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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP019957 Bordetella pertussis strain Pelita III chromosome, complete genome 5 crisprs cas3,DinG,csa3,DEDDh 0 0 28 0

Results visualization

1. NZ_CP019957
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019957_1 252849-252933 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019957_2 412764-412857 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019957_3 1021356-1021450 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019957_4 1897009-1897136 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019957_5 3446189-3446298 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 71085 60 Natrialba_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_2 78683 : 124171 44 Planktothrix_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_3 137255 : 209779 60 Bacillus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_4 217711 : 333593 108 uncultured_Caudovirales_phage(12.5%) tRNA,protease,transposase NA
DBSCAN-SWA_5 393116 : 447584 48 Heterosigma_akashiwo_virus(14.29%) transposase NA
DBSCAN-SWA_6 486294 : 528249 40 Bacillus_virus(11.11%) integrase,transposase attL 508654:508671|attR 533281:533298
DBSCAN-SWA_7 655403 : 726233 57 Acanthocystis_turfacea_Chlorella_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_8 730133 : 780357 43 Catovirus(33.33%) transposase,tRNA NA
DBSCAN-SWA_9 1049383 : 1161699 100 uncultured_Mediterranean_phage(17.65%) tRNA,holin,transposase NA
DBSCAN-SWA_10 1179269 : 1232199 40 Erysipelothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_11 1323277 : 1388585 59 Bacillus_virus(18.18%) transposase,tRNA NA
DBSCAN-SWA_12 1416700 : 1483200 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_13 1525480 : 1584752 55 Bacillus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_14 1628358 : 1694689 58 Streptococcus_virus(11.11%) transposase NA
DBSCAN-SWA_15 1730644 : 1786235 49 Tetraselmis_virus(25.0%) transposase NA
DBSCAN-SWA_16 1793531 : 1912880 109 Moraxella_phage(10.34%) protease,tRNA,transposase NA
DBSCAN-SWA_17 2223308 : 2274945 47 Erysipelothrix_phage(33.33%) transposase NA
DBSCAN-SWA_18 2303113 : 2353867 48 Staphylococcus_phage(11.11%) tRNA,protease,transposase NA
DBSCAN-SWA_19 2735050 : 2775719 45 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_20 2800817 : 2861966 48 Bacillus_virus(20.0%) tRNA,transposase NA
DBSCAN-SWA_21 2885891 : 2942905 44 Pelagibacter_phage(20.0%) protease,transposase NA
DBSCAN-SWA_22 2956913 : 3016247 56 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_23 3026022 : 3077578 48 Ostreococcus_lucimarinus_virus(16.67%) transposase NA
DBSCAN-SWA_24 3150900 : 3214734 58 Pseudomonas_phage(30.0%) protease,tRNA,transposase NA
DBSCAN-SWA_25 3394742 : 3515018 103 Acinetobacter_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_26 3529956 : 3588692 50 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_27 3594858 : 3635611 47 uncultured_Caudovirales_phage(20.0%) terminase,tail,protease,transposase NA
DBSCAN-SWA_28 4004590 : 4069502 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage