CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019780	Bartonella sp. A1379B, complete genome	1 crisprs	DEDDh	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019780_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019780_1

342771-342865

Orphan

Consensus_repeat	Method
TAACGACAGGTATTTCTGTTTCAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019780_1

>merge|NZ_CP019780|1|342771-342865|CRISPRCasFinder
TAACGACAGGTATTTCTGTTTCAAAAGCATGGGGGGTTGTTGTCGCTGATAGATTGGTCTTAAAAGACATAACGACAGGTATTTCTGTTTCAAAA

>NZ_CP019780|1|1|342771-342865|CRISPRCasFinder
TAACGACAGGTATTTCTGTTTCAAAA	GCATGGGGGGTTGTTGTCGCTGATAGATTGGTCTTAAAAGACA
TAACGACAGGTATTTCTGTTTCAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019780.1\|WP_035006169.1\|350587_351457_-\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|234786
NZ_CP019780.1\|WP_035006160.1\|361724_362270_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226335
NZ_CP019780.1\|WP_035006174.1\|336933_337827_+\|outer-membrane-protein-assembly-factor-BamD	unknown	unknown	gnl\|CDD\|274513
NZ_CP019780.1\|WP_078692312.1\|332572_333868_+\|cell-division-protein-FtsA	unknown	unknown	gnl\|CDD\|223918
NZ_CP019780.1\|WP_078673641.1\|358736_361184_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273429
NZ_CP019780.1\|WP_035006186.1\|328152_329580_+\|UDP-N-acetylmuramate--L-alanine-ligase	unknown	unknown	gnl\|CDD\|234757
NZ_CP019780.1\|WP_035006184.1\|329557_330535_+\|UDP-N-acetylmuramate-dehydrogenase	unknown	unknown	gnl\|CDD\|237553
NZ_CP019780.1\|WP_035006156.1\|363272_364580_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|182433
NZ_CP019780.1\|WP_078673640.1\|348743_350570_-\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|238518
NZ_CP019780.1\|WP_078673635.1\|335910_336777_+\|UDP-3-O-acyl-N-acetylglucosamine-deacetylase	unknown	unknown	gnl\|CDD\|237294
NZ_CP019780.1\|WP_035006183.1\|330759_331680_+\|D-alanine--D-alanine-ligase	unknown	unknown	gnl\|CDD\|234948
NZ_CP019780.1\|WP_035006167.1\|351458_352058_-\|SCO-family-protein	unknown	unknown	gnl\|CDD\|376869
NZ_CP019780.1\|WP_078692544.1\|345805_348562_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|273608
NZ_CP019780.1\|WP_035006178.1\|333934_335686_+\|cell-division-protein-FtsZ	unknown	unknown	gnl\|CDD\|236468
NZ_CP019780.1\|WP_078692314.1\|339607_341785_+\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP019780.1\|WP_078673633.1\|331667_332576_+\|FtsQ-type-POTRA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224505
NZ_CP019780.1\|WP_078692545.1\|352690_355357_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|273608
NZ_CP019780.1\|WP_078692313.1\|337833_339501_+\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|223571
NZ_CP019780.1\|WP_078692316.1\|362886_363192_+\|DUF2853-family-protein	unknown	unknown	gnl\|CDD\|378540
NZ_CP019780.1\|WP_078673642.1\|361532_361712_-\|DUF4169-family-protein	unknown	unknown	gnl\|CDD\|372717

Protein	Function_ID	Function_description	E-value
NZ_CP019780.1\|WP_035006169.1\|350587_351457_-\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|234786	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase.	1.18612e-79
NZ_CP019780.1\|WP_035006160.1\|361724_362270_-\|hypothetical-protein	gnl\|CDD\|226335	COG3814, COG3814, Uncharacterized protein conserved in bacteria [Function unknown].	1.4798e-62
NZ_CP019780.1\|WP_035006174.1\|336933_337827_+\|outer-membrane-protein-assembly-factor-BamD	gnl\|CDD\|274513	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). [Protein fate, Protein and peptide secretion and trafficking].	4.10944e-87
NZ_CP019780.1\|WP_078692312.1\|332572_333868_+\|cell-division-protein-FtsA	gnl\|CDD\|223918	COG0849, ftsA, Cell division ATPase FtsA [Cell division and chromosome partitioning].	3.01042e-144
NZ_CP019780.1\|WP_078673641.1\|358736_361184_-\|AAA-family-ATPase	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP019780.1\|WP_035006186.1\|328152_329580_+\|UDP-N-acetylmuramate--L-alanine-ligase	gnl\|CDD\|234757	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional.	0
NZ_CP019780.1\|WP_035006184.1\|329557_330535_+\|UDP-N-acetylmuramate-dehydrogenase	gnl\|CDD\|237553	PRK13905, murB, UDP-N-acetylmuramate dehydrogenase.	2.84193e-145
NZ_CP019780.1\|WP_035006156.1\|363272_364580_-\|MFS-transporter	gnl\|CDD\|182433	PRK10406, PRK10406, alpha-ketoglutarate transporter; Provisional.	0
NZ_CP019780.1\|WP_078673640.1\|348743_350570_-\|aminopeptidase-P-family-protein	gnl\|CDD\|238518	cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.	3.24183e-121
NZ_CP019780.1\|WP_078673635.1\|335910_336777_+\|UDP-3-O-acyl-N-acetylglucosamine-deacetylase	gnl\|CDD\|237294	PRK13186, lpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase.	3.12315e-142
NZ_CP019780.1\|WP_035006183.1\|330759_331680_+\|D-alanine--D-alanine-ligase	gnl\|CDD\|234948	PRK01372, ddl, D-alanine--D-alanine ligase; Reviewed.	1.32119e-171
NZ_CP019780.1\|WP_035006167.1\|351458_352058_-\|SCO-family-protein	gnl\|CDD\|376869	pfam02630, SCO1-SenC, SCO1/SenC. This family is involved in biogenesis of respiratory and photosynthetic systems. SCO1 is required for a post-translational step in the accumulation of subunits COXI and COXII of cytochrome c oxidase. SenC is required for optimal cytochrome c oxidase activity and maximal induction of genes encoding the light-harvesting and reaction centre complexes of R. capsulatus.	2.17484e-56
NZ_CP019780.1\|WP_078692544.1\|345805_348562_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|273608	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain. A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	4.14943e-22
NZ_CP019780.1\|WP_035006178.1\|333934_335686_+\|cell-division-protein-FtsZ	gnl\|CDD\|236468	PRK09330, PRK09330, cell division protein FtsZ; Validated.	0
NZ_CP019780.1\|WP_078692314.1\|339607_341785_+\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP019780.1\|WP_078673633.1\|331667_332576_+\|FtsQ-type-POTRA-domain-containing-protein	gnl\|CDD\|224505	COG1589, FtsQ, Cell division septal protein [Cell envelope biogenesis, outer membrane].	4.1948e-39
NZ_CP019780.1\|WP_078692545.1\|352690_355357_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|273608	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain. A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	6.22942e-22
NZ_CP019780.1\|WP_078692313.1\|337833_339501_+\|DNA-repair-protein-RecN	gnl\|CDD\|223571	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair].	0
NZ_CP019780.1\|WP_078692316.1\|362886_363192_+\|DUF2853-family-protein	gnl\|CDD\|378540	pfam11015, DUF2853, Protein of unknown function (DUF2853). This bacterial family of proteins has no known function.	5.37358e-17
NZ_CP019780.1\|WP_078673642.1\|361532_361712_-\|DUF4169-family-protein	gnl\|CDD\|372717	pfam13770, DUF4169, Domain of unknown function (DUF4169).	2.43337e-10

>NZ_CP019780.1|WP_078692314.1|339607_341785_+|NAD-dependent-DNA-ligase-LigA
MDKNVIKNLTALEAASELEWLAKEIARHDVLYHRDDQPEISDAEYDALCRRNEEIEALFPELIRADSPSSKIGAPISEKFEKSIHAQPMLSLDNAFNFEDVSEFIERIRRFLRLPETQTIEMTAEPKIDGLSLSLRYEAGKLVCAITRGNGSIGENVTTNARTIADIPEILQGNFPDIIEVRGEVYMGQKDFQLLNINQQKEGKLVFANPRNAAAGSLRQLDSRITASRNLKFFAYAWGEVSEMPAESQIGMMKKLKEYGFIINPLTKVFEKVEDLISYYHSIEECRQSLDYDIDGIVYKVNDLMLQTRLGFVARSPRWAIAHKFPAEKAIAFLEDIDIQVGRTGALTPVARLTPITVGGVVITNASLHNEDYIKGIGHKGELIREGRDIRVGDTVIIQRAGDVIPQIVDVLVEKRSKDTPAFIFPHVCPVCGSHAVREEGETVRRCTGGLICSAQAIERICHFVSRNAFDIEGFGRKQVEFFFHAQDKTLCIRSPVDIFTLQRRQENSLRRLENMEGFGVVSVRKLYNAINARREISLSRFLFALGIRHIGEVKAQRLARAYQNYIAFETAAMTAIMPPDKNSEGNEIWKELTNIEGIGSRVGEAIIDFYQEVHNRDVLSALLKEVTPLHEAPIAIDYSPIVGKIIVFTGTLEHMSRDEAKSLAERLGAKTSNSISKKTDLLVAGFGAGSKLVKAQQLGIEVLDEKNWLKLIDGHYIENFHLKQ
>NZ_CP019780.1|WP_078692313.1|337833_339501_+|DNA-repair-protein-RecN
MLVQLSIHNIVLIERLDIHFTEGLSVLTGETGTGKSILLDSLSLALGGRGDSSLVRHGMTQGQVTAVFNVPVSHPVRRLICENGFDCEGDIILRRVQSSDGRSRGFLNDQVISITLMRDIGRMLVEIHGQHDDRAFVDISTHRQLLDAFGGLESEVENLRECYRIWHTLKERVQQQHVKVESAVREVDYLRASVEELDKFDFKVDEEDALSLRRADMLKLEKIATDIREADDLLGGSKSPIPVLANLVRRLERKIPEAQDLIIPIVKSIDDALRALTTAQACIEAAMQALDFDTNELERIEERLFALRGFSRKYHVSGDELAQLRDKMCAELADFDSAQATLVHLETEAQKAQKEYDILAQALSIKRQEVARRLSSSIMDELPALKLEKAEFIVEIQSDAEKYSPDGIDRVEYWVRTNPGTRAGPILSVASGGELSRFLLALKVVLADRGSAPTLIFDEIDTGVGGAVAAAIGQRLLRLSKNIQVFAVTHAPQVASKAHNHFLISKVESGDTGCFVTSVNKIETHERAEEIARMLAGEQVTEEARAAAQKLLAQT
>NZ_CP019780.1|WP_035006174.1|336933_337827_+|outer-membrane-protein-assembly-factor-BamD
MKKPDKYIGNIAHRKLTIVRKVLIGVLLGGTCFLAGCLGKGKNILDPSMHVLKIDPPDVLYNQALANLDVGRLSEAAKKFAIIEKQYAYTDWGRKSLIMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYIIGLSSFRRIPDVTRDQQDTKRAIAAMQVLIERYPESEYVSDAKAKIRFGREQLAGKEMQIGRYYEEGQRYLAASRRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNYPESKWYKFSYDLLQKNSISPKEHKSSWISRALSGNKSKVN
>NZ_CP019780.1|WP_078673635.1|335910_336777_+|UDP-3-O-acyl-N-acetylglucosamine-deacetylase
MGQKYQSTLKDTLIFEGRGVHSGHLSVMKIEPADIECGIVFKRYGIDGKEQIFPAHASQVGATELSTVLGHGDIRVETIEHLMAAIAAYNLDNLIIEVSSNEVPILDGASWHYCQGFEKIGIVQQTALRSYFVIKKTVRVETANGMAEFLPFDGCRFDVTISFPTPVIGKQHLSFDLTAQGFKNDLSCARTFGFVKDVEKLWTSGKGIGSSLENSLIIGLDDQIINPAGAYFENEFVRHKMLDAIGDTALLGAPFIGLFRSYCSGHALNSKLVKAVLQDESCYEKSNM
>NZ_CP019780.1|WP_035006178.1|333934_335686_+|cell-division-protein-FtsZ
MTINLHRPDIAELKPRITVFGVGGGGGNAVNNMINAGLQGVDFVVANTDAQALAMSKAERVIQLGAAVTEGLGAGALPEVGQAAADECIDEIIDHLADSHMVFITAGMGGGTGTGAAPVVANAAREKGILTVGVVTKPFQFEGARRMKTAEAGIEELQKSVDTLIVIPNQNLFRIANEKTTFSDAFAMADQVLYSGVASITDLMIKEGLINLDFADVRSVMHEMGRAMMGTGEASGDGRALAAAEAAIANPLLDDTSMRGARGLLISITGGRDMTLFEVDEAANRIREEVDADANVIFGAIDDESLEGVIRVSVVATGIDREINDIIQPSHPKFHRPVASMRKNDTGVTQTASQSSSSLRSESMVEVIEALEVEMKQPIEEPFCPKSQFFVQTTDTTYTPRTVNTAPYGQNIHAKTSSSLRMQAGCVSQQPMARAVGMEATAHVLDDKVGVAEQKKKQVQTQSCSTPVRMPELKDFPSSIRSQSTNFSSVDQGPRNLWQRLKQSLTYREEIEPEARLEPAVNSSSHKDFHISSANPQDLSQDTSVYMPRYSTESQQPASQDQNICISEEDELEIPAFLRRQAN
>NZ_CP019780.1|WP_078692312.1|332572_333868_+|cell-division-protein-FtsA
MMFLKSHHGRGRKTRFLTVLDVGSSKVVCLIACLRPLKYPQHLHGRTHFMEVLGFGVQRSCGIKSGVVMDMLAAEQSIRLAVNAAEKMAGLVVDSVIVNFSSNRLKSTFVNGTVHLGGREVTARDMRMALANVSRKAFEAERHIMHSVPISYILDGDKGISDPVGMMGELFGVDVHVVTAETASLRNLEACINRAHLSVEAMVATPFASGLAVLINDEARLGAACIDFGAGTTTFSIFSEGKFVHADTLSIGGHHITLDVARGLSMSIEEAERLKVMYGSTLSESIDAHHMINVAEIGNERTQYPCAVLSRIIRARVEEILEMLRDCLSCSGFGHIVGKRVILTGGASQLIGLPEMARNILGRNVRIGRPLGVSRLPASAKGAAFSSAVGLLIYPQLAGFKEKTIHTTVRQLSTGTGGYFQRVGQWLRESF
>NZ_CP019780.1|WP_078673633.1|331667_332576_+|FtsQ-type-POTRA-domain-containing-protein
MYALNVGEMGILKALSTPIFPRFYRCFLRFILQFVFSDIHVPRYFGSFAVFSFFLLSLFYGIVSSGHVNRIIRLVTLNFGFVITHVDMSGNKNMTKQYVLKLLGLDVHPSIISFDVDKARSTLEQQIWIQSVDIRKIYPNRICISMVEREPYAIWQHDGVMDVIDDTGRIILPFQAGLIQNLPLVVGQGAQKAAKLFIQSLLPYSQFRDRIRAYVRVGDRRWDIFLENGVRIMLPEQGAVERLVALLKTNTAKDLFSRDALSIDLRLSDRITIALSDEVLAQHRATVMEEERILKVLKERNI
>NZ_CP019780.1|WP_035006183.1|330759_331680_+|D-alanine--D-alanine-ligase
MRGKHIAVLMGGLSSERSVSLSSGSACADILEAHGYSVTRVDVDSRIASVLEKLQPHIVFNALHGSFGEDGRIQGILEYLKIPYTHSGVMASALAMDKGRAKIIAASAGVPVAPSYVMDRCAIGSQHPLEPPYVIKPVHEGSSIGVIIVNGDEAFPPHNIVSSERMDKDEVIVEKYIPGRELTCAVLGDEVLDVCEIIPDQHFQFYDYDSKYKSGGSIHICPAQLSLNIYQKVQRMSLAAHQAIGCRGVSRSDFRFNEETEELIWLEINTQPGMTSTSLVPDIAKASGRTYSDIVKWIVEDASCMR
>NZ_CP019780.1|WP_035006184.1|329557_330535_+|UDP-N-acetylmuramate-dehydrogenase
MTNFRPIDGEGLLKKLQPALRGIRGKLMPNVNMRKVTWFRTGGLAEIFYQPSDEADLVLFFQSLPETIPVTIVGIGSNLLVRDGGIPGIVVRLSAKGFGQLKQVSSKRFLVGAAVAGKHLAAAALEAELSGFHFYHGIPGGCGGALKMNAGANGIETAERVVEVYALDRKGQRHILSVNDIHYSYRCCDVPDDFVFVAALLEGEQGNRHHIRAAMEEVALHRQKVQPIREKTGGSTFRNPVGTSAWRVIDEAGCRGLKIGGAQMSEMHCNFMINIDQATGYDLEKLGETVRARVFAHSGHLLQWEIQRIGQFEQDRIVSLFDQNN
>NZ_CP019780.1|WP_035006186.1|328152_329580_+|UDP-N-acetylmuramate--L-alanine-ligase
MKMPLNIGLIHFVGIGGIGMSGIAEVLHNLGYKVQGSDQTYNANVERLQNKGINICIGHRAENLGAAEVVIISTAIKKTNPEYIAAQKRHLPVVKRAEMLAELMRFRRTIAIGGTHGKTTTTSMVAALLDAGHFDPIVINGGIINAYGTNARMGDGDWMVVEADESDGTFLKLPADIAVVTNIDVEHLDHYGNFNAIREAFRQFVENVPFYGFAVMCIDHPEVQTLASRIHDRWVITYGANPQADIRFLNLSMEGQKACFDILIRSRKTGEKTEINNLILPMSGKHNVSNATAAIAIAHELGISPEAIKKGLAEFGGVKRRFTKTGNWNGVEIFDDYGHHPVEIKAVLHAARESAKGNIIAIMQPHRYTRLYHLFDDFSTCFNDADTVMITPVYAAGEEPIAGFGSKELVEHIQMAGHRDVHLINSLEDIISIVSRLAKSGDYVVFLGAGSITQWAYALPDQLMVLDNNDKFSAD
>NZ_CP019780.1|WP_078692544.1|345805_348562_+|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MKLGSRTFIVKECKESADGQINDKKYQLANSSKRNNRNNSKKQTNSEVSKTDGVIGIYSSSSDEGDREDSIEEVSTSDVNVNNVQILGPIHSDDDIYIGILLGEWGTIVANELTLKDLTIGISVVENSSVNADKTLISNNKIAVKAKGSSSIVELLDTNILVLKGDKGLFTTKGGYIDMQGIDKSDAGINFTLSSAVYMNTGEVSLEKVNIINDTINDNTSVQTNENVDYSRSAAVYMHPQSTFEMKEGKVHLKSGNGFVFDFSPYEDTEDYETADEDGDEDESDDEEDDEEEEKKENVNLENVDVKIEGDKYYGMYGVPSVSDDKDKEFERSATISLKKTNFIVPNSTAIYNGVKAELTFNLSDTKLSGGLLLEGTSGIINIKANNSQLEGGALISGSAEAHLKLENNSMWTLTKRKSRGDRGNEGTDNNKSFISTVTLKNSKIIFEKPSDNVYQTLSIGTGNSLVYTAEGNAELYLNSYLDQSNSDTDRLLIDGDVSGVTVVSVSTTAGHLGDKTGSGNTQGVSLIQVSGTAQEDSFKLKDDYITADNLPYQYVLSAYGPSSQLGQADPGQKLVGQNGKEGEHSSSNFWDYRLQIVPTVVPQLPSYLLLPHALFHTGLVDVSNQHELLEIMQSAFHEAAKKRKTNFFIRGYGSNHSYTSNLSVFEYGYGADLDYNNATAGIVFNTLESKDSTSSFGVMGGYGQLSLHPRAVKHSQKSVFDKWSGKLYVNLDHDTGFYANGFLSYDFFKGDVVTLSRGKTAELKGRLLNAALSGGQAIITGYHGFILEPQLQVIYQSLLFDEARDIDRFDIDLGKHDQLIGRIGGRLIKAFASSEKGHVVSFYSKLHVAHSYEKKRIVHFKDAFQLGAFGSTVETGAGVHAQLSNAIALHGDLLYQHKLTKAGFSGISVSGGLRYQF
>NZ_CP019780.1|WP_078673640.1|348743_350570_-|aminopeptidase-P-family-protein
MYQSFEISTNPTYAAKRVAALRKKIDHFGLDGFLVPHTDEHQGEYVPKHAQRLGWLTGFTGSAGIALILKDQAIIFTDGRYKLQVRQQTDSCIFNYEDLAICSPAQWLEKNKQKLSIGFDPWLHTINATAILRQALELKIGGKLIESETNLIDLIWNDQPKYPQTPLSIHPLKYTGCSTNEKLSQIRKNIKQSGANAFIFTDPSSIAWTFNIRGKDVSNSPFSLCFAIISITEKPILFIDSKKVGSKQRQYLKSYAKLYEPEELISNIKDHVQQGTVFALDPFLTCEKLRTVIEDTGGSFVRLRDPVILPRAIKNTTELNGSRRAHLCDGIALTRFLSWLDRQIPGTIDEISAAKKLEKFRIITTQEMGMKLEDLSFDTISAAGKNGAIIHYRVTTQTNKRLNAGELYLVDSGGQYREGTTDVTRTVAIGNIGEEEKRCFTLVLKGMIALSSARFPKGTRGQDIDVLARNALWKAGFDYAHGTGHGVGSYLSVHEGPQNLSRYGSQELIPGMIISNEPGYYREKAFGIRIENLMIVKPAQKITNGDIDMLSFETLTYCPIDRQLILIELLTTQEKQWLNDYHARVYQVNAPYLDKEDKKWLKKATMPL
>NZ_CP019780.1|WP_035006169.1|350587_351457_-|50S-ribosomal-protein-L11-methyltransferase
MSQQIRLYWTALKNEAEKFYARMEVAFEEEGYPLALTEIDDKNAIYEISLYVDQKNQKSASQRFSSILAIDPHKINIEILPNIDWVKKSLAELKPVCAGPFFIHGSHERQNIPPNVLPIEIEANQAFGTGHHGTTFGCLEMITKVIQNENPKNALDIGTGSGILAIGIAMLKPIVVLAADIDPIAIKVAQQNIRFNGVTDYVTAITITGFSDNKVASRAPFDLIVANILANPLIELAHNMVQALRKGGSIILSGIIEEQHDDVLKAYVKQGLKHIETYSQQGWITLHLK
>NZ_CP019780.1|WP_035006167.1|351458_352058_-|SCO-family-protein
MKNIIRILGLTVIFLAGVFTYDAFRNKPLGENFTLIASNGKIVTEADIRDKPAVIFFGYTMCPDSCPTTLMDLNRWLMEIGPDADRLGVWFVTVDPERDTPEVLHEYLSNFTDKIIGISGDPNAVHKMVASFNIVSEKVIGTDDSNYTYNHTAAIFLLKKGGKLAGIIPYNVEENENKLKDDIAITRLKKLVSSSTNKK
>NZ_CP019780.1|WP_078692545.1|352690_355357_+|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MGNHSERNNSRKRTDSETSETGGVIGIYSSSSDEENESEKEKKNTTSNVDVNNVQILGPVHSDDDIYIGILLGEWGTIVANELTLKDLTIGISVVENSSVNADKTLISNNKIAVKAKGSSSIVELLDTNILVLKGDKGLFTTKGGYIDMQGIDKSDAGINFTLSSAVYMNTGEVSLEKVNIINDTINDNTSVQTNENVDYSRSAAVYMHPQSTFEMKEGKVHLKSGNGFVFDFSPYEDTEDYETADEDGDEDESDDEEDDEEEEKKENVNLENVDVKIEGDKYYGMYGVPSVSDDKDKEFERSATISLKKTNFIVPNSTAIYNGVKAELTFNLSDTKLSGGLLLEGTSGIINIKANNSQLEGGALISGSAEAHLKLENNSMWTLTKRKSRGDRGNEGTDNNKSFISTVTLKNSKIIFEKPSDNVYQTLSIGTGNSLVYTAEGNAELYLNSYLDQSNSDTDRLLIDGDVSGVTVVSVSTTAGHLGDKTGSGNTQGVSLIQVSGTAQEDSFKLKDDYITADNLPYQYVLSAYGPSSQLGQADPGQKLVGQNGKEGEHSSSNFWDYRLQIVPTVVPQLPSYLLLPHALFHTGLVDVSNQHELLEIMQSAFHEAAKKRKTNFFIRGYGSNHSYTSNLSVFEYGYGADLDYNNATAGIVFNTLESKDSTSSFGVMGGYGQLSLHPRAVKHSQKSVFDKWSGKLYVNLDHDTGFYANGFLSYDFFKGDVVTLSRGKTAELKGRLLNAALSGGQAIITGYHGFILEPQLQVIYQSLLFDEARDIDRFDIDLGKHDQLIGRIGGRLIKAFASSEKGHVVSFYSKLHVAHSYEKKRIVHFKDAFQLGAFGSTVETGAGVHAQLSNAIALHGDLLYQHKLTKAGFSGISVSGGLRYQF
>NZ_CP019780.1|WP_078673641.1|358736_361184_-|AAA-family-ATPase
MNDFSDHITSLKNDVSPHKPENNSRLMTHISERKNTQYKPNYLEKLNPEQKQAVINTEGPVLVLAGAGTGKTRVLTTRISHILHLGLAHPKQILAVTFTNKAAHEMKTRIGELVGETVENMPWLGTFHSTGAKILRRHAELVGLKSNFTILDRDDVIRLLKQLIQAEGLDDKRWPARNLAMMIDSWKNQGLLPNSISEGDAYSFGNGIGRKLYRNYQDRLKNLNACDFGDLLLHSISIFQNNPDILREYHNKFRYILVDEYQDTNIAQYLWLRLLAQRHEKQINLCCVGDDDQSIYGWRGAKVDNILRFEQDFSPAKIIRLERNYRSTSHILKTASHLISHNQNRLGKTLFSDQINSDDEKVKIHAAWDSAEEARAIGEEIEQAQRAGHSLNHIAILVRASFQMREFEDRFVTLGLNYRVIGGPRFYERMEIRDALAYLRVVVQPADDLAFERIINIPKRGLGNATLRHLYNSARARSIPLFVAAAEIITTDELKPKIRNALRDVVENFYRWQSMLQHTPHTELAETILDDSGYTAMWQEDRSPEAPTRLENLKEMIRSMEQFENLRSFLEHVSLVMDSESNENMNAVNIMTLHSAKGLEFETVFLPGWEEGLFPHQRSLDEGGHSGLEEERRLAYVGITRAKKHLHIWCVSNRRIHGLWQSTIPSRFLNELPEEHIKITEIETSYGNYNQTHFKKQNPFRNNYSTPGWQRAQKNQTKTTHNNWRKQSAAHVEKICYGDIDLNFGIKQLRQQKNIEGTIIAKSVSNKSSAFSINDRIFHIKFGYGQIKAIDGSKLTIFFDKTGEKRVLDNFVIKA
>NZ_CP019780.1|WP_078673642.1|361532_361712_-|DUF4169-family-protein
MATIINLRQFRKQKKRTKLAIHAEENRYRFGRTKLEKLFDKKESLKAQKFLDQNHLSSD
>NZ_CP019780.1|WP_035006160.1|361724_362270_-|hypothetical-protein
MVQDQIRYDILVQDALRGVIRKVLLEVAKAGLPGNHHFFITFLTNAPGIKISPRLQKRYPDQMTIVLQHQFRDLSVSETAFEVTLSFGEITEKLVIPFNSIQVFYDPIAAFETAFDLPPSLISGENQNPETASCSPFTPSDKQKKENISTKISNLKTEKEPSNNDSKQSADIVSLDSFRKK
>NZ_CP019780.1|WP_078692316.1|362886_363192_+|DUF2853-family-protein
MVNDLENIKLYDVNPDEAVIERLRCRLTLVMRHQDASLVSTSDQKELERVVKWAQDVLDVDKENAQKAVAKVAEMMSGNRKKNRVTFYYLLAKQVNALDKI
>NZ_CP019780.1|WP_035006156.1|363272_364580_-|MFS-transporter
MENEETLALYDAKKRIRSIISSASGNLVEWYDFYVYSFTSIYFASQFFPSDGNVILQLFKAAIVFSIGFLMRPIGGWLFGFIADRYGRKRSMLISVFMMCSGSFLIAILPTYETIGASAAVLLLLLRMLQGLSVGGEYGTTATYMSEIALKNRRGFFSSFQYTTLIGGQLLASLVIFILALYLTEEQLKAWGWRIPFAIGGLGAIVAIYLRRSLHETTTKENRSKEKAGSIRELWRNHRKAFFLVIGFTAGGSLTFYTYTTYMQKYLITTTGFDKHTATTIMTIALFVFMLLQPAFGALADKIGTKTSLIIWSVLSVIFTIPGLYMIGNTNNSWVALSILIGMLCIISFYTSISGIVKAEMFPSSIRAMGVGLSYAIANALFGGSAESVALLLKDIGYEFIFYLYVTGMMTVAFIAVLLMPDARKSGYLQGDDIH

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

710747 : 717432

uncultured_Mediterranean_phage(66.67%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035006735.1\|710747_711866_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.0e-99	52.9
WP_078673792.1\|712276_712789_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	2.6e-47	59.6
WP_078692548.1\|712793_713393_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.3e-42	53.2
WP_035006330.1\|713395_713902_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	1.7e-22	33.8
WP_078673793.1\|713935_716704_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	5.3e-102	33.9
WP_035006333.1\|716943_717432_-	single-stranded DNA-binding protein	A0A0K1LLZ9	Caulobacter_phage	8.1e-46	60.7

DBSCAN-SWA_2

1163917 : 1227417

Sinorhizobium_phage(13.33%)

portal,tRNA,tail,terminase,capsid,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035007453.1\|1163917_1165405_-\|tRNA	histidine--tRNA ligase	A0A2K9L6G5	Tupanvirus	5.9e-31	27.1
WP_078692454.1\|1165994_1167092_+	TIGR04086 family membrane protein	NA	NA	NA	NA
WP_078673964.1\|1174375_1176364_+	M23 family metallopeptidase	A0A2P1JY73	Gordonia_phage	6.5e-17	39.5
WP_035006622.1\|1176949_1178368_-	sensor histidine kinase	NA	NA	NA	NA
WP_078673965.1\|1178584_1179139_-	RNA polymerase sigma factor	A0A0F6TH34	Sinorhizobium_phage	7.3e-19	38.7
WP_035006619.1\|1179135_1179351_-	hypothetical protein	NA	NA	NA	NA
WP_078673966.1\|1179513_1180308_+	response regulator	NA	NA	NA	NA
WP_035006615.1\|1180323_1181337_+	histidine kinase	NA	NA	NA	NA
WP_078692457.1\|1181360_1181585_-	hypothetical protein	NA	NA	NA	NA
WP_035006614.1\|1181772_1182066_+	hypothetical protein	NA	NA	NA	NA
WP_078692458.1\|1182192_1182612_+	hypothetical protein	NA	NA	NA	NA
WP_035006612.1\|1182674_1183406_-	DUF4167 domain-containing protein	NA	NA	NA	NA
WP_078692460.1\|1184160_1185078_+	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA
WP_078692461.1\|1185321_1185771_-	hypothetical protein	NA	NA	NA	NA
WP_035006609.1\|1186240_1186492_-	hypothetical protein	NA	NA	NA	NA
WP_078692462.1\|1186488_1187151_-	glycoside hydrolase family protein	A0A141GEY9	Brucella_phage	2.6e-47	63.6
WP_035006607.1\|1187252_1187516_-	hypothetical protein	NA	NA	NA	NA
WP_035006606.1\|1188032_1189022_-\|tail	tail fiber protein	D5LGZ0	Escherichia_phage	4.8e-21	38.1
WP_078673976.1\|1189027_1190143_-\|tail	tail fiber domain-containing protein	NA	NA	NA	NA
WP_035006802.1\|1190048_1190624_-	hypothetical protein	NA	NA	NA	NA
WP_035006604.1\|1191020_1192484_-	hypothetical protein	D6PEY0	uncultured_phage	4.1e-45	27.2
WP_078674115.1\|1192484_1193138_-	hypothetical protein	NA	NA	NA	NA
WP_035006602.1\|1193269_1194400_-\|capsid	N4-gp56 family major capsid protein	M4M9G4	Vibrio_phage	3.1e-16	24.6
WP_035006601.1\|1194526_1195396_-	hypothetical protein	NA	NA	NA	NA
WP_153574814.1\|1195941_1197762_-\|portal	phage portal protein	A0A248SKZ2	Klebsiella_phage	5.0e-32	23.2
WP_035006599.1\|1197761_1199090_-\|terminase	terminase	A0A088F6U9	Sulfitobacter_phage	9.6e-142	56.7
WP_035006598.1\|1199768_1200086_-	hypothetical protein	NA	NA	NA	NA
WP_078692463.1\|1200625_1203226_-	ATP-dependent chaperone ClpB	A0A2I7SAX5	Vibrio_phage	2.6e-119	34.8
WP_153574815.1\|1203532_1203703_-	hypothetical protein	NA	NA	NA	NA
WP_078674116.1\|1204012_1204198_-	DNA gyrase inhibitor YacG	NA	NA	NA	NA
WP_078692465.1\|1204307_1204958_-	septum formation protein Maf	NA	NA	NA	NA
WP_013545481.1\|1205164_1205383_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_035006593.1\|1205865_1206375_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	8.2e-17	38.1
WP_078692466.1\|1206467_1207583_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_004863016.1\|1207982_1208108_+	50S ribosomal protein L36	NA	NA	NA	NA
WP_153574819.1\|1208203_1208965_+	hypothetical protein	NA	NA	NA	NA
WP_078692467.1\|1209259_1209868_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_051668866.1\|1209886_1210750_+	YmdB family metallophosphoesterase	NA	NA	NA	NA
WP_078692468.1\|1211602_1212895_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_078673983.1\|1213701_1214319_-	exonuclease	Q9MC71	Pseudomonas_phage	2.4e-34	45.2
WP_035006588.1\|1214534_1214726_-	hypothetical protein	NA	NA	NA	NA
WP_078673984.1\|1214736_1215126_-	hypothetical protein	NA	NA	NA	NA
WP_035006585.1\|1215430_1215751_-	helix-turn-helix transcriptional regulator	A0A2L0V128	Agrobacterium_phage	1.3e-20	52.6
WP_078692469.1\|1216209_1217205_+	YdaU family protein	A0A076GD06	Sinorhizobium_phage	1.7e-18	39.6
WP_078673988.1\|1219386_1219992_+	hypothetical protein	NA	NA	NA	NA
WP_078673989.1\|1220965_1221574_+	DedA family protein	NA	NA	NA	NA
WP_035006580.1\|1221577_1222141_+	disulfide bond formation protein B	NA	NA	NA	NA
WP_035006578.1\|1222867_1223665_+	membrane protein	NA	NA	NA	NA
WP_078692470.1\|1224032_1224584_+	dUTP diphosphatase	K4JSC8	Caulobacter_phage	2.5e-35	51.6
WP_078688886.1\|1224913_1225390_-	biopolymer transporter ExbD	NA	NA	NA	NA
WP_035006575.1\|1225370_1226195_-	biopolymer transporter ExbB	NA	NA	NA	NA
WP_078692471.1\|1226655_1226976_+	DUF883 family protein	NA	NA	NA	NA
WP_035006573.1\|1226979_1227417_+\|holin	phage holin family protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage