CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP018978	Escherichia coli strain Ecol_656 plasmid pEC656_1, complete sequence	0 crisprs	NA	0	0
NZ_CP018977	Escherichia coli strain Ecol_656 plasmid pEC656_KPC, complete sequence	0 crisprs	NA	0	1
NZ_CP018979	Escherichia coli strain Ecol_656 chromosome, complete genome	2 crisprs	cas3,csa3,c2c9_V-U4,WYL,DEDDh,DinG,RT	1	12

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1635 : 54051

Escherichia_phage(20.0%)

integrase,transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001452808.1\|1635_2427_-\|protease	zinc metalloprotease	NA	NA	NA	NA
WP_016359299.1\|2577_3843_-	translesion error-prone DNA polymerase V subunit MucB	F1C5A5	Cronobacter_phage	4.4e-120	54.0
WP_000861760.1\|3830_4271_-	translesion error-prone DNA polymerase V autoproteolytic subunit MucA	A0A1W6JNS2	Morganella_phage	1.2e-27	48.8
WP_000447669.1\|4686_5112_+	hypothetical protein	NA	NA	NA	NA
WP_000881513.1\|5169_5574_+	hypothetical protein	NA	NA	NA	NA
WP_016359300.1\|5583_5823_+	hypothetical protein	NA	NA	NA	NA
WP_000545925.1\|6707_7004_+	hypothetical protein	NA	NA	NA	NA
WP_001750003.1\|7000_7360_+	hypothetical protein	NA	NA	NA	NA
WP_013263793.1\|7428_7713_+	hypothetical protein	NA	NA	NA	NA
WP_016359303.1\|7921_8254_+	hypothetical protein	NA	NA	NA	NA
WP_012561131.1\|9613_10123_+	antirestriction protein ArdA	NA	NA	NA	NA
WP_012561134.1\|10954_11134_+	hypothetical protein	NA	NA	NA	NA
WP_020326461.1\|11595_11829_-	hypothetical protein	Q6UAT7	Klebsiella_phage	3.3e-05	45.5
WP_012561138.1\|12140_12509_-	hypothetical protein	NA	NA	NA	NA
WP_012561139.1\|12510_13227_-	StdB	NA	NA	NA	NA
WP_013279398.1\|13235_13622_-	hypothetical protein	NA	NA	NA	NA
WP_001749975.1\|14210_14627_+	hypothetical protein	NA	NA	NA	NA
WP_000342688.1\|14628_16158_+	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA
WP_012561142.1\|16157_19394_+	conjugative relaxase	NA	NA	NA	NA
WP_012561143.1\|19393_19792_+	hypothetical protein	NA	NA	NA	NA
WP_001247892.1\|19855_20146_+	nucleotidyltransferase	NA	NA	NA	NA
WP_001293886.1\|20142_20544_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_000215515.1\|20533_20890_+	cupin domain-containing protein	NA	NA	NA	NA
WP_000091613.1\|21144_21459_+	hypothetical protein	NA	NA	NA	NA
WP_094387719.1\|21631_22096_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	1.9e-20	36.2
WP_004152391.1\|22120_23836_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_004152392.1\|23945_26975_+\|transposase	IS3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004199214.1\|27081_28107_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152394.1\|28103_28883_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_004199234.1\|29269_30151_+	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
WP_004152397.1\|30400_31720_-\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
WP_016359293.1\|31996_32176_-	hypothetical protein	NA	NA	NA	NA
WP_012561144.1\|32175_33171_-	conjugal transfer protein TraG	NA	NA	NA	NA
WP_000101710.1\|33212_34373_-	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_019706045.1\|34372_35194_-	conjugal transfer protein TraO	NA	NA	NA	NA
WP_000646594.1\|35267_35966_-	type IV secretion system protein	NA	NA	NA	NA
WP_001257173.1\|35955_36102_-	conjugal transfer protein TraN	NA	NA	NA	NA
WP_001749958.1\|36184_37225_-	type IV secretion system protein	NA	NA	NA	NA
WP_001749959.1\|37240_37468_-	IncN-type entry exclusion lipoprotein EexN	NA	NA	NA	NA
WP_001749960.1\|37475_38189_-	hypothetical protein	NA	NA	NA	NA
WP_001749961.1\|38206_40807_-	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA
WP_000496058.1\|40806_41124_-	hypothetical protein	NA	NA	NA	NA
WP_001749962.1\|41173_41467_-	hypothetical protein	NA	NA	NA	NA
WP_000440698.1\|41476_41758_-	hypothetical protein	NA	NA	NA	NA
WP_001749963.1\|41766_42501_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_024129965.1\|42564_42915_+	H-NS histone family protein	NA	NA	NA	NA
WP_001749964.1\|42930_43275_+	hypothetical protein	NA	NA	NA	NA
WP_001749965.1\|43271_43586_+	KikA protein	NA	NA	NA	NA
WP_001452736.1\|43621_43933_+	hypothetical protein	NA	NA	NA	NA
WP_001749966.1\|43988_44630_+	restriction endonuclease	NA	NA	NA	NA
WP_001749967.1\|44634_44841_+	hypothetical protein	NA	NA	NA	NA
WP_001288432.1\|45222_46656_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
WP_004098817.1\|46689_47904_-	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_001389365.1\|48164_48929_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_004152787.1\|49312_49453_+	hypothetical protein	NA	NA	NA	NA
WP_000376623.1\|49435_49936_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000259031.1\|50063_50903_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000679427.1\|50896_51244_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_004187529.1\|51430_51928_-	trimethoprim-resistant dihydrofolate reductase DfrA21	A0A076GDN3	Bacillus_phage	4.9e-22	36.2
WP_000845048.1\|52075_53089_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_016359304.1\|53481_54051_+	recombinase family protein	E5FFF9	Burkholderia_phage	9.8e-35	42.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018979

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018979_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018979_1

3728264-3728405

Orphan

Consensus_repeat	Method
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018979_1

>merge|NZ_CP018979|1|3728264-3728405|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAGAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGCGCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

>NZ_CP018979|1|1|3728264-3728405|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	AAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGC
GCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018979.1\|WP_001313663.1\|3724988_3725378_+\|succinate-dehydrogenase-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|181900
NZ_CP018979.1\|WP_000775540.1\|3725718_3727485_+\|succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|181594
NZ_CP018979.1\|WP_000648957.1\|3737669_3740303_+\|mannosylglycerate-hydrolase	unknown	unknown	gnl\|CDD\|182093
NZ_CP018979.1\|WP_000509910.1\|3734844_3735567_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182065
NZ_CP018979.1\|WP_000568275.1\|3744820_3745960_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|184965
NZ_CP018979.1\|WP_000735581.1\|3720150_3721119_+\|C4-dicarboxylate-ABC-transporter	unknown	unknown	gnl\|CDD\|270387
NZ_CP018979.1\|WP_001048602.1\|3732705_3733872_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234813
NZ_CP018979.1\|WP_001531490.1\|3735735_3737652_+\|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC	unknown	unknown	gnl\|CDD\|182066
NZ_CP018979.1\|WP_000399432.1\|3718926_3720123_+\|UxaA-family-hydrolase	unknown	unknown	gnl\|CDD\|377287
NZ_CP018979.1\|WP_001237779.1\|3721178_3721640_+\|TRAP-transporter-small-permease	unknown	unknown	gnl\|CDD\|225632
NZ_CP018979.1\|WP_000884361.1\|3743236_3744805_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|185052
NZ_CP018979.1\|WP_000254365.1\|3725371_3725719_+\|succinate-dehydrogenase-membrane-anchor-subunit	unknown	unknown	gnl\|CDD\|181901
NZ_CP018979.1\|WP_001235263.1\|3727500_3728217_+\|succinate-dehydrogenase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|235652
NZ_CP018979.1\|WP_000126143.1\|3721639_3722950_+\|TRAP-transporter-large-permease	unknown	unknown	gnl\|CDD\|224509
NZ_CP018979.1\|WP_000025458.1\|3733871_3734741_+\|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|180194
NZ_CP018979.1\|WP_001305582.1\|3724485_3724593_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018979.1\|WP_000099866.1\|3731394_3732612_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl\|CDD\|235571
NZ_CP018979.1\|WP_001181475.1\|3728578_3731380_+\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499
NZ_CP018979.1\|WP_000725054.1\|3740500_3741694_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP018979.1\|WP_000785832.1\|3722996_3724280_-\|citrate-(Si)-synthase	unknown	unknown	gnl\|CDD\|180164

Protein	Function_ID	Function_description	E-value
NZ_CP018979.1\|WP_001313663.1\|3724988_3725378_+\|succinate-dehydrogenase-cytochrome-b556-subunit	gnl\|CDD\|181900	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit.	6.3386e-83
NZ_CP018979.1\|WP_000775540.1\|3725718_3727485_+\|succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|181594	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_CP018979.1\|WP_000648957.1\|3737669_3740303_+\|mannosylglycerate-hydrolase	gnl\|CDD\|182093	PRK09819, PRK09819, mannosylglycerate hydrolase.	0
NZ_CP018979.1\|WP_000509910.1\|3734844_3735567_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|182065	PRK09764, PRK09764, GntR family transcriptional regulator.	1.54929e-163
NZ_CP018979.1\|WP_000568275.1\|3744820_3745960_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|184965	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II.	0
NZ_CP018979.1\|WP_000735581.1\|3720150_3721119_+\|C4-dicarboxylate-ABC-transporter	gnl\|CDD\|270387	cd13669, PBP2_TRAP_TM0322_like, Periplasmic component of TRAP-type C4-dicarboxylate transport system TM0322 from Thermotoga maritima and similar proteins; the type 2 periplasmic binding protein fold. This subgroup includes the hyperthermophilic bacterium Thermotoga maritima TRAP-type C4-dicarboxylate transport system TM0322 and its closely related proteins. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.46494e-145
NZ_CP018979.1\|WP_001531490.1\|3735735_3737652_+\|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC	gnl\|CDD\|182066	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional.	0
NZ_CP018979.1\|WP_000399432.1\|3718926_3720123_+\|UxaA-family-hydrolase	gnl\|CDD\|377287	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus. Family members include the C termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyze the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyzes D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core.	5.6924e-134
NZ_CP018979.1\|WP_001237779.1\|3721178_3721640_+\|TRAP-transporter-small-permease	gnl\|CDD\|225632	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism].	2.66483e-21
NZ_CP018979.1\|WP_000884361.1\|3743236_3744805_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|185052	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA.	0
NZ_CP018979.1\|WP_000254365.1\|3725371_3725719_+\|succinate-dehydrogenase-membrane-anchor-subunit	gnl\|CDD\|181901	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit.	5.54037e-58
NZ_CP018979.1\|WP_001235263.1\|3727500_3728217_+\|succinate-dehydrogenase-iron-sulfur-subunit	gnl\|CDD\|235652	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	3.48257e-167
NZ_CP018979.1\|WP_000126143.1\|3721639_3722950_+\|TRAP-transporter-large-permease	gnl\|CDD\|224509	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism].	2.11617e-118
NZ_CP018979.1\|WP_000025458.1\|3733871_3734741_+\|succinate--CoA-ligase-subunit-alpha	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
NZ_CP018979.1\|WP_001048602.1\|3732705_3733872_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
NZ_CP018979.1\|WP_000099866.1\|3731394_3732612_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	0
NZ_CP018979.1\|WP_001181475.1\|3728578_3731380_+\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
NZ_CP018979.1\|WP_000725054.1\|3740500_3741694_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.01578e-17
NZ_CP018979.1\|WP_000785832.1\|3722996_3724280_-\|citrate-(Si)-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0

>NZ_CP018979.1|WP_001235263.1|3727500_3728217_+|succinate-dehydrogenase-iron-sulfur-subunit
MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA
>NZ_CP018979.1|WP_000775540.1|3725718_3727485_+|succinate-dehydrogenase-flavoprotein-subunit
MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY
>NZ_CP018979.1|WP_000254365.1|3725371_3725719_+|succinate-dehydrogenase-membrane-anchor-subunit
MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV
>NZ_CP018979.1|WP_001313663.1|3724988_3725378_+|succinate-dehydrogenase-cytochrome-b556-subunit
MIRNVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
>NZ_CP018979.1|WP_001305582.1|3724485_3724593_-|hypothetical-protein
MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV
>NZ_CP018979.1|WP_000785832.1|3722996_3724280_-|citrate-(Si)-synthase
MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDGMKIARPRQLYTGYAQRDFKSDIKK
>NZ_CP018979.1|WP_000126143.1|3721639_3722950_+|TRAP-transporter-large-permease
MTALSELLAGSWLDNWLMIIPLMFVCLFINMPVWLAMFCGILTYFLCYSNVPLMVAIQRLIATTQTPSLLAIPFFILLGTLMSYTGIAARILQIANVLIGRMRGGLGGANILVSTMMGGVSASNLADAAMLSRMMVPEMEQKGYSRGFAAAITASGSLITPIIPPGIALILYGLVADVSIGSMFMAGILPGLLCSAMLIVTVWLVAIRRGLKPSSEHWPKPKEVSVALVQAWPALFLIVAVIGGIRANIFTPTEAGAVAVLLVMFIGFVIYRELKISHVFTALSETARSTASVMLIIMASAALGWIFSLERAGITVAEFVTSLTDNKYVFLLIINLLLLVLGMFLEGSAILLILVPLLKPVVAHFGIDPVHFGIIMILNLSLGTLSPPVGTVMLLVCNTVQVSVGQFMREAVPLLISLILLLLVITYIPAISLLLV
>NZ_CP018979.1|WP_001237779.1|3721178_3721640_+|TRAP-transporter-small-permease
MRLLGKMIEVAAVLTLFILVIMTIAAVIMRYCFHMPLQWTEEVSGLLMIWVVMFGAVVAERDNTHLSIPFLADALTSRGQRILAFLVSLMSIILLVVMAWSAWKLAAGTAFKTTQILKISWFWIDIAVTVGAIGVACFTALQLIKKTPRKEGE
>NZ_CP018979.1|WP_000735581.1|3720150_3721119_+|C4-dicarboxylate-ABC-transporter
MKKLLTPLLFLLALFSPMLNAAPVTIKIAYESNPGEPADTVVKHWAELVKKKSNGDIVFELYPSSQLGSKQDITEQALMGMNIITISDVGFLTDYDADLGILFGPYLTEDPQKLFAIYASDWFKQKEQKLREKGVHIVMSNYLYGTRQIIAKKPIRTPEDLKGMKIRVPNNVMQIKAIEAMGATPTPMPLGDVYPALTQGMIDGVENPVSVLYGQKLHEQAKYLSMVNYLTNTSLWLGGEAFFSTLTPAQLDIIHQTAYEAGLYSQKITTEQDATMLKTMQEQGVEIIYPDVAPFKEKALKVYQQFPEWTPGLYDTIQQQLK
>NZ_CP018979.1|WP_000399432.1|3718926_3720123_+|UxaA-family-hydrolase
MEGYVRQNGRPGIRNTVQVIFMVECASHVAKKIAEGFPCHDVQYFGFSGCYPSDYGYRLVKNLATHSNVGGVLIISLGCENFDRRRLEQEVRESGRPCHTLVIQENKGTTNTITLGKQLVAEMLEQLADTPRCILNWSDLVVGTICGGSDGTSGITGNPAVGRAFDQLLEKGATCIFEESGELLGCEQHMMSRAASSQARDAIEVAMTKAERYYSLMGLGSFSNGNAEGGLTTQEEKSLGAYTKSGDALIAGVILPTQQTPFPGLWLMDVVPDGEPRFGYPNINDSSEALELIASGCHMVLFTTGRGSVIGSVIAPIIKVCNNPQTWEHLSDDMDVNAGRVISEGATLDDIADDIMQVIEHVANGQYCAAERLEHQEFVLTYKAFDYSKSAVCRADPR
>NZ_CP018979.1|WP_001181475.1|3728578_3731380_+|2-oxoglutarate-dehydrogenase-E1-component
MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAISEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE
>NZ_CP018979.1|WP_000099866.1|3731394_3732612_+|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase
MSSVDILVPDLPESVADATVATWHKKPGDVVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV
>NZ_CP018979.1|WP_001048602.1|3732705_3733872_+|ADP-forming-succinate--CoA-ligase-subunit-beta
MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK
>NZ_CP018979.1|WP_000025458.1|3733871_3734741_+|succinate--CoA-ligase-subunit-alpha
MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK
>NZ_CP018979.1|WP_000509910.1|3734844_3735567_-|GntR-family-transcriptional-regulator
MGHKPLYRQIADRIREQITCGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVETHSEVLIFEVIPADNFLQQQLQISEQDRVWHVKRVRYRKQKPVALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGQVFEYSRNAFNTDDYKFTLIAQRKSPR
>NZ_CP018979.1|WP_001531490.1|3735735_3737652_+|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC
MNLTTLTHRDALCLNVRFTSREEAIHALTQRLAALGKISSTEQFLEEVYCRESLGPTALGEGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTTHMKLLTALTTRLADDELRARIQSATTPDELLSALDDKGDAQHTASFSYAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNIYVEKQGANGIEERLTAEQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEALIQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMYRKLGGGMLGILMVPVLAAYTAYSLADKPALAPGFAAGLAANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLMLFVVGEPVAWINNSLTAWLNGLSGNNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMANGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWFGAALVGAAISTAILLIWRHHAVKHGNYLTDGVMP
>NZ_CP018979.1|WP_000648957.1|3737669_3740303_+|mannosylglycerate-hydrolase
MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILEDYFAVKPENKDRVKKLVEGGKLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDKTEFLWQSSDGSEVTAQVLPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMEKLREIYPQRKFVMSRFEEVFEQIEAQRESLAILKGEFIDGKYMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFDYHHGLLEKMWKEILKNHAHDSIGCCCSDKVHREIVARFELAEDMADNLIRFYMRKIADNMPQSDADKLVLFNLMPWPREEVINTTVRLRGSQFNLRDGRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQISQIVPSMGYRTLYIEANQLGNVVTPKSKTEGILENAFWQIALNEDGSLRLVDKDSGVRYDRVFQIEEGSDDGDEYDYSPAKEEWAITSANAKPQYDIIHEAWQSRAIIRYEIAVPRNLSERRAKQCSGRVGVETVITLSHNSRRIDADINLDNQADDHRIRVLIPTPFNTDVVLADTQFGSLTRPVKDCAMNVWQQEGWKEAPVPVWNMLNYAVLQEGRNGIAVFSEGLREFEVIGEENKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVSDSQLRGSFSCRLSLFSYIGTPVTAGVAQQARAWLTPVQCYNKIPWDAMKLNKAKFNVPESYSLLKMPPVGCLISALKKAEDRQELILRLFNPAELTSCDATVAFSRKVMTCTETMMNERFNTEKNEVLKELALFLPGQSRTFSYRIV
>NZ_CP018979.1|WP_000725054.1|3740500_3741694_+|tetratricopeptide-repeat-protein
MKKIVLPVALALLGMNAGAYAADVSIDILSATVKDKRIEGASVTLQRNGAQSVSGITNTSGSISLGTSFADNKDALLIVKKEGYSNLVVKCPCAGMTYAISPVMTNLDGMRVVLSWGEKPFDLDSHLIFPGGHIYFDSKEGTDANLDVDDTDSYGPETVTISKKHFGESYIYAVQDYSNKGLPNSNYLSASKAKVFVYVGSSLVRSYSVPAGKRGNIWTVFKLNPNGEFEDINSVTSANFNGTTLDVRDLATVIMPATDSSAPASPAMQNSGDTQLARKYNREGEAVYKTGQLEQAIQLFQQATELDGNYGQAFSNLGLAYQKNGNIAEAIWANRKAISLASGVNAATTRANSYYNIAKIYETSGQNAEALQHYQLAYTEKNKPSYEEAIARVKTKM
>NZ_CP018979.1|WP_000884361.1|3743236_3744805_+|cytochrome-ubiquinol-oxidase-subunit-I
MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR
>NZ_CP018979.1|WP_000568275.1|3744820_3745960_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY

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Crispr_ID: NZ_CP018979_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018979_2

3894471-3894553

Orphan

I-F

Consensus_repeat	Method
AGTTCACTGCCGTACAGGCAGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018979_2

>merge|NZ_CP018979|2|3894471-3894553|CRISPRCasFinder
AGTTCACTGCCGTACAGGCAGCTTAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACAAGTTCACTGCCGTACAGGCAGAT

>NZ_CP018979|2|2|3894471-3894553|CRISPRCasFinder
AGTTCACTGCCGTACAGGCAGCT	TAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACA
AGTTCACTGCCGTACAGGCAGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018979.1\|WP_000410785.1\|3891084_3891309_-\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|77494
NZ_CP018979.1\|WP_001351020.1\|3886846_3887803_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|225537
NZ_CP018979.1\|WP_000077041.1\|3901941_3906048_+\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP018979.1\|WP_000599803.1\|3885191_3886850_+\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP018979.1\|WP_000746478.1\|3887953_3889069_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP018979.1\|WP_000934041.1\|3891982_3894259_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP018979.1\|WP_001385255.1\|3899803_3900769_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP018979.1\|WP_000228473.1\|3901312_3901807_+\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP018979.1\|WP_000491137.1\|3882757_3883657_-\|L-lysine-exporter-LysO	unknown	unknown	gnl\|CDD\|225287
NZ_CP018979.1\|WP_001043561.1\|3897914_3899681_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP018979.1\|WP_001241674.1\|3895446_3896151_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP018979.1\|WP_000188152.1\|3889065_3891012_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP018979.1\|WP_000488716.1\|3884071_3884767_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP018979.1\|WP_000067797.1\|3906828_3908172_+\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
NZ_CP018979.1\|WP_000520781.1\|3891631_3891952_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP018979.1\|WP_000458841.1\|3880961_3882614_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP018979.1\|WP_001295343.1\|3906206_3906818_+\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP018979.1\|WP_001202204.1\|3896192_3897914_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP018979.1\|WP_000886683.1\|3908262_3909555_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP018979.1\|WP_001040187.1\|3894943_3895162_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954

Protein	Function_ID	Function_description	E-value
NZ_CP018979.1\|WP_000410785.1\|3891084_3891309_-\|cold-shock-like-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
NZ_CP018979.1\|WP_001351020.1\|3886846_3887803_-\|DUF535-domain-containing-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	3.43529e-131
NZ_CP018979.1\|WP_000077041.1\|3901941_3906048_+\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP018979.1\|WP_000599803.1\|3885191_3886850_+\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP018979.1\|WP_000746478.1\|3887953_3889069_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP018979.1\|WP_000934041.1\|3891982_3894259_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP018979.1\|WP_001385255.1\|3899803_3900769_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP018979.1\|WP_000228473.1\|3901312_3901807_+\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
NZ_CP018979.1\|WP_000491137.1\|3882757_3883657_-\|L-lysine-exporter-LysO	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	3.40497e-117
NZ_CP018979.1\|WP_001043561.1\|3897914_3899681_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP018979.1\|WP_001241674.1\|3895446_3896151_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.92039e-139
NZ_CP018979.1\|WP_000188152.1\|3889065_3891012_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP018979.1\|WP_000488716.1\|3884071_3884767_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	7.82992e-144
NZ_CP018979.1\|WP_000067797.1\|3906828_3908172_+\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP018979.1\|WP_000520781.1\|3891631_3891952_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
NZ_CP018979.1\|WP_000458841.1\|3880961_3882614_-\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP018979.1\|WP_001295343.1\|3906206_3906818_+\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125
NZ_CP018979.1\|WP_001202204.1\|3896192_3897914_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP018979.1\|WP_000886683.1\|3908262_3909555_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP018979.1\|WP_001040187.1\|3894943_3895162_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49

>NZ_CP018979.1|WP_000934041.1|3891982_3894259_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
>NZ_CP018979.1|WP_000520781.1|3891631_3891952_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NZ_CP018979.1|WP_000410785.1|3891084_3891309_-|cold-shock-like-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>NZ_CP018979.1|WP_000188152.1|3889065_3891012_+|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLEWKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNATGGTEPVVNTASGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE
>NZ_CP018979.1|WP_000746478.1|3887953_3889069_+|macrolide-transporter-subunit-MacA
MKKRKTVKKRYVIAMVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKINDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>NZ_CP018979.1|WP_001351020.1|3886846_3887803_-|DUF535-domain-containing-protein
MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAELTFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFCS
>NZ_CP018979.1|WP_000599803.1|3885191_3886850_+|ATP-dependent-endonuclease
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENIPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>NZ_CP018979.1|WP_000488716.1|3884071_3884767_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRN
>NZ_CP018979.1|WP_000491137.1|3882757_3883657_-|L-lysine-exporter-LysO
MFSGLLIILVPLIVGYLIPLRQKAALRVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSTTVILLCNIAALMWLERGLPWSNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>NZ_CP018979.1|WP_000458841.1|3880961_3882614_-|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIATLQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIIGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGEDFSAVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA
>NZ_CP018979.1|WP_001040187.1|3894943_3895162_-|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP018979.1|WP_001241674.1|3895446_3896151_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCDEFIRHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLSNNFWVPRCLFSPQE
>NZ_CP018979.1|WP_001202204.1|3896192_3897914_-|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPKVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGIYLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMCEKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>NZ_CP018979.1|WP_001043561.1|3897914_3899681_-|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLFLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQTALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGQIIEQGRYAELSVAGGPFATLLAHRQEEI
>NZ_CP018979.1|WP_001385255.1|3899803_3900769_-|thioredoxin-disulfide-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLTGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNTDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>NZ_CP018979.1|WP_000228473.1|3901312_3901807_+|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP018979.1|WP_000077041.1|3901941_3906048_+|DNA-translocase-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQSTVAWQPVPGPQTGEPVIAPAPEGYPQQPQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAAEQPVQQPYYATAAEQPAQQPYYAPAPEQAVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPTRPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNTEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAQQPQYQQPQQPVTQQPQYQQPQQPVVPQPQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>NZ_CP018979.1|WP_001295343.1|3906206_3906818_+|outer-membrane-lipoprotein-chaperone-LolA
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>NZ_CP018979.1|WP_000067797.1|3906828_3908172_+|replication-associated-recombination-protein-A
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAVGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>NZ_CP018979.1|WP_000886683.1|3908262_3909555_+|serine--tRNA-ligase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12111-12158	8	0.833
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	424237-424284	8	0.833
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7391-7438	10	0.792
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84215-84262	10	0.792
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87125-87172	10	0.792
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229237-229284	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229338-229385	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229439-229486	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239731-239778	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239832-239879	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239933-239980	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15006-15053	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230643-230690	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230744-230791	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230845-230892	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211613-211660	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211714-211761	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211815-211862	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31250-31297	11	0.771
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3371-3418	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4012-4059	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4113-4160	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208980-209027	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3370-3417	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4011-4058	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4112-4159	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219474-219521	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3370-3417	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4011-4058	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4112-4159	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210308-210355	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3370-3417	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4011-4058	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4112-4159	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191263-191310	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	270-317	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	101195-101242	12	0.75
NZ_CP018979_1	1.1\|3728311\|48\|NZ_CP018979\|CRISPRCasFinder	3728311-3728358	48	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	158-205	13	0.729

1. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 8, identity: 0.833

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccgaac	Protospacer
.* .********************* ****************   *.*

2. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.833

aaaccgtaggcctgataagacgcgcaagcgtcg-catcaggcaaacagc	CRISPR spacer
aacctgtaggcctgataagacgcgcaagcgtcgccatcaggcatctca-	Protospacer
** *.**************************** *********  . .

3. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  ..****** ************* ****************  *.**

4. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  ..****** ************* ****************  *.**

5. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
attttgtaggcctgataagacgcggcagcgtcgcatcaggcatcgtgc	Protospacer
*  ..*******************  ****************    **

6. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

7. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

8. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

9. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

10. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

11. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

12. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctggt	Protospacer
.. .******* ************* ****************  ..*.

13. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

14. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

15. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

16. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

17. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

18. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

19. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
cggctgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
 ..*.*******************  ****************   * .

20. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

21. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

22. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

23. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

24. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

25. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

26. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

27. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

28. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

29. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

30. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

31. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

32. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

33. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

34. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

35. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

36. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggtttgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
.. ..*******************  ****************   * .

37. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
taatacaaggcctgataagacgcgccagcgtcgcatcaggcgctgaat	Protospacer
 **.   ****************** ***************.   *..

38. spacer 1.1|3728311|48|NZ_CP018979|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 13, identity: 0.729

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gtctngtaggcctgataagacgcgtcagcgtcgcatcaggcttcaatt	Protospacer
.  . *******************. ***************    * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

766 : 40904

Burkholderia_virus(41.03%)

head,tail,transposase,integrase,plate

attL 24816:24831|attR 33353:33368

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000859116.1\|766_1114_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	1.7e-34	61.5
WP_000148265.1\|1168_1765_-\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	5.4e-36	45.2
WP_001529032.1\|1761_2934_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	7.3e-85	47.1
WP_012602373.1\|2921_3137_-	membrane protein	Q6QIA3	Burkholderia_phage	1.2e-17	57.1
WP_000458387.1\|3133_4018_-\|tail	phage tail protein	A4JWL1	Burkholderia_virus	6.8e-51	47.9
WP_078214764.1\|4017_7230_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	9.9e-84	31.3
WP_001202894.1\|7305_7464_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_000084213.1\|7387_7723_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000110114.1\|7820_8102_-	hypothetical protein	NA	NA	NA	NA
WP_000034294.1\|8104_8626_-\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.8e-67	67.6
WP_000729834.1\|8625_10053_-\|tail	tail protein	A4JWK5	Burkholderia_virus	4.5e-214	76.3
WP_012602372.1\|10042_10297_-	hypothetical protein	NA	NA	NA	NA
WP_021539012.1\|10293_10758_-	hypothetical protein	Q6QIB2	Burkholderia_phage	1.3e-37	51.0
WP_000271668.1\|10757_11204_-	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	2.2e-34	52.3
WP_000537457.1\|11205_11544_-	DUF2190 family protein	NA	NA	NA	NA
WP_001286908.1\|11553_12507_-	hypothetical protein	A4JWK0	Burkholderia_virus	3.4e-64	43.8
WP_001273074.1\|12521_13637_-	hypothetical protein	A4JWJ9	Burkholderia_virus	9.4e-98	51.6
WP_000135514.1\|13851_14310_-	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	2.6e-30	44.8
WP_000117556.1\|14312_15134_-\|head	phage head morphogenesis protein	A4JWJ6	Burkholderia_virus	3.1e-98	61.5
WP_042069474.1\|15114_16611_-	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	4.4e-167	59.4
WP_000137893.1\|16610_18134_-	hypothetical protein	A4JWJ4	Burkholderia_virus	1.8e-184	62.5
WP_000533684.1\|18130_18673_-	DUF3486 family protein	A4JWJ3	Burkholderia_virus	4.9e-44	53.3
WP_000227704.1\|18675_18987_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	4.0e-30	60.6
WP_000175097.1\|18986_19313_-	membrane protein	Q6QIC4	Burkholderia_phage	9.6e-19	49.5
WP_001299256.1\|19309_19921_-	hypothetical protein	A0A0S4L1H0	Pseudomonas_phage	6.9e-10	34.2
WP_001104438.1\|19949_20687_-	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.9e-63	59.5
WP_000793145.1\|20689_21040_-	membrane protein	A4JWP3	Burkholderia_virus	9.0e-23	53.9
WP_000194949.1\|21170_21914_+	hypothetical protein	NA	NA	NA	NA
WP_000972292.1\|21889_22294_-	hypothetical protein	NA	NA	NA	NA
WP_001069609.1\|22292_22508_+	hypothetical protein	NA	NA	NA	NA
WP_001573937.1\|22699_23464_+	DNA adenine methylase	A2I2Y7	Vibrio_virus	4.0e-100	64.4
WP_000579778.1\|23580_23919_-	helix-turn-helix domain-containing protein	F6MII3	Haemophilus_phage	4.8e-05	34.4
WP_000123378.1\|24019_24208_+	DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	3.9e-17	71.0
WP_000047758.1\|24260_24569_+	helix-turn-helix domain-containing protein	Q5ZR02	Pseudomonas_phage	3.5e-23	55.9
WP_000533819.1\|24579_25491_+	hypothetical protein	A4JWN3	Burkholderia_virus	2.0e-74	55.3
24816:24831	attL	NA	NA	NA	NA
WP_059218002.1\|25494_27264_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	6.2e-229	68.3
WP_000960680.1\|27274_28441_+	AAA family ATPase	A4JWN1	Burkholderia_virus	9.7e-122	59.7
WP_000843446.1\|28443_28713_+	hypothetical protein	NA	NA	NA	NA
WP_001381528.1\|28740_29271_+	bacteriophage Mu Gam like family protein	L7P7T1	Pseudomonas_phage	1.2e-58	66.7
WP_042203510.1\|29559_29832_+	hypothetical protein	NA	NA	NA	NA
WP_000197789.1\|29841_30147_+	hypothetical protein	NA	NA	NA	NA
WP_000131939.1\|30143_30827_+	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	4.5e-34	36.9
WP_000631814.1\|30823_31054_+	hypothetical protein	NA	NA	NA	NA
WP_000123379.1\|31043_31259_+	hypothetical protein	NA	NA	NA	NA
WP_000988473.1\|31248_31701_+	regulatory protein GemA	A4JWM5	Burkholderia_virus	1.6e-24	46.6
WP_001281696.1\|31672_32071_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	3.9e-30	55.9
WP_001571573.1\|32185_32818_+	hypothetical protein	NA	NA	NA	NA
WP_001542273.1\|33924_34338_+	hypothetical protein	NA	NA	NA	NA
33353:33368	attR	NA	NA	NA	NA
WP_001298859.1\|34452_35994_+\|transposase	IS21-like element ISEc12 family transposase	K4I413	Acidithiobacillus_phage	1.7e-129	46.4
WP_001016257.1\|36008_36755_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
WP_000846703.1\|37203_37614_+	hypothetical protein	NA	NA	NA	NA
WP_001542275.1\|37834_38653_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	8.8e-45	38.6
WP_001164966.1\|38652_38898_+	hypothetical protein	NA	NA	NA	NA
WP_001542276.1\|38991_39465_+	antirestriction protein	A0A2D0W9W4	Bordetella_phage	4.3e-12	33.1
WP_001186200.1\|39480_39957_+	RadC family protein	NA	NA	NA	NA
WP_000692345.1\|40019_40241_+	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
WP_000086752.1\|40259_40904_+	hypothetical protein	A0A2I6PI07	Pseudomonas_phage	1.8e-24	32.9

DBSCAN-SWA_2

71707 : 78010

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001100793.1\|71707_72250_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.0e-50	61.8
WP_000857525.1\|72254_73133_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.6e-107	64.5
WP_001023641.1\|73190_74090_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	1.7e-28	34.8
WP_000699407.1\|74089_75175_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	8.8e-101	53.9
WP_000183040.1\|75547_76441_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	3.0e-46	42.0
WP_001116066.1\|76615_78010_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	6.3e-19	33.0

DBSCAN-SWA_3

124728 : 164986

Escherichia_phage(44.44%)

lysis,terminase,head,tail,plate,portal,holin,integrase,tRNA,capsid

attL 128325:128343|attR 172114:172132

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000675176.1\|124728_126132_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	7.0e-34	29.8
WP_000137877.1\|126128_126851_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	3.7e-31	33.6
WP_000929408.1\|127030_127363_+	YegP family protein	NA	NA	NA	NA
WP_000476014.1\|127509_128871_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.9e-217	99.7
128325:128343	attL	NA	NA	NA	NA
WP_000468308.1\|129143_129362_-	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_000887625.1\|129443_130607_-	phage late control D family protein	A0A0F7LDZ2	Escherichia_phage	1.2e-204	99.0
WP_000978916.1\|130606_131086_-\|tail	phage tail protein	Q7Y4C7	Escherichia_virus	2.5e-84	98.7
WP_001600133.1\|131100_133548_-\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	99.1
WP_000785970.1\|133540_133660_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_001599803.1\|133692_133968_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	6.3e-40	97.8
WP_001251408.1\|134024_134543_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_001286716.1\|134555_135746_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	1.6e-225	100.0
WP_023908562.1\|135824_135992_+	hypothetical protein	NA	NA	NA	NA
WP_001599801.1\|136180_137260_-	hypothetical protein	NA	NA	NA	NA
WP_001516655.1\|137588_138167_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.8e-68	65.4
WP_001599800.1\|138166_140785_-\|tail	phage tail protein	Q858V4	Yersinia_virus	3.4e-284	73.0
WP_001285323.1\|140795_141326_-\|tail	phage tail protein I	Q858V5	Yersinia_virus	1.3e-102	99.4
WP_001121473.1\|141318_142227_-\|plate	baseplate assembly protein	A0A0F7LCJ3	Escherichia_phage	2.6e-162	99.7
WP_000127164.1\|142231_142579_-\|plate	baseplate assembly protein	A0A0F7LDQ1	Escherichia_phage	1.3e-58	100.0
WP_001599799.1\|142575_143211_-\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	2.6e-113	98.6
WP_001599798.1\|143294_144080_+	hypothetical protein	NA	NA	NA	NA
WP_001599797.1\|144151_144604_-	phage virion morphogenesis protein	A0A0F7LDR6	Escherichia_phage	1.3e-74	97.3
WP_001599796.1\|144596_145064_-\|tail	phage tail protein	U5N0S7	Enterobacteria_phage	9.7e-81	98.1
WP_001300730.1\|145026_145200_-	hypothetical protein	Q7Y4E1	Escherichia_virus	5.2e-24	94.7
WP_023908563.1\|145171_145597_-\|lysis	LysB family phage lysis regulatory protein	A0A0F7L9Y0	Escherichia_phage	4.0e-65	95.0
WP_001605748.1\|145584_146010_-	hypothetical protein	U5N096	Enterobacteria_phage	1.7e-60	98.6
WP_001144101.1\|146024_146522_-	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
WP_000123123.1\|146521_146803_-\|holin	holin	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
WP_000846409.1\|146806_147010_-\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
WP_000988633.1\|147009_147519_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
WP_000203428.1\|147618_148362_-\|terminase	terminase endonuclease subunit	Q858W5	Yersinia_virus	2.7e-125	98.8
WP_032179100.1\|148365_149439_-\|capsid	phage major capsid protein, P2 family	Q94MI3	Enterobacteria_phage	1.6e-200	99.2
WP_001601069.1\|149497_150352_-\|capsid	GPO family capsid scaffolding protein	Q94MB7	Escherichia_virus	2.7e-137	88.0
WP_000156861.1\|150525_152298_+\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.8
WP_001600135.1\|152297_153332_+\|portal	phage portal protein	Q858W8	Yersinia_virus	3.9e-199	98.8
WP_032179103.1\|153750_154692_+	hypothetical protein	Q2P9W7	Enterobacteria_phage	2.7e-146	81.2
WP_072164333.1\|154764_154917_-	meiotically up-regulated 80 protein	Q2P9X3	Enterobacteria_phage	1.7e-18	89.8
WP_023136039.1\|155011_155692_-	hypothetical protein	Q2P9W8	Enterobacteria_phage	4.6e-124	99.1
WP_077250945.1\|155719_155941_-	DUF2158 domain-containing protein	Q2P9W9	Enterobacteria_phage	2.9e-35	98.6
WP_032179106.1\|156037_158323_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	98.7
WP_001541416.1\|159324_159606_-	hypothetical protein	S4TP00	Salmonella_phage	3.6e-30	71.4
WP_001113270.1\|159602_159827_-	TraR/DksA family transcriptional regulator	A0A0F7LDI3	Escherichia_phage	3.8e-35	98.6
WP_001277957.1\|159826_160129_-	hypothetical protein	A0A0F7LDT6	Escherichia_phage	2.2e-46	99.0
WP_000557703.1\|160128_160353_-	DUF2732 family protein	S4TP68	Salmonella_phage	4.7e-33	100.0
WP_000217677.1\|160416_160917_-	hypothetical protein	A0A0F7LBQ6	Escherichia_phage	4.5e-92	100.0
WP_001081582.1\|161094_161370_-	hypothetical protein	Q1JS60	Enterobacteria_phage	1.3e-48	100.0
WP_000020919.1\|161491_161791_+	helix-turn-helix domain-containing protein	Q1JS61	Enterobacteria_phage	2.4e-48	100.0
WP_000985261.1\|161906_162920_+\|integrase	site-specific integrase	Q83VS6	Escherichia_phage	4.1e-193	99.1
WP_001531820.1\|163354_163672_-	hypothetical protein	NA	NA	NA	NA
WP_000807341.1\|164086_164986_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	5.7e-13	29.5
172114:172132	attR	NA	NA	NA	NA

DBSCAN-SWA_4

206170 : 215615

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001292786.1\|206170_207307_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	6.1e-161	96.7
WP_001296230.1\|207303_209307_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
WP_001296231.1\|209431_209893_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
WP_001295430.1\|209933_210404_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_000598641.1\|210450_211170_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|211166_212852_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240408.1\|213073_213805_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	6.3e-111	98.5
WP_001216963.1\|213864_213972_+	protein YohO	NA	NA	NA	NA
WP_000783109.1\|213952_214684_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569347.1\|214688_215615_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.3e-23	30.8

DBSCAN-SWA_5

792163 : 799303

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000103863.1\|792163_794725_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8
WP_001141293.1\|794830_795487_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	3.3e-50	46.1
WP_001296319.1\|795537_796305_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	9.7e-70	57.4
WP_000847996.1\|796500_797409_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.9e-117	76.2
WP_000590411.1\|797405_798668_+	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
WP_001279004.1\|798664_799303_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	74.5

DBSCAN-SWA_6

1057525 : 1121234

Escherichia_phage(28.57%)

transposase,integrase,tRNA,protease

attL 1049781:1049798|attR 1110059:1110076

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1049781:1049798	attL	NA	NA	NA	NA
WP_001296359.1\|1057525_1058023_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_000286500.1\|1058117_1058825_+	deoxyribonuclease I	NA	NA	NA	NA
WP_001222509.1\|1058904_1059636_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_000593274.1\|1059648_1060599_+	glutathione synthase	NA	NA	NA	NA
WP_001053178.1\|1060707_1061271_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017111.1\|1061270_1061687_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_001296360.1\|1061801_1062782_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997795.1\|1062799_1063504_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094831.1\|1063521_1064088_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_001277229.1\|1064084_1064375_+	YggU family protein	NA	NA	NA	NA
WP_001174754.1\|1064382_1064976_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_000239963.1\|1064968_1066105_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_000783999.1\|1066419_1067406_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_000577034.1\|1067450_1067954_+	TRAP transporter small permease	NA	NA	NA	NA
WP_000378955.1\|1067953_1069255_+	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_000745240.1\|1069310_1070318_-	DUF1202 family protein	NA	NA	NA	NA
WP_000394132.1\|1070434_1071481_-	L-asparaginase 2	NA	NA	NA	NA
WP_000984796.1\|1071656_1072376_-	DUF2884 domain-containing protein	NA	NA	NA	NA
WP_001296361.1\|1072396_1072537_-	hypothetical protein	NA	NA	NA	NA
WP_001107566.1\|1072559_1072886_-	YggL family protein	NA	NA	NA	NA
WP_000786911.1\|1072885_1073605_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001296362.1\|1073765_1074818_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091700.1\|1074845_1075121_+	oxidative damage protection protein	NA	NA	NA	NA
WP_000760323.1\|1075185_1076265_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001296363.1\|1076466_1077723_+	nucleoside permease	NA	NA	NA	NA
WP_000839781.1\|1077771_1079907_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234526.1\|1080299_1081007_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218869.1\|1081385_1082651_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.1e-77	38.1
WP_000147017.1\|1082906_1083950_+	hypothetical protein	NA	NA	NA	NA
WP_001774069.1\|1085643_1086195_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000006213.1\|1088686_1088920_+	Major pilus subunit operon regulatory protein	NA	NA	NA	NA
WP_023146305.1\|1089386_1089602_+	hypothetical protein	A0A0N7C1Y0	Escherichia_phage	1.7e-27	85.2
WP_099156432.1\|1089570_1090697_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.5e-146	96.6
WP_001513409.1\|1090787_1090901_-	hypothetical protein	NA	NA	NA	NA
WP_001110186.1\|1092734_1092995_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_000109147.1\|1093036_1093597_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001296373.1\|1093636_1094065_+	DUF417 family protein	NA	NA	NA	NA
WP_000074472.1\|1094782_1095976_-	MFS transporter	NA	NA	NA	NA
WP_001296374.1\|1096111_1097836_+	aerobactin synthase IucA	NA	NA	NA	NA
WP_001287500.1\|1097836_1098784_+	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_001015715.1\|1098783_1100526_+	aerobactin synthase IucC	NA	NA	NA	NA
WP_000750130.1\|1100522_1101800_+	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_000973516.1\|1101881_1104083_+	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_001034083.1\|1105026_1108914_+\|protease	serine protease autotransporter toxin Sat	Q9LA58	Enterobacterial_phage	1.2e-227	39.0
WP_001254932.1\|1109510_1110662_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
1110059:1110076	attR	NA	NA	NA	NA
WP_000266542.1\|1115442_1115658_-	hypothetical protein	NA	NA	NA	NA
WP_001296382.1\|1115661_1116021_-	hypothetical protein	NA	NA	NA	NA
WP_001305021.1\|1116311_1116584_-	hypothetical protein	NA	NA	NA	NA
WP_001223344.1\|1117415_1119506_-	bifunctional siderophore receptor/adhesin Iha	A0A0P0I887	Acinetobacter_phage	2.6e-08	31.5
WP_096928816.1\|1120005_1121234_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	7.2e-168	94.4

DBSCAN-SWA_7

2179013 : 2254636

Escherichia_phage(58.7%)

lysis,terminase,head,tail,plate,portal,protease,holin,integrase,tRNA,capsid

attL 2208086:2208132|attR 2238656:2238702

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000560981.1\|2179013_2179451_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_001297068.1\|2179495_2180437_+	fatty acid biosynthesis protein FabY	NA	NA	NA	NA
WP_001385591.1\|2180500_2181409_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_000897302.1\|2181637_2181949_+	hypothetical protein	NA	NA	NA	NA
WP_000356397.1\|2181949_2182240_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001296612.1\|2182598_2182877_+	hypothetical protein	NA	NA	NA	NA
WP_001251293.1\|2183273_2183492_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_032140890.1\|2183676_2184126_-	hypothetical protein	NA	NA	NA	NA
WP_001038650.1\|2184441_2185290_-	hypothetical protein	NA	NA	NA	NA
WP_001068514.1\|2185579_2185822_+	hypothetical protein	NA	NA	NA	NA
WP_000027696.1\|2186003_2186933_-	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA
WP_000829013.1\|2186929_2187565_-	formate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA
WP_000331383.1\|2187561_2188464_-	formate dehydrogenase subunit beta	NA	NA	NA	NA
WP_077633686.1\|2188476_2191527_-	formate dehydrogenase-N subunit alpha	A0A077SK27	Escherichia_phage	1.1e-07	23.8
WP_000753589.1\|2191720_2192554_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_000749934.1\|2193549_2194944_+	glycoporin	NA	NA	NA	NA
WP_000619499.1\|2194984_2195299_-	L-rhamnose mutarotase	NA	NA	NA	NA
WP_001179746.1\|2195308_2196133_-	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA
WP_001296617.1\|2196399_2197659_-	L-rhamnose isomerase	NA	NA	NA	NA
WP_000144100.1\|2197655_2199125_-	rhamnulokinase	NA	NA	NA	NA
WP_000217147.1\|2199412_2200249_+	HTH-type transcriptional activator RhaS	NA	NA	NA	NA
WP_001296618.1\|2200232_2201171_+	HTH-type transcriptional activator RhaR	NA	NA	NA	NA
WP_000063507.1\|2201167_2202202_-	L-rhamnose/proton symporter RhaT	NA	NA	NA	NA
WP_001296619.1\|2202486_2203107_+	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	5.4e-63	58.9
WP_001166063.1\|2203366_2204350_+	2-keto-3-deoxygluconate transporter	NA	NA	NA	NA
WP_001270242.1\|2204498_2205173_+	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_000580417.1\|2205343_2206717_-	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	3.8e-16	25.9
WP_001033720.1\|2206713_2207412_-	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
WP_001223800.1\|2207561_2208062_+	cell-envelope stress modulator CpxP	NA	NA	NA	NA
2208086:2208132	attL	NA	NA	NA	NA
WP_000985243.1\|2208248_2209229_-\|integrase	tyrosine-type recombinase/integrase	S4TP66	Salmonella_phage	1.0e-185	99.7
WP_000777028.1\|2209298_2209592_-	helix-turn-helix transcriptional regulator	Q1JS37	Enterobacteria_phage	4.7e-49	99.0
WP_001308179.1\|2209728_2210001_+	hypothetical protein	Q1JS36	Enterobacteria_phage	1.4e-47	100.0
WP_000217670.1\|2210170_2210671_+	hypothetical protein	M1SV55	Escherichia_phage	2.6e-92	100.0
WP_078214771.1\|2210734_2210959_+	DUF2732 family protein	S4TP68	Salmonella_phage	1.0e-32	98.6
WP_001277952.1\|2210958_2211261_+	hypothetical protein	A0A0F7LDT6	Escherichia_phage	2.5e-45	96.0
WP_001113270.1\|2211260_2211485_+	TraR/DksA family transcriptional regulator	A0A0F7LDI3	Escherichia_phage	3.8e-35	98.6
WP_000027664.1\|2211481_2211757_+	hypothetical protein	U5N3W1	Enterobacteria_phage	3.8e-45	100.0
WP_078214772.1\|2211746_2214023_+	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	97.6
WP_001774096.1\|2214201_2214753_+	3'-5' exoribonuclease	D4HTX2	Vibrio_phage	7.0e-38	47.0
WP_001774097.1\|2214846_2216406_+	hypothetical protein	NA	NA	NA	NA
WP_000038159.1\|2216759_2217794_-\|portal	phage portal protein	M1SV64	Escherichia_phage	2.1e-200	99.4
WP_000156847.1\|2217793_2219566_-\|terminase	terminase ATPase subunit family protein	A0A0F7LCM8	Escherichia_phage	0.0e+00	100.0
WP_078214773.1\|2219739_2220594_+\|capsid	GPO family capsid scaffolding protein	Q94MB7	Escherichia_virus	7.1e-138	88.4
WP_001530537.1\|2220652_2221726_+\|capsid	phage major capsid protein, P2 family	Q94MK7	Enterobacteria_phage	1.1e-201	99.4
WP_078214774.1\|2221729_2222467_+\|terminase	terminase endonuclease subunit	Q94MJ2	Enterobacteria_phage	1.6e-130	99.6
WP_000988633.1\|2222566_2223076_+\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
WP_000846409.1\|2223075_2223279_+\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
WP_000123123.1\|2223282_2223564_+\|holin	holin	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
WP_001144101.1\|2223563_2224061_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
WP_078214775.1\|2224075_2224501_+	protein lysA	A0A0F7LBP4	Escherichia_phage	1.0e-57	93.6
WP_078214776.1\|2224488_2224914_+\|lysis	LysB family phage lysis regulatory protein	U5N3W5	Enterobacteria_phage	9.4e-67	97.2
WP_001119522.1\|2224900_2225059_+	hypothetical protein	A0A0F7LCN5	Escherichia_phage	2.6e-22	100.0
WP_000917169.1\|2225021_2225489_+\|tail	phage tail protein	Q7Y4E0	Escherichia_virus	1.9e-81	98.7
WP_001001780.1\|2225481_2225934_+	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	6.3e-77	100.0
WP_001297867.1\|2226000_2226636_+\|plate	phage baseplate assembly protein V	Q858V7	Yersinia_virus	5.9e-113	98.1
WP_032277167.1\|2226632_2226980_+\|plate	baseplate assembly protein	A0A0F7L9X3	Escherichia_phage	8.5e-58	99.1
WP_001121474.1\|2226984_2227893_+\|plate	baseplate assembly protein	A0A0F7LCJ3	Escherichia_phage	1.2e-162	100.0
WP_001285340.1\|2227885_2228497_+\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	1.7e-117	100.0
WP_078214777.1\|2228493_2229828_+\|tail	phage tail protein	M1TAS6	Escherichia_phage	1.3e-175	67.8
WP_040072409.1\|2229827_2230430_+\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	6.6e-98	89.4
WP_021546685.1\|2230401_2230842_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	4.7e-53	69.7
WP_143370061.1\|2230868_2231258_-	hypothetical protein	F1BUP1	Erwinia_phage	4.7e-12	43.8
WP_000905101.1\|2231288_2231882_+	recombinase family protein	A0A0F7LA37	Escherichia_phage	2.7e-104	97.5
WP_001286716.1\|2231941_2233132_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	1.6e-225	100.0
WP_001251408.1\|2233144_2233663_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_001031307.1\|2233719_2233995_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.2e-40	98.9
WP_000785970.1\|2234027_2234147_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_046617802.1\|2234139_2236587_+\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	95.8
WP_000978896.1\|2236601_2237081_+\|tail	phage tail protein	A0A0F7LDE8	Escherichia_phage	6.6e-85	100.0
WP_000882963.1\|2237080_2238244_+	phage late control D family protein	U5N3V4	Enterobacteria_phage	2.4e-205	99.7
WP_000468308.1\|2238325_2238544_+	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_001076748.1\|2238780_2239683_+	CDF family cation-efflux transporter FieF	NA	NA	NA	NA
2238656:2238702	attR	NA	NA	NA	NA
WP_000591795.1\|2239863_2240826_+	6-phosphofructokinase	NA	NA	NA	NA
WP_000758732.1\|2241145_2242135_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001296622.1\|2242241_2242997_+	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA
WP_001216325.1\|2243051_2243819_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_000802235.1\|2243926_2244526_-	YiiQ family protein	NA	NA	NA	NA
WP_000155252.1\|2244626_2245067_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_000655986.1\|2245278_2245578_+	DUF406 domain-containing protein	NA	NA	NA	NA
WP_000323555.1\|2245604_2246033_+	universal stress protein UspD	NA	NA	NA	NA
WP_000796342.1\|2246037_2246784_-	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_001250644.1\|2246880_2247891_-	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_000136804.1\|2248061_2249570_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_000084268.1\|2249592_2250438_-	glycerol uptake facilitator protein GlpF	M1HWZ0	Paramecium_bursaria_Chlorella_virus	4.4e-15	28.0
WP_001296623.1\|2250862_2251108_+	septal ring assembly protein ZapB	NA	NA	NA	NA
WP_000872908.1\|2251192_2251678_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_001305044.1\|2251770_2252697_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_000208242.1\|2254105_2254636_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA

DBSCAN-SWA_8

3891631 : 4001423

131

Enterobacteria_phage(43.75%)

terminase,head,tail,plate,protease,portal,holin,transposase,integrase,tRNA,capsid

attL 3987021:3987036|attR 4006342:4006357

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000520781.1\|3891631_3891952_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
WP_000934041.1\|3891982_3894259_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
WP_001040187.1\|3894943_3895162_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_001241674.1\|3895446_3896151_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001202204.1\|3896192_3897914_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	1.4e-20	25.0
WP_001043561.1\|3897914_3899681_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	4.1e-23	24.3
WP_001385255.1\|3899803_3900769_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.9e-62	44.6
WP_000228473.1\|3901312_3901807_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_000077041.1\|3901941_3906048_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
WP_001295343.1\|3906206_3906818_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_000067797.1\|3906828_3908172_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	2.1e-80	40.8
WP_000886683.1\|3908262_3909555_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
WP_000078916.1\|3909860_3910001_-	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	1.5e-18	97.8
WP_000488106.1\|3910192_3910453_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_000132830.1\|3910493_3911603_-	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	1.3e-195	94.9
WP_000005447.1\|3911760_3912945_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	8.4e-222	97.5
WP_000290462.1\|3912944_3913457_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	1.5e-90	97.1
WP_000651577.1\|3913512_3913887_+\|tail	tail protein	A0A0A7NPZ0	Enterobacteria_phage	9.9e-36	71.5
WP_000333503.1\|3913895_3914051_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	9.7e-22	96.1
WP_000853410.1\|3914037_3916845_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	90.1
WP_000979945.1\|3916857_3917346_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.4e-85	99.4
WP_000905061.1\|3917374_3917974_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	3.8e-98	98.9
WP_032142265.1\|3918192_3918750_+	hypothetical protein	A0A0A7NPY7	Enterobacteria_phage	5.0e-84	88.5
WP_000972134.1\|3918752_3919286_+\|tail	tail fiber assembly protein	C9DGR0	Escherichia_phage	4.2e-96	98.9
WP_001554335.1\|3919314_3919842_-\|tail	tail fiber assembly protein	A0A0C4UR05	Shigella_phage	2.6e-90	93.7
WP_032140708.1\|3919843_3922066_-\|tail	phage tail protein	A0A0A7NV63	Enterobacteria_phage	3.8e-183	65.0
WP_000071703.1\|3922068_3922599_-\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	3.6e-92	98.2
WP_001111954.1\|3922591_3923488_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	3.3e-154	97.7
WP_000213444.1\|3923491_3923842_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	3.5e-59	99.1
WP_001271941.1\|3923838_3924420_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	3.3e-102	98.4
WP_000356366.1\|3924416_3925052_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	4.1e-114	99.5
WP_000921127.1\|3925044_3925512_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	3.5e-83	95.5
WP_000202148.1\|3925535_3927413_-	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	2.7e-299	80.2
WP_000780577.1\|3927551_3927947_-	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	1.0e-59	93.3
WP_000072341.1\|3927943_3928336_-	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	1.9e-69	96.9
WP_001342221.1\|3928332_3928656_-\|holin	holin	A0A0A7NRY9	Enterobacteria_phage	1.7e-47	93.5
WP_000864901.1\|3928658_3928859_-\|tail	tail protein	A0A0A7NV57	Enterobacteria_phage	3.5e-32	100.0
WP_000063100.1\|3928858_3929353_-\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	1.9e-87	97.0
WP_000632309.1\|3929454_3930255_-\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	6.9e-127	89.1
WP_001055083.1\|3930300_3931353_-\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	1.4e-188	94.3
WP_001262655.1\|3931376_3932213_-\|capsid	phage capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	2.7e-150	99.6
WP_000613780.1\|3932367_3934119_+\|terminase	terminase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.8
WP_000087814.1\|3934118_3935165_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	2.2e-202	99.7
WP_000236495.1\|3935179_3935704_-	hypothetical protein	NA	NA	NA	NA
WP_001068329.1\|3936427_3936925_+	DUF4760 domain-containing protein	NA	NA	NA	NA
WP_000193205.1\|3936964_3937807_+	hypothetical protein	NA	NA	NA	NA
WP_000211282.1\|3937890_3938205_-	plasmid partition protein	A0A0A7NPT5	Enterobacteria_phage	4.1e-19	52.3
WP_000686485.1\|3938209_3939169_-	recombinase	A0A0A7NPX4	Enterobacteria_phage	4.2e-179	99.1
WP_000123489.1\|3939245_3942068_-	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	98.4
WP_000599382.1\|3942074_3942440_-	hypothetical protein	A0A0A7NRY1	Enterobacteria_phage	1.7e-61	97.5
WP_000013455.1\|3942512_3942743_-	hypothetical protein	A0A0A7NV48	Enterobacteria_phage	9.1e-32	97.4
WP_000104290.1\|3943065_3943365_-	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	2.4e-40	88.9
WP_000153700.1\|3943361_3943628_-	winged helix-turn-helix transcriptional regulator	A0A0A7NV47	Enterobacteria_phage	2.0e-30	75.9
WP_000985157.1\|3943624_3943828_-	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	2.5e-25	83.6
WP_000543036.1\|3943851_3944262_-	hypothetical protein	NA	NA	NA	NA
WP_000021715.1\|3944355_3944469_-	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	1.8e-09	89.2
WP_000514277.1\|3944465_3944708_-	DUF4754 domain-containing protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
WP_000159455.1\|3944719_3944998_-	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	3.1e-34	79.3
WP_000776267.1\|3945008_3945359_-	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	8.1e-56	93.1
WP_001287828.1\|3945496_3945688_+	hypothetical protein	NA	NA	NA	NA
WP_000856387.1\|3945694_3946117_-	hypothetical protein	NA	NA	NA	NA
WP_001204236.1\|3946121_3946643_-	transcriptional regulator	NA	NA	NA	NA
WP_001368591.1\|3946747_3947089_+	helix-turn-helix transcriptional regulator	Q1JS45	Enterobacteria_phage	4.7e-16	51.2
WP_000023739.1\|3947158_3948151_+\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	1.3e-103	56.2
WP_000850306.1\|3948450_3950895_+	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	6.6e-221	49.8
WP_000213098.1\|3950905_3951523_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.0e-77	60.6
WP_000534666.1\|3951524_3952388_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_000165876.1\|3952423_3953050_-	hydrolase	NA	NA	NA	NA
WP_000109283.1\|3953363_3954512_+	MFS transporter	NA	NA	NA	NA
WP_000111043.1\|3954608_3955349_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	8.0e-21	26.5
WP_001292822.1\|3955540_3957823_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-162	41.5
WP_001295917.1\|3957877_3958735_-	formate transporter FocA	NA	NA	NA	NA
WP_000194832.1\|3959140_3960901_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_000642852.1\|3961030_3961723_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_000057158.1\|3961921_3963010_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	2.7e-81	46.8
WP_000445240.1\|3963080_3964364_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_000904922.1\|3964619_3965192_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.6e-85	85.2
WP_063269479.1\|3965251_3965776_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	1.8e-35	48.6
WP_000072165.1\|3965775_3966390_+\|tail	tail assembly protein	Q9MCR5	Enterobacteria_phage	2.5e-60	60.5
WP_023142129.1\|3966396_3966858_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	3.9e-34	50.0
WP_023363137.1\|3966868_3968116_-\|tail	tail protein	A0A0K2FIZ6	Escherichia_phage	2.0e-40	43.7
WP_000138756.1\|3968118_3968697_-\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	1.7e-66	66.8
WP_001219098.1\|3968689_3969793_-\|plate	baseplate protein	Q6QI99	Burkholderia_phage	1.4e-106	55.2
WP_000859111.1\|3969783_3970131_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	5.9e-35	62.4
WP_000148266.1\|3970185_3970782_-\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	3.2e-36	45.2
WP_000808007.1\|3970778_3971933_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	1.9e-85	47.6
WP_012602373.1\|3971920_3972136_-	membrane protein	Q6QIA3	Burkholderia_phage	1.2e-17	57.1
WP_000458387.1\|3972132_3973017_-\|tail	phage tail protein	A4JWL1	Burkholderia_virus	6.8e-51	47.9
WP_000016538.1\|3973016_3975968_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	9.8e-86	29.9
WP_001202894.1\|3976043_3976202_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_000084213.1\|3976125_3976461_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000110114.1\|3976558_3976840_-	hypothetical protein	NA	NA	NA	NA
WP_000034294.1\|3976842_3977364_-\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.8e-67	67.6
WP_000729834.1\|3977363_3978791_-\|tail	tail protein	A4JWK5	Burkholderia_virus	4.5e-214	76.3
WP_012602372.1\|3978780_3979035_-	hypothetical protein	NA	NA	NA	NA
WP_001101804.1\|3979031_3979496_-	hypothetical protein	Q6QIB2	Burkholderia_phage	9.1e-39	51.7
WP_000271668.1\|3979495_3979942_-	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	2.2e-34	52.3
WP_000537457.1\|3979943_3980282_-	DUF2190 family protein	NA	NA	NA	NA
WP_001286908.1\|3980291_3981245_-	hypothetical protein	A4JWK0	Burkholderia_virus	3.4e-64	43.8
WP_001273074.1\|3981259_3982375_-	hypothetical protein	A4JWJ9	Burkholderia_virus	9.4e-98	51.6
WP_000135514.1\|3982589_3983048_-	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	2.6e-30	44.8
WP_000117548.1\|3983050_3983872_-\|head	phage head morphogenesis protein	A4JWJ6	Burkholderia_virus	1.8e-98	61.9
WP_000090684.1\|3983852_3985349_-	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	9.7e-167	59.0
WP_000167500.1\|3985348_3986944_-	hypothetical protein	A4JWJ4	Burkholderia_virus	6.5e-185	62.8
WP_000124060.1\|3986940_3987486_-	DUF3486 family protein	A4JWJ3	Burkholderia_virus	9.3e-59	67.6
3987021:3987036	attL	NA	NA	NA	NA
WP_000227701.1\|3987485_3987797_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	9.4e-32	62.6
WP_000175099.1\|3987796_3988123_-	hypothetical protein	Q6QIC4	Burkholderia_phage	1.1e-17	48.6
WP_000264665.1\|3988119_3988770_-	hypothetical protein	J9SVN7	Pseudomonas_phage	2.8e-09	32.9
WP_001104440.1\|3988753_3989494_-	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-62	51.4
WP_000793146.1\|3989496_3989847_-	membrane protein	A4JWP3	Burkholderia_virus	1.5e-22	53.0
WP_000194951.1\|3989977_3990706_+	hypothetical protein	NA	NA	NA	NA
WP_000972294.1\|3990681_3991086_-	hypothetical protein	NA	NA	NA	NA
WP_001069611.1\|3991084_3991300_+	hypothetical protein	NA	NA	NA	NA
WP_000783854.1\|3991490_3992255_+	DNA adenine methylase	A2I2Y7	Vibrio_virus	5.2e-100	64.4
WP_000031013.1\|3992371_3992728_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000123378.1\|3992821_3993010_+	DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	3.9e-17	71.0
WP_000047759.1\|3993062_3993371_+	helix-turn-helix domain-containing protein	Q5ZR02	Pseudomonas_phage	2.7e-23	55.9
WP_000533817.1\|3993381_3994302_+	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	1.6e-74	56.2
WP_001095645.1\|3994301_3994619_+	hypothetical protein	NA	NA	NA	NA
WP_000186588.1\|3994634_3996404_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A4JWN2	Burkholderia_virus	1.5e-227	69.4
WP_000960679.1\|3996414_3997581_+	AAA family ATPase	A4JWN1	Burkholderia_virus	2.2e-121	59.4
WP_000843446.1\|3997583_3997853_+	hypothetical protein	NA	NA	NA	NA
WP_001140136.1\|3997880_3998411_+	host-nuclease inhibitor protein Gam	L7P7T1	Pseudomonas_phage	1.2e-58	66.7
WP_000632576.1\|3998699_3998972_+	hypothetical protein	NA	NA	NA	NA
WP_001295929.1\|3998981_3999278_+	hypothetical protein	NA	NA	NA	NA
WP_000763554.1\|3999292_3999508_+	hypothetical protein	NA	NA	NA	NA
WP_000132039.1\|3999504_4000188_+	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	1.1e-32	36.1
WP_000631813.1\|4000184_4000415_+	hypothetical protein	NA	NA	NA	NA
WP_000206212.1\|4000404_4000611_+	hypothetical protein	NA	NA	NA	NA
WP_001170114.1\|4000612_4001062_+	regulatory protein GemA	A4JWM5	Burkholderia_virus	6.1e-24	45.1
WP_001281701.1\|4001033_4001423_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	1.5e-31	54.2
4006342:4006357	attR	NA	NA	NA	NA

DBSCAN-SWA_9

4212749 : 4258458

Enterobacteria_phage(56.0%)

lysis,terminase,head,tail,portal,holin,integrase,tRNA,capsid

attL 4211067:4211081|attR 4239661:4239675

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4211067:4211081	attL	NA	NA	NA	NA
WP_001295972.1\|4212749_4213856_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476093.1\|4213909_4214371_-	phosphatase NudJ	NA	NA	NA	NA
WP_001248677.1\|4214380_4215034_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000444487.1\|4215205_4216456_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
WP_000741335.1\|4216569_4217712_-\|integrase	tyrosine-type recombinase/integrase	Q77Z02	Phage_21	3.6e-206	100.0
WP_000088653.1\|4217701_4217938_-	excisionase	NA	NA	NA	NA
WP_000490213.1\|4218077_4218317_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.7e-39	96.2
WP_000002139.1\|4218300_4218627_-	ASCH domain-containing protein	A5VWB6	Enterobacteria_phage	9.8e-48	95.7
WP_000763374.1\|4218626_4218848_-	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	2.3e-32	93.2
WP_021533932.1\|4218946_4219228_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	3.0e-45	95.7
WP_000548516.1\|4219238_4219430_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	1.8e-25	93.7
WP_000149537.1\|4219402_4219585_-	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	1.8e-27	98.3
WP_000186848.1\|4219581_4220262_-	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	1.6e-132	100.0
WP_000100847.1\|4220258_4221044_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995418.1\|4221049_4221346_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	8.9e-48	98.0
WP_000233576.1\|4221421_4221628_-	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
WP_000858975.1\|4222223_4222913_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.8e-92	75.0
WP_001067458.1\|4223017_4223248_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
WP_001182900.1\|4223317_4223857_+	hypothetical protein	K7PJT7	Enterobacteria_phage	2.6e-61	67.0
WP_001435464.1\|4223943_4224873_+	replication protein	A0A0M5M7Y1	Salmonella_phage	6.1e-111	64.1
WP_000788794.1\|4224869_4225571_+	replication protein P of bacteriophage	M1FJ72	Enterobacteria_phage	1.5e-125	97.0
WP_022645049.1\|4225820_4230086_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA
WP_000700202.1\|4230122_4231166_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_072147164.1\|4231515_4231617_+	hypothetical protein	NA	NA	NA	NA
WP_001053005.1\|4231613_4232069_+	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	1.6e-59	66.9
WP_000224914.1\|4232068_4232239_+	hypothetical protein	K7P7K0	Enterobacteria_phage	2.4e-13	69.8
WP_000774479.1\|4232231_4232522_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	2.3e-48	95.8
WP_001099488.1\|4232518_4232881_+	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	1.6e-59	95.7
WP_000971096.1\|4232877_4233018_+	YlcG family protein	K7PHH3	Enterobacteria_phage	8.5e-09	68.9
WP_001097224.1\|4233014_4233704_+	antiterminator Q	I6PDF8	Cronobacter_phage	4.9e-57	48.5
WP_000544528.1\|4234025_4234331_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	7.0e-40	87.6
WP_001180486.1\|4234317_4234794_+	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	7.3e-84	94.9
WP_001228695.1\|4235010_4235193_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_001298464.1\|4235283_4235577_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	7.0e-45	92.8
WP_000830178.1\|4236057_4236384_+	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_000881610.1\|4236590_4236773_+	hypothetical protein	NA	NA	NA	NA
WP_000453620.1\|4237336_4237882_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	6.8e-94	98.3
WP_001027261.1\|4237856_4239782_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.1
4239661:4239675	attR	NA	NA	NA	NA
WP_000198149.1\|4239778_4239985_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001295977.1\|4239981_4241583_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.4e-309	98.9
WP_000123268.1\|4241563_4242883_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.1e-230	97.7
WP_001295978.1\|4242892_4243225_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	3.8e-55	99.1
WP_000063293.1\|4243280_4244306_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	7.8e-192	99.4
WP_000158908.1\|4244347_4244746_+	DNA packaging protein from bacteriophage origin	A0A0K2FIR1	Enterobacteria_phage	1.0e-62	98.5
WP_000753018.1\|4244757_4245111_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	2.2e-61	98.3
WP_000985120.1\|4245122_4245701_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	92.7
WP_000683150.1\|4245697_4246093_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	2.9e-70	98.5
WP_001295979.1\|4246100_4246841_+\|tail	phage tail protein	A0A2I6TC77	Escherichia_phage	1.6e-130	98.0
WP_000479203.1\|4246856_4247279_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.2e-68	94.3
WP_000459457.1\|4247260_4247695_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_000840216.1\|4247687_4250249_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	98.4
WP_000847375.1\|4250245_4250575_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	2.8e-58	99.1
WP_001152626.1\|4250574_4251273_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	5.1e-134	99.6
WP_023146277.1\|4251277_4252021_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.0e-148	97.2
WP_023149564.1\|4251957_4252560_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-88	85.6
WP_001531667.1\|4252620_4256103_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.3
WP_000290538.1\|4256161_4258183_+	hypothetical protein	A0A0E3M0V5	Enterobacteria_phage	7.2e-181	72.3
WP_000654172.1\|4258179_4258458_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	9.9e-25	55.4

DBSCAN-SWA_10

4396419 : 4466134

Stx2-converting_phage(25.0%)

terminase,head,tail,portal,protease,holin,transposase,integrase,capsid

attL 4392593:4392607|attR 4398503:4398517

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4392593:4392607	attL	NA	NA	NA	NA
WP_000113700.1\|4396419_4397550_-\|integrase	tyrosine-type recombinase/integrase	O21940	Phage_21	3.4e-103	51.4
WP_000113189.1\|4397527_4397776_-	excisionase	NA	NA	NA	NA
WP_016230610.1\|4397840_4400312_-	exonuclease	A0A192Y6E0	Salmonella_phage	5.7e-55	56.0
4398503:4398517	attR	NA	NA	NA	NA
WP_001090200.1\|4400404_4400596_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449179.1\|4400592_4400781_-	hypothetical protein	NA	NA	NA	NA
WP_023142248.1\|4401130_4401298_+	hypothetical protein	NA	NA	NA	NA
WP_001171951.1\|4401346_4401565_-	hypothetical protein	NA	NA	NA	NA
WP_000379589.1\|4401724_4401880_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.8e-07	51.1
WP_000103687.1\|4402152_4402869_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	1.7e-52	42.0
WP_000471549.1\|4402918_4403134_+	transcriptional regulator	NA	NA	NA	NA
WP_000693845.1\|4403130_4403556_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000095675.1\|4403578_4404541_+	DNA-binding protein	S5FM81	Shigella_phage	1.4e-70	56.4
WP_000788950.1\|4404547_4405294_+	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	4.0e-113	83.8
WP_000450998.1\|4405315_4406086_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.6e-80	64.5
WP_001151161.1\|4406101_4406527_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.2e-63	94.0
WP_000150294.1\|4406701_4407367_+	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_000018429.1\|4407547_4407760_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	5.2e-26	90.0
WP_001329966.1\|4407927_4408200_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.5e-12	49.2
WP_001265085.1\|4408201_4409257_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.0e-90	48.4
WP_000140014.1\|4409257_4409638_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	2.9e-35	64.5
WP_001513213.1\|4409634_4410456_+	antitermination protein	K7P7B9	Enterobacteria_phage	1.7e-80	60.1
WP_000917751.1\|4410682_4410880_+	hypothetical protein	Q9MC00	Enterobacteria_phage	6.1e-29	98.5
WP_000024331.1\|4411031_4412081_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	4.4e-198	95.4
WP_023142244.1\|4412882_4413014_+	DUF3927 domain-containing protein	H6WZJ7	Escherichia_phage	1.1e-05	100.0
WP_000871291.1\|4413294_4413630_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
WP_016230612.1\|4413890_4415744_+	SASA family carbohydrate esterase	Q08JA2	Stx2-converting_phage	0.0e+00	90.3
WP_000284510.1\|4415894_4416110_+\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_000193278.1\|4416114_4416459_+	YdfR family protein	K7PGU6	Enterobacteria_phage	2.8e-37	95.2
WP_000369850.1\|4416424_4416697_-	hypothetical protein	NA	NA	NA	NA
WP_000992071.1\|4416802_4417336_+	lysozyme	Q6H9V6	Enterobacteria_phage	4.8e-100	95.5
WP_032140280.1\|4417890_4417977_+	hypothetical protein	NA	NA	NA	NA
WP_012578895.1\|4418198_4418384_+	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	2.7e-18	98.4
WP_000736382.1\|4418469_4418685_+	hypothetical protein	NA	NA	NA	NA
WP_000095741.1\|4418883_4419084_-	YlcI/YnfO family protein	H6WZK6	Escherichia_phage	4.3e-30	98.5
WP_000829185.1\|4419125_4419491_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	2.5e-60	93.4
WP_000958366.1\|4419781_4420345_+\|terminase	terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	1.6e-82	92.0
WP_001296023.1\|4420341_4422003_+\|terminase	terminase large subunit	B6DZ98	Enterobacteria_phage	0.0e+00	98.7
WP_000173031.1\|4422066_4424004_+\|capsid	phage major capsid protein	H6WZL0	Escherichia_phage	0.0e+00	100.0
WP_001063099.1\|4424048_4424270_+	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
WP_000267294.1\|4424215_4426801_+\|portal	phage portal protein	A0A0P0ZDD0	Stx2-converting_phage	0.0e+00	100.0
WP_000125990.1\|4426797_4427124_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZBH1	Stx2-converting_phage	9.2e-54	100.0
WP_001007905.1\|4427133_4427484_+\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
WP_000573391.1\|4427480_4427927_+	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
WP_000133388.1\|4427923_4428268_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
WP_001275441.1\|4428334_4429051_+\|tail	tail protein	A0A0P0ZDV1	Stx2-converting_phage	3.6e-127	99.6
WP_078214786.1\|4429065_4429440_+\|tail	phage tail protein	A0A0P0ZE84	Stx2-converting_phage	8.6e-64	98.4
WP_001513217.1\|4429535_4429745_+	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	1.5e-33	100.0
WP_000212991.1\|4429792_4433035_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	91.6
WP_000807937.1\|4433027_4433369_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	9.0e-60	95.6
WP_001296027.1\|4433368_4434067_+\|tail	phage minor tail protein L	B6DZB1	Enterobacteria_phage	5.8e-130	97.4
WP_000194730.1\|4434077_4434821_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	4.3e-147	97.6
WP_061089814.1\|4434766_4435399_+\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	3.0e-101	97.6
WP_000514710.1\|4435741_4439215_+	host specificity protein J	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	89.7
WP_001298859.1\|4439855_4441397_+\|transposase	IS21-like element ISEc12 family transposase	K4I413	Acidithiobacillus_phage	1.7e-129	46.4
WP_001016257.1\|4441411_4442158_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
WP_071550361.1\|4442619_4445526_+	hypothetical protein	A0A0F7LDR4	Escherichia_phage	1.1e-118	45.9
WP_001164137.1\|4445541_4446069_+\|tail	tail fiber assembly protein	A0A0C4UR05	Shigella_phage	8.4e-73	77.7
WP_000972097.1\|4446099_4446633_-\|tail	tail fiber assembly protein	A0A077SL44	Escherichia_phage	1.8e-67	70.1
WP_022645053.1\|4446634_4447420_-	hypothetical protein	Q858V4	Yersinia_virus	1.3e-109	77.8
WP_001421220.1\|4447647_4447830_+	recombinase family protein	A0A0C4UR34	Shigella_phage	1.4e-24	95.0
WP_000240999.1\|4448028_4448697_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000937495.1\|4448753_4449023_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	9.3e-20	79.4
WP_001348267.1\|4449434_4449992_-	Rha family transcriptional regulator	Q8H9L9	Vibrio_phage	4.2e-30	63.8
WP_001296031.1\|4449988_4450264_-	hypothetical protein	S5MQL6	Escherichia_phage	1.1e-10	52.9
WP_000443082.1\|4450639_4451446_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_000209513.1\|4451445_4452639_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_001195273.1\|4452650_4454009_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	3.9e-37	41.2
WP_000763535.1\|4454012_4455608_-	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
WP_001194644.1\|4455607_4457170_-	anthranilate synthase component I	NA	NA	NA	NA
WP_001700591.1\|4457261_4457306_-	trp operon leader peptide	NA	NA	NA	NA
WP_001285702.1\|4457443_4458325_+	5'-3' exoribonuclease	NA	NA	NA	NA
WP_001295575.1\|4458321_4458942_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_001296033.1\|4458969_4460865_+	DUF2207 domain-containing protein	NA	NA	NA	NA
WP_001291206.1\|4461077_4461953_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_023141019.1\|4462158_4463145_+	hypothetical protein	NA	NA	NA	NA
WP_001000715.1\|4463154_4463463_+	hypothetical protein	NA	NA	NA	NA
WP_001278898.1\|4463519_4464110_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_000559273.1\|4464106_4464865_-	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	4.4e-06	23.4
WP_000422062.1\|4465084_4466134_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5

DBSCAN-SWA_11

4957303 : 5046801

102

Escherichia_phage(23.26%)

terminase,tail,holin,portal,plate,transposase,integrase,tRNA,capsid

attL 5003000:5003059|attR 5046863:5046987

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099156422.1\|4957303_4958652_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	8.7e-74	52.4
WP_000568520.1\|4958761_4959772_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.6e-09	25.5
WP_000580323.1\|4959780_4960392_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_072093883.1\|4960530_4960596_-	hypothetical protein	NA	NA	NA	NA
WP_001024911.1\|4960666_4961269_+	YebB family permuted papain-like enzyme	NA	NA	NA	NA
WP_001295503.1\|4961270_4961792_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
WP_000907234.1\|4961826_4962567_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_077249130.1\|4962595_4963048_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_001258676.1\|4963040_4964813_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_000891625.1\|4965122_4965689_+	hydrolase	NA	NA	NA	NA
WP_000639277.1\|4965685_4966504_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.5e-72	99.2
WP_000252980.1\|4966556_4966952_+	hypothetical protein	NA	NA	NA	NA
WP_000019588.1\|4966992_4967736_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
WP_000564759.1\|4967732_4968704_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_000176764.1\|4968739_4971169_-	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	NA	NA	NA	NA
WP_001214293.1\|4971193_4972294_-	cytochrome c	NA	NA	NA	NA
WP_001185734.1\|4972681_4973428_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001490174.1\|4973441_4974008_-	VOC family protein	NA	NA	NA	NA
WP_001025326.1\|4974223_4975957_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	8.8e-87	33.7
WP_001202076.1\|4976009_4976402_-	flagellar protein FlhE	NA	NA	NA	NA
WP_000066973.1\|4976401_4978480_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_001278946.1\|4978472_4979621_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_000983600.1\|4979809_4980454_-	protein phosphatase CheZ	NA	NA	NA	NA
WP_000763867.1\|4980464_4980854_-	chemotaxis protein CheY	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
WP_000036371.1\|4980868_4981918_-	chemotaxis response regulator protein-glutamate methylesterase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
WP_000204320.1\|4981920_4982781_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_001296146.1\|4983071_4984733_-	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-10	40.3
WP_000147302.1\|4984877_4985381_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_001531763.1\|4985401_4987366_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_000795641.1\|4987370_4988297_-	flagellar motor protein MotB	NA	NA	NA	NA
WP_000906342.1\|4988293_4989181_-	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_001291603.1\|4989307_4989886_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_001295647.1\|4989888_4990239_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_000122413.1\|4991018_4991447_+	universal stress protein UspC	NA	NA	NA	NA
WP_001296148.1\|4991453_4992878_-	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
WP_001296149.1\|4992852_4993653_-	trehalose-phosphatase	NA	NA	NA	NA
WP_000100203.1\|4993819_4994806_-	L-arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_001187827.1\|4994820_4996335_-	L-arabinose ABC transporter ATP-binding protein AraG	A0A285PWH2	Cedratvirus	1.3e-12	29.7
WP_000548680.1\|4996404_4997394_-	arabinose ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000179469.1\|4998188_4998692_+	non-heme ferritin-like protein	NA	NA	NA	NA
WP_000082127.1\|4998769_4999021_-	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_010723106.1\|4999135_4999222_-	stress response protein AzuC	NA	NA	NA	NA
WP_001237881.1\|4999485_4999809_+	hypothetical protein	NA	NA	NA	NA
WP_000917208.1\|4999980_5000478_+	non-heme ferritin	NA	NA	NA	NA
WP_000377224.1\|5000515_5000755_-	YecH family protein	NA	NA	NA	NA
WP_000797555.1\|5000945_5002157_+	tyrosine transporter TyrP	NA	NA	NA	NA
WP_000847882.1\|5002207_5002873_-	UPF0149 family protein YecA	NA	NA	NA	NA
5003000:5003059	attL	NA	NA	NA	NA
WP_001296152.1\|5003344_5003764_-	hypothetical protein	G8C7Q7	Escherichia_phage	1.8e-49	68.8
WP_001531767.1\|5004978_5005203_-	hypothetical protein	NA	NA	NA	NA
WP_001531768.1\|5005364_5005754_-\|tail	phage tail protein	E5FFG4	Burkholderia_phage	1.0e-14	37.9
WP_001018353.1\|5005789_5007430_-	hypothetical protein	A0A2I7R3J9	Vibrio_phage	1.2e-19	29.3
WP_000444667.1\|5007538_5007820_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000785563.1\|5007832_5008345_-\|tail	phage tail protein	NA	NA	NA	NA
WP_000117510.1\|5008362_5009865_-\|tail	tail sheath protein	R9TMQ0	Vibrio_phage	5.5e-69	33.5
WP_000626358.1\|5009861_5010251_-	hypothetical protein	A0A2H4EXG4	Aeromonas_phage	9.4e-05	30.8
WP_000829621.1\|5010250_5011435_-\|tail	phage tail protein	J9QDX3	Clostridium_phage	2.5e-16	35.2
WP_000203868.1\|5011427_5012054_-\|tail	phage tail protein I	A0A193GYD1	Enterobacter_phage	2.0e-25	38.8
WP_000633314.1\|5012056_5012977_-\|plate	baseplate assembly protein	D5LGZ3	Escherichia_phage	6.4e-68	47.8
WP_000901289.1\|5012973_5013315_-\|plate	phage baseplate assembly protein	D4HTV2	Vibrio_phage	1.1e-20	51.6
WP_000079174.1\|5013317_5014220_-\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_000015612.1\|5014200_5014737_-	hypothetical protein	NA	NA	NA	NA
WP_000774516.1\|5014733_5015414_-	hypothetical protein	NA	NA	NA	NA
WP_001531773.1\|5015445_5015826_-	hypothetical protein	NA	NA	NA	NA
WP_000105179.1\|5015822_5016242_-	DNA-packaging protein	NA	NA	NA	NA
WP_001283997.1\|5016276_5017311_-\|capsid	major capsid protein	A0A2I6TCE5	Escherichia_phage	6.6e-106	56.5
WP_000206292.1\|5017369_5017699_-	hypothetical protein	A0A2R9YJN3	Escherichia_phage	2.0e-08	39.5
WP_001145892.1\|5017698_5019006_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	4.9e-106	53.7
WP_000126513.1\|5019005_5020580_-\|portal	phage portal protein	E4WL21	Enterobacteria_phage	8.6e-190	64.0
WP_000203897.1\|5020576_5020810_-	hypothetical protein	NA	NA	NA	NA
WP_000148195.1\|5020809_5022672_-\|terminase	phage terminase large subunit family protein	A0A1I9KF19	Aeromonas_phage	1.1e-191	53.2
WP_000168117.1\|5022658_5023225_-	hypothetical protein	A0A1I9KFT4	Aeromonas_phage	2.9e-31	46.2
WP_001531775.1\|5023593_5023839_+	hypothetical protein	NA	NA	NA	NA
WP_000734931.1\|5023898_5024093_-	hypothetical protein	NA	NA	NA	NA
WP_000131873.1\|5024100_5024580_-	TIGR02594 family protein	A0A222YWL8	Escherichia_phage	4.6e-62	68.8
WP_000172496.1\|5024579_5024852_-\|holin	phage holin family protein	A0A0A0YPY6	Escherichia_phage	9.8e-09	42.9
WP_001294589.1\|5024851_5025235_-	hypothetical protein	NA	NA	NA	NA
WP_000064384.1\|5025347_5026019_-	antitermination protein	Q7Y3X2	Yersinia_phage	1.9e-16	33.5
WP_000717783.1\|5026018_5026312_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	3.3e-34	70.5
WP_000057010.1\|5026308_5026905_-	DUF1367 family protein	H9C173	Pectobacterium_phage	1.5e-70	64.1
WP_001025459.1\|5026982_5027162_-	hypothetical protein	NA	NA	NA	NA
WP_000847617.1\|5027313_5027955_-	hypothetical protein	NA	NA	NA	NA
WP_000536919.1\|5028198_5028432_+	hypothetical protein	NA	NA	NA	NA
WP_000224749.1\|5028830_5029319_+	ImmA/IrrE family metallo-endopeptidase	A0A142KB62	Gordonia_phage	6.4e-27	42.7
WP_001138663.1\|5029328_5029934_+	hypothetical protein	NA	NA	NA	NA
WP_078214787.1\|5032281_5033205_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_001531776.1\|5033379_5034168_-	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	1.1e-39	69.8
WP_000661082.1\|5034849_5035074_-	hypothetical protein	NA	NA	NA	NA
WP_000875806.1\|5035070_5035382_-	hypothetical protein	A0A222YXX1	Escherichia_phage	1.2e-34	65.7
WP_000918616.1\|5035378_5035615_-	hypothetical protein	NA	NA	NA	NA
WP_000214056.1\|5035616_5036027_-	hypothetical protein	NA	NA	NA	NA
WP_085949154.1\|5036646_5037793_+\|transposase	IS3-like element ISEc52 family transposase	Q716C2	Shigella_phage	2.4e-173	96.3
WP_001023813.1\|5038723_5039479_-	hypothetical protein	H9C164	Pectobacterium_phage	2.4e-41	68.5
WP_000943914.1\|5039475_5039700_-	hypothetical protein	H9C163	Pectobacterium_phage	6.1e-17	54.1
WP_000431205.1\|5039739_5040216_-	hypothetical protein	H9C162	Pectobacterium_phage	1.9e-23	48.6
WP_000360804.1\|5040274_5040505_-	transcriptional regulator	H6WRX5	Salmonella_phage	1.5e-21	63.2
WP_001296165.1\|5040603_5041017_+	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	8.7e-09	49.1
WP_000388260.1\|5042027_5042348_+	hypothetical protein	NA	NA	NA	NA
WP_000151806.1\|5042378_5044595_+	hypothetical protein	H9C157	Pectobacterium_phage	4.7e-101	35.6
WP_000100753.1\|5044591_5045161_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	6.1e-37	49.2
WP_000916334.1\|5045160_5045343_+	hypothetical protein	NA	NA	NA	NA
WP_000833838.1\|5045552_5045816_+	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	1.2e-06	38.0
WP_001531780.1\|5045784_5046801_+\|integrase	tyrosine-type recombinase/integrase	H9C152	Pectobacterium_phage	1.1e-126	63.6
5046863:5046987	attR	NA	NA	NA	NA

DBSCAN-SWA_12

5065045 : 5143178

Escherichia_phage(40.0%)

terminase,head,tail,protease,portal,holin,transposase,integrase,capsid

attL 5099821:5099836|attR 5166180:5166195

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001347174.1\|5065045_5065570_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.2e-33	60.0
WP_000879824.1\|5065726_5066524_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001310919.1\|5066533_5067085_-	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA
WP_001070440.1\|5067253_5067586_-	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_001274299.1\|5067929_5068244_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_000994425.1\|5068458_5070117_+	flagellar basal body M-ring protein FliF	NA	NA	NA	NA
WP_000067950.1\|5070109_5071105_+	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_001282677.1\|5071097_5071784_+	flagellar assembly protein FliH	NA	NA	NA	NA
WP_000213308.1\|5071783_5073157_+	flagellum-specific ATP synthase FliI	NA	NA	NA	NA
WP_000807584.1\|5073175_5073619_+	flagella biosynthesis chaperone FliJ	NA	NA	NA	NA
WP_000620069.1\|5073615_5074743_+	flagellar hook length control protein FliK	NA	NA	NA	NA
WP_000133106.1\|5074847_5075312_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_001295641.1\|5075316_5076321_+	flagellar motor switch protein FliM	NA	NA	NA	NA
WP_001282103.1\|5076317_5076731_+	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_001313947.1\|5076733_5077099_+	flagellar type III secretion system protein FliO	NA	NA	NA	NA
WP_001253318.1\|5077098_5077836_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_000187358.1\|5077845_5078115_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_000983988.1\|5078123_5078909_+	flagellar type III secretion system protein FliR	NA	NA	NA	NA
WP_000103992.1\|5079198_5079822_+	transcriptional regulator RcsA	NA	NA	NA	NA
WP_071524607.1\|5079865_5080108_-	protein DsrB	NA	NA	NA	NA
WP_000844800.1\|5080216_5080444_+	peroxide/acid resistance protein YodD	NA	NA	NA	NA
WP_000491527.1\|5080739_5081555_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
WP_001531784.1\|5081551_5083246_-	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	1.3e-18	35.6
WP_000009307.1\|5083416_5083599_-	DUF2158 domain-containing protein	NA	NA	NA	NA
WP_032179065.1\|5083677_5084595_-	DUF808 domain-containing protein	NA	NA	NA	NA
WP_001212226.1\|5084767_5085688_+	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_000228686.1\|5085676_5086147_-	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	5.2e-34	48.3
WP_001157265.1\|5086127_5087546_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-101	55.1
WP_001296176.1\|5087612_5088308_-	phosphohydrolase	S4W232	Pandoravirus	1.6e-07	28.7
WP_001330593.1\|5088347_5088713_-	hypothetical protein	NA	NA	NA	NA
WP_000824383.1\|5089278_5090394_+	outer membrane protein F	Q1MVN1	Enterobacteria_phage	2.9e-91	47.4
WP_000218217.1\|5090986_5091838_+	protein deglycase HchA	NA	NA	NA	NA
WP_000826711.1\|5091945_5093304_-	heavy metal sensor histidine kinase	NA	NA	NA	NA
WP_001347103.1\|5093303_5093975_-	response regulator transcription factor HprR	W8CYM9	Bacillus_phage	5.4e-32	35.2
WP_000920127.1\|5094107_5094521_+	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_000740067.1\|5094629_5095634_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_001240063.1\|5095634_5096270_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_099156434.1\|5096353_5097702_-\|transposase	IS3-like element IS1397 family transposase	A0A1B1P773	Bacillus_phage	1.3e-74	52.4
WP_001007778.1\|5097962_5098613_+	metal-binding protein ZinT	NA	NA	NA	NA
WP_000355363.1\|5099696_5099984_-	hypothetical protein	NA	NA	NA	NA
5099821:5099836	attL	NA	NA	NA	NA
WP_000235978.1\|5099994_5100699_-\|tail	tail fiber domain-containing protein	A0A1X7QGH6	Escherichia_phage	4.6e-58	61.7
WP_000654141.1\|5100708_5100990_-	hypothetical protein	A0A1X7QHA1	Escherichia_phage	1.6e-17	47.8
WP_001554173.1\|5100989_5103368_-\|tail	phage tail fiber protein	A0A1X7QGG5	Escherichia_phage	1.9e-185	76.1
WP_000526135.1\|5103488_5103947_-\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	2.9e-13	32.3
WP_001228252.1\|5104143_5104743_-	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	3.4e-102	92.5
WP_001554175.1\|5104810_5108206_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	88.6
WP_000741570.1\|5108266_5108914_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	6.6e-112	97.2
WP_000140743.1\|5108811_5109555_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.1e-150	97.6
WP_001152448.1\|5109560_5110259_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	3.8e-129	94.8
WP_001330090.1\|5110258_5110615_-\|tail	tail protein	A0A0P0ZDL9	Stx2-converting_phage	2.8e-40	66.7
WP_000224009.1\|5110592_5113820_-\|tail	phage tail tape measure protein	A0A1B5FPE2	Escherichia_phage	0.0e+00	95.7
WP_071590020.1\|5113866_5114127_-	DUF4035 domain-containing protein	A0A1B5FP87	Escherichia_phage	1.6e-40	97.7
WP_001324129.1\|5114168_5114555_-\|tail	tail assembly protein	A0A1B5FP91	Escherichia_phage	8.9e-64	100.0
WP_000097526.1\|5114554_5115259_-	immunoglobulin domain-containing protein	A0A1B5FP82	Escherichia_phage	3.7e-116	94.4
WP_001206306.1\|5115319_5115664_-	DUF3168 domain-containing protein	A0A1B5FP84	Escherichia_phage	1.4e-55	97.4
WP_014639219.1\|5115660_5116110_-	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	1.0e-63	80.5
WP_001147814.1\|5116106_5116445_-\|head	phage head closure protein	A0A1B5FP90	Escherichia_phage	7.5e-51	90.2
WP_000719066.1\|5116453_5116771_-\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	6.2e-23	50.5
WP_000766111.1\|5116847_5118065_-\|capsid	phage major capsid protein	A0A1W6JP20	Morganella_phage	4.5e-162	71.6
WP_000999828.1\|5118079_5118679_-\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.9e-89	81.0
WP_000923132.1\|5118671_5119898_-\|portal	phage portal protein	Q8SBI0	Shigella_phage	1.5e-202	82.6
WP_001140907.1\|5120045_5121803_-\|terminase	terminase large subunit	A0A1B5FP96	Escherichia_phage	0.0e+00	98.9
WP_001554177.1\|5121802_5122285_-\|terminase	phage terminase small subunit P27 family	A0A1B5FPA0	Escherichia_phage	7.4e-84	96.9
WP_001135103.1\|5122432_5122783_-	HNH endonuclease	A0A1B5FP94	Escherichia_phage	4.7e-64	97.4
WP_000738421.1\|5123308_5123602_+	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	5.9e-44	90.7
WP_075202333.1\|5123692_5123875_-	hypothetical protein	A0A0P0ZE50	Stx2-converting_phage	2.2e-17	77.0
WP_000992101.1\|5124091_5124625_-	lysozyme	Q08J98	Stx2-converting_phage	1.1e-99	93.8
WP_000193269.1\|5124688_5125039_-	YdfR family protein	K7PGU6	Enterobacteria_phage	1.9e-36	94.0
WP_000372595.1\|5125043_5125259_-\|holin	holin	A0A2R2Z340	Escherichia_phage	3.4e-33	98.6
WP_000874243.1\|5125566_5125755_-	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	7.2e-27	95.2
WP_023281677.1\|5126014_5126350_+	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
WP_000562553.1\|5126630_5126762_-	DUF3927 domain-containing protein	H6WZJ7	Escherichia_phage	3.7e-06	100.0
WP_021538919.1\|5127657_5128479_-	antitermination protein	K7P7B9	Enterobacteria_phage	1.5e-76	58.2
WP_000139998.1\|5128493_5128856_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	9.6e-36	63.6
WP_001296186.1\|5128856_5129915_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	7.5e-89	47.7
WP_023141427.1\|5129916_5130189_-	hypothetical protein	I6PCV7	Cronobacter_phage	4.2e-12	50.8
WP_000813254.1\|5130356_5130512_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_001224667.1\|5131602_5131785_-	hypothetical protein	A0A2R2Z308	Escherichia_phage	2.0e-26	96.7
WP_001296187.1\|5131878_5132235_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	3.9e-58	98.3
WP_001151210.1\|5132292_5132715_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	1.3e-63	90.6
WP_000095675.1\|5132755_5133718_-	DNA-binding protein	S5FM81	Shigella_phage	1.4e-70	56.4
WP_000693943.1\|5133740_5134166_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000391951.1\|5134149_5134431_-	hypothetical protein	K7PHA1	Enterobacteria_phage	6.5e-24	72.6
WP_000362153.1\|5134531_5134951_+	hypothetical protein	K7PK07	Enterobacteria_phage	8.8e-25	65.1
WP_000379575.1\|5135216_5135372_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_001171947.1\|5135531_5135750_+	hypothetical protein	NA	NA	NA	NA
WP_001296188.1\|5135753_5135918_-	hypothetical protein	NA	NA	NA	NA
WP_000854558.1\|5136317_5136506_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001070254.1\|5136502_5136694_+	DUF1482 family protein	NA	NA	NA	NA
WP_023363203.1\|5136786_5139258_+	exonuclease	K7PLW7	Enterobacteria_phage	3.8e-59	60.9
WP_000096342.1\|5139316_5139520_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_000533615.1\|5139519_5140545_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	3.4e-102	57.9
WP_001311896.1\|5140780_5141578_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_000060157.1\|5141915_5143178_+\|integrase	tyrosine-type recombinase/integrase	A0A1B0VMI6	Pseudomonas_phage	2.6e-72	38.5
5166180:5166195	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018977

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018979

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection