CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP018990	Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_1, complete sequence	0 crisprs	RT	0	1
NZ_CP018985	Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_6, complete sequence	0 crisprs	NA	0	0
NZ_CP018989	Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_KPC, complete sequence	0 crisprs	RT	0	2
NZ_CP018986	Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_5, complete sequence	0 crisprs	NA	0	0
NZ_CP018988	Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_3, complete sequence	0 crisprs	NA	0	0
NZ_CP018987	Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_4, complete sequence	0 crisprs	NA	0	0
NZ_CP018991	Escherichia coli strain Ecol_AZ146 chromosome, complete genome	2 crisprs	DEDDh,DinG,RT,c2c9_V-U4,cas3,csa3,WYL,PrimPol	1	17
NZ_CP018984	Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_7, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018991_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018991_1

4716379-4716520

Orphan

Consensus_repeat	Method
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018991_1

>merge|NZ_CP018991|1|4716379-4716520|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAGAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGCGCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

>NZ_CP018991|1|1|4716379-4716520|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	AAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGC
GCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018991.1\|WP_001181475.1\|4716693_4719495_+\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499
NZ_CP018991.1\|WP_001235263.1\|4715615_4716332_+\|succinate-dehydrogenase-iron-sulfur-subunit-SdhB	unknown	unknown	gnl\|CDD\|235652
NZ_CP018991.1\|WP_001305582.1\|4712600_4712708_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018991.1\|WP_000648957.1\|4725784_4728418_+\|mannosylglycerate-hydrolase	unknown	unknown	gnl\|CDD\|182093
NZ_CP018991.1\|WP_001237779.1\|4709293_4709755_+\|TRAP-transporter-small-permease	unknown	unknown	gnl\|CDD\|225632
NZ_CP018991.1\|WP_000568275.1\|4732935_4734075_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|184965
NZ_CP018991.1\|WP_000254365.1\|4713486_4713834_+\|succinate-dehydrogenase-membrane-anchor-subunit	unknown	unknown	gnl\|CDD\|181901
NZ_CP018991.1\|WP_000884361.1\|4731351_4732920_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|185052
NZ_CP018991.1\|WP_000735581.1\|4708265_4709234_+\|TRAP-transporter-substrate-binding-protein-DctP	unknown	unknown	gnl\|CDD\|270387
NZ_CP018991.1\|WP_000126143.1\|4709754_4711065_+\|TRAP-transporter-large-permease	unknown	unknown	gnl\|CDD\|224509
NZ_CP018991.1\|WP_001048602.1\|4720820_4721987_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234813
NZ_CP018991.1\|WP_000725054.1\|4728615_4729809_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP018991.1\|WP_000775540.1\|4713833_4715600_+\|succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|181594
NZ_CP018991.1\|WP_000509910.1\|4722959_4723682_-\|mannosyl-D-glycerate-transport/metabolism-system-transcriptional-repressor-MngR	unknown	unknown	gnl\|CDD\|182065
NZ_CP018991.1\|WP_000263355.1\|4713088_4713493_+\|succinate-dehydrogenase-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|181900
NZ_CP018991.1\|WP_001531490.1\|4723850_4725767_+\|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC	unknown	unknown	gnl\|CDD\|182066
NZ_CP018991.1\|WP_000399432.1\|4707041_4708238_+\|UxaA-family-hydrolase	unknown	unknown	gnl\|CDD\|377287
NZ_CP018991.1\|WP_000785832.1\|4711111_4712395_-\|citrate-(Si)-synthase	unknown	unknown	gnl\|CDD\|180164
NZ_CP018991.1\|WP_000025458.1\|4721986_4722856_+\|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|180194
NZ_CP018991.1\|WP_000099866.1\|4719509_4720727_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl\|CDD\|235571

Protein	Function_ID	Function_description	E-value
NZ_CP018991.1\|WP_001181475.1\|4716693_4719495_+\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
NZ_CP018991.1\|WP_001235263.1\|4715615_4716332_+\|succinate-dehydrogenase-iron-sulfur-subunit-SdhB	gnl\|CDD\|235652	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	3.48257e-167
NZ_CP018991.1\|WP_000725054.1\|4728615_4729809_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.01578e-17
NZ_CP018991.1\|WP_000648957.1\|4725784_4728418_+\|mannosylglycerate-hydrolase	gnl\|CDD\|182093	PRK09819, PRK09819, mannosylglycerate hydrolase.	0
NZ_CP018991.1\|WP_001237779.1\|4709293_4709755_+\|TRAP-transporter-small-permease	gnl\|CDD\|225632	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism].	2.66483e-21
NZ_CP018991.1\|WP_000568275.1\|4732935_4734075_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|184965	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II.	0
NZ_CP018991.1\|WP_000254365.1\|4713486_4713834_+\|succinate-dehydrogenase-membrane-anchor-subunit	gnl\|CDD\|181901	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit.	5.54037e-58
NZ_CP018991.1\|WP_000884361.1\|4731351_4732920_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|185052	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA.	0
NZ_CP018991.1\|WP_000735581.1\|4708265_4709234_+\|TRAP-transporter-substrate-binding-protein-DctP	gnl\|CDD\|270387	cd13669, PBP2_TRAP_TM0322_like, Periplasmic component of TRAP-type C4-dicarboxylate transport system TM0322 from Thermotoga maritima and similar proteins; the type 2 periplasmic binding protein fold. This subgroup includes the hyperthermophilic bacterium Thermotoga maritima TRAP-type C4-dicarboxylate transport system TM0322 and its closely related proteins. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.46494e-145
NZ_CP018991.1\|WP_000126143.1\|4709754_4711065_+\|TRAP-transporter-large-permease	gnl\|CDD\|224509	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism].	2.11617e-118
NZ_CP018991.1\|WP_001048602.1\|4720820_4721987_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
NZ_CP018991.1\|WP_000775540.1\|4713833_4715600_+\|succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|181594	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_CP018991.1\|WP_000509910.1\|4722959_4723682_-\|mannosyl-D-glycerate-transport/metabolism-system-transcriptional-repressor-MngR	gnl\|CDD\|182065	PRK09764, PRK09764, GntR family transcriptional regulator.	1.54929e-163
NZ_CP018991.1\|WP_000263355.1\|4713088_4713493_+\|succinate-dehydrogenase-cytochrome-b556-subunit	gnl\|CDD\|181900	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit.	3.50714e-82
NZ_CP018991.1\|WP_001531490.1\|4723850_4725767_+\|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC	gnl\|CDD\|182066	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional.	0
NZ_CP018991.1\|WP_000399432.1\|4707041_4708238_+\|UxaA-family-hydrolase	gnl\|CDD\|377287	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus. Family members include the C termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyze the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyzes D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core.	5.6924e-134
NZ_CP018991.1\|WP_000785832.1\|4711111_4712395_-\|citrate-(Si)-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0
NZ_CP018991.1\|WP_000025458.1\|4721986_4722856_+\|succinate--CoA-ligase-subunit-alpha	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
NZ_CP018991.1\|WP_000099866.1\|4719509_4720727_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	0

>NZ_CP018991.1|WP_001235263.1|4715615_4716332_+|succinate-dehydrogenase-iron-sulfur-subunit-SdhB
MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA
>NZ_CP018991.1|WP_000775540.1|4713833_4715600_+|succinate-dehydrogenase-flavoprotein-subunit
MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY
>NZ_CP018991.1|WP_000254365.1|4713486_4713834_+|succinate-dehydrogenase-membrane-anchor-subunit
MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV
>NZ_CP018991.1|WP_000263355.1|4713088_4713493_+|succinate-dehydrogenase-cytochrome-b556-subunit
MWALFMIRNVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
>NZ_CP018991.1|WP_001305582.1|4712600_4712708_-|hypothetical-protein
MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV
>NZ_CP018991.1|WP_000785832.1|4711111_4712395_-|citrate-(Si)-synthase
MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDGMKIARPRQLYTGYAQRDFKSDIKK
>NZ_CP018991.1|WP_000126143.1|4709754_4711065_+|TRAP-transporter-large-permease
MTALSELLAGSWLDNWLMIIPLMFVCLFINMPVWLAMFCGILTYFLCYSNVPLMVAIQRLIATTQTPSLLAIPFFILLGTLMSYTGIAARILQIANVLIGRMRGGLGGANILVSTMMGGVSASNLADAAMLSRMMVPEMEQKGYSRGFAAAITASGSLITPIIPPGIALILYGLVADVSIGSMFMAGILPGLLCSAMLIVTVWLVAIRRGLKPSSEHWPKPKEVSVALVQAWPALFLIVAVIGGIRANIFTPTEAGAVAVLLVMFIGFVIYRELKISHVFTALSETARSTASVMLIIMASAALGWIFSLERAGITVAEFVTSLTDNKYVFLLIINLLLLVLGMFLEGSAILLILVPLLKPVVAHFGIDPVHFGIIMILNLSLGTLSPPVGTVMLLVCNTVQVSVGQFMREAVPLLISLILLLLVITYIPAISLLLV
>NZ_CP018991.1|WP_001237779.1|4709293_4709755_+|TRAP-transporter-small-permease
MRLLGKMIEVAAVLTLFILVIMTIAAVIMRYCFHMPLQWTEEVSGLLMIWVVMFGAVVAERDNTHLSIPFLADALTSRGQRILAFLVSLMSIILLVVMAWSAWKLAAGTAFKTTQILKISWFWIDIAVTVGAIGVACFTALQLIKKTPRKEGE
>NZ_CP018991.1|WP_000735581.1|4708265_4709234_+|TRAP-transporter-substrate-binding-protein-DctP
MKKLLTPLLFLLALFSPMLNAAPVTIKIAYESNPGEPADTVVKHWAELVKKKSNGDIVFELYPSSQLGSKQDITEQALMGMNIITISDVGFLTDYDADLGILFGPYLTEDPQKLFAIYASDWFKQKEQKLREKGVHIVMSNYLYGTRQIIAKKPIRTPEDLKGMKIRVPNNVMQIKAIEAMGATPTPMPLGDVYPALTQGMIDGVENPVSVLYGQKLHEQAKYLSMVNYLTNTSLWLGGEAFFSTLTPAQLDIIHQTAYEAGLYSQKITTEQDATMLKTMQEQGVEIIYPDVAPFKEKALKVYQQFPEWTPGLYDTIQQQLK
>NZ_CP018991.1|WP_000399432.1|4707041_4708238_+|UxaA-family-hydrolase
MEGYVRQNGRPGIRNTVQVIFMVECASHVAKKIAEGFPCHDVQYFGFSGCYPSDYGYRLVKNLATHSNVGGVLIISLGCENFDRRRLEQEVRESGRPCHTLVIQENKGTTNTITLGKQLVAEMLEQLADTPRCILNWSDLVVGTICGGSDGTSGITGNPAVGRAFDQLLEKGATCIFEESGELLGCEQHMMSRAASSQARDAIEVAMTKAERYYSLMGLGSFSNGNAEGGLTTQEEKSLGAYTKSGDALIAGVILPTQQTPFPGLWLMDVVPDGEPRFGYPNINDSSEALELIASGCHMVLFTTGRGSVIGSVIAPIIKVCNNPQTWEHLSDDMDVNAGRVISEGATLDDIADDIMQVIEHVANGQYCAAERLEHQEFVLTYKAFDYSKSAVCRADPR
>NZ_CP018991.1|WP_001181475.1|4716693_4719495_+|2-oxoglutarate-dehydrogenase-E1-component
MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAISEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE
>NZ_CP018991.1|WP_000099866.1|4719509_4720727_+|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase
MSSVDILVPDLPESVADATVATWHKKPGDVVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV
>NZ_CP018991.1|WP_001048602.1|4720820_4721987_+|ADP-forming-succinate--CoA-ligase-subunit-beta
MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK
>NZ_CP018991.1|WP_000025458.1|4721986_4722856_+|succinate--CoA-ligase-subunit-alpha
MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK
>NZ_CP018991.1|WP_000509910.1|4722959_4723682_-|mannosyl-D-glycerate-transport/metabolism-system-transcriptional-repressor-MngR
MGHKPLYRQIADRIREQITCGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVETHSEVLIFEVIPADNFLQQQLQISEQDRVWHVKRVRYRKQKPVALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGQVFEYSRNAFNTDDYKFTLIAQRKSPR
>NZ_CP018991.1|WP_001531490.1|4723850_4725767_+|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC
MNLTTLTHRDALCLNVRFTSREEAIHALTQRLAALGKISSTEQFLEEVYCRESLGPTALGEGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTTHMKLLTALTTRLADDELRARIQSATTPDELLSALDDKGDAQHTASFSYAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNIYVEKQGANGIEERLTAEQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEALIQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMYRKLGGGMLGILMVPVLAAYTAYSLADKPALAPGFAAGLAANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLMLFVVGEPVAWINNSLTAWLNGLSGNNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMANGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWFGAALVGAAISTAILLIWRHHAVKHGNYLTDGVMP
>NZ_CP018991.1|WP_000648957.1|4725784_4728418_+|mannosylglycerate-hydrolase
MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILEDYFAVKPENKDRVKKLVEGGKLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDKTEFLWQSSDGSEVTAQVLPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMEKLREIYPQRKFVMSRFEEVFEQIEAQRESLAILKGEFIDGKYMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFDYHHGLLEKMWKEILKNHAHDSIGCCCSDKVHREIVARFELAEDMADNLIRFYMRKIADNMPQSDADKLVLFNLMPWPREEVINTTVRLRGSQFNLRDGRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQISQIVPSMGYRTLYIEANQLGNVVTPKSKTEGILENAFWQIALNEDGSLRLVDKDSGVRYDRVFQIEEGSDDGDEYDYSPAKEEWAITSANAKPQYDIIHEAWQSRAIIRYEIAVPRNLSERRAKQCSGRVGVETVITLSHNSRRIDADINLDNQADDHRIRVLIPTPFNTDVVLADTQFGSLTRPVKDCAMNVWQQEGWKEAPVPVWNMLNYAVLQEGRNGIAVFSEGLREFEVIGEENKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVSDSQLRGSFSCRLSLFSYIGTPVTAGVAQQARAWLTPVQCYNKIPWDAMKLNKAKFNVPESYSLLKMPPVGCLISALKKAEDRQELILRLFNPAELTSCDATVAFSRKVMTCTETMMNERFNTEKNEVLKELALFLPGQSRTFSYRIV
>NZ_CP018991.1|WP_000725054.1|4728615_4729809_+|tetratricopeptide-repeat-protein
MKKIVLPVALALLGMNAGAYAADVSIDILSATVKDKRIEGASVTLQRNGAQSVSGITNTSGSISLGTSFADNKDALLIVKKEGYSNLVVKCPCAGMTYAISPVMTNLDGMRVVLSWGEKPFDLDSHLIFPGGHIYFDSKEGTDANLDVDDTDSYGPETVTISKKHFGESYIYAVQDYSNKGLPNSNYLSASKAKVFVYVGSSLVRSYSVPAGKRGNIWTVFKLNPNGEFEDINSVTSANFNGTTLDVRDLATVIMPATDSSAPASPAMQNSGDTQLARKYNREGEAVYKTGQLEQAIQLFQQATELDGNYGQAFSNLGLAYQKNGNIAEAIWANRKAISLASGVNAATTRANSYYNIAKIYETSGQNAEALQHYQLAYTEKNKPSYEEAIARVKTKM
>NZ_CP018991.1|WP_000884361.1|4731351_4732920_+|cytochrome-ubiquinol-oxidase-subunit-I
MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR
>NZ_CP018991.1|WP_000568275.1|4732935_4734075_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY

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Crispr_ID: NZ_CP018991_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018991_2

4883363-4883445

Orphan

I-F

Consensus_repeat	Method
AGTTCACTGCCGTACAGGCAGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018991_2

>merge|NZ_CP018991|2|4883363-4883445|CRISPRCasFinder
AGTTCACTGCCGTACAGGCAGCTTAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACAAGTTCACTGCCGTACAGGCAGAT

>NZ_CP018991|2|2|4883363-4883445|CRISPRCasFinder
AGTTCACTGCCGTACAGGCAGCT	TAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACA
AGTTCACTGCCGTACAGGCAGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018991.1\|WP_000886683.1\|4897154_4898447_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP018991.1\|WP_000228473.1\|4890204_4890699_+\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP018991.1\|WP_000067797.1\|4895720_4897064_+\|replication-associated-recombination-protein-RarA	unknown	unknown	gnl\|CDD\|237355
NZ_CP018991.1\|WP_000488716.1\|4872963_4873659_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP018991.1\|WP_000491137.1\|4871649_4872549_-\|L-lysine-exporter-LysO	unknown	unknown	gnl\|CDD\|225287
NZ_CP018991.1\|WP_001202204.1\|4885084_4886806_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP018991.1\|WP_000599803.1\|4874083_4875742_+\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP018991.1\|WP_000934041.1\|4880874_4883151_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP018991.1\|WP_001295343.1\|4895098_4895710_+\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP018991.1\|WP_000410785.1\|4879976_4880201_-\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|77494
NZ_CP018991.1\|WP_001043561.1\|4886806_4888573_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP018991.1\|WP_000188152.1\|4877957_4879904_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP018991.1\|WP_000520781.1\|4880523_4880844_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP018991.1\|WP_001385255.1\|4888695_4889661_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP018991.1\|WP_000746478.1\|4876845_4877961_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP018991.1\|WP_000458841.1\|4869853_4871506_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP018991.1\|WP_000077041.1\|4890833_4894940_+\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP018991.1\|WP_001040187.1\|4883835_4884054_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP018991.1\|WP_001351020.1\|4875738_4876695_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|225537
NZ_CP018991.1\|WP_001241674.1\|4884338_4885043_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720

Protein	Function_ID	Function_description	E-value
NZ_CP018991.1\|WP_000886683.1\|4897154_4898447_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP018991.1\|WP_000228473.1\|4890204_4890699_+\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
NZ_CP018991.1\|WP_000067797.1\|4895720_4897064_+\|replication-associated-recombination-protein-RarA	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP018991.1\|WP_000488716.1\|4872963_4873659_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	7.82992e-144
NZ_CP018991.1\|WP_000491137.1\|4871649_4872549_-\|L-lysine-exporter-LysO	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	3.40497e-117
NZ_CP018991.1\|WP_001202204.1\|4885084_4886806_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP018991.1\|WP_000599803.1\|4874083_4875742_+\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP018991.1\|WP_000934041.1\|4880874_4883151_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP018991.1\|WP_001295343.1\|4895098_4895710_+\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125
NZ_CP018991.1\|WP_000410785.1\|4879976_4880201_-\|cold-shock-like-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
NZ_CP018991.1\|WP_001043561.1\|4886806_4888573_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP018991.1\|WP_000188152.1\|4877957_4879904_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP018991.1\|WP_000520781.1\|4880523_4880844_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
NZ_CP018991.1\|WP_001385255.1\|4888695_4889661_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP018991.1\|WP_000746478.1\|4876845_4877961_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP018991.1\|WP_000458841.1\|4869853_4871506_-\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP018991.1\|WP_000077041.1\|4890833_4894940_+\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP018991.1\|WP_001040187.1\|4883835_4884054_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP018991.1\|WP_001351020.1\|4875738_4876695_-\|DUF535-domain-containing-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	3.43529e-131
NZ_CP018991.1\|WP_001241674.1\|4884338_4885043_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.92039e-139

>NZ_CP018991.1|WP_000934041.1|4880874_4883151_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
>NZ_CP018991.1|WP_000520781.1|4880523_4880844_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NZ_CP018991.1|WP_000410785.1|4879976_4880201_-|cold-shock-like-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>NZ_CP018991.1|WP_000188152.1|4877957_4879904_+|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLEWKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNATGGTEPVVNTASGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE
>NZ_CP018991.1|WP_000746478.1|4876845_4877961_+|macrolide-transporter-subunit-MacA
MKKRKTVKKRYVIAMVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKINDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>NZ_CP018991.1|WP_001351020.1|4875738_4876695_-|DUF535-domain-containing-protein
MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAELTFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFCS
>NZ_CP018991.1|WP_000599803.1|4874083_4875742_+|ATP-dependent-endonuclease
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENIPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>NZ_CP018991.1|WP_000488716.1|4872963_4873659_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRN
>NZ_CP018991.1|WP_000491137.1|4871649_4872549_-|L-lysine-exporter-LysO
MFSGLLIILVPLIVGYLIPLRQKAALRVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSTTVILLCNIAALMWLERGLPWSNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>NZ_CP018991.1|WP_000458841.1|4869853_4871506_-|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIATLQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIIGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGEDFSAVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA
>NZ_CP018991.1|WP_001040187.1|4883835_4884054_-|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP018991.1|WP_001241674.1|4884338_4885043_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCDEFIRHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLSNNFWVPRCLFSPQE
>NZ_CP018991.1|WP_001202204.1|4885084_4886806_-|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPKVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGIYLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMCEKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>NZ_CP018991.1|WP_001043561.1|4886806_4888573_-|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLFLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQTALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGQIIEQGRYAELSVAGGPFATLLAHRQEEI
>NZ_CP018991.1|WP_001385255.1|4888695_4889661_-|thioredoxin-disulfide-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLTGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNTDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>NZ_CP018991.1|WP_000228473.1|4890204_4890699_+|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP018991.1|WP_000077041.1|4890833_4894940_+|DNA-translocase-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQSTVAWQPVPGPQTGEPVIAPAPEGYPQQPQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAAEQPVQQPYYATAAEQPAQQPYYAPAPEQAVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPTRPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNTEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAQQPQYQQPQQPVTQQPQYQQPQQPVVPQPQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>NZ_CP018991.1|WP_001295343.1|4895098_4895710_+|outer-membrane-lipoprotein-chaperone-LolA
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>NZ_CP018991.1|WP_000067797.1|4895720_4897064_+|replication-associated-recombination-protein-RarA
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAVGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>NZ_CP018991.1|WP_000886683.1|4897154_4898447_+|serine--tRNA-ligase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12111-12158	8	0.833
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	424237-424284	8	0.833
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7391-7438	10	0.792
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84215-84262	10	0.792
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87125-87172	10	0.792
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229237-229284	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229338-229385	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229439-229486	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239731-239778	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239832-239879	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239933-239980	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15006-15053	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230643-230690	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230744-230791	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230845-230892	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211613-211660	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211714-211761	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211815-211862	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31250-31297	11	0.771
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3371-3418	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4012-4059	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4113-4160	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208980-209027	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3370-3417	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4011-4058	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4112-4159	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219474-219521	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3370-3417	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4011-4058	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4112-4159	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210308-210355	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3370-3417	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4011-4058	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4112-4159	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191263-191310	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	270-317	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	101195-101242	12	0.75
NZ_CP018991_1	1.1\|4716426\|48\|NZ_CP018991\|CRISPRCasFinder	4716426-4716473	48	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	158-205	13	0.729

1. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 8, identity: 0.833

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccgaac	Protospacer
.* .********************* ****************   *.*

2. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.833

aaaccgtaggcctgataagacgcgcaagcgtcg-catcaggcaaacagc	CRISPR spacer
aacctgtaggcctgataagacgcgcaagcgtcgccatcaggcatctca-	Protospacer
** *.**************************** *********  . .

3. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  ..****** ************* ****************  *.**

4. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  ..****** ************* ****************  *.**

5. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
attttgtaggcctgataagacgcggcagcgtcgcatcaggcatcgtgc	Protospacer
*  ..*******************  ****************    **

6. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

7. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

8. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

9. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

10. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

11. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

12. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctggt	Protospacer
.. .******* ************* ****************  ..*.

13. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

14. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

15. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

16. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

17. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

18. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

19. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
cggctgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
 ..*.*******************  ****************   * .

20. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

21. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

22. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

23. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

24. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

25. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

26. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

27. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

28. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

29. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

30. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

31. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

32. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

33. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

34. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

35. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

36. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggtttgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
.. ..*******************  ****************   * .

37. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
taatacaaggcctgataagacgcgccagcgtcgcatcaggcgctgaat	Protospacer
 **.   ****************** ***************.   *..

38. spacer 1.1|4716426|48|NZ_CP018991|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 13, identity: 0.729

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gtctngtaggcctgataagacgcgtcagcgtcgcatcaggcttcaatt	Protospacer
.  . *******************. ***************    * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 12598

Escherichia_phage(36.36%)

tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001016257.1\|0_747_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
WP_071550361.1\|1208_4115_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0F7LDR4	Escherichia_phage	1.1e-118	45.9
WP_001164137.1\|4130_4658_+\|tail	tail fiber assembly protein	A0A0C4UR05	Shigella_phage	8.4e-73	77.7
WP_000972097.1\|4688_5222_-\|tail	tail fiber assembly protein	A0A077SL44	Escherichia_phage	1.8e-67	70.1
WP_022645053.1\|5223_6009_-	hypothetical protein	Q858V4	Yersinia_virus	1.3e-109	77.8
WP_001421220.1\|6236_6419_+	recombinase family protein	A0A0C4UR34	Shigella_phage	1.4e-24	95.0
WP_000240999.1\|6617_7286_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000937495.1\|7342_7612_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	9.3e-20	79.4
WP_000251936.1\|7726_7897_+	hypothetical protein	A0A0U2RK60	Escherichia_phage	9.4e-10	62.5
WP_001348267.1\|8023_8581_-	Rha family transcriptional regulator	Q8H9L9	Vibrio_phage	4.2e-30	63.8
WP_001296031.1\|8577_8853_-	ash family protein	S5MQL6	Escherichia_phage	1.1e-10	52.9
WP_000443082.1\|9228_10035_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_000209513.1\|10034_11228_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_001195273.1\|11239_12598_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	3.9e-37	41.2

DBSCAN-SWA_2

483195 : 578350

108

Enterobacteria_phage(49.25%)

terminase,portal,protease,tRNA,transposase,capsid,holin,lysis,tail,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000984517.1\|483195_484077_-\|protease	protease HtpX	NA	NA	NA	NA
WP_001055794.1\|484268_486317_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	6.8e-86	33.5
WP_000431388.1\|486336_487035_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_001029106.1\|487131_487629_-	L-methionine (R)-S-oxide reductase	NA	NA	NA	NA
WP_001531756.1\|487758_489042_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_001298452.1\|489010_491644_+	lipid-binding membrane homeostasis protein YebT	NA	NA	NA	NA
WP_001296139.1\|491723_493163_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_001295499.1\|493279_493516_+	DUF1480 family protein	NA	NA	NA	NA
WP_001296140.1\|493620_493812_+	YebW family protein	NA	NA	NA	NA
WP_000812745.1\|493812_494469_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	2.3e-56	50.2
WP_000976472.1\|494863_495205_-	YebY family protein	NA	NA	NA	NA
WP_000879317.1\|495217_496090_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_000168747.1\|496093_496468_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_000916763.1\|496606_496837_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.3e-14	61.8
WP_000011664.1\|496938_497595_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_000944256.1\|497618_498281_+	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	2.0e-07	41.6
WP_000936925.1\|498277_500338_-	oligopeptidase B	NA	NA	NA	NA
WP_000024724.1\|500546_501206_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_001295500.1\|501532_501889_-	protein YebF	NA	NA	NA	NA
WP_000257738.1\|501955_502246_-	DNA damage-inducible protein YebG	NA	NA	NA	NA
WP_000173466.1\|502379_503558_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_000800503.1\|503613_504255_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_001069461.1\|504291_506103_-	phosphogluconate dehydratase	NA	NA	NA	NA
WP_000301727.1\|506337_507813_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	4.4e-79	37.5
WP_001056695.1\|508150_509020_+	DNA-binding transcriptional regulator HexR	NA	NA	NA	NA
WP_000091149.1\|509147_510590_+	pyruvate kinase	NA	NA	NA	NA
WP_001296141.1\|510721_511693_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_001184045.1\|511811_513134_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.2e-14	40.9
WP_001347089.1\|513149_514082_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_000202996.1\|514160_514916_+	zinc ABC transporter ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	1.3e-18	28.3
WP_000571478.1\|514912_515698_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_099156422.1\|515891_517240_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	8.7e-74	52.4
WP_000568520.1\|517349_518360_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.6e-09	25.5
WP_000580323.1\|518368_518980_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_072093883.1\|519118_519184_-	hypothetical protein	NA	NA	NA	NA
WP_001024911.1\|519254_519857_+	YebB family permuted papain-like enzyme	NA	NA	NA	NA
WP_001295503.1\|519858_520380_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
WP_000907234.1\|520414_521155_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_077249130.1\|521183_521636_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_001258676.1\|521628_523401_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_000891625.1\|523710_524277_+	hydrolase	NA	NA	NA	NA
WP_000545005.1\|525095_525647_+	SLATT domain-containing protein	NA	NA	NA	NA
WP_029701056.1\|525624_526995_+	reverse transcriptase	NA	NA	NA	NA
WP_029701058.1\|527107_527692_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.5e-102	94.3
WP_000631346.1\|527700_528603_-	macro domain-containing protein	A0A0M4QWS3	Salmonella_phage	4.0e-99	63.9
WP_078175504.1\|528599_531626_-\|tail	prophage tail fiber N-terminal domain-containing protein	U5N099	Enterobacteria_phage	7.2e-68	82.1
WP_001228314.1\|531777_532377_-	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	9.1e-108	97.0
WP_122997661.1\|536260_536893_-\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	1.5e-100	94.3
WP_000194723.1\|536838_537582_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	5.0e-148	98.0
WP_033561175.1\|537592_538291_-\|tail	phage minor tail protein L	B6DZB1	Enterobacteria_phage	6.4e-129	96.1
WP_000847298.1\|538290_538620_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_023909007.1\|538616_541190_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	83.3
WP_000533402.1\|541170_541584_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_000479095.1\|541610_542042_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.2e-42	68.8
WP_000235110.1\|542055_542808_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.2e-133	98.4
WP_000683079.1\|542815_543211_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_001575631.1\|543207_543783_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.1e-49	57.8
WP_001402971.1\|543797_544151_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	9.6e-41	69.2
WP_000201501.1\|544143_544527_-	DNA-packaging protein FI	NA	NA	NA	NA
WP_000522601.1\|544578_545607_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.1e-113	62.2
WP_000256835.1\|545664_546012_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.9e-21	55.9
WP_001253935.1\|546048_547554_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.6e-100	53.5
WP_029701046.1\|547543_549136_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.2e-184	60.9
WP_029239038.1\|549132_549312_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	4.9e-09	58.2
WP_001348272.1\|549336_551265_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.6e-262	67.5
WP_001102145.1\|551236_551785_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	6.1e-58	82.7
WP_001329960.1\|552172_552358_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	3.2e-19	90.4
WP_000347013.1\|552490_552631_-	hypothetical protein	NA	NA	NA	NA
WP_001082546.1\|552981_553449_-\|lysis	lysis protein	Q9ZXB6	Enterobacteria_phage	3.4e-78	99.4
WP_000459345.1\|553450_553588_-	hypothetical protein	Q687G2	Enterobacteria_phage	1.3e-17	97.8
WP_016248004.1\|553747_554281_-	lysozyme	Q6H9V6	Enterobacteria_phage	2.5e-101	96.6
WP_000193280.1\|554344_554695_-	YdfR family protein	K7PGU6	Enterobacteria_phage	2.9e-37	95.2
WP_000284510.1\|554699_554915_-\|holin	class II holin family protein	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_000917767.1\|557098_557296_-	hypothetical protein	Q9MC00	Enterobacteria_phage	2.1e-29	100.0
WP_000209290.1\|557549_558707_+	DUF262 domain-containing protein	A0A0R6PJX3	Moraxella_phage	2.3e-59	37.4
WP_000052342.1\|558709_559399_+	hypothetical protein	NA	NA	NA	NA
WP_001025378.1\|559367_560408_-	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	9.3e-100	50.9
WP_001205451.1\|560471_560840_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	2.2e-56	90.0
WP_001520742.1\|560839_561097_-	hypothetical protein	Q8W639	Enterobacteria_phage	4.4e-35	100.0
WP_029700958.1\|561093_562494_-	replicative DNA helicase	Q8W640	Enterobacteria_phage	3.0e-250	93.9
WP_000988266.1\|562490_563390_-	ATP-binding protein	Q8W641	Enterobacteria_phage	2.3e-139	94.8
WP_000092417.1\|563400_564387_-	hypothetical protein	Q8W642	Enterobacteria_phage	1.7e-55	96.3
WP_000995578.1\|564383_564683_-	hypothetical protein	NA	NA	NA	NA
WP_000618007.1\|564679_564904_-	hypothetical protein	NA	NA	NA	NA
WP_000626792.1\|564900_565095_-	hypothetical protein	NA	NA	NA	NA
WP_029700955.1\|565091_565943_-	Rha family phage regulatory protein	Q8HA97	Salmonella_phage	1.9e-103	68.9
WP_029700954.1\|565939_566602_-	ash family protein	Q8W643	Enterobacteria_phage	4.7e-97	84.9
WP_001090259.1\|566710_567418_-	Rha family transcriptional regulator	Q8W645	Enterobacteria_phage	9.1e-107	86.0
WP_000838344.1\|567753_568410_+	helix-turn-helix domain-containing protein	Q8W648	Enterobacteria_phage	3.1e-125	97.7
WP_000608402.1\|568513_569017_+	helix-turn-helix domain-containing protein	Q8W649	Enterobacteria_phage	1.2e-63	95.5
WP_021519722.1\|569304_569511_+	hypothetical protein	Q8W651	Enterobacteria_phage	2.0e-30	95.6
WP_021519723.1\|569705_569888_+	hypothetical protein	Q8W652	Enterobacteria_phage	2.9e-09	50.9
WP_001199104.1\|569893_570475_+	hypothetical protein	Q8W653	Enterobacteria_phage	1.9e-70	65.1
WP_000179800.1\|570723_571041_+	DUF4752 family protein	A0A1I9LJV1	Stx_converting_phage	5.2e-38	82.6
WP_021519724.1\|570994_571309_+	hypothetical protein	B1GS43	Salmonella_phage	2.8e-39	86.0
WP_021519725.1\|571295_572111_+	ead/Ea22-like family protein	A0A2I6TD51	Escherichia_phage	1.3e-141	96.4
WP_021519726.1\|572112_572523_+	hypothetical protein	C6ZR27	Salmonella_phage	2.7e-18	49.6
WP_000224227.1\|572524_572788_+	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
WP_021519727.1\|572798_572966_+	hypothetical protein	A0A192Y7X3	Salmonella_phage	3.6e-14	80.8
WP_021519728.1\|572962_573307_+	hypothetical protein	A0A2R2Z2X8	Escherichia_phage	1.4e-57	98.2
WP_000457723.1\|573391_573634_+	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	4.3e-32	87.5
WP_001030156.1\|573637_573784_+	hypothetical protein	A0A1B5FPC2	Escherichia_phage	1.6e-21	93.8
WP_000528718.1\|573792_574029_+	excisionase family protein	Q8W657	Enterobacteria_phage	6.4e-41	100.0
WP_000362005.1\|574084_575398_+	DUF3596 domain-containing protein	Q8W658	Enterobacteria_phage	4.1e-246	95.6
WP_042040108.1\|575379_576150_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.1e-72	99.2
WP_000252980.1\|576202_576598_+	MAPEG family protein	NA	NA	NA	NA
WP_000019588.1\|576638_577382_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
WP_000564759.1\|577378_578350_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA

DBSCAN-SWA_3

583869 : 638965

Escherichia_phage(30.77%)

terminase,portal,tRNA,capsid,holin,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001025326.1\|583869_585603_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	8.8e-87	33.7
WP_001202076.1\|585655_586048_-	flagellar protein FlhE	NA	NA	NA	NA
WP_000066973.1\|586047_588126_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_001278946.1\|588118_589267_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_000983600.1\|589455_590100_-	protein phosphatase CheZ	NA	NA	NA	NA
WP_000763867.1\|590110_590500_-	chemotaxis protein CheY	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
WP_000036371.1\|590514_591564_-	protein-glutamate methylesterase/protein glutamine deamidase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
WP_000204320.1\|591566_592427_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_001296146.1\|592717_594379_-	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-10	40.3
WP_000147302.1\|594523_595027_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_001531763.1\|595047_597012_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_000795641.1\|597016_597943_-	flagellar motor protein MotB	NA	NA	NA	NA
WP_000906342.1\|597939_598827_-	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_001291603.1\|598953_599532_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_001295647.1\|599534_599885_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_000122413.1\|600664_601093_+	universal stress protein UspC	NA	NA	NA	NA
WP_001296148.1\|601099_602524_-	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
WP_001296149.1\|602498_603299_-	trehalose-phosphatase	NA	NA	NA	NA
WP_000100203.1\|603465_604452_-	arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_001187827.1\|604466_605981_-	arabinose ABC transporter ATP binding protein AraG	A0A285PWH2	Cedratvirus	1.3e-12	29.7
WP_000548680.1\|606050_607040_-	arabinose ABC transporter substrate-binding protein AraF	NA	NA	NA	NA
WP_000179469.1\|607834_608338_+	non-heme ferritin-like protein	NA	NA	NA	NA
WP_000082127.1\|608415_608667_-	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_010723106.1\|608781_608868_-	stress response protein AzuC	NA	NA	NA	NA
WP_001237881.1\|609131_609455_+	hypothetical protein	NA	NA	NA	NA
WP_000917208.1\|609626_610124_+	non-heme ferritin	NA	NA	NA	NA
WP_000377224.1\|610161_610401_-	YecH family protein	NA	NA	NA	NA
WP_000797555.1\|610591_611803_+	tyrosine transporter TyrP	NA	NA	NA	NA
WP_000847882.1\|611853_612519_-	UPF0149 family protein YecA	NA	NA	NA	NA
WP_001296152.1\|612990_613410_-	hypothetical protein	G8C7Q7	Escherichia_phage	1.8e-49	68.8
WP_001531767.1\|614624_614849_-\|tail	tail protein X	NA	NA	NA	NA
WP_001531768.1\|615010_615400_-\|tail	phage tail protein	E5FFG4	Burkholderia_phage	1.0e-14	37.9
WP_001018353.1\|615435_617076_-	hypothetical protein	A0A2I7R3J9	Vibrio_phage	1.2e-19	29.3
WP_000444667.1\|617184_617466_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000785563.1\|617478_617991_-\|tail	phage major tail tube protein	NA	NA	NA	NA
WP_000117510.1\|618008_619511_-\|tail	phage tail sheath subtilisin-like domain-containing protein	R9TMQ0	Vibrio_phage	5.5e-69	33.5
WP_000626358.1\|619507_619897_-	hypothetical protein	A0A2H4EXG4	Aeromonas_phage	9.4e-05	30.8
WP_000829621.1\|619896_621081_-\|tail	phage tail protein	J9QDX3	Clostridium_phage	2.5e-16	35.2
WP_000203868.1\|621073_621700_-\|tail	phage tail protein I	A0A193GYD1	Enterobacter_phage	2.0e-25	38.8
WP_000633314.1\|621702_622623_-\|plate	baseplate J/gp47 family protein	D5LGZ3	Escherichia_phage	6.4e-68	47.8
WP_000901289.1\|622619_622961_-	GPW/gp25 family protein	D4HTV2	Vibrio_phage	1.1e-20	51.6
WP_000079174.1\|622963_623866_-\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_000015612.1\|623846_624383_-	hypothetical protein	NA	NA	NA	NA
WP_000774516.1\|624379_625060_-	hypothetical protein	NA	NA	NA	NA
WP_001531773.1\|625091_625472_-	hypothetical protein	NA	NA	NA	NA
WP_000105179.1\|625468_625888_-	DNA-packaging protein	NA	NA	NA	NA
WP_001283997.1\|625922_626957_-\|capsid	major capsid protein	A0A2I6TCE5	Escherichia_phage	6.6e-106	56.5
WP_000206292.1\|627015_627345_-	hypothetical protein	A0A2R9YJN3	Escherichia_phage	2.0e-08	39.5
WP_001145892.1\|627344_628652_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	4.9e-106	53.7
WP_000126513.1\|628651_630226_-\|portal	phage portal protein	E4WL21	Enterobacteria_phage	8.6e-190	64.0
WP_000203897.1\|630222_630456_-	hypothetical protein	NA	NA	NA	NA
WP_000148195.1\|630455_632318_-\|terminase	phage terminase large subunit family protein	A0A1I9KF19	Aeromonas_phage	1.1e-191	53.2
WP_000168117.1\|632304_632871_-	hypothetical protein	A0A1I9KFT4	Aeromonas_phage	2.9e-31	46.2
WP_001531775.1\|633239_633485_+	hypothetical protein	NA	NA	NA	NA
WP_000734931.1\|633544_633739_-	hypothetical protein	NA	NA	NA	NA
WP_000131873.1\|633746_634226_-	TIGR02594 family protein	A0A222YWL8	Escherichia_phage	4.6e-62	68.8
WP_000172496.1\|634225_634498_-\|holin	phage holin family protein	A0A0A0YPY6	Escherichia_phage	9.8e-09	42.9
WP_001294589.1\|634497_634881_-	hypothetical protein	NA	NA	NA	NA
WP_000064384.1\|634993_635665_-	antitermination protein	Q7Y3X2	Yersinia_phage	1.9e-16	33.5
WP_000717783.1\|635664_635958_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	3.3e-34	70.5
WP_000057010.1\|635954_636551_-	DUF1367 family protein	H9C173	Pectobacterium_phage	1.5e-70	64.1
WP_001025459.1\|636628_636808_-	hypothetical protein	NA	NA	NA	NA
WP_000847617.1\|636959_637601_-	hypothetical protein	NA	NA	NA	NA
WP_000536919.1\|637844_638078_+	hypothetical protein	NA	NA	NA	NA
WP_000224749.1\|638476_638965_+	ImmA/IrrE family metallo-endopeptidase	A0A142KB62	Gordonia_phage	6.4e-27	42.7

DBSCAN-SWA_4

643026 : 655195

Pectobacterium_phage(66.67%)

integrase

attL 653056:653070|attR 659808:659822

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001531776.1\|643026_643815_-	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	1.1e-39	69.8
WP_000661082.1\|644496_644721_-	hypothetical protein	NA	NA	NA	NA
WP_000875806.1\|644717_645029_-	hypothetical protein	A0A222YXX1	Escherichia_phage	1.2e-34	65.7
WP_000918616.1\|645025_645262_-	hypothetical protein	NA	NA	NA	NA
WP_000214056.1\|645263_645674_-	hypothetical protein	NA	NA	NA	NA
WP_000609322.1\|645712_647128_-	AAA family ATPase	H9C165	Pectobacterium_phage	6.6e-173	66.7
WP_001023813.1\|647117_647873_-	hypothetical protein	H9C164	Pectobacterium_phage	2.4e-41	68.5
WP_000943914.1\|647869_648094_-	hypothetical protein	H9C163	Pectobacterium_phage	6.1e-17	54.1
WP_000431205.1\|648133_648610_-	hypothetical protein	H9C162	Pectobacterium_phage	1.9e-23	48.6
WP_000360804.1\|648668_648899_-	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	1.5e-21	63.2
WP_001296165.1\|648997_649411_+	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	8.7e-09	49.1
WP_000388260.1\|650421_650742_+	hypothetical protein	NA	NA	NA	NA
WP_000151806.1\|650772_652989_+	hypothetical protein	H9C157	Pectobacterium_phage	4.7e-101	35.6
WP_078175506.1\|652985_653555_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	6.1e-37	49.2
653056:653070	attL	NA	NA	NA	NA
WP_000916334.1\|653554_653737_+	hypothetical protein	NA	NA	NA	NA
WP_000833838.1\|653946_654210_+	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	1.2e-06	38.0
WP_001531780.1\|654178_655195_+\|integrase	tyrosine-type recombinase/integrase	H9C152	Pectobacterium_phage	1.1e-126	63.6
659808:659822	attR	NA	NA	NA	NA

DBSCAN-SWA_5

673439 : 750348

Shigella_phage(33.33%)

terminase,portal,protease,transposase,integrase,capsid,holin,plate,lysis,tail,head

attL 714628:714643|attR 753022:753037

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001347174.1\|673439_673964_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.2e-33	60.0
WP_000879824.1\|674120_674918_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_078175508.1\|674927_675479_-	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA
WP_001070440.1\|675647_675980_-	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_001274299.1\|676323_676638_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_000994425.1\|676852_678511_+	flagellar M-ring protein FliF	NA	NA	NA	NA
WP_000067950.1\|678503_679499_+	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_001282677.1\|679491_680178_+	flagellar assembly protein FliH	NA	NA	NA	NA
WP_000213308.1\|680177_681551_+	flagellum-specific ATP synthase FliI	NA	NA	NA	NA
WP_000807584.1\|681569_682013_+	flagella biosynthesis chaperone FliJ	NA	NA	NA	NA
WP_000620069.1\|682009_683137_+	flagellar hook length control protein FliK	NA	NA	NA	NA
WP_000133106.1\|683241_683706_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_001295641.1\|683710_684715_+	flagellar motor switch protein FliM	NA	NA	NA	NA
WP_001282103.1\|684711_685125_+	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_001313947.1\|685127_685493_+	flagellar type III secretion system protein FliO	NA	NA	NA	NA
WP_001253318.1\|685492_686230_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_000187358.1\|686239_686509_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_000983988.1\|686517_687303_+	flagellar type III secretion system protein FliR	NA	NA	NA	NA
WP_000103992.1\|687592_688216_+	transcriptional regulator RcsA	NA	NA	NA	NA
WP_000867217.1\|688259_688448_-	protein DsrB	NA	NA	NA	NA
WP_000844800.1\|688610_688838_+	peroxide/acid resistance protein YodD	NA	NA	NA	NA
WP_000491527.1\|689133_689949_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
WP_001531784.1\|689945_691640_-	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	1.3e-18	35.6
WP_000009307.1\|691810_691993_-	DUF2158 domain-containing protein	NA	NA	NA	NA
WP_000922683.1\|692071_692989_-	DUF808 domain-containing protein	NA	NA	NA	NA
WP_001212226.1\|693161_694082_+	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_000228686.1\|694070_694541_-	VSPR family DNA mismatch endonuclease	E5E3X5	Burkholderia_phage	5.2e-34	48.3
WP_001157265.1\|694521_695940_-	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-101	55.1
WP_001296176.1\|696006_696702_-	phosphohydrolase	S4W232	Pandoravirus	1.6e-07	28.7
WP_001330593.1\|696741_697107_-	hypothetical protein	NA	NA	NA	NA
WP_000824383.1\|697672_698788_+	porin	Q1MVN1	Enterobacteria_phage	2.9e-91	47.4
WP_000218217.1\|699380_700232_+	protein deglycase HchA	NA	NA	NA	NA
WP_000826711.1\|700339_701698_-	two-component system sensor histidine kinase HprS	NA	NA	NA	NA
WP_001347103.1\|701697_702369_-	response regulator transcription factor HprR	W8CYM9	Bacillus_phage	5.4e-32	35.2
WP_000920127.1\|702501_702915_+	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_000740067.1\|703023_704028_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_001240063.1\|704028_704664_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_099156434.1\|704747_706096_-\|transposase	IS3-like element IS1397 family transposase	A0A1B1P773	Bacillus_phage	1.3e-74	52.4
WP_001007778.1\|706356_707007_+	metal-binding protein ZinT	NA	NA	NA	NA
WP_021562679.1\|708466_710842_-\|tail	tail fiber domain-containing protein	O22004	Shigella_phage	1.1e-47	71.8
WP_001566758.1\|710845_711430_-	YmfQ family protein	O22003	Shigella_phage	4.6e-112	99.0
WP_001566759.1\|711420_712479_-\|plate	baseplate J/gp47 family protein	M1FQW3	Enterobacteria_phage	2.5e-201	99.1
WP_000424732.1\|712465_712891_-	phage GP46 family protein	U5P0R9	Shigella_phage	2.3e-81	100.0
WP_021562678.1\|712890_713439_-\|plate	phage baseplate assembly protein	U5P081	Shigella_phage	3.3e-96	98.4
WP_001566762.1\|713438_714518_-	hypothetical protein	U5P0H6	Shigella_phage	7.7e-206	99.4
WP_001566763.1\|714514_715888_-	DNA circularization N-terminal domain-containing protein	U5P4I0	Shigella_phage	1.5e-243	97.3
714628:714643	attL	NA	NA	NA	NA
WP_001566765.1\|715944_716433_-	hypothetical protein	NA	NA	NA	NA
WP_001566766.1\|716497_718399_-\|tail	phage tail tape measure protein	U5P420	Shigella_phage	0.0e+00	99.1
WP_000571713.1\|718483_718807_-\|tail	phage tail assembly protein	U5P0R5	Shigella_phage	1.1e-51	99.1
WP_000090998.1\|718803_719160_-\|tail	phage tail tube protein	U5P076	Shigella_phage	5.3e-63	100.0
WP_001566767.1\|719159_720656_-\|tail	phage tail sheath subtilisin-like domain-containing protein	S5FKL0	Shigella_phage	7.5e-276	98.8
WP_000497751.1\|720639_720810_-	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	9.3e-26	100.0
WP_001566768.1\|720818_721379_-	hypothetical protein	M1FQV7	Enterobacteria_phage	9.8e-104	97.8
WP_000224835.1\|721375_721882_-	hypothetical protein	M1FPE2	Enterobacteria_phage	1.3e-83	92.9
WP_001566769.1\|721856_722267_-\|head	phage head closure protein	M1FJ87	Enterobacteria_phage	2.2e-68	92.6
WP_000924830.1\|722263_722587_-\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	2.2e-52	99.1
WP_001566770.1\|722664_723882_-\|capsid	phage major capsid protein	A0A1W6JP20	Morganella_phage	2.2e-161	71.6
WP_000999828.1\|723896_724496_-\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.9e-89	81.0
WP_001566771.1\|724488_725715_-\|portal	phage portal protein	Q8SBI0	Shigella_phage	3.0e-230	95.3
WP_001566773.1\|725704_725866_-	hypothetical protein	NA	NA	NA	NA
WP_064760988.1\|725862_727359_-\|terminase	terminase large subunit	A0A1C9IIA1	Salmonella_phage	4.1e-290	98.8
WP_001566775.1\|727592_728087_-\|terminase	phage terminase small subunit P27 family	U5P067	Shigella_phage	1.6e-86	97.6
WP_001566776.1\|728212_728563_-	HNH endonuclease	M1FQV2	Enterobacteria_phage	2.1e-64	98.3
WP_071813842.1\|728634_728979_-	DUF2441 domain-containing protein	I6PCV9	Cronobacter_phage	5.9e-27	47.3
WP_000092300.1\|729348_729816_-\|lysis	lysis protein	A0A192Y689	Salmonella_phage	1.8e-66	84.5
WP_001166530.1\|729812_730289_-	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	8.6e-85	97.4
WP_001120503.1\|730292_730628_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	5.7e-59	98.2
WP_021562676.1\|730724_732116_-	ATP-binding protein	NA	NA	NA	NA
WP_021562675.1\|732255_732834_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	6.2e-45	53.3
WP_078175510.1\|732848_733841_-	DUF968 domain-containing protein	S5FV02	Shigella_phage	2.3e-156	80.6
WP_001405664.1\|733842_734121_-	hypothetical protein	A0A077KB22	Edwardsiella_phage	5.1e-05	37.1
WP_000980988.1\|734187_734439_-	hypothetical protein	NA	NA	NA	NA
WP_000813254.1\|734655_734811_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_001289994.1\|735369_735885_-	hypothetical protein	A0A076GCN9	Escherichia_phage	1.2e-36	77.6
WP_000753058.1\|735881_736058_-	hypothetical protein	A0A2R2X2A8	Escherichia_phage	4.3e-26	93.1
WP_029701087.1\|736050_736233_-	hypothetical protein	A0A2R2Z308	Escherichia_phage	3.1e-27	98.3
WP_000403778.1\|736326_736683_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	1.1e-57	98.3
WP_001209471.1\|736660_737122_-	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	3.8e-37	91.7
WP_001266130.1\|737118_737415_-	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	1.2e-47	95.8
WP_001141099.1\|737411_737804_-	DUF977 family protein	A0A088CBK9	Shigella_phage	1.5e-39	63.3
WP_042091266.1\|737819_738590_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.8e-87	68.8
WP_001309414.1\|738623_739166_-	hypothetical protein	A0A0U2JGJ0	Escherichia_phage	3.6e-79	90.2
WP_021562672.1\|739077_740118_-	hypothetical protein	A0A0U2RT81	Escherichia_phage	5.1e-90	86.7
WP_000705383.1\|740089_740641_-	hypothetical protein	NA	NA	NA	NA
WP_000912294.1\|740624_740852_-	transcriptional regulator	NA	NA	NA	NA
WP_000787428.1\|740928_741336_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	9.8e-29	49.6
WP_021562670.1\|741543_741696_+	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_021562669.1\|741707_742082_+	hypothetical protein	NA	NA	NA	NA
WP_000935598.1\|742620_743475_+	Rha family phage regulatory protein	A0A0P0ZE80	Stx2-converting_phage	2.1e-65	63.2
WP_000450218.1\|743485_743674_+	cell division inhibitor	NA	NA	NA	NA
WP_021562668.1\|743670_743874_+	DUF1482 family protein	NA	NA	NA	NA
WP_021562667.1\|743953_746428_+	exonuclease	K7PLW7	Enterobacteria_phage	2.7e-57	58.2
WP_021562666.1\|746486_746690_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_021562665.1\|746689_747715_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	3.4e-102	57.9
WP_001311896.1\|747950_748748_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_000060157.1\|749085_750348_+\|integrase	tyrosine-type recombinase/integrase	A0A1B0VMI6	Pseudomonas_phage	2.6e-72	38.5
753022:753037	attR	NA	NA	NA	NA

DBSCAN-SWA_6

817237 : 930452

147

Enterobacteria_phage(31.68%)

terminase,portal,protease,coat,transposase,integrase,holin,capsid,plate,lysis,tail,head

attL 855042:855059|attR 928393:928410

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001296203.1\|817237_818434_+\|transposase	IS110-like element ISEc20 family transposase	NA	NA	NA	NA
WP_001304240.1\|818557_818836_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_000813432.1\|818929_819532_+	hypothetical protein	NA	NA	NA	NA
WP_001327829.1\|820005_820221_+	hypothetical protein	NA	NA	NA	NA
WP_000970353.1\|820557_821250_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.7e-118	88.4
WP_000255956.1\|821249_822272_-\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.0e-199	99.1
WP_001296206.1\|823796_824942_+	hypothetical protein	NA	NA	NA	NA
WP_000422741.1\|825221_825647_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
WP_000624722.1\|825643_825994_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_000080195.1\|826024_827638_+\|transposase	IS66-like element ISEc23 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
WP_001163787.1\|828012_828270_-	hypothetical protein	NA	NA	NA	NA
WP_000016207.1\|828323_829091_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.5e-14	27.9
WP_000217077.1\|829087_830146_-	iron ABC transporter permease	NA	NA	NA	NA
WP_000778018.1\|830164_831154_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000856948.1\|831164_833330_-	TonB-dependent receptor	NA	NA	NA	NA
WP_001069649.1\|833758_834193_+	hypothetical protein	NA	NA	NA	NA
WP_001531797.1\|834410_836795_+	dynamin family protein	NA	NA	NA	NA
WP_000203551.1\|836791_837697_+	chemotaxis protein	NA	NA	NA	NA
WP_000102633.1\|837693_838764_+	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_001298859.1\|839427_840969_+\|transposase	IS21-like element ISEc12 family transposase	K4I413	Acidithiobacillus_phage	1.7e-129	46.4
WP_001016257.1\|840983_841730_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
WP_000846703.1\|842178_842589_+	hypothetical protein	NA	NA	NA	NA
WP_001542275.1\|842809_843628_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	8.8e-45	38.6
WP_001164966.1\|843627_843873_+	hypothetical protein	NA	NA	NA	NA
WP_001542276.1\|843966_844440_+	antirestriction protein	A0A2D0W9W4	Bordetella_phage	4.3e-12	33.1
WP_001186200.1\|844455_844932_+	RadC family protein	NA	NA	NA	NA
WP_000692345.1\|844994_845216_+	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
WP_001573286.1\|845623_846271_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000989761.1\|846439_846676_+	helix-turn-helix domain-containing protein	M1PVU4	Vibrio_phage	1.8e-14	57.4
WP_060589422.1\|846675_848718_+\|transposase	Mu transposase C-terminal domain-containing protein	A0A2D1GNK9	Pseudomonas_phage	2.5e-173	48.8
WP_060589421.1\|848736_849630_+	AAA family ATPase	A0A2D1GNS0	Pseudomonas_phage	6.8e-91	57.3
WP_000361028.1\|849644_849869_+	hypothetical protein	NA	NA	NA	NA
WP_001402685.1\|849881_850097_+	hypothetical protein	NA	NA	NA	NA
WP_060589420.1\|850126_850771_+	DUF3164 family protein	Q6QIE4	Burkholderia_phage	1.7e-75	69.3
WP_060589419.1\|850772_851006_+	ANR family transcriptional regulator	NA	NA	NA	NA
WP_060589418.1\|850986_851178_+	hypothetical protein	A0A2D1GNV5	Pseudomonas_phage	3.6e-10	53.3
WP_000117574.1\|851258_851645_+	hypothetical protein	U5PRY6	Bacillus_phage	1.1e-21	47.9
WP_060589417.1\|851708_852437_+	DUF2786 domain-containing protein	NA	NA	NA	NA
WP_000687524.1\|852650_852881_+	hypothetical protein	NA	NA	NA	NA
WP_060589416.1\|852870_853161_+	DUF4752 family protein	A0A088CD82	Shigella_phage	2.6e-23	61.7
WP_060589415.1\|853157_853466_+	hypothetical protein	NA	NA	NA	NA
WP_029392801.1\|853635_853815_+	hypothetical protein	NA	NA	NA	NA
WP_060589414.1\|853827_854238_+	hypothetical protein	A0A076G6X8	Escherichia_phage	8.3e-28	70.6
WP_060589413.1\|854392_854671_+	hypothetical protein	NA	NA	NA	NA
WP_060589412.1\|854642_855041_+	regulatory protein GemA	A0A2D1GNN4	Pseudomonas_phage	6.0e-39	62.8
WP_000976762.1\|855037_855514_+	hypothetical protein	NA	NA	NA	NA
855042:855059	attL	NA	NA	NA	NA
WP_032082855.1\|855614_856082_+	mor transcription activator family protein	A0A0M3LRS6	Mannheimia_phage	4.0e-18	33.3
WP_060589411.1\|856107_856386_+	hypothetical protein	NA	NA	NA	NA
WP_001372993.1\|856568_856961_+\|holin	phage holin family protein	Q9MBZ5	Enterobacteria_phage	1.6e-28	55.7
WP_021536556.1\|856950_857247_+\|holin	phage holin family protein	A0A0U2SHD1	Escherichia_phage	6.2e-17	50.5
WP_060589410.1\|857230_857776_+	glycoside hydrolase family 108 protein	A0A0U2S643	Escherichia_phage	4.9e-92	86.2
WP_000198194.1\|857772_857955_+	hypothetical protein	NA	NA	NA	NA
WP_021536554.1\|857975_858182_+	hypothetical protein	NA	NA	NA	NA
WP_000312575.1\|858181_858682_+	DUF1804 family protein	A0A0M3VI86	Ralstonia_phage	4.4e-39	47.8
WP_021536553.1\|858728_859469_+	site-specific DNA-methyltransferase	Q775B4	Bordetella_phage	4.1e-65	51.9
WP_060589409.1\|859470_861111_+\|terminase	phage terminase large subunit	B7SDN0	Haemophilus_phage	1.7e-193	63.3
WP_060589408.1\|861114_862710_+	DUF935 domain-containing protein	L7P7P3	Pseudomonas_phage	3.5e-122	45.7
WP_060589407.1\|862696_863863_+\|capsid	minor capsid protein	Q6QIB9	Burkholderia_phage	1.5e-61	45.7
WP_060589406.1\|863859_864411_+	phage virion morphogenesis protein	A0A0M3LSP9	Mannheimia_phage	3.1e-09	30.1
WP_060589423.1\|864620_865736_+\|protease	phage protease	A0A0M5N0Q6	Ralstonia_phage	1.5e-50	38.7
WP_000375807.1\|865736_866132_+	hypothetical protein	A0A2H4IZH5	uncultured_Caudovirales_phage	7.0e-16	37.0
WP_000960879.1\|866142_867051_+\|head	Mu-like prophage major head subunit gpT family protein	A0A2H4J778	uncultured_Caudovirales_phage	7.4e-101	60.0
WP_000416602.1\|867054_867396_+	hypothetical protein	NA	NA	NA	NA
WP_000119400.1\|867399_867831_+	DUF1320 family protein	A0A1X9SGZ3	Bradyrhizobium_phage	7.0e-09	27.4
WP_071782311.1\|867827_868466_+	DUF1834 family protein	A0A0M3LQJ7	Mannheimia_phage	1.4e-26	38.3
WP_000671672.1\|868479_868680_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_047660067.1\|868672_870094_+\|tail	phage tail sheath subtilisin-like domain-containing protein	B7SDP8	Haemophilus_phage	3.2e-95	44.9
WP_000053464.1\|870106_870481_+	hypothetical protein	F6MIK8	Haemophilus_phage	2.3e-32	61.2
WP_000152396.1\|870477_870861_+	hypothetical protein	NA	NA	NA	NA
WP_000178828.1\|870875_871034_+	hypothetical protein	NA	NA	NA	NA
WP_060589405.1\|871023_873297_+\|tail	phage tail tape measure protein	A0A0M3LPB6	Mannheimia_phage	9.5e-81	35.5
WP_060589404.1\|873296_874646_+	DNA circularization N-terminal domain-containing protein	F6MIL2	Haemophilus_phage	1.7e-37	26.8
WP_001573291.1\|874629_875841_+	hypothetical protein	A0A2H4J9E6	uncultured_Caudovirales_phage	1.5e-69	37.8
WP_001573292.1\|875840_876491_+\|plate	phage baseplate assembly protein V	F6MIL4	Haemophilus_phage	9.4e-42	48.8
WP_060589403.1\|876544_876895_+	phage GP46 family protein	A0A2H4JDR8	uncultured_Caudovirales_phage	8.1e-32	63.8
WP_060589402.1\|876894_877974_+\|plate	baseplate J/gp47 family protein	A0A0M3LQN4	Mannheimia_phage	2.9e-72	44.1
WP_060589401.1\|877977_878550_+	DUF2313 domain-containing protein	F6MIL7	Haemophilus_phage	1.6e-29	38.2
WP_060589400.1\|878549_880928_+\|tail	tail fiber domain-containing protein	A0A0A0YWB2	Escherichia_phage	2.2e-27	39.9
WP_153302171.1\|881101_881701_+	antitoxin of toxin-antitoxin stability system	A0A2I6PI07	Pseudomonas_phage	2.2e-21	33.8
WP_001280918.1\|881716_882085_+	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_000854815.1\|882173_882548_+	type IV toxin-antitoxin system toxin CbtA	NA	NA	NA	NA
WP_000988600.1\|882544_882739_+	hypothetical protein	NA	NA	NA	NA
WP_001161660.1\|882751_882865_+	DUF957 domain-containing protein	NA	NA	NA	NA
WP_001296208.1\|883353_883536_+	hypothetical protein	NA	NA	NA	NA
WP_000450409.1\|883636_883966_-	DUF496 family protein	NA	NA	NA	NA
WP_001200889.1\|884137_885196_-	FUSC family protein	NA	NA	NA	NA
WP_001105368.1\|885393_885867_-	DNA gyrase inhibitor SbmC	NA	NA	NA	NA
WP_001296209.1\|885985_887152_-	serine-type D-Ala-D-Ala carboxypeptidase DacD	B6DZZ7	Stx2-converting_phage	5.9e-228	99.5
WP_029700934.1\|890236_891139_-	antirepressor	Q0H8C7	Salmonella_phage	2.5e-170	97.7
WP_000868958.1\|891201_891426_-	hypothetical protein	NA	NA	NA	NA
WP_001555391.1\|891422_891581_-	Arc family DNA-binding protein	I6S1K8	Salmonella_phage	9.3e-20	92.3
WP_029700933.1\|891671_891926_+	Arc family DNA-binding protein	A5VW60	Enterobacteria_phage	2.0e-32	88.6
WP_000749484.1\|891975_892695_+	hypothetical protein	NA	NA	NA	NA
WP_001263856.1\|892685_893234_+	PIN domain-containing protein	NA	NA	NA	NA
WP_000467047.1\|893361_893784_+	hypothetical protein	NA	NA	NA	NA
WP_029700931.1\|893808_895917_-	hypothetical protein	Q9AYY9	Salmonella_phage	1.2e-284	84.1
WP_085949154.1\|896464_897611_+\|transposase	IS3-like element ISEc52 family transposase	Q716C2	Shigella_phage	2.4e-173	96.3
WP_000964872.1\|898454_899147_-	DNA transfer protein	A5VW66	Enterobacteria_phage	5.8e-114	97.8
WP_029700927.1\|899149_899605_-	DUF2824 family protein	A0A2D1GLX4	Escherichia_phage	7.4e-86	98.7
WP_029700925.1\|899604_900306_-\|tail	tail protein	A5VW68	Enterobacteria_phage	6.2e-116	96.1
WP_029700923.1\|900305_901724_-	packaged DNA stabilization protein gp10	Q716G7	Shigella_phage	4.2e-276	99.6
WP_001140510.1\|901733_902195_-\|head	head DNA stabilization protein	A5VW70	Enterobacteria_phage	7.1e-84	100.0
WP_001389518.1\|902175_902364_-	hypothetical protein	A0A088CPR7	Enterobacteria_phage	2.9e-28	100.0
WP_029700919.1\|902405_903659_-\|coat	coat protein	A0A088CQ56	Enterobacteria_phage	7.7e-234	98.3
WP_000372575.1\|903677_904571_-	scaffold protein	A0A088CPT0	Enterobacteria_phage	4.3e-130	99.0
WP_029700917.1\|904661_906860_-\|portal	portal protein	A0A088CQ69	Enterobacteria_phage	0.0e+00	97.3
WP_029700916.1\|906861_908277_-\|terminase	PBSX family phage terminase large subunit	A5VW75	Enterobacteria_phage	1.6e-275	98.9
WP_000113732.1\|908273_908714_-	hypothetical protein	C7U0V7	Enterobacteria_phage	1.7e-79	99.3
WP_000807788.1\|908716_908959_-	DUF2560 family protein	A5VW77	Enterobacteria_phage	1.3e-36	100.0
WP_004015017.1\|909186_909729_-	Rha family transcriptional regulator	A0A088CBJ5	Shigella_phage	3.1e-91	91.7
WP_029700910.1\|909931_910369_-\|lysis	lysis protein	A0A2I6PIF7	Escherichia_phage	1.0e-71	99.3
WP_000229392.1\|910365_910842_-	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	1.7e-88	100.0
WP_000783734.1\|910825_911149_-\|holin	phage holin, lambda family	G5DA93	Enterobacteria_phage	1.3e-52	100.0
WP_029700909.1\|911613_912132_-	DUF1133 family protein	A5VW83	Enterobacteria_phage	4.5e-95	98.3
WP_029700907.1\|912122_912794_-	serine/threonine protein phosphatase	K7PJY0	Enterobacterial_phage	5.0e-131	99.1
WP_000144614.1\|912771_912978_-	protein ninH	Q716C0	Shigella_phage	7.3e-33	100.0
WP_021571394.1\|912974_913586_-	recombination protein NinG	A0A088CQ20	Enterobacteria_phage	6.0e-99	99.5
WP_000237096.1\|913578_913971_-	hypothetical protein	A0A077SL57	Escherichia_phage	5.9e-15	36.1
WP_029700905.1\|913960_914140_-	protein ninF	G9L691	Escherichia_phage	1.3e-25	100.0
WP_029700904.1\|914132_914498_-	DUF2591 family protein	G8EYI2	Enterobacteria_phage	3.3e-60	94.8
WP_001254220.1\|914500_914677_-	NinE family protein	K7PHE6	Enterobacteria_phage	2.7e-28	100.0
WP_000736913.1\|914673_915114_-	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.2e-80	100.0
WP_029700902.1\|915191_917072_-	toprim domain-containing protein	K7PK08	Enterobacteria_phage	0.0e+00	99.8
WP_029700901.1\|917179_918040_-	replication protein	K7PL20	Enterobacteria_phage	9.6e-159	99.3
WP_000166207.1\|918032_918179_-	DUF2740 family protein	Q687G5	Enterobacteria_phage	1.1e-19	100.0
WP_000536663.1\|918213_918495_-	hypothetical protein	K7PMG0	Enterobacteria_phage	7.4e-44	98.9
WP_000067728.1\|918611_918827_-	helix-turn-helix transcriptional regulator	A0A0N7C2U7	Escherichia_phage	8.2e-35	98.6
WP_104460248.1\|918902_919598_+	LexA family transcriptional regulator	A0A0N7BTS4	Escherichia_phage	3.7e-129	96.1
WP_072190279.1\|919878_920259_+	antitermination protein	A4KWR0	Enterobacteria_phage	3.1e-53	100.0
WP_029700898.1\|920270_920894_+	hypothetical protein	K7PKU5	Enterobacteria_phage	5.8e-105	95.7
WP_128357223.1\|920933_921185_+	hypothetical protein	A0A088CPT8	Enterobacteria_phage	4.4e-40	95.2
WP_029700895.1\|921188_921659_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	5.3e-87	98.7
WP_001198861.1\|921849_922014_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	1.1e-26	100.0
WP_000372936.1\|921982_922096_+	host cell division inhibitory peptide Kil	K7PL44	Enterobacteria_phage	7.8e-13	97.3
WP_000613347.1\|922092_922281_+	hypothetical protein	A0A2D1GM16	Escherichia_phage	1.7e-28	100.0
WP_000536247.1\|922289_922970_+	ATP-binding protein	A0A2D1GLT5	Escherichia_phage	4.5e-127	100.0
WP_001535902.1\|922966_923554_+	hypothetical protein	G9L666	Escherichia_phage	8.4e-106	99.5
WP_001111298.1\|923577_923871_+	DUF2856 family protein	K7P7E6	Enterobacteria_phage	1.9e-50	99.0
WP_029700889.1\|924409_925006_+	ead/Ea22-like family protein	H6WZG2	Escherichia_phage	9.5e-73	78.3
WP_029700887.1\|924998_925190_+	hypothetical protein	A0A0F6R8N3	Escherichia_coli_O157_typing_phage	3.6e-26	92.1
WP_029700885.1\|925328_926126_+	DUF550 domain-containing protein	K7PGV7	Enterobacterial_phage	8.3e-48	65.6
WP_001277766.1\|926222_926402_+	Eag protein	K7PL40	Enterobacteria_phage	2.8e-28	96.6
WP_029700883.1\|926502_926847_+	hypothetical protein	K7PJY7	Enterobacterial_phage	3.8e-58	97.4
WP_000132739.1\|926926_927118_+	AlpA family phage regulatory protein	A0A0P0ZBL0	Stx2-converting_phage	1.7e-31	100.0
WP_029700882.1\|927098_928277_-\|integrase	site-specific integrase	A0A0P0ZDN8	Stx2-converting_phage	2.4e-229	98.5
WP_001576845.1\|928458_929883_+	exodeoxyribonuclease I	NA	NA	NA	NA
928393:928410	attR	NA	NA	NA	NA
WP_001531805.1\|929993_930452_-\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	1.2e-11	31.5

DBSCAN-SWA_7

953598 : 959901

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001100793.1\|953598_954141_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.0e-50	61.8
WP_000857525.1\|954145_955024_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.6e-107	64.5
WP_001023641.1\|955081_955981_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	1.7e-28	34.8
WP_000699407.1\|955980_957066_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	8.8e-101	53.9
WP_000183040.1\|957438_958332_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	3.0e-46	42.0
WP_001116066.1\|958506_959901_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	6.3e-19	33.0

DBSCAN-SWA_8

1066293 : 1075738

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001292786.1\|1066293_1067430_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	6.1e-161	96.7
WP_001296230.1\|1067426_1069430_+	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
WP_001296231.1\|1069554_1070016_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
WP_001295430.1\|1070056_1070527_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_000598641.1\|1070573_1071293_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|1071289_1072975_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240408.1\|1073196_1073928_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	6.3e-111	98.5
WP_001216963.1\|1073987_1074095_+	protein YohO	NA	NA	NA	NA
WP_000783109.1\|1074075_1074807_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569347.1\|1074811_1075738_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.3e-23	30.8

DBSCAN-SWA_9

1429887 : 1496375

Escherichia_phage(50.88%)

terminase,protease,tRNA,integrase,holin,tail

attL 1453217:1453233|attR 1493261:1493277

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000829367.1\|1429887_1431903_-\|tRNA	tRNA cytosine(34) acetyltransferase TmcA	NA	NA	NA	NA
WP_001267498.1\|1431917_1432781_-	neutral zinc metallopeptidase	NA	NA	NA	NA
WP_001295467.1\|1432948_1433662_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3FGF0	Synechococcus_phage	6.9e-38	36.1
WP_001296286.1\|1433874_1434909_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_001295469.1\|1434925_1435804_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_000176187.1\|1435949_1436522_+	glycine cleavage system transcriptional repressor	NA	NA	NA	NA
WP_001068682.1\|1436521_1436992_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
WP_000892043.1\|1437089_1438151_-	AI-2E family transporter	NA	NA	NA	NA
WP_000489665.1\|1438363_1439827_+\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
WP_000166449.1\|1439847_1440207_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
WP_000247065.1\|1440344_1441091_-	DnaA inactivator Hda	NA	NA	NA	NA
WP_000198327.1\|1441140_1442430_-	uracil permease	Q9KX94	Enterobacteria_phage	8.6e-63	37.1
WP_001295473.1\|1442515_1443142_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_001296287.1\|1443466_1444504_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	1.8e-71	43.3
WP_001028626.1\|1444503_1445142_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	2.4e-29	42.9
WP_001296288.1\|1445313_1447380_+	polyphosphate kinase 1	NA	NA	NA	NA
WP_001121363.1\|1447384_1448926_+	exopolyphosphatase	NA	NA	NA	NA
WP_000772711.1\|1448964_1451208_-	cyclic-guanylate-specific phosphodiesterase PdeF	NA	NA	NA	NA
WP_000017548.1\|1451389_1451542_-	hypothetical protein	G9L6F3	Escherichia_phage	7.1e-17	90.0
WP_000076001.1\|1451559_1451751_+	DUF2633 family protein	G9L6F2	Escherichia_phage	7.3e-27	100.0
WP_001311989.1\|1452052_1452571_+	glycine zipper 2TM domain-containing protein	G9L6F1	Escherichia_phage	2.9e-62	99.4
WP_000755178.1\|1452586_1453126_+	DUF5384 family protein	G9L6F0	Escherichia_phage	1.4e-43	98.9
1453217:1453233	attL	NA	NA	NA	NA
WP_059331897.1\|1453320_1453818_-	DUF2514 family protein	A0A193GYU6	Enterobacter_phage	1.1e-53	67.7
WP_061092055.1\|1453814_1454444_-	glycoside hydrolase family 19 protein	G9L6E8	Escherichia_phage	8.4e-112	96.2
WP_021537560.1\|1454433_1454742_-\|holin	phage holin family protein	G9L6E7	Escherichia_phage	7.3e-45	91.2
WP_021537561.1\|1454731_1455133_-	hypothetical protein	A0A193GYV1	Enterobacter_phage	5.4e-56	85.0
WP_061092056.1\|1455230_1457882_-\|tail	tail fiber domain-containing protein	G9L6E4	Escherichia_phage	8.5e-65	78.3
WP_001188252.1\|1458077_1458335_+	hypothetical protein	G9L6E3	Escherichia_phage	1.3e-42	100.0
WP_000126406.1\|1458647_1459334_+	hypothetical protein	G9L6E2	Escherichia_phage	3.5e-103	81.8
WP_000947646.1\|1459543_1460083_+	DUF4760 domain-containing protein	NA	NA	NA	NA
WP_000708858.1\|1460178_1460340_+	hypothetical protein	G9L6D9	Escherichia_phage	2.5e-20	100.0
WP_078175524.1\|1460378_1460792_-	hypothetical protein	NA	NA	NA	NA
WP_078175526.1\|1460801_1463276_-	hypothetical protein	A0A0F6TK45	Escherichia_coli_O157_typing_phage	0.0e+00	96.6
WP_078175528.1\|1463281_1465084_-	hypothetical protein	A0A0F6TJQ3	Escherichia_coli_O157_typing_phage	0.0e+00	98.2
WP_078175530.1\|1465080_1467594_-	hypothetical protein	A0A0F6R8M6	Escherichia_coli_O157_typing_phage	0.0e+00	98.4
WP_000332878.1\|1467593_1468139_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	9.8e-93	100.0
WP_021556178.1\|1468138_1468603_-	hypothetical protein	G9L6D1	Escherichia_phage	4.2e-84	98.7
WP_078175532.1\|1468602_1471074_-	hypothetical protein	G9L6D0	Escherichia_phage	0.0e+00	98.9
WP_000179255.1\|1471073_1471679_-	hypothetical protein	G9L6C9	Escherichia_phage	1.2e-110	98.5
WP_021556180.1\|1471678_1472002_-	hypothetical protein	G9L6C8	Escherichia_phage	1.8e-49	91.6
WP_021524923.1\|1472052_1472388_-	hypothetical protein	A0A193GYI9	Enterobacter_phage	3.7e-26	92.8
WP_078175534.1\|1472398_1472836_-	hypothetical protein	A0A0F6R7N9	Escherichia_coli_O157_typing_phage	1.2e-69	93.8
WP_021556181.1\|1472887_1473874_-	hypothetical protein	G9L6C5	Escherichia_phage	9.5e-187	99.4
WP_021556182.1\|1473888_1474584_-	hypothetical protein	G9L6C4	Escherichia_phage	1.8e-94	99.1
WP_000133160.1\|1474586_1474883_-	hypothetical protein	G9L6C3	Escherichia_phage	1.3e-46	100.0
WP_000852427.1\|1474879_1476559_-\|tail	tail protein	G9L6C2	Escherichia_phage	1.8e-302	99.3
WP_000335899.1\|1476573_1476780_-	hypothetical protein	G9L6C1	Escherichia_phage	6.0e-11	100.0
WP_021556183.1\|1477482_1477854_+	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	9.1e-58	91.1
WP_078175536.1\|1477944_1479420_-\|terminase	terminase	A0A0F6TK57	Escherichia_coli_O157_typing_phage	1.4e-295	99.2
WP_024166494.1\|1479416_1480127_-\|terminase	terminase small subunit	Q287B7	Escherichia_phage	1.0e-105	85.2
WP_077873726.1\|1480123_1480336_-	hypothetical protein	Q7Y4V0	Enterobacteria_phage	2.3e-13	50.7
WP_001129693.1\|1480353_1480692_-	hypothetical protein	A0A0F6TJR3	Escherichia_coli_O157_typing_phage	8.3e-58	99.1
WP_000492058.1\|1480727_1480970_-	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	5.8e-29	78.8
WP_078175538.1\|1481036_1481570_-	DUF551 domain-containing protein	K7P7E4	Enterobacteria_phage	5.4e-35	53.5
WP_153302176.1\|1481571_1481979_-	hypothetical protein	A0A1U9AJ59	Stx1_converting_phage	4.1e-43	73.1
WP_078175540.1\|1482492_1482936_-	ead/Ea22-like family protein	A0A222YWN7	Escherichia_phage	6.6e-39	100.0
WP_078175542.1\|1482932_1483370_-	hypothetical protein	A0A2I6TCH0	Escherichia_phage	8.0e-29	63.7
WP_021517659.1\|1484036_1484390_-	hypothetical protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	5.7e-41	75.0
WP_001066741.1\|1484507_1485293_-	hypothetical protein	A0A0F6TJ71	Escherichia_coli_O157_typing_phage	3.6e-152	99.6
WP_000086398.1\|1485289_1486105_-	helix-turn-helix domain-containing protein	Q286X4	Escherichia_phage	1.1e-116	94.9
WP_000402893.1\|1486120_1486321_-	hypothetical protein	A0A0F6TJB7	Escherichia_coli_O157_typing_phage	6.0e-32	98.5
WP_001282459.1\|1486471_1486702_-	hypothetical protein	G9L6A7	Escherichia_phage	2.6e-39	100.0
WP_000836290.1\|1486856_1487441_+	helix-turn-helix transcriptional regulator	A0A0F6R8L7	Escherichia_coli_O157_typing_phage	7.0e-105	100.0
WP_001198620.1\|1487594_1487747_+	hypothetical protein	G9L6A5	Escherichia_phage	5.4e-25	100.0
WP_001102254.1\|1487749_1488049_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	1.4e-45	98.0
WP_000802268.1\|1488045_1488867_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A2R9YJH7	Escherichia_phage	1.2e-163	100.0
WP_000063834.1\|1488863_1489805_+	recombinase RecT	A0A2R9YJJ1	Escherichia_phage	4.5e-178	100.0
WP_000675390.1\|1489854_1490103_+	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	3.6e-42	100.0
WP_001335975.1\|1490260_1490512_+	PerC family transcriptional regulator	G9L6A0	Escherichia_phage	3.1e-41	100.0
WP_000163459.1\|1490504_1491155_+	adenine methylase	G9L699	Escherichia_phage	2.5e-127	99.1
WP_001055436.1\|1491151_1491811_+	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	3.3e-103	79.5
WP_021517660.1\|1491813_1493070_-\|integrase	site-specific integrase	A0A0F6TJM5	Escherichia_coli_O157_typing_phage	5.7e-237	99.3
WP_000138282.1\|1493262_1494840_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
1493261:1493277	attR	NA	NA	NA	NA
WP_001296289.1\|1494908_1496375_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	8.8e-88	38.9

DBSCAN-SWA_10

1580117 : 1667895

Enterobacteria_phage(33.93%)

terminase,portal,protease,tRNA,lysis,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000083664.1\|1580117_1580855_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000219193.1\|1580986_1582321_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
WP_001296304.1\|1582353_1583235_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000189207.1\|1583337_1583925_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627804.1\|1583980_1584364_-	autonomous glycyl radical cofactor GrcA	A0A088FS37	Shigella_phage	4.7e-33	70.9
WP_001262723.1\|1584668_1585358_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	2.1e-55	52.1
WP_000997384.1\|1585405_1586443_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001098726.1\|1586649_1587069_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
WP_001296305.1\|1587137_1587836_+	DTW domain-containing protein	NA	NA	NA	NA
WP_000082935.1\|1587867_1590528_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_001312028.1\|1590641_1591997_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_001467872.1\|1592042_1592366_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_000852119.1\|1592362_1593661_-	alpha-ketoglutarate permease	Q6JIH2	Burkholderia_virus	2.4e-44	31.5
WP_001235102.1\|1599447_1602021_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
WP_000040156.1\|1602150_1602882_-	polyphenol oxidase	NA	NA	NA	NA
WP_000079111.1\|1602878_1603859_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000197686.1\|1603993_1604731_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000178456.1\|1605000_1605342_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_001386991.1\|1605445_1605493_+	hypothetical protein	NA	NA	NA	NA
WP_000200140.1\|1605591_1606752_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_000225212.1\|1606794_1607916_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_001168045.1\|1607926_1608997_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.0e-90	51.2
WP_001296308.1\|1609206_1609572_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_001212400.1\|1609718_1610237_+	YfiR family protein	NA	NA	NA	NA
WP_000969008.1\|1610226_1611453_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_000589791.1\|1611468_1611951_+	OmpA family protein	NA	NA	NA	NA
WP_000065253.1\|1612027_1612375_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000264790.1\|1612416_1613184_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043335.1\|1613214_1613763_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000256450.1\|1613781_1614030_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460035.1\|1614166_1615528_-	signal recognition particle protein	NA	NA	NA	NA
WP_001314062.1\|1615694_1616486_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_010723175.1\|1616506_1617793_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001296310.1\|1617846_1618440_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059176.1\|1618562_1619441_+	NAD(+) kinase	NA	NA	NA	NA
WP_000880939.1\|1619526_1621188_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203437.1\|1621336_1621678_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001117834.1\|1621739_1622030_-	RnfH family protein	NA	NA	NA	NA
WP_000600193.1\|1622019_1622496_-	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA
WP_000162574.1\|1622627_1623110_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
WP_012602456.1\|1623915_1625130_+	type II restriction endonuclease	E5E3X4	Burkholderia_phage	7.9e-34	38.6
WP_072095179.1\|1625164_1626568_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	4.0e-106	50.1
WP_000355482.1\|1627004_1627778_+	hypothetical protein	G9IA57	Pseudomonas_phage	4.1e-36	37.7
WP_029701022.1\|1627847_1628432_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.6e-103	95.8
WP_072059871.1\|1628431_1631503_-\|tail	prophage tail fiber N-terminal domain-containing protein	U5N099	Enterobacteria_phage	2.8e-67	80.7
WP_029700816.1\|1631567_1632167_-	Ail/Lom family outer membrane beta-barrel protein	A5LH44	Enterobacteria_phage	4.5e-107	95.5
WP_029700815.1\|1632237_1635735_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	97.5
WP_050550752.1\|1635795_1636404_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	8.1e-104	97.0
WP_064735486.1\|1636340_1637084_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.3e-147	95.1
WP_001152385.1\|1637088_1637787_-\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	6.0e-135	100.0
WP_000447247.1\|1637796_1638126_-\|tail	phage tail protein	A0A291AWW9	Escherichia_phage	1.7e-60	99.1
WP_029700810.1\|1638125_1641191_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	99.2
WP_001161009.1\|1641162_1641492_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_001440689.1\|1641500_1641887_-\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	6.1e-65	99.2
WP_000211099.1\|1641947_1642691_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	3.0e-132	99.6
WP_001079398.1\|1642702_1643104_-\|tail	tail protein	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
WP_029700808.1\|1643100_1643679_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.6e-101	98.4
WP_001283144.1\|1643690_1643966_-	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	8.6e-45	98.9
WP_001097050.1\|1643958_1644282_-	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
WP_001136591.1\|1644368_1646396_-\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	0.0e+00	99.8
WP_029700806.1\|1646340_1647849_-\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	6.6e-288	99.6
WP_001072975.1\|1647848_1648061_-	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_000934127.1\|1648057_1650160_-\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	97.4
WP_000373425.1\|1650159_1650654_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
WP_001139681.1\|1651329_1651482_-	hypothetical protein	K7PKL2	Enterobacteria_phage	4.7e-21	96.0
WP_029700804.1\|1651469_1651937_-\|lysis	lysis protein	K7PH77	Enterobacteria_phage	6.1e-75	97.4
WP_001135250.1\|1651933_1652431_-	lysozyme RrrD	A0A291AWW2	Escherichia_phage	4.5e-92	100.0
WP_000839596.1\|1652430_1652646_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_029700801.1\|1652713_1653766_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	1.4e-207	99.7
WP_029700800.1\|1653916_1654120_-	hypothetical protein	A0A291AWX6	Escherichia_phage	3.0e-31	98.5
WP_000868396.1\|1654384_1655311_+	hypothetical protein	NA	NA	NA	NA
WP_001531322.1\|1655297_1655846_+	hypothetical protein	NA	NA	NA	NA
WP_029700797.1\|1655858_1656200_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	1.6e-56	89.4
WP_001360050.1\|1656217_1657207_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.5e-195	100.0
WP_029700795.1\|1657214_1658012_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	2.6e-150	99.6
WP_000767113.1\|1658031_1658421_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	7.1e-69	100.0
WP_000210155.1\|1658417_1658744_-	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	7.8e-53	98.1
WP_001355692.1\|1658740_1659394_-	phage N-6-adenine-methyltransferase	A0A0P0ZCC0	Stx2-converting_phage	1.1e-127	100.0
WP_021576994.1\|1659393_1659888_-	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	2.5e-87	99.4
WP_000104967.1\|1659884_1660826_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.3e-153	100.0
WP_001250269.1\|1660815_1660995_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_000205494.1\|1661760_1661961_-	cell division protein	NA	NA	NA	NA
WP_000450737.1\|1662058_1662685_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	1.9e-47	48.8
WP_000549623.1\|1662932_1663139_+	hypothetical protein	NA	NA	NA	NA
WP_000016389.1\|1663110_1663545_-	hypothetical protein	U5P096	Shigella_phage	8.4e-79	100.0
WP_000135682.1\|1664013_1664376_+	hypothetical protein	U5P4J6	Shigella_phage	3.3e-60	100.0
WP_029700792.1\|1664441_1665266_+	DUF2303 family protein	K7PJQ6	Enterobacteria_phage	1.0e-149	99.3
WP_000008249.1\|1665394_1665931_+	5'-deoxynucleotidase	U5P0T3	Shigella_phage	4.8e-100	98.9
WP_001222408.1\|1665921_1666284_+	phage protein	K7PH61	Enterobacteria_phage	2.0e-65	96.7
WP_001331173.1\|1666280_1666496_+	hypothetical protein	K7PLX1	Enterobacteria_phage	1.2e-14	65.1
WP_001331174.1\|1666555_1666762_+	hypothetical protein	I6PBM8	Cronobacter_phage	6.9e-23	70.3
WP_029700790.1\|1666722_1667895_+	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	5.1e-147	67.5

DBSCAN-SWA_11

1737387 : 1744527

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000103863.1\|1737387_1739949_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8
WP_001141293.1\|1740054_1740711_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	3.3e-50	46.1
WP_001296319.1\|1740761_1741529_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	9.7e-70	57.4
WP_000847996.1\|1741724_1742633_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.9e-117	76.2
WP_000590411.1\|1742629_1743892_+	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
WP_001279004.1\|1743888_1744527_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	74.5

DBSCAN-SWA_12

1991210 : 2053300

Staphylococcus_phage(50.0%)

protease,tRNA,transposase,integrase,lysis

attL 1992419:1992436|attR 2052697:2052714

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001296354.1\|1991210_1991969_+\|protease	metalloprotease LoiP	NA	NA	NA	NA
WP_000105562.1\|1992398_1993319_-	agmatinase	NA	NA	NA	NA
1992419:1992436	attL	NA	NA	NA	NA
WP_000758881.1\|1993454_1994186_-	hypothetical protein	NA	NA	NA	NA
WP_001295380.1\|1994331_1996308_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA
WP_001297406.1\|1996316_1996448_-	acid stress response protein YqgB	NA	NA	NA	NA
WP_001331575.1\|1996583_1996799_+	hypothetical protein	NA	NA	NA	NA
WP_001062128.1\|1997102_1998257_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.0e-128	63.2
WP_001112301.1\|1998692_2000087_+	galactose/proton symporter	NA	NA	NA	NA
WP_001296359.1\|2000163_2000661_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_000286500.1\|2000755_2001463_+	deoxyribonuclease I	NA	NA	NA	NA
WP_001222509.1\|2001542_2002274_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_000593274.1\|2002286_2003237_+	glutathione synthase	NA	NA	NA	NA
WP_001053178.1\|2003345_2003909_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017111.1\|2003908_2004325_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_001296360.1\|2004439_2005420_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997795.1\|2005437_2006142_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094831.1\|2006159_2006726_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_001277229.1\|2006722_2007013_+	YggU family protein	NA	NA	NA	NA
WP_001174754.1\|2007020_2007614_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_000239963.1\|2007606_2008743_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_000783999.1\|2009057_2010044_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_000577034.1\|2010088_2010592_+	TRAP transporter small permease	NA	NA	NA	NA
WP_000378955.1\|2010591_2011893_+	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_000745240.1\|2011948_2012956_-	DUF1202 family protein	NA	NA	NA	NA
WP_000394132.1\|2013072_2014119_-	L-asparaginase 2	NA	NA	NA	NA
WP_000984796.1\|2014294_2015014_-	DUF2884 domain-containing protein	NA	NA	NA	NA
WP_001296361.1\|2015034_2015175_-	hypothetical protein	NA	NA	NA	NA
WP_001107566.1\|2015197_2015524_-	YggL family protein	NA	NA	NA	NA
WP_000786911.1\|2015523_2016243_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001296362.1\|2016403_2017456_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091700.1\|2017483_2017759_+	oxidative damage protection protein	NA	NA	NA	NA
WP_000760323.1\|2017823_2018903_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001296363.1\|2019104_2020361_+	nucleoside permease NupG	NA	NA	NA	NA
WP_000839781.1\|2020409_2022545_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234526.1\|2022937_2023645_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218869.1\|2024023_2025289_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.1e-77	38.1
WP_000147017.1\|2025544_2026588_+	hypothetical protein	NA	NA	NA	NA
WP_001774069.1\|2028281_2028833_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_001296368.1\|2031336_2031558_+	pap operon regulatory protein PapI	NA	NA	NA	NA
WP_001513409.1\|2033425_2033539_-\|lysis	lysis protein	NA	NA	NA	NA
WP_001110186.1\|2035372_2035633_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_000109147.1\|2035674_2036235_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001296373.1\|2036274_2036703_+	DUF417 family protein	NA	NA	NA	NA
WP_000074472.1\|2037420_2038614_-	MFS transporter	NA	NA	NA	NA
WP_001296374.1\|2038749_2040474_+	aerobactin synthase IucA	NA	NA	NA	NA
WP_001287500.1\|2040474_2041422_+	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_001015715.1\|2041421_2043164_+	aerobactin synthase IucC	NA	NA	NA	NA
WP_000750130.1\|2043160_2044438_+	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_000973516.1\|2044519_2046721_+	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_011076574.1\|2047271_2047415_-	hypothetical protein	NA	NA	NA	NA
WP_001034083.1\|2047664_2051552_+\|protease	serine protease autotransporter toxin Sat	Q9LA58	Enterobacterial_phage	1.2e-227	39.0
WP_001254932.1\|2052148_2053300_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
2052697:2052714	attR	NA	NA	NA	NA

DBSCAN-SWA_13

2073584 : 2079598

Stx2-converting_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000435655.1\|2073584_2074010_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	3.6e-34	74.2
WP_000624646.1\|2074006_2074357_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	5.4e-36	62.1
WP_000997995.1\|2075484_2077023_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.2e-281	93.9
WP_000080195.1\|2077181_2078795_-\|transposase	IS66-like element ISEc23 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
WP_000624722.1\|2078825_2079176_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_000422741.1\|2079172_2079598_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0

DBSCAN-SWA_14

4206677 : 4273930

Stx2-converting_phage(21.43%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072276355.1\|4206677_4207646_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	5.7e-59	47.7
WP_000033841.1\|4209379_4210213_+	myo-inositol utilization transcriptional regulator IolR	NA	NA	NA	NA
WP_000495231.1\|4211784_4213218_-	myo-inositol import MFS transporter IolT1	NA	NA	NA	NA
WP_000765189.1\|4213457_4213652_-	hypothetical protein	NA	NA	NA	NA
WP_000083107.1\|4213688_4215125_+	myo-inositol import MFS transporter IolT2	NA	NA	NA	NA
WP_000502122.1\|4215536_4215968_-\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	1.9e-14	32.3
WP_000002010.1\|4216163_4216973_-	5-deoxy-glucuronate isomerase	NA	NA	NA	NA
WP_000450724.1\|4216997_4218503_-	malonate-semialdehyde dehydrogenase IolA	NA	NA	NA	NA
WP_078175574.1\|4218518_4218821_-	hypothetical protein	NA	NA	NA	NA
WP_024185443.1\|4218937_4219762_+	myo-inositol utilization transcriptional regulator ReiD	NA	NA	NA	NA
WP_012601329.1\|4220638_4221559_+	myo-inosose-2 dehydratase	NA	NA	NA	NA
WP_000172703.1\|4221577_4222588_+	inositol 2-dehydrogenase IolG1	NA	NA	NA	NA
WP_000678390.1\|4222685_4224029_+	lysosomal glucosyl ceramidase-like type III secretion effector SrfJ	NA	NA	NA	NA
WP_000976926.1\|4224029_4224863_+	2-keto-myo-inositol isomerase IolI1	NA	NA	NA	NA
WP_001111173.1\|4224859_4226026_-	MFS transporter	NA	NA	NA	NA
WP_000124074.1\|4227419_4227767_-	hypothetical protein	NA	NA	NA	NA
WP_012601331.1\|4227902_4229840_-	5-dehydro-2-deoxygluconokinase	NA	NA	NA	NA
WP_000849474.1\|4230253_4232194_+	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	NA	NA	NA	NA
WP_000736098.1\|4232374_4233397_+	D-chiro-inositol-2-dehydrogenase IolG2	NA	NA	NA	NA
WP_061091458.1\|4233469_4234696_+	MFS transporter	NA	NA	NA	NA
WP_001282151.1\|4234977_4235367_+	IS66 family insertion sequence hypothetical protein	B6DZU5	Stx2-converting_phage	7.8e-68	99.2
WP_000612553.1\|4235363_4235711_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.1e-60	98.3
WP_078175576.1\|4235760_4237299_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	8.5e-283	94.3
WP_000175354.1\|4237491_4238118_-	hypothetical protein	NA	NA	NA	NA
WP_024224224.1\|4238114_4239008_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	1.2e-31	38.4
WP_061091446.1\|4239602_4241369_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	A0A0R6PI85	Moraxella_phage	7.8e-22	25.3
WP_024209848.1\|4248299_4248710_+	hypothetical protein	NA	NA	NA	NA
WP_000165753.1\|4249318_4249636_-	hypothetical protein	NA	NA	NA	NA
WP_001298859.1\|4249952_4251494_+\|transposase	IS21-like element ISEc12 family transposase	K4I413	Acidithiobacillus_phage	1.7e-129	46.4
WP_001016257.1\|4251508_4252255_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
WP_061091425.1\|4252373_4255487_-	HsdR family type I site-specific deoxyribonuclease	NA	NA	NA	NA
WP_061091424.1\|4255488_4256733_-	AAA family ATPase	NA	NA	NA	NA
WP_078175578.1\|4256734_4257910_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_061091422.1\|4257906_4259463_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	7.6e-106	43.1
WP_142436564.1\|4259726_4260599_+	GTPase family protein	NA	NA	NA	NA
WP_033811099.1\|4260816_4263201_+	dynamin family protein	NA	NA	NA	NA
WP_000203554.1\|4263197_4264103_+	hypothetical protein	NA	NA	NA	NA
WP_033811097.1\|4264099_4265170_+	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_033811096.1\|4265302_4265845_+	hypothetical protein	NA	NA	NA	NA
WP_077777324.1\|4266205_4266688_+	hypothetical protein	NA	NA	NA	NA
WP_061091467.1\|4267055_4267877_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	5.2e-45	37.8
WP_000680586.1\|4267876_4268122_+	hypothetical protein	NA	NA	NA	NA
WP_000855069.1\|4268215_4268689_+	antirestriction protein	A9J566	Pseudomonas_phage	1.9e-12	31.2
WP_001186774.1\|4268704_4269181_+	RadC family protein	NA	NA	NA	NA
WP_000692307.1\|4269249_4269471_+	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	8.5e-11	45.8
WP_032215284.1\|4269633_4270011_+	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_061091468.1\|4270057_4270435_+	toxin	NA	NA	NA	NA
WP_000520337.1\|4270833_4271751_-\|transposase	IS5-like element ISEc35 family transposase	A0A1V0E8E1	Vibrio_phage	2.2e-100	59.2
WP_061091469.1\|4271999_4272197_+	DUF957 domain-containing protein	NA	NA	NA	NA
WP_050876300.1\|4272293_4272857_+	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_001179707.1\|4272925_4273930_+\|transposase	IS110-like element ISSfl8 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

4880523 : 4990315

131

Enterobacteria_phage(41.67%)

terminase,portal,protease,tRNA,transposase,integrase,holin,capsid,plate,tail,head

attL 4975913:4975928|attR 4995234:4995249

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000520781.1\|4880523_4880844_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
WP_000934041.1\|4880874_4883151_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
WP_001040187.1\|4883835_4884054_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_001241674.1\|4884338_4885043_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001202204.1\|4885084_4886806_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	1.4e-20	25.0
WP_001043561.1\|4886806_4888573_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	4.1e-23	24.3
WP_001385255.1\|4888695_4889661_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.9e-62	44.6
WP_000228473.1\|4890204_4890699_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_000077041.1\|4890833_4894940_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
WP_001295343.1\|4895098_4895710_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_000067797.1\|4895720_4897064_+	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	2.1e-80	40.8
WP_000886683.1\|4897154_4898447_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
WP_000078916.1\|4898752_4898893_-	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	1.5e-18	97.8
WP_000488106.1\|4899084_4899345_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_000132830.1\|4899385_4900495_-	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	1.3e-195	94.9
WP_000005447.1\|4900652_4901837_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	8.4e-222	97.5
WP_000290462.1\|4901836_4902349_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	1.5e-90	97.1
WP_000651577.1\|4902404_4902779_+\|tail	tail protein	A0A0A7NPZ0	Enterobacteria_phage	9.9e-36	71.5
WP_000333503.1\|4902787_4902943_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	9.7e-22	96.1
WP_000853410.1\|4902929_4905737_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	90.1
WP_000979945.1\|4905749_4906238_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.4e-85	99.4
WP_000905061.1\|4906266_4906866_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	3.8e-98	98.9
WP_023363133.1\|4907093_4907879_+	hypothetical protein	Q858V4	Yersinia_virus	1.1e-108	76.6
WP_001554335.1\|4907880_4908408_+\|tail	tail fiber assembly protein	A0A0C4UR05	Shigella_phage	2.6e-90	93.7
WP_000972134.1\|4908436_4908970_-\|tail	tail fiber assembly protein	C9DGR0	Escherichia_phage	4.2e-96	98.9
WP_021538277.1\|4908972_4910958_-\|tail	tail fiber protein	A0A0A7NV63	Enterobacteria_phage	3.2e-173	86.0
WP_000071703.1\|4910960_4911491_-\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	3.6e-92	98.2
WP_001111954.1\|4911483_4912380_-\|plate	baseplate J/gp47 family protein	A0A0A7NPY5	Enterobacteria_phage	3.3e-154	97.7
WP_001067543.1\|4912383_4912713_-	GPW/gp25 family protein	A0A0A7NQ90	Enterobacteria_phage	8.4e-55	99.1
WP_001295912.1\|4912730_4913297_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	6.6e-100	98.4
WP_000356366.1\|4913308_4913944_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	4.1e-114	99.5
WP_000921127.1\|4913936_4914404_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	3.5e-83	95.5
WP_000202148.1\|4914427_4916305_-	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	2.7e-299	80.2
WP_000780577.1\|4916443_4916839_-	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	1.0e-59	93.3
WP_000072341.1\|4916835_4917228_-	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	1.9e-69	96.9
WP_001342221.1\|4917224_4917548_-\|holin	phage holin family protein	A0A0A7NRY9	Enterobacteria_phage	1.7e-47	93.5
WP_000864901.1\|4917550_4917751_-\|tail	tail protein X	A0A0A7NV57	Enterobacteria_phage	3.5e-32	100.0
WP_000063100.1\|4917750_4918245_-\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	1.9e-87	97.0
WP_000632309.1\|4918346_4919147_-\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	6.9e-127	89.1
WP_001055083.1\|4919192_4920245_-\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	1.4e-188	94.3
WP_001262655.1\|4920268_4921105_-\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	2.7e-150	99.6
WP_000613780.1\|4921259_4923011_+	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.8
WP_000087814.1\|4923010_4924057_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	2.2e-202	99.7
WP_000236495.1\|4924071_4924596_-	hypothetical protein	NA	NA	NA	NA
WP_001068329.1\|4925319_4925817_+	DUF4760 domain-containing protein	NA	NA	NA	NA
WP_000193205.1\|4925856_4926699_+	hypothetical protein	NA	NA	NA	NA
WP_000211282.1\|4926782_4927097_-	plasmid partitioning/stability family protein	A0A0A7NPT5	Enterobacteria_phage	4.1e-19	52.3
WP_000686485.1\|4927101_4928061_-	plasmid segregation protein ParM	A0A0A7NPX4	Enterobacteria_phage	4.2e-179	99.1
WP_000123489.1\|4928137_4930960_-	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	98.4
WP_000599382.1\|4930966_4931332_-	hypothetical protein	A0A0A7NRY1	Enterobacteria_phage	1.7e-61	97.5
WP_023142408.1\|4931328_4931946_-	ash family protein	S5MQL6	Escherichia_phage	1.5e-09	42.0
WP_000104290.1\|4931957_4932257_-	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	2.4e-40	88.9
WP_000153700.1\|4932253_4932520_-	winged helix-turn-helix transcriptional regulator	A0A0A7NV47	Enterobacteria_phage	2.0e-30	75.9
WP_000985157.1\|4932516_4932720_-	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	2.5e-25	83.6
WP_000543036.1\|4932743_4933154_-	hypothetical protein	NA	NA	NA	NA
WP_000021715.1\|4933247_4933361_-	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	1.8e-09	89.2
WP_000514277.1\|4933357_4933600_-	DUF4754 family protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
WP_000159455.1\|4933611_4933890_-	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	3.1e-34	79.3
WP_000776267.1\|4933900_4934251_-	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	8.1e-56	93.1
WP_001287828.1\|4934388_4934580_+	hypothetical protein	NA	NA	NA	NA
WP_000856387.1\|4934586_4935009_-	hypothetical protein	NA	NA	NA	NA
WP_001204236.1\|4935013_4935535_-	transcriptional regulator	NA	NA	NA	NA
WP_001368591.1\|4935639_4935981_+	helix-turn-helix transcriptional regulator	Q1JS45	Enterobacteria_phage	4.7e-16	51.2
WP_000023739.1\|4936050_4937043_+\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	1.3e-103	56.2
WP_000850306.1\|4937342_4939787_+	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	6.6e-221	49.8
WP_000213098.1\|4939797_4940415_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.0e-77	60.6
WP_000534666.1\|4940416_4941280_+	dimethyl sulfoxide reductase anchor subunit DmsC	NA	NA	NA	NA
WP_000165876.1\|4941315_4941942_-	hydrolase	NA	NA	NA	NA
WP_000109283.1\|4942255_4943404_+	MFS transporter	NA	NA	NA	NA
WP_000111043.1\|4943500_4944241_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	8.0e-21	26.5
WP_001292822.1\|4944432_4946715_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-162	41.5
WP_001295917.1\|4946769_4947627_-	formate transporter FocA	NA	NA	NA	NA
WP_000194832.1\|4948032_4949793_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_000642852.1\|4949922_4950615_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_000057158.1\|4950813_4951902_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	2.7e-81	46.8
WP_000445240.1\|4951972_4953256_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_000904922.1\|4953511_4954084_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.6e-85	85.2
WP_064767240.1\|4954143_4954584_+\|tail	tail fiber protein	K7PH60	Enterobacterial_phage	7.1e-41	55.6
WP_023142129.1\|4954594_4955056_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	3.9e-34	50.0
WP_000072165.1\|4955062_4955677_-\|tail	tail fiber assembly protein	Q9MCR5	Enterobacteria_phage	2.5e-60	60.5
WP_000527461.1\|4955676_4957008_-\|tail	tail fiber protein	A0A0K2FIZ6	Escherichia_phage	4.8e-40	44.4
WP_000138756.1\|4957010_4957589_-\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	1.7e-66	66.8
WP_001219098.1\|4957581_4958685_-\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	1.4e-106	55.2
WP_000859111.1\|4958675_4959023_-	GPW/gp25 family protein	Q6QIA0	Burkholderia_phage	5.9e-35	62.4
WP_000148266.1\|4959077_4959674_-\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	3.2e-36	45.2
WP_000808007.1\|4959670_4960825_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	1.9e-85	47.6
WP_000478224.1\|4960812_4961025_-\|tail	tail protein X	Q6QIA3	Burkholderia_phage	1.2e-17	57.1
WP_000458387.1\|4961024_4961909_-\|tail	phage tail protein	A4JWL1	Burkholderia_virus	6.8e-51	47.9
WP_000016538.1\|4961908_4964860_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	9.8e-86	29.9
WP_001202894.1\|4964935_4965094_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_000084213.1\|4965017_4965353_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000110114.1\|4965450_4965732_-	hypothetical protein	NA	NA	NA	NA
WP_162832341.1\|4965734_4966259_-\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.1e-67	66.7
WP_000729834.1\|4966255_4967683_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A4JWK5	Burkholderia_virus	4.5e-214	76.3
WP_000666499.1\|4967672_4967924_-	hypothetical protein	NA	NA	NA	NA
WP_001101804.1\|4967923_4968388_-	hypothetical protein	Q6QIB2	Burkholderia_phage	9.1e-39	51.7
WP_000271668.1\|4968387_4968834_-	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	2.2e-34	52.3
WP_000537457.1\|4968835_4969174_-	DUF2190 family protein	NA	NA	NA	NA
WP_001286908.1\|4969183_4970137_-	hypothetical protein	A4JWK0	Burkholderia_virus	3.4e-64	43.8
WP_001273074.1\|4970151_4971267_-	hypothetical protein	A4JWJ9	Burkholderia_virus	9.4e-98	51.6
WP_000135514.1\|4971481_4971940_-	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	2.6e-30	44.8
WP_000117548.1\|4971942_4972764_-\|capsid	minor capsid protein	A4JWJ6	Burkholderia_virus	1.8e-98	61.9
WP_078175595.1\|4972744_4974241_-	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	2.8e-166	58.8
WP_169542415.1\|4974240_4975782_-	hypothetical protein	A4JWJ4	Burkholderia_virus	6.3e-185	62.8
WP_000124060.1\|4975832_4976378_-	DUF3486 family protein	A4JWJ3	Burkholderia_virus	9.3e-59	67.6
4975913:4975928	attL	NA	NA	NA	NA
WP_000227701.1\|4976377_4976689_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	9.4e-32	62.6
WP_000175099.1\|4976688_4977015_-	hypothetical protein	Q6QIC4	Burkholderia_phage	1.1e-17	48.6
WP_000264665.1\|4977011_4977662_-	hypothetical protein	J9SVN7	Pseudomonas_phage	2.8e-09	32.9
WP_001104440.1\|4977645_4978386_-	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-62	51.4
WP_000793146.1\|4978388_4978739_-	membrane protein	A4JWP3	Burkholderia_virus	1.5e-22	53.0
WP_000194951.1\|4978869_4979598_+	hypothetical protein	NA	NA	NA	NA
WP_001295927.1\|4979573_4979975_-	hypothetical protein	NA	NA	NA	NA
WP_001069611.1\|4979976_4980192_+	hypothetical protein	NA	NA	NA	NA
WP_000783854.1\|4980382_4981147_+	DNA adenine methylase	A2I2Y7	Vibrio_virus	5.2e-100	64.4
WP_000031013.1\|4981263_4981620_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000123378.1\|4981713_4981902_+	DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	3.9e-17	71.0
WP_000047759.1\|4981954_4982263_+	helix-turn-helix domain-containing protein	Q5ZR02	Pseudomonas_phage	2.7e-23	55.9
WP_000533817.1\|4982273_4983194_+	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	1.6e-74	56.2
WP_001095645.1\|4983193_4983511_+	hypothetical protein	NA	NA	NA	NA
WP_000186588.1\|4983526_4985296_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A4JWN2	Burkholderia_virus	1.5e-227	69.4
WP_000960679.1\|4985306_4986473_+	AAA family ATPase	A4JWN1	Burkholderia_virus	2.2e-121	59.4
WP_000843446.1\|4986475_4986745_+	hypothetical protein	NA	NA	NA	NA
WP_001140136.1\|4986772_4987303_+	host-nuclease inhibitor Gam family protein	L7P7T1	Pseudomonas_phage	1.2e-58	66.7
WP_000632576.1\|4987591_4987864_+	hypothetical protein	NA	NA	NA	NA
WP_001295929.1\|4987873_4988170_+	hypothetical protein	NA	NA	NA	NA
WP_000763554.1\|4988184_4988400_+	hypothetical protein	NA	NA	NA	NA
WP_000132039.1\|4988396_4989080_+	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	1.1e-32	36.1
WP_000631813.1\|4989076_4989307_+	hypothetical protein	NA	NA	NA	NA
WP_000206212.1\|4989296_4989503_+	hypothetical protein	NA	NA	NA	NA
WP_001170114.1\|4989504_4989954_+	regulatory protein GemA	A4JWM5	Burkholderia_virus	6.1e-24	45.1
WP_001281701.1\|4989925_4990315_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	1.5e-31	54.2
4995234:4995249	attR	NA	NA	NA	NA

DBSCAN-SWA_16

5201641 : 5249890

Enterobacteria_phage(54.72%)

terminase,portal,tRNA,transposase,integrase,holin,capsid,lysis,tail,head

attL 5199959:5199973|attR 5231093:5231107

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5199959:5199973	attL	NA	NA	NA	NA
WP_001295972.1\|5201641_5202748_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476093.1\|5202801_5203263_-	phosphatase NudJ	NA	NA	NA	NA
WP_001248677.1\|5203272_5203926_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000444487.1\|5204097_5205348_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
WP_000741335.1\|5205461_5206604_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z02	Phage_21	3.6e-206	100.0
WP_000088653.1\|5206593_5206830_-	excisionase	NA	NA	NA	NA
WP_000490213.1\|5206969_5207209_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.7e-39	96.2
WP_000002139.1\|5207192_5207519_-	ASCH domain-containing protein	A5VWB6	Enterobacteria_phage	9.8e-48	95.7
WP_000763374.1\|5207518_5207740_-	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	2.3e-32	93.2
WP_021533932.1\|5207838_5208120_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	3.0e-45	95.7
WP_000548516.1\|5208130_5208322_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	1.8e-25	93.7
WP_000149537.1\|5208294_5208477_-	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	1.8e-27	98.3
WP_000186848.1\|5208473_5209154_-	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	1.6e-132	100.0
WP_000100847.1\|5209150_5209936_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995418.1\|5209941_5210238_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	8.9e-48	98.0
WP_000233576.1\|5210313_5210520_-	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
WP_000858975.1\|5211115_5211805_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.8e-92	75.0
WP_001067458.1\|5211909_5212140_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
WP_001182900.1\|5212209_5212749_+	hypothetical protein	K7PJT7	Enterobacteria_phage	2.6e-61	67.0
WP_000147894.1\|5212745_5213765_+	replication protein	A0A0M5M7Y1	Salmonella_phage	8.8e-111	64.1
WP_000788794.1\|5213761_5214463_+	replication protein P of bacteriophage	M1FJ72	Enterobacteria_phage	1.5e-125	97.0
WP_022645049.1\|5214712_5218978_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA
WP_000422741.1\|5219123_5219549_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
WP_000624722.1\|5219545_5219896_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_000080195.1\|5219926_5221540_+\|transposase	IS66-like element ISEc23 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
WP_029700859.1\|5221566_5222598_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_072147164.1\|5222947_5223049_+	hypothetical protein	NA	NA	NA	NA
WP_001053005.1\|5223045_5223501_+	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	1.6e-59	66.9
WP_000224914.1\|5223500_5223671_+	hypothetical protein	K7P7K0	Enterobacteria_phage	2.4e-13	69.8
WP_000774479.1\|5223663_5223954_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	2.3e-48	95.8
WP_001099488.1\|5223950_5224313_+	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	1.6e-59	95.7
WP_000971096.1\|5224309_5224450_+	YlcG family protein	K7PHH3	Enterobacteria_phage	8.5e-09	68.9
WP_001097224.1\|5224446_5225136_+	antiterminator Q	I6PDF8	Cronobacter_phage	4.9e-57	48.5
WP_000544528.1\|5225457_5225763_+\|holin	phage holin family protein	A0A286N2Q5	Klebsiella_phage	7.0e-40	87.6
WP_001180486.1\|5225749_5226226_+	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	7.3e-84	94.9
WP_001228695.1\|5226442_5226625_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_001298464.1\|5226715_5227009_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	7.0e-45	92.8
WP_000830178.1\|5227489_5227816_+	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_000881610.1\|5228022_5228205_+	hypothetical protein	NA	NA	NA	NA
WP_000453620.1\|5228768_5229314_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	6.8e-94	98.3
WP_001027261.1\|5229288_5231214_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.1
5231093:5231107	attR	NA	NA	NA	NA
WP_000198149.1\|5231210_5231417_+	gpW family protein	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001295977.1\|5231413_5233015_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.4e-309	98.9
WP_000123268.1\|5232995_5234315_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.1e-230	97.7
WP_001295978.1\|5234324_5234657_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	3.8e-55	99.1
WP_000063293.1\|5234712_5235738_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	7.8e-192	99.4
WP_000158908.1\|5235779_5236178_+	DNA-packaging protein FI	A0A0K2FIR1	Enterobacteria_phage	1.0e-62	98.5
WP_000753018.1\|5236189_5236543_+\|head,tail	head-tail joining protein	A0A2R9YJJ5	Escherichia_phage	2.2e-61	98.3
WP_000985120.1\|5236554_5237133_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	92.7
WP_000683150.1\|5237129_5237525_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	2.9e-70	98.5
WP_001295979.1\|5237532_5238273_+\|tail	phage tail protein	A0A2I6TC77	Escherichia_phage	1.6e-130	98.0
WP_000479203.1\|5238288_5238711_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.2e-68	94.3
WP_000459457.1\|5238692_5239127_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_000840216.1\|5239119_5241681_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	98.4
WP_000847375.1\|5241677_5242007_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	2.8e-58	99.1
WP_001152626.1\|5242006_5242705_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	5.1e-134	99.6
WP_023146277.1\|5242709_5243453_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.0e-148	97.2
WP_023149564.1\|5243389_5243992_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-88	85.6
WP_001531667.1\|5244052_5247535_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.3
WP_000290538.1\|5247593_5249615_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0E3M0V5	Enterobacteria_phage	7.2e-181	72.3
WP_000654172.1\|5249611_5249890_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	9.9e-25	55.4

DBSCAN-SWA_17

5389760 : 5428740

Stx2-converting_phage(30.95%)

terminase,portal,integrase,holin,capsid,tail,head

attL 5385934:5385948|attR 5391844:5391858

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5385934:5385948	attL	NA	NA	NA	NA
WP_000113700.1\|5389760_5390891_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21940	Phage_21	3.4e-103	51.4
WP_000113189.1\|5390868_5391117_-	excisionase	NA	NA	NA	NA
WP_078175606.1\|5391181_5393653_-	exonuclease	A0A192Y6E0	Salmonella_phage	5.7e-55	56.0
5391844:5391858	attR	NA	NA	NA	NA
WP_001090200.1\|5393745_5393937_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449179.1\|5393933_5394122_-	hypothetical protein	NA	NA	NA	NA
WP_001171951.1\|5394687_5394906_-	hypothetical protein	NA	NA	NA	NA
WP_000379589.1\|5395065_5395221_-	DUF1391 family protein	M4QQ57	Salicola_phage	8.8e-07	51.1
WP_000103687.1\|5395493_5396210_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	1.7e-52	42.0
WP_000471549.1\|5396259_5396475_+	transcriptional regulator	NA	NA	NA	NA
WP_000693845.1\|5396471_5396897_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000095675.1\|5396919_5397882_+	helix-turn-helix domain-containing protein	S5FM81	Shigella_phage	1.4e-70	56.4
WP_000788950.1\|5397888_5398635_+	ATP-binding protein	A0A088CBP4	Shigella_phage	4.0e-113	83.8
WP_000450998.1\|5398656_5399427_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.6e-80	64.5
WP_001151161.1\|5399442_5399868_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.2e-63	94.0
WP_000150294.1\|5400042_5400708_+	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_000018429.1\|5400888_5401101_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	5.2e-26	90.0
WP_001329966.1\|5401268_5401541_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.5e-12	49.2
WP_001265085.1\|5401542_5402598_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.0e-90	48.4
WP_000140014.1\|5402598_5402979_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	2.9e-35	64.5
WP_001513213.1\|5402975_5403797_+	antitermination protein	K7P7B9	Enterobacteria_phage	1.7e-80	60.1
WP_000917751.1\|5404023_5404221_+	hypothetical protein	Q9MC00	Enterobacteria_phage	6.1e-29	98.5
WP_000024331.1\|5404372_5405422_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	4.4e-198	95.4
WP_023142244.1\|5406223_5406355_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	1.1e-05	100.0
WP_000871291.1\|5406635_5406971_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
WP_016230612.1\|5407231_5409085_+	SASA family carbohydrate esterase	Q08JA2	Stx2-converting_phage	0.0e+00	90.3
WP_000284510.1\|5409235_5409451_+\|holin	class II holin family protein	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_000193278.1\|5409455_5409800_+	YdfR family protein	K7PGU6	Enterobacteria_phage	2.8e-37	95.2
WP_000369850.1\|5409765_5410038_-	hypothetical protein	NA	NA	NA	NA
WP_000992071.1\|5410143_5410677_+	lysozyme	Q6H9V6	Enterobacteria_phage	4.8e-100	95.5
WP_001043230.1\|5410754_5410967_+	hypothetical protein	A0A0M4S639	Salmonella_phage	2.7e-06	60.5
WP_032140280.1\|5411231_5411318_+	hypothetical protein	NA	NA	NA	NA
WP_012578895.1\|5411539_5411725_+	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	2.7e-18	98.4
WP_000736382.1\|5411810_5412026_+	hypothetical protein	NA	NA	NA	NA
WP_000095741.1\|5412224_5412425_-	YlcI/YnfO family protein	H6WZK6	Escherichia_phage	4.3e-30	98.5
WP_000829185.1\|5412466_5412832_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	2.5e-60	93.4
WP_000958366.1\|5413122_5413686_+\|terminase	terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	1.6e-82	92.0
WP_001296023.1\|5413682_5415344_+\|terminase	terminase large subunit	B6DZ98	Enterobacteria_phage	0.0e+00	98.7
WP_000173031.1\|5415407_5417345_+\|capsid	phage major capsid protein	H6WZL0	Escherichia_phage	0.0e+00	100.0
WP_001063099.1\|5417389_5417611_+	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
WP_000267294.1\|5417556_5420142_+\|portal	phage portal protein	A0A0P0ZDD0	Stx2-converting_phage	0.0e+00	100.0
WP_000125990.1\|5420138_5420465_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZBH1	Stx2-converting_phage	9.2e-54	100.0
WP_001007905.1\|5420474_5420825_+\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
WP_000573391.1\|5420821_5421268_+	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
WP_000133388.1\|5421264_5421609_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
WP_001275441.1\|5421675_5422392_+	immunoglobulin domain-containing protein	A0A0P0ZDV1	Stx2-converting_phage	3.6e-127	99.6
WP_000710949.1\|5422406_5422781_+\|tail	tail assembly protein	A0A0P0ZE84	Stx2-converting_phage	1.7e-64	99.2
WP_001513217.1\|5422876_5423086_+	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	1.5e-33	100.0
WP_000212991.1\|5423133_5426376_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	91.6
WP_000807937.1\|5426368_5426710_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	9.0e-60	95.6
WP_001296027.1\|5426709_5427408_+\|tail	phage minor tail protein L	B6DZB1	Enterobacteria_phage	5.8e-130	97.4
WP_000194730.1\|5427418_5428162_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	4.3e-147	97.6
WP_061089814.1\|5428107_5428740_+\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	3.0e-101	97.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018989

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2649 : 53205

Escherichia_phage(41.67%)

transposase,integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152398.1\|2649_3834_+\|transposase	ISAs1-like element ISKpn31 family transposase	NA	NA	NA	NA
WP_004152397.1\|4110_5430_+\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
WP_004199234.1\|5679_6561_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
WP_004152394.1\|6848_7628_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_004199214.1\|7624_8650_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152392.1\|8756_11786_-\|transposase	IS3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004152391.1\|11895_13611_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_001404092.1\|13905_14061_+	hypothetical protein	NA	NA	NA	NA
WP_001145103.1\|14109_15102_+	hypothetical protein	NA	NA	NA	NA
WP_004152390.1\|15128_15290_+	hypothetical protein	NA	NA	NA	NA
WP_004152389.1\|15498_16110_-	DUF2913 family protein	NA	NA	NA	NA
WP_004152388.1\|16093_16657_-	hypothetical protein	NA	NA	NA	NA
WP_004152386.1\|17875_18733_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_004171450.1\|18725_18803_-	RepA leader peptide Tap	NA	NA	NA	NA
WP_013609506.1\|19034_19304_-	replication regulatory protein RepA	NA	NA	NA	NA
WP_014343478.1\|19421_19901_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	2.7e-17	31.7
WP_004152383.1\|20076_20385_-	hypothetical protein	K7PKY8	Enterobacterial_phage	1.1e-08	31.7
WP_004152382.1\|20381_21032_-	DUF2726 domain-containing protein	NA	NA	NA	NA
WP_004153014.1\|21087_21732_-	hypothetical protein	NA	NA	NA	NA
WP_015060010.1\|21781_22384_-	hypothetical protein	NA	NA	NA	NA
WP_004152380.1\|22544_23138_-	fertility inhibition protein FinO	NA	NA	NA	NA
WP_004152379.1\|23209_23935_-	type-F conjugative transfer system pilin acetylase TraX	A0A1D6ZIU7	Xanthomonas_phage	7.1e-06	28.8
WP_004153015.1\|24015_29277_-	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA
WP_004198206.1\|31717_32407_-	hypothetical protein	NA	NA	NA	NA
WP_004152622.1\|32598_33330_-	complement resistance protein TraT	NA	NA	NA	NA
WP_004152623.1\|33513_34062_-	conjugal transfer entry exclusion protein TraS	NA	NA	NA	NA
WP_004152624.1\|34074_36924_-	conjugal transfer mating pair stabilization protein TraG	NA	NA	NA	NA
WP_004165169.1\|36923_38303_-	conjugal transfer protein TraH	NA	NA	NA	NA
WP_004152679.1\|38280_38724_-	F-type conjugal transfer protein TrbF	NA	NA	NA	NA
WP_004152678.1\|38769_39327_-	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB	NA	NA	NA	NA
WP_004144400.1\|39298_39538_-	type-F conjugative transfer system pilin chaperone TraQ	NA	NA	NA	NA
WP_004152677.1\|39548_40301_-	type-F conjugative transfer system pilin assembly protein TraF	NA	NA	NA	NA
WP_004152676.1\|40321_40648_-	hypothetical protein	NA	NA	NA	NA
WP_004152675.1\|40660_40909_-	hypothetical protein	NA	NA	NA	NA
WP_004152674.1\|40886_41141_-	conjugal transfer protein TrbE	NA	NA	NA	NA
WP_078175487.1\|41172_41862_-	conjugal transfer protein TraN	NA	NA	NA	NA
WP_001067855.1\|41909_42614_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_004201232.1\|44405_45092_+	NYN domain-containing protein	NA	NA	NA	NA
WP_004201234.1\|45229_45967_+	hypothetical protein	NA	NA	NA	NA
WP_004201235.1\|46486_47956_-	HNH endonuclease	G0X580	Salmonella_phage	5.5e-21	51.3
WP_001067855.1\|48426_49131_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001039463.1\|49882_50269_+	hypothetical protein	NA	NA	NA	NA
WP_000861580.1\|50277_50469_+	hypothetical protein	NA	NA	NA	NA
WP_000807690.1\|51480_52236_+	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	4.5e-136	96.0
WP_001067855.1\|52500_53205_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_2

57551 : 70080

Escherichia_phage(33.33%)

integrase

attL 55368:55385|attR 74809:74826

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
55368:55385	attL	NA	NA	NA	NA
WP_001776119.1\|57551_58079_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.7e-21	39.5
WP_001776120.1\|58111_58543_-	hypothetical protein	NA	NA	NA	NA
WP_013438824.1\|58674_58851_-	hypothetical protein	NA	NA	NA	NA
WP_001776122.1\|59022_59988_-	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	1.6e-58	42.7
WP_015060092.1\|60119_60389_-	hypothetical protein	NA	NA	NA	NA
WP_004178082.1\|60457_61945_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_000776034.1\|62350_62782_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.6e-29	53.3
WP_004118291.1\|62781_64053_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	4.9e-151	63.3
WP_000064120.1\|64134_65109_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	2.6e-88	54.4
WP_000368714.1\|65108_66314_-	AAA family ATPase	A0A077SL49	Escherichia_phage	2.4e-163	69.6
WP_000339857.1\|66728_66998_+	hypothetical protein	NA	NA	NA	NA
WP_004118283.1\|67354_68221_-	replication initiation protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
WP_032409716.1\|68755_68860_+	hypothetical protein	NA	NA	NA	NA
WP_000764642.1\|68988_69246_+	hypothetical protein	NA	NA	NA	NA
WP_000015958.1\|69303_70080_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	6.4e-53	92.9
74809:74826	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP018990

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

90722 : 125184

Stx2-converting_phage(28.57%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023149734.1\|90722_92294_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.9e-169	58.5
WP_000968309.1\|93048_93231_+	hypothetical protein	NA	NA	NA	NA
WP_015387399.1\|93417_93624_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_000083833.1\|93907_94165_+	replication regulatory protein RepA	NA	NA	NA	NA
WP_032336874.1\|94400_94475_+	RepA leader peptide Tap	NA	NA	NA	NA
WP_000410951.1\|96234_97455_+	arginine deiminase	NA	NA	NA	NA
WP_000440183.1\|97465_98377_+	carbamate kinase	NA	NA	NA	NA
WP_000154545.1\|98461_99466_+	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_000514417.1\|99513_100917_+	YfcC family protein	NA	NA	NA	NA
WP_001496175.1\|100997_101477_+	ArgR family transcriptional regulator	NA	NA	NA	NA
WP_000080227.1\|101833_102055_-	hypothetical protein	NA	NA	NA	NA
WP_000624725.1\|102085_102436_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_059330006.1\|102432_102795_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	9.0e-34	88.5
WP_032152936.1\|103633_104212_+	DUF2726 domain-containing protein	NA	NA	NA	NA
WP_000005489.1\|104624_104978_-	hypothetical protein	NA	NA	NA	NA
WP_000156883.1\|105449_106472_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000083821.1\|106876_107134_+	replication regulatory protein RepA	NA	NA	NA	NA
WP_001365705.1\|107368_107443_+	RepA leader peptide Tap	NA	NA	NA	NA
WP_032152935.1\|107435_108293_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_000616807.1\|109231_109885_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000557619.1\|109977_110235_+	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA
WP_001398199.1\|110167_110569_+	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA
WP_001553819.1\|110705_113603_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	4.2e-182	37.8
WP_000509965.1\|113697_114303_+	recombinase family protein	A0A1S5Y2X8	uncultured_archaeal_virus	9.4e-20	35.3
WP_001214976.1\|115064_115472_+	cysteine hydrolase	NA	NA	NA	NA
WP_000058717.1\|115609_116494_+	EamA family transporter	NA	NA	NA	NA
WP_000804064.1\|116525_117725_-	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
WP_000164043.1\|117830_118481_+	tetracycline resistance transcriptional repressor TetR(A)	NA	NA	NA	NA
WP_032140899.1\|118512_118755_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|120376_121081_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000219391.1\|121202_122108_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_000004159.1\|122104_123343_+	MFS transporter	NA	NA	NA	NA
WP_001137892.1\|123342_123927_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001389365.1\|124419_125184_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018991

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018989

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP018990

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection