGQFNMDCIIKQNGGSIATEQYNIYLEQSISQYRNFGSILVLLGGIGILFDKSVRKY
>NZ_CP019870.1|WP_004454597.1|1496330_1496705_+|BlaI/MecI/CopY-family-transcriptional-regulator
MKEEILIEKLLRAELIVMEYLWKKDTLMPKKEIVKEIKQIYGWHKSTIKILLKRLVAKRYLARYIINSQSHYKIIDSKEYYTFKKKVLKSSKSIKIMRSLTTTHKNVSKEKLDLLDEYYRNLKE
>NZ_CP019870.1|WP_004454599.1|1495036_1495525_-|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MKNKKGFTLVELLVVIAIIGILAIVALPALFKNIEKAKIAKLEADISAIKSASLSYYADESKYTEGNIIWWTKKDGKITVNSGIGDEDPLAHKIENLGMPYNGSYTLVSSNGSEEYLELNIIIDGEISKSGLDKLEEDYGSSIKIPNDKNMIITFLSNKSDN
>NZ_CP019870.1|WP_004454601.1|1494477_1494648_-|hypothetical-protein
MHVYQPKTSEYLLNTSAKSYLSSIVFLFDYITKNESRYAFFIIDFPFLSLDIFYKF
>NZ_CP019870.1|WP_004454605.1|1493812_1494001_+|transposase
MTKYDFNFKLKVAKFYLNREGRDILIVKQYGVYDHSQVERWVNILGESELKIKKFSILYGSS
>NZ_CP019870.1|WP_004454606.1|1493300_1493651_-|DUF3796-domain-containing-protein
MIQKKFFMGFCGFLGFLSLRYFSSGNVADLTYIGFFAFFSNFIIAKINGDKADERYVQDEKAAMAFTGQLAIIELFILWCITIVSRNIELMCVLLSITYAITLNVYAIKLYILEEK
>NZ_CP019870.1|WP_004454608.1|1493098_1493299_-|helix-turn-helix-transcriptional-regulator
MPKFTCNLKKYRQLKELTQEQLAEKVGVRRETIMRLEAGKYNPSLKLAIDISKIVDTPIDELFIFD
>NZ_CP019870.1|WP_009897477.1|1502116_1502269_+|hypothetical-protein
MKNRRKDKRGFSVLLDKEKLDKFDEVLEEKNLTKKEWLEEKIDEELEQKE
>NZ_CP019870.1|WP_004454578.1|1503254_1503416_+|hypothetical-protein
MCENLLDNMYIEKRKEEYRIKLLKIRETDIDIYNKLESIVYKLSEKKLEKNNK
>NZ_CP019870.1|WP_004454576.1|1503744_1504209_-|hypothetical-protein
MDFGEVKSELSDKDLKDNEEALNKYKKYYLKVYKYYSEMDSIKSIQDIEIEQSRLKGQLQKNSNPIFALYISIMAVVFSTTINLTFDLSDITNYFIRMIMTLLFIVLLIFLVNKGILPIAIPYRNNIQFYTTALDVLEDMKKKILRERKYKKRR
>NZ_CP019870.1|WP_004454574.1|1504344_1504662_-|hypothetical-protein
MDFGNINLILIGIIVIIGTTIIYLIKPKTAFCSKKYFNKLESIYGNIDKKKTVKLEVLYRYVTGLEYIAIGLFTRRLDITILAIILVAIITTALYYLIRKKYITI
>NZ_CP019870.1|WP_004454572.1|1505039_1505240_-|hypothetical-protein
MYFKTYILKREVNNKQLEITRSFDLDNLICTATEILEDIEIDLIIIDEKNNVVWRNEKNTPAHENA
>NZ_CP019870.1|WP_004454570.1|1505258_1505672_-|hypothetical-protein
MKVKSKRSFIVGIIVCMLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVEELHDSADERDLYLTMKTSHILVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEIFLFVAYLLINIFLEKKE
>NZ_CP019870.1|WP_003423177.1|1505655_1505889_-|helix-turn-helix-transcriptional-regulator
MKTKVREFRTNMGLTQQQLADLVHVSNRTIISIEKEQYSPSLMLAYRMAQVFGTTIEELCCLKENKEMEDKKHESKE
>NZ_CP019870.1|WP_004454568.1|1506107_1506482_+|BlaI/MecI/CopY-family-transcriptional-regulator
MKISKLPEAELKVMRYICEANKVLTSRELVAAMEEKYEWNESTTFTVLKRLERREFLSTEKIGKLTHYNILVKEKKYLRFETKEFLKNIHKNSISSLMSALHGEDDEVDEDKLSELEEYFKNLK
>NZ_CP019870.1|WP_004454566.1|1507093_1507786_+|response-regulator-transcription-factor
MYNILVVDDDKEIVDSIEIYLKSEGFKIYKAYDGMKALEIITENDIHLILMDIMMPKLDGIKATVKIREERNIPIILISAKSEDTDKIIGLNIGADDYITKPFNLLELIARVKSNLRRYVTLGNYEDTCKEILKSGALELNTLTKEVKIDGENIKMTPIEYKIIELLLENKGRVFSIDEIYEKVWNEESFNSENTVAVHIRRIREKIEINPKEPRFLKVVWGVGYKIEKF
>NZ_CP019870.1|WP_009897457.1|1507981_1510042_+|sensor-histidine-kinase
MEKYRVLKLVSLIIISISFPLTILLVTIGLAEPKYNIQKTSTKSGIFDISDDFYDSNIFDEGTMASLLPKFKLSVGGKLTSKEKGKFQQEGKSIDLSSSDSEYDKIMINEQASEEYLSYLKNIKVYVINTYTGVFYTNTSYASLYDFKQKTKSYCNVEIINKIGKSSYIKTINGEKFELNNLSLELNEVDEGFEAYVSFPEEPTIEDGIVYTNFQIFKQATEKVRLFFVASLSLAIICLLSIILYIKIKGEVLKRNNVFLLIYSKIPMEFNVILVSISIAILTIYALAVSYHIDVIALVSLSLLIVSNNIFFINVQLSYLENKMCIFKTSIIVRVILWLIKTVREVSNAIKKVSLARKVIVIVIISLALIMVISTRSIGMGLLFSICIFLGFTIYITKRLSYLSYVIEGTERIKKGELDYKIKITGNDNFTSLAENINNIGEGLDRAIEEQVKSERMKSDLITNVSHDLKTPLTSIINYVDLIKKEESIQPEYINDYINVLESKSKRLKLLIEDLFEASRVSSGNIELQISKIDLVQLLRQSIGELEEKLSKNNLYLKLNVPNDKVYIWADGRRMYRVFENLLSNIAKYSLEETRVYIDVYDYGENVKVTMKNISSYELNFDPSEIMERFKRADESRNTEGSGLGLAIARDLVALQGGKFYIEIDGDLFKANLEFQKYEEEITNME

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Crispr_ID: NZ_CP019870_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_11

1851001-1852212

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTATATGGAATGTAAAT	PILER-CR
GTTTTATATTAACTATATGGAATGTAAAT	CRISPRCasFinder
GTTTTATATTAACTATATGGAATGTAAAT	CRT

18 spacers

The CRISPR arrays of NZ_CP019870_11

>merge|NZ_CP019870|11|1851001-1852212|PILER-CR,CRISPRCasFinder,CRT
GTTTTATATTAACTATATGGAATGTAAATTTTCTTTTTGAAGTTGTTGACGCTCTTTTTCATCAGCGTTTTATATTAACTATATGGAATGTAAATACATCAAGACTATCTATATTATTAAGAGTAACTTTAGTTTTATATTAACTATATGGAATGTAAATCTAACTTGTTTCCCTCTAAAGCGTGTTTAGTAGGGTTTTATATTAACTATATGGAATGTAAATCTCTTTTGCGCAGAGTGGTTTTTTACTTGTCTAAATAGTTTTATATTAACTATATGGAATGTAAATTAAAGACCTTTTTTCATGTTGCACTCTAAAAATCTAAGTTTTATATTAACTATATGGAATGTAAATGATAAGGAATCTGAATATTAATAACACCAGAATCTCCGTTTTATATTAACTATATGGAATGTAAATCTACTAGCAGGAACATCAAAAGGAGGTTTAAAATCCGTTTTATATTAACTATATGGAATGTAAATACCAAAAGGAATGTTTATTTTTGACTTTGCTTATCAATTGTTTTATATTAACTATATGGAATGTAAATATACTTGGTCAATACATTTCAAAAGTTGCAACAGAACGTTTTATATTAACTATATGGAATGTAAATTTCCCTAATGCTCCATTTTCATTATAATCTGGTGTAGTTTTATATTAACTATATGGAATGTAAATGTAGGTGTCGGAGAGCTAGGAAACTATAGCATAATGGTTTTATATTAACTATATGGAATGTAAATCGTTCTTGGAATGCTAAAACTCGTCCTTCTTGGAATAAGTTTTATATTAACTATATGGAATGTAAATCTCCCAGGAGTACCGCTATAAAAATAAATCATACAATGTTTTATATTAACTATATGGAATGTAAATAATTTTTGAAATGCACTGAATACTCATTTATTACATCGTTTTATATTAACTATATGGAATGTAAATAGGAACAAATTGCTAAAAAATTAGGGGTTGGTTATTCGTTTTATATTAACTATATGGAATGTAAATCTGAGAAAGTTTTATTCTTTTTTAATGTTACAAATCGTTTTATATTAACTATATGGAATGTAAATAAATTATTCCCTAAAAAAAGTTTATTTCTTTCTACTAGTTTTATATTAACTATATGGAATGTAAATACAATACCCCCCTATTGCAATGCTTCATTAACTATTAGTTTTATATTAACTATATGTAATATAAAT

>NZ_CP019870|11|4|1851001-1852146|PILER-CR
GTTTTATATTAACTATATGGAATGTAAAT	TTTCTTTTTGAAGTTGTTGACGCTCTTTTTCATCAGC
GTTTTATATTAACTATATGGAATGTAAAT	ACATCAAGACTATCTATATTATTAAGAGTAACTTTA
GTTTTATATTAACTATATGGAATGTAAAT	CTAACTTGTTTCCCTCTAAAGCGTGTTTAGTAGG
GTTTTATATTAACTATATGGAATGTAAAT	CTCTTTTGCGCAGAGTGGTTTTTTACTTGTCTAAATA
GTTTTATATTAACTATATGGAATGTAAAT	TAAAGACCTTTTTTCATGTTGCACTCTAAAAATCTAA
GTTTTATATTAACTATATGGAATGTAAAT	GATAAGGAATCTGAATATTAATAACACCAGAATCTCC
GTTTTATATTAACTATATGGAATGTAAAT	CTACTAGCAGGAACATCAAAAGGAGGTTTAAAATCC
GTTTTATATTAACTATATGGAATGTAAAT	ACCAAAAGGAATGTTTATTTTTGACTTTGCTTATCAATT
GTTTTATATTAACTATATGGAATGTAAAT	ATACTTGGTCAATACATTTCAAAAGTTGCAACAGAAC
GTTTTATATTAACTATATGGAATGTAAAT	TTCCCTAATGCTCCATTTTCATTATAATCTGGTGTA
GTTTTATATTAACTATATGGAATGTAAAT	GTAGGTGTCGGAGAGCTAGGAAACTATAGCATAATG
GTTTTATATTAACTATATGGAATGTAAAT	CGTTCTTGGAATGCTAAAACTCGTCCTTCTTGGAATAA
GTTTTATATTAACTATATGGAATGTAAAT	CTCCCAGGAGTACCGCTATAAAAATAAATCATACAAT
GTTTTATATTAACTATATGGAATGTAAAT	AATTTTTGAAATGCACTGAATACTCATTTATTACATC
GTTTTATATTAACTATATGGAATGTAAAT	AGGAACAAATTGCTAAAAAATTAGGGGTTGGTTATTC
GTTTTATATTAACTATATGGAATGTAAAT	CTGAGAAAGTTTTATTCTTTTTTAATGTTACAAATC
GTTTTATATTAACTATATGGAATGTAAAT	AAATTATTCCCTAAAAAAAGTTTATTTCTTTCTACTA
GTTTTATATTAACTATATGGAATGTAAAT

>NZ_CP019870|11|10|1851001-1852212|CRISPRCasFinder
GTTTTATATTAACTATATGGAATGTAAAT	TTTCTTTTTGAAGTTGTTGACGCTCTTTTTCATCAGC
GTTTTATATTAACTATATGGAATGTAAAT	ACATCAAGACTATCTATATTATTAAGAGTAACTTTA
GTTTTATATTAACTATATGGAATGTAAAT	CTAACTTGTTTCCCTCTAAAGCGTGTTTAGTAGG
GTTTTATATTAACTATATGGAATGTAAAT	CTCTTTTGCGCAGAGTGGTTTTTTACTTGTCTAAATA
GTTTTATATTAACTATATGGAATGTAAAT	TAAAGACCTTTTTTCATGTTGCACTCTAAAAATCTAA
GTTTTATATTAACTATATGGAATGTAAAT	GATAAGGAATCTGAATATTAATAACACCAGAATCTCC
GTTTTATATTAACTATATGGAATGTAAAT	CTACTAGCAGGAACATCAAAAGGAGGTTTAAAATCC
GTTTTATATTAACTATATGGAATGTAAAT	ACCAAAAGGAATGTTTATTTTTGACTTTGCTTATCAATT
GTTTTATATTAACTATATGGAATGTAAAT	ATACTTGGTCAATACATTTCAAAAGTTGCAACAGAAC
GTTTTATATTAACTATATGGAATGTAAAT	TTCCCTAATGCTCCATTTTCATTATAATCTGGTGTA
GTTTTATATTAACTATATGGAATGTAAAT	GTAGGTGTCGGAGAGCTAGGAAACTATAGCATAATG
GTTTTATATTAACTATATGGAATGTAAAT	CGTTCTTGGAATGCTAAAACTCGTCCTTCTTGGAATAA
GTTTTATATTAACTATATGGAATGTAAAT	CTCCCAGGAGTACCGCTATAAAAATAAATCATACAAT
GTTTTATATTAACTATATGGAATGTAAAT	AATTTTTGAAATGCACTGAATACTCATTTATTACATC
GTTTTATATTAACTATATGGAATGTAAAT	AGGAACAAATTGCTAAAAAATTAGGGGTTGGTTATTC
GTTTTATATTAACTATATGGAATGTAAAT	CTGAGAAAGTTTTATTCTTTTTTAATGTTACAAATC
GTTTTATATTAACTATATGGAATGTAAAT	AAATTATTCCCTAAAAAAAGTTTATTTCTTTCTACTA
GTTTTATATTAACTATATGGAATGTAAAT	ACAATACCCCCCTATTGCAATGCTTCATTAACTATTA
GTTTTATATTAACTATATGTAATATAAAT

>NZ_CP019870|11|5|1851001-1852212|CRT
GTTTTATATTAACTATATGGAATGTAAAT	TTTCTTTTTGAAGTTGTTGACGCTCTTTTTCATCAGC
GTTTTATATTAACTATATGGAATGTAAAT	ACATCAAGACTATCTATATTATTAAGAGTAACTTTA
GTTTTATATTAACTATATGGAATGTAAAT	CTAACTTGTTTCCCTCTAAAGCGTGTTTAGTAGG
GTTTTATATTAACTATATGGAATGTAAAT	CTCTTTTGCGCAGAGTGGTTTTTTACTTGTCTAAATA
GTTTTATATTAACTATATGGAATGTAAAT	TAAAGACCTTTTTTCATGTTGCACTCTAAAAATCTAA
GTTTTATATTAACTATATGGAATGTAAAT	GATAAGGAATCTGAATATTAATAACACCAGAATCTCC
GTTTTATATTAACTATATGGAATGTAAAT	CTACTAGCAGGAACATCAAAAGGAGGTTTAAAATCC
GTTTTATATTAACTATATGGAATGTAAAT	ACCAAAAGGAATGTTTATTTTTGACTTTGCTTATCAATT
GTTTTATATTAACTATATGGAATGTAAAT	ATACTTGGTCAATACATTTCAAAAGTTGCAACAGAAC
GTTTTATATTAACTATATGGAATGTAAAT	TTCCCTAATGCTCCATTTTCATTATAATCTGGTGTA
GTTTTATATTAACTATATGGAATGTAAAT	GTAGGTGTCGGAGAGCTAGGAAACTATAGCATAATG
GTTTTATATTAACTATATGGAATGTAAAT	CGTTCTTGGAATGCTAAAACTCGTCCTTCTTGGAATAA
GTTTTATATTAACTATATGGAATGTAAAT	CTCCCAGGAGTACCGCTATAAAAATAAATCATACAAT
GTTTTATATTAACTATATGGAATGTAAAT	AATTTTTGAAATGCACTGAATACTCATTTATTACATC
GTTTTATATTAACTATATGGAATGTAAAT	AGGAACAAATTGCTAAAAAATTAGGGGTTGGTTATTC
GTTTTATATTAACTATATGGAATGTAAAT	CTGAGAAAGTTTTATTCTTTTTTAATGTTACAAATC
GTTTTATATTAACTATATGGAATGTAAAT	AAATTATTCCCTAAAAAAAGTTTATTTCTTTCTACTA
GTTTTATATTAACTATATGGAATGTAAAT	ACAATACCCCCCTATTGCAATGCTTCATTAACTATTA
GTTTTATATTAACTATATGTAATATAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_003435154.1\|1856107_1856665_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP019870.1\|WP_003435156.1\|1857810_1858620_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133409
NZ_CP019870.1\|WP_003435147.1\|1847551_1848268_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NZ_CP019870.1\|WP_003435150.1\|1852821_1852995_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003435153.1\|1855151_1855850_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|274612
NZ_CP019870.1\|WP_003428954.1\|1853435_1853651_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226181
NZ_CP019870.1\|WP_003435141.1\|1843952_1845245_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
NZ_CP019870.1\|WP_003435159.1\|1859331_1860657_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240548
NZ_CP019870.1\|WP_003424287.1\|1842741_1843935_+\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
NZ_CP019870.1\|WP_003435157.1\|1858711_1859335_+\|cytidylate-kinase-like-family-protein	unknown	unknown	gnl\|CDD\|379060
NZ_CP019870.1\|WP_003435155.1\|1857014_1857377_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP019870.1\|WP_003435146.1\|1846275_1847361_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP019870.1\|WP_009897202.1\|1852380_1852665_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003435136.1\|1839893_1841594_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003433003.1\|1838933_1839497_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003424273.1\|1849297_1850170_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP019870.1\|WP_009897209.1\|1845461_1846121_+\|lipoprotein	unknown	unknown	gnl\|CDD\|367360
NZ_CP019870.1\|WP_003424276.1\|1848325_1848904_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|377744
NZ_CP019870.1\|WP_003424290.1\|1841763_1842381_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003435151.1\|1853661_1854129_-\|DUF2975-domain-containing-protein	unknown	unknown	gnl\|CDD\|378586

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_003435156.1\|1857810_1858620_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133409	cd04782, HTH_BltR, Helix-Turn-Helix DNA binding domain of the BltR transcription regulator. Helix-turn-helix (HTH) multidrug-efflux transporter transcription regulator, BltR (BmrR-like transporter) of Bacillus subtilis, and related proteins; N-terminal domain. Blt, like Bmr, is a membrane protein which causes the efflux of a variety of toxic substances and antibiotics. These regulators are comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the C-terminal domains are often unrelated and bind specific coactivator molecules. They share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	4.99397e-39
NZ_CP019870.1\|WP_003435147.1\|1847551_1848268_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	1.65027e-98
NZ_CP019870.1\|WP_003435154.1\|1856107_1856665_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.92935e-09
NZ_CP019870.1\|WP_003435153.1\|1855151_1855850_-\|alpha/beta-hydrolase	gnl\|CDD\|274612	TIGR03502, lipase_Pla1_cef, extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae.	0.00246011
NZ_CP019870.1\|WP_003428954.1\|1853435_1853651_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|226181	COG3655, COG3655, Predicted transcriptional regulator [Transcription].	5.69774e-28
NZ_CP019870.1\|WP_003435141.1\|1843952_1845245_+\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	9.31692e-171
NZ_CP019870.1\|WP_003435159.1\|1859331_1860657_+\|MATE-family-efflux-transporter	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	1.51942e-95
NZ_CP019870.1\|WP_003424287.1\|1842741_1843935_+\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	8.79458e-175
NZ_CP019870.1\|WP_003435157.1\|1858711_1859335_+\|cytidylate-kinase-like-family-protein	gnl\|CDD\|379060	pfam13189, Cytidylate_kin2, Cytidylate kinase-like family. This family includes enzymes related to cytidylate kinase.	6.58495e-43
NZ_CP019870.1\|WP_003435155.1\|1857014_1857377_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.6346e-13
NZ_CP019870.1\|WP_003435146.1\|1846275_1847361_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.23342e-37
NZ_CP019870.1\|WP_003424273.1\|1849297_1850170_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.10432e-65
NZ_CP019870.1\|WP_009897209.1\|1845461_1846121_+\|lipoprotein	gnl\|CDD\|367360	pfam03154, Atrophin-1, Atrophin-1 family. Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.	6.21857e-06
NZ_CP019870.1\|WP_003424276.1\|1848325_1848904_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|377744	pfam06962, rRNA_methylase, Putative rRNA methylase. This family contains a number of putative rRNA methylases. Note that many family members are hypothetical proteins.	7.51313e-74
NZ_CP019870.1\|WP_003435151.1\|1853661_1854129_-\|DUF2975-domain-containing-protein	gnl\|CDD\|378586	pfam11188, DUF2975, Protein of unknown function (DUF2975). This family of bacterial proteins have no known function. These proteins are likely to be integral membrane proteins. The proteins contain a highly conserved glutamic acid close to their C-terminus.	2.72372e-06

>NZ_CP019870.1|WP_003424273.1|1849297_1850170_+|MurR/RpiR-family-transcriptional-regulator
MEETNEMKDSKHLISNIQSQYTRLSKGQKLIAQYILNNYDKVAFMTACKLGETVGVSESTVVRFANALGYSGYPKLQAALQELIKNKLTTVQRVEMAHDYSDDFAILNKVLKSDIDNIRSTLEEIDERAFKEASNKLLRARKIYILGMRSSFVVAQYLGFYLDIILDNVHIIRMDMGDAFEQIVRINEEDVIVAISFPRYSKKSYQIVNYAKEKGAHVISLTDSLFAPVASLADNTLLVKSNMASFVDSLVPALSISNALAISVGMKEKEDIKQHFDDLEQIWKRYSVYE
>NZ_CP019870.1|WP_003424276.1|1848325_1848904_+|methyltransferase-domain-containing-protein
MAYAKYLTKITDINKFYLENIINEGDIVIDATMGNGYDTRYLAEKVGEKGFVYAFDIQEEAIKSTRKKLEKEGYTDRVKLIFDGHEKMNQYIKEEVSCVLFNLGYLPRAKHSIITKPDTTLKAIKLSLEMLKENGVISIAIYTGHDGGQEEKDCIYNLVNNLNQDEFNVLESKFLNQVNNPPQLILIEKKKA
>NZ_CP019870.1|WP_003435147.1|1847551_1848268_+|rRNA-pseudouridine-synthase
MRINKYIASCGIASRRKAEEIILGGRIKVNGSVVKELSFNIDEEKDIVEFDNKKVKPSENYIYIVLNKPEGYITTVKDQFNRPSVIDILKDVRERVYPIGRLDYETSGLLILTNDGDLTYKLTHPKHEIDKTYVASVKGIISDDEIRQFETGLKIEDYTTAPAKIRVTKENKEKNYSVCEITIHEGRNRQVRKMCKAINHPVLNLRRISVGKIVLKDTKVGEYRYLTEDEIKYLKSIK
>NZ_CP019870.1|WP_003435146.1|1846275_1847361_-|AI-2E-family-transporter
MIIISKENIKYYLIVVFIGILFFKFINTPSDFISSIEGFLKFFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTLNRLINEMPMYTDYIDSFIEKNMSNIDFLKTLIPHIQHSLDNLLKEASNFVGKIPKNFLIYTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTARNKADNIIEFFRTTHDIFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIAMTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGVFLSVPIAAVVKTYVDKYIDNRLQ
>NZ_CP019870.1|WP_009897209.1|1845461_1846121_+|lipoprotein
MRGRVILLISILSIFLVGCSFNKKDEINLVEQGKTYLEKHNYKKAMESLSSALEEDSTNENARAMYMQAMRMSNMTEFEELKNYEGAIKELKLIEKIKNGSSVIKEEATKKKEELTKLEKEQNEAEEQRKKKAKDTAGEDRYRVESDARKSSYSGSSKNNKSSSKNNDKKSDSNKSDNNNSSSQNQEKPNNSNPTPAPTPQDTTGGSDSGGNSQNSNNQ
>NZ_CP019870.1|WP_003435141.1|1843952_1845245_+|diaminopimelate-decarboxylase
MKLHGTMTVNNDELYIGGVSCLELSKKYQTPLYVFDEALVRQNCREYVEYFKAREGKNKVAYAGKAFLPLYMCNLINEEQMCLDVVSGGELYTAYKSNFPMEKVFFHGNNKTKEEINMGLDLGVGKFVVDNFYELDLLEALCEDKGKTQEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLFRAIEKLSEYKNIKLVGLHAHIGSQIFDVEPYIDTVDIMMNLVKEIKEKFNIQLTEIDLGGGVGVYYSEGDKPKTIKEFCETIITKAETSCKELGIEVPTLVIEPGRSIVANAGSTLYTVGSIKDIKDVRVYVSVDGGMTDNVRPSLYQASYECSIVNKINHEAMNHVTIAGKCCESGDILIGDINIMDIKSGDILITTSTGAYGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQSYEDLLALEI
>NZ_CP019870.1|WP_003424287.1|1842741_1843935_+|aspartate-kinase
MSIIVQKYGGSSVADTEKIKSIAENIIERRKENPQMVIVVSAMGKSTDEYITLAKELSNEPSKRELDALMSTGEMISASLLSIALNALGCKAISYNAYQLNIKTSGLHGKSQIDDINVNRIKNSLDEGNVVIVTGFQGINEDGDVTTLGRGGSDTSAVALAVKLNGKCEIYTDVDGIYFTDPRKYSKASKLDEIEYEEMLELASLGAQVMHSRSIELAQKYGVEIYVGRTCGTEKGTYIRGGKDMKLEDKVITGLATSDDDSSITIKDFKAENISSLFEDIATIGISVDMISQTAPILDKISVSFTVPKEELGECKKIVSKYTDEEHVVIDNNITKFSLVGLGMKNTSGVAAKVFKIFNENGIMIKLITTSEIRITCAINSDDKQVAIEKIAEVFNI
>NZ_CP019870.1|WP_003424290.1|1841763_1842381_+|hypothetical-protein
MTNMEKEILLLISRVRCVTESQFRKIYGDQKRYNKKNFKKTLRKMCSEYTLKKYPCDVDYYNYKDLSYVYYLNGSKLFKGDDLIKALVGSELVVRINTAGCDVKRFYRNVSVDDVKYDLFIEYTDQFGNIKQVLVDVDLNNEIDISKYENLSKKIDKSTIPFFKVPNVLVVTPDNLSELNDLERYDNEYSINFIDLGLNKLFNCI
>NZ_CP019870.1|WP_003435136.1|1839893_1841594_+|hypothetical-protein
MKRYLKTYGVALIIVIIYAFIKLPVLRLDFTSLFSVGIIFFVVAGILDMMLDRNERASKMAKYNFSIAIALLVYIVVVPFITSTPVLHAKSYRELLGKVTESKFTDDISPVSVNDIRLVDEDMAMKLGDKKLGEVPAIGSVSKLGKFHIQNVDGELYWVAPLVHRDIIKWITSLSGTSGYVKVSASNPQDVQLVQEIDGKPIKIVYQPEAYLHQDLQRHLYIHGIVNVGMTDFTLEINDEGRPYWVVSLYEHKIGYGGANATGIATVDAETGKINVYDVKNTPKWVDRIQPQSFVTDQIKDWGVYVNGFLNSVISEKGVLVPTEGTSLVYGNDNRSYWYTGITSSGGDESTIGFMLVDSRTKEARLYKQPGATETAAMKSAEGNVQEKNYEATFPVMYNILGQPTYVSSLKDKAGLVKRVAFVSVEDYNVLGIGEDKNEALRNYKDALESKGNDLKLDNDLKDEVLEGTVTRISPDVRGGNTNYYVTLDSNKDIIFRATSKVSSELPLTQVGDKVKISYSKEESGVIEMSEFDNLNIANFEDKKAKEKTGTDENTDSKDSENQGNV
>NZ_CP019870.1|WP_003433003.1|1838933_1839497_+|hypothetical-protein
MNKVYIVTTYTGTILSYLIRNISKKLYTHVSISLNENLKPMYSFGRLNPRNPFIGGFVEENINQGLYAIRKNTVCRVYSLEVDNLQYENLYKNIKLISDYREDYYYDTMALIYLLMNIQRQSEYKYVCSNFVADMLEKSEIDILNKQAFEVTPNDFYNLSGLTLEYEGLLSEYNSRQHSYVSKIANI
>NZ_CP019870.1|WP_009897202.1|1852380_1852665_+|hypothetical-protein
MLVYNKSFYPNDIFPRLDFSKIKKQLKLIDNDLSDFGSICIIEKEHYTISVNSIGEINVYYDLEYENKVYRIVYEIEKLFKSQVGRFSISTYRN
>NZ_CP019870.1|WP_003435150.1|1852821_1852995_-|hypothetical-protein
MKRKLSTYFKGYILGLCIAFLLFTFILKKLIIENIIGIIIGTGIAFLLIYLFNKKRK
>NZ_CP019870.1|WP_003428954.1|1853435_1853651_-|helix-turn-helix-transcriptional-regulator
MAIVVNLDVMMAKRKISLKDLAEKIDITNANLSILKTGKAKAIRFTTLNEICKALDCQPGDILEYVEDEND
>NZ_CP019870.1|WP_003435151.1|1853661_1854129_-|DUF2975-domain-containing-protein
MITKFFSNILSVFLYFLLSLLGVAGIIFLCMIPMFLYDFSSDKVIALIARILYFSDYFIVILFLIFIINSTKYSPFVLENVKRFKVMGCCLLINTIIECINGYNLNTNNIRIFGTDSGGISPLMVISFIFALMCFVIAETFDKAIKIKEDNDLTI
>NZ_CP019870.1|WP_003435153.1|1855151_1855850_-|alpha/beta-hydrolase
MEKKYFEIHGVPSILWGNPSSKLYIYIHGQCGNKEEAEAFANIAVPHECQVLSVDLPEHGERKREKNSFNPWHVVPELVSIMEYAKCHWNQISLYANSIGAWFSMLSFEKENLRECIFVSPILDMQQLISNMMLWANVSEEQLKHELIIPTSFGHTLSWEYLQYVKQHPITQWNVPTKILYGKHDELTEIGVVEKFVEKFNCNLTIIENGKHWFNTPQELNSLYEWLNTLVK
>NZ_CP019870.1|WP_003435154.1|1856107_1856665_+|TetR/AcrR-family-transcriptional-regulator
MRVSREIVIQATSDIVNKDGLNKVSLKVIAEKLGIRTPSLYNHIESLDDLLLEVAHKGMREMNSQMIKAAIGNFGDTAIKCISIAYFNFIISNPGVYETIQWATWHGNNETLEIFDEYKSLLEKLILSCNLNTKNTGEVLNLIMSVLHGYSTLQLGKSLLSKEEAIKGLVDSIDTVLLGIHKKYD
>NZ_CP019870.1|WP_003435155.1|1857014_1857377_-|helix-turn-helix-transcriptional-regulator
MEIDYKAIGQRIKIARIKKGITQESVANIINMTPSHMSNVETGKTKVSLPTLIAIANALSVSVDTLLCDNVLSSKVIFEKEAKDIFSDCDEYEIRSLVELLKSAKTVIRKDREIRKQFEK
>NZ_CP019870.1|WP_003435156.1|1857810_1858620_-|MerR-family-transcriptional-regulator
MIKKLYKTSEFAELCGVKKHTLYHYDEIELLKPSITHENGYRYYTIDQFEKFNIISVLKKAGTPLEEIKQYLNDLDTNTFLNVLHRKLMDLQEEVKKIEKMCSMLRNVISTMEIHLNVNTEKIEIVNCEEEYLIATKIPEAVLTDEKTMLQGIGNHLQYCLLHDYNFHVGEIVLEKNIKQGIFRESYYYSLIKNKVDDERLFIKPKGNYAVMYHQGSYDSLYKTYQNMKNQLEEQGYHIVGNIYEEDLIDYLSEHNAENYIQKISMQVI
>NZ_CP019870.1|WP_003435157.1|1858711_1859335_+|cytidylate-kinase-like-family-protein
MKIITISREFGSGGRELGKQLADILNFDYYDKEIITAIARKKKIDENYVSYILENHGWRNVPLTMCTSFTNILSMQSMKTDLLIEQSNVINQIASTGKDCVIVGRNADILLKKYQPFNVFVCANMNFKIQRCIEKKLNNEHISKKELERKIREIDKNRARSREFFTSSLWGNQTSYHIIVNTSEWNIKHLSYAIANFSEYWFRRYEQ
>NZ_CP019870.1|WP_003435159.1|1859331_1860657_+|MATE-family-efflux-transporter
MIQLSDNFNYKRLLKFTFPTIIMLVISSIYGVVDGYFVSNFVGKTAFTAVNFIMPFLLILGCVGFLFGTGGGALIAKTMGEGKKEEANEQFSLLIVTSAGCGIILAVLGIVTMPWIASAMGADGQLLTDSILYGCVVIIAIPAYILQCEFQCLFATAEKPKLGLYVAIMAGITNIVLDALFITVFKWGLVGAALATAIGQYVGGIIPLLYFSRQNNSLLKFKKPKFDCDVLKKTVANGSSELMTNVSTSVVSMLYNAQLLKYAGEDGVASYGVLLYVALLFQAVFIGYSVGTAPIISYHYGAKNYDELKNLRKRSLIVIICFAVFMFIIGEFLSKPIAFIFVGYDNNLMEMTLRAFMIYSFSFLFSGFGVFGSSFFTALNDGLTSALIAFMRILVFQVVSVLIFPIFWGVNGIWFSIVGAEILATIMTAFFIIRKQKKYHY

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Crispr_ID: NZ_CP019870_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_12

2226341-2227556

Orphan

I-A

Consensus_repeat	Method
ATTTACATACCACTTAGTTAATATAAAAC	CRISPRCasFinder
ATTTACATACCACTTAGTTAATATAAAAC	CRT
GTTTTATATTAACTAAGTGGTATGTAAAT	PILER-CR

18 spacers

The CRISPR arrays of NZ_CP019870_12

>merge|NZ_CP019870|12|2226341-2227556|CRISPRCasFinder,CRT,PILER-CR
ATTTACATACCACTTAGTTAATATAAAACAAATTTCAAAGCGATTGGACAACGAATAAAAATTGCAATTTATATACCATATAGTTAATATAAAGCATATTTGTGTCGATATATAGTTCTAACTAAGTATAAGATTTACATACCTCATAGTTAATATAAAACACATATTTTACATGTTTGAAGATTTTATCAGAAACCCTATTTACATACCACTTAGTTAATATAAAACCAGAACTAATAGGAAAAGAAGGTTATACGCCAGAGATATTTACATACCACTTAGTTAATATAAAACTTGATATATTTTTTTATGGTACATATTTTAAAGTAAATTTACATACCACTTAGTTAATATAAAACTATGAGTAAAGTATTTACAGACTCTAAAGACTATGAAATTTACATACCACTTAGTTAATATAAAACGATGAATATCATAAGATGTTATGTAATTCATTATATGATTTACATACCACTTAGTTAATATAAAACCGGCAACAGATTTAATAAATATATGTGACCTTTTAGAATTTACATACCACTTAGTTAATATAAAACTCAGCTAGATTATTTAAATGATGCAGTCAAAGAATTATTTACATACCACTTAGTTAATATAAAACTAGGTCTTATATTTATTACTAATAAATTAAAACCTTAATTTACATACCACTTAGTTAATATAAAACTTTTTATCCAATCAAGATGTAGGTTCAACAGTAAATAATTTACATACCACTTAGTTAATATAAAACTTACTAATCTCTTTTTCTGTTAATGCTTTCAAAGTAATATTTACATACCACTTAGTTAATATAAAACAAAAATAGTGCTAAGTCAAGATATATAATAATAATAAATTTACATACCACTTAGTTAATATAAAACTTTTACCTTTTCAGAGTTTTATTTGTATTGTTGTGATTTACATACCACTTAGTTAATATAAAACTCTTTTAAAATTACTGTCTGTCTCCCTACTGAACTTGTATTTACATACCACTTAGTTAATATAAAACTTATATTTTATATAAAAGAGTGTCATATCTTTAATATATTTACATACCACTTAGTTAATATAAAACTCTATCAACCAATGCTACACCATAGGGAATTAGGAAAATTTACATACCACTTAGTTAATATAAAACTTGCTAGGCAATCCATTTTTAGAAAGTACTAAATTCTATTTACATACCACTTAGTTAATATAAAAC

>NZ_CP019870|12|11|2226341-2227556|CRISPRCasFinder
ATTTACATACCACTTAGTTAATATAAAAC	AAATTTCAAAGCGATTGGACAACGAATAAAAATTGCA
ATTTATATACCATATAGTTAATATAAAGC	ATATTTGTGTCGATATATAGTTCTAACTAAGTATAAG
ATTTACATACCTCATAGTTAATATAAAAC	ACATATTTTACATGTTTGAAGATTTTATCAGAAACCCT
ATTTACATACCACTTAGTTAATATAAAAC	CAGAACTAATAGGAAAAGAAGGTTATACGCCAGAGAT
ATTTACATACCACTTAGTTAATATAAAAC	TTGATATATTTTTTTATGGTACATATTTTAAAGTAA
ATTTACATACCACTTAGTTAATATAAAAC	TATGAGTAAAGTATTTACAGACTCTAAAGACTATGAA
ATTTACATACCACTTAGTTAATATAAAAC	GATGAATATCATAAGATGTTATGTAATTCATTATATG
ATTTACATACCACTTAGTTAATATAAAAC	CGGCAACAGATTTAATAAATATATGTGACCTTTTAGA
ATTTACATACCACTTAGTTAATATAAAAC	TCAGCTAGATTATTTAAATGATGCAGTCAAAGAATT
ATTTACATACCACTTAGTTAATATAAAAC	TAGGTCTTATATTTATTACTAATAAATTAAAACCTTA
ATTTACATACCACTTAGTTAATATAAAAC	TTTTTATCCAATCAAGATGTAGGTTCAACAGTAAATA
ATTTACATACCACTTAGTTAATATAAAAC	TTACTAATCTCTTTTTCTGTTAATGCTTTCAAAGTAAT
ATTTACATACCACTTAGTTAATATAAAAC	AAAAATAGTGCTAAGTCAAGATATATAATAATAATAA
ATTTACATACCACTTAGTTAATATAAAAC	TTTTACCTTTTCAGAGTTTTATTTGTATTGTTGTG
ATTTACATACCACTTAGTTAATATAAAAC	TCTTTTAAAATTACTGTCTGTCTCCCTACTGAACTTGT
ATTTACATACCACTTAGTTAATATAAAAC	TTATATTTTATATAAAAGAGTGTCATATCTTTAATAT
ATTTACATACCACTTAGTTAATATAAAAC	TCTATCAACCAATGCTACACCATAGGGAATTAGGAAA
ATTTACATACCACTTAGTTAATATAAAAC	TTGCTAGGCAATCCATTTTTAGAAAGTACTAAATTCT
ATTTACATACCACTTAGTTAATATAAAAC

>NZ_CP019870|12|6|2226341-2227556|CRT
ATTTACATACCACTTAGTTAATATAAAAC	AAATTTCAAAGCGATTGGACAACGAATAAAAATTGCA
ATTTATATACCATATAGTTAATATAAAGC	ATATTTGTGTCGATATATAGTTCTAACTAAGTATAAG
ATTTACATACCTCATAGTTAATATAAAAC	ACATATTTTACATGTTTGAAGATTTTATCAGAAACCCT
ATTTACATACCACTTAGTTAATATAAAAC	CAGAACTAATAGGAAAAGAAGGTTATACGCCAGAGAT
ATTTACATACCACTTAGTTAATATAAAAC	TTGATATATTTTTTTATGGTACATATTTTAAAGTAA
ATTTACATACCACTTAGTTAATATAAAAC	TATGAGTAAAGTATTTACAGACTCTAAAGACTATGAA
ATTTACATACCACTTAGTTAATATAAAAC	GATGAATATCATAAGATGTTATGTAATTCATTATATG
ATTTACATACCACTTAGTTAATATAAAAC	CGGCAACAGATTTAATAAATATATGTGACCTTTTAGA
ATTTACATACCACTTAGTTAATATAAAAC	TCAGCTAGATTATTTAAATGATGCAGTCAAAGAATT
ATTTACATACCACTTAGTTAATATAAAAC	TAGGTCTTATATTTATTACTAATAAATTAAAACCTTA
ATTTACATACCACTTAGTTAATATAAAAC	TTTTTATCCAATCAAGATGTAGGTTCAACAGTAAATA
ATTTACATACCACTTAGTTAATATAAAAC	TTACTAATCTCTTTTTCTGTTAATGCTTTCAAAGTAAT
ATTTACATACCACTTAGTTAATATAAAAC	AAAAATAGTGCTAAGTCAAGATATATAATAATAATAA
ATTTACATACCACTTAGTTAATATAAAAC	TTTTACCTTTTCAGAGTTTTATTTGTATTGTTGTG
ATTTACATACCACTTAGTTAATATAAAAC	TCTTTTAAAATTACTGTCTGTCTCCCTACTGAACTTGT
ATTTACATACCACTTAGTTAATATAAAAC	TTATATTTTATATAAAAGAGTGTCATATCTTTAATAT
ATTTACATACCACTTAGTTAATATAAAAC	TCTATCAACCAATGCTACACCATAGGGAATTAGGAAA
ATTTACATACCACTTAGTTAATATAAAAC	TTGCTAGGCAATCCATTTTTAGAAAGTACTAAATTCT
ATTTACATACCACTTAGTTAATATAAAAC

>NZ_CP019870|12|5|2226540-2227556|PILER-CR
ATTTACATACCACTTAGTTAATATAAAAC	CAGAACTAATAGGAAAAGAAGGTTATACGCCAGAGAT
ATTTACATACCACTTAGTTAATATAAAAC	TTGATATATTTTTTTATGGTACATATTTTAAAGTAA
ATTTACATACCACTTAGTTAATATAAAAC	TATGAGTAAAGTATTTACAGACTCTAAAGACTATGAA
ATTTACATACCACTTAGTTAATATAAAAC	GATGAATATCATAAGATGTTATGTAATTCATTATATG
ATTTACATACCACTTAGTTAATATAAAAC	CGGCAACAGATTTAATAAATATATGTGACCTTTTAGA
ATTTACATACCACTTAGTTAATATAAAAC	TCAGCTAGATTATTTAAATGATGCAGTCAAAGAATT
ATTTACATACCACTTAGTTAATATAAAAC	TAGGTCTTATATTTATTACTAATAAATTAAAACCTTA
ATTTACATACCACTTAGTTAATATAAAAC	TTTTTATCCAATCAAGATGTAGGTTCAACAGTAAATA
ATTTACATACCACTTAGTTAATATAAAAC	TTACTAATCTCTTTTTCTGTTAATGCTTTCAAAGTAAT
ATTTACATACCACTTAGTTAATATAAAAC	AAAAATAGTGCTAAGTCAAGATATATAATAATAATAA
ATTTACATACCACTTAGTTAATATAAAAC	TTTTACCTTTTCAGAGTTTTATTTGTATTGTTGTG
ATTTACATACCACTTAGTTAATATAAAAC	TCTTTTAAAATTACTGTCTGTCTCCCTACTGAACTTGT
ATTTACATACCACTTAGTTAATATAAAAC	TTATATTTTATATAAAAGAGTGTCATATCTTTAATAT
ATTTACATACCACTTAGTTAATATAAAAC	TCTATCAACCAATGCTACACCATAGGGAATTAGGAAA
ATTTACATACCACTTAGTTAATATAAAAC	TTGCTAGGCAATCCATTTTTAGAAAGTACTAAATTCT
ATTTACATACCACTTAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_004454500.1\|2224554_2225106_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380339
NZ_CP019870.1\|WP_078051031.1\|2233240_2234698_-\|aminomethyl-transferring-glycine-dehydrogenase-subunit-GcvPB	unknown	unknown	gnl\|CDD\|235292
NZ_CP019870.1\|WP_004454493.1\|2216580_2217468_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213231
NZ_CP019870.1\|WP_004454498.1\|2221263_2223108_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176521
NZ_CP019870.1\|WP_004454504.1\|2230057_2230375_+\|pyrimidine/purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|377724
NZ_CP019870.1\|WP_004454501.1\|2225644_2225932_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454491.1\|2214964_2215690_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP019870.1\|WP_004454510.1\|2241231_2242218_+\|lipoate--protein-ligase	unknown	unknown	gnl\|CDD\|161920
NZ_CP019870.1\|WP_004454503.1\|2228202_2229474_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238628
NZ_CP019870.1\|WP_004454508.1\|2237977_2238493_-\|HXXEE-domain-containing-protein	unknown	unknown	gnl\|CDD\|379370
NZ_CP019870.1\|WP_004454497.1\|2220357_2220942_-\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP019870.1\|WP_004454507.1\|2234697_2237172_-\|aminomethyl-transferring-glycine-dehydrogenase-subunit-GcvPA	unknown	unknown	gnl\|CDD\|234769
NZ_CP019870.1\|WP_009889562.1\|2219078_2219255_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454505.1\|2230460_2232818_-\|HAD-IC-family-P-type-ATPase	unknown	unknown	gnl\|CDD\|319795
NZ_CP019870.1\|WP_004454512.1\|2243428_2244028_+\|TerD-family-protein	unknown	unknown	gnl\|CDD\|226595
NZ_CP019870.1\|WP_009889552.1\|2239017_2240748_-\|Na+/H+-antiporter-NhaC-family-protein	unknown	unknown	gnl\|CDD\|224671
NZ_CP019870.1\|WP_004454499.1\|2223401_2224364_-\|cysteine-synthase-family-protein	unknown	unknown	gnl\|CDD\|107204
NZ_CP019870.1\|WP_004454494.1\|2217481_2218504_-\|membrane-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004454492.1\|2215801_2216575_-\|ABC-transporter-permease	unknown	unknown	unknown
NZ_CP019870.1\|WP_003420312.1\|2242528_2243326_+\|lipoprotein	unknown	unknown	gnl\|CDD\|224381

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_004454500.1\|2224554_2225106_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.10679e-17
NZ_CP019870.1\|WP_078051031.1\|2233240_2234698_-\|aminomethyl-transferring-glycine-dehydrogenase-subunit-GcvPB	gnl\|CDD\|235292	PRK04366, PRK04366, aminomethyl-transferring glycine dehydrogenase subunit GcvPB.	0
NZ_CP019870.1\|WP_004454493.1\|2216580_2217468_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	6.10963e-106
NZ_CP019870.1\|WP_004454498.1\|2221263_2223108_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176521	cd08579, GDPD_memb_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.	6.97958e-93
NZ_CP019870.1\|WP_009889552.1\|2239017_2240748_-\|Na+/H+-antiporter-NhaC-family-protein	gnl\|CDD\|224671	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion].	2.00354e-58
NZ_CP019870.1\|WP_004454491.1\|2214964_2215690_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	9.00382e-81
NZ_CP019870.1\|WP_004454510.1\|2241231_2242218_+\|lipoate--protein-ligase	gnl\|CDD\|161920	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus. [Protein fate, Protein modification and repair].	4.63204e-94
NZ_CP019870.1\|WP_004454503.1\|2228202_2229474_+\|amidohydrolase-family-protein	gnl\|CDD\|238628	cd01303, GDEase, Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.	5.19017e-168
NZ_CP019870.1\|WP_004454508.1\|2237977_2238493_-\|HXXEE-domain-containing-protein	gnl\|CDD\|379370	pfam13787, HXXEE, Protein of unknown function with HXXEE motif. This domain contains an HXXEE motif, another conserved histidine and a YXPG motif. Its function is unknown.	1.24055e-21
NZ_CP019870.1\|WP_004454497.1\|2220357_2220942_-\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	6.50127e-94
NZ_CP019870.1\|WP_004454507.1\|2234697_2237172_-\|aminomethyl-transferring-glycine-dehydrogenase-subunit-GcvPA	gnl\|CDD\|234769	PRK00451, PRK00451, aminomethyl-transferring glycine dehydrogenase subunit GcvPA.	0
NZ_CP019870.1\|WP_004454505.1\|2230460_2232818_-\|HAD-IC-family-P-type-ATPase	gnl\|CDD\|319795	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7. This subfamily contains P-type ATPase transporters of unknown function, similar to Streptococcus pneumoniae Exp7. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids. They are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle. A general characteristic of P-type ATPases is a bundle of transmembrane helices which make up the transport path, and three domains on the cytoplasmic side of the membrane. Members include pumps that transport various light metal ions, such as H(+), Na(+), K(+), Ca(2+), and Mg(2+), pumps that transport indispensable trace elements, such as Zn(2+) and Cu(2+), pumps that remove toxic heavy metal ions, such as Cd(2+), and pumps such as aminophospholipid translocases which transport phosphatidylserine and phosphatidylethanolamine.	0
NZ_CP019870.1\|WP_004454512.1\|2243428_2244028_+\|TerD-family-protein	gnl\|CDD\|226595	COG4110, COG4110, Uncharacterized protein involved in stress response [General function prediction only].	2.42153e-79
NZ_CP019870.1\|WP_004454499.1\|2223401_2224364_-\|cysteine-synthase-family-protein	gnl\|CDD\|107204	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.	3.00924e-108
NZ_CP019870.1\|WP_004454504.1\|2230057_2230375_+\|pyrimidine/purine-nucleoside-phosphorylase	gnl\|CDD\|377724	pfam06865, DUF1255, Protein of unknown function (DUF1255). This family consists of several conserved hypothetical bacterial proteins of around 95 residues in length. The function of this family is unknown.	2.92347e-53
NZ_CP019870.1\|WP_003420312.1\|2242528_2243326_+\|lipoprotein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	3.07907e-94

>NZ_CP019870.1|WP_004454501.1|2225644_2225932_-|hypothetical-protein
MKKFLYALYSFIVIIANFRLKEKNYNFILLAIFFILLLIQNGVLKTGYQNRATFYQDNYFNGEDKNDKIKFMTIKIFIFLSLPLCFNILFNYLTS
>NZ_CP019870.1|WP_004454500.1|2224554_2225106_+|helix-turn-helix-transcriptional-regulator
MSINTVIAKNLNRLRNERNLSLGQLAELSGVSKVMLSQIEKGDSNPTVNTIWKIASGLNVPYTAILEQPQNETFIVSKTDIDVQVSENKDYRLYCYYPNTPTRNFELFQMELEEGHSYTSVGHSEKSQEYIMIIEGQLKLEVNDSIYQLRENDSICFSAESIHTYHNQGEKTLKAVIINYYPV
>NZ_CP019870.1|WP_004454499.1|2223401_2224364_-|cysteine-synthase-family-protein
MRVLNNVTEAIGNTHMLHLSKIADEFGVQGNIYAKMEYLNPGFSKKDRVALQMITEAENAGLLVPGQAVVELTSGNTGTGLAIACACKGYKFIACMSKGNSMERARMMKALGAEVVLVDQMPNSVHGQVSGEDLALVEIEAQKIAKERNAFRADQFNLEACNHAHEKYTAEEMWEQLDGNIDVFVDFLGSGSTFAGCSKTLKKHNSSIKCYVVEPETAAIYSGKEITDQGHKIQGGGYSMDLPLVDKKLIDGYIQVTDEEATDVARKLAKLEGVFAGFSSGANVCAAIKLLKSSEKGKNIVLTLNDSGLKYLSTDLYEEL
>NZ_CP019870.1|WP_004454498.1|2221263_2223108_-|glycerophosphodiester-phosphodiesterase
MQKRILRNFIFTGKNILSKLVFIIKYNFSTLILFELFHKGLALFFIWPSIRYIFDILIKSLHIVYLNMDNFIKVLTNPMSIVLIILSVIILAFYAFFEFTSVIICFNKSIKYEKIGLFELFKISFENSIKLLYPKNILLFIFVILIIPLVNTVLISGFIGKIQIPEYILDYIKSDIILNIIYMIFLLIIYISVIRWIFSIHEITLNTENFKRARKESVNLIKGKIIRTIIYSLILSLVVAIIGYAIYHSGIIFIGIWTKYCTDMEFLKNVFINRCIAFEEYFRLILSIFIFILDIGFISATYYQYKGVSISKNNIKKEKKSISKIVFNLVLILLISYIESVAFSSHINGMFNTSFSFYTTAIAHRAGAEMAPENTLAAIEEASHAKADYAEIDVQETKDGELIVLHDSNFKRTTGVDKNVWDVNYNEVKTYDAGSFYYYGKGYYDEKFVGEKIPTLKEKIKYSKGKVKLLIEIKLNGHEKGDVVKKVVQLIKENNFENQCIVASMDKTILQKVKKLDENLLTCYFMAIAYGDFSKLNYVDIYGIESTFVNKTVVEKIHKMNKKIFVWTVNSDSLIEKMLDLNVDSIITDNPYLIESAIYWKKNGFISQVSDYLF
>NZ_CP019870.1|WP_004454497.1|2220357_2220942_-|sugar-O-acetyltransferase
MTEREKMLAGELYDCGDIELLTQWHKAKDLVRDYNQTDSSDLEKKEKILNELLGGKGKNLWITAPYYVDYGNNIYFGNNCEVNMNCTFLDDNKIIIGDNALIAPNVQIYTAFHPTNAGDRFGNAKEDGSFEFCKTQTAPVTIGDNVWIGGGAIIMPGVTIGDNVVIGAGSIVTKDIPSNMIAYGNPCRIIRENK
>NZ_CP019870.1|WP_009889562.1|2219078_2219255_+|hypothetical-protein
MFIGEIDKCTHILTAYISSSYDYCNFLDTQLDDFISEYGETVVETCLHQVLLLVSRYN
>NZ_CP019870.1|WP_004454494.1|2217481_2218504_-|membrane-protein
MVNWEIKKLAKSKSMFISLGILVLILMISIFIAPVLETESYYIDKEKGRIEDTRSGIDVGNEKFQNKINVLKQFSNQTDTGEFSKKIELMSKKKLDNLSVNEYKDISFWKVFNYRVTNSLINVGMLIIISIIISNIYVDEVVTSVKDIILSSKEKKKALKSKIFVALLVPLVIYSVYLMGIFIITCMQQGVPVNGDLESFRIVDNVVALKTNLSITKYVILNIGIELLMFEGWAMIAIFGSFISKSSISSISFFIFIISITKIMSVIHILPKKLLSVVSNVNYYDLIFGFNKIIGNYLGDIMIFKVNIDIVNIAIGLLMAILIGAMSLCFLVIKSDYISR
>NZ_CP019870.1|WP_004454493.1|2216580_2217468_-|ABC-transporter-ATP-binding-protein
MNKLEIENLSKIYGKKVANDKITVTLENGVYGLLGPNGAGKSTLMKQITTLIKPDEGQILYNGEDIFKMDADYRNILGYLPQEFGVYKNFTAKEFLQYIGALKGLRGKYLNSKIGELLDLVGLYDVRNKSIGKFSGGMKRRVGIAQVLLNDPKIIVLDEPTAGLDPQERARFRNLIAKMSRDKIIILSTHIISDIESVAKETIMIKDGKLLMKGTHKDILSHMENKVYNVQVKNECEVDDIQSKYKVVSIQSDIDSIVLRIVSEDIPSEDNIQPVQAKFEDVYMFYFDLEDAREV
>NZ_CP019870.1|WP_004454492.1|2215801_2216575_-|ABC-transporter-permease
MMYLVKAEMIKILKSKSVWIIWLFLIVFGFFLIRKFDVLDTYADIFYKIEGSIPLIGLIMFIITSGNYIKEYDSNMTGLINTTKKGKKSVVLSKLVANGLILSIINISFILLVGIRGFSFFDFKNLNESIHNLWYFGNSNLNLTVIQMYIIVILTTIFASFIFAQIGLTLSSIFKSAVIPFILGGLIMAIPYFSVGFIPDKAIKFMSVTPNWIMMSQQMVKYNVPSILIVFSIVISIILMIVLTKITYENFTSSKRF
>NZ_CP019870.1|WP_004454491.1|2214964_2215690_-|response-regulator-transcription-factor
MENRVLIIDDEVEILKLLETVLKKEGLNNIYTAKTKKEGLELFKSINPDLIVLDIMLPDGEGYDICKEIRKTSNSPIIFLSAKTEELDKLLGLAIGGDDYVTKPFSPKEVAFRVKAHLRRLSYFSDAQNESKNLNNNEEKIISFGPYILNESRAELIKDGKSIGLSAKELKILSLFAHNQNQIISKEKLWDKVWGEDYVGFDNTIMVHIRKIREKLEDNPSKPEYILTIKGLGYKLAVKED
>NZ_CP019870.1|WP_004454503.1|2228202_2229474_+|amidohydrolase-family-protein
MLKVLKGNIIFTKTSETFTVFENSYIILEKGKVKGIFKEIPKEYKNLKVVDYTDKLIIPGMNDLHAHASQFKNLGMAMDKELLPWLETYTFPEESNYKDIEYATKMYKKFVKELWKSGTTRIAVFATVHKEASMKLMDIFKEVGLGAYVGKVNMNMNCPDTLLENTQDSITDTEEIINKYSDTDSIVKPIITPRFIPSCTSELLKGLGDLCLKYNIPIQSHLSENYDEIEWVRSLEPESKFYGDAYNRYNLFGQTPTLMAHCVHCSQDEIDLMRENNVMAVHCPASNFNVGSGAMPIRKLIDNNIRLALGSDISGGHTLSIFKAMVSAIQLSKLYWVNSGKKYNFLSLSETFYIATKSGGSFFGKVGSFEEGYDFDALIIDDSNLNHDNYSILERLERFIYVGDDRNIIHRYVCGKLIEEPNI
>NZ_CP019870.1|WP_004454504.1|2230057_2230375_+|pyrimidine/purine-nucleoside-phosphorylase
MSEFKNVTAVKKANVYFDGKVSSRVIILPNGERKTLGLMLPGEYTFSTREEEIMEMLAGSMDVKLPGSNEFVTYKEGQKFNVPSDSSFDLKVNEVVDYCCSYIAD
>NZ_CP019870.1|WP_004454505.1|2230460_2232818_-|HAD-IC-family-P-type-ATPase
MDKVNLERYSCDINVGLNKNQLQSRIDDNLINAFDNGKTKTYKQIFKDNIFTLFNLINIVLVCLLVSVGSFKNTLFIFIAVINTIIGVIQEIRAKRLLDNLSVIVSNKVSVIREKEKKEIDVQELVLDDIMILKTGNQICADSKVLNGKLEVNESLVTGESDIIIKNKGDFLYSGSFVVSGEAFVRVENIGKDNYANKIANDAKISKKHNSQLRNSLNAILKIVGIIIIPLGIILFAKQHFGNGDSIATSVVGTVAAVNGMIPEGLTLLTSIALAVGTIKLASHKTLVQELYCVETLARVDTLCLDKTGTITEGKMQVDDIVMLEEVDINEIMGNICNSLKDDNATLNAIRDKYNVLDTYKAKNLIPFSSERKYSGVTFENKGTYLLGAFEFIFKEKNKKLRIEVERYSKKGNRVIVLAHSDSYMEDDNIPEDIKPLAFILILDKIRDEAKETLEFFYNEGVDIKIISGDNPITVSEVARKAGLKTASNFIDATTLKNDSDIYKAVDKYSVFGRVSPQQKKQMILALKKQNHTVAMTGDGVNDVLALKEADCSIAMASGSDVTKNVSNLVLLDSNFASMPKVVMEGRKVINNIQRASSLFLVKTIFSFFLSLLTLFFFSRQYPFVPIQLSLIGAVTVGIPSFFLALEANKSRISGNFLLNILKNALPGALCVTVNVIIVYNIVEYLGYSSSVFSTMCAILTGVCGLLILRQQCLPFNKERLFLIVSMTIAFVIGILFLGGLFSFVALSRELILITMALAILMPIMIKVMLFVLDEILETIVPDLN
>NZ_CP019870.1|WP_078051031.1|2233240_2234698_-|aminomethyl-transferring-glycine-dehydrogenase-subunit-GcvPB
MKEYNSLLIDISKKGRKAYSLPKLDIDDIKIEDMIDPDMVRQSELNLPEVGELELVRHYTLLSNKNFGVDTGFYPLGSCTMKYNPKINEDMAALPNFTGMHPYQSSDTAQGSLSLMYDLSRRLAEITGMDEVTLQPSAGSHGEFTGLMIIKAYHENRGDHKRTKVIIPDSAHGTNPASAAMANFDVIQIASDKNGAVDINVLKEVLNDEVAALMLTNPSTLGLFEKNIKEIATLVHEAGGLLYYDGANMNAIMGITRPGDMGFDVVHLNLHKTFSTPHGGGGPGAGPVGVKKELVPFLPIPVIERKEDKYVLNYDREKSIGKIKNFYGNFGVLVRAYTYILTMGRDGLKEASEMAVLNANYIKESIKDDYILPIDTLCKHEFVLGGLPRGEANIKTIDIAKRLLDYGYHPPTMYFPLIINEALMIEPTESESIETLDSFIEAMKSVAKEAKEEPELLKTAPHNTLVKRVDDARAVKKPILTWSQR
>NZ_CP019870.1|WP_004454507.1|2234697_2237172_-|aminomethyl-transferring-glycine-dehydrogenase-subunit-GcvPA
MNELKRVSLYNIHKELGAKLVEFAGWEMPLEYEGINKEHEKVRKSAGIFDVSHMGEVQIKGAESEKFIQNLVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYLLVINAGNIDKDVAWIIKQSEGYNVDIKNISSEVSQLAIQGPKAEEILQKITDIDLNSIKFYKSIPSTKVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCRDTLRFEAALPLYGHEINEHISPIEGGLSIFVKTNKESFIGKSILSKEKESGAKRKLVGFEMQGKGMPRNGYDIRIGDKTVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIRKKVVPAVIVKKPFYKKQYKKDNIILNKENKFSYIPATSEDKSKMLKVVGLNSVDELFSDIPEEVKLKRDLNLEIGKSELEVSKIVKRLSEENLSLEDLTCFLGAGAYDHYIPSIIKHITSRSEFYTAYTPYQAEISQGTLQVVFEFQSMIAEITGMEIANASMYDGATAAIEACIMAMNQTRKSKIVVSKTIHPETLSVLRTYLQYKDCEIVEIDFCNEYGTTDIEKLKASVDKDTACVLIQTPNFFGIIEEMEEIEKITHENKAMLIMSVDPISLGVLKTPGEIGADIVVGEAQSLGNPLNFGGPYVGFLASKSKYTRKMPGRIVGQSLDVEGKIAYVLTLQTREQHVRREKATSNICSNQALNALVASIYMATMGKEGFKEVGMQSMKKAHYTYNKLVQTGKYKPIFKGKFFKEFAVQGNLNIETINDKLLEENILGGYNLEYNYPELKNSTLLCVTEKRSKEEIDKLVGIMEGL
>NZ_CP019870.1|WP_004454508.1|2237977_2238493_-|HXXEE-domain-containing-protein
MEKYIWLFPLLFIFHDMEEIIGFGIWLKKNKSMLDKKYPFISKVYENYSTEGMAFAVFEEFILCIIFCILTVITENQYVYLLWLGSFIAYTLHLVIHIGQSIIIRKYIPSLITSIICLPISIWCISKSIYIVDCEMSTTILYSIIGIIIVALNLKFAQSLIGKFTKWMSNI
>NZ_CP019870.1|WP_009889552.1|2239017_2240748_-|Na+/H+-antiporter-NhaC-family-protein
MRNKKINIIFLTTIMFIMSTVMVFAEEDIDTIALANAEKFGILTLIPPLVAIILAFITKNVIISLLIGILSGSFIIKASGINVFATFIQAFLDLVDRALVSLADPWNAGIILQVLAIGGVINLVAKMGGAKAIAEALAKRAKSAKGTQLITWFLGLLVFFDDYANSLIVGPMMRPVADKMKISREKLAFIIDATAAPVAGLAIISTWIGLEVGLIHDAFESISIDVDAFGIFLNTIPFRFYNILILAFIVISALLLKEFGPMRKAEIKSRSRKISIDLDEGVEELDDLAPKNGVKLSVWNAIIPIGTLIIVALASFYYSGYTSIMGGDDKALIQLFTNSPYSFEAIKEAFSASDASRALFQSALVASLVAIIMAVVKKIFTISEAIDVWIDGMKSLVITGVILILAWSLSSVIKELGTAKFLIHLLSGSLPPFLLPSLIFGLGAIISFATGTAYGTMGILMPLAIPLAYSLNPDMSYVIVSTSAVLTGAIFGDHCSPISDTTILSSMGAGCNHIDHVNTQMPYAIFTAVITIVFGYIPAGLGLPIYIVLPVAIAAIFVGIQIIGKKVDEAEIELVE
>NZ_CP019870.1|WP_004454510.1|2241231_2242218_+|lipoate--protein-ligase
MLLIYNEKTNPYFNLAMEEYLLKNFDEDLFILWRNEPSIIVGKNQNTLSEINLEYIKEYSIPVVRRQSGGGAVFHDLGNINFTFIACNNNNFSDFRRFTQPIIDLLKTLDVNAEFSGRNDLLIDGKKFSGNAQYNYKNKVMHHGTLLFSSEINDLSKALKVKPIKFEGKGIKSVKSRVTNISEHLHSKMDILEFKDAIMDYLSKTNTDNTNYCLSEHDIKQIEKLTKSKYETWDWNFGNSPKYTLSNELKYSGGNVEFNLNVDKGIITSIKFFGDFFGKCDVAFVENKLIGIRHEENALRNTLDSIEINDYFLGADTDILVSGILGVK
>NZ_CP019870.1|WP_003420312.1|2242528_2243326_+|lipoprotein
MKFKKLLCLLLCLVLTLAVVGCSKAKDDKKIVVGATLVPGGELLEELKPLIKEKGYTLEVKNFDDYILPNEALNNGEIDANLFQHEPYLKEAVKAKGYKIMAGKKLYVCPAILYSYKIKSVDEFKKGDTIAISNNPSSCSKNLRYLESIGLLTLPKGDGLVSPKDIIENPKGIQFKELDIAQIPSSLPDVTAAFIDTTYAVPAGLDAKKNGIYTAPINDEYANLLAFRTEDKDSEKIKVLQDVLTSDKARSLIEEKYKGIVIPTF
>NZ_CP019870.1|WP_004454512.1|2243428_2244028_+|TerD-family-protein
MAIELKKGQKINLTKKENSDLGEILVNLNWNQKVQKKGFFGSLRSSNIDLDLGCLFEMKNGVKGAVQALGNAFGSLDNPPFAQLDGDDRTGSNTQGENLRINGNKIKDIKRILIYAFIYEGVANWSEADGIVTIKQKQDSDLVVKLDEHKNGYNMCSIALIENVNDETFSVEKVVKYFKGHREMDTEFHWGLKWVAGRK

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Crispr_ID: NZ_CP019870_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_13

2402892-2404049

TypeV

I-A

Consensus_repeat	Method
ATTTACATTCCATATAGTTAATATAAAAC	CRT
ATTTACATTCCATATAGTTAATATAAAAC	CRISPRCasFinder
GTTTTATATTAACTATATGGAATGTAAAT	PILER-CR

17 spacers

The CRISPR arrays of NZ_CP019870_13

>merge|NZ_CP019870|13|2402892-2404049|CRT,CRISPRCasFinder,PILER-CR
TATTATATTTTTGTATGCTAATATAACTAGATAATCATAAGATAACACATTAAAAGAAAATTATAAAAACTTACATTCTGTATAGTTAATATAAAACATAAGTAATATAAATTTATGTAAAGCAACAAAAGATGGATTTACATTCCATATAGTTAATATAAAACGATTTCAAATGATTAGAATAAAAATATCAGAATTGCTATTTATATTCCATATAGTTAATATAAAACTAAGAATGGAAAAGGAAATAGGAGTTCATATTCCAACATTTACATTCCATATAGTTAATATAAAACTATGTATCCCCCATTAAAAAGGCTTAGATTAATTTCTATTTACATTCCATATAGTTAATATAAAACTCAAACATATCTAAGTTGTATTTCTCACCTTGTAGGTCATTTACATTCCATATAGTTAATATAAAACAAGGATTTTGAATGTAATTTATCATAAGGGTGGCAGATTTACATTCCATATAGTTAATATAAAACATGAAAGATAATTGGAAAACTAAAGTGCAATCTAAAAAATTTACATTCCATATAGTTAATATAAAACGGAGAATTATTAAAAGGAGTTCCCGAAGCAGATAGAATAATTTACATTCCATATAGTTAATATAAAACCATTGTTATTATTGTGGTTCTCCCTTAGCTCATAATTTATTTACATTCCATATAGTTAATATAAAACATGATATTATTATAATATTATAAATATAATAATGAGGATTTACATTCCATATAGTTAATATAAAACTAGATATTTAAAATAAGCGAAAGGGGGTCATAAAAATATTTACATTCCATATAGTTAATATAAAACATTCTAAAGATATTTTGCCTTGCAGTTGGGATTTCGAATTTACATTCCATATAGTTAATATAAAACCATCATAGGGGCTAATATAGTTAAAGGTGTTGGCGTATTTACATTCCATATAGTTAATATAAAACGGTTTGGTTACAAGGTATAGTAGAAGGATATAGTGGAATTTACATTCCATATAGTTAATATAAAACATGGAACTAAGAGAGTACACCATCACATGATACTCAAATTTACATTCCATATAGTTAATATAAAACTAAAGCTGGAAAAGAAACAGCTATAATGAGTAATAATAATTTACATTCCATATAGTTAATATAAAAC

>NZ_CP019870|13|7|2402892-2404049|CRT
TATTATATTTTTGTATGCTAATATAACTA	GATAATCATAAGATAACACATTAAAAGAAAATTATAAAA
ACTTACATTCTGTATAGTTAATATAAAAC	ATAAGTAATATAAATTTATGTAAAGCAACAAAAGATGG
ATTTACATTCCATATAGTTAATATAAAAC	GATTTCAAATGATTAGAATAAAAATATCAGAATTGCT
ATTTATATTCCATATAGTTAATATAAAAC	TAAGAATGGAAAAGGAAATAGGAGTTCATATTCCAAC
ATTTACATTCCATATAGTTAATATAAAAC	TATGTATCCCCCATTAAAAAGGCTTAGATTAATTTCT
ATTTACATTCCATATAGTTAATATAAAAC	TCAAACATATCTAAGTTGTATTTCTCACCTTGTAGGTC
ATTTACATTCCATATAGTTAATATAAAAC	AAGGATTTTGAATGTAATTTATCATAAGGGTGGCAG
ATTTACATTCCATATAGTTAATATAAAAC	ATGAAAGATAATTGGAAAACTAAAGTGCAATCTAAAAA
ATTTACATTCCATATAGTTAATATAAAAC	GGAGAATTATTAAAAGGAGTTCCCGAAGCAGATAGAATA
ATTTACATTCCATATAGTTAATATAAAAC	CATTGTTATTATTGTGGTTCTCCCTTAGCTCATAATTT
ATTTACATTCCATATAGTTAATATAAAAC	ATGATATTATTATAATATTATAAATATAATAATGAGG
ATTTACATTCCATATAGTTAATATAAAAC	TAGATATTTAAAATAAGCGAAAGGGGGTCATAAAAAT
ATTTACATTCCATATAGTTAATATAAAAC	ATTCTAAAGATATTTTGCCTTGCAGTTGGGATTTCGA
ATTTACATTCCATATAGTTAATATAAAAC	CATCATAGGGGCTAATATAGTTAAAGGTGTTGGCGT
ATTTACATTCCATATAGTTAATATAAAAC	GGTTTGGTTACAAGGTATAGTAGAAGGATATAGTGGA
ATTTACATTCCATATAGTTAATATAAAAC	ATGGAACTAAGAGAGTACACCATCACATGATACTCAA
ATTTACATTCCATATAGTTAATATAAAAC	TAAAGCTGGAAAAGAAACAGCTATAATGAGTAATAATA
ATTTACATTCCATATAGTTAATATAAAAC

>NZ_CP019870|13|12|2402960-2404049|CRISPRCasFinder
ACTTACATTCTGTATAGTTAATATAAAAC	ATAAGTAATATAAATTTATGTAAAGCAACAAAAGATGG
ATTTACATTCCATATAGTTAATATAAAAC	GATTTCAAATGATTAGAATAAAAATATCAGAATTGCT
ATTTATATTCCATATAGTTAATATAAAAC	TAAGAATGGAAAAGGAAATAGGAGTTCATATTCCAAC
ATTTACATTCCATATAGTTAATATAAAAC	TATGTATCCCCCATTAAAAAGGCTTAGATTAATTTCT
ATTTACATTCCATATAGTTAATATAAAAC	TCAAACATATCTAAGTTGTATTTCTCACCTTGTAGGTC
ATTTACATTCCATATAGTTAATATAAAAC	AAGGATTTTGAATGTAATTTATCATAAGGGTGGCAG
ATTTACATTCCATATAGTTAATATAAAAC	ATGAAAGATAATTGGAAAACTAAAGTGCAATCTAAAAA
ATTTACATTCCATATAGTTAATATAAAAC	GGAGAATTATTAAAAGGAGTTCCCGAAGCAGATAGAATA
ATTTACATTCCATATAGTTAATATAAAAC	CATTGTTATTATTGTGGTTCTCCCTTAGCTCATAATTT
ATTTACATTCCATATAGTTAATATAAAAC	ATGATATTATTATAATATTATAAATATAATAATGAGG
ATTTACATTCCATATAGTTAATATAAAAC	TAGATATTTAAAATAAGCGAAAGGGGGTCATAAAAAT
ATTTACATTCCATATAGTTAATATAAAAC	ATTCTAAAGATATTTTGCCTTGCAGTTGGGATTTCGA
ATTTACATTCCATATAGTTAATATAAAAC	CATCATAGGGGCTAATATAGTTAAAGGTGTTGGCGT
ATTTACATTCCATATAGTTAATATAAAAC	GGTTTGGTTACAAGGTATAGTAGAAGGATATAGTGGA
ATTTACATTCCATATAGTTAATATAAAAC	ATGGAACTAAGAGAGTACACCATCACATGATACTCAA
ATTTACATTCCATATAGTTAATATAAAAC	TAAAGCTGGAAAAGAAACAGCTATAATGAGTAATAATA
ATTTACATTCCATATAGTTAATATAAAAC

>NZ_CP019870|13|6|2403027-2404049|PILER-CR
ATTTACATTCCATATAGTTAATATAAAAC	GATTTCAAATGATTAGAATAAAAATATCAGAATTGCT
ATTTATATTCCATATAGTTAATATAAAAC	TAAGAATGGAAAAGGAAATAGGAGTTCATATTCCAAC
ATTTACATTCCATATAGTTAATATAAAAC	TATGTATCCCCCATTAAAAAGGCTTAGATTAATTTCT
ATTTACATTCCATATAGTTAATATAAAAC	TCAAACATATCTAAGTTGTATTTCTCACCTTGTAGGTC
ATTTACATTCCATATAGTTAATATAAAAC	AAGGATTTTGAATGTAATTTATCATAAGGGTGGCAG
ATTTACATTCCATATAGTTAATATAAAAC	ATGAAAGATAATTGGAAAACTAAAGTGCAATCTAAAAA
ATTTACATTCCATATAGTTAATATAAAAC	GGAGAATTATTAAAAGGAGTTCCCGAAGCAGATAGAATA
ATTTACATTCCATATAGTTAATATAAAAC	CATTGTTATTATTGTGGTTCTCCCTTAGCTCATAATTT
ATTTACATTCCATATAGTTAATATAAAAC	ATGATATTATTATAATATTATAAATATAATAATGAGG
ATTTACATTCCATATAGTTAATATAAAAC	TAGATATTTAAAATAAGCGAAAGGGGGTCATAAAAAT
ATTTACATTCCATATAGTTAATATAAAAC	ATTCTAAAGATATTTTGCCTTGCAGTTGGGATTTCGA
ATTTACATTCCATATAGTTAATATAAAAC	CATCATAGGGGCTAATATAGTTAAAGGTGTTGGCGT
ATTTACATTCCATATAGTTAATATAAAAC	GGTTTGGTTACAAGGTATAGTAGAAGGATATAGTGGA
ATTTACATTCCATATAGTTAATATAAAAC	ATGGAACTAAGAGAGTACACCATCACATGATACTCAA
ATTTACATTCCATATAGTTAATATAAAAC	TAAAGCTGGAAAAGAAACAGCTATAATGAGTAATAATA
ATTTACATTCCATATAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_003427501.1\|2398209_2398650_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225064
NZ_CP019870.1\|WP_003439371.1\|2404707_2406801_-\|GGDEF-and-EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP019870.1\|WP_003439357.1\|2415073_2415223_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003439379.1\|2399229_2401350_+\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NZ_CP019870.1\|WP_003436749.1\|2391095_2392244_-\|DUF362-domain-containing-protein	unknown	unknown	gnl\|CDD\|224917
NZ_CP019870.1\|WP_003439388.1\|2393111_2394056_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP019870.1\|WP_003427410.1\|2412775_2413423_+\|lactate-utilization-protein	unknown	unknown	gnl\|CDD\|376839
NZ_CP019870.1\|WP_003439377.1\|2401482_2402301_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133409
NZ_CP019870.1\|WP_003439382.1\|2397068_2398058_-\|DUF2232-domain-containing-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003439385.1\|2394441_2395323_+\|polysaccharide-deacetylase	unknown	unknown	gnl\|CDD\|200569
NZ_CP019870.1\|WP_009889371.1\|2392343_2392889_-\|NADH-peroxidase	unknown	unknown	gnl\|CDD\|153105
NZ_CP019870.1\|WP_003439363.1\|2411471_2412386_+\|DUF2935-domain-containing-protein	unknown	unknown	gnl\|CDD\|378573
NZ_CP019870.1\|WP_003420037.1\|2398976_2399204_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NZ_CP019870.1\|WP_003439365.1\|2410457_2410640_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003439367.1\|2408352_2409180_+\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
NZ_CP019870.1\|WP_003439366.1\|2409198_2410047_+\|pantoate--beta-alanine-ligase	unknown	unknown	gnl\|CDD\|234741
NZ_CP019870.1\|WP_009896453.1\|2413589_2414159_-\|lipoprotein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003439360.1\|2414163_2415063_-\|4Fe-4S-binding-protein	unknown	unknown	gnl\|CDD\|274004
NZ_CP019870.1\|WP_003439383.1\|2395383_2396592_-\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237360
NZ_CP019870.1\|WP_071605615.1\|2407454_2408378_+\|DUF2520-domain-containing-protein	unknown	unknown	gnl\|CDD\|378484

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_003427501.1\|2398209_2398650_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	2.14803e-35
NZ_CP019870.1\|WP_003439371.1\|2404707_2406801_-\|GGDEF-and-EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	5.46605e-88
NZ_CP019870.1\|WP_003439379.1\|2399229_2401350_+\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	4.06427e-151
NZ_CP019870.1\|WP_003436749.1\|2391095_2392244_-\|DUF362-domain-containing-protein	gnl\|CDD\|224917	COG2006, COG2006, Uncharacterized conserved protein [Function unknown].	2.47411e-76
NZ_CP019870.1\|WP_003439388.1\|2393111_2394056_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.30316e-12
NZ_CP019870.1\|WP_003427410.1\|2412775_2413423_+\|lactate-utilization-protein	gnl\|CDD\|376839	pfam02589, LUD_dom, LUD domain. This entry represents a domain found in lactate utilization proteins B (LutB) and C (LutC), as well as several uncharacterized proteins. LutB and LutC are encoded by th conserved LutABC operon in bacteria. They are involved in lactate utilization and is implicated in the oxidative conversion of L-lactate into pyruvate.	3.25008e-55
NZ_CP019870.1\|WP_003439377.1\|2401482_2402301_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133409	cd04782, HTH_BltR, Helix-Turn-Helix DNA binding domain of the BltR transcription regulator. Helix-turn-helix (HTH) multidrug-efflux transporter transcription regulator, BltR (BmrR-like transporter) of Bacillus subtilis, and related proteins; N-terminal domain. Blt, like Bmr, is a membrane protein which causes the efflux of a variety of toxic substances and antibiotics. These regulators are comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the C-terminal domains are often unrelated and bind specific coactivator molecules. They share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	2.39187e-41
NZ_CP019870.1\|WP_003439385.1\|2394441_2395323_+\|polysaccharide-deacetylase	gnl\|CDD\|200569	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins. This family is represented by a putative polysaccharide deacetylase PgdA from the oral pathogen Streptococcus mutans (SmPgdA) and Bacillus subtilis YheN (BsYheN), which are members of the carbohydrate esterase 4 (CE4) superfamily. SmPgdA is an extracellular metal-dependent polysaccharide deacetylase with a typical CE4 fold, with metal bound to a His-His-Asp triad. It possesses de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. SmPgdA plays a role in tuning cell surface properties and in interactions with (salivary) agglutinin, an essential component of the innate immune system, most likely through deacetylation of an as-yet-unidentified polysaccharide. SmPgdA shows significant homology to the catalytic domains of peptidoglycan deacetylases from Streptococcus pneumoniae (SpPgdA) and Listeria monocytogenes (LmPgdA), both of which are involved in the bacterial defense mechanism against human mucosal lysozyme. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. The biological function of BsYheN is still unknown. This family also includes many uncharacterized polysaccharide deacetylases mainly found in bacteria.	2.4597e-75
NZ_CP019870.1\|WP_009889371.1\|2392343_2392889_-\|NADH-peroxidase	gnl\|CDD\|153105	cd01046, Rubrerythrin_like, rubrerythrin-like, diiron-binding domain. Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.	1.43332e-53
NZ_CP019870.1\|WP_003439363.1\|2411471_2412386_+\|DUF2935-domain-containing-protein	gnl\|CDD\|378573	pfam11155, DUF2935, Domain of unknown function (DUF2935). This family of proteins with unknown function appears to be restricted to Firmicutes. The structure of this protein has been solved and each domain is composed of four alpha helices. A metal cluster composed of iron and magnesium lies between the two domains.	2.79953e-33
NZ_CP019870.1\|WP_003420037.1\|2398976_2399204_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	1.57039e-13
NZ_CP019870.1\|WP_003439367.1\|2408352_2409180_+\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	5.69992e-171
NZ_CP019870.1\|WP_003439366.1\|2409198_2410047_+\|pantoate--beta-alanine-ligase	gnl\|CDD\|234741	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed.	2.73955e-163
NZ_CP019870.1\|WP_003439360.1\|2414163_2415063_-\|4Fe-4S-binding-protein	gnl\|CDD\|274004	TIGR02163, Ferredoxin-type_protein_NapH_homolog, ferredoxin-type protein, NapH/MauN family. Most members of this family are the NapH protein, found next to NapG,in operons that encode the periplasmic nitrate reductase. Some species with this reductase lack NapC but accomplish electron transfer to NapAB in some other manner, likely to involve NapH, NapG, and/or some other protein. A few members of this protein are designated MauN and are found in methylamine utilization operons in species that appear to lack a periplasmic nitrate reductase.	3.69407e-25
NZ_CP019870.1\|WP_003439383.1\|2395383_2396592_-\|tyrosine--tRNA-ligase	gnl\|CDD\|237360	PRK13354, PRK13354, tyrosyl-tRNA synthetase; Provisional.	0
NZ_CP019870.1\|WP_071605615.1\|2407454_2408378_+\|DUF2520-domain-containing-protein	gnl\|CDD\|378484	pfam10728, DUF2520, Domain of unknown function (DUF2520). This presumed domain is found C-terminal to a Rossmann-like domain suggesting that these proteins are oxidoreductases.	1.10772e-41

>NZ_CP019870.1|WP_003439377.1|2401482_2402301_-|MerR-family-transcriptional-regulator
MEKQYFTTGEFAKLCGISKQTLIFYDKIGIFSPEYKDKNNYRYYSVYQYDTLDILQSLREIGMSLEEIKEYIQNRTPQLCVKMLKEEEKKIREKIKKLRKISSKMQNRINITVEGISKMNSEEIYISKKFEEYLVLSSDLSNMSNSDFMMELIDFTNYCKSKNLYQGYELGVIVSNENIKNGDYLSISSFYLKIDKKIKDKKLYVKPEGMYACIKHIGKYEDSYKSYEKLKKYIYENEYKIVGNSYEESILDFFCESNEDNYMTEISIQVSR
>NZ_CP019870.1|WP_003439379.1|2399229_2401350_+|ferrous-iron-transport-protein-B
MGLTHNSTKMSSLKDMFDIDNKEDQFVIALAGNPNTGKSTVFNHLTGLRQHTGNWPGKTVATARGNFKYKNTEYALIDLPGTYSLFALSQEEIVARDFICFGNPDAVIVVCDATCLERNLNLVFQVMELTDKVILCINLIDEARKKGITIDKKLLEDSLGIPVILTAARNGSGMDELLDTLNDVSFDKYKLNNKPVRYNENIENVVKSIQPELDNIIPGINSRWLGLRLIDGDESIFESMSNYIDKDSIDAINEVKKKIPDNINKQKIRDEFTKINYDYAKKLSDECCSNVAKKSTDREEKVDKILTSKIFGLPIMLLLLGTILWITIEGANYPSTLLSNLLLGFEPSISGILNSINCPSWLNDMLVLGLYRTLAWVISVMLPPMAIFFPLFTLLEDFGYLPRVAFNLDHLFKKACAHGKQCLTMCMGFGCNAAGVIGCRIIDSPRERLIAILTNNFVPCNGRFPTLIAISTIFFSSVITNSFVSSVATALCITLLIILGVIITLLVSYTLSKTLLKGVPSTFTLELPPYRVPQIGRTLYTSIIDRTIFVLGRAVMVAIPAGVITWIFANIYIGDLSILSHVANFLDPLAKLIGLDGFILLAFILGFPANEIVVPILLMAYLATGSMIELDSFSALGQVLREHGWTYLTALNVMLFSLLHWPCATTLLTIKKETGSLKWTALGFLMPTILAFVVCFLTTTVYNLFI
>NZ_CP019870.1|WP_003420037.1|2398976_2399204_+|ferrous-iron-transport-protein-A
MKNLNDIQVKKTVKVEDILSSGNLRERMLALGLTRGAVIDVVRKGPKNNLTVYKIRGSKIALRQEESSLILVSDI
>NZ_CP019870.1|WP_003427501.1|2398209_2398650_+|GNAT-family-N-acetyltransferase
MFKIKHFNDLSLDEFYEIAKSRYEVFACEQKIFSLNDYDDIDKSSYHIFLKENGLICAYARIIPKEYSSYNDVSIGRVLVLSSHRRKGLAKQMMDCAIDFIKVNLHENNITLSAQTYIKNLYLSCGFKEISEVYDEAGIEHIKMRL
>NZ_CP019870.1|WP_003439382.1|2397068_2398058_-|DUF2232-domain-containing-protein
MIYGGSVLNTTKKLTEAALLSSLFIVVTIIAVSTGFGYAIYLDFIVPVFFCIICLKCDLKYTILSGITSLLIISLVLGNLGTAIWASQSVLLGIMCGYLINKPTMVMDDLVYGSVFGVIVMVFIDIYASTLIGYSFMKEFQGYSKWIYFNGYTNFIYYLMIALFPFGMVFCIYLLSLILGNKLHILDSNSLKKFLIFKNFRNLNQFLCCSKKAFYICVSYLAIFEVLKLLNVKVDSVYLKTIFISITYISVYFIIRDSCMSLQNFIIAKFRKLLYARILFLIIILLLFFIFDVTVIGLIIINAFLNKKINIRLSQSNIVNKQINLLIEK
>NZ_CP019870.1|WP_003439383.1|2395383_2396592_-|tyrosine--tRNA-ligase
MKSIDEQMRIIMKGVDDLIDEKELREKLIKSEKEGKPMIVKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHQIVIIIGDFTGKIGDPTGKSKARKALTTEQVLANAKTYEEQIFKVLDKEKTIVRFNSEWLAKLNFEDVIKLAATITVARMLEREDFKKRYEGQMPISVHEFFYPLMQAYDSIALEADIELGGTDQRFNLLMGRSLQREFGMESQIVIMMPLIEGLDGKEKMSKSLGNYIGIDEEAGIMYQKSMEIPDELIIKYYNLVTDVHPDEVNKIESQLKEGSVNPRDIKMDLAREIVTLYHGEESAKEAEERFKSVFQKGQIPEDIQTIQVKEDGFDLIEVLVSNEIVKSKSEVRRLASQGGVKVNGEKVEDLSTIVKESELVVQIGKKKFVKIELVK
>NZ_CP019870.1|WP_003439385.1|2394441_2395323_+|polysaccharide-deacetylase
MVKKRKKKTVALTILVVIVIGIFSMAWADMSRKKEMKETQERLKAERLEKERIEKEKNEPIIGAKKEAVKEYGYDAKIVWDKLNKYDYSNNGEKIVFLTFDDGPSTTNTPQVLDILKRHGVRGTFFIKGDSLERKGANEILKRTFDEGNAIAHHSYTHDYKKLYPNRSLNLDTFVNELNKTDEAMKKVLGKNFSSNVVRCPGGYMSWKNMEPLGNYLKEKNMASIDWNALNADAEGKKKNAQELFEHAKKSSEGKEMVVLLMHDTYGKQETVNALDQIITYFKDNGYQFKILI
>NZ_CP019870.1|WP_003439388.1|2393111_2394056_-|DMT-family-transporter
MQKNKKEGALLKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLLFFKQIRANMGKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVPFIGFILYRRKLDKIGIISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSEFAKDNNPMALTAIQFTVAFLMSVVVQTFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQTICQKRVDGTRTAIILSTEAVFGTIFSIIILKELITAKLVIGSILIFVAIITAETKLSFLKSKKVKLKDSEESSLESI
>NZ_CP019870.1|WP_009889371.1|2392343_2392889_-|NADH-peroxidase
MKKFVCTVCGYIHEGDAAPAQCPVCKVGADKFEEMKGEMVWADEHRIGVAQGVDAEIIEGLRANFTGECTEVGMYLAMSRQADREGYPEVAEAYKRIAFEEAEHAAKFAELLGEVVVADTKENLRVRVDAEYGATDGKLKLAKRAKELGLDAIHDTVHEMCKDEARHGKAFLGLLNRHFGK
>NZ_CP019870.1|WP_003436749.1|2391095_2392244_-|DUF362-domain-containing-protein
MKSVSVRSCKTYNYEEVKLSIEKNLEDIGGIDKFVKKGSKVLIKPNLLMKKKPEEATTTHPMVVKVVCEKLLELNCDITIADSPGGPYNQSSLKSIYKASGIEEVANELGIKLNYDVSDVKIHSEKAHVLKYMDIIKPIVDSDYIINLCKLKTHIMATFTGGTKNLYGCIAGLKKAEIHYRFPTEELFCENVLLDICDYIKPTLTIMDGIVGMEGDGPSAGTTREIGVLLASQNPYAIDVVACKIISLLPNRVATIRGAIKRGYIQEDFSDIEILGEDIKDLIIKNYKIPNVSKDLRLFSVKLPKFLNEPISKLITPKPVVRFQDCIKCGKCKEACPASTIEIGTKGAIIDLSKCIRCYCCHELCPKKAIDVKRNFVFKYVK
>NZ_CP019870.1|WP_003439371.1|2404707_2406801_-|GGDEF-and-EAL-domain-containing-protein
MNKHNFEVILNQLQINIYVTNIHTNEIIFMNKKMKEEYNILDPEGKVCWQVLYPEKNSTCSFCKVLELLKNDKKGVLIKWYEKCNKLNRVFENYDSLITWQDGTVVHMHQSIDIANSTSLNKPIKINEFHEISNNKEEKGVFNFSRDNFDYNSTLLYDALIRGTDEYIYICNMKTGVFRYSPSQVELFDLPGEIVENPLVYWKKIVHPEDWNRFYKSNTEIGKNQMDYHTVEFRAKNRSGEYIWLRCRGQLMRDEFGEPSIFAGIMTQLGKQNKIDSLTQLLNYHEFMSVFEDKISNPMIEKLCIVLLNIDDFKNVNEMYDRDFGDNIIKTLAQSIQSILPDNAELYKLDGDEMGILVDNVEENEILTLYNQIQNMIIHLQLWRKYGLNITISAGCVIYPKHGDTVKELYKCASYSLQYAKEHGKNRLVFFSQEILKNKMYSLEMMRDLKASINDDFRGFSLRFQPQVDTESHKIIGVEVLLRWTNDKCKAISPLEFIPILEENDMINIVGAWVLRMALRTFRKWIDYYPFFKVSVNVSAVQILEDTFIEDIVKIIDDENFPYQNLVLELTESHTVQNMSILQFKFKVLQDLGIYIAMDDFGTGYSSLEVLKFSPIDIVKIDRVFVKDILKSKFDATFIHFIVAICHDVGIKVCLEGVETQEEYDLVKQIKPDYIQGYLFGKPQTATEIFDLLKLDN
>NZ_CP019870.1|WP_071605615.1|2407454_2408378_+|DUF2520-domain-containing-protein
MGSGKVGTSLANYFLSKGYCVSGFYGRNQLSLLESTNLTKTKIYSNLKDIIYENDILFITTSDDSIEIIDKKLSKFNLKHKYICHTSGSLKSSILFCSKKAGALIYSIHPIFAFSNKNTNIKKMKDICFSIEGDNEQDDLVIQNFIDDLGNQFFIRDKDTSSTYHLANVLVSNLVLSLLDIGVSYFIKLGLSEEESLKAISPLVKKNIENILDNGFTKALTGPVSRGDITPIRKHLSVLDKKDEDIYKILSLNLLKIIALGNDNSLKGIKNITIENAIENLISKSEKYKEIYKLLGGKNDEKYHTDF
>NZ_CP019870.1|WP_003439367.1|2408352_2409180_+|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MKNTIQTFKNAKYEGKKLSMLTAYDYSIAKIMDECDINGILIGDSLGMVIKGEENTLSVTIDEIIYHTKAVKNGVKNALIVSDMPFLSYHVSIEDAVKNAGRLIKEGGAHAVKLEGGSNVIKQIESIVNAQIPVMGHLGLTPQSVNSFGGFKVQGNTSETARQLIEDAKLIEKAGAFSIVLEGVPTKIAEMVTNSISIPTIGIGAGINCDGQILVYQDMLGMFGDFVPKFVKQYANIGDIMKDSIKNYILEVNTGAFPQEKHSFSINESELEKLY
>NZ_CP019870.1|WP_003439366.1|2409198_2410047_+|pantoate--beta-alanine-ligase
MLVKEIKLLRNIIKDWRKHGYSIGLVTTMGFLHEGHQSLIKKAIKENDKVVVSVFVNPTQFGPNEDFNSYPRDIDKDFKYCMDSGATVVFNPSPEEMYLKGNCTTINVSGLTDFLCGAKRPVHFGGVCLVVSKFLNIVTPDKAYFGEKDAQQLAVIKRMVKDLNIDTEIIGCPIIRENDGLAKSSRNTYLSEEERKSALILNKSLSLAKEELVKGNLNPENIKELIIAKINSEHLAKIDYVEIVDSETLQPVKQIEHSILVAIAVFIGKTRLIDNFTFELNI
>NZ_CP019870.1|WP_003439365.1|2410457_2410640_+|hypothetical-protein
MFKDKIDECVHIMTAYIASLKEYYSFIETQIGDFIKKYGEDVVELCLHRVMILLCECGLA
>NZ_CP019870.1|WP_003439363.1|2411471_2412386_+|DUF2935-domain-containing-protein
MIDNQKYVILSLELHLFFSRIMKEHALFLEAGFTNKNYNLAMEADHYKKQFEDLLSYTVSASNGIIRPDILYSEELVTTLTSVAEQKTEEFTGIEINKNITTRELNLQSGVNPQVGQDLVNYVAQLNSDAIRLLDGLINFKERVLDGVLSCTIFTSNYPLLLEHIIHEANLYRSYVVDLENKIDIESKNAKEIELFWDHIMMEHALFMRGLLDPSEGELINTSNDFAIKFNELIEKTNEMTDSNIKNITEETLNETVEFKDFKEAGASGIEQCKIKSIILPLLADHVLREANHYIRILESYKNM
>NZ_CP019870.1|WP_003427410.1|2412775_2413423_+|lactate-utilization-protein
MIRQTPLEKRYDKLGPHIVTALKKRYFDAYYCKTRNEALQQILDLIPQNHVVSWGGSETLKEMGVQTAVREKGFKVIDRDLAKTPEERTEIMRQALLCDTFLMSSNAISEDGQLFNIDGNGNRVAAMIFGPKNVIVVAGMNKIVKNIDDAIQRTRTIASPAVVQRFQDVNTPCYINGSCIDCTSPESICAYMVTTRISRPAKKIKVILVGENLGL
>NZ_CP019870.1|WP_009896453.1|2413589_2414159_-|lipoprotein
MKKFIICIIMFAISVLVLAGCTNDNKIKNEVDSMFNSIKTQDADTVDKYFPKSGLGNLIYEDKEGFKMYSKNMTWEISDIKNNKDKVTVDLKINNTDMVSILKKNPPKLGEMMPNPTMKDIDSAKKKEFNITLELVKSGDNYVCKVNQESAMKLLNVITGGGIDYLADYNKDYYKQLDEEQKNYENKNS
>NZ_CP019870.1|WP_003439360.1|2414163_2415063_-|4Fe-4S-binding-protein
MKLLSKVNNNIRLITQVAFTALTNGYVNGFLEGTIYGGESKKLCVPGLNCYSCPGALGACPIGSLQAVLSSREYKFSFYVVGFLMAFGAFFGRFVCGWLCPFGLVQDLLHKVPFPVKIKKVYGDKYLKYLKYIVLIMFVIILPVAIVNVAGGGNPWFCKWICPSGTLLGGIPLILGNENLRESIGFLFSWKLSILLLILLMSIITYRPFCKYICPLGAIYGFFNPISIYRFKIDKDKCTNCTACQTKCKLDIPIYKDVNSPDCIRCGECIKVCPQNAITTTFSKDKKENNICAKKYRGI
>NZ_CP019870.1|WP_003439357.1|2415073_2415223_-|hypothetical-protein
MSNFIKDNKKSISIIAISIIFIALGTYRGETNTVLTKAIMICLECIGIG

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Crispr_ID: NZ_CP019870_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_14

2514308-2514668

Orphan

NA:I-A

Consensus_repeat	Method
ATTTACATACCACTTAGTTAATATAAAAC	CRISPRCasFinder
ATACCACTTAGTTAATATAAAAC	CRT
GTTTTATATTAACTAAGTGGTATGTAAAT	PILER-CR

5 spacers

The CRISPR arrays of NZ_CP019870_14

>merge|NZ_CP019870|14|2514308-2514668|CRISPRCasFinder,CRT,PILER-CR
TATTCTATACATTTTAGTTAATGTAAAATTTCTTGATTGTACTCTCTAACTTTTCAACATTATACTATTTATATACCACTTAGTTAATATAAACCCCTTAGCTGGTTCTAGTGCTTTTTCTATGATTTTAGTCATATTTACATACCACTTAGTTAATATAAAACCAATTTAGATGATGTATATGTGCAAAAGGAAGAAATAATTTACATACCACTTAGTTAATATAAAACGGTCACTACAACTTATACTTCCAGTCTAACGATTTGAATTTACATACCACTTAGTTAATATAAAACATATTTTGGATTTATTAATATAAACATAATTAAAAAATTTACATACCACTTAGTTAATATAAAAC

>NZ_CP019870|14|13|2514308-2514668|CRISPRCasFinder
TATTCTATACATTTTAGTTAATGTAAAAT	TTCTTGATTGTACTCTCTAACTTTTCAACATTATACT
ATTTATATACCACTTAGTTAATATAAACC	CCTTAGCTGGTTCTAGTGCTTTTTCTATGATTTTAGTCAT
ATTTACATACCACTTAGTTAATATAAAAC	CAATTTAGATGATGTATATGTGCAAAAGGAAGAAATA
ATTTACATACCACTTAGTTAATATAAAAC	GGTCACTACAACTTATACTTCCAGTCTAACGATTTGA
ATTTACATACCACTTAGTTAATATAAAAC	ATATTTTGGATTTATTAATATAAACATAATTAAAAA
ATTTACATACCACTTAGTTAATATAAAAC

>NZ_CP019870|14|8|2514314-2514668|CRT
ATACATTTTAGTTAATGTAAAAT	TTCTTGATTGTACTCTCTAACTTTTCAACATTATACTATTTAT
ATACCACTTAGTTAATATAAACC	CCTTAGCTGGTTCTAGTGCTTTTTCTATGATTTTAGTCATATTTAC
ATACCACTTAGTTAATATAAAAC	CAATTTAGATGATGTATATGTGCAAAAGGAAGAAATAATTTAC
ATACCACTTAGTTAATATAAAAC	GGTCACTACAACTTATACTTCCAGTCTAACGATTTGAATTTAC
ATACCACTTAGTTAATATAAAAC	ATATTTTGGATTTATTAATATAAACATAATTAAAAAATTTAC
ATACCACTTAGTTAATATAAAAC

>NZ_CP019870|14|7|2514374-2514668|PILER-CR
ATTTATATACCACTTAGTTAATATAAACC	CCTTAGCTGGTTCTAGTGCTTTTTCTATGATTTTAGTCAT
ATTTACATACCACTTAGTTAATATAAAAC	CAATTTAGATGATGTATATGTGCAAAAGGAAGAAATA
ATTTACATACCACTTAGTTAATATAAAAC	GGTCACTACAACTTATACTTCCAGTCTAACGATTTGA
ATTTACATACCACTTAGTTAATATAAAAC	ATATTTTGGATTTATTAATATAAACATAATTAAAAA
ATTTACATACCACTTAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_003438571.1\|2512248_2513982_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP019870.1\|WP_003438573.1\|2511175_2512009_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP019870.1\|WP_003429356.1\|2520564_2520993_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|377396
NZ_CP019870.1\|WP_003429376.1\|2505401_2506076_+\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
NZ_CP019870.1\|WP_003438588.1\|2504627_2505182_+\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238496
NZ_CP019870.1\|WP_003438580.1\|2508910_2511145_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP019870.1\|WP_003438567.1\|2515926_2516172_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003429374.1\|2506580_2506757_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003438585.1\|2506944_2507184_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_009902494.1\|2521811_2522747_+\|TIGR01212-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|224163
NZ_CP019870.1\|WP_003438582.1\|2507317_2508127_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP019870.1\|WP_003438554.1\|2516924_2517071_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003438538.1\|2524280_2525711_+\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226350
NZ_CP019870.1\|WP_077699382.1\|2515197_2515302_-\|IS3-family-transposase	unknown	unknown	unknown
NZ_CP019870.1\|WP_003429358.1\|2519829_2520498_-\|diphthine--ammonia-ligase	unknown	unknown	gnl\|CDD\|238952
NZ_CP019870.1\|WP_003438549.1\|2518356_2519712_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240548
NZ_CP019870.1\|WP_003438593.1\|2502934_2503720_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225928
NZ_CP019870.1\|WP_003438590.1\|2504184_2504550_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP019870.1\|WP_003438541.1\|2523018_2523963_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP019870.1\|WP_003438546.1\|2521099_2521693_+\|DUF308-domain-containing-protein	unknown	unknown	gnl\|CDD\|225786

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_003438571.1\|2512248_2513982_+\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.28804e-46
NZ_CP019870.1\|WP_003438573.1\|2511175_2512009_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	3.6545e-29
NZ_CP019870.1\|WP_003438593.1\|2502934_2503720_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225928	COG3393, COG3393, Predicted acetyltransferase [General function prediction only].	3.55693e-31
NZ_CP019870.1\|WP_003438588.1\|2504627_2505182_+\|cysteine-hydrolase	gnl\|CDD\|238496	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.	4.17559e-57
NZ_CP019870.1\|WP_003438580.1\|2508910_2511145_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	4.14748e-92
NZ_CP019870.1\|WP_003429358.1\|2519829_2520498_-\|diphthine--ammonia-ligase	gnl\|CDD\|238952	cd01994, Alpha_ANH_like_IV, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.	4.64591e-55
NZ_CP019870.1\|WP_009902494.1\|2521811_2522747_+\|TIGR01212-family-radical-SAM-protein	gnl\|CDD\|224163	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only].	8.9682e-180
NZ_CP019870.1\|WP_003438582.1\|2507317_2508127_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	5.47567e-25
NZ_CP019870.1\|WP_003438538.1\|2524280_2525711_+\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	8.37174e-137
NZ_CP019870.1\|WP_003438546.1\|2521099_2521693_+\|DUF308-domain-containing-protein	gnl\|CDD\|225786	COG3247, HdeD, Uncharacterized conserved protein [Function unknown].	0.00991138
NZ_CP019870.1\|WP_003438549.1\|2518356_2519712_+\|MATE-family-efflux-transporter	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	6.88958e-115
NZ_CP019870.1\|WP_003429356.1\|2520564_2520993_-\|DMT-family-transporter	gnl\|CDD\|377396	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ. DMT_YdcZ is a family of putative inner membrane exporters from both Gram-positive and Gram-negative bacteria.	2.2504e-17
NZ_CP019870.1\|WP_003438590.1\|2504184_2504550_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.91636e-23
NZ_CP019870.1\|WP_003438541.1\|2523018_2523963_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.85297e-26
NZ_CP019870.1\|WP_003429376.1\|2505401_2506076_+\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.38574e-53

>NZ_CP019870.1|WP_003438571.1|2512248_2513982_+|diguanylate-cyclase
MSILLKKAPKLAKHIITSFYINRDIDEVLKYLCENVTWIGPGEQEFLTSFNEIKNYFYAGQDEIPSCDINNDIFETVSEDENRCMVLGRYTVRTKENTQMILEVNQRCTFEIIEDRGKLLVKHMHISNPYGEMQLDEYFPTKIGTQSYDYLQRLLKEKTEVIEMITNNINGGLKGSNDDNTYSFFYVNEGLPKILGYTYDEFMEMSGGSAVGAVYPPDLPKALEDCERCFAKGPTYSSEYRIRKKDGTLMWVLDSGMKSLNSDGIVKINSIITDITQLKNIESELKLERERYRIALQNITDIMFEYDIENDTLIKYQRVEIDKKIELENFETKNYSKLLESGKIIHLDDIGKLLEVLHGNLRETIEIRQVNSLTKNEWRWIRVQCSVIYDSDHNPIKTIGVLKDITEDKSKLESLINQAQRDPLTQLYNQRVSQNLIEEYLCSSDSKNNDALLVIDIDDFKTVNDTFGHLEGNEVLVAVSKILLHNTHDKDIVARIGGDEFTIFIKSLTKDLIIKITNDILNDASKIKVKDNHKITLSIGIAFTDDSTKLYKDLFSKADKALYLSKADGKNCYSTYE
>NZ_CP019870.1|WP_003438573.1|2511175_2512009_+|GGDEF-domain-containing-protein
MFKEIFLRTFPGFLIIRDSNYRIIFINDNLKNLIKSYMQDNPLGMTNIEIAKKLPDNIAKFFTDSHNIQLDWEKNYPYDKISNWILEFKKDTTSYWNVLEYKVDVDEKTYIITMANDITKLYEENKRNLHYSITDPLTGAYNRKYLNDRFDIFIGDYIVLIDLDNFKMINDYEGHNVGDKILCDFVSLLNKELINSTSIIRLGGDEFIVIFSSDVDKNYVYSQLEALRENFLKVFSKYKYLSFSYGVDTVKRNLKLTIVELDKKMYKNKKKFDKNDY
>NZ_CP019870.1|WP_003438580.1|2508910_2511145_+|EAL-domain-containing-protein
MQNHNYIKMLNKKVEVLSKELDSRNFKLKTLNEIDFFSKIPNREFMYQHIDDCISKNIHIGIMLLNIDNFKLFNDIYGYLVGENLLITLTQNLLHFIPESKGIVAYLKGEGFLIVLPNVSNKELNNMGATIIESARELKIKLPNEKEIYSNVTFSIGSTIWNGEPNMTTLMLFNQVYSALKKAKSEGKNRYILFDFKDNSFYNKLENDKEFLSEISHVLQTKQIEVFYQPLYNIKNNTIVGCEALARWRHPIKGLLTPDKFIPLFEQFGLITELDLHLFEENCKNIRRWIDNNDVFVPICCNFSRLHFFNPNFPSMLKGITEKYSVSTSNFSIEITENILIENTNTIIQQLAELRSYGFSVSMDDFGSGYSSFGMLQNLPFDIIKIDRIFLSHNLNDFKNTTILYSIINIARALGMLTVCEGVETEQHVEFIKSINCDIAQGYYYAKPMECKEFEKLLSKENNSEKMFIKYSDIGKSLIEKIFDGFFIMQDMKKLRANVTEDIQWFDFYNKTEITSFPKVIEHFEKHIKGKKFSILYKSITPHNTESDSLLISGEAVLSDEASEHQKYSNFYFSANCIISENKLLLAKLHLDLIKTAGYINEFESYSIPKMTNTHLDESNILSQFYSMLPVGIIRYDLFGDMIITYMNEEMFDIIGYTKEQFFGEMGGNLRAIVHPDDLDFVYKKSLDMIDTNKIEPFLYRFIKRDGQIVTVMYTQCNLSAIDGRSIAQGMYVDVNKIKNLTKI
>NZ_CP019870.1|WP_003438582.1|2507317_2508127_-|MerR-family-transcriptional-regulator
MKDYYKIGEISKIYGIGRDSLMYYEEIGILRPVRDINGYRMYNISDIWKLNLIKEFRSLNFPMKKIKEYLDDRSIESTKNILNEELDLIDKKIAEFISHKENIIKRLSSIESVIQNTKIDEIEVVYIEKRKALELNADIKRDEDFDFLIQKLQKEYEDRFNILGNNNIGSAFSTEAINKGIFNEFKSVFCFLESNEKVYNIVFDEGYYVTLNYTGSNSNNKIYMEKVFKFIEENNYKIIADPIEIYKIDIHETGIVEEFVTEIQVPITK
>NZ_CP019870.1|WP_003438585.1|2506944_2507184_-|hypothetical-protein
MKCSNCGSVNIEKGILTTGGIYAETIGLKYRGDGKLDKVINKTFPVQSTIYSDLCLDCGEIVRTYIKDNTDRNWCKDKK
>NZ_CP019870.1|WP_003429374.1|2506580_2506757_+|hypothetical-protein
MFRDEMDKCTHMLTAYISSLYDYCDFIDTQLDDFILEYGENVVESCLHQVMVLVSKYN
>NZ_CP019870.1|WP_003429376.1|2505401_2506076_+|MgtC/SapB-family-protein
MNHHILIQFEYIARIITAGFCGALIGYERKNRLKEAGIRTHFIVALASALIIIVSKYGFNDIVGTPGIGLDPARVAAQVVSGIGFLGAGLIFIRNQSVSGLTTAAGIWATAGTGLAIGSGLYLVGIVSSIIIVIVQITLHRDRKWMKLPTAEQVSLKISNSTDSIEYIEGKFKKSNIEIINMNIKRLDGDWLEVVIYTKLPKGYKKTNLLKLFSDNPLIETLEI
>NZ_CP019870.1|WP_003438588.1|2504627_2505182_+|cysteine-hydrolase
MSIALILIDIQNDYFKNGKCELFQSEETAENAKKILLFFRKNNLPVIHIQHISTDKTASFFLPNTHGSEINKIVFPLDNEEIITKHTPDSFFETDLQSILEKKNITNLVICGMMSHMCIDTSVRTAKKLRYDITLISDACTTKNLSWNNIEINANTVHQVFMASLQNSFADVKNTDKFLSNYHK
>NZ_CP019870.1|WP_003438590.1|2504184_2504550_+|helix-turn-helix-transcriptional-regulator
MKIRAEYTCLLEIVHDIIKGKWKTILIFELRQSNKTFSELQHNIYGINQKMLIQQLKELRDFGIIDKISSAGYPLHVEYFLTNRGKKMLKAVEIMQEIGIEYMLEHGQQEILDNKGICYNK
>NZ_CP019870.1|WP_003438593.1|2502934_2503720_-|GNAT-family-N-acetyltransferase
MIVKIDNTLEKEFWQYVSHEESLNLFIIGYVENYGFSSQYQDIWSQVEDGNITSIILKNKSTLIIYSFKNNFNIGEMKNHIKDLDVESISGKKCVIDRLISKYKDFYEKLDNKFCVLKEIKEIDFSNMKEYKIENAQEKDIDEIGKLLNRSDYKVSKNYIEERKVHLKEGNVRAYFIRNDDTMISTVSTGMETSFLAMVVSVSTDKRYRGKGLASYMVYNLSKELLLEGKVPCLFYNNDVAGKIYHNIGYKEINEWTILFK
>NZ_CP019870.1|WP_077699382.1|2515197_2515302_-|IS3-family-transposase
MDDYIYYYNNFRYQNRLNSMSPFEFRKYLSTERA
>NZ_CP019870.1|WP_003438567.1|2515926_2516172_+|hypothetical-protein
MNQKKIKISIKMVIIGIFAVIIAFVLSRLFVEYIDELLRSNWQYQLFESESSYIVFANCIMFSNILLEIFLIYICRKFRKI
>NZ_CP019870.1|WP_003438554.1|2516924_2517071_-|hypothetical-protein
MVFETFDKTIELYPNAKPIFHSDIGFRLDDESFEEYLGRVFRKRCKGI
>NZ_CP019870.1|WP_003438549.1|2518356_2519712_+|MATE-family-efflux-transporter
MDTKISINENMSLGKRFFKYLAPSVVAMWVFSLYTMVDGIFVSKGVGELALAAVNISMPFINFIFAVSLLFSTGASTIIAIYLGKKDIKSANEVFSFNLVSIIILSIIILAITFFNLDRLALFLGATESTIGMVKDYLGIIIFFNGFFIVSYSLEVIIKTDGFPILATVGVIISALTNIILDYLFVIEFGWGVKGAGIATGLSQVFSTIFFLIHFLRKNSTLNFSKFRIDFKTLRKIVFIGFPDSTTELSCGIVVLLFNLSLTKYIGENALIYYSVINYINTLVLMTMMGITQGMQPLTSFYYGAGNIDNVKKLLKMGIKATIIASVAVFAICMAFSGPIVSLFIHPEETMLFNEGVRVFKIFSISFLLVGINVIISGFFVSVEKPSISTVISLGRGLVIVVLSLISMILIFGGQGIWMTTIVSEFICLILSLVFLKKNFSTLDSNLNKVA
>NZ_CP019870.1|WP_003429358.1|2519829_2520498_-|diphthine--ammonia-ligase
MKEVLKLADEKFVMSFSGGKDSILALNRMLKKGYKPVALLTTISEEHGKSWTHNLEYNMLKQVSSNIGLPLLVAECGVEGYEESFERALIKAKNMGATICAYGDIDIESHRKWDTDRCEAVGMKVDLPLWQESREDLVYEFIDSGFCSVVTKVNLKHLGEEFLGKKLTRELVEKIKNAGADPCGEHGEYHTFVVDGPIFKKPVEYEVKGTLIKDGYGYLEIK
>NZ_CP019870.1|WP_003429356.1|2520564_2520993_-|DMT-family-transporter
MTKLWAIIFALLAGGSTALEAFINGELGKSTTALVATFISLTVGAIFFLASIIVTGDLKCLVSINGFNYKLLLGGVFGGLIIYFTVKAIPNLGVSNTLILTLVSQVLVGFFIDSVILGQETMHLYKYIGVILLILGTFFIVN
>NZ_CP019870.1|WP_003438546.1|2521099_2521693_+|DUF308-domain-containing-protein
MNFCYNCSIDFGGDFMYTNFNIDFNNFNKKENAIKFMLMGVLLIILGLLCLTFKTLGIKLISWTFGIALLFFAYLNLKNINELKRYATKEEIKPSINIQWVLIIACILLFVFPQKIQSIFSLFLGFYLIFNQLVALVNSKNNPYSKFTTWNIVKILFGICLILSPLFLSRFIVSIMSFFIILFGLVLFFSGNTARKY
>NZ_CP019870.1|WP_009902494.1|2521811_2522747_+|TIGR01212-family-radical-SAM-protein
MDKFKYAFDNKRYHTWNYYLRNTFGEKVFKVSINAGFTCPNIDGSLGYGGCTYCSKEGSGDFAGNPKDNLISQFYNIKEMMLKKWPHAKYIGYFQAYTNTYAPLEVLKEKYETILELEDVIGLSISTRPDCLPDDVVEYLSELNKRTNLWVELGLQTIHDSTSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMMETAKAVGKMGVDGIKIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIHRLTGDGKRDELVGPIWSLKKWEILNQIDDTLKARNSYQGCKFV
>NZ_CP019870.1|WP_003438541.1|2523018_2523963_-|EamA-family-transporter
MGEKSKGYVFIAIAGLLWATLGLFGKFLMGNGLTSEQVAFTRLFFGFIVLGVYSSIRTPQILKISKKGIIYSVIIGIICQAMFNLCYFKAIDIAGVSIAAVLLYTSPLFLAIFSKICYKENITRSKLFSLILCFIGAIMAVTGGRLDFQGLNAFGLLLGVLSAIAYALMPTISKNALKEFSSSTILVYSFLFGAIFMIPSSRPWEILNYAKDLDVLSCMLMLGIVPAALAYIFYAAGISKGVELSVAGVVASVELVGSVIIGCTILGESFSLGKLFGVMLMLISAVVALNLSYDEIRIFYKSNKLKQIEKTESI
>NZ_CP019870.1|WP_003438538.1|2524280_2525711_+|sigma-54-interacting-transcriptional-regulator
MNLDLEFYQKILEASHDEICVSDDKGIIIYCNKAFEENYGLKKEDILGKNVSFLEDSGYSTKSPIPIVLKTKTKFSLEQDTQTGKKLIITATPIFDENGNLEFTVENCRDITELNNIKNKLEDTKKQVKKYKSEVETLYRTALRIEDTVIMDGIVMRPIINTVNHVSKTDVSVLLLGESGTGKSSLARYIHHNSNRSNGPFITINCATISPQLLESELFGYTSGAFTGASTKGKVGLVELANGGTLFLDEIGDIPQNLQAKFLQLIQDRTFTPVGSLKNKKVDIRIISATNVDLVSKVKEKKFREDLYYRLNVIEIKLPPLRERRDNLVEIIKYYFNRYSSDFNLNKTISKEAMDAIANYRFPGNIRELQNIIQKILLTCTDNHITIDDLPNILTKNIHITNNGNKTHISQINKVIISDSKSTNYKNKNFDTLIKEYEKNIILDAYEKFGSSYKVAKHLEISQSKANRLIRKYTNT

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Crispr_ID: NZ_CP019870_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_15

2722783-2723141

Orphan

I-A

Consensus_repeat	Method
CTTTACATACCACTTAGTTAATATAAAAC	CRISPRCasFinder
CTTTACATACCACTTAGTTAATATAAAAC	CRT
GTTTTATATTAACTAAGTGGTATGTAAAG	PILER-CR

5 spacers

The CRISPR arrays of NZ_CP019870_15

>merge|NZ_CP019870|15|2722783-2723141|CRISPRCasFinder,CRT,PILER-CR
CTTTACATACCACTTAATTGATATAAAACAGTATAAAAATTAGTTACAGATGTATCTTTTTTGTTCTTTACATACCACTTAGTTAATATAAAACTATTAATTTTCCTATGCTTGTACTCATACTCAAAAAGCTTTACATACCACTTAGTTAATATAAAACGATTGTTATTTTACGAAAGGTACGGTCGTAATTTACGACTTTACATACCACTTAGTTAATATAAAACAAGCTAGCGGGGATAGACAATATAAATATCAACACTTCTTTACATACCACTTAGTTAATATAAAACAAACGGAATATATATATACAGAGCTTAGAGGGGAACACTTTACATACCACTTAGTTAATATAAAAC

>NZ_CP019870|15|14|2722783-2723141|CRISPRCasFinder
CTTTACATACCACTTAATTGATATAAAAC	AGTATAAAAATTAGTTACAGATGTATCTTTTTTGTT
CTTTACATACCACTTAGTTAATATAAAAC	TATTAATTTTCCTATGCTTGTACTCATACTCAAAAAG
CTTTACATACCACTTAGTTAATATAAAAC	GATTGTTATTTTACGAAAGGTACGGTCGTAATTTACGA
CTTTACATACCACTTAGTTAATATAAAAC	AAGCTAGCGGGGATAGACAATATAAATATCAACACTT
CTTTACATACCACTTAGTTAATATAAAAC	AAACGGAATATATATATACAGAGCTTAGAGGGGAACA
CTTTACATACCACTTAGTTAATATAAAAC

>NZ_CP019870|15|9|2722783-2723141|CRT
CTTTACATACCACTTAATTGATATAAAAC	AGTATAAAAATTAGTTACAGATGTATCTTTTTTGTT
CTTTACATACCACTTAGTTAATATAAAAC	TATTAATTTTCCTATGCTTGTACTCATACTCAAAAAG
CTTTACATACCACTTAGTTAATATAAAAC	GATTGTTATTTTACGAAAGGTACGGTCGTAATTTACGA
CTTTACATACCACTTAGTTAATATAAAAC	AAGCTAGCGGGGATAGACAATATAAATATCAACACTT
CTTTACATACCACTTAGTTAATATAAAAC	AAACGGAATATATATATACAGAGCTTAGAGGGGAACA
CTTTACATACCACTTAGTTAATATAAAAC

>NZ_CP019870|15|8|2722848-2723141|PILER-CR
CTTTACATACCACTTAGTTAATATAAAAC	TATTAATTTTCCTATGCTTGTACTCATACTCAAAAAG
CTTTACATACCACTTAGTTAATATAAAAC	GATTGTTATTTTACGAAAGGTACGGTCGTAATTTACGA
CTTTACATACCACTTAGTTAATATAAAAC	AAGCTAGCGGGGATAGACAATATAAATATCAACACTT
CTTTACATACCACTTAGTTAATATAAAAC	AAACGGAATATATATATACAGAGCTTAGAGGGGAACA
CTTTACATACCACTTAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_003433383.1\|2718844_2719189_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003438167.1\|2730317_2731565_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP019870.1\|WP_003438188.1\|2714867_2715377_-\|glycopeptide-resistance-protein-VanZ1	unknown	unknown	gnl\|CDD\|377417
NZ_CP019870.1\|WP_003419254.1\|2728200_2728485_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|180266
NZ_CP019870.1\|WP_003438160.1\|2735218_2736031_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|350160
NZ_CP019870.1\|WP_003438185.1\|2715696_2716086_-\|BlaI/MecI/CopY-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367747
NZ_CP019870.1\|WP_003438166.1\|2731551_2732226_-\|O-methyltransferase	unknown	unknown	gnl\|CDD\|226607
NZ_CP019870.1\|WP_003419270.1\|2720908_2721160_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003438171.1\|2724096_2725524_-\|cell-wall-binding-protein-Cwp26	unknown	unknown	gnl\|CDD\|380277
NZ_CP019870.1\|WP_003438169.1\|2726660_2728178_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|238206
NZ_CP019870.1\|WP_009896135.1\|2733689_2735015_-\|pyrimidine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|274244
NZ_CP019870.1\|WP_003438168.1\|2728581_2730246_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|223839
NZ_CP019870.1\|WP_003433385.1\|2719315_2719699_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003438173.1\|2721405_2721561_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003433376.1\|2716808_2716982_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003438164.1\|2732397_2733477_-\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|376862
NZ_CP019870.1\|WP_003438172.1\|2722271_2722496_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP019870.1\|WP_003438176.1\|2718446_2718662_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003438170.1\|2725714_2726536_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP019870.1\|WP_009902375.1\|2717144_2717462_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_003438167.1\|2730317_2731565_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	4.69627e-145
NZ_CP019870.1\|WP_003438188.1\|2714867_2715377_-\|glycopeptide-resistance-protein-VanZ1	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	5.6607e-17
NZ_CP019870.1\|WP_009896135.1\|2733689_2735015_-\|pyrimidine-nucleoside-phosphorylase	gnl\|CDD\|274244	TIGR02644, Thymidine_phosphorylase, pyrimidine-nucleoside phosphorylase. In general, members of this protein family are designated pyrimidine-nucleoside phosphorylase, enzyme family EC 2.4.2.2, as in Bacillus subtilis, and more narrowly as the enzyme family EC 2.4.2.4, thymidine phosphorylase (alternate name: pyrimidine phosphorylase), as in Escherichia coli. The set of proteins encompassed by this model is designated subfamily rather than equivalog for this reason; the protein name from this model should be used when TIGR02643 does not score above trusted cutoff. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
NZ_CP019870.1\|WP_003438185.1\|2715696_2716086_-\|BlaI/MecI/CopY-family-transcriptional-regulator	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	1.30786e-22
NZ_CP019870.1\|WP_003438166.1\|2731551_2732226_-\|O-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	2.98869e-60
NZ_CP019870.1\|WP_003438171.1\|2724096_2725524_-\|cell-wall-binding-protein-Cwp26	gnl\|CDD\|380277	NF033435, S-layer_Clost, S-layer protein SlpA. In Clostridiodes difficile, the S-layer protein precursor, SlpA, is one member of a large paralogous family of protein that share several cell wall-binding repeats. SlpA is cleaved into a larger and smaller protein. The S-layer protein itself is important to adhesion, and portions of it are highly variable, and then N-terminal and C-terminal are well-conserved.	1.25152e-17
NZ_CP019870.1\|WP_003438169.1\|2726660_2728178_+\|recombinase-family-protein	gnl\|CDD\|238206	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain. These enzymes perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase. Serine recombinases demonstrate functional versatility and include resolvases, invertases, integrases, and transposases. Resolvases and invertases (i.e. Tn3, gamma-delta, Tn5044 resolvases, Gin and Hin invertases) in this family contain a C-terminal DNA binding domain and comprise a major phylogenic group. Also included are phage- and bacterial-encoded recombinases such as phiC31 integrase, SpoIVCA excisionase, and Tn4451 TnpX transposase. These integrases and transposases have larger C-terminal domains compared to resolvases/invertases and are referred to as large serine recombinases. Also belonging to this family are proteins with N-terminal DNA binding domains similar to IS607- and IS1535-transposases from Helicobacter and Mycobacterium.	2.03703e-29
NZ_CP019870.1\|WP_003438168.1\|2728581_2730246_-\|penicillin-binding-protein-2	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	5.50889e-97
NZ_CP019870.1\|WP_003419254.1\|2728200_2728485_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|180266	PRK05803, PRK05803, RNA polymerase sporulation sigma factor SigK.	1.70744e-41
NZ_CP019870.1\|WP_003438164.1\|2732397_2733477_-\|endolytic-transglycosylase-MltG	gnl\|CDD\|376862	pfam02618, YceG, YceG-like family. This family of proteins is found in bacteria. Proteins in this family are typically between 332 and 389 amino acids in length. This family was previously incorrectly annotated and names as aminodeoxychorismate lyase. The structure of YceG was solved by X-ray crystallography.	3.18128e-117
NZ_CP019870.1\|WP_003438160.1\|2735218_2736031_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|350160	cd09009, PNP-EcPNPII_like, purine nucleoside phosphorylases similar to human PNP and Escherichia coli PNP-II (XapA). Human PNP catalyzes the reversible phosphorolysis of the purine nucleosides and deoxynucleosides inosine, guanosine, deoxyinosine, and deoxyguanosine. Patients with PNP deficiency typically present with severe immunodeficiency, neurological dysfunction, and autoimmunity. Escherichia coli PNPII, product of the xapA/pndA gene, catalyzes the phosphorolysis of xanthosine, inosine and guanosine with equal efficiency and has been referred to as xanthosine phosphorylase and inosine-guanosine phosphorylase. E. coli PNPII is also capable of converting nicotinamide to nicotinamide riboside, and may be involved in the NAD+ salvage pathway. It is one of two purine nucleoside phosphorylases found in E. coli, which also contains PNPI, which displays a different substrate specificity and belongs to a different subgroup of the nucleoside phosphorylase-I (NP-I) family than PNPII. NP-I family members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	4.11863e-175
NZ_CP019870.1\|WP_003438170.1\|2725714_2726536_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.11852e-08
NZ_CP019870.1\|WP_003438172.1\|2722271_2722496_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.71814e-08

>NZ_CP019870.1|WP_003438172.1|2722271_2722496_+|helix-turn-helix-transcriptional-regulator
MDVNQRIKYIRENMNSSQKELLEKTNINTSVMNRIESGERPTRDDGLIIFAKIFGLYTDYILGLSDTEKLNIGN
>NZ_CP019870.1|WP_003438173.1|2721405_2721561_-|hypothetical-protein
MALDVKIEVKIIKDVVILNITHWKKETSLLTVKIARSQGDLSYVKYFANES
>NZ_CP019870.1|WP_003419270.1|2720908_2721160_-|hypothetical-protein
MSSYFITRGDVMKILQQFKPYKYDKEKNIEYDEKIIANQNTEVYIVYPRISDEENRRRWEEFNEVAKEVAINIAMKKVETVES
>NZ_CP019870.1|WP_003433385.1|2719315_2719699_+|hypothetical-protein
MRKKFFIGILIVLIISVIAILNIKNDKNVFIGESENWKAKFVTTEGHSKLEIKYKNSKDVVEQKFNYSYQFIDGEDAVVVVKNEILEAGQEKAIKIQRPGLYSNRESSYKLIISWNGNEETINLKKK
>NZ_CP019870.1|WP_003433383.1|2718844_2719189_-|hypothetical-protein
MNYRLKKSVTTILSLLIMTILLPTNASASKVEDSSMKVMYSEKQVTDMDKLYDMAKNGITDVKSSNEKGIIKNARTGESIYVDSISTTQLLEVKQSKNLTSKIYSKTVFLILIQ
>NZ_CP019870.1|WP_003438176.1|2718446_2718662_-|hypothetical-protein
MHINQTGFISNELGIKQQQKKEPTSNSFSYNAPSSWKPVGRDSVQYNCGFELIATLVRGGSSWAFNFIVQP
>NZ_CP019870.1|WP_009902375.1|2717144_2717462_+|hypothetical-protein
MNFRNIYLILMGLGIIILTTIISLIEIKIGFCNEKYFNKLESKYGNIDRKRTIKLEVLYRYVTGFEYIAIGLFTKRLDITIIAIILVATITVILYYLVRKRYITI
>NZ_CP019870.1|WP_003433376.1|2716808_2716982_-|hypothetical-protein
MNDATKVSIKNETNNIMNLCNLLSWNALLQNNKINAETIAKSRYFIIILSPIDFYRL
>NZ_CP019870.1|WP_003438185.1|2715696_2716086_-|BlaI/MecI/CopY-family-transcriptional-regulator
MKINKLPHAELKLMKYIWGVDDVLASRDIIEDMKLKYDWKKSTTLTFLKNLVDKGFLTTDKVDRCTHYTIAIKEKDYLKVETKSFFSFMHNNSFKSFISALHDDEVLDSKSLDKLEEYFKNLKEEDIDD
>NZ_CP019870.1|WP_003438188.1|2714867_2715377_-|glycopeptide-resistance-protein-VanZ1
MKSRKHNITKGLFIVYIIILTWIILFKLQFDISSLETMNLRSINLIPFAGSLIINNRVDISEIILNVAIFVPFGIYVCMLKEEWSFIKKVIPIFITSLVFETLQYIFALGASDITDLIGNTLGGIIGIAVFMLLSKIFKNNTIKIINVLALIVTIIVVLFLGLVIFANL
>NZ_CP019870.1|WP_003438171.1|2724096_2725524_-|cell-wall-binding-protein-Cwp26
MKIKKLLTIGLSLSIFIASCPISANALDKIESIKGADKYETAGIIADKQNYTTAILINADSTMSDGLSASGLAGAINAPILLTKKNNIPNATLKRLEKAKKVYIIGGENSIDKYTETVLKGKGIEIKRLQGSDRIKTSYNVAKEINSINKVNKVILTNAFKGEPDAMSVAPVAVRDKAAIVLTDGKSVPFNTTGVESYVIGGTSSMNDKIVKDTNSTRLGGTDRYDTNKKIINKFYSGVKEFYIASGTDLVYALVGSTAAKNNAIVLVDNDSNKSVLKSTTKLTAIGNLSDSILQQCLNVTKNIGDSNTGREYTVEDAANAVKKLLGVKKFYYKPNYSEDEDLIFLLDKNFDFSGKEYYVFAYIKQGAEGDVRYCVAKNDMSKVYTYDVNGNMKVCNPDDYKNKGSITEEQAKQIALKECAKRHKVSINNLVVDMIDFRDDIYSGNVYAVKINSKNSNGTFGWFFIDIETGKVYN
>NZ_CP019870.1|WP_003438170.1|2725714_2726536_+|tetratricopeptide-repeat-protein
MIISKKITAILVSFLIMISMVGCAPKESATEVAKKYLDSIKIKDYEVAYNLLSKDSKESVSLEKFEEYQDTLFKLQTLKDYKLGEENKVEKYKYSNKEYTNLVKIKETDTIKYITENKEDTANFDRYFIIEDNEYKLLWHKDFKRALSSNYVKIARSETEKDEDKDYNKAAIDIKKAIEIDDKNPLAYYTQSYIYIELQRYDEALKSIDKYLEYLDKNNEAYKIDASDAYNLRGVIFMSKSEFNKARESYNKALELNPDNEYAKTNLNDIKGL
>NZ_CP019870.1|WP_003438169.1|2726660_2728178_+|recombinase-family-protein
MSVAIYLRKSRADEEAEKQGEFETLSRHKSTLLKLAKEQNLDVIEIKEELVSGESIIHRPKMLELLKEVEENKYDAVLVMDLDRLGRGDMKDQGIILETFKESKTKIITPRKTYDLTDEFDEEYSEFEAFMARKELKLISRRMQRGRIKSVEEGNFIGTSAPFGYDAVTTGRKERILVPNKDADVVRTIFDLYINEDMGCSKISKYLNNLGIKTATGANWYNSAITNIIKNKVYCGYIQWQKKDYKKSKNPNKIKTVKLRPKDEWIEAKGKHEPLISEITWKKAQNILKKNGHVSYGNQIKNPLAGIVICKNCGRPLVYRPYADHDYIICYHPGCNKSSRFEFIEAAILKSLEDTVKKYQLKASDIDLDKNNKDSNIEFQKRVLKGLETELKELGKQKNKLYDLLERGIYDEDTFIERSNNISSRTEEIKDSIKTVKNRLSTVKKDNSKIIEDIKTVLSLYHDSDSLGKNKLLKSVIDKAVYYKSKEQKLDSFELMVHLKLHEDQ
>NZ_CP019870.1|WP_003419254.1|2728200_2728485_+|sigma-70-family-RNA-polymerase-sigma-factor
MCNEISLLDILGTEANYVLDEVELKVQVGKLYEQLNKILTPREREIVQLRYGLTPYGYKTQREIAQKLDISRSYVSRIEKKALKKLEKELVQES
>NZ_CP019870.1|WP_003438168.1|2728581_2730246_-|penicillin-binding-protein-2
MSKKKTPFLKKVGKRSWCIFTIILIIYSVLIYRLVDIQVLKGDKYKQSVESQSVEKVELNSGRGIIYDRNNKKLTDTSKSQVLIVEKEKLNNNYKILELIKKATKMNDLDIYKAVQEQLTRPIIQIQTKNIDKSMKKELEKNGIMVEEKTMRYAKDGLLSHTIGYIKEDDKSGQSGIEKSMDSVLRNSNEKYISAFKAGDAGNEKSLNILKGSVKTVDNKDKDRHLKTTIDYNIQKKLEQILNKEENPTAAIISEASTGEILAMCSRPNFDQNDISKSLKGKNGEFENRVIKATYPPGSVFKMVVLFSALENGVIDENYTYNCTGKTKVGNTNEILRCNKRDGHGFQNLRQAFSNSCNPAFLDIAMKLGKEKILKSAEKLHLFEKVDIGLDEEKIREAPKNISIRNLAIGQENIEFTPLQINQMTQIIANNGTFKPLYLYKSLVDNNMNTIKTYKSSKKEELISPYVCTQVKEYMKSVSRIGTAKDLKDIEGGCGVKTGTAQSSLNKKAIDHGWITGFYPEERPKYVITVLVEGTQKGNKSATPIFKEICESIK
>NZ_CP019870.1|WP_003438167.1|2730317_2731565_-|U32-family-peptidase
MELNKVELLAPAGDLERLKIAITYGADAVYIGGEIFGMRSAAKNFSKEDMAEGVAFAHERGKKVFVTVNIIPHNEDFLQLEDYLLELEEIGIDAVIIADPGVLSVIKKVIPNMEIHLSTQANTTNYLSANFWYEHGIKRVVVARELSFDEISEIRAKTPLDMDIEAFMHGAMCISYSGRCLISNYMTGRDANKGSCAQSCRWQYHLVEEKRPGEYFPIYEDERGTFFFNSKDLCMIEYIPELIKSGITSLKIEGRMKTAYYVATVVRAYRMAIDEFYRDPENWKFNPMWMEELKKGSHRHFTSGFYLNKPTTEDQNYQSASYVRNYDFIGIVRETEDEDGLIVVEQRNKMCVGDEIEVMGPYKETMFTKIEEMYNEEGEAIESAPHPRQIVKLKLSVKVGKDYMLRKVIEEKVEE
>NZ_CP019870.1|WP_003438166.1|2731551_2732226_-|O-methyltransferase
MSNIVNDLVEDYIRVTLKEKEGFLKDLEIYAEENSVPIIHKEVSDLLKVLLKVQKPKRILEVGCAIGYSSIFFATIIGKDADIITVERNEKMIEKAKENIKLAGFDNNITILEGDAEEKLSQVQGEFDLIFIDAAKGQYKLFFDLVIDKLKDGGLLVSDNILYKGMVAHDDFVVRRKKTIVKRMRNYLDYICNCDYLSTSLVPIGDGVALSYKESKRGDVDGIK
>NZ_CP019870.1|WP_003438164.1|2732397_2733477_-|endolytic-transglycosylase-MltG
MNFKENRLKIAVLIIVILIILAGIFVFIQIGPYDKNNKKDVIIDVPSGASVGKISDILYENKLIKNELLFKLLVKVSNKAPSIKSGTYLLNQSYSNNDIISLLVSGKIYQDGIKVTIPEGATSKEIIAMLVSKNLGDKATFENLIKKPQEFYDKFPYLKEDGITSLEGFLYPETYYFNSKKQSEEDILSEMLKVFDSKYTDKFKKKQKELNMTLQEVMEMASIIEKEAVLDKDRPIIASVFYNRLKVGMPLQSDATIQYIFEERKKIVTYDDLKIDSPYNSYKNKGLPPTPISNPGIKSIEAALYPEKTDYLYFVAKIDGGNNYSTNYQDHLKYVKEYKEARDKQSKDTKATNKENTKK
>NZ_CP019870.1|WP_009896135.1|2733689_2735015_-|pyrimidine-nucleoside-phosphorylase
MRMYDIIKKKRDNLELSKKEINYFIENYSKGDIPDYQASALLMSIYLNKMNKQETVHLTEAMMNSGDMINLSEIDGIKVDKHSTGGVGDKTTIALIPLVASCGAPVAKMSGRGLGHTGGTIDKLESIPGFSTEMEISKFIDSVNKSKIAVCGQSAKVAIADKKIYALRDVTATVDNISLISSSVMSKKLASGADAIVLDVKTGDGAFMKTLEESFELAKSMVDIGTGMNRDTIGIVTDMDEPLGFAVGNSLEVIEAIETLKGNGPKDLVELCEVLGAYMLVLSKVAHDFEDGVEKIRESIKSGTAIQKLKEFIENQGGNKDVVDDYSLFKKSKYKYPVKSTKSGYISKIKAEDVGVSAMILGAGRETKDDILDLSAGIILEKKVGDYVNEGEVLAYMYYNDEQKLSLAKGRFIDSYSIVDSKIEKNKLIYGIVTKEEIKKF
>NZ_CP019870.1|WP_003438160.1|2735218_2736031_-|purine-nucleoside-phosphorylase
MFEKIAQSSKFINSKSDIKPKIGLILGSGLGDLANDIEDPVAIKYSEIPNFPVSTVAGHAGQLVIGKLEGKEVIAMQGRFHYYEGYSQKEATFPVRVMKELGVEILIVTNAAGGVNKEFKAGDLMLIRDHINFSGSNPLVGKNDDRFGARFPDMSDAYSSKYVDVVKNCAKECNIDVKEGVYMFFSGPNYETPAEVRMAQILGADAVGMSTVPEVIVASHSNIGVIGISCITNMAAGILNQPLSHEEVIETTQKVKSEFMNLVKTTVKNL

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Crispr_ID: NZ_CP019870_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_16

3296381-3296488

Orphan

Consensus_repeat	Method
TTTTTCTTCACTCTGCTTATATTATGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019870_16

>merge|NZ_CP019870|16|3296381-3296488|CRISPRCasFinder
TTTTTACTTACTCTGCTTATATTATGATACATAATTTAAACATTTTTCTTCACTCTACATTATGATATATTATTTAAATATTTTTCTTCACTCTACTTATATTATGAT

>NZ_CP019870|16|15|3296381-3296488|CRISPRCasFinder
TTTTTACTTACTCTGCTTATATTATGAT	ACATAATTTAAACATTTTTCTTCACTCTACATTATGATATATTATTTAAATA
TTTTTCTTCACTCTACTTATATTATGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_003434528.1\|3291297_3291852_-\|glycosylating-toxin-sigma-factor-TcdR	unknown	unknown	gnl\|CDD\|274357
NZ_CP019870.1\|WP_003440170.1\|3305368_3307435_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP019870.1\|WP_003434520.1\|3293339_3294533_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|223104
NZ_CP019870.1\|WP_003440172.1\|3303396_3305352_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP019870.1\|WP_003434531.1\|3283879_3290980_-\|glycosylating-toxin-TcdB	unknown	unknown	gnl\|CDD\|372383
NZ_CP019870.1\|WP_003440181.1\|3300667_3301042_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP019870.1\|WP_003440161.1\|3309839_3310520_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|372253
NZ_CP019870.1\|WP_004454330.1\|3273364_3274063_+\|glycosylating-toxin-anti-sigma-factor-TcdC	unknown	unknown	gnl\|CDD\|372196
NZ_CP019870.1\|WP_009892717.1\|3307772_3308423_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP019870.1\|WP_003440185.1\|3299167_3299806_-\|ABC-2-transporter-permease	unknown	unknown	gnl\|CDD\|379133
NZ_CP019870.1\|WP_003434540.1\|3283257_3283758_-\|holin-like-glycosylating-toxin-export-protein-TcdE	unknown	unknown	gnl\|CDD\|273708
NZ_CP019870.1\|WP_003434522.1\|3292758_3293139_-\|BlaI/MecI/CopY-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367747
NZ_CP019870.1\|WP_003440183.1\|3299808_3300666_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP019870.1\|WP_021368923.1\|3310516_3311443_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213235
NZ_CP019870.1\|WP_003440188.1\|3297427_3298162_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293807
NZ_CP019870.1\|WP_003440174.1\|3302190_3303381_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_106817044.1\|3282746_3282929_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_076629438.1\|3274397_3282530_-\|glycosylating-toxin-TcdA	unknown	unknown	gnl\|CDD\|372383
NZ_CP019870.1\|WP_003434542.1\|3283017_3283179_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003434518.1\|3294595_3295852_-\|chloride-channel-protein	unknown	unknown	gnl\|CDD\|239654

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_003434528.1\|3291297_3291852_-\|glycosylating-toxin-sigma-factor-TcdR	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	4.881e-07
NZ_CP019870.1\|WP_003440170.1\|3305368_3307435_-\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	1.77578e-91
NZ_CP019870.1\|WP_003434520.1\|3293339_3294533_-\|cation:proton-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	6.49968e-30
NZ_CP019870.1\|WP_003440172.1\|3303396_3305352_-\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	8.61058e-94
NZ_CP019870.1\|WP_003434531.1\|3283879_3290980_-\|glycosylating-toxin-TcdB	gnl\|CDD\|372383	pfam12920, TcdA_TcdB_pore, TcdA/TcdB pore forming domain. This family represents the most conserved region within the C. difficile Toxin A and Toxin B pore forming region.	0
NZ_CP019870.1\|WP_003440181.1\|3300667_3301042_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	5.01335e-31
NZ_CP019870.1\|WP_003440161.1\|3309839_3310520_-\|ABC-transporter-permease	gnl\|CDD\|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	0.00369696
NZ_CP019870.1\|WP_004454330.1\|3273364_3274063_+\|glycosylating-toxin-anti-sigma-factor-TcdC	gnl\|CDD\|372196	pfam12569, NARP1, NMDA receptor-regulated protein 1. This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with pfam07719, pfam00515. There is a single completely conserved residue L that may be functionally important. NARP1 is the mammalian homolog of a yeast N-terminal acetyltransferase that regulates entry into the G(0) phase of the cell cycle.	0.000149583
NZ_CP019870.1\|WP_009892717.1\|3307772_3308423_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	8.07001e-25
NZ_CP019870.1\|WP_003440185.1\|3299167_3299806_-\|ABC-2-transporter-permease	gnl\|CDD\|379133	pfam13346, ABC2_membrane_5, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	1.24481e-13
NZ_CP019870.1\|WP_003434540.1\|3283257_3283758_-\|holin-like-glycosylating-toxin-export-protein-TcdE	gnl\|CDD\|273708	TIGR01593, Uncharacterized_protein_CPE0383, toxin secretion/phage lysis holin. This model describes one of the many mutally dissimilar families of holins, phage proteins that act together with lytic enzymes in bacterial lysis. This family includes, besides phage holins, the protein TcdE/UtxA involved in toxin secretion in Clostridium difficile and related species. [Protein fate, Protein and peptide secretion and trafficking, Mobile and extrachromosomal element functions, Prophage functions].	1.98815e-24
NZ_CP019870.1\|WP_003434522.1\|3292758_3293139_-\|BlaI/MecI/CopY-family-transcriptional-regulator	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	2.26292e-07
NZ_CP019870.1\|WP_003440183.1\|3299808_3300666_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	8.85336e-71
NZ_CP019870.1\|WP_021368923.1\|3310516_3311443_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	7.80864e-94
NZ_CP019870.1\|WP_003440188.1\|3297427_3298162_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293807	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Bacillus subtilis yflN protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	1.29871e-61
NZ_CP019870.1\|WP_076629438.1\|3274397_3282530_-\|glycosylating-toxin-TcdA	gnl\|CDD\|372383	pfam12920, TcdA_TcdB_pore, TcdA/TcdB pore forming domain. This family represents the most conserved region within the C. difficile Toxin A and Toxin B pore forming region.	0
NZ_CP019870.1\|WP_003434518.1\|3294595_3295852_-\|chloride-channel-protein	gnl\|CDD\|239654	cd03682, ClC_sycA_like, ClC sycA-like chloride channel proteins. This ClC family presents in bacteria, where it facilitates acid resistance in acidic soil. Mutation of this gene (sycA) in Rhizobium tropici CIAT899 causes serious deficiencies in nodule development, nodulation competitiveness, and N2 fixation on Phaseolus vulgaris plants, due to its reduced ability for acid resistance. This family is part of the ClC chloride channel superfamiy. These proteins catalyse the selective flow of Cl- ions across cell membranes and Cl-/H+ exchange transport. These proteins share two characteristics that are apparently inherent to the entire ClC chloride channel superfamily: a unique double-barreled architecture and voltage-dependent gating mechanism. The gating is conferred by the permeating anion itself, acting as the gating charge.	8.4994e-154

>NZ_CP019870.1|WP_003434518.1|3294595_3295852_-|chloride-channel-protein
MIEKFKTLIWIKMIIKIKSVYKTYGGLFLLGLIGIPIGAIIGLIDTIFGTVLLKVTDIRETYPMYLIPFLAVVGVVIAYCYFKFGGKSSKGMNLIFEVGHGEEEIIPLRLVPFIILGTWLTHLFGGSAGREGVAVQIGATFSHWVGKRLPIKNASSIFLVTGMAAGFAGLFETPIAAILFAMEVLVAGSLEYQSLFPAFTASFTASAVSKALGLEKFSFALSSKVVFDLSIFWKLIVLGIIFGMVGGAFAWCLKLSKRKIGNRLKNPMIRIAIIGVCLSVLFLLFYKGRYSGLGTNLIQNSFYGGEIYSFDWLLKFILTILTLSAGFQGGEVTPLFSIGASLGVLLAGFFNLPIELVAALGYASVFGSATNTFFAPVFIGAEVFGYSYLPYFFVVCAISYIFNMDKSIYSLQKISTKQ
>NZ_CP019870.1|WP_003434520.1|3293339_3294533_-|cation:proton-antiporter
MLTSLALIFLLGMASGGIFKRIKLPNLLGMLLTGIILGPYVLNLIDNSILDISSDLRKIALIIILTRAGLSLDINDLKKVGRPAVLMCFIPATFEIVGMIVLAPKLLGVSILEAAVMGAVVGAVSPAIIVPKMLKLMEEGYGTEKSIPQMLLAGTSIDDIFVIVMFTVFTGLAQGNSISAISFLQIPVSIILGVIVGAVIGICLAVFFKKIHMRDSAKGVLLLSISFLMISLETALEGIVPFSGLLAVMSIGIFLQIKYRVVARRLSIKYSKLWVGAEILLFVLVGATVDISYAFKAGIGAVILIFGVLLFRMVGVFFCLIKTNLTIKERLFCMIGYIPKATVQAAIGGVPLAMGMASGQLILTLAVLAILITAPLGAFGIDVTYKKLLTSVKGENK
>NZ_CP019870.1|WP_003434522.1|3292758_3293139_-|BlaI/MecI/CopY-family-transcriptional-regulator
MCLKKLSKLELVIMKFIWNLDIKTNSYEIIDYMKEEHNLPEKVALKTLSKLSKKRFLYVQETGKCMYYTVAIKEKAYLEFISRNVQNLLKNNFIRNLLVSFHEEELTEEKIKSLENWVVNWEEAYV
>NZ_CP019870.1|WP_003434528.1|3291297_3291852_-|glycosylating-toxin-sigma-factor-TcdR
MQKSFYELIVLARNNSVDDLQEILFMFKPLVKKLSRVLHYEEGETDLIIFFIELIKNIKLSSFSEKSDAIIVKYIHKSLLNKTFELSRRYSKMKFNFVEFDENILNMKNNYQSKSVFEEDICFFEYILKELSGIQRKVIFYKYLKGYSDREISVKLKISRQAVNKAKNRAFKKIKKDYENYFNL
>NZ_CP019870.1|WP_003434531.1|3283879_3290980_-|glycosylating-toxin-TcdB
MSLVNRKQLEKMANVRFRTQEDEYVAILDALEEYHNMSENTVVEKYLKLKDINSLTDIYIDTYKKSGRNKALKKFKEYLVTEVLELKNNNLTPVEKNLHFVWIGGQINDTAINYINQWKDVNSDYNVNVFYDSNAFLINTLKKTVVESAINDTLESFRENLNDPRFDYNKFFRKRMEIIYDKQKNFINYYKAQREENPELIIDDIVKTYLSNEYSKEIDELNTYIEESLNKITQNSGNDVRNFEEFKNGESFNLYEQELVERWNLAAASDILRISALKEIGGMYLDVDMLPGIQPDLFESIEKPSSVTVDFWEMTKLEAIMKYKEYIPEYTSEHFDMLDEEVQSSFESVLASKSDKSEIFSSLGDMEASPLEVKIAFNSKGIINQGLISVKDSYCSNLIVKQIENRYKILNNSLNPAISEDNDFNTTTNTFIDSIMAEANADNGRFMMELGKYLRVGFFPDVKTTINLSGPEAYAAAYQDLLMFKEGSMNIHLIEADLRNFEISKTNISQSTEQEMASLWSFDDARAKAQFEEYKRNYFEGSLGEDDNLDFSQNIVVDKEYLLEKISSLARSSERGYIHYIVQLQGDKISYEAACNLFAKTPYDSVLFQKNIEDSEIAYYYNPGDGEIQEIDKYKIPSIISDRPKIKLTFIGHGKDEFNTDIFAGFDVDSLSTEIEAAIDLAKEDISPKSIEINLLGCNMFSYSINVEETYPGKLLLKVKDKISELMPSISQDSIIVSANQYEVRINSEGRRELLDHSGEWINKEESIIKDISSKEYISFNPKENKITVKSKNLPELSTLLQEIRNNSNSSDIELEEKVMLTECEINVISNIDTQIVEERIEEAKNLTSDSINYIKDEFKLIESISDALCDLKQQNELEDSHFISFEDISETDEGFSIRFINKETGESIFVETEKTIFSEYANHITEEISKIKGTIFDTVNGKLVKKVNLDTTHEVNTLNAAFFIQSLIEYNSSKESLSNLSVAMKVQVYAQLFSTGLNTITDAAKVVELVSTALDETIDLLPTLSEGLPIIATIIDGVSLGAAIKELSETSDPLLRQEIEAKIGIMAVNLTTATTAIITSSLGIASGFSILLVPLAGISAGIPSLVNNELVLRDKATKVVDYFKHVSLVETEGVFTLLDDKIMMPQDDLVISEIDFNNNSIVLGKCEIWRMEGGSGHTVTDDIDHFFSAPSITYREPHLSIYDVLEVQKEELDLSKDLMVLPNAPNRVFAWETGWTPGLRSLENDGTKLLDRIRDNYEGEFYWRYFAFIADALITTLKPRYEDTNIRINLDSNTRSFIVPIITTEYIREKLSYSFYGSGGTYALSLSQYNMGINIELSESDVWIIDVDNVVRDVTIESDKIKKGDLIEGILSTLSIEENKIILNSHEINFSGEVNGSNGFVSLTFSILEGINAIIEVDLLSKSYKLLISGELKILMLNSNHIQQKIDYIGFNSELQKNIPYSFVDSEGKENGFINGSTKEGLFVSELPDVVLISKVYMDDSKPSFGYYSNNLKDVKVITKDNVNILTGYYLKDDIKISLSLTLQDEKTIKLNSVHLDESGVAEILKFMNRKGNTNTSDSLMSFLESMNIKSIFVNFLQSNIKFILDANFIISGTTSIGQFEFICDENDNIQPYFIKFNTLETNYTLYVGNRQNMIVEPNYDLDDSGDISSTVINFSQKYLYGIDSCVNKVVISPNIYTDEINITPVYETNNTYPEVIVLDANYINEKINVNINDLSIRYVWSNDGNDFILMSTSEENKVSQVKIRFVNVFKDKTLANKLSFNFSDKQDVPVSEIILSFTPSYYEDGLIGYDLGLVSLYNEKFYINNFGMMLSGLIYINDSLYYFKPPVNNLITGFVTVGDDKYYFNPINGGAASIGETIIDDKNYYFNQSGVLQTGVFSTEDGFKYFAPANTLDENLEGEAIDFTGKLIIDENIYYFDDNYRGAVEWKELDGEMHYFSPETGKAFKGLNQIGDDKYYFNSDGVMQKGFVSINDNKHYFDDSGVMKVGYTEIDGKHFYFAENGEMQIGVFNTEDGFKYFAHHNEDLGNEEGEEISYSGILNFNNKIYYFDDSFTAVVGWKDLEDGSKYYFDEDTAEAYIGLSLINDGQYYFNDDGIMQVGFVTINDKVFYFSDSGIIESGVQNIDDNYFYIDDNGIVQIGVFDTSDGYKYFAPANTVNDNIYGQAVEYSGLVRVGEDVYYFGETYTIETGWIYDMENESDKYYFNPETKKACKGINLIDDIKYYFDEKGIMRTGLISFENNNYYFNENGEMQFGYINIEDKMFYFGEDGVMQIGVFNTPDGFKYFAHQNTLDENFEGESINYTGWLDLDEKRYYFTDEYIAATGSVIIDGEEYYFDPDTAQLVISE
>NZ_CP019870.1|WP_003434540.1|3283257_3283758_-|holin-like-glycosylating-toxin-export-protein-TcdE
MHSSSPFYISNGNKIFFYINLGGVMNMTISFLSEHIFIKLVILTISFDTLLGCLSAIKSRKFNSSFGIDGGIRKVAMIACIFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSILFILYESVSILKNMCLCGLPVPKRLKEKIAILLDAMTDEMNAKDEK
>NZ_CP019870.1|WP_003434542.1|3283017_3283179_-|hypothetical-protein
MKLIMKTREQMPRDTQVLNTYNFEASVHYYIDDKVVYQTLVHKDGAWSVGKIY
>NZ_CP019870.1|WP_106817044.1|3282746_3282929_-|hypothetical-protein
MRDEGQNDIENKYQTLINDLIDSLKVIGKIYKEIKTLKKYKICLQITIRQSPYLIEESIN
>NZ_CP019870.1|WP_076629438.1|3274397_3282530_-|glycosylating-toxin-TcdA
MSLISKEELIKLAYSIRPRENEYKTILTNLDEYNKLTTNNNENKYLQLKKLNESIDVFMNKYKTSSRNRALSNLKKDILKEVILIKNSNTSPVEKNLHFVWIGGEVSDIALEYIKQWADINAEYNIKLWYDSEAFLVNTLKKAIVESSTTEALQLLEEEIQNPQFDNMKFYKKRMEFIYDRQKRFINYYKSQINKPTVPTIDDIIKSHLVSEYNRDETVLESYRTNSLRKINSNHGIDIRANSLFTEQELLNIYSQELLNRGNLAAASDIVRLLALKNFGGVYLDVDMLPGIHSDLFKTISRPSSIGLDRWEMIKLEAIMKYKKYINNYTSENFDKLDQQLKDNFKLIIESKSEKSEIFSKLENLNVSDLEIKIAFALGSVINQALISKQGSYLTNLVIEQVKNRYQFLNQHLNPAIESDNNFTDTTKIFHDSLFNSATAENSMFLTKIAPYLQVGFMPEARSTISLSGPGAYASAYYDFINLQENTIEKTLKASDLIEFKFPENNLSQLTEQEINSLWSFDQASAKYQFEKYVRDYTGGSLSEDNGVDFNKNTALDKNYLLNNKIPSNNVEEAGSKNYVHYIIQLQGDDISYEATCNLFSKNPKNSIIIQRNMNESAKSYFLSDDGESILELNKYRIPERLKNKEKVKVTFIGHGKDEFNTSEFARLSVDSLSNEISSFLDTIKLDISPKNVEVNLLGCNMFSYDFNVEETYPGKLLLSIMDKITSTLPDVNKNSITIGANQYEVRINSEGRKELLAHSGKWINKEEAIMSDLSSKEYIFFDSIDNKLKAKSKNIPGLASISEDIKTLLLDASVSPDTKFILNNLKLNIESSIGDYIYYEKLEPVKNIIHNSIDDLIDEFNLLENVSDELYELKKLNNLDEKYLISFEDISKNNSTYSVRFINKSNGESVYVETEKEIFSKYSEHITKEISTIKNSIITDVNGNLLDNIQLDHTSQVNTLNAAFFIQSLIDYSSNKDVLNDLSTSVKVQLYAQLFSTGLNTIYDSIQLVNLISNAVNDTINVLPTITEGIPIVSTILDGINLGAAIKELLDEHDPLLKKELEAKVGVLAINMSLSIAATVASIVGIGAEVTIFLLPIAGISAGIPSLVNNELILHDKATSVVNYFNHLSESKKYGPLKTEDDKILVPIDDLVISEIDFNNNSIKLGTCNILAMEGGSGHTVTGNIDHFFSSPSISSHIPSLSIYSAIGIETENLDFSKKIMMLPNAPSRVFWWETGAVPGLRSLENDGTRLLDSIRDLYPGKFYWRFYAFFDYAITTLKPVYEDTNIKIKLDKDTRNFIMPTITTNEIRNKLSYSFDGAGGTYSLLLSSYPISTNINLSKDDLWIFNIDNEVREISIENGTIKKGKLIKDVLSKIDINKNKLIIGNQTIDFSGDIDNKDRYIFLTCELDDKISLIIEINLVAKSYSLLLSGDKNYLISNLSNTIEKINTLGLDSKNIAYNYTDESNNKYFGAISKTSQKSIIHYKKDSKNILEFYNDSTLEFNSKDFIAEDINVFMKDDINTITGKYYVDNNTDKSIDFSISLVSKNQVKVNGLYLNESVYSSYLDFVKNSDGHHNTSNFMNLFLDNISFWKLFGFENINFVIDKYFTLVGKTNLGYVEFICDNNKNIDIYFGEWKTSSSKSTIFSGNGRNVVVEPIYNPDTGEDISTSLDFSYEPLYGIDRYINKVLIAPDLYTSLININTNYYSNEYYPEIIVLNPNTFHKKVNINLDSSSFEYKWSTEGSDFILVRYLEESNKKILQKIRIKGILSNTQSFNKMSIDFKDIKKLSLGYIMSNFKSFNSENELDRDHLGFKIIDNKTYYYDEDSKLVKGLININNSLFYFDPIEFNLVTGWQTINGKKYYFDINTGAALTSYKIINGKHFYFNNDGVMQLGVFKGPDGFEYFAPANTQNNNIEGQAIVYQSKFLTLNGKKYYFDNDSKAVTGWRIINNEKYYFNPNNAIAAVGLQVIDNNKYYFNPDTAIISKGWQTVNGSRYYFDTDTAIAFNGYKTIDGKHFYFDSDCVVKIGVFSTSNGFEYFAPANTYNNNIEGQAIVYQSKFLTLNGKKYYFDNNSKAVTGWQTIDSKKYYFNTNTAEAATGWQTIDGKKYYFNTNTAEAATGWQTIDGKKYYFNTNTAIASTGYTIINGKHFYFNTDGIMQIGVFKGPNGFEYFAPANTDANNIEGQAILYQNEFLTLNGKKYYFGSDSKAVTGWRIINNKKYYFNPNNAIAAIHLCTINNDKYYFSYDGILQNGYITIERNNFYFDANNESKMVTGVFKGPNGFEYFAPANTHNNNIEGQAIVYQNKFLTLNGKKYYFDNDSKAVTGWQTIDGKKYYFNLNTAEAATGWQTIDGKKYYFNLNTAEAATGWQTIDGKKYYFNTNTFIASTGYTSINGKHFYFNTDGIMQIGVFKGPNGFEYFAPANTDANNIEGQAILYQNKFLTLNGKKYYFGSDSKAVTGLRTIDGKKYYFNTNTAVAVTGWQTINGKKYYFNTNTSIASTGYTIISGKHFYFNTDGIMQIGVFKGPDGFEYFAPANTDANNIEGQAIRYQNRFLYLHDNIYYFGNNSKAATGWVTIDGNRYYFEPNTAMGANGYKTIDNKNFYFRNGLPQIGVFKGSNGFEYFAPANTDANNIEGQAIRYQNRFLHLLGKIYYFGNNSKAVTGWQTINGKVYYFMPDTAMAAAGGLFEIDGVIYFFGVDGVKAPGIYG
>NZ_CP019870.1|WP_004454330.1|3273364_3274063_+|glycosylating-toxin-anti-sigma-factor-TcdC
MFSKKNEGNEFSNEGKGSSKKIIKFFKSTKGIALLAFILGVFFGNISSPACSEDHEEVISNQTSVIDSQKTEIETLNSKLSDAEPWFKMKDDEKKAIEAENQRKAEEAKKAEEAKKAEEQRKKEEEEKKGYDTGITYDQLARTPDDYKYKKVKFEGKVIQVIEDGDEVQIRLAVSGNYDKVVLCSYKKSITPSRVLEDDYITIRGISAGTITYESTMGGNITIPGIAVEKIN
>NZ_CP019870.1|WP_003440188.1|3297427_3298162_-|MBL-fold-metallo-hydrolase
MNLAKGLDVLKISSNVFGEDKVMYIPVIYTEDDATLIDTGLPGQGDLIIDALNKSNTSFDRLKNIIITHHDIDHIGNINYLREKSKNNIKVYAYKSEISYITGEETPFKLYMLEQMVDKIDDKMLSMLNVMGLGFKSSYTKVDVSLDNHEKLNLGEEIEVIHTGGHTRGHICLYLKESKVLIAGDLLQVENGELKPVDVMYSNKQELKDAIKNISNYDIETIVFSHGGLYQRNIIGTLKNLIIE
>NZ_CP019870.1|WP_003440185.1|3299167_3299806_-|ABC-2-transporter-permease
MLIHLVKKDILIVKKYVLLILFIAIGIPLFILWRLPPFAQILGFVLSIIFSEFMLCQYLLLKESQYSKASVLLCSTPYPRRGLVQSKYVLFAMVFIYCTLVYWIENLLIPQIGTFDLTYILIVLLISSIIYGVYMPIQYKLGYETTKFFFVVIIMASSFVLPLTIAHSNFEIPFIYQYPSMIVNIVLFLLSLIILLASMFISIKIFSNKELV
>NZ_CP019870.1|WP_003440183.1|3299808_3300666_-|ABC-transporter-ATP-binding-protein
MENILEVYNLNKTYTDFSLSNISFALPEDCITGFIGVNGAGKTTTIRSILDVVKRDSGKIKIFGKDFDGNEKELKNRIGVVFDDSYFYEELSMAEMKSIIAPSYDNWCEEDYQQNMKRFNLNPKQKIDTLSKGMKMKFALALALSHKAEFLIMDEPTSGLDPLIRSQILDILTEYMKKCGRGVFFSTHITSDLDKIADMIVMIDNGRIILEREKDTLLDEHRKVKGDIQFLNDETKKLFLNLEITGYGFIGITSKINEVQKNMPDILIERPTIEDIMLAYIERRE
>NZ_CP019870.1|WP_003440181.1|3300667_3301042_-|GntR-family-transcriptional-regulator
MKVLISNTSDKPLYQQIKEQIKEAIFTEELKEGDAMPSIRNFANDLKVSILTIRRVYEELENEGFLTRQVGIGTFISTGNLEILRDSKRRIVEQKMADMIKDAKALGITQIELQEMMDILYQED
>NZ_CP019870.1|WP_003440174.1|3302190_3303381_-|hypothetical-protein
MSDMLLWFSVVLVLFAIGDLIASKTKAKVSAVFVTLLLFLILFVTKAIPADIIEKAGMTAAASWSVPMIMFSMGTMLNVKQFIDEWRTVLTAWLGIVAVIVCVSLCIPLFGKSTVLTSIPVINGALPATTIMTQAALEKGLTLAAATATVVFAIQKFIGTPIASRAALQEANRLLVEYHEAKSKGIDLANVDTDKKEAENTGTKVKQAFCEKYDKYYSTNVCIFFIALFSYLGYELSEIIHVNYSIVCLVVGVIVTRIGIVPKDILEKGKIKGFINMVVFAAVIPSLAKVSLTDLISLFVPIVGMFAASIIGIFLMMKVLPGWKIIGSKPLAFGVGFCQMLGFPTTYLISNEVCNAVGETEEERAYLMSKIMPKLVVGGMACMISIVVAGLMVPML
>NZ_CP019870.1|WP_003440172.1|3303396_3305352_-|S9-family-peptidase
MEKIKIESSDIFEYIFPHDISCSPDGKHIAYIISNINEEKDCYEHDLYVMDIKTEKQIHMTQTKDVTSFSWISNTELLFTSKRNKPKSGTTDFYTISIEGGEAKKAFSIPKACSVPVSLGNKLWLLTTKNPTDSKKSEPDRAVEGVDYWTFTDKPFIRDGENFSQRRRVTLELYQEGENITKAITPKFCEVAGVDVSSDKNRILYTGQIYEDCATPFSGLWEYHIDSGETKELVPQGKYQISLAKYIGKDKVMLQASTLDRSITQNHDIFILDLSTNEINMIASPDGMYATLLDVDAVYGGGRSNKVIGDKFIGARICRTMTEFNEFDTKTGNIRIITKVDAFTSFDIYDNTMYTVMLKDYELAEIYSIDMTTGTMKKMTAFSKPYLDTHKVSLPEKLTFVAKNKEEVDGFVIPPIDAKEGEKYPAVLFIHGGPKWAYGYMFTHLKQCVTSKGMYVIYCNPHGGDGYGEKFLEMVERWGYVDYEHLMEFVDTCIEKYPGIDADRLGVAGGSYGGYMTNWIIGHTDRFKAAASQRGISNLITASLIIDFGDRIMKQTCGDKTPWNHEEVLWNHSPIKYVKNVKTPTLFLHSDRDYRCFMGDTFQMFTALKQLGVDTEMYLFHGDTHGLSRNGRPSNRIARANAIVDWFERYL
>NZ_CP019870.1|WP_003440170.1|3305368_3307435_-|S9-family-peptidase
MKEVVGSLKKITKERTENTMKKLFTSETFLEYQFISDCQISPDGGYTAFIVKKADIKENGYTSQVYILNNKTGELKQITSINSVGAYAWEDENTILFPALRNEKVKEAVKNGKQCMSYYALSLNGGEAEELFRLPIKGGKLNPIGKGLYAVIDSYDNDRPIVEGLPEEEQQKKINAYNKRHYEHFKEIPYAVNGEGYISRKRKRLYIYDSNINELKAITAPMFNVVGMKISDGKILYIGQEFKDVKGLKNGVYVFDTNTNTNVCILEKDKYIIKGFELYQNQVILNLTDALSYGNGENGDFYTIDIDTKEMKLLSGHQHHCIGNTVTSDVKMGAGQTTKVDGEYIYYTSTVDMDCIIERIHIPTGKQEKVTQTGSVDFIDVKDGNIVCVGCLGNGLPEVYTVENGTLCKKTHLNDHILEEYKISVPEYIESKGSSKWEIQGYVYKPVDYEVGKKYPAVLAIHGGPRLTYGPYFMHEIQVFTSAGYFVFFCNPRGSEGRGNAFADIRKQFGDIDYIDFMEFTDTVLEKYTDIDKTKLAVEGGSYGGFMTNWIIGHTNRFAVACAQRSIANWSGMEGTTDIGYYFCKGQTGASHMENHELQWKQSPLAYADKCVTPTLFLHGEKDYRCYMQEAFQMFSALKIHGCPTKLCLFEGENHELSRSGRPKQKLQRLVEMLDWFSVYIKKDNIGQ
>NZ_CP019870.1|WP_009892717.1|3307772_3308423_-|GntR-family-transcriptional-regulator
MKVKSNLDEILYHKIIESLIRGEYSVGQKILLNDLCEKFEVSRTPVVQAVKMLNKDGVLTIMTNGKVYVPEYEYDMVKQVCETRTLIETYALEKMMQEEEEVFQQKLDVIKRYSDKCEEYYRQEKSVELALADLELHKAIVEGANNEILNDVYVGIQGRFIVVNYLIRPLKNRNYEGTVQDHFEILKFIEDRDTKKAVDKLRNHIQGTIKRFCEDE
>NZ_CP019870.1|WP_003440161.1|3309839_3310520_-|ABC-transporter-permease
MIHLMKLELKKVGLKRYFLFSMLGIFLCMFFVFTGLNDKSTSIYDYDVTFRTISLFFCFYYIILFAVLNVAYIINEYTNKTILILFSYPLDRKKLILSKLLLITTLMISSMIVGYICCFTFVVVLDKYFNLVIGDFHISILSYWIPGAIKSIIIFCSLGIWTFVVGMIRKSIPVTLVSSIIFINLRQFILAGTNTTQDSLISVFIIVGITVIGIYYILNHKVTEID
>NZ_CP019870.1|WP_021368923.1|3310516_3311443_-|ABC-transporter-ATP-binding-protein
MNYIIETHQLKKIYKDKAVVNAVNIHVKKGEIYGFVGPNGAGKSTVMKMLLNLVKPNSGEIVMFSKKVEETDFEILKKIGTIIENPYLYENLTAKQNLDLHCEYMGYYNKEHISEVLECVGLSKQSNKKVSKYSLGMKQRLAIARAILTKPELLILDEPINALDPEGIREMRELFRKLNTDYGITIFISSHILSEVEQIADTIGIIQDGKLIKEISMSDIHKYQTDYVEVDVDNVELAGYLLEKEFGIKDFKITSESCIEIYDLRKDVKEISKIFIQNQIGINSIGRKQSSLEDYFFQTTGTGGKETL

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Crispr_ID: NZ_CP019870_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019870_17

4045262-4045346

Orphan

Consensus_repeat	Method
ATTCCGTTGCTTAAAGTGCTAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019870_17

>merge|NZ_CP019870|17|4045262-4045346|CRISPRCasFinder
ATTCCGTTGCTTAAAGTGCTAACGCACAGCGCCAACAAACAAACTTCACATGCGTTCAGTTTATTCTGTTGCTTAAAGTGCTAAC

>NZ_CP019870|17|16|4045262-4045346|CRISPRCasFinder
ATTCCGTTGCTTAAAGTGCTAAC	GCACAGCGCCAACAAACAAACTTCACATGCGTTCAGTTT
ATTCTGTTGCTTAAAGTGCTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019870.1\|WP_003421624.1\|4037943_4038399_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
NZ_CP019870.1\|WP_003435567.1\|4033176_4034382_+\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|340861
NZ_CP019870.1\|WP_003421622.1\|4035835_4037473_-\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|235505
NZ_CP019870.1\|WP_003420471.1\|4054270_4054567_-\|YtxH-domain-containing-protein	unknown	unknown	gnl\|CDD\|378938
NZ_CP019870.1\|WP_003435561.1\|4041342_4041852_-\|transcription-repressor-NadR	unknown	unknown	gnl\|CDD\|224740
NZ_CP019870.1\|WP_003429308.1\|4053270_4053657_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|235217
NZ_CP019870.1\|WP_009887752.1\|4035426_4035777_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
NZ_CP019870.1\|WP_003429305.1\|4054635_4057062_-\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP019870.1\|WP_003434229.1\|4057081_4058983_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	unknown	unknown	gnl\|CDD\|235542
NZ_CP019870.1\|WP_003429303.1\|4058983_4060099_-\|DNA-replication/repair-protein-RecF	unknown	unknown	gnl\|CDD\|234608
NZ_CP019870.1\|WP_003435562.1\|4038719_4039991_-\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP019870.1\|WP_003421616.1\|4034452_4034674_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_004453983.1\|4023406_4023820_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003429306.1\|4053681_4053999_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NZ_CP019870.1\|WP_003420479.1\|4060116_4060323_-\|S4-domain-containing-protein-YaaA	unknown	unknown	gnl\|CDD\|379097
NZ_CP019870.1\|WP_003426056.1\|4040449_4041331_-\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|182386
NZ_CP019870.1\|WP_003421618.1\|4034814_4035414_-\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NZ_CP019870.1\|WP_003420464.1\|4052497_4053271_-\|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274373
NZ_CP019870.1\|WP_003420469.1\|4054010_4054271_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019870.1\|WP_003420481.1\|4060459_4061566_-\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|235541

Protein	Function_ID	Function_description	E-value
NZ_CP019870.1\|WP_003421624.1\|4037943_4038399_-\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	7.52683e-52
NZ_CP019870.1\|WP_003435567.1\|4033176_4034382_+\|glycosyl-transferase	gnl\|CDD\|340861	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins. beta-diglucosyldiacylglycerol synthase (processive diacylglycerol beta-glucosyltransferase EC 2.4.1.315) is involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. This family of glycosyltransferases also contains plant major galactolipid synthase (chloroplastic monogalactosyldiacylglycerol synthase 1 EC 2.4.1.46). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	6.36742e-148
NZ_CP019870.1\|WP_003420471.1\|4054270_4054567_-\|YtxH-domain-containing-protein	gnl\|CDD\|378938	pfam12732, YtxH, YtxH-like protein. This family of proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved. Proteins is this family are functionally uncharacterized.	3.51616e-13
NZ_CP019870.1\|WP_003435561.1\|4041342_4041852_-\|transcription-repressor-NadR	gnl\|CDD\|224740	COG1827, COG1827, Predicted small molecule binding protein (contains 3H domain) [General function prediction only].	9.01143e-44
NZ_CP019870.1\|WP_003429308.1\|4053270_4053657_-\|ATP-binding-protein	gnl\|CDD\|235217	PRK04069, PRK04069, serine-protein kinase RsbW; Provisional.	1.741e-43
NZ_CP019870.1\|WP_003429306.1\|4053681_4053999_-\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	1.08798e-25
NZ_CP019870.1\|WP_003429305.1\|4054635_4057062_-\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP019870.1\|WP_009887752.1\|4035426_4035777_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	1.04649e-45
NZ_CP019870.1\|WP_003434229.1\|4057081_4058983_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	gnl\|CDD\|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	0
NZ_CP019870.1\|WP_003429303.1\|4058983_4060099_-\|DNA-replication/repair-protein-RecF	gnl\|CDD\|234608	PRK00064, recF, recombination protein F; Reviewed.	1.43571e-130
NZ_CP019870.1\|WP_003435562.1\|4038719_4039991_-\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP019870.1\|WP_003421622.1\|4035835_4037473_-\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|235505	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated.	0
NZ_CP019870.1\|WP_003420479.1\|4060116_4060323_-\|S4-domain-containing-protein-YaaA	gnl\|CDD\|379097	pfam13275, S4_2, S4 domain. The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4.	5.13778e-28
NZ_CP019870.1\|WP_003426056.1\|4040449_4041331_-\|mechanosensitive-ion-channel	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	1.72542e-62
NZ_CP019870.1\|WP_003421618.1\|4034814_4035414_-\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	6.04881e-129
NZ_CP019870.1\|WP_003420464.1\|4052497_4053271_-\|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274373	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily. This group of similar sigma-70 factors includes clades found in Bacilli (including the sporulation factors SigF:TIGR02885 and SigG:TIGR02850 as well as SigB:TIGR02941), and the high GC gram positive bacteria (Actinobacteria) where a variable number of them are found depending on the lineage.	6.4918e-87
NZ_CP019870.1\|WP_003420481.1\|4060459_4061566_-\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|235541	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated.	1.36085e-135

>NZ_CP019870.1|WP_003435561.1|4041342_4041852_-|transcription-repressor-NadR
MNSNERRSKLIDILKESKHPVKGGTLAELLNVSRQVIVQDIALIRARGFEIIATPQGYIIYNQPYFTKQIKCKNHKDSKEIYDELKIIVDLGGIIKDVIVNHPTYGQITAELNIYSKMDIDNFMKKVETNEFKQLSVLTECSHIHTIEAIKEETIEAIVKELKDNGILS
>NZ_CP019870.1|WP_003426056.1|4040449_4041331_-|mechanosensitive-ion-channel
MNFLSLAKTASTNSNITKRTLENMLDNFSDNIPNIIYAIIVFVIGIYISKIVRRMVSKFLIKYGMSKGVNNFIVYGIYISMLSIISLISLGIIGIQTTSVVAVLGAAGFSIGLAFKEILSNLGSGMIILFFKPFNIGDYIQGSGVEGTVSDIQIFSTVLKTPDNKTIIIPNFQLTSNNIINYTHQNKRRIDFSYNISYDSDIDVVKSILNEIFTNEKRILNDPKPIIGLNSIGNNTMQIVARPWVKTDDYWDVYFDVMEKVKNKFDENDIKVPFVPSSLLFNNTGNLNTMDKR
>NZ_CP019870.1|WP_003435562.1|4038719_4039991_-|serine--tRNA-ligase
MLDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQEVEVMKNELNVNSKKIPQLIKEGKDVTEEKARLKELSDKIKGIDEKVKEVEAKMEYTLMRIPNVPHPEVPQGETDEDNVQIRTWGEPTKFDFEHKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGARLERSLMNFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPKFEEDMFKIEGLEYFLIPTAEVPVTNIHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVKPEDSYNELESLTHDAETMLQMLGLPYRVVKICTGDLGFTAAFKYDLEVWMPSYNRYVEISSCSNFEDFQARRAGIRFKRDKKSKAEYVHTLNGSGLAIGRCLAAILENYQQADGSVVVPEELRPYMGVDVIK
>NZ_CP019870.1|WP_003421624.1|4037943_4038399_-|nucleoside-deaminase
MESSFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTETLKDSTAHAEILAIKQASEKLGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTRHVKNSYIEKQHEFKLDYFNNNNVKVAFDVLQEECSIILQEFFKALRKRD
>NZ_CP019870.1|WP_003421622.1|4035835_4037473_-|DNA-polymerase-III-subunit-gamma/tau
MHKALYRAYRPQKFEDVIGQDHIIKTLKNQIYSDNIGHAYLFCGTRGTGKTSTAKIFSRAVNCLNKINEEPCNECEICESVLKDNTMDVVEIDAASNNSVDDIRELRESVKYSPANAKYKVYIIDEVHMLSQGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRYDFKRVTVKDMTLRMKKICEDEGIDIDDKALNLIARNSQGALRDALSILDQCMSFGESKIDYKDVVELMGSVNIEQLFELSQCIVEQDTKKSLEILNEFVLWGKDIRNLINDLIDHFRNLMVCKVSSELDEIISLPEETIEQLKIQSKNIDINDLIRILNILSITQDDIKSSSNPRVLVEITIMKIAQPMFDESKEALIKRVENLEKMIELGNFKSEKIGNNKEKEYEVDREIDVKQENVVYEDVKNEDVILIESSWKNILKQIKKDKKMPIYALLSEVKSFNVYSNMLYVIFDDKFDFAKTRLSSQDTINYLEKTIRDVLNRSFNVKIVLTSEVKDINLEVKEKKDIGEEILKNIVSEEILEIKDSIDENESK
>NZ_CP019870.1|WP_009887752.1|4035426_4035777_-|YbaB/EbfC-family-nucleoid-associated-protein
MAKKGFGGGMMPGGGNMNNLLKQAQKMQENMQKAQQELESKEVEASVGGGAVTVKVNGKKEVIDITIKPEVVDPDDIEMLQDLVLSAVNQALRNIDDIQASQMSKVTGGMNIPGLF
>NZ_CP019870.1|WP_003421618.1|4034814_4035414_-|recombination-protein-RecR
MQVYTGPITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEALSKAIIDAKREIRYCSICCNITDTDPCSMCSNKSRDSSVICVVEDPRDVAAMERTREFKGQYHVLNGVISPMDGIGPDMLKIKELIQRLGNQEVKEIIMATNPTIEGEATAMYIARLVKPMGIKVTRIAHGLPVGGDLEYADEVTISKALEGRREI
>NZ_CP019870.1|WP_003421616.1|4034452_4034674_-|hypothetical-protein
MKPIMNLEEHNAMKEKRVKKMKSKDKPKYDDFEDISFSNKKKTKKNVRNKNAEFRNNYKNYQYDYEEDFYEPI
>NZ_CP019870.1|WP_003435567.1|4033176_4034382_+|glycosyl-transferase
MSKKVLIMSASTGGGHNRAALAIKEELTSKTLDGEPIECEIIDSLKLVNNTMDKIISRGYEKSAIYTPKAYGSVYRLSETNLLSKNEFKDNLLITFMAKKFKKLIRSEKPDLIIGTHPFPMIALSTLKKNFNLHNNESNAYTEHFYKHYTNTINVPPLISVLTDYTTHSTWIQNEIDYYIVGHEYVKELLVFDGVEPSKIRTFGIPVEKSFLSHRDKGIVLSELNLSPDKLTVLLMGGSFGAGNIKETLDELLDTDRDFQILVITGKNESLKEKIEKKLMSRYHDKNVCVLGYTDKMNDILASIDVLVSKPGGLTTTEALLKDVPMIVPYYIPGQEEENLDFLSNCGAALRTTKKYNLSILLKVLIDDPSRLEMLKRNIKSIRKSNSAQNIANLILNIISG
>NZ_CP019870.1|WP_004453983.1|4023406_4023820_-|hypothetical-protein
MYIVIGNEIVDSEELKIIIDKNSEFKVEKDLSKSTKREDVIAYQLSIDLNYLDSLINEQCNLASLSDEEKFDEYMTLSDELALDLEELMPKYTIINARAYKLDEVDGIVKIILAVAYADLGHLKLSDVVKRLSRQVD
>NZ_CP019870.1|WP_003420464.1|4052497_4053271_-|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor
MKNVANATHYLNMDTKELFNLYNKNKNVDIRNILIERHLYLARLLAKKYINKGVDFEDIYQVASLALIYAIDRYDVEKGFEFSSFATPTIVGEIKKYFRDKVWTLRVPRRIQELSKKISDAKIKLEQENKKHPKVKDIADYIGVSEEDVLEAMEASYGYQPMSLDSSSNDDSEDKDITLIDKIGKEEGNFGSIEYEDFINKFIETLNELEVKIFKDRFFFDKTQSSIAKELGISQMTVSRLEKKVVEKLKKEYEKNL
>NZ_CP019870.1|WP_003429308.1|4053270_4053657_-|ATP-binding-protein
MEITTNPDYVSIIRLTASGIANKMGFPIDDIEDIKVAVSEACTNAIKHSKDDVFNIVFNILDNAINIEIQDNGKGYDVSSISTPDLENPKESGLGLFIIKTLMDDVDIESEHNQGTKIKMTKYLGVDI
>NZ_CP019870.1|WP_003429306.1|4053681_4053999_-|STAS-domain-containing-protein
MSMNIDSNLDSQNKFWNVCLDGELDVSTADKLKEHLHALIEKNMLDVKINLKDLDYIDSTGLGAMIGVLKKLKINEKEIYIVNPKSNVRKIFTITGLDKIFKVEG
>NZ_CP019870.1|WP_003420469.1|4054010_4054271_-|hypothetical-protein
MNAWGWQIGAVLVGSSALIVAIYLAKTLNSINKVVEKAYKIVDYNERHIQDIVENASSISKGIDDIVYVINKILSIGNIFKIIKRK
>NZ_CP019870.1|WP_003420471.1|4054270_4054567_-|YtxH-domain-containing-protein
MCNKRSCKKGGFLLLGAILGFIFGMFFAPKKGSELRKETKEKFNDVKENPKEVLHETFNDVKERIINLVDDDNNEEDIKISEEDIVISKSFDDEGDVN
>NZ_CP019870.1|WP_003429305.1|4054635_4057062_-|DNA-gyrase-subunit-A
MEENNKILPIEIAEEMKKSYIDYSMSVIAGRALPDVRDGLKPVHRRILYSMSELNLTPDKPYRKSARIVGDVLGKYHPHGDTAVYYAMVRMAQDFSTRALLVDGHGNFGSVDGDSPAAMRYTEAKMSKLSLELLRDIEKETVDFKPNFDESLKEPSVLPARYPNLLVNGSNGIAVGMATSIPPHNLAEVIDATVYLIDNPECSVDDLIKFVQGPDFPTAAIIMGKESIAEAYRTGRGKVKVRSRAFIEELPKGKQQIIVTEIPYQVNKAKLVERIAELVKEKRIEGISDLRDESNRNGMRIVIELKRDANANIVLNNLYKHSQMEDTFSIIMLALVDGQPRVLNLKQILYHYIKHQEDVVTRRTKFELNKAEARAHILEGLKIALDNIDAVISLIRASKTGQEAKLGLIEKFKLTEIQAQAILDMRLQRLTGLERDKIEAEYEDLIKKINRLKEILADERLLLNVIKDEITIIKENYSDERRTEIRHAEGEIDMRDLISDEEIAITLTHFGYIKRLPSDTYKSQKRGGRGISALTTREEDFVRHLVTTTTHSRLLFFTNKGRVFKLNAYEIPEGKRQAKGTAIVNLLQLSADEKIATLIPIDGNDENEYLLLATKKGIVKKTKREEFKNINKSGLIAIGLRDDDELIGVELTDGKQEVLLVTKEGMSIRFDENDIRYMGRTAMGVKGITLSKEDFVVSMNLCSKGTDVLVVSKNGFGKRTNIEEYRSQIRAGKGIKTYNISEKTGTIVGADMVNEDDEIMIINSDGVLIRIRVNEISLFGRVTSGVKLMKTNDEVNVVSIAKINIEEE
>NZ_CP019870.1|WP_003434229.1|4057081_4058983_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B
MKQEYGASQIQVLEGLEAVRKRPGMYIGSTSPRGLHHLVYEVVDNSIDEALQGYCSDIYVSINEDGSVLVKDNGRGIPVEIHPKTGKSTLETVLTNLHAGGKFGGGGYKVSGGLHGVGVSVVNALSKWMVAEVYLNGKIYKQTYEKGLPTSKLEVVGESQDKGTMIQFMPDETIFDEIEFKYETLEYRLRELSFLNKGIKIVFEDKREGQEKRKEFHYTGGLVEYIKYLNKSRTGIHDDIVYIDKKVDDCFVELAMQYTDGYTENIYSFANNINTHEGGSHLSGFKAALTKTVNDYAKRNKFLKENDVNLLGEDIREGLTAVVSVKLPEPQFEGQTKTKLGNSFMRGIVDSVTVDELGSFLEENPSTARIIVDKALRAQRAREAAKKARELTRRKSVLESTSLPGKLADCAEKDPSKSEIFLVEGDSAGGSAKQGRDRNSQAILPLRGKILNVEKSRLDRILSSDEIKNMITAYGCGIGEDFDIDKARYHKIIIMTDADVDGAHIRTLLLTFFFRYMRPLIDEGYVYAAQPPLYKVTKQKKEHYVYSDKELNILLDEIGRNGVELQRYKGLGEMNAEQLWETTMNPETRTLLQVTVEDAAIADEVFSMLMGDKVAPRKEFIEENARFVRNLDI
>NZ_CP019870.1|WP_003429303.1|4058983_4060099_-|DNA-replication/repair-protein-RecF
MKLKSLQLVNFRNYKKLHLEFNGKVNLLVGKNGQGKTNIVESIYMLSFGKSFRTNKDKEMVRFNSENLYIGGSFSKYNKYSLIELIIGKDKKGIRINKVPLQKIQELLGNLNVVIFSPEDLRLVKEGPKERRAFIDKEISQIIPKYYKYLTNYNKTLSQRSRVLKNIHVDEALLDVYDDTLAKYGSYIYILRRDFIKKIANISENMHMNLTNGVERLSIRYKNQINITDEDTIDTVYNKFLAKLSSNRPNDIESKTTRYGIHKDDLNIFINDLDARLFGSQGQQRTASISLKLSEIELIKNEVEEYPVLILDDVFSELDEARQKLLVNNLSNVQMFITSAEVSHKKIFDEKNVTIFNIENGDVISIENGGN
>NZ_CP019870.1|WP_003420479.1|4060116_4060323_-|S4-domain-containing-protein-YaaA
MTEITIESEYIKLDQFLKLAEIASTGGHAKFLIQEGLVTVNDEIELRRGKKIKSGDIVEIEGTKIKVL
>NZ_CP019870.1|WP_003420481.1|4060459_4061566_-|DNA-polymerase-III-subunit-beta
MKIICNQKILANRIGIAQKAINGKTTIELLKGILISTEEGQLKLTGYDAEIGIETYVQAEIIEKGDVVVDARLFGDIIRKLPDSFVEIETDSENNIYINCVNSRFKIKGYAAKEFPKLPELNEEDLYSIPQEILKNMIKQTVFAISQDQTKPVLMGELLEIVDRNLNLVAIDGYRLAVKSCSVDSLTENIKVIIPGKTLIDVNSLLSGEDNVKVGFNEKNAIFIINDTKIITRLLEGDFIDYKKLLPREHNSRVKLNTKELLNSIERASLLSQSEKNNLIKLSIRDKVMAITSNTEKGNVYEEVEIDLDGDYLDIAFNSRYFIEGLKNIDNEEIFIEFTTNVNPCIIKPTDDVNYIYLLLPVRISSNI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP019870_1	1.28\|288565\|18\|NZ_CP019870\|CRT	288565-288582	18	NZ_CP019870.1	3642711-3642728	0	1.0
NZ_CP019870_17	17.1\|4045285\|39\|NZ_CP019870\|CRISPRCasFinder	4045285-4045323	39	NZ_CP019870.1	223135-223173	0	1.0
NZ_CP019870_17	17.1\|4045285\|39\|NZ_CP019870\|CRISPRCasFinder	4045285-4045323	39	NZ_CP019870.1	1009469-1009507	0	1.0
NZ_CP019870_17	17.1\|4045285\|39\|NZ_CP019870\|CRISPRCasFinder	4045285-4045323	39	NZ_CP019870.1	2916369-2916407	0	1.0
NZ_CP019870_17	17.1\|4045285\|39\|NZ_CP019870\|CRISPRCasFinder	4045285-4045323	39	NZ_CP019870.1	3909016-3909054	0	1.0
NZ_CP019870_17	17.1\|4045285\|39\|NZ_CP019870\|CRISPRCasFinder	4045285-4045323	39	NZ_CP019870.1	3925039-3925077	0	1.0
NZ_CP019870_17	17.1\|4045285\|39\|NZ_CP019870\|CRISPRCasFinder	4045285-4045323	39	NZ_CP019870.1	3931989-3932027	0	1.0
NZ_CP019870_17	17.1\|4045285\|39\|NZ_CP019870\|CRISPRCasFinder	4045285-4045323	39	NZ_CP019870.1	4031054-4031092	0	1.0
NZ_CP019870_17	17.1\|4045285\|39\|NZ_CP019870\|CRISPRCasFinder	4045285-4045323	39	NZ_CP019870.1	4050696-4050734	0	1.0
NZ_CP019870_1	1.6\|287512\|18\|NZ_CP019870\|CRT	287512-287529	18	NZ_CP019870.1	405415-405432	1	0.944
NZ_CP019870_1	1.6\|287512\|18\|NZ_CP019870\|CRT	287512-287529	18	NZ_CP019870.1	405793-405810	1	0.944
NZ_CP019870_1	1.22\|288259\|18\|NZ_CP019870\|CRT	288259-288276	18	NZ_CP019870.1	3642180-3642197	1	0.944
NZ_CP019870_1	1.28\|288565\|18\|NZ_CP019870\|CRT	288565-288582	18	NZ_CP019870.1	406135-406152	1	0.944
NZ_CP019870_1	1.28\|288565\|18\|NZ_CP019870\|CRT	288565-288582	18	NZ_CP019870.1	406234-406251	1	0.944
NZ_CP019870_1	1.28\|288565\|18\|NZ_CP019870\|CRT	288565-288582	18	NZ_CP019870.1	3642144-3642161	1	0.944
NZ_CP019870_1	1.28\|288565\|18\|NZ_CP019870\|CRT	288565-288582	18	NZ_CP019870.1	3642171-3642188	1	0.944
NZ_CP019870_1	1.28\|288565\|18\|NZ_CP019870\|CRT	288565-288582	18	NZ_CP019870.1	3642405-3642422	1	0.944
NZ_CP019870_1	1.28\|288565\|18\|NZ_CP019870\|CRT	288565-288582	18	NZ_CP019870.1	3642612-3642629	1	0.944
NZ_CP019870_1	1.28\|288565\|18\|NZ_CP019870\|CRT	288565-288582	18	NZ_CP019870.1	3642675-3642692	1	0.944
NZ_CP019870_17	17.1\|4045285\|39\|NZ_CP019870\|CRISPRCasFinder	4045285-4045323	39	NZ_CP019870.1	84416-84454	1	0.974
NZ_CP019870_1	1.21\|288214\|27\|NZ_CP019870\|CRT	288214-288240	27	NZ_CP019870.1	406126-406152	2	0.926
NZ_CP019870_17	17.1\|4045285\|39\|NZ_CP019870\|CRISPRCasFinder	4045285-4045323	39	NZ_CP019870.1	3914428-3914466	2	0.949

1. spacer 1.28|288565|18|NZ_CP019870|CRT matches to position: 3642711-3642728, mismatch: 0, identity: 1.0

ccaacaggagcaacagga	CRISPR spacer
ccaacaggagcaacagga	Protospacer
******************

2. spacer 17.1|4045285|39|NZ_CP019870|CRISPRCasFinder matches to position: 223135-223173, mismatch: 0, identity: 1.0

gcacagcgccaacaaacaaacttcacatgcgttcagttt	CRISPR spacer
gcacagcgccaacaaacaaacttcacatgcgttcagttt	Protospacer
***************************************

3. spacer 17.1|4045285|39|NZ_CP019870|CRISPRCasFinder matches to position: 1009469-1009507, mismatch: 0, identity: 1.0

gcacagcgccaacaaacaaacttcacatgcgttcagttt	CRISPR spacer
gcacagcgccaacaaacaaacttcacatgcgttcagttt	Protospacer
***************************************

4. spacer 17.1|4045285|39|NZ_CP019870|CRISPRCasFinder matches to position: 2916369-2916407, mismatch: 0, identity: 1.0

gcacagcgccaacaaacaaacttcacatgcgttcagttt	CRISPR spacer
gcacagcgccaacaaacaaacttcacatgcgttcagttt	Protospacer
***************************************

5. spacer 17.1|4045285|39|NZ_CP019870|CRISPRCasFinder matches to position: 3909016-3909054, mismatch: 0, identity: 1.0

gcacagcgccaacaaacaaacttcacatgcgttcagttt	CRISPR spacer
gcacagcgccaacaaacaaacttcacatgcgttcagttt	Protospacer
***************************************

6. spacer 17.1|4045285|39|NZ_CP019870|CRISPRCasFinder matches to position: 3925039-3925077, mismatch: 0, identity: 1.0

gcacagcgccaacaaacaaacttcacatgcgttcagttt	CRISPR spacer
gcacagcgccaacaaacaaacttcacatgcgttcagttt	Protospacer
***************************************

7. spacer 17.1|4045285|39|NZ_CP019870|CRISPRCasFinder matches to position: 3931989-3932027, mismatch: 0, identity: 1.0

gcacagcgccaacaaacaaacttcacatgcgttcagttt	CRISPR spacer
gcacagcgccaacaaacaaacttcacatgcgttcagttt	Protospacer
***************************************

8. spacer 17.1|4045285|39|NZ_CP019870|CRISPRCasFinder matches to position: 4031054-4031092, mismatch: 0, identity: 1.0

gcacagcgccaacaaacaaacttcacatgcgttcagttt	CRISPR spacer
gcacagcgccaacaaacaaacttcacatgcgttcagttt	Protospacer
***************************************

9. spacer 17.1|4045285|39|NZ_CP019870|CRISPRCasFinder matches to position: 4050696-4050734, mismatch: 0, identity: 1.0

gcacagcgccaacaaacaaacttcacatgcgttcagttt	CRISPR spacer
gcacagcgccaacaaacaaacttcacatgcgttcagttt	Protospacer
***************************************

10. spacer 1.6|287512|18|NZ_CP019870|CRT matches to position: 405415-405432, mismatch: 1, identity: 0.944

gcagatggaataacaggt	CRISPR spacer
gcaaatggaataacaggt	Protospacer
***.**************

11. spacer 1.6|287512|18|NZ_CP019870|CRT matches to position: 405793-405810, mismatch: 1, identity: 0.944

gcagatggaataacaggt	CRISPR spacer
gcaaatggaataacaggt	Protospacer
***.**************

12. spacer 1.22|288259|18|NZ_CP019870|CRT matches to position: 3642180-3642197, mismatch: 1, identity: 0.944

gtagcaggtccaacagga	CRISPR spacer
gtaacaggtccaacagga	Protospacer
***.**************

13. spacer 1.28|288565|18|NZ_CP019870|CRT matches to position: 406135-406152, mismatch: 1, identity: 0.944

ccaacaggagcaacagga	CRISPR spacer
ccaacaggagcgacagga	Protospacer
***********.******

14. spacer 1.28|288565|18|NZ_CP019870|CRT matches to position: 406234-406251, mismatch: 1, identity: 0.944

ccaacaggagcaacagga	CRISPR spacer
ccaacaggagcgacagga	Protospacer
***********.******

15. spacer 1.28|288565|18|NZ_CP019870|CRT matches to position: 3642144-3642161, mismatch: 1, identity: 0.944

ccaacaggagcaacagga	CRISPR spacer
ccaacgggagcaacagga	Protospacer
*****.************

16. spacer 1.28|288565|18|NZ_CP019870|CRT matches to position: 3642171-3642188, mismatch: 1, identity: 0.944

ccaacaggagcaacagga	CRISPR spacer
ccaacaggagcgacagga	Protospacer
***********.******

17. spacer 1.28|288565|18|NZ_CP019870|CRT matches to position: 3642405-3642422, mismatch: 1, identity: 0.944

ccaacaggagcaacagga	CRISPR spacer
ccaacaggagcgacagga	Protospacer
***********.******

18. spacer 1.28|288565|18|NZ_CP019870|CRT matches to position: 3642612-3642629, mismatch: 1, identity: 0.944

ccaacaggagcaacagga	CRISPR spacer
ccaacaggagcgacagga	Protospacer
***********.******

19. spacer 1.28|288565|18|NZ_CP019870|CRT matches to position: 3642675-3642692, mismatch: 1, identity: 0.944

ccaacaggagcaacagga	CRISPR spacer
ccaacgggagcaacagga	Protospacer
*****.************

20. spacer 17.1|4045285|39|NZ_CP019870|CRISPRCasFinder matches to position: 84416-84454, mismatch: 1, identity: 0.974

gcacagcgccaacaaacaaacttcacatgcgttcagttt	CRISPR spacer
gcacagcgccaacaaacaaacttcacatgtgttcagttt	Protospacer
*****************************.*********

21. spacer 1.21|288214|27|NZ_CP019870|CRT matches to position: 406126-406152, mismatch: 2, identity: 0.926

ttagtaggtccaacaggagcgacggga	CRISPR spacer
ttggtaggtccaacaggagcgacagga	Protospacer
**.********************.***

22. spacer 17.1|4045285|39|NZ_CP019870|CRISPRCasFinder matches to position: 3914428-3914466, mismatch: 2, identity: 0.949

gcacagcgccaacaaacaaacttcacatgcgttcagttt	CRISPR spacer
gcacaatgccaacaaacaaacttcacatgcgttcagttt	Protospacer
*****..********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019870_2	2.8\|752590\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752590-752625	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	130517-130552	0	1.0
NZ_CP019870_2	2.8\|752590\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752590-752625	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	122774-122809	0	1.0
NZ_CP019870_2	2.8\|752590\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752590-752625	36	LN681537	Clostridium phage phiCD211, complete genome	310-345	0	1.0
NZ_CP019870_2	2.8\|752590\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752590-752625	36	LN681537	Clostridium phage phiCD211, complete genome	131636-131671	0	1.0
NZ_CP019870_2	2.9\|752655\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752655-752691	37	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	6025-6061	0	1.0
NZ_CP019870_2	2.9\|752655\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752655-752691	37	MF547662	Clostridioides phage LIBA6276, complete genome	118353-118389	0	1.0
NZ_CP019870_2	2.9\|752655\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752655-752691	37	MF547663	Clostridioides phage LIBA2945, complete genome	117134-117170	0	1.0
NZ_CP019870_2	2.9\|752655\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752655-752691	37	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	115939-115975	0	1.0
NZ_CP019870_2	2.9\|752655\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752655-752691	37	LN681537	Clostridium phage phiCD211, complete genome	124801-124837	0	1.0
NZ_CP019870_2	2.16\|753113\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753113-753149	37	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	79641-79677	0	1.0
NZ_CP019870_2	2.16\|753113\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753113-753149	37	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	42323-42359	0	1.0
NZ_CP019870_2	2.16\|753113\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753113-753149	37	LN681537	Clostridium phage phiCD211, complete genome	51185-51221	0	1.0
NZ_CP019870_2	2.20\|753376\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753376-753411	36	NC_028958	Clostridium phage phiCD146, complete genome	15662-15697	0	1.0
NZ_CP019870_2	2.21\|753441\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753441-753476	36	NC_028838	Clostridium phage phiCD506, complete genome	20023-20058	0	1.0
NZ_CP019870_9	9.2\|1257276\|36\|NZ_CP019870\|PILER-CR,CRT	1257276-1257311	36	MF547662	Clostridioides phage LIBA6276, complete genome	123093-123128	0	1.0
NZ_CP019870_9	9.2\|1257276\|36\|NZ_CP019870\|PILER-CR,CRT	1257276-1257311	36	MF547663	Clostridioides phage LIBA2945, complete genome	121356-121391	0	1.0
NZ_CP019870_9	9.5\|1257474\|36\|NZ_CP019870\|PILER-CR,CRT	1257474-1257509	36	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	49156-49191	0	1.0
NZ_CP019870_9	9.5\|1257474\|36\|NZ_CP019870\|PILER-CR,CRT	1257474-1257509	36	NC_007917	Clostridium phage phi CD119, complete genome	49156-49191	0	1.0
NZ_CP019870_9	9.5\|1257474\|36\|NZ_CP019870\|PILER-CR,CRT	1257474-1257509	36	NC_028996	Clostridium phage phiCDHM19, complete genome	50361-50396	0	1.0
NZ_CP019870_9	9.10\|1257275\|37\|NZ_CP019870\|CRISPRCasFinder	1257275-1257311	37	MF547662	Clostridioides phage LIBA6276, complete genome	123092-123128	0	1.0
NZ_CP019870_9	9.10\|1257275\|37\|NZ_CP019870\|CRISPRCasFinder	1257275-1257311	37	MF547663	Clostridioides phage LIBA2945, complete genome	121355-121391	0	1.0
NZ_CP019870_9	9.13\|1257473\|37\|NZ_CP019870\|CRISPRCasFinder	1257473-1257509	37	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	49155-49191	0	1.0
NZ_CP019870_9	9.13\|1257473\|37\|NZ_CP019870\|CRISPRCasFinder	1257473-1257509	37	NC_007917	Clostridium phage phi CD119, complete genome	49155-49191	0	1.0
NZ_CP019870_9	9.13\|1257473\|37\|NZ_CP019870\|CRISPRCasFinder	1257473-1257509	37	NC_028996	Clostridium phage phiCDHM19, complete genome	50360-50396	0	1.0
NZ_CP019870_11	11.3\|1851161\|34\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1851161-1851194	34	NZ_MG019959	Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence	1797-1830	0	1.0
NZ_CP019870_11	11.3\|1851161\|34\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1851161-1851194	34	NZ_MG019961	Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence	1801-1834	0	1.0
NZ_CP019870_11	11.3\|1851161\|34\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1851161-1851194	34	NZ_MG019962	Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence	1797-1830	0	1.0
NZ_CP019870_11	11.3\|1851161\|34\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1851161-1851194	34	NZ_MG019960	Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence	1797-1830	0	1.0
NZ_CP019870_11	11.4\|1851224\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1851224-1851260	37	KU057941	Clostridium phage CDSH1, complete genome	30793-30829	0	1.0
NZ_CP019870_11	11.4\|1851224\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1851224-1851260	37	GU949551	Clostridium phage phiCD6356, complete genome	26072-26108	0	1.0
NZ_CP019870_11	11.4\|1851224\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1851224-1851260	37	JX145342	Clostridium phage phiMMP04, complete genome	21840-21876	0	1.0
NZ_CP019870_11	11.4\|1851224\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1851224-1851260	37	NC_028905	Clostridium phage phiCD111, complete genome	30587-30623	0	1.0
NZ_CP019870_11	11.4\|1851224\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1851224-1851260	37	HM568888	Clostridium phage phiCD38-2, complete genome	30285-30321	0	1.0
NZ_CP019870_11	11.4\|1851224\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1851224-1851260	37	LN881738	Escherichia phage slur17, complete genome	31227-31263	0	1.0
NZ_CP019870_12	12.7\|2226766\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2226766-2226802	37	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	19807-19843	0	1.0
NZ_CP019870_12	12.12\|2227095\|38\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2227095-2227132	38	JX145341	Clostridium phage phiMMP02, complete genome	11788-11825	0	1.0
NZ_CP019870_12	12.16\|2227359\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2227359-2227395	37	MF547662	Clostridioides phage LIBA6276, complete genome	118034-118070	0	1.0
NZ_CP019870_12	12.16\|2227359\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2227359-2227395	37	MF547663	Clostridioides phage LIBA2945, complete genome	116815-116851	0	1.0
NZ_CP019870_12	12.16\|2227359\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2227359-2227395	37	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	115620-115656	0	1.0
NZ_CP019870_12	12.16\|2227359\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2227359-2227395	37	LN681537	Clostridium phage phiCD211, complete genome	124482-124518	0	1.0
NZ_CP019870_12	12.16\|2227359\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2227359-2227395	37	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	6344-6380	0	1.0
NZ_CP019870_12	12.18\|2227491\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2227491-2227527	37	GU949551	Clostridium phage phiCD6356, complete genome	20000-20036	0	1.0
NZ_CP019870_13	13.17\|2403983\|38\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403983-2404020	38	KU057941	Clostridium phage CDSH1, complete genome	16403-16440	0	1.0
NZ_CP019870_13	13.17\|2403983\|38\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403983-2404020	38	LN881738	Escherichia phage slur17, complete genome	3997-4034	0	1.0
NZ_CP019870_13	13.17\|2403983\|38\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403983-2404020	38	HM568888	Clostridium phage phiCD38-2, complete genome	15899-15936	0	1.0
NZ_CP019870_15	15.4\|2723010\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2723010-2723046	37	MN718463	Clostridium phage phiCDKH01, complete genome	44520-44556	0	1.0
NZ_CP019870_15	15.5\|2723076\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2723076-2723112	37	LN881738	Escherichia phage slur17, complete genome	40071-40107	0	1.0
NZ_CP019870_15	15.5\|2723076\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2723076-2723112	37	KU057941	Clostridium phage CDSH1, complete genome	21949-21985	0	1.0
NZ_CP019870_15	15.5\|2723076\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2723076-2723112	37	NC_028905	Clostridium phage phiCD111, complete genome	21689-21725	0	1.0
NZ_CP019870_15	15.5\|2723076\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2723076-2723112	37	HM568888	Clostridium phage phiCD38-2, complete genome	21445-21481	0	1.0
NZ_CP019870_15	15.5\|2723076\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2723076-2723112	37	NC_028958	Clostridium phage phiCD146, complete genome	21007-21043	0	1.0
NZ_CP019870_2	2.8\|752590\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752590-752625	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	44969-45004	1	0.972
NZ_CP019870_2	2.16\|753113\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753113-753149	37	JX145341	Clostridium phage phiMMP02, complete genome	24321-24357	1	0.973
NZ_CP019870_2	2.18\|753244\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753244-753280	37	NC_009231	Clostridium phage phiC2, complete genome	17948-17984	1	0.973
NZ_CP019870_2	2.22\|753506\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753506-753542	37	KU057941	Clostridium phage CDSH1, complete genome	18999-19035	1	0.973
NZ_CP019870_2	2.22\|753506\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753506-753542	37	LN881738	Escherichia phage slur17, complete genome	1402-1438	1	0.973
NZ_CP019870_2	2.22\|753506\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753506-753542	37	HM568888	Clostridium phage phiCD38-2, complete genome	18495-18531	1	0.973
NZ_CP019870_2	2.22\|753506\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753506-753542	37	NC_028958	Clostridium phage phiCD146, complete genome	18504-18540	1	0.973
NZ_CP019870_9	9.5\|1257474\|36\|NZ_CP019870\|PILER-CR,CRT	1257474-1257509	36	LN681542	Clostridium phage phiMMP03, complete genome	49700-49735	1	0.972
NZ_CP019870_9	9.5\|1257474\|36\|NZ_CP019870\|PILER-CR,CRT	1257474-1257509	36	HG531805	Clostridium phage CDMH1 complete genome	50683-50718	1	0.972
NZ_CP019870_9	9.5\|1257474\|36\|NZ_CP019870\|PILER-CR,CRT	1257474-1257509	36	NC_009231	Clostridium phage phiC2, complete genome	53238-53273	1	0.972
NZ_CP019870_9	9.13\|1257473\|37\|NZ_CP019870\|CRISPRCasFinder	1257473-1257509	37	LN681542	Clostridium phage phiMMP03, complete genome	49699-49735	1	0.973
NZ_CP019870_9	9.13\|1257473\|37\|NZ_CP019870\|CRISPRCasFinder	1257473-1257509	37	HG531805	Clostridium phage CDMH1 complete genome	50682-50718	1	0.973
NZ_CP019870_9	9.13\|1257473\|37\|NZ_CP019870\|CRISPRCasFinder	1257473-1257509	37	NC_009231	Clostridium phage phiC2, complete genome	53237-53273	1	0.973
NZ_CP019870_10	10.12\|1501601\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1501601-1501636	36	GU949551	Clostridium phage phiCD6356, complete genome	9828-9863	1	0.972
NZ_CP019870_10	10.13\|1501666\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1501666-1501702	37	GU949551	Clostridium phage phiCD6356, complete genome	12395-12431	1	0.973
NZ_CP019870_12	12.8\|2226832\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2226832-2226868	37	MF547662	Clostridioides phage LIBA6276, complete genome	120081-120117	1	0.973
NZ_CP019870_12	12.8\|2226832\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2226832-2226868	37	MF547663	Clostridioides phage LIBA2945, complete genome	118710-118746	1	0.973
NZ_CP019870_13	13.5\|2403188\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403188-2403224	37	LN681539	Clostridium phage phiCD505, complete genome	48459-48495	1	0.973
NZ_CP019870_13	13.5\|2403188\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403188-2403224	37	HG531805	Clostridium phage CDMH1 complete genome	51181-51217	1	0.973
NZ_CP019870_13	13.5\|2403188\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403188-2403224	37	JX145341	Clostridium phage phiMMP02, complete genome	47538-47574	1	0.973
NZ_CP019870_13	13.5\|2403188\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403188-2403224	37	NC_011398	Clostridium phage phiCD27, complete genome	50064-50100	1	0.973
NZ_CP019870_13	13.5\|2403188\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403188-2403224	37	NC_048642	Clostridium phage CDKM9, complete genome	48903-48939	1	0.973
NZ_CP019870_13	13.8\|2403386\|38\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403386-2403423	38	JX145342	Clostridium phage phiMMP04, complete genome	5667-5704	1	0.974
NZ_CP019870_13	13.8\|2403386\|38\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403386-2403423	38	LN681538	Clostridium phage phiCD481-1, complete genome	6132-6169	1	0.974
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	HM568888	Clostridium phage phiCD38-2, complete genome	28960-28996	1	0.973
NZ_CP019870_13	13.17\|2403983\|38\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403983-2404020	38	NC_028905	Clostridium phage phiCD111, complete genome	16430-16467	1	0.974
NZ_CP019870_15	15.4\|2723010\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2723010-2723046	37	LN681534	Clostridium phage phiCD24-1, complete genome	24786-24822	1	0.973
NZ_CP019870_17	17.1\|4045285\|39\|NZ_CP019870\|CRISPRCasFinder	4045285-4045323	39	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	3081-3119	1	0.974
NZ_CP019870_2	2.20\|753376\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753376-753411	36	KU057941	Clostridium phage CDSH1, complete genome	16157-16192	2	0.944
NZ_CP019870_2	2.20\|753376\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753376-753411	36	LN881738	Escherichia phage slur17, complete genome	4245-4280	2	0.944
NZ_CP019870_2	2.20\|753376\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753376-753411	36	HM568888	Clostridium phage phiCD38-2, complete genome	15653-15688	2	0.944
NZ_CP019870_2	2.23\|753572\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753572-753608	37	LN881738	Escherichia phage slur17, complete genome	4597-4633	2	0.946
NZ_CP019870_2	2.23\|753572\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753572-753608	37	KU057941	Clostridium phage CDSH1, complete genome	15804-15840	2	0.946
NZ_CP019870_2	2.23\|753572\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753572-753608	37	HM568888	Clostridium phage phiCD38-2, complete genome	15300-15336	2	0.946
NZ_CP019870_2	2.23\|753572\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753572-753608	37	NC_028958	Clostridium phage phiCD146, complete genome	15309-15345	2	0.946
NZ_CP019870_9	9.5\|1257474\|36\|NZ_CP019870\|PILER-CR,CRT	1257474-1257509	36	LN681539	Clostridium phage phiCD505, complete genome	47940-47975	2	0.944
NZ_CP019870_9	9.5\|1257474\|36\|NZ_CP019870\|PILER-CR,CRT	1257474-1257509	36	NC_048642	Clostridium phage CDKM9, complete genome	48384-48419	2	0.944
NZ_CP019870_9	9.13\|1257473\|37\|NZ_CP019870\|CRISPRCasFinder	1257473-1257509	37	LN681539	Clostridium phage phiCD505, complete genome	47939-47975	2	0.946
NZ_CP019870_9	9.13\|1257473\|37\|NZ_CP019870\|CRISPRCasFinder	1257473-1257509	37	NC_048642	Clostridium phage CDKM9, complete genome	48383-48419	2	0.946
NZ_CP019870_10	10.16\|1501862\|36\|NZ_CP019870\|CRISPRCasFinder,CRT	1501862-1501897	36	NZ_MG973074	Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence	22132-22167	2	0.944
NZ_CP019870_12	12.8\|2226832\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2226832-2226868	37	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	4209-4245	2	0.946
NZ_CP019870_12	12.8\|2226832\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2226832-2226868	37	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	40283-40319	2	0.946
NZ_CP019870_12	12.8\|2226832\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2226832-2226868	37	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	117755-117791	2	0.946
NZ_CP019870_12	12.8\|2226832\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2226832-2226868	37	LN681537	Clostridium phage phiCD211, complete genome	126617-126653	2	0.946
NZ_CP019870_13	13.3\|2403056\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403056-2403092	37	NZ_MG973074	Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence	102058-102094	2	0.946
NZ_CP019870_13	13.8\|2403386\|38\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403386-2403423	38	NC_028838	Clostridium phage phiCD506, complete genome	6106-6143	2	0.947
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	NC_048665	Clostridium phage phiCDHM14, complete genome	23068-23104	2	0.946
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	KU057941	Clostridium phage CDSH1, complete genome	29464-29500	2	0.946
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	MK473382	Clostridium phage JD032, complete genome	11361-11397	2	0.946
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	LN881738	Escherichia phage slur17, complete genome	32556-32592	2	0.946
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	NC_028838	Clostridium phage phiCD506, complete genome	22889-22925	2	0.946
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	HG796225	Clostridium phage phiCDHM13 complete genome	22568-22604	2	0.946
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	LN681538	Clostridium phage phiCD481-1, complete genome	22308-22344	2	0.946
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	HG798901	Clostridium phage phiCDHM11 complete genome	22568-22604	2	0.946
NZ_CP019870_15	15.1\|2722812\|36\|NZ_CP019870\|CRISPRCasFinder,CRT	2722812-2722847	36	NC_028996	Clostridium phage phiCDHM19, complete genome	34840-34875	2	0.944
NZ_CP019870_1	1.7\|287548\|33\|NZ_CP019870\|CRT	287548-287580	33	CP024687	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence	234935-234967	3	0.909
NZ_CP019870_1	1.7\|287548\|33\|NZ_CP019870\|CRT	287548-287580	33	CP024687	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence	236400-236432	3	0.909
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	326-352	3	0.889
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP053689	Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence	173133-173159	3	0.889
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	321821-321847	3	0.889
NZ_CP019870_13	13.2\|2402989\|38\|NZ_CP019870\|CRT,CRISPRCasFinder	2402989-2403026	38	NZ_MG973074	Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence	94861-94898	3	0.921
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	NC_028905	Clostridium phage phiCD111, complete genome	29238-29274	3	0.919
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	NC_028958	Clostridium phage phiCD146, complete genome	28522-28558	3	0.919
NZ_CP019870_15	15.1\|2722812\|36\|NZ_CP019870\|CRISPRCasFinder,CRT	2722812-2722847	36	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	31152-31187	3	0.917
NZ_CP019870_15	15.1\|2722812\|36\|NZ_CP019870\|CRISPRCasFinder,CRT	2722812-2722847	36	NC_007917	Clostridium phage phi CD119, complete genome	31152-31187	3	0.917
NZ_CP019870_1	1.11\|287737\|27\|NZ_CP019870\|CRT	287737-287763	27	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	321821-321847	4	0.852
NZ_CP019870_1	1.11\|287737\|27\|NZ_CP019870\|CRT	287737-287763	27	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	326-352	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NC_006869	Bacillus mycoides pSin9.7 plasmid	8649-8675	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	244739-244765	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	355712-355738	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP011146	Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence	35399-35425	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP011146	Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence	35526-35552	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	MT684599	Gordonia Phage Sephiroth, complete genome	9170-9196	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP004875	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence	77113-77139	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP004875	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence	77302-77328	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP011357	Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence	8749-8775	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP011357	Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence	8938-8964	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP015155	Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence	23368-23394	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP015155	Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence	23557-23583	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP015156	Bacillus thuringiensis strain Bc601 plasmid pBTBC6, complete sequence	109-135	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP015156	Bacillus thuringiensis strain Bc601 plasmid pBTBC6, complete sequence	89270-89296	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP011358	Bacillus thuringiensis strain YC-10 plasmid pYC2226, complete sequence	19559-19585	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP011358	Bacillus thuringiensis strain YC-10 plasmid pYC2226, complete sequence	19748-19774	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP013057	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-2, complete sequence	16545-16571	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP013057	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-2, complete sequence	16734-16760	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP013058	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence	80413-80439	4	0.852
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP013058	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence	80602-80628	4	0.852
NZ_CP019870_1	1.17\|288010\|27\|NZ_CP019870\|CRT	288010-288036	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	71165-71191	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68780-68806	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68789-68815	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68798-68824	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68807-68833	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68816-68842	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68825-68851	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68834-68860	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68843-68869	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68852-68878	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68861-68887	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68924-68950	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	90211-90237	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	90220-90246	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	90229-90255	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	90238-90264	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	90247-90273	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	90256-90282	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	90265-90291	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	90274-90300	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130573-130599	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130582-130608	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130591-130617	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130600-130626	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130627-130653	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130654-130680	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130663-130689	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130672-130698	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130681-130707	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130690-130716	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130699-130725	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130708-130734	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130717-130743	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130726-130752	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130753-130779	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	251893-251919	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	251965-251991	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	251983-252009	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	362-388	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	MN693798	Marine virus AFVG_250M119, complete genome	11467-11493	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	JF974339	Enterobacteria phage IME10, complete genome	23044-23070	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	131076-131102	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	131085-131111	4	0.852
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	321785-321811	4	0.852
NZ_CP019870_2	2.11\|752786\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752786-752822	37	NZ_MG019959	Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence	6285-6321	4	0.892
NZ_CP019870_4	4.1\|857489\|25\|NZ_CP019870\|CRISPRCasFinder	857489-857513	25	AP014353	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S39-C37, * SEQUENCING IN PROGRESS *	27053-27077	4	0.84
NZ_CP019870_4	4.1\|857489\|25\|NZ_CP019870\|CRISPRCasFinder	857489-857513	25	NZ_CP018873	Acinetobacter haemolyticus strain TJS01 plasmid pAHTJS2, complete sequence	6571-6595	4	0.84
NZ_CP019870_1	1.10\|287686\|33\|NZ_CP019870\|CRT	287686-287718	33	CP024691	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-7-9K, complete sequence	91-123	5	0.848
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP053689	Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence	173259-173285	5	0.815
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP012105	Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence	289-315	5	0.815
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	NZ_CP012105	Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence	6672-6698	5	0.815
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	MN693662	Marine virus AFVG_250M383, complete genome	6781-6807	5	0.815
NZ_CP019870_1	1.25\|288394\|36\|NZ_CP019870\|CRT	288394-288429	36	NZ_CP053689	Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence	173142-173177	5	0.861
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NC_015057	Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence	28056-28082	5	0.815
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	119-145	5	0.815
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	164-190	5	0.815
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	191-217	5	0.815
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	218-244	5	0.815
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	263-289	5	0.815
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	290-316	5	0.815
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	317-343	5	0.815
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	353-379	5	0.815
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	321794-321820	5	0.815
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	321830-321856	5	0.815
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	321857-321883	5	0.815
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	321902-321928	5	0.815
NZ_CP019870_1	1.11\|287737\|27\|NZ_CP019870\|CRT	287737-287763	27	NZ_CP053936	Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed4, complete sequence	11742-11768	6	0.778
NZ_CP019870_1	1.11\|287737\|27\|NZ_CP019870\|CRT	287737-287763	27	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	472793-472819	6	0.778
NZ_CP019870_1	1.11\|287737\|27\|NZ_CP019870\|CRT	287737-287763	27	NZ_CP053933	Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed2, complete sequence	41412-41438	6	0.778
NZ_CP019870_1	1.11\|287737\|27\|NZ_CP019870\|CRT	287737-287763	27	NZ_CP009718	Bacillus thuringiensis strain HD682 plasmid pBGN_2, complete sequence	15404-15430	6	0.778
NZ_CP019870_1	1.11\|287737\|27\|NZ_CP019870\|CRT	287737-287763	27	MK496806	Capybara microvirus Cap3_SP_481, complete genome	5033-5059	6	0.778
NZ_CP019870_1	1.21\|288214\|27\|NZ_CP019870\|CRT	288214-288240	27	MN693279	Marine virus AFVG_25M346, complete genome	16365-16391	6	0.778
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51363-51389	6	0.778
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	92-118	6	0.778
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	MN693383	Marine virus AFVG_25M295, complete genome	19797-19823	6	0.778
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	321929-321955	6	0.778
NZ_CP019870_1	1.26\|288448\|27\|NZ_CP019870\|CRT	288448-288474	27	MN693263	Marine virus AFVG_25M296, complete genome	13694-13720	6	0.778
NZ_CP019870_10	10.6\|1501202\|38\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1501202-1501239	38	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	9402-9439	6	0.842
NZ_CP019870_10	10.6\|1501202\|38\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1501202-1501239	38	NC_007917	Clostridium phage phi CD119, complete genome	9402-9439	6	0.842
NZ_CP019870_10	10.6\|1501202\|38\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1501202-1501239	38	NC_028996	Clostridium phage phiCDHM19, complete genome	9648-9685	6	0.842
NZ_CP019870_11	11.4\|1851224\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1851224-1851260	37	NC_028958	Clostridium phage phiCD146, complete genome	29644-29680	6	0.838
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	90277-90309	7	0.788
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	HQ632825	Prochlorococcus phage P-SSM5 genomic sequence	98583-98615	7	0.788
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	AY939844	Prochlorococcus phage P-SSM2, complete genome	240762-240794	7	0.788
NZ_CP019870_1	1.11\|287737\|27\|NZ_CP019870\|CRT	287737-287763	27	AP014420	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C167, * SEQUENCING IN PROGRESS *, 5 ordered pieces	10317-10343	7	0.741
NZ_CP019870_1	1.13\|287818\|33\|NZ_CP019870\|CRT	287818-287850	33	NZ_CP045329	Labrenzia sp. THAF191b plasmid pTHAF191b_a, complete sequence	30491-30523	7	0.788
NZ_CP019870_1	1.13\|287818\|33\|NZ_CP019870\|CRT	287818-287850	33	NZ_CP045345	Labrenzia sp. THAF187b plasmid pTHAF187b_a, complete sequence	375098-375130	7	0.788
NZ_CP019870_1	1.13\|287818\|33\|NZ_CP019870\|CRT	287818-287850	33	NZ_CP045335	Labrenzia sp. THAF191a plasmid pTHAF191a_b, complete sequence	321133-321165	7	0.788
NZ_CP019870_1	1.13\|287818\|33\|NZ_CP019870\|CRT	287818-287850	33	NZ_CP045381	Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence	273942-273974	7	0.788
NZ_CP019870_1	1.13\|287818\|33\|NZ_CP019870\|CRT	287818-287850	33	NZ_CP019631	Labrenzia aggregata strain RMAR6-6 plasmid unnamed1, complete sequence	351498-351530	7	0.788
NZ_CP019870_1	1.15\|287929\|27\|NZ_CP019870\|CRT	287929-287955	27	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	472820-472846	7	0.741
NZ_CP019870_1	1.20\|288154\|42\|NZ_CP019870\|CRT	288154-288195	42	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	131076-131117	7	0.833
NZ_CP019870_1	1.25\|288394\|36\|NZ_CP019870\|CRT	288394-288429	36	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68870-68905	7	0.806
NZ_CP019870_1	1.25\|288394\|36\|NZ_CP019870\|CRT	288394-288429	36	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68933-68968	7	0.806
NZ_CP019870_1	1.25\|288394\|36\|NZ_CP019870\|CRT	288394-288429	36	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	132459-132494	7	0.806
NZ_CP019870_2	2.1\|752127\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752127-752163	37	NZ_CP025983	Enterobacteriaceae bacterium A-F18 plasmid pAF18_1, complete sequence	68994-69030	7	0.811
NZ_CP019870_2	2.7\|752524\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752524-752560	37	NC_042023	Enterococcus phage phiSHEF5, complete genome	537-573	7	0.811
NZ_CP019870_2	2.7\|752524\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752524-752560	37	NZ_LR135198	Enterococcus faecium isolate E6055 plasmid 2	79180-79216	7	0.811
NZ_CP019870_2	2.7\|752524\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752524-752560	37	NZ_LR135198	Enterococcus faecium isolate E6055 plasmid 2	79228-79264	7	0.811
NZ_CP019870_4	4.3\|857618\|31\|NZ_CP019870\|CRISPRCasFinder	857618-857648	31	MG869618	Polaromonas sp. E5S plasmid pE5SP1, complete sequence	53570-53600	7	0.774
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	95-127	8	0.758
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	167-199	8	0.758
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	194-226	8	0.758
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	266-298	8	0.758
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	293-325	8	0.758
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	321848-321880	8	0.758
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	321920-321952	8	0.758
NZ_CP019870_1	1.20\|288154\|42\|NZ_CP019870\|CRT	288154-288195	42	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	90268-90309	8	0.81
NZ_CP019870_1	1.25\|288394\|36\|NZ_CP019870\|CRT	288394-288429	36	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	132546-132581	8	0.778
NZ_CP019870_1	1.25\|288394\|36\|NZ_CP019870\|CRT	288394-288429	36	NZ_CP011146	Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence	35481-35516	8	0.778
NZ_CP019870_2	2.7\|752524\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752524-752560	37	NZ_LR135198	Enterococcus faecium isolate E6055 plasmid 2	79168-79204	8	0.784
NZ_CP019870_2	2.7\|752524\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752524-752560	37	NZ_LR135198	Enterococcus faecium isolate E6055 plasmid 2	79216-79252	8	0.784
NZ_CP019870_2	2.7\|752524\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752524-752560	37	NZ_LR135340	Enterococcus faecium isolate E7356 plasmid 2	151265-151301	8	0.784
NZ_CP019870_2	2.14\|752982\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752982-753017	36	NZ_CP012203	Alteromonas macleodii strain HOT1A3 plasmid pAM1A3, complete sequence	96792-96827	8	0.778
NZ_CP019870_4	4.3\|857618\|31\|NZ_CP019870\|CRISPRCasFinder	857618-857648	31	LR606148	Rhizobium sp. Q54 genome assembly, plasmid: 5	444883-444913	8	0.742
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	NZ_CP020005	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence	203849-203885	8	0.784
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019062	Synechococcus phage ACG-2014d isolate Syn7803C93, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019121	Synechococcus phage ACG-2014d isolate Syn7803US78, complete genome	55454-55486	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019126	Synechococcus phage ACG-2014d isolate Syn7803US83, complete genome	55549-55581	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019047	Synechococcus phage ACG-2014d isolate Syn7803C73, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019072	Synechococcus phage ACG-2014d isolate Syn7803US108, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019032	Synechococcus phage ACG-2014d isolate Syn7803C49, complete genome	55464-55496	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019078	Synechococcus phage ACG-2014d isolate Syn7803US114, complete genome	55454-55486	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019165	Synechococcus phage ACG-2014d isolate Syn7803C40, complete genome	55459-55491	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019124	Synechococcus phage ACG-2014d isolate Syn7803US80, complete genome	55606-55638	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019074	Synechococcus phage ACG-2014d isolate Syn7803US110, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019034	Synechococcus phage ACG-2014d isolate Syn7803C54, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019127	Synechococcus phage ACG-2014d isolate Syn7803US85, complete genome	55463-55495	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019118	Synechococcus phage ACG-2014d isolate Syn7803US64, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019075	Synechococcus phage ACG-2014d isolate Syn7803US111, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019131	Synechococcus phage ACG-2014d isolate Syn7803US95, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019057	Synechococcus phage ACG-2014d isolate Syn7803C89, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019056	Synechococcus phage ACG-2014d isolate Syn7803C88, partial genome	55575-55607	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019160	Synechococcus phage ACG-2014d isolate Syn7803C35, complete genome	55460-55492	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019112	Synechococcus phage ACG-2014d isolate Syn7803US59, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019073	Synechococcus phage ACG-2014d isolate Syn7803US109, complete genome	55460-55492	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019077	Synechococcus phage ACG-2014d isolate Syn7803US113, complete genome	55460-55492	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019129	Synechococcus phage ACG-2014d isolate Syn7803US89, complete genome	55461-55493	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019031	Synechococcus phage ACG-2014d isolate Syn7803C48, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019079	Synechococcus phage ACG-2014d isolate Syn7803US115, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019035	Synechococcus phage ACG-2014d isolate Syn7803C55, complete genome	53795-53827	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019120	Synechococcus phage ACG-2014d isolate Syn7803US71, complete genome	55460-55492	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019036	Synechococcus phage ACG-2014d isolate Syn7803C57, complete genome	55451-55483	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019048	Synechococcus phage ACG-2014d isolate Syn7803C75, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019113	Synechococcus phage ACG-2014d isolate Syn7803US5, complete genome	55508-55540	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019140	Synechococcus phage ACG-2014d isolate Syn7803C109, complete genome	55458-55490	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019119	Synechococcus phage ACG-2014d isolate Syn7803US65, complete genome	55512-55544	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019162	Synechococcus phage ACG-2014d isolate Syn7803C37, complete genome	55505-55537	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019130	Synechococcus phage ACG-2014d isolate Syn7803US94, complete genome	55461-55493	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019115	Synechococcus phage ACG-2014d isolate Syn7803US61, complete genome	55386-55418	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019139	Synechococcus phage ACG-2014d isolate Syn7803C108, complete genome	55552-55584	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019125	Synechococcus phage ACG-2014d isolate Syn7803US82, complete genome	55460-55492	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019070	Synechococcus phage ACG-2014d isolate Syn7803US104, complete genome	55508-55540	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019028	Synechococcus phage ACG-2014d isolate Syn7803C45, complete genome	55463-55495	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019083	Synechococcus phage ACG-2014d isolate Syn7803US122, complete genome	55457-55489	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019164	Synechococcus phage ACG-2014d isolate Syn7803C39, complete genome	55523-55555	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019117	Synechococcus phage ACG-2014d isolate Syn7803US63, complete genome	55442-55474	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019046	Synechococcus phage ACG-2014d isolate Syn7803C72, complete genome	55458-55490	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019050	Synechococcus phage ACG-2014d isolate Syn7803C77, complete genome	55458-55490	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019029	Synechococcus phage ACG-2014d isolate Syn7803C46, complete genome	55454-55486	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	KJ019080	Synechococcus phage ACG-2014d isolate Syn7803US116, complete genome	55456-55488	9	0.727
NZ_CP019870_1	1.8\|287599\|33\|NZ_CP019870\|CRT	287599-287631	33	NC_026923	Synechococcus phage ACG-2014d isolate Syn7803C102, complete genome	55463-55495	9	0.727
NZ_CP019870_1	1.20\|288154\|42\|NZ_CP019870\|CRT	288154-288195	42	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	392-433	9	0.786
NZ_CP019870_1	1.20\|288154\|42\|NZ_CP019870\|CRT	288154-288195	42	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68765-68806	9	0.786
NZ_CP019870_1	1.20\|288154\|42\|NZ_CP019870\|CRT	288154-288195	42	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	321740-321781	9	0.786
NZ_CP019870_1	1.20\|288154\|42\|NZ_CP019870\|CRT	288154-288195	42	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	131067-131108	9	0.786
NZ_CP019870_1	1.20\|288154\|42\|NZ_CP019870\|CRT	288154-288195	42	MN693798	Marine virus AFVG_250M119, complete genome	11461-11502	9	0.786
NZ_CP019870_1	1.25\|288394\|36\|NZ_CP019870\|CRT	288394-288429	36	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	130989-131024	9	0.75
NZ_CP019870_1	1.25\|288394\|36\|NZ_CP019870\|CRT	288394-288429	36	CP024687	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence	234497-234532	9	0.75
NZ_CP019870_1	1.25\|288394\|36\|NZ_CP019870\|CRT	288394-288429	36	NZ_CP011146	Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence	35408-35443	9	0.75
NZ_CP019870_2	2.14\|752982\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	752982-753017	36	MF417891	Uncultured Caudovirales phage clone 10S_13, partial genome	3305-3340	9	0.75
NZ_CP019870_4	4.3\|857618\|31\|NZ_CP019870\|CRISPRCasFinder	857618-857648	31	NZ_MK748464	Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-PNG-07060 clone Ren-PNG-07060, complete sequence	24257-24287	9	0.71
NZ_CP019870_4	4.3\|857618\|31\|NZ_CP019870\|CRISPRCasFinder	857618-857648	31	NZ_MK748465	Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-PNG-07113 clone Ren-PNG-07113, complete sequence	24334-24364	9	0.71
NZ_CP019870_4	4.3\|857618\|31\|NZ_CP019870\|CRISPRCasFinder	857618-857648	31	NZ_MK748462	Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-Bali-16-03 clone Ren-Bali-16-03, complete sequence	24337-24367	9	0.71
NZ_CP019870_4	4.3\|857618\|31\|NZ_CP019870\|CRISPRCasFinder	857618-857648	31	NZ_MK748463	Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-Pal-02 clone Ren-Pal-02, complete sequence	24326-24356	9	0.71
NZ_CP019870_14	14.5\|2514604\|36\|NZ_CP019870\|CRISPRCasFinder,PILER-CR	2514604-2514639	36	NC_011247	Borrelia duttonii Ly plasmid pl165, complete sequence	20564-20599	9	0.75
NZ_CP019870_1	1.20\|288154\|42\|NZ_CP019870\|CRT	288154-288195	42	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68900-68941	10	0.762
NZ_CP019870_2	2.24\|753638\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753638-753673	36	NZ_CP025493	Legionella sainthelensi strain LA01-117 plasmid pLA01-117_113k, complete sequence	66204-66239	10	0.722
NZ_CP019870_10	10.5\|1501136\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1501136-1501172	37	MT774379	CrAssphage cr118_1, complete genome	40383-40419	10	0.73
NZ_CP019870_10	10.16\|1501862\|36\|NZ_CP019870\|CRISPRCasFinder,CRT	1501862-1501897	36	NZ_CP045274	Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence	47033-47068	10	0.722
NZ_CP019870_11	11.16\|1852016\|36\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1852016-1852051	36	MK448934	Streptococcus phage Javan422, complete genome	18225-18260	10	0.722
NZ_CP019870_12	12.13\|2227162\|37\|NZ_CP019870\|CRISPRCasFinder,CRT,PILER-CR	2227162-2227198	37	MN693289	Marine virus AFVG_25M43, complete genome	34102-34138	10	0.73
NZ_CP019870_1	1.25\|288394\|36\|NZ_CP019870\|CRT	288394-288429	36	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	68969-69004	11	0.694
NZ_CP019870_2	2.19\|753310\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	753310-753346	37	NZ_CP023496	Staphylococcus simulans strain FDAARGOS_383 plasmid unnamed, complete sequence	97606-97642	11	0.703
NZ_CP019870_10	10.7\|1501269\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1501269-1501305	37	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	269698-269734	11	0.703
NZ_CP019870_11	11.9\|1851555\|37\|NZ_CP019870\|PILER-CR,CRISPRCasFinder,CRT	1851555-1851591	37	NZ_CP033935	Chryseobacterium balustinum strain KC_1863 plasmid unnamed, complete sequence	25554-25590	11	0.703
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	NZ_CP015630	Borrelia turicatae strain BTE5EL plasmid lp159	125707-125743	11	0.703
NZ_CP019870_1	1.20\|288154\|42\|NZ_CP019870\|CRT	288154-288195	42	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	90205-90246	12	0.714
NZ_CP019870_1	1.25\|288394\|36\|NZ_CP019870\|CRT	288394-288429	36	NZ_CP047963	Aeromonas media strain MC64 plasmid pMC64A, complete sequence	193746-193781	12	0.667
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	KX397369	Erwinia phage vB_EamM_Kwan, complete genome	243798-243834	12	0.676
NZ_CP019870_13	13.11\|2403588\|37\|NZ_CP019870\|CRT,CRISPRCasFinder,PILER-CR	2403588-2403624	37	NC_048016	Erwinia phage Wellington, complete genome	242357-242393	12	0.676
NZ_CP019870_1	1.20\|288154\|42\|NZ_CP019870\|CRT	288154-288195	42	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	130558-130599	13	0.69

1. spacer 2.8|752590|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctttccataaaataccccctacttcatttttattta	CRISPR spacer
ctttccataaaataccccctacttcatttttattta	Protospacer
************************************

2. spacer 2.8|752590|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

ctttccataaaataccccctacttcatttttattta	CRISPR spacer
ctttccataaaataccccctacttcatttttattta	Protospacer
************************************

3. spacer 2.8|752590|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

ctttccataaaataccccctacttcatttttattta	CRISPR spacer
ctttccataaaataccccctacttcatttttattta	Protospacer
************************************

4. spacer 2.8|752590|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

ctttccataaaataccccctacttcatttttattta	CRISPR spacer
ctttccataaaataccccctacttcatttttattta	Protospacer
************************************

5. spacer 2.9|752655|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aagaccaagccacttccgcaattgcatcttctaacat	CRISPR spacer
aagaccaagccacttccgcaattgcatcttctaacat	Protospacer
*************************************

6. spacer 2.9|752655|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

aagaccaagccacttccgcaattgcatcttctaacat	CRISPR spacer
aagaccaagccacttccgcaattgcatcttctaacat	Protospacer
*************************************

7. spacer 2.9|752655|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

aagaccaagccacttccgcaattgcatcttctaacat	CRISPR spacer
aagaccaagccacttccgcaattgcatcttctaacat	Protospacer
*************************************

8. spacer 2.9|752655|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

aagaccaagccacttccgcaattgcatcttctaacat	CRISPR spacer
aagaccaagccacttccgcaattgcatcttctaacat	Protospacer
*************************************

9. spacer 2.9|752655|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

aagaccaagccacttccgcaattgcatcttctaacat	CRISPR spacer
aagaccaagccacttccgcaattgcatcttctaacat	Protospacer
*************************************

10. spacer 2.16|753113|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aagacaaggttcttcttttaagtggcaagctataaaa	CRISPR spacer
aagacaaggttcttcttttaagtggcaagctataaaa	Protospacer
*************************************

11. spacer 2.16|753113|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

aagacaaggttcttcttttaagtggcaagctataaaa	CRISPR spacer
aagacaaggttcttcttttaagtggcaagctataaaa	Protospacer
*************************************

12. spacer 2.16|753113|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

aagacaaggttcttcttttaagtggcaagctataaaa	CRISPR spacer
aagacaaggttcttcttttaagtggcaagctataaaa	Protospacer
*************************************

13. spacer 2.20|753376|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

tctctaaatccatctataacgttaccagcaaaatca	CRISPR spacer
tctctaaatccatctataacgttaccagcaaaatca	Protospacer
************************************

14. spacer 2.21|753441|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

aagaacttttcatgaacgtggaaaatattgagttca	CRISPR spacer
aagaacttttcatgaacgtggaaaatattgagttca	Protospacer
************************************

15. spacer 9.2|1257276|36|NZ_CP019870|PILER-CR,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

atttctagcgacttggtcggttgctccatttagctt	CRISPR spacer
atttctagcgacttggtcggttgctccatttagctt	Protospacer
************************************

16. spacer 9.2|1257276|36|NZ_CP019870|PILER-CR,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

atttctagcgacttggtcggttgctccatttagctt	CRISPR spacer
atttctagcgacttggtcggttgctccatttagctt	Protospacer
************************************

17. spacer 9.5|1257474|36|NZ_CP019870|PILER-CR,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

agagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
agagatgaactcagatagaaaaacatgtagatgtgt	Protospacer
************************************

18. spacer 9.5|1257474|36|NZ_CP019870|PILER-CR,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

agagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
agagatgaactcagatagaaaaacatgtagatgtgt	Protospacer
************************************

19. spacer 9.5|1257474|36|NZ_CP019870|PILER-CR,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

agagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
agagatgaactcagatagaaaaacatgtagatgtgt	Protospacer
************************************

20. spacer 9.10|1257275|37|NZ_CP019870|CRISPRCasFinder matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

tatttctagcgacttggtcggttgctccatttagctt	CRISPR spacer
tatttctagcgacttggtcggttgctccatttagctt	Protospacer
*************************************

21. spacer 9.10|1257275|37|NZ_CP019870|CRISPRCasFinder matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

tatttctagcgacttggtcggttgctccatttagctt	CRISPR spacer
tatttctagcgacttggtcggttgctccatttagctt	Protospacer
*************************************

22. spacer 9.13|1257473|37|NZ_CP019870|CRISPRCasFinder matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

tagagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
tagagatgaactcagatagaaaaacatgtagatgtgt	Protospacer
*************************************

23. spacer 9.13|1257473|37|NZ_CP019870|CRISPRCasFinder matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

tagagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
tagagatgaactcagatagaaaaacatgtagatgtgt	Protospacer
*************************************

24. spacer 9.13|1257473|37|NZ_CP019870|CRISPRCasFinder matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

tagagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
tagagatgaactcagatagaaaaacatgtagatgtgt	Protospacer
*************************************

25. spacer 11.3|1851161|34|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG019959 (Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaacttgtttccctctaaagcgtgtttagtagg	CRISPR spacer
ctaacttgtttccctctaaagcgtgtttagtagg	Protospacer
**********************************

26. spacer 11.3|1851161|34|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG019961 (Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence) position: , mismatch: 0, identity: 1.0

ctaacttgtttccctctaaagcgtgtttagtagg	CRISPR spacer
ctaacttgtttccctctaaagcgtgtttagtagg	Protospacer
**********************************

27. spacer 11.3|1851161|34|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG019962 (Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence) position: , mismatch: 0, identity: 1.0

ctaacttgtttccctctaaagcgtgtttagtagg	CRISPR spacer
ctaacttgtttccctctaaagcgtgtttagtagg	Protospacer
**********************************

28. spacer 11.3|1851161|34|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG019960 (Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctaacttgtttccctctaaagcgtgtttagtagg	CRISPR spacer
ctaacttgtttccctctaaagcgtgtttagtagg	Protospacer
**********************************

29. spacer 11.4|1851224|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

ctcttttgcgcagagtggttttttacttgtctaaata	CRISPR spacer
ctcttttgcgcagagtggttttttacttgtctaaata	Protospacer
*************************************

30. spacer 11.4|1851224|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

ctcttttgcgcagagtggttttttacttgtctaaata	CRISPR spacer
ctcttttgcgcagagtggttttttacttgtctaaata	Protospacer
*************************************

31. spacer 11.4|1851224|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 0, identity: 1.0

ctcttttgcgcagagtggttttttacttgtctaaata	CRISPR spacer
ctcttttgcgcagagtggttttttacttgtctaaata	Protospacer
*************************************

32. spacer 11.4|1851224|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

ctcttttgcgcagagtggttttttacttgtctaaata	CRISPR spacer
ctcttttgcgcagagtggttttttacttgtctaaata	Protospacer
*************************************

33. spacer 11.4|1851224|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

ctcttttgcgcagagtggttttttacttgtctaaata	CRISPR spacer
ctcttttgcgcagagtggttttttacttgtctaaata	Protospacer
*************************************

34. spacer 11.4|1851224|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

ctcttttgcgcagagtggttttttacttgtctaaata	CRISPR spacer
ctcttttgcgcagagtggttttttacttgtctaaata	Protospacer
*************************************

35. spacer 12.7|2226766|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gatgaatatcataagatgttatgtaattcattatatg	CRISPR spacer
gatgaatatcataagatgttatgtaattcattatatg	Protospacer
*************************************

36. spacer 12.12|2227095|38|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

ttactaatctctttttctgttaatgctttcaaagtaat	CRISPR spacer
ttactaatctctttttctgttaatgctttcaaagtaat	Protospacer
**************************************

37. spacer 12.16|2227359|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

ttatattttatataaaagagtgtcatatctttaatat	CRISPR spacer
ttatattttatataaaagagtgtcatatctttaatat	Protospacer
*************************************

38. spacer 12.16|2227359|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

ttatattttatataaaagagtgtcatatctttaatat	CRISPR spacer
ttatattttatataaaagagtgtcatatctttaatat	Protospacer
*************************************

39. spacer 12.16|2227359|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

ttatattttatataaaagagtgtcatatctttaatat	CRISPR spacer
ttatattttatataaaagagtgtcatatctttaatat	Protospacer
*************************************

40. spacer 12.16|2227359|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

ttatattttatataaaagagtgtcatatctttaatat	CRISPR spacer
ttatattttatataaaagagtgtcatatctttaatat	Protospacer
*************************************

41. spacer 12.16|2227359|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttatattttatataaaagagtgtcatatctttaatat	CRISPR spacer
ttatattttatataaaagagtgtcatatctttaatat	Protospacer
*************************************

42. spacer 12.18|2227491|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

ttgctaggcaatccatttttagaaagtactaaattct	CRISPR spacer
ttgctaggcaatccatttttagaaagtactaaattct	Protospacer
*************************************

43. spacer 13.17|2403983|38|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

taaagctggaaaagaaacagctataatgagtaataata	CRISPR spacer
taaagctggaaaagaaacagctataatgagtaataata	Protospacer
**************************************

44. spacer 13.17|2403983|38|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

taaagctggaaaagaaacagctataatgagtaataata	CRISPR spacer
taaagctggaaaagaaacagctataatgagtaataata	Protospacer
**************************************

45. spacer 13.17|2403983|38|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

taaagctggaaaagaaacagctataatgagtaataata	CRISPR spacer
taaagctggaaaagaaacagctataatgagtaataata	Protospacer
**************************************

46. spacer 15.4|2723010|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to MN718463 (Clostridium phage phiCDKH01, complete genome) position: , mismatch: 0, identity: 1.0

aagctagcggggatagacaatataaatatcaacactt	CRISPR spacer
aagctagcggggatagacaatataaatatcaacactt	Protospacer
*************************************

47. spacer 15.5|2723076|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

aaacggaatatatatatacagagcttagaggggaaca	CRISPR spacer
aaacggaatatatatatacagagcttagaggggaaca	Protospacer
*************************************

48. spacer 15.5|2723076|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

aaacggaatatatatatacagagcttagaggggaaca	CRISPR spacer
aaacggaatatatatatacagagcttagaggggaaca	Protospacer
*************************************

49. spacer 15.5|2723076|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

aaacggaatatatatatacagagcttagaggggaaca	CRISPR spacer
aaacggaatatatatatacagagcttagaggggaaca	Protospacer
*************************************

50. spacer 15.5|2723076|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

aaacggaatatatatatacagagcttagaggggaaca	CRISPR spacer
aaacggaatatatatatacagagcttagaggggaaca	Protospacer
*************************************

51. spacer 15.5|2723076|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

aaacggaatatatatatacagagcttagaggggaaca	CRISPR spacer
aaacggaatatatatatacagagcttagaggggaaca	Protospacer
*************************************

52. spacer 2.8|752590|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

ctttccataaaataccccctacttcatttttattta	CRISPR spacer
ctttccataaaataccccctagttcatttttattta	Protospacer
********************* **************

53. spacer 2.16|753113|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 1, identity: 0.973

aagacaaggttcttcttttaagtggcaagctataaaa	CRISPR spacer
aagacaaggttcttcttttaaatggcaagctataaaa	Protospacer
*********************.***************

54. spacer 2.18|753244|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.973

tacacataattacaacccagtttactttttgctacac	CRISPR spacer
tacacataattacaacccagtttactttttgctatac	Protospacer
**********************************.**

55. spacer 2.22|753506|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.973

ttgtcatttacgactaccatttctctagcatttatat	CRISPR spacer
ttatcatttacgactaccatttctctagcatttatat	Protospacer
**.**********************************

56. spacer 2.22|753506|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.973

ttgtcatttacgactaccatttctctagcatttatat	CRISPR spacer
ttatcatttacgactaccatttctctagcatttatat	Protospacer
**.**********************************

57. spacer 2.22|753506|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.973

ttgtcatttacgactaccatttctctagcatttatat	CRISPR spacer
ttatcatttacgactaccatttctctagcatttatat	Protospacer
**.**********************************

58. spacer 2.22|753506|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.973

ttgtcatttacgactaccatttctctagcatttatat	CRISPR spacer
ttatcatttacgactaccatttctctagcatttatat	Protospacer
**.**********************************

59. spacer 9.5|1257474|36|NZ_CP019870|PILER-CR,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.972

agagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
agagatgaactcagataggaaaacatgtagatgtgt	Protospacer
******************.*****************

60. spacer 9.5|1257474|36|NZ_CP019870|PILER-CR,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 1, identity: 0.972

agagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
agaaatgaactcagatagaaaaacatgtagatgtgt	Protospacer
***.********************************

61. spacer 9.5|1257474|36|NZ_CP019870|PILER-CR,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.972

agagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
agagatgaactcagataggaaaacatgtagatgtgt	Protospacer
******************.*****************

62. spacer 9.13|1257473|37|NZ_CP019870|CRISPRCasFinder matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.973

tagagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
tagagatgaactcagataggaaaacatgtagatgtgt	Protospacer
*******************.*****************

63. spacer 9.13|1257473|37|NZ_CP019870|CRISPRCasFinder matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 1, identity: 0.973

tagagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
tagaaatgaactcagatagaaaaacatgtagatgtgt	Protospacer
****.********************************

64. spacer 9.13|1257473|37|NZ_CP019870|CRISPRCasFinder matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.973

tagagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
tagagatgaactcagataggaaaacatgtagatgtgt	Protospacer
*******************.*****************

65. spacer 10.12|1501601|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.972

ttagaatcaaaagcacttaatcctagttctttcata	CRISPR spacer
ttggaatcaaaagcacttaatcctagttctttcata	Protospacer
**.*********************************

66. spacer 10.13|1501666|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.973

agctttttagcttcgtctactactttataagcaaagc	CRISPR spacer
aactttttagcttcgtctactactttataagcaaagc	Protospacer
*.***********************************

67. spacer 12.8|2226832|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 1, identity: 0.973

cggcaacagatttaataaatatatgtgaccttttaga	CRISPR spacer
ctgcaacagatttaataaatatatgtgaccttttaga	Protospacer
* ***********************************

68. spacer 12.8|2226832|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.973

cggcaacagatttaataaatatatgtgaccttttaga	CRISPR spacer
ctgcaacagatttaataaatatatgtgaccttttaga	Protospacer
* ***********************************

69. spacer 13.5|2403188|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.973

tatgtatcccccattaaaaaggcttagattaatttct	CRISPR spacer
tatgtatcccccattaaaaaggcttagattaacttct	Protospacer
********************************.****

70. spacer 13.5|2403188|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 1, identity: 0.973

tatgtatcccccattaaaaaggcttagattaatttct	CRISPR spacer
tatgtatcccccattaaaaaggcttagattaacttct	Protospacer
********************************.****

71. spacer 13.5|2403188|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 1, identity: 0.973

tatgtatcccccattaaaaaggcttagattaatttct	CRISPR spacer
tatgtatcccccattaaaaaggcttagattaacttct	Protospacer
********************************.****

72. spacer 13.5|2403188|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 1, identity: 0.973

tatgtatcccccattaaaaaggcttagattaatttct	CRISPR spacer
tatgtatcccccattaaaaaggcttagattaacttct	Protospacer
********************************.****

73. spacer 13.5|2403188|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.973

tatgtatcccccattaaaaaggcttagattaatttct	CRISPR spacer
tatgtatcccccattaaaaaggcttagattaacttct	Protospacer
********************************.****

74. spacer 13.8|2403386|38|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 1, identity: 0.974

atgaaagataattggaaaactaaagtgcaatctaaaaa	CRISPR spacer
atgaaagataattggaaaactaaagtgcaatctagaaa	Protospacer
**********************************.***

75. spacer 13.8|2403386|38|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 1, identity: 0.974

atgaaagataattggaaaactaaagtgcaatctaaaaa	CRISPR spacer
atgaaagataattggaaaactaaagtgcagtctaaaaa	Protospacer
*****************************.********

76. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.973

atgatattattataatattataaatataataatgagg	CRISPR spacer
atgatattattataatattgtaaatataataatgagg	Protospacer
*******************.*****************

77. spacer 13.17|2403983|38|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.974

taaagctggaaaagaaacagctataatgagtaataata	CRISPR spacer
taaagctggaaaagaaacagctataatgagtagtaata	Protospacer
********************************.*****

78. spacer 15.4|2723010|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to LN681534 (Clostridium phage phiCD24-1, complete genome) position: , mismatch: 1, identity: 0.973

aagctagcggggatagacaatataaatatcaacactt	CRISPR spacer
aagctagcggggatagataatataaatatcaacactt	Protospacer
*****************.*******************

79. spacer 17.1|4045285|39|NZ_CP019870|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.974

gcacagcgccaacaaacaaacttcacatgcgttcagttt	CRISPR spacer
gcacagcgccaacaaacaaacttcacatgtgttcagttt	Protospacer
*****************************.*********

80. spacer 2.20|753376|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.944

tctctaaatccatctataacgttaccagcaaaatca	CRISPR spacer
tctctaaatccatctataacattactagcaaaatca	Protospacer
********************.****.**********

81. spacer 2.20|753376|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.944

tctctaaatccatctataacgttaccagcaaaatca	CRISPR spacer
tctctaaatccatctataacattactagcaaaatca	Protospacer
********************.****.**********

82. spacer 2.20|753376|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.944

tctctaaatccatctataacgttaccagcaaaatca	CRISPR spacer
tctctaaatccatctataacattactagcaaaatca	Protospacer
********************.****.**********

83. spacer 2.23|753572|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.946

gggaaaatatgggaaaagttaactaatataatgcaaa	CRISPR spacer
ggcaaaatatgggaaaaattaactaatataatgcaaa	Protospacer
** **************.*******************

84. spacer 2.23|753572|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.946

gggaaaatatgggaaaagttaactaatataatgcaaa	CRISPR spacer
ggcaaaatatgggaaaaattaactaatataatgcaaa	Protospacer
** **************.*******************

85. spacer 2.23|753572|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.946

gggaaaatatgggaaaagttaactaatataatgcaaa	CRISPR spacer
ggcaaaatatgggaaaaattaactaatataatgcaaa	Protospacer
** **************.*******************

86. spacer 2.23|753572|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.946

gggaaaatatgggaaaagttaactaatataatgcaaa	CRISPR spacer
ggaaaaatatgggaaaaattaactaatataatgcaaa	Protospacer
**.**************.*******************

87. spacer 9.5|1257474|36|NZ_CP019870|PILER-CR,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 2, identity: 0.944

agagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
agaaatgaactcagataggaaaacatgtagatgtgt	Protospacer
***.**************.*****************

88. spacer 9.5|1257474|36|NZ_CP019870|PILER-CR,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 2, identity: 0.944

agagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
agaaatgaactcagataggaaaacatgtagatgtgt	Protospacer
***.**************.*****************

89. spacer 9.13|1257473|37|NZ_CP019870|CRISPRCasFinder matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 2, identity: 0.946

tagagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
tagaaatgaactcagataggaaaacatgtagatgtgt	Protospacer
****.**************.*****************

90. spacer 9.13|1257473|37|NZ_CP019870|CRISPRCasFinder matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 2, identity: 0.946

tagagatgaactcagatagaaaaacatgtagatgtgt	CRISPR spacer
tagaaatgaactcagataggaaaacatgtagatgtgt	Protospacer
****.**************.*****************

91. spacer 10.16|1501862|36|NZ_CP019870|CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.944

tgctgtgatttcactaataaaacaattaataattgt	CRISPR spacer
tgctgtgattttattaataaaacaattaataattgt	Protospacer
***********.*.**********************

92. spacer 12.8|2226832|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.946

cggcaacagatttaataaatatatgtgaccttttaga	CRISPR spacer
ctgcaacagatttaataaatatatgtgacattttaga	Protospacer
* *************************** *******

93. spacer 12.8|2226832|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.946

cggcaacagatttaataaatatatgtgaccttttaga	CRISPR spacer
cggcaacagatttaataaatatatgtgatcttctaga	Protospacer
****************************.***.****

94. spacer 12.8|2226832|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 2, identity: 0.946

cggcaacagatttaataaatatatgtgaccttttaga	CRISPR spacer
ctgcaacagatttaataaatatatgtgacattttaga	Protospacer
* *************************** *******

95. spacer 12.8|2226832|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 2, identity: 0.946

cggcaacagatttaataaatatatgtgaccttttaga	CRISPR spacer
ctgcaacagatttaataaatatatgtgacattttaga	Protospacer
* *************************** *******

96. spacer 13.3|2403056|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.946

gatttcaaatgattagaataaaaatatcagaattgct	CRISPR spacer
gattttaaatgatcagaataaaaatatcagaattgct	Protospacer
*****.*******.***********************

97. spacer 13.8|2403386|38|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 2, identity: 0.947

atgaaagataattggaaaactaaagtgcaatctaaaaa	CRISPR spacer
atgaaggataattggaaaactaaagtgcagtctaaaaa	Protospacer
*****.***********************.********

98. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.946

atgatattattataatattataaatataataatgagg	CRISPR spacer
acaatattattataatattataaatataataatgagg	Protospacer
*..**********************************

99. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.946

atgatattattataatattataaatataataatgagg	CRISPR spacer
acaatattattataatattataaatataataatgagg	Protospacer
*..**********************************

100. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.946

atgatattattataatattataaatataataatgagg	CRISPR spacer
acaatattattataatattataaatataataatgagg	Protospacer
*..**********************************

101. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.946

atgatattattataatattataaatataataatgagg	CRISPR spacer
acaatattattataatattataaatataataatgagg	Protospacer
*..**********************************

102. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 2, identity: 0.946

atgatattattataatattataaatataataatgagg	CRISPR spacer
acaatattattataatattataaatataataatgagg	Protospacer
*..**********************************

103. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.946

atgatattattataatattataaatataataatgagg	CRISPR spacer
acaatattattataatattataaatataataatgagg	Protospacer
*..**********************************

104. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 2, identity: 0.946

atgatattattataatattataaatataataatgagg	CRISPR spacer
acaatattattataatattataaatataataatgagg	Protospacer
*..**********************************

105. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 2, identity: 0.946

atgatattattataatattataaatataataatgagg	CRISPR spacer
acaatattattataatattataaatataataatgagg	Protospacer
*..**********************************

106. spacer 15.1|2722812|36|NZ_CP019870|CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 2, identity: 0.944

agtataaaaattagttacagatgtatcttttttgtt	CRISPR spacer
agtataaaaattagttacagatgtatcttttttact	Protospacer
*********************************..*

107. spacer 1.7|287548|33|NZ_CP019870|CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 3, identity: 0.909

gcaacaggatttggagtaacaggtccaacaggc	CRISPR spacer
ggaacaggaattggagtaacaggtccaactggc	Protospacer
* ******* ******************* ***

108. spacer 1.7|287548|33|NZ_CP019870|CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 3, identity: 0.909

gcaacaggatttggagtaacaggtccaacaggc	CRISPR spacer
ggaacaggaattggagtaacaggtccaactggc	Protospacer
* ******* ******************* ***

109. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 3, identity: 0.889

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gcaacaggagcaacaggagtaacagga	Protospacer
********  ****************.

110. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.889

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gcaacaggcccaacaggaataacggga	Protospacer
******************.****.**.

111. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 3, identity: 0.889

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gcaacaggagcaacaggagtaacagga	Protospacer
********  ****************.

112. spacer 13.2|2402989|38|NZ_CP019870|CRT,CRISPRCasFinder matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 3, identity: 0.921

ataagtaatataaatttatgtaaagcaacaaaagatgg	CRISPR spacer
gtaagtaatataaatctatgcaaagcaacaaaagatgg	Protospacer
.**************.****.*****************

113. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 3, identity: 0.919

atgatattattataatattataaatataataatgagg	CRISPR spacer
acaatattgttataatattataaatataataatgagg	Protospacer
*..*****.****************************

114. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 3, identity: 0.919

atgatattattataatattataaatataataatgagg	CRISPR spacer
acaatattgttataatattataaatataataatgagg	Protospacer
*..*****.****************************

115. spacer 15.1|2722812|36|NZ_CP019870|CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 3, identity: 0.917

agtataaaaattagttacagatgtatcttttttgtt	CRISPR spacer
agtataaaaaatagttacagatgtatcttttttact	Protospacer
********** **********************..*

116. spacer 15.1|2722812|36|NZ_CP019870|CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 3, identity: 0.917

agtataaaaattagttacagatgtatcttttttgtt	CRISPR spacer
agtataaaaaatagttacagatgtatcttttttact	Protospacer
********** **********************..*

117. spacer 1.11|287737|27|NZ_CP019870|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagacggagcaacaggagtaacaggt	CRISPR spacer
gcaacaggagcaacaggagtaacagga	Protospacer
***.  ********************

118. spacer 1.11|287737|27|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 4, identity: 0.852

gcagacggagcaacaggagtaacaggt	CRISPR spacer
gcaacaggagcaacaggagtaacagga	Protospacer
***.  ********************

119. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NC_006869 (Bacillus mycoides pSin9.7 plasmid) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
ccaacaggtccaacaggagaaacagga	Protospacer
 *******.********** ******.

120. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
tcaacaggcccaacaggaccaacagga	Protospacer
 ***************** .******.

121. spacer 1.15|287929|27|NZ_CP019870|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
ccaacaggaccaacaggactaacagga	Protospacer
 ******* ********* *******.

122. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP011146 (Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gcaacgggcccaacaggagcaacagaa	Protospacer
*****.*************.*****..

123. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP011146 (Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
ccagcaggcccaacaggagtaacgggc	Protospacer
 **.*******************.**

124. spacer 1.15|287929|27|NZ_CP019870|CRT matches to MT684599 (Gordonia Phage Sephiroth, complete genome) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
tcagcaggcacaacaggagtaacagga	Protospacer
 **.***** ****************.

125. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP004875 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

126. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP004875 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

127. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP011357 (Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

128. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP011357 (Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

129. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP015155 (Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

130. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP015155 (Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

131. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP015156 (Bacillus thuringiensis strain Bc601 plasmid pBTBC6, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

132. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP015156 (Bacillus thuringiensis strain Bc601 plasmid pBTBC6, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

133. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP011358 (Bacillus thuringiensis strain YC-10 plasmid pYC2226, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

134. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP011358 (Bacillus thuringiensis strain YC-10 plasmid pYC2226, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

135. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP013057 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-2, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

136. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP013057 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-2, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

137. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP013058 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

138. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP013058 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence) position: , mismatch: 4, identity: 0.852

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
gtaacaggaccaaccggagtaacagga	Protospacer
*.****** ***** ***********.

139. spacer 1.17|288010|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaaccggagcgacaggg	CRISPR spacer
gcaatgggagcaaccggagcaacaggg	Protospacer
***.  **************.******

140. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

141. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

142. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

143. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

144. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

145. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

146. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

147. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

148. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

149. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

150. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacgggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

151. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gctggaggagcaacaggagcaacagga	Protospacer
** *. ***********.*********

152. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

153. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

154. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

155. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

156. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

157. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

158. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

159. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacgggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

160. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

161. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

162. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

163. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gaagcaggagcaacaggagcaacagga	Protospacer
* **  ***********.*********

164. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gaagcaggagcaacaggagcaacagga	Protospacer
* **  ***********.*********

165. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

166. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

167. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

168. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

169. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

170. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

171. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

172. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

173. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacgggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

174. spacer 1.26|288448|27|NZ_CP019870|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacgggagcaaccggggcaacagga	Protospacer
***.  ******** ************

175. spacer 1.26|288448|27|NZ_CP019870|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaaccggagcaaccggggcaacagga	Protospacer
***. .******** ************

176. spacer 1.26|288448|27|NZ_CP019870|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaaccggggcaacagga	Protospacer
***.  ******** ************

177. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

178. spacer 1.26|288448|27|NZ_CP019870|CRT matches to MN693798 (Marine virus AFVG_250M119, complete genome) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

179. spacer 1.26|288448|27|NZ_CP019870|CRT matches to JF974339 (Enterobacteria phage IME10, complete genome) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
ggagatggtgcaacaggcgcaacagca	Protospacer
* ****** ******** ******* *

180. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

181. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

182. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 4, identity: 0.852

gcagatggagcaacaggggcaacagga	CRISPR spacer
gcaacaggagcaacaggagcaacagga	Protospacer
***.  ***********.*********

183. spacer 2.11|752786|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG019959 (Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence) position: , mismatch: 4, identity: 0.892

agtgtatttttatcattctatctactataccaaaaaa	CRISPR spacer
gatgtgattttatcattctatctactataccaaaaaa	Protospacer
..***. ******************************

184. spacer 4.1|857489|25|NZ_CP019870|CRISPRCasFinder matches to AP014353 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S39-C37, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 4, identity: 0.84

tccagatacagatgaaccaatagta	CRISPR spacer
tccagatacagaagaaccaatatac	Protospacer
************ *********

185. spacer 4.1|857489|25|NZ_CP019870|CRISPRCasFinder matches to NZ_CP018873 (Acinetobacter haemolyticus strain TJS01 plasmid pAHTJS2, complete sequence) position: , mismatch: 4, identity: 0.84

tccagatacagatgaaccaatagta	CRISPR spacer
accagctacagatgaaccaataaaa	Protospacer
 **** ****************. *

186. spacer 1.10|287686|33|NZ_CP019870|CRT matches to CP024691 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-7-9K, complete sequence) position: , mismatch: 5, identity: 0.848

gcaacaggaataggaataacaggtccaacaggt	CRISPR spacer
ggcacaggaataggtgtaacaggtccaacaggc	Protospacer
*  *********** .****************.

187. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
tcgacgggcccaacaggagtaacggga	Protospacer
 *.**.*****************.**.

188. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 5, identity: 0.815

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
ggacaaggcccaacaggaggaacaggc	Protospacer
* *  ************** ******

189. spacer 1.15|287929|27|NZ_CP019870|CRT matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 5, identity: 0.815

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
ggacaaggcccaacaggaggaacaggt	Protospacer
* *  ************** ******

190. spacer 1.15|287929|27|NZ_CP019870|CRT matches to MN693662 (Marine virus AFVG_250M383, complete genome) position: , mismatch: 5, identity: 0.815

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
ataacaagcccaacaggagaaacaggt	Protospacer
..****.************ ******

191. spacer 1.25|288394|36|NZ_CP019870|CRT matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.861

ttagcaggagcaacaggagcaacaggcccaatagga	CRISPR spacer
tcgacgggagcaacaggagcaacaggcccaacagga	Protospacer
*...*.*************************.****

192. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NC_015057 (Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
ggtgccggcgcaacaggggcaacagga	Protospacer
*  * .** ******************

193. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
gtaacgggagcaacaggagcaacagga	Protospacer
*.*.  ***********.*********

194. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
gtaacgggagcaacaggagcaacagga	Protospacer
*.*.  ***********.*********

195. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
gtaacgggagcaacaggagcaacagga	Protospacer
*.*.  ***********.*********

196. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
gtaacgggagcaacaggagcaacagga	Protospacer
*.*.  ***********.*********

197. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
gtaacgggagcaacaggagcaacagga	Protospacer
*.*.  ***********.*********

198. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
gtaacgggagcaacaggagcaacagga	Protospacer
*.*.  ***********.*********

199. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
gtaacgggagcaacaggagcaacagga	Protospacer
*.*.  ***********.*********

200. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
gtaacgggagcaacaggagcaacagga	Protospacer
*.*.  ***********.*********

201. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
gtaacgggagcaacaggagcaacagga	Protospacer
*.*.  ***********.*********

202. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
gtaacgggagcaacaggagcaacagga	Protospacer
*.*.  ***********.*********

203. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
gtaacgggagcaacaggagcaacagga	Protospacer
*.*.  ***********.*********

204. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 5, identity: 0.815

gcagatggagcaacaggggcaacagga	CRISPR spacer
gtaacgggagcaacaggagcaacagga	Protospacer
*.*.  ***********.*********

205. spacer 1.11|287737|27|NZ_CP019870|CRT matches to NZ_CP053936 (Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.778

gcagacggagcaacaggagtaacaggt	CRISPR spacer
ccgacgggagcaacaggaataacaggt	Protospacer
 *..  ************.********

206. spacer 1.11|287737|27|NZ_CP019870|CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

gcagacggagcaacaggagtaacaggt	CRISPR spacer
ctaacaggagcaacgggagtaacaggt	Protospacer
 .*.  ********.************

207. spacer 1.11|287737|27|NZ_CP019870|CRT matches to NZ_CP053933 (Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.778

gcagacggagcaacaggagtaacaggt	CRISPR spacer
ccgacgggagcaacaggaataacaggt	Protospacer
 *..  ************.********

208. spacer 1.11|287737|27|NZ_CP019870|CRT matches to NZ_CP009718 (Bacillus thuringiensis strain HD682 plasmid pBGN_2, complete sequence) position: , mismatch: 6, identity: 0.778

gcagacggagcaacaggagtaacaggt	CRISPR spacer
ccgacgggagcaacaggaataacaggt	Protospacer
 *..  ************.********

209. spacer 1.11|287737|27|NZ_CP019870|CRT matches to MK496806 (Capybara microvirus Cap3_SP_481, complete genome) position: , mismatch: 6, identity: 0.778

gcagacggagcaacaggagtaacaggt	CRISPR spacer
aaagaagcagcaacaggagtaacagca	Protospacer
. *** * *****************

210. spacer 1.21|288214|27|NZ_CP019870|CRT matches to MN693279 (Marine virus AFVG_25M346, complete genome) position: , mismatch: 6, identity: 0.778

ttagtaggtccaacaggagcgacggga	CRISPR spacer
cctgctggtccaacaggagcaacggga	Protospacer
.. *. **************.******

211. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 6, identity: 0.778

gcagatggagcaacaggggcaacagga	CRISPR spacer
aacaatggagccataggggcaacagga	Protospacer
.  .******* *.*************

212. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 6, identity: 0.778

gcagatggagcaacaggggcaacagga	CRISPR spacer
ccgacgggagcaacaggagcaacagga	Protospacer
 *..  ***********.*********

213. spacer 1.26|288448|27|NZ_CP019870|CRT matches to MN693383 (Marine virus AFVG_25M295, complete genome) position: , mismatch: 6, identity: 0.778

gcagatggagcaacaggggcaacagga	CRISPR spacer
aacgatggagcaacaggcccaacaggg	Protospacer
.  **************  *******.

214. spacer 1.26|288448|27|NZ_CP019870|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 6, identity: 0.778

gcagatggagcaacaggggcaacagga	CRISPR spacer
ccgacgggagcaacaggagcaacagga	Protospacer
 *..  ***********.*********

215. spacer 1.26|288448|27|NZ_CP019870|CRT matches to MN693263 (Marine virus AFVG_25M296, complete genome) position: , mismatch: 6, identity: 0.778

gcagatggagcaacaggggcaacagga	CRISPR spacer
aacgatggagcaacaggcccaacaggg	Protospacer
.  **************  *******.

216. spacer 10.6|1501202|38|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 6, identity: 0.842

gaggagattcagacagcgactaaaaagactgatataaa	CRISPR spacer
gaagtggcacagacagcgactaaaaagactgacataaa	Protospacer
**.* *.. ***********************.*****

217. spacer 10.6|1501202|38|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 6, identity: 0.842

gaggagattcagacagcgactaaaaagactgatataaa	CRISPR spacer
gaagtggcacagacagcgactaaaaagactgacataaa	Protospacer
**.* *.. ***********************.*****

218. spacer 10.6|1501202|38|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 6, identity: 0.842

gaggagattcagacagcgactaaaaagactgatataaa	CRISPR spacer
gaagtggcacagacagcgactaaaaagactgacataaa	Protospacer
**.* *.. ***********************.*****

219. spacer 11.4|1851224|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 6, identity: 0.838

ctcttttgcgcagagtggttttttacttgt---ctaaata	CRISPR spacer
ctcttttgcgcagagtggttttgtatttttaaactaa---	Protospacer
********************** **.** *   ****

220. spacer 1.8|287599|33|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.788

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
acaggagcaacaggagcaacaggagtatccggt	Protospacer
..*****.**************** ** . ***

221. spacer 1.8|287599|33|NZ_CP019870|CRT matches to HQ632825 (Prochlorococcus phage P-SSM5 genomic sequence) position: , mismatch: 7, identity: 0.788

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
attatattaacaggagcaaaaggatttataggt	Protospacer
.* . * ************ ****** ******

222. spacer 1.8|287599|33|NZ_CP019870|CRT matches to AY939844 (Prochlorococcus phage P-SSM2, complete genome) position: , mismatch: 7, identity: 0.788

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
attatattaacaggagcaaaaggatttataggt	Protospacer
.* . * ************ ****** ******

223. spacer 1.11|287737|27|NZ_CP019870|CRT matches to AP014420 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C167, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 7, identity: 0.741

gcagacggagcaacaggagtaacaggt	CRISPR spacer
aatatgggagcaacaggagcaacaggt	Protospacer
.  .  *************.*******

224. spacer 1.13|287818|33|NZ_CP019870|CRT matches to NZ_CP045329 (Labrenzia sp. THAF191b plasmid pTHAF191b_a, complete sequence) position: , mismatch: 7, identity: 0.788

gcaacaggatttggagtgacaggcccaacaggt	CRISPR spacer
gaccctgaattttgagtgacaggccgaacaggt	Protospacer
*   * *.**** ************ *******

225. spacer 1.13|287818|33|NZ_CP019870|CRT matches to NZ_CP045345 (Labrenzia sp. THAF187b plasmid pTHAF187b_a, complete sequence) position: , mismatch: 7, identity: 0.788

gcaacaggatttggagtgacaggcccaacaggt	CRISPR spacer
gaccctgaattttgagtgacaggccgaacaggt	Protospacer
*   * *.**** ************ *******

226. spacer 1.13|287818|33|NZ_CP019870|CRT matches to NZ_CP045335 (Labrenzia sp. THAF191a plasmid pTHAF191a_b, complete sequence) position: , mismatch: 7, identity: 0.788

gcaacaggatttggagtgacaggcccaacaggt	CRISPR spacer
gaccctgaattttgagtgacaggccgaacaggt	Protospacer
*   * *.**** ************ *******

227. spacer 1.13|287818|33|NZ_CP019870|CRT matches to NZ_CP045381 (Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence) position: , mismatch: 7, identity: 0.788

gcaacaggatttggagtgacaggcccaacaggt	CRISPR spacer
gaccctgaattttgagtgacaggccgaacaggt	Protospacer
*   * *.**** ************ *******

228. spacer 1.13|287818|33|NZ_CP019870|CRT matches to NZ_CP019631 (Labrenzia aggregata strain RMAR6-6 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaacaggatttggagtgacaggcccaacaggt	CRISPR spacer
gaccctgaattttgagtgacaggccgaacaggt	Protospacer
*   * *.**** ************ *******

229. spacer 1.15|287929|27|NZ_CP019870|CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.741

gcaacaggcccaacaggagtaacaggg	CRISPR spacer
cagttaggcccgacaggagtaacaggt	Protospacer
  . .******.**************

230. spacer 1.20|288154|42|NZ_CP019870|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 7, identity: 0.833

gtaggaataacaggagcaacaggagcaacaggagcgacaggt	CRISPR spacer
gctggtgcaacaggagcaacaggagcaacaggagcaacagga	Protospacer
*. ** ..***************************.*****

231. spacer 1.25|288394|36|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.806

ttagcaggagcaacaggagcaacaggcccaatagga	CRISPR spacer
gcaacaggagcaacaggagcaacagggccaacgggg	Protospacer
 .*.********************** ****..**.

232. spacer 1.25|288394|36|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.806

ttagcaggagcaacaggagcaacaggcccaatagga	CRISPR spacer
gcaacaggagcaacaggagcaacagggccaacgggg	Protospacer
 .*.********************** ****..**.

233. spacer 1.25|288394|36|NZ_CP019870|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 7, identity: 0.806

ttagcaggagcaacaggagcaacaggcccaatagga	CRISPR spacer
gcgggtggggcaacaggagcaacaggtccaatagga	Protospacer
 ..*  **.*****************.*********

234. spacer 2.1|752127|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025983 (Enterobacteriaceae bacterium A-F18 plasmid pAF18_1, complete sequence) position: , mismatch: 7, identity: 0.811

tggaaaacttgtcaaaaatagcatcaaagcatttata----	CRISPR spacer
tggaaatcttgtcagaaatagcatcaca----ttataaaat	Protospacer
****** *******.*********** *    *****

235. spacer 2.7|752524|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NC_042023 (Enterococcus phage phiSHEF5, complete genome) position: , mismatch: 7, identity: 0.811

aacaagaaaaaccaacaacaaaaccaacaacaaaaag	CRISPR spacer
caacagaacaaccaacaacaaaaccaacaaccaaacc	Protospacer
 *  **** ********************** ***

236. spacer 2.7|752524|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135198 (Enterococcus faecium isolate E6055 plasmid 2) position: , mismatch: 7, identity: 0.811

-aacaagaaaaaccaacaacaaaaccaacaacaaaaag	CRISPR spacer
caacaa-cagaaccaacaacagaaccaacaacagaacc	Protospacer
 *****  *.***********.***********.**

237. spacer 2.7|752524|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135198 (Enterococcus faecium isolate E6055 plasmid 2) position: , mismatch: 7, identity: 0.811

-aacaagaaaaaccaacaacaaaaccaacaacaaaaag	CRISPR spacer
caacaa-cagaaccaacaacagaaccaacaacagaacc	Protospacer
 *****  *.***********.***********.**

238. spacer 4.3|857618|31|NZ_CP019870|CRISPRCasFinder matches to MG869618 (Polaromonas sp. E5S plasmid pE5SP1, complete sequence) position: , mismatch: 7, identity: 0.774

tataataaatccgccaataccagaggtattg	CRISPR spacer
aaagataaatcagccagtaccagaggtgctg	Protospacer
 * .******* ****.**********..**

239. spacer 1.8|287599|33|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 8, identity: 0.758

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
acgggagcaacaggagcaacaggagtaacggga	Protospacer
...****.**************** ***..**

240. spacer 1.8|287599|33|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 8, identity: 0.758

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
acgggagcaacaggagcaacaggagtaacggga	Protospacer
...****.**************** ***..**

241. spacer 1.8|287599|33|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 8, identity: 0.758

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
acgggagcaacaggagcaacaggagtaacggga	Protospacer
...****.**************** ***..**

242. spacer 1.8|287599|33|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 8, identity: 0.758

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
acgggagcaacaggagcaacaggagtaacggga	Protospacer
...****.**************** ***..**

243. spacer 1.8|287599|33|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 8, identity: 0.758

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
acgggagcaacaggagcaacaggagtaacggga	Protospacer
...****.**************** ***..**

244. spacer 1.8|287599|33|NZ_CP019870|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 8, identity: 0.758

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
acgggagcaacaggagcaacaggagtaacggga	Protospacer
...****.**************** ***..**

245. spacer 1.8|287599|33|NZ_CP019870|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 8, identity: 0.758

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
acgggagcaacaggagcaacaggagtaacggga	Protospacer
...****.**************** ***..**

246. spacer 1.20|288154|42|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.81

gtaggaataacaggagcaacaggagcaacaggagcgacaggt	CRISPR spacer
acaggagcaacaggagcaacaggagcaacaggagtatccggt	Protospacer
..****..**************************.. * ***

247. spacer 1.25|288394|36|NZ_CP019870|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 8, identity: 0.778

ttagcaggagcaacaggagcaacaggcccaatagga	CRISPR spacer
ggaacaggggcaacaggagcaacaggaccagcggga	Protospacer
  *.****.***************** ***...***

248. spacer 1.25|288394|36|NZ_CP019870|CRT matches to NZ_CP011146 (Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence) position: , mismatch: 8, identity: 0.778

ttagcaggagcaacaggagcaacaggcccaatagga	CRISPR spacer
acaacgggcccaacaggagcaacgggcccaacagga	Protospacer
 .*.*.**  *************.*******.****

249. spacer 2.7|752524|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135198 (Enterococcus faecium isolate E6055 plasmid 2) position: , mismatch: 8, identity: 0.784

-aacaagaaaaaccaacaacaaaaccaacaacaaaaag	CRISPR spacer
caacga-cagaaccaacaacagaaccaacaacagaacc	Protospacer
 ***.*  *.***********.***********.**

250. spacer 2.7|752524|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135198 (Enterococcus faecium isolate E6055 plasmid 2) position: , mismatch: 8, identity: 0.784

-aacaagaaaaaccaacaacaaaaccaacaacaaaaag	CRISPR spacer
caacga-cagaaccaacaacagaaccaacaacagaacc	Protospacer
 ***.*  *.***********.***********.**

251. spacer 2.7|752524|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135340 (Enterococcus faecium isolate E7356 plasmid 2) position: , mismatch: 8, identity: 0.784

-aacaagaaaaaccaacaacaaaaccaacaacaaaaag	CRISPR spacer
caacga-cagaaccaacaacagaaccaacaacagaacc	Protospacer
 ***.*  *.***********.***********.**

252. spacer 2.14|752982|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012203 (Alteromonas macleodii strain HOT1A3 plasmid pAM1A3, complete sequence) position: , mismatch: 8, identity: 0.778

tatataaattttctttttcttctatttctaagttca	CRISPR spacer
cagctaaattttttatttcttctatttctaaactga	Protospacer
.*  ********.* ****************..* *

253. spacer 4.3|857618|31|NZ_CP019870|CRISPRCasFinder matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.742

tataataaatccgccaataccagaggtattg	CRISPR spacer
tatcataaatccgccaataccaagttgctcg	Protospacer
*** ******************..    *.*

254. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.784

atgatattattataatattataaatataataatgagg-	CRISPR spacer
gtgataatactataatattataaatat-acaataaaaa	Protospacer
.***** **.***************** *.***.*..

255. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019062 (Synechococcus phage ACG-2014d isolate Syn7803C93, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

256. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019121 (Synechococcus phage ACG-2014d isolate Syn7803US78, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

257. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019126 (Synechococcus phage ACG-2014d isolate Syn7803US83, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

258. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019047 (Synechococcus phage ACG-2014d isolate Syn7803C73, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

259. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019072 (Synechococcus phage ACG-2014d isolate Syn7803US108, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

260. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019032 (Synechococcus phage ACG-2014d isolate Syn7803C49, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

261. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019078 (Synechococcus phage ACG-2014d isolate Syn7803US114, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

262. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019165 (Synechococcus phage ACG-2014d isolate Syn7803C40, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

263. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019124 (Synechococcus phage ACG-2014d isolate Syn7803US80, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

264. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019074 (Synechococcus phage ACG-2014d isolate Syn7803US110, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

265. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019034 (Synechococcus phage ACG-2014d isolate Syn7803C54, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

266. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019127 (Synechococcus phage ACG-2014d isolate Syn7803US85, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

267. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019118 (Synechococcus phage ACG-2014d isolate Syn7803US64, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

268. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019075 (Synechococcus phage ACG-2014d isolate Syn7803US111, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

269. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019131 (Synechococcus phage ACG-2014d isolate Syn7803US95, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

270. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019057 (Synechococcus phage ACG-2014d isolate Syn7803C89, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

271. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019056 (Synechococcus phage ACG-2014d isolate Syn7803C88, partial genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

272. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019160 (Synechococcus phage ACG-2014d isolate Syn7803C35, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

273. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019112 (Synechococcus phage ACG-2014d isolate Syn7803US59, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

274. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019073 (Synechococcus phage ACG-2014d isolate Syn7803US109, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

275. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019077 (Synechococcus phage ACG-2014d isolate Syn7803US113, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

276. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019129 (Synechococcus phage ACG-2014d isolate Syn7803US89, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

277. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019031 (Synechococcus phage ACG-2014d isolate Syn7803C48, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

278. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019079 (Synechococcus phage ACG-2014d isolate Syn7803US115, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

279. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019035 (Synechococcus phage ACG-2014d isolate Syn7803C55, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

280. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019120 (Synechococcus phage ACG-2014d isolate Syn7803US71, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

281. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019036 (Synechococcus phage ACG-2014d isolate Syn7803C57, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

282. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019048 (Synechococcus phage ACG-2014d isolate Syn7803C75, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

283. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019113 (Synechococcus phage ACG-2014d isolate Syn7803US5, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

284. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019140 (Synechococcus phage ACG-2014d isolate Syn7803C109, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

285. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019119 (Synechococcus phage ACG-2014d isolate Syn7803US65, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

286. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019162 (Synechococcus phage ACG-2014d isolate Syn7803C37, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

287. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019130 (Synechococcus phage ACG-2014d isolate Syn7803US94, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

288. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019115 (Synechococcus phage ACG-2014d isolate Syn7803US61, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

289. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019139 (Synechococcus phage ACG-2014d isolate Syn7803C108, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

290. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019125 (Synechococcus phage ACG-2014d isolate Syn7803US82, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

291. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019070 (Synechococcus phage ACG-2014d isolate Syn7803US104, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

292. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019028 (Synechococcus phage ACG-2014d isolate Syn7803C45, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

293. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019083 (Synechococcus phage ACG-2014d isolate Syn7803US122, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

294. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019164 (Synechococcus phage ACG-2014d isolate Syn7803C39, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

295. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019117 (Synechococcus phage ACG-2014d isolate Syn7803US63, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

296. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019046 (Synechococcus phage ACG-2014d isolate Syn7803C72, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

297. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019050 (Synechococcus phage ACG-2014d isolate Syn7803C77, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

298. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019029 (Synechococcus phage ACG-2014d isolate Syn7803C46, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

299. spacer 1.8|287599|33|NZ_CP019870|CRT matches to KJ019080 (Synechococcus phage ACG-2014d isolate Syn7803US116, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

300. spacer 1.8|287599|33|NZ_CP019870|CRT matches to NC_026923 (Synechococcus phage ACG-2014d isolate Syn7803C102, complete genome) position: , mismatch: 9, identity: 0.727

gtaggagtaacaggagcaacaggattaataggt	CRISPR spacer
cttacagtaacagcagcaccaggattaatacca	Protospacer
 * . ******** **** ***********

301. spacer 1.20|288154|42|NZ_CP019870|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 9, identity: 0.786

gtaggaataacaggagcaacaggagcaacaggagcgacaggt	CRISPR spacer
acggggccaacaggagcaacaggagcaacgggagcaacagga	Protospacer
...**. .*********************.*****.*****

302. spacer 1.20|288154|42|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.786

gtaggaataacaggagcaacaggagcaacaggagcgacaggt	CRISPR spacer
ggaccagcaggaggagcaacaggagcaacaggagcaacagga	Protospacer
* *  *..*. ************************.*****

303. spacer 1.20|288154|42|NZ_CP019870|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 9, identity: 0.786

gtaggaataacaggagcaacaggagcaacaggagcgacaggt	CRISPR spacer
acggggccaacaggagcaacaggagcaacgggagcaacagga	Protospacer
...**. .*********************.*****.*****

304. spacer 1.20|288154|42|NZ_CP019870|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 9, identity: 0.786

gtaggaataacaggagcaacaggagcaacaggagcgacaggt	CRISPR spacer
acaggagcaacaggagcaacaggagcaacaggacctagtgct	Protospacer
..****..************************* * *  * *

305. spacer 1.20|288154|42|NZ_CP019870|CRT matches to MN693798 (Marine virus AFVG_250M119, complete genome) position: , mismatch: 9, identity: 0.786

gtaggaataacaggagcaacaggagcaacaggagcgacaggt	CRISPR spacer
gccgtagcaacaggagcaacaggagcaacaggaggcacagta	Protospacer
*. * *..**************************  ****

306. spacer 1.25|288394|36|NZ_CP019870|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 9, identity: 0.75

ttagcaggagcaacaggagcaacaggcccaatagga	CRISPR spacer
accacaggagcaacaggaccaataggcccaactggt	Protospacer
 . .************** ***.********. **

307. spacer 1.25|288394|36|NZ_CP019870|CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 9, identity: 0.75

ttagcaggagcaacaggagcaacaggcccaatagga	CRISPR spacer
gctggtggcccaataggagaaacaggcccaatagga	Protospacer
 . *  **  ***.***** ****************

308. spacer 1.25|288394|36|NZ_CP019870|CRT matches to NZ_CP011146 (Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence) position: , mismatch: 9, identity: 0.75

ttagcaggagcaacaggagcaacaggcccaatagga	CRISPR spacer
caacggggcccaacaggagcaacgggcccaacagga	Protospacer
. *  .**  *************.*******.****

309. spacer 2.14|752982|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to MF417891 (Uncultured Caudovirales phage clone 10S_13, partial genome) position: , mismatch: 9, identity: 0.75

tatataaattttctttttcttctatttctaagttca	CRISPR spacer
gttgttcacgttctttttcttcaatttctaacttca	Protospacer
  *.*  *. ************ ******** ****

310. spacer 4.3|857618|31|NZ_CP019870|CRISPRCasFinder matches to NZ_MK748464 (Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-PNG-07060 clone Ren-PNG-07060, complete sequence) position: , mismatch: 9, identity: 0.71

tataataaatccgccaataccagaggtattg	CRISPR spacer
agtaataaatacgccaatatcagaggctgca	Protospacer
 .******** ********.******.  ..

311. spacer 4.3|857618|31|NZ_CP019870|CRISPRCasFinder matches to NZ_MK748465 (Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-PNG-07113 clone Ren-PNG-07113, complete sequence) position: , mismatch: 9, identity: 0.71

tataataaatccgccaataccagaggtattg	CRISPR spacer
agtaataaatacgccaatatcagaggctgca	Protospacer
 .******** ********.******.  ..

312. spacer 4.3|857618|31|NZ_CP019870|CRISPRCasFinder matches to NZ_MK748462 (Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-Bali-16-03 clone Ren-Bali-16-03, complete sequence) position: , mismatch: 9, identity: 0.71

tataataaatccgccaataccagaggtattg	CRISPR spacer
agtaataaatacgccaatatcagaggctgca	Protospacer
 .******** ********.******.  ..

313. spacer 4.3|857618|31|NZ_CP019870|CRISPRCasFinder matches to NZ_MK748463 (Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-Pal-02 clone Ren-Pal-02, complete sequence) position: , mismatch: 9, identity: 0.71

tataataaatccgccaataccagaggtattg	CRISPR spacer
agtaataaatacgccaatatcagaggctgca	Protospacer
 .******** ********.******.  ..

314. spacer 14.5|2514604|36|NZ_CP019870|CRISPRCasFinder,PILER-CR matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 9, identity: 0.75

-----atattttggatttattaatataaacataattaaaaa	CRISPR spacer
tagaaata-----aatttattaatataaatataataaaaac	Protospacer
     ***     .***************.***** ****

315. spacer 1.20|288154|42|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.762

gtaggaataacaggagcaacaggagcaacaggagcgacaggt	CRISPR spacer
acggggccgacaggagcaacaggagcaacgggagcaacagga	Protospacer
...**. ..********************.*****.*****

316. spacer 2.24|753638|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025493 (Legionella sainthelensi strain LA01-117 plasmid pLA01-117_113k, complete sequence) position: , mismatch: 10, identity: 0.722

gaaatttttagtgctattgcaactactcttgtttgt	CRISPR spacer
gaaattagtagtgctattgcaactacaggaatcact	Protospacer
******  ******************    .*.  *

317. spacer 10.5|1501136|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to MT774379 (CrAssphage cr118_1, complete genome) position: , mismatch: 10, identity: 0.73

caagatatttttaataaaatttctgagcgaactgttt	CRISPR spacer
caagatttttttaataaaatatctgaataccaggtat	Protospacer
****** ************* *****...    ** *

318. spacer 10.16|1501862|36|NZ_CP019870|CRISPRCasFinder,CRT matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 10, identity: 0.722

tgctgtgatttcactaataaaacaattaataattgt	CRISPR spacer
aaaaggtatttctctaataaaacaattaagaattca	Protospacer
 .  *  ***** **************** ****

319. spacer 11.16|1852016|36|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to MK448934 (Streptococcus phage Javan422, complete genome) position: , mismatch: 10, identity: 0.722

ctgagaaagttttattcttttttaatgttacaaatc	CRISPR spacer
ttttagcatttttattcttttttaatttttcaaata	Protospacer
.*  .. * ***************** ** *****

320. spacer 12.13|2227162|37|NZ_CP019870|CRISPRCasFinder,CRT,PILER-CR matches to MN693289 (Marine virus AFVG_25M43, complete genome) position: , mismatch: 10, identity: 0.73

aaaaatagtgctaagtcaagatatataataataataa	CRISPR spacer
gagcatagtgctaagtcaagagatgtaatacaaagtg	Protospacer
.*. ***************** **.*****  **  .

321. spacer 1.25|288394|36|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.694

ttagcaggagcaacaggagcaacaggcccaatagga	CRISPR spacer
ccgacaggagcaacaggagcatcaggtccacttatt	Protospacer
....***************** ****.*** * .

322. spacer 2.19|753310|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023496 (Staphylococcus simulans strain FDAARGOS_383 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

tatgaatatattacataatcataaagatttacaaatg	CRISPR spacer
ttaagatatattacataatcccaaagatttaagataa	Protospacer
*  ..*************** .********* .*  .

323. spacer 10.7|1501269|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 11, identity: 0.703

aactttatatctccatttgcatatccatctgatgaac	CRISPR spacer
tttttcatatctccatttgcataaccatcttctattg	Protospacer
  .**.***************** ******  *.

324. spacer 11.9|1851555|37|NZ_CP019870|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033935 (Chryseobacterium balustinum strain KC_1863 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

atacttggtcaatacatttcaaaagttgcaacagaac	CRISPR spacer
caaacggaaaaataaatttgaaaagttgcaacagaaa	Protospacer
  * . *.  **** **** ****************

325. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP015630 (Borrelia turicatae strain BTE5EL plasmid lp159) position: , mismatch: 11, identity: 0.703

atgatattattataatattataaatataataatgagg	CRISPR spacer
tattcattataataatataataaatataataaatata	Protospacer
    .***** ******* *************  * .

326. spacer 1.20|288154|42|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 12, identity: 0.714

---------gtaggaataacaggagcaacaggagcaacaggagcgacaggt	CRISPR spacer
ggacctgctggaggagcaacaggagcaacaggagcaacagga---------	Protospacer
         * ****..*************************

327. spacer 1.25|288394|36|NZ_CP019870|CRT matches to NZ_CP047963 (Aeromonas media strain MC64 plasmid pMC64A, complete sequence) position: , mismatch: 12, identity: 0.667

ttagcaggagcaacaggagcaacaggcccaatagga	CRISPR spacer
ttggcaggagcaacatgagcaacagggttttggctg	Protospacer
**.************ ********** ..   .  .

328. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to KX397369 (Erwinia phage vB_EamM_Kwan, complete genome) position: , mismatch: 12, identity: 0.676

atgatattattataatattataaatataataatgagg	CRISPR spacer
gatctattattataattatataaatataattaaataa	Protospacer
.   ************  ************ * . ..

329. spacer 13.11|2403588|37|NZ_CP019870|CRT,CRISPRCasFinder,PILER-CR matches to NC_048016 (Erwinia phage Wellington, complete genome) position: , mismatch: 12, identity: 0.676

atgatattattataatattataaatataataatgagg	CRISPR spacer
gatctattattataattatataaatataattaaataa	Protospacer
.   ************  ************ * . ..

330. spacer 1.20|288154|42|NZ_CP019870|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 13, identity: 0.69

---------gtaggaataacaggagcaacaggagcaacaggagcgacaggt	CRISPR spacer
cctgaatttttaggagcaacgggagcaacaggagcaacagga---------	Protospacer
          *****..***.*********************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

934187 : 943140

Catovirus(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009897935.1\|934187_935027_+	glycosyltransferase family 2 protein	A0A2P1ELT8	Moumouvirus	7.0e-05	26.3
WP_009891031.1\|935041_936217_+	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA
WP_003422862.1\|936245_936995_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.2e-16	38.8
WP_004454111.1\|937016_937925_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_003426498.1\|937972_938725_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	4.6e-16	40.5
WP_169460753.1\|938702_940046_+	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	2.3e-90	43.6
WP_003431768.1\|940051_941143_+	glycosyltransferase	A0A1V0SL50	Klosneuvirus	1.8e-16	26.2
WP_009897930.1\|941226_943140_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	1.1e-26	29.8

DBSCAN-SWA_2

1565726 : 1583831

Streptococcus_phage(81.82%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021369030.1\|1565726_1567121_+	cell division protein FtsK	A0A1S5SFB5	Streptococcus_phage	2.6e-174	65.3
WP_164662466.1\|1567322_1568522_+	replication initiation factor domain-containing protein	A0A1S5SEX3	Streptococcus_phage	2.8e-140	61.3
WP_003436853.1\|1568528_1568663_+	DUF3789 domain-containing protein	NA	NA	NA	NA
WP_003436850.1\|1569404_1571315_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	6.4e-38	29.4
WP_003436839.1\|1571481_1571643_+	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.4e-17	83.0
WP_003437701.1\|1571723_1572101_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_022621734.1\|1572207_1572504_+	hypothetical protein	NA	NA	NA	NA
WP_009902328.1\|1572422_1572926_+	antirestriction protein ArdA	NA	NA	NA	NA
WP_009902330.1\|1572943_1573447_+	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	4.9e-54	59.6
WP_011861948.1\|1573567_1573966_+	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	2.4e-48	73.0
WP_009902335.1\|1573943_1576394_+	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	76.3
WP_021369033.1\|1576393_1578589_+	YtxH domain-containing protein	A0A1S5SF30	Streptococcus_phage	1.5e-184	60.6
WP_021369027.1\|1578585_1579590_+	bifunctional lysozyme/C40 family peptidase	A0A1S5SEZ8	Streptococcus_phage	4.0e-132	69.3
WP_021378259.1\|1579609_1580512_+	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	3.2e-80	51.2
WP_021369143.1\|1580655_1581267_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_021378256.1\|1581263_1583831_+	pyruvate phosphate dikinase PEP/pyruvate-binding domain protein	A0A1V0SGR7	Hokovirus	1.6e-47	38.9

DBSCAN-SWA_3

2260817 : 2271053

Clostridium_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004454529.1\|2260817_2263577_-	calcium-translocating P-type ATPase, PMCA-type	A0A1J0FA34	Only_Syngen_Nebraska_virus	1.1e-91	29.6
WP_003430074.1\|2263566_2264196_-	TerD family protein	K4JRX3	Caulobacter_phage	1.1e-26	33.8
WP_004454531.1\|2264281_2264860_-	TerD family protein	NA	NA	NA	NA
WP_003420269.1\|2264898_2265477_-	TerD family protein	A0A0S4KZ16	Pseudomonas_phage	2.1e-16	36.9
WP_016729235.1\|2265836_2267000_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0A8WI33	Clostridium_phage	5.0e-219	98.7
WP_003435056.1\|2266996_2267395_-\|transposase	IS200/IS605 family transposase	A0A0A8WIU6	Clostridium_phage	2.5e-69	96.2
WP_003436430.1\|2267650_2269087_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_003436426.1\|2269178_2271053_-	asparagine synthase (glutamine-hydrolyzing)	A0A2P1ELF7	Moumouvirus	4.7e-25	30.1

DBSCAN-SWA_4

2474452 : 2484179

Pandoravirus(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003429425.1\|2474452_2475619_-	RNA polymerase sigma factor RpoD	M4SMP8	Cyanophage	9.6e-37	36.8
WP_009896376.1\|2475636_2477427_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.2e-51	32.6
WP_003419887.1\|2477681_2478467_-	3-deoxy-7-phosphoheptulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.7e-13	27.9
WP_003438641.1\|2478447_2478954_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	S4VNV0	Pandoravirus	1.2e-12	35.2
WP_009889257.1\|2478946_2479312_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_003438639.1\|2479322_2480114_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	1.1e-23	28.8
WP_003429416.1\|2480177_2480750_-	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	3.0e-44	51.6
WP_003438637.1\|2480775_2481477_-	hypothetical protein	NA	NA	NA	NA
WP_003438634.1\|2481510_2482254_-	aminotransferase class IV	NA	NA	NA	NA
WP_003438631.1\|2482243_2483593_-	aminodeoxychorismate synthase component I	S4VNU7	Pandoravirus	2.2e-37	41.2
WP_003438628.1\|2483594_2484179_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.1e-57	52.6

DBSCAN-SWA_5

2565601 : 2611079

Clostridium_phage(50.0%)

tail,portal,plate,integrase

attL 2562157:2562173|attR 2621689:2621705

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2562157:2562173	attL	NA	NA	NA	NA
WP_003428144.1\|2565601_2566000_+	helix-turn-helix domain-containing protein	A0A1L2JY18	Aeribacillus_phage	2.7e-07	29.7
WP_009889160.1\|2566216_2566426_-	hypothetical protein	NA	NA	NA	NA
WP_003428146.1\|2566457_2566667_-	helix-turn-helix transcriptional regulator	Q5YAA3	Bacillus_phage	5.9e-06	47.2
WP_003438466.1\|2566965_2567385_+	helix-turn-helix transcriptional regulator	S5MUV6	Brevibacillus_phage	5.4e-06	37.2
WP_003419674.1\|2567612_2568068_+	hypothetical protein	NA	NA	NA	NA
WP_003438465.1\|2568288_2568549_-	hypothetical protein	A0A0A8WE78	Clostridium_phage	6.4e-34	91.6
WP_003438464.1\|2568811_2569165_-	hypothetical protein	A0A0A8WJF2	Clostridium_phage	1.6e-11	42.1
WP_003438453.1\|2569181_2574503_-	hypothetical protein	A0A0A8WEY5	Clostridium_phage	7.8e-118	37.4
WP_003438452.1\|2574519_2575503_-\|tail	phage tail protein	A0A2H4J039	uncultured_Caudovirales_phage	6.4e-58	47.8
WP_003438451.1\|2575503_2576202_-	DUF2313 domain-containing protein	A0A090D815	Clostridium_phage	5.5e-48	56.9
WP_003438450.1\|2576198_2577251_-\|plate	baseplate J/gp47 family protein	A0A0A8WFP3	Clostridium_phage	2.7e-139	71.0
WP_003438449.1\|2577243_2577672_-	DUF2634 domain-containing protein	A0A0A8WJ32	Clostridium_phage	4.4e-64	82.4
WP_003438447.1\|2577671_2577998_-	DUF2577 family protein	J9QE86	Clostridium_phage	1.0e-52	94.4
WP_003438440.1\|2578013_2579543_-	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	2.2e-243	81.1
WP_003428168.1\|2579824_2580247_-	hypothetical protein	A0A090DBR9	Clostridium_phage	1.7e-52	71.1
WP_003438437.1\|2580246_2582700_-	hypothetical protein	A0A1V0DZX3	Clostridioides_phage	6.1e-17	55.7
WP_003419648.1\|2582699_2582867_-	hypothetical protein	NA	NA	NA	NA
WP_003419647.1\|2582893_2583340_-\|portal	phage portal protein	A0A090EUD0	Clostridium_phage	8.2e-13	36.0
WP_003419646.1\|2583453_2583882_-\|tail	phage tail tube protein	A0A1V0DZX1	Clostridioides_phage	2.8e-34	51.8
WP_003438414.1\|2583895_2584960_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A1V0DZX4	Clostridioides_phage	7.6e-97	52.8
WP_003438413.1\|2584964_2585408_-	hypothetical protein	A0A1V0DZX9	Clostridioides_phage	3.8e-18	35.4
WP_003428183.1\|2585656_2586097_-	hypothetical protein	A0A090EUN5	Clostridium_phage	6.0e-32	51.4
WP_003419641.1\|2586201_2586399_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003428185.1\|2586567_2586888_+	XRE family transcriptional regulator	A0A0A8WE28	Clostridium_phage	3.7e-23	54.5
WP_003428186.1\|2586969_2587476_+	hypothetical protein	A0A0A8WEK1	Clostridium_phage	4.0e-56	67.1
WP_009889131.1\|2588176_2588932_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_009889129.1\|2589074_2589503_-	CBS domain-containing protein	NA	NA	NA	NA
WP_003419624.1\|2589923_2590124_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	2.7e-16	66.2
WP_003438399.1\|2590306_2591476_-	amidase domain-containing protein	NA	NA	NA	NA
WP_003438396.1\|2591711_2592533_+	pyridoxamine kinase	NA	NA	NA	NA
WP_021368953.1\|2592608_2593997_-	two-component system sensor histidine kinase	NA	NA	NA	NA
WP_021363441.1\|2594131_2594890_-	lantibiotic immunity ABC transporter MutG family permease subunit	NA	NA	NA	NA
WP_003438387.1\|2594891_2595608_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	NA	NA	NA
WP_016729592.1\|2595609_2596317_-	lantibiotic protection ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.3e-56	48.9
WP_003428196.1\|2596432_2596969_-	lipoprotein	NA	NA	NA	NA
WP_003438380.1\|2597070_2598141_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_003438377.1\|2598133_2599192_-	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_009889116.1\|2599178_2599511_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_003438374.1\|2599709_2600831_+	galactosyldiacylglycerol synthase	NA	NA	NA	NA
WP_003428202.1\|2600958_2602857_-	glutamine synthetase	NA	NA	NA	NA
WP_003438370.1\|2603171_2603948_+	exonuclease domain-containing protein	NA	NA	NA	NA
WP_003438367.1\|2604039_2604792_-	exodeoxyribonuclease III	E3T4M6	Cafeteria_roenbergensis_virus	1.9e-57	45.6
WP_003438360.1\|2604952_2605903_-	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA
WP_003438357.1\|2606287_2607484_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003419561.1\|2607818_2608271_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003438353.1\|2608581_2610027_-	adenylosuccinate lyase	NA	NA	NA	NA
WP_009889110.1\|2610170_2611079_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
2621689:2621705	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3496187 : 3512252

Streptococcus_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021378142.1\|3496187_3497075_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.3e-22	30.3
WP_021378141.1\|3497071_3497698_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_021378154.1\|3497838_3498750_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	2.3e-78	48.2
WP_021378140.1\|3498767_3499778_-	lysozyme family protein	A0A1S5SEZ8	Streptococcus_phage	9.6e-126	66.5
WP_021378147.1\|3499774_3501877_-	membrane protein	A0A1S5SF30	Streptococcus_phage	3.0e-174	71.5
WP_021378160.1\|3501939_3504390_-	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	74.0
WP_032513869.1\|3504376_3504766_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	3.2e-45	69.8
WP_078051035.1\|3504851_3505355_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	8.3e-54	61.2
WP_021378156.1\|3505371_3505857_-	antirestriction family protein	A0A1S5SF25	Streptococcus_phage	3.1e-13	32.4
WP_032513868.1\|3505853_3506075_-	hypothetical protein	NA	NA	NA	NA
WP_078051036.1\|3506173_3506935_-	iron-sulfur protein	NA	NA	NA	NA
WP_032513866.1\|3507008_3507230_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	6.9e-29	89.0
WP_021378164.1\|3507230_3507374_-	DUF3789 domain-containing protein	NA	NA	NA	NA
WP_074141888.1\|3507357_3508584_-	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	4.6e-138	58.6
WP_021378134.1\|3508851_3510249_-	cell division protein FtsK	A0A1S5SFB5	Streptococcus_phage	2.3e-170	64.6
WP_032513863.1\|3510266_3510635_-	YdcP family protein	A0A1S5SF96	Streptococcus_phage	1.3e-43	75.5
WP_032513861.1\|3510651_3510975_-	YdcP family protein	A0A1S5SF38	Streptococcus_phage	4.1e-38	74.5
WP_102135717.1\|3511175_3512252_-	DNA cytosine methyltransferase	A0A2K9V3X0	Faecalibacterium_phage	2.0e-28	61.7

DBSCAN-SWA_7

3770409 : 3779055

Synechococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003436063.1\|3770409_3771942_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	2.3e-38	49.7
WP_003436064.1\|3771934_3772528_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.3e-25	40.4
WP_003425286.1\|3772521_3773598_-	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	1.7e-64	42.2
WP_003425288.1\|3773591_3774959_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.6e-49	31.0
WP_003420966.1\|3774970_3775669_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	1.5e-45	43.9
WP_003425290.1\|3775674_3776151_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.9e-26	45.8
WP_003436071.1\|3776600_3777113_+	nitroreductase family protein	A0A1V0E011	Clostridioides_phage	7.8e-84	87.1
WP_003435058.1\|3777496_3778660_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0A8WI33	Clostridium_phage	1.7e-219	99.0
WP_003435056.1\|3778656_3779055_-\|transposase	IS200/IS605 family transposase	A0A0A8WIU6	Clostridium_phage	2.5e-69	96.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019870

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection