CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP016791	Bacillus flexus strain KLBMP 4941 plasmid unnamed1, complete sequence	1 crisprs	RT	1
NZ_CP016790	Bacillus flexus strain KLBMP 4941 chromosome, complete genome	3 crisprs	cas3,DEDDh,RT,csa3,WYL,DinG	7
NZ_CP016792	Bacillus flexus strain KLBMP 4941 plasmid unnamed2, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016791_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016791_1

24412-24561

Orphan

Consensus_repeat	Method
TTCACTCAGTTCACAGTCATTCAC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP016791_1

>merge|NZ_CP016791|1|24412-24561|CRISPRCasFinder
TTCACTCAGTTCACAGTCATTCACATATGATTTTTATAAGGGTTCATTCAATTCACGGTCAATCACTCACCTTGTTTGCTTATGTTCACTCAGTTCACAGTCGTTCACCTGTTGGATTCGCGGTTATTCACCCGGTTCACAGTCATCTAT

>NZ_CP016791|1|1|24412-24561|CRISPRCasFinder
TTCACTCAGTTCACAGTCATTCAC	ATATGATTTTTATAAGGG
TTCATTCAATTCACGGTCAATCAC	TCACCTTGTTTGCTTATG
TTCACTCAGTTCACAGTCGTTCAC	CTGTTGGATTCGCGGTTA
TTCACCCGGTTCACAGTCATCTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016791.1\|WP_078990653.1\|26187_27576_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP016791.1\|WP_153301242.1\|19690_20473_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016791.1\|WP_167556191.1\|31054_32098_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016791.1\|WP_078990598.1\|30330_30579_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016791.1\|WP_078990584.1\|3514_3697_+\|aspartyl-phosphate-phosphatase-Spo0E-family-protein	unknown	unknown	gnl\|CDD\|378175
NZ_CP016791.1\|WP_078990595.1\|27563_28151_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP016791.1\|WP_078990599.1\|30600_30906_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016791.1\|WP_078990593.1\|23809_24376_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016791.1\|WP_078990654.1\|28859_29075_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376540
NZ_CP016791.1\|WP_078990596.1\|28316_28712_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP016791.1\|WP_078990592.1\|21984_23286_-\|replication-protein	unknown	unknown	gnl\|CDD\|368871
NZ_CP016791.1\|WP_078990591.1\|21087_21876_-\|plasmid-stabilization-protein	unknown	unknown	gnl\|CDD\|319257
NZ_CP016791.1\|WP_078990590.1\|20657_21005_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016791.1\|WP_078990588.1\|18952_19660_+\|IS6-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP016791.1\|WP_078990585.1\|16656_16872_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP016791.1\|WP_078990587.1\|17572_18571_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016791.1\|WP_078990586.1\|17238_17586_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP016791.1\|WP_075422189.1\|29106_29355_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016791.1\|WP_078990597.1\|29837_30302_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016791.1\|WP_078990594.1\|25193_26174_+\|alpha/beta-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223489

Protein	Function_ID	Function_description	E-value
NZ_CP016791.1\|WP_078990653.1\|26187_27576_+\|ATP-binding-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	8.09803e-30
NZ_CP016791.1\|WP_078990592.1\|21984_23286_-\|replication-protein	gnl\|CDD\|368871	pfam06384, ICAT, Beta-catenin-interacting protein ICAT. This family consists of several eukaryotic beta-catenin-interacting (ICAT) proteins. Beta-catenin is a multifunctional protein involved in both cell adhesion and transcriptional activation. Transcription mediated by the beta-catenin/Tcf complex is involved in embryological development and is upregulated in various cancers. ICAT selectively inhibits beta-catenin/Tcf binding in vivo, without disrupting beta-catenin/cadherin interactions.	4.06553e-05
NZ_CP016791.1\|WP_078990591.1\|21087_21876_-\|plasmid-stabilization-protein	gnl\|CDD\|319257	cd16400, ParB_Srx_like_nuclease, ParB/Srx_like nuclease and putative transcriptional regulators related to SbnI. This family contains a Pyrococcus Furiosus enzyme reported to have DNA nuclease activity and resembles the N-terminal domain of ParB proteins of the parABS bacterial chromosome partitioning system. This sub-family also includes siderophore staphylobactin biosynthesis protein SbnI. 60% of the P. furiosus nuclease activity was retained at 90 degree C, suggesting a physiological role in the organism, which can grow in temperatures as high as 100 degrees Celsius. The protein has endo- and exo-nuclease activity vs. single- and double-stranded DNA, and nuclease activity was lost in methylated proteins prepared for structure solution. This family has a fairly well-conserved DGHHR motif that corresponds to the same structural position as the phosphorylation site (a portion of the ATP-Mg-binding site) of sulfiredoxin and the arginine-rich ParB BoxII of ParB.	6.43654e-06
NZ_CP016791.1\|WP_078990584.1\|3514_3697_+\|aspartyl-phosphate-phosphatase-Spo0E-family-protein	gnl\|CDD\|378175	pfam09388, SpoOE-like, Spo0E like sporulation regulatory protein. Spore formation is an extreme response to starvation and can also be a component of disease transmission. Sporulation is controlled by an expanded two-component system where starvation signals result in sensor kinase activation and phosphorylation of the master sporulation response regulator Spo0A. Phosphatases such as Spo0E dephosphorylate Spo0A thereby inhibiting sporulation. This is a family of Spo0E-like phosphatases. The structure of a Bacillus anthracis member of this family has revealed an anti-parallel alpha-helical structure.	6.21743e-06
NZ_CP016791.1\|WP_078990588.1\|18952_19660_+\|IS6-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.2953e-73
NZ_CP016791.1\|WP_078990585.1\|16656_16872_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.58567e-09
NZ_CP016791.1\|WP_078990596.1\|28316_28712_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.10329e-12
NZ_CP016791.1\|WP_078990586.1\|17238_17586_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	1.1238e-12
NZ_CP016791.1\|WP_078990654.1\|28859_29075_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	8.85912e-15
NZ_CP016791.1\|WP_078990595.1\|27563_28151_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.43217e-25
NZ_CP016791.1\|WP_078990594.1\|25193_26174_+\|alpha/beta-hydrolase-family-protein	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	2.37943e-06

>NZ_CP016791.1|WP_078990593.1|23809_24376_-|hypothetical-protein
MNTSESTNFIGVPEASEYTNIPPETLKRYLINHEQFLNFKKEGRRYKISIESLDLLKKIRELYSEGLLKDDVNDNLASDGLPITITVKNQEEKGSISINDELSEIKKMLQQQEQQMTQQMQFNQKLVEELQKVSQTNQELKQMINRKDTELIGELRKGLSESKRMIEEASASAELEKKKTWWEKLMGK
>NZ_CP016791.1|WP_078990592.1|21984_23286_-|replication-protein
MTKILTCYLKDVDTFNGRFKWLWTNKSTLRKKKEEFLDILRTHFKQQQSAIHKEFPKKRMEMLDHVIYNLVATGIQAIRSETLMKKFNVSKSTVSRFVRSLKATPFVLVARYIKEDATGTHPDSYVFILKSHKNFHHICDEIFFAHDTTGIQTLQQEEMTTPVTRPVTSPESAENVDIASLEADKSSDAFINLDLPVNHINNHLISVSQSFSYIKGVPKKVNQVYAGKYGHQLQDFYARIQNAAKAVKRDTEIEIKKEQVHEIAYTSIVGLDKYVHEANQQGNPLSLRDMCRLIYQIAKNQFYELTKPKEQDYSSVYANQQEVIHNESETTMLAKPKHIIRKELVPDWLKAEQQQDQPKQEKDVTVEQQLEMIQLKQDLGQELTPEEENLLEEHSSTYSLLEIAQVKQDLGQVLTLEEQECLRHHNQLKDTAS
>NZ_CP016791.1|WP_078990591.1|21087_21876_-|plasmid-stabilization-protein
MPHKITLTGSATGPLREYDRYVAFDMREKGSPSAPKGLKKSTFISYTVFVAKKAFNKTGLTKKSIMHEKILIQGEPTLDIPIDECPGEVGVICFQITVLPNKNDKEKNQPEAKKESKQEASAPSEVQKNTESTKQEETQAPVSQPVAKEEKKETKAVQPEAKQEQAEEKKAERKPKTLPNQPKGTQDLVSFDDIIVPEAFLNTRPNPEKTQKVIDFVKRTGRLDEPLTIEKGSNVLKDGYRRYVVAKTVKMDKVPVVYEYQK
>NZ_CP016791.1|WP_078990590.1|20657_21005_-|hypothetical-protein
MKTSIPCPGCQKPITIEHFEDFSSPFTMKCPHCRAKLKETKMTPWLLLLAVIIVPLLIYLGITIKSFLSGHFPVVEKVPTMIVFIAFCYLVYALYEAYNAVIIFNKGNLQLKKTQ
>NZ_CP016791.1|WP_153301242.1|19690_20473_-|hypothetical-protein
MAQKIGCSDDVIHRIEMKSGYVVKVHQTNCGATTDFGYKLTLTHHGKDEKEILSYGMLEGDSRIETDVHNNQINVTYSPATIVYSKGSKYKGVPIHFERKGGNVSVPESFENQRKSFDLEMADLFANSLIVYRNEEIPAGQVHYAVSEKGITSKAWNSNWLVIGAIEYTLPVFIHVNEKNSPVYIGQKEKNSSTWKEVKVASTYRDFQKALKLVDDPSGNRSFPEDVKTNPFPQKEIKHNLNAINKGNIDRFWCKHLEEI
>NZ_CP016791.1|WP_078990588.1|18952_19660_+|IS6-family-transposase
MEKQNLFKWKHYQPDIILLTVRWYLRYSLSFRDLVEMMEERGLSMAHTTIMRWVHQYGPELDERVRRHLKTTNDSWRVDETYVKVKGQWMYLYRAVDSEGNTIDFYLSESRDKQAAKRFFKKALAASHICKPRVITVDKNPAYPVAIQELKEEKCMPEGIQIRQVKYLNNIVEQDHRFIKKRIRPMLGLKSFRTAKRIIAGIEAMHMIKKGQTLQGEKSVQSQVNLVHQLFGFPA
>NZ_CP016791.1|WP_078990587.1|17572_18571_+|hypothetical-protein
MNLIEVYIHEVTRRLPEKNREDIALELHSTIEDMLPDDYSKEDLKECLKKMGDPAILASGYRDHPMHLIGPLYYNAYVTLLKMILPIAAVISLISMIAEYFIGYHGEEAVINVVLDILGFGIWRIIEVGIQVFFWLTLVFAILERTDKGKGEQPLTANLQKWTPDDLKNISYIPKKKSISKFEVFGSLMWTAIWATLYFYANHLVGVYRDSGNGLEFVTPALNQEVLMGYWPFIVMMIAFEIVLSLYKLIKGKWTKRMAISNTVLQLIGTIVFIVILINSNLLNQDFIMYMADLFTVTVKQFKLWIVGGGICCFIVSAAISVFDGFRKASIR
>NZ_CP016791.1|WP_078990586.1|17238_17586_+|PadR-family-transcriptional-regulator
MSTLLNSLTTELRRGTLTLAVLSQLRTPQYGYSLVQLLEKSRIVIDQSTLYPLLRRLEKQELVTSSWDKSESRPRKYYVLSEYGLEVFLHLKKEWIDNSKELYRLLKEEEENEPN
>NZ_CP016791.1|WP_078990585.1|16656_16872_+|GNAT-family-N-acetyltransferase
MKFNRVQLSADVDNIRSQKAILKLGAKQEGVFRNNYIDQNGNKRDDVYFSIISDEWINVKEKNFVDFNFYR
>NZ_CP016791.1|WP_078990584.1|3514_3697_+|aspartyl-phosphate-phosphatase-Spo0E-family-protein
MQKYRYNSTLRKALLVDIEEARERMIKVGLEEGFTSHNTILISQLVDQLLNELEEITSSD
>NZ_CP016791.1|WP_078990594.1|25193_26174_+|alpha/beta-hydrolase-family-protein
MLLSKLIDHYALHDLHKDRSQEDQYYIESAHIPINIDRETFFEVPASLSDIGLDITSTDKRYSIGEFGFESLIPSGDVSNDYVRGETFLNEDESKPNVIFVHGWRMKGFDRVKKIFHNSIMKNLGWDMYYYTLPYHLERQPEKSLYSGEFMVSANINRTVESTRQAIVDLRALIRWIKNNKQGPVIIIGVSLGGFISNLVATLESEIDALVSIFYSNRLSYSIWNTIPGKYIRQDLESHGVNYNDLVKYWELTEPNQDIPKMHKDNILLISAKHDQYVHIQEADLLWESWGKPTRYVYNCGHAGIVLKRKKIAKDTISFLQNKLKR
>NZ_CP016791.1|WP_078990653.1|26187_27576_+|ATP-binding-protein
MFIMVALLWLMSSILFFRNPQNEKIRWASVIGFCGGFGGIGALLGKGIDRPEWILHLDGIFTSIGHYFTPYGMLIFGIVYSDVIGNVRKRNILKLLLLIPIFIMYSMFQVYPEFRVDFRILAIWVAPYVIAANILLIYSAWREDRPIIKRRKILTCVFVVPMFTFALTTNIILEALGIVGVWRYNPWIIVIQFLVFVYFGVKYGILGVRIRFEKEMRDSTMKAARSGTALFNHTIKNEIAKIDLLVNQIKEQIPPEDKSAENLGLVLNSTNHALELSRRIQSKLDVINLKESEFSLTESIDSAINLLKPYLNMNPDITIIKQYEVDAIVFGDTEQLQETYLNIIKNASEAMNGQGVILIKVYKTRKKIHIDFIDEGKGIGKGELTRVLDPFYSTKHNQTNFGLGLTYCYNVLKKHGGDILVKSKVEKGTTFTLTLPSKRIIEFRVNEQSNSKLVGENSLWTK
>NZ_CP016791.1|WP_078990595.1|27563_28151_+|response-regulator-transcription-factor
MDKIKLMIVEDDPVWMQCISDYIEKENDIIVVKQAYNKEEALQVDYNNIDVVLLDLTLLKDEGDEENLSGLEVARHLYKKGLKKTIMLTSWDEKDIILECFDTGVVNYLTKTSYRDIPDAIREAFRGKVSLHADVANVLVGELRKERKVKILTPTEREVYTLREQGLNKSQIADKLYKSVEIIKRQLRIIKSKMQ
>NZ_CP016791.1|WP_078990596.1|28316_28712_-|helix-turn-helix-domain-containing-protein
MDIKKYMGVKIKEYRKAMKLTTMELGSLSGTSQSTISEIERGTRSIQVESLAKICNALGVTLNDVLPISASQEKTDASYTPEISQLTNIISSLSSDEVRLLTDILLKVNRLPQSDRESLKSLLNSLMNNKL
>NZ_CP016791.1|WP_078990654.1|28859_29075_+|helix-turn-helix-transcriptional-regulator
MLEIKTIKEKRLEKKWSQTYLAQLSGVPQPTISQIENGTRQYPTFENMKKIAEALDLRLEDIFLPSHKDMN
>NZ_CP016791.1|WP_075422189.1|29106_29355_+|hypothetical-protein
MEAEKRLAFYDISDARAKSAKTFDGKLYTLKGGVAVEKGTGDIKRVADIYYEVRSVMDQAHTIVAKRRKKDEELKEVLQKTC
>NZ_CP016791.1|WP_078990597.1|29837_30302_+|hypothetical-protein
MKNKKWLLSAVAGIVVALVIGTAFVSSYNSSEVKGNGELEELSPLQMKKFMKEDGTGFIMFSFNKENRDLYMNDVKRAMQQENVEGKELDGHHPKFDGSKSQNDYGLDQHADTLAVYKDGELKQQIELDEYDPSKLETELSHFIETSKEMYFEE
>NZ_CP016791.1|WP_078990598.1|30330_30579_+|hypothetical-protein
MTISQKELKKSKDLVEKLLKVNGNKYNDWLHQQHQQFIEENQDLILQALSAFTGEEEEEKKSEPKAAEPVPVRPQSIPVTQN
>NZ_CP016791.1|WP_078990599.1|30600_30906_+|hypothetical-protein
MLDLLNSVDVTQLTSHLTLGAADGMGGLMESGKSIIKWMQRIAIVAAALAFCVGGYHLILGGERGRHKCISWFVGGAVGLVIVMGAYALAEGVNTNIRFGG
>NZ_CP016791.1|WP_167556191.1|31054_32098_+|hypothetical-protein
MTETLETHYQRTKKKAHADFFILDEEDQEVYAGTLSIGFSHSRHVVDHIKKKLSSLKMDDIQEARKRSFLEQLEKEVPDHLKTTDGSFSLEEEKENDVQTTQTPVLSTRNRRLIYSGGILSLLILSATCFSTVATSQDRAETIQDLQKQVKLEQKITGTYERALLGDSEGALKRLSSIDEQSLTKEQKNVYMSLLVDQKKYKEAVKLQGDHPEVVESMISKKGDVNELKEFQQAFPSPNGAFDLAYHEQRWEDMMSQSGVEMTDKRYEMKAYGYLKLDKVKEAKKEAAHIQSQDVKQKIETYEKTKKEIEETKKQVEEENKKDKKDENKIKSLTDQQKKQEEALKNL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18952 : 74665

Streptococcus_phage(33.33%)

transposase,integrase

attL 18861:18901|attR 79375:79415

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
18861:18901	attL	NA	NA	NA	NA
WP_078990588.1\|18952_19660_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.9e-43	40.7
WP_153301242.1\|19690_20473_-	hypothetical protein	NA	NA	NA	NA
WP_078990590.1\|20657_21005_-	hypothetical protein	NA	NA	NA	NA
WP_078990591.1\|21087_21876_-	plasmid stabilization protein	NA	NA	NA	NA
WP_078990592.1\|21984_23286_-	replication protein	NA	NA	NA	NA
WP_078990593.1\|23809_24376_-	hypothetical protein	NA	NA	NA	NA
WP_078990594.1\|25193_26174_+	alpha/beta hydrolase family protein	NA	NA	NA	NA
WP_078990653.1\|26187_27576_+	ATP-binding protein	A0A1B1IUJ1	uncultured_Mediterranean_phage	7.2e-07	25.2
WP_078990595.1\|27563_28151_+	response regulator transcription factor	NA	NA	NA	NA
WP_078990596.1\|28316_28712_-	helix-turn-helix domain-containing protein	S5MTZ5	Brevibacillus_phage	1.6e-07	39.6
WP_078990654.1\|28859_29075_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_075422189.1\|29106_29355_+	hypothetical protein	NA	NA	NA	NA
WP_078990597.1\|29837_30302_+	hypothetical protein	NA	NA	NA	NA
WP_078990598.1\|30330_30579_+	hypothetical protein	NA	NA	NA	NA
WP_078990599.1\|30600_30906_+	hypothetical protein	NA	NA	NA	NA
WP_167556191.1\|31054_32098_+	hypothetical protein	NA	NA	NA	NA
WP_078990601.1\|32113_32623_+	hypothetical protein	NA	NA	NA	NA
WP_078990602.1\|32612_35195_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_029325363.1\|35214_35421_+	hypothetical protein	NA	NA	NA	NA
WP_078990603.1\|35444_37763_+	hypothetical protein	NA	NA	NA	NA
WP_078990604.1\|37801_38092_+	hypothetical protein	NA	NA	NA	NA
WP_078990605.1\|38107_38821_+	hypothetical protein	NA	NA	NA	NA
WP_167556195.1\|38841_40773_+	type IV secretion system protein VirB4	NA	NA	NA	NA
WP_078990607.1\|40776_41889_+	transglycosylase SLT domain-containing protein	A0A0A0RVE6	Bacillus_phage	5.6e-34	56.9
WP_078990608.1\|41903_42485_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_078990609.1\|42495_43383_+	hypothetical protein	NA	NA	NA	NA
WP_078990610.1\|43896_44250_+	hypothetical protein	NA	NA	NA	NA
WP_078990611.1\|44246_45446_+	hypothetical protein	NA	NA	NA	NA
WP_078990612.1\|45445_45883_+	hypothetical protein	NA	NA	NA	NA
WP_078990613.1\|45933_46209_+	hypothetical protein	NA	NA	NA	NA
WP_078990614.1\|46201_47554_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_153301244.1\|47610_48645_+	hypothetical protein	NA	NA	NA	NA
WP_078990655.1\|48759_49713_+	DUF3991 domain-containing protein	NA	NA	NA	NA
WP_078990616.1\|49705_49885_+	hypothetical protein	NA	NA	NA	NA
WP_167556192.1\|50481_52296_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	7.7e-25	28.7
WP_078990618.1\|53531_54092_+	L,D-transpeptidase	NA	NA	NA	NA
WP_153301245.1\|54389_54533_-	hypothetical protein	NA	NA	NA	NA
WP_078990620.1\|54580_55192_-	AAA family ATPase	V5TGE8	Bottlenose_dolphin_coronavirus	1.2e-09	30.1
WP_078990656.1\|55321_55744_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_061786716.1\|56226_56631_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_025909644.1\|56620_57028_-	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_078990621.1\|57374_58556_+	hypothetical protein	NA	NA	NA	NA
WP_078990622.1\|58573_58948_+	hypothetical protein	NA	NA	NA	NA
WP_078990623.1\|60297_60792_-	recombinase family protein	M9Q1K0	Clostridium_phage	1.6e-17	35.0
WP_078990624.1\|60898_61606_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.9e-43	42.7
WP_167556193.1\|62984_64283_+	hypothetical protein	NA	NA	NA	NA
WP_078990626.1\|64304_64487_+	hypothetical protein	NA	NA	NA	NA
WP_078990627.1\|64589_65591_+	formamidase	NA	NA	NA	NA
WP_078990628.1\|66686_66854_+\|transposase	transposase	NA	NA	NA	NA
WP_167556194.1\|66915_67086_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_078990588.1\|67220_67928_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.9e-43	40.7
WP_078990630.1\|67973_70808_+	RHS repeat protein	NA	NA	NA	NA
WP_078990632.1\|71419_71980_-	hypothetical protein	NA	NA	NA	NA
WP_078990633.1\|72062_73037_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_078990634.1\|73516_74665_+\|integrase	site-specific integrase	NA	NA	NA	NA
79375:79415	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP016790

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016790_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016790_1

3452524-3452732

Orphan

Consensus_repeat	Method
TGTAAATGAGGTGTTTGTCAAAGA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP016790_1

>merge|NZ_CP016790|1|3452524-3452732|CRISPRCasFinder
TGTAAATGAGGTGTTTGTCAAAGACCACGAACGACTTCGTTCAATTTATTTATCCATTCTACAAATTGCTTAAATGAGGTGTTTGTCAAAGAGAAGAAACGTTTTATTCTACGTTAATGCTTGTCATTAAAATGTCGAATGAGGTGTTTGTCGAAGACAATTTACATGAATTAGGCACATTATTACGTAAATGAGGTGTTCCTTAAACG

>NZ_CP016790|1|1|3452524-3452732|CRISPRCasFinder
TGTAAATGAGGTGTTTGTCAAAGA	CCACGAACGACTTCGTTCAATTTATTTATCCATTCTACAAATTG
CTTAAATGAGGTGTTTGTCAAAGA	GAAGAAACGTTTTATTCTACGTTAATGCTTGTCATTAAAAT
GTCGAATGAGGTGTTTGTCGAAGA	CAATTTACATGAATTAGGCACATTATTA
CGTAAATGAGGTGTTCCTTAAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016790.1\|WP_061785144.1\|3444526_3444760_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376540
NZ_CP016790.1\|WP_076513324.1\|3459598_3459688_-\|YjcZ-family-sporulation-protein	unknown	unknown	unknown
NZ_CP016790.1\|WP_025907787.1\|3459380_3459560_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016790.1\|WP_061786590.1\|3450197_3451406_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|377581
NZ_CP016790.1\|WP_025907785.1\|3458122_3458722_+\|HTH-type-transcriptional-regulator-Hpr	unknown	unknown	gnl\|CDD\|237501
NZ_CP016790.1\|WP_167556174.1\|3444298_3444448_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016790.1\|WP_061785143.1\|3444955_3445612_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224885
NZ_CP016790.1\|WP_025907779.1\|3451398_3452139_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP016790.1\|WP_061785142.1\|3445623_3447048_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_CP016790.1\|WP_025907770.1\|3443817_3444018_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016790.1\|WP_035319920.1\|3455715_3456810_+\|3-phosphoserine/phosphohydroxythreonine-transaminase	unknown	unknown	gnl\|CDD\|235428
NZ_CP016790.1\|WP_078990254.1\|3453628_3454081_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225064
NZ_CP016790.1\|WP_076513320.1\|3456926_3457451_+\|tryptophan-transporter	unknown	unknown	gnl\|CDD\|293704
NZ_CP016790.1\|WP_153301202.1\|3447031_3447208_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016790.1\|WP_062686528.1\|3457617_3457992_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227313
NZ_CP016790.1\|WP_061786592.1\|3447295_3447961_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_CP016790.1\|WP_025907786.1\|3458725_3459070_-\|DUF1878-family-protein	unknown	unknown	gnl\|CDD\|370213
NZ_CP016790.1\|WP_025907780.1\|3452889_3453321_+\|HIT-family-protein	unknown	unknown	gnl\|CDD\|223611
NZ_CP016790.1\|WP_078989485.1\|3454313_3455438_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP016790.1\|WP_078990253.1\|3448152_3449355_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349941

Protein	Function_ID	Function_description	E-value
NZ_CP016790.1\|WP_061785144.1\|3444526_3444760_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	6.77678e-15
NZ_CP016790.1\|WP_061786590.1\|3450197_3451406_-\|ABC-transporter-permease	gnl\|CDD\|377581	pfam05975, EcsB, Bacterial ABC transporter protein EcsB. This family consists of several bacterial ABC transporter proteins which are homologous to the EcsB protein of Bacillus subtilis. EcsB is thought to encode a hydrophobic protein with six membrane-spanning helices in a pattern found in other hydrophobic components of ABC transporters.	3.61487e-112
NZ_CP016790.1\|WP_025907785.1\|3458122_3458722_+\|HTH-type-transcriptional-regulator-Hpr	gnl\|CDD\|237501	PRK13777, PRK13777, HTH-type transcriptional regulator Hpr.	4.06367e-121
NZ_CP016790.1\|WP_061785143.1\|3444955_3445612_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224885	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].	1.44597e-18
NZ_CP016790.1\|WP_025907779.1\|3451398_3452139_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.563e-80
NZ_CP016790.1\|WP_061785142.1\|3445623_3447048_+\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	2.20054e-52
NZ_CP016790.1\|WP_035319920.1\|3455715_3456810_+\|3-phosphoserine/phosphohydroxythreonine-transaminase	gnl\|CDD\|235428	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase.	0
NZ_CP016790.1\|WP_078990254.1\|3453628_3454081_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	1.32487e-56
NZ_CP016790.1\|WP_076513320.1\|3456926_3457451_+\|tryptophan-transporter	gnl\|CDD\|293704	pfam17099, TrpP, Tryptophan transporter TrpP. TrpP is a bacterial transmembrane protein that is probably involved in tryptophan uptake. Its expression is regulated by tryptophan-activated RNA-binding regulatory protein (TRAP).	2.65505e-40
NZ_CP016790.1\|WP_062686528.1\|3457617_3457992_+\|hypothetical-protein	gnl\|CDD\|227313	COG4980, GvpP, Gas vesicle protein [General function prediction only].	9.56839e-12
NZ_CP016790.1\|WP_061786592.1\|3447295_3447961_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	2.16536e-32
NZ_CP016790.1\|WP_025907786.1\|3458725_3459070_-\|DUF1878-family-protein	gnl\|CDD\|370213	pfam08963, DUF1878, Protein of unknown function (DUF1878). This domain is found in a set of hypothetical bacterial proteins.	1.06405e-29
NZ_CP016790.1\|WP_025907780.1\|3452889_3453321_+\|HIT-family-protein	gnl\|CDD\|223611	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only].	3.69974e-56
NZ_CP016790.1\|WP_078989485.1\|3454313_3455438_+\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	8.31652e-21
NZ_CP016790.1\|WP_078990253.1\|3448152_3449355_+\|amidohydrolase	gnl\|CDD\|349941	cd08021, M20_Acy1_YhaA-like, M20 Peptidase aminoacylase 1 subfamily, includes Bacillus subtilis YhaA and Staphylococcus aureus amidohydrolase, SACOL0085. Peptidase M20 family, uncharacterized subfamily of bacterial proteins predicted as putative amidohydrolases or hippurate hydrolases. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine). This family includes Staphylococcus aureus amidohydrolase, SACOL0085, which contains two manganese ions in the active site, and forms a homotetramer with variations in interdomain orientation which possibly plays a role in the regulation of catalytic activity.	0

>NZ_CP016790.1|WP_025907779.1|3451398_3452139_-|ABC-transporter-ATP-binding-protein
MSLLQIQHLTGGYTKTPVLKDVSFEVNAGELVGLIGLNGAGKSTTIKHIIGLMEPKKGSIAIHNKTFQQDSTGYRTQFTFIPETPILYDELTLKEHLDMTAMAYGLDSKTYEARLKPLLKEFRMDKKLKWFPAHFSKGMKQKVMIMCAFLVQPSLYIIDEPFLGLDPLGIQSLLDLMTDMKKQGAGILMSTHILATAERYCDKFVILHNGQVRAQGTLADLRAQFNKPNATLDEIYIELTKEEDYE
>NZ_CP016790.1|WP_061786590.1|3450197_3451406_-|ABC-transporter-permease
MSSIEGLWQQRFQQHLKDTRRYMKYIFNDHLKLVLVFAIGAAAYYYQQWLDTLTPAFPSAFLIAVIMSLVLTSGSIRTFLKRPDLVFMLALESKLQLYFKKSFFYTFSTYIYVLLILTAAVAPLHVKVTDQTYSTIFTHLILLLILKAINLKMTWWSVYFEEKYARWIDYLVRFLLNGVFVYFLFVGSYAFFPAVTGAIIIGLALYYRSLVKAKPLKWETLIELEERRVAMFYRLANLFTDVPQLKEQVKRRAYLDTILKSIPFQQQATHRYLYTRTFLRAGDYLGLLVRLTVISGLILIATPFAYGNIVIVLLTLYITGFQIMPLWKHHKQVLWLSLYPLQEQTRRAAFLSIIRNVLFLQAACLSIVVAASNLLVGLLAFVAGGLFVQFFVTAYIKKKAIA
>NZ_CP016790.1|WP_078990253.1|3448152_3449355_+|amidohydrolase
MISELHSLLEKSYDEMVQIRRYLHQYPEPSFKEFQTATYIRGFYDKIGVPYRANVGGNGIVATIKGEKPGPTVALRADFDALAIQDEKDVPYKSTVPGVMHACGHDGHTATLLVLAKSIQQLKDHLEGTIVFIHQHAEEYAPGGAKPMIEDGCLDGVDAIFGTHLWAVTPTGVIQHRNGPFMAAADRFEITIKGAGGHGAQPHKTKDAIVIASQLVVNLQQIISRRVNPVESAVITVGSFVAENAFNVIADSAKLVGTVRTFSEDVRNDMEREIERIIQGTCLAADASYDYSFKRGYPAVVNHSEENAFLAKVAETIPEVEKVEETEPQMGGEDFAYYLQHIKGTFFFTGAQPEGVDTPYPHHHPKFDFNEKAMLIASKTLGTAAIEYLSKEQKAESITS
>NZ_CP016790.1|WP_061786592.1|3447295_3447961_-|phosphatase-PAP2-family-protein
MRKWRMKYRFILLLLLALMGMFIGVVMTINGPVHGIDAFFLTIATNIHNHELVIRILEVTSFFASKPMIIILSLLLVGVLGFNKRDTVGAVTVLAFVLSGYLLNNAVKAWIERLRPTLGVEGYSFPSGHAMLGLMLYGFLLFFIIFYVKNETVRKASIIVFSLLILFIGVSRFLLAEHYMTDVLGGYLLGGFWLTVGLLFYTLVKAYLTPTAPMNSKQYMG
>NZ_CP016790.1|WP_153301202.1|3447031_3447208_+|hypothetical-protein
MYQRNDYMSFMGGGTLIPWALIPAAAICGVSPFELARRNLKPVAIGLVVTTVVAMFLI
>NZ_CP016790.1|WP_061785142.1|3445623_3447048_+|recombinase-family-protein
MKCIVYVRVSTDEQAKHGFSIAAQIEKLEAYCISQGWELVDKYIDEGYSAKDLQRPAFEKMMDTLKQGNIDVLLVYRLDRLTRSVMDLYKILKILDDNNCMFKSATEVYDTTNAMGRLFITLVAAIAQWERENLGERVRLGMEKKTKLGMWKGGMAPYGYKIVEKKLVVNDKEKAVVQEIFKQTTTFGFYTLAKHLTNKGFSTRKGGEWHVDSVRDIANNPVYAGYLTFNQNSKDYKKPPREQTLYEGSHEPIISKEEFWALQDLLDKRRNGGGKKHTSNYYFSTLLKCARCGHSLSGHKSAGKKTYRCSGKKAGKNCTSHIILEDNLTKTIFSMFDKLVGNIYNSTDSSNYSDEKINELTNELKNLEKLLDKQKKMYENDIIDIDELIKKSNQLREREKEINKELKSINQSSKTANEETKYIISNIDTVWEYSTDHERKQLMNSIFTQIVIDTKEEYKRGTGNPREIIIVSAK
>NZ_CP016790.1|WP_061785143.1|3444955_3445612_+|helix-turn-helix-domain-containing-protein
MSIGKNIKKLRELHNLSQKELAEIAGVSDKAVSTWENNIKDPRMGAIQKIADHFGILKSDIIEDKIEILSKHPHTPKVIEGNSVKMPLLGSIAAGLPLDMAPIQEWVNVPVEVAERYPNAFLVTVNGDSMNKLIPPNVLALIDPTQEVRNGDVAAVAVNGYDATLKRFFKFQNGITLEPESFNPKHKTQYYDAKTQEHTPIHIKGKLVWYMPPLDIKF
>NZ_CP016790.1|WP_061785144.1|3444526_3444760_-|helix-turn-helix-transcriptional-regulator
MKFTLKQARLLKGLTQKEVAKKLGVHVQTYSNMERNPDDVTVGEAKLISEILGFSYDFIFFNDNSTLSRIVNDDFNL
>NZ_CP016790.1|WP_167556174.1|3444298_3444448_-|hypothetical-protein
MDLSAFQMTEEKIRKIRPIVEKALSRKYGKEIKIFEMTVGGITVKIHKE
>NZ_CP016790.1|WP_025907770.1|3443817_3444018_-|hypothetical-protein
MQQVENPIVTDVEKDPQIYGIDAAGNEVFVGEEIFQADEEFILAEVVTKEVEEFFKALGIEKVVAK
>NZ_CP016790.1|WP_025907780.1|3452889_3453321_+|HIT-family-protein
MSNLDENCIFCKIIRGEIPCAKVFENEHVLAFLDISQVTKGHTLVIPKVHKKDIHELTPEIARHLFEVVPQIATAIKETYEPVGINILNNNGEKAGQSVFHYHMHIIPRYGEGDGFGAVWKEHTSDYTPEKLQSIAAEISERL
>NZ_CP016790.1|WP_078990254.1|3453628_3454081_-|GNAT-family-N-acetyltransferase
MTWHIKTFDQLTTYELYDILQERTRVFVVEQECAYLEVDGKDQASYHLFKVENAQIIAYIRLMPKGVSYQEASFGRVLVHSDYRKTGMGRELVQKGLAFLKDQMGEEVVKIQAQSHLQHFYESFGFYAISNVYDDDGIPHVDMIKEEIET
>NZ_CP016790.1|WP_078989485.1|3454313_3455438_+|IS4-family-transposase
MDKFTRKTSFEQWFSPIFSTKLEELVESYQLNYYTKKLHIASFLKLFVFAQLNETESLRAVSETLFSDDLQKATHLEAISFSQLGRRLNQVPTEVFQQVFLDLVAQIHEKSHYEQRRETTTPLKIIDSSTLPLNLKNHKWAEFRKTKSGIKLHLRLVYAEKGCSYPDKAVLTNAKEHDRGQLEVLVDDKECMYVFDRGYLDYERFDRMTDDGYVFVSRLRKNAVIRVIEPFKLPEDSLVFSDEMVLIGTPQNRAENAFRLIKVLDSKGNELHLITNRFDLSADEIAELYKSRWAIELFFKWLKQHLNIKKFYAQSEQGVHNQVYIAMIVYCLHVLAQLNTNSSRTYLQISRLLKVAPWKSAHLWLRKIAGKAVP
>NZ_CP016790.1|WP_035319920.1|3455715_3456810_+|3-phosphoserine/phosphohydroxythreonine-transaminase
MISVKRAYNFNAGPSALPLPVLQLAQQELTDFKGTGMSVMELSHRSKEFENVLNHAKETLTELLSIPDTHEILFLQGGASLQFSMIPMNFLGKDQVGAFVLTGAWSEKALKEAKKVGETTVVASTKEENYRSIPTLDRAALPSNTAYLHITSNNTIFGTQWAEYPEFENIDLIADMSSDILCRPIDVSKFSLIYAGAQKNLGPSGVTVVIIKKDLLKRIPANLPTMLDYNTHIKSNSLYNTPPTFGIYMLSLVLDWIKEQGGVTVVAENNKKKAELIYSSIDKSNGFYTPHATNDSRSLMNVTFTLPNEELTAAFLAQSKEQGFVGLAGHRSVGGCRASIYNAVPLEACQALAAFMDEFASVHA
>NZ_CP016790.1|WP_076513320.1|3456926_3457451_+|tryptophan-transporter
MNTKTLVSLSLLVGIGAVLHAIMPPVLFGMKPDMMLTMMFLGILLFPGVKNVLLLGLTTGAISALTTGFPGGQVPNIIDKPITAFIIFGLLLLVRNVTTVKTPVAAALTAVGTLVSGIIFLSAAALIVGLPGGLMALIVGVVLPATVVNTIVMVVVYPIVNSVLKRTSISAKVS
>NZ_CP016790.1|WP_062686528.1|3457617_3457992_+|hypothetical-protein
MKRTTSLFTGIAAGSIAAAAATLLLTPTSGKTLRQRIAQESHQVKETKEDISGKIKHLKTQIQTTAKDGNTIVKNIAKDLSKTLNEFQKDIRPHQQSIQSHLNEIEDSLSHLEKHIQTTKTEGK
>NZ_CP016790.1|WP_025907785.1|3458122_3458722_+|HTH-type-transcriptional-regulator-Hpr
MKKTSDQVYDLKEALLFSQRIAQLSKALWKTVEKDWQQWIKPYDLNINEHHILWISYHLNGASISEIAKFGVMHVSTAFNFSKKLEERGLLEFSKKETDKRNTYIQLTQKGEDILLALMENYKPSENSVFNGALPLRNLYGKFPEFMELMTVIRKIYGEDFMDIFERSFHHIEEEFVDNDGKLEKREKIVTDQKESISN
>NZ_CP016790.1|WP_025907786.1|3458725_3459070_-|DUF1878-family-protein
METLESRVSRLEYYIKLLAGTPEQEAKPFIELVVKEELTRREVEDVLLLCEEIKEVYIEQKAEGLTDFVPLLTQFVGMLNYKLDPQETIESLLNQSSYQDVMTELFNIVQWIRD
>NZ_CP016790.1|WP_025907787.1|3459380_3459560_+|hypothetical-protein
MYIFFIPFALFILFYINTLTNTLCLQKEIPEEKQPKVFRTINILITILLISSYVEVLFT
>NZ_CP016790.1|WP_076513324.1|3459598_3459688_-|YjcZ-family-sporulation-protein
MGKHGYGNGFSLIVVLFILLVIIGYGLAY

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016790_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016790_2

3591178-3591276

Orphan

Consensus_repeat	Method
TTCAGCTTGTGCGTTTTGTTGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016790_2

>merge|NZ_CP016790|2|3591178-3591276|CRISPRCasFinder
TTCAGCTTGTGCGTTTTGTTGCTTCACTTGTTGCACATCTGTTTCGCTAGCAAATTCTGCACCGTATTGGTTGTTTGCAGCTTGTGCGTTTTGTTGCTT

>NZ_CP016790|2|2|3591178-3591276|CRISPRCasFinder
TTCAGCTTGTGCGTTTTGTTGCTT	CACTTGTTGCACATCTGTTTCGCTAGCAAATTCTGCACCGTATTGGTTGTT
TGCAGCTTGTGCGTTTTGTTGCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016790.1\|WP_025909532.1\|3595227_3595386_+\|small,-acid-soluble-spore-protein-K	unknown	unknown	gnl\|CDD\|285399
NZ_CP016790.1\|WP_078990319.1\|3592553_3593648_-\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP016790.1\|WP_078990316.1\|3586765_3587854_+\|aromatic-acid-exporter-family-protein	unknown	unknown	gnl\|CDD\|226614
NZ_CP016790.1\|WP_061786178.1\|3580805_3581210_-\|peroxide-responsive-transcriptional-repressor-PerR	unknown	unknown	gnl\|CDD\|223806
NZ_CP016790.1\|WP_061786169.1\|3593785_3594766_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP016790.1\|WP_078990315.1\|3582520_3583306_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226218
NZ_CP016790.1\|WP_025909531.1\|3595430_3595751_-\|YfhH-family-protein	unknown	unknown	gnl\|CDD\|378063
NZ_CP016790.1\|WP_061786171.1\|3592285_3592510_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016790.1\|WP_061786174.1\|3587881_3589630_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP016790.1\|WP_025909539.1\|3589798_3590332_-\|DUF402-domain-containing-protein	unknown	unknown	gnl\|CDD\|184219
NZ_CP016790.1\|WP_078990320.1\|3595831_3596491_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187643
NZ_CP016790.1\|WP_025909538.1\|3590636_3590897_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372951
NZ_CP016790.1\|WP_025909533.1\|3594821_3595091_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379438
NZ_CP016790.1\|WP_025909549.1\|3580422_3580794_+\|YgzB-family-protein	unknown	unknown	gnl\|CDD\|371346
NZ_CP016790.1\|WP_025909547.1\|3581486_3581957_-\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|224146
NZ_CP016790.1\|WP_061786175.1\|3585252_3586551_+\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|183493
NZ_CP016790.1\|WP_078990321.1\|3596522_3597332_-\|recombination-regulator-RecX	unknown	unknown	gnl\|CDD\|237619
NZ_CP016790.1\|WP_061786177.1\|3582026_3582428_-\|two-pore-domain-potassium-channel-family-protein	unknown	unknown	gnl\|CDD\|369572
NZ_CP016790.1\|WP_078990318.1\|3591387_3592137_-\|enoyl-[acyl-carrier-protein]-reductase-FabL	unknown	unknown	gnl\|CDD\|236145
NZ_CP016790.1\|WP_167556092.1\|3598133_3598319_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP016790.1\|WP_025909532.1\|3595227_3595386_+\|small,-acid-soluble-spore-protein-K	gnl\|CDD\|285399	pfam08176, SspK, Small acid-soluble spore protein K family. This family consists of the small acid-soluble spore proteins (SASP) belonging to the K type (sspK). The sspK are unique to the spores of Bacillus subtilis and are expressed only in the forespore compartment of sporulating cells of this organism. The sspK gene is monocistronic and transcription is primarily by the RNA polymerase with the forespore-specific sigma factor, sigma-G. Mutation deleting sspK results in loss of SspK from the spore but had no discernible effect on sporulation, spore properties or spore germination.	1.20665e-15
NZ_CP016790.1\|WP_078990319.1\|3592553_3593648_-\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	1.68258e-149
NZ_CP016790.1\|WP_078990316.1\|3586765_3587854_+\|aromatic-acid-exporter-family-protein	gnl\|CDD\|226614	COG4129, COG4129, Predicted membrane protein [Function unknown].	2.37699e-66
NZ_CP016790.1\|WP_061786178.1\|3580805_3581210_-\|peroxide-responsive-transcriptional-repressor-PerR	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	1.69935e-55
NZ_CP016790.1\|WP_061786169.1\|3593785_3594766_+\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	2.01802e-36
NZ_CP016790.1\|WP_078990315.1\|3582520_3583306_-\|ABC-transporter-permease	gnl\|CDD\|226218	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only].	9.08458e-48
NZ_CP016790.1\|WP_025909531.1\|3595430_3595751_-\|YfhH-family-protein	gnl\|CDD\|378063	pfam08838, DUF1811, Protein of unknown function (DUF1811). This is a bacterial family of uncharacterized proteins. Some of the proteins are annotated as being transcriptional regulators. The structure of one of the proteins in this family has revealed a beta-barrel like structure with helix-turn-helix like motif.	1.40097e-57
NZ_CP016790.1\|WP_061786174.1\|3587881_3589630_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP016790.1\|WP_025909539.1\|3589798_3590332_-\|DUF402-domain-containing-protein	gnl\|CDD\|184219	PRK13662, PRK13662, hypothetical protein; Provisional.	4.22971e-126
NZ_CP016790.1\|WP_078990320.1\|3595831_3596491_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187643	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR. These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.65569e-56
NZ_CP016790.1\|WP_025909538.1\|3590636_3590897_-\|hypothetical-protein	gnl\|CDD\|372951	pfam14182, YgaB, YgaB-like protein. The YgaB-like protein family includes the B. subtilis YgaB protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length.	1.7119e-17
NZ_CP016790.1\|WP_025909533.1\|3594821_3595091_-\|hypothetical-protein	gnl\|CDD\|379438	pfam14043, WVELL, WVELL protein. This family includes the B. subtilis YfjH protein, which is functionally uncharacterized. This is not a homolog of E. coli YfjH, a synonym for IscX, which belongs to pfam04384. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length and contain a highly conserved WVELL motif.	7.99796e-42
NZ_CP016790.1\|WP_025909549.1\|3580422_3580794_+\|YgzB-family-protein	gnl\|CDD\|371346	pfam11023, DUF2614, Zinc-ribbon containing domain. This is a family of proteins conserved in the Bacillaceae family. Some members are annotated as being protein YgzB. The function is not known.	2.58097e-74
NZ_CP016790.1\|WP_025909547.1\|3581486_3581957_-\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	6.94289e-86
NZ_CP016790.1\|WP_061786175.1\|3585252_3586551_+\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|183493	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional.	0
NZ_CP016790.1\|WP_078990321.1\|3596522_3597332_-\|recombination-regulator-RecX	gnl\|CDD\|237619	PRK14135, recX, recombination regulator RecX; Provisional.	2.52291e-109
NZ_CP016790.1\|WP_061786177.1\|3582026_3582428_-\|two-pore-domain-potassium-channel-family-protein	gnl\|CDD\|369572	pfam07885, Ion_trans_2, Ion channel. This family includes the two membrane helix type ion channels found in bacteria.	0.00016325
NZ_CP016790.1\|WP_078990318.1\|3591387_3592137_-\|enoyl-[acyl-carrier-protein]-reductase-FabL	gnl\|CDD\|236145	PRK08063, PRK08063, enoyl-[acyl-carrier-protein] reductase FabL.	4.20908e-168

>NZ_CP016790.1|WP_025909538.1|3590636_3590897_-|hypothetical-protein
MEQFTKLVSQQLETMDQLLFLQSEIERCQQIEEELIKLQAEAKLDCIRGEISVMKQRLKEIQQTFEVQTEEIISSYKKDSHYPVSR
>NZ_CP016790.1|WP_025909539.1|3589798_3590332_-|DUF402-domain-containing-protein
MGFPMEGETIQIHSYKHDGKLHRVWDQTTVLKSTSSLMIGGNDRTVVTESDGRTWITREPAICYFHSQYWFNVIGMIREDGIYYYCNISSPFTHDQEALKYIDYDLDIKVYPDMTYTLLDEDEYEKHRQEMNYPEAVDRILHTHVEHLKTWIRQRKGPFAPEFIDTWYERFLTYRHA
>NZ_CP016790.1|WP_061786174.1|3587881_3589630_-|ABC-transporter-ATP-binding-protein
MGSIRRYMEFVKPYKWQIVGTVLIGVVKFSIPLLIPLLLKYVLDDVIDSDTLSDSEKVKQLLMIMGGSFFVFLILRPPVEYYRQYYAQWVSSKVLYDIRNQLFDHIQKLSLRYYSNTRVGEIISRVINDVEQTKNFVITGLMNVWLDMFTIVIAIIIMFTMNVPLTLVSIILLPLYALSVRYFYGRLRHLTRVRSQALAEVQGHLHERVQGISVIRSFAIENHEQAQFDDQNRNFLQKAIDHTNWNAKTFAVVNTITDLAPLIVIAFAGYQVINENLSIGTMVAFVGYIDRLYNPLRRLVNSSTTLTQSVASMDRMFEFIDEQYDIVDSPNAKDALEIKGAVQFNNVSFAYEEDEYILHDINLDVEQGKSVAFVGMSGGGKSTIISLIPRFYDVSSGEILIDGVNVKDYQTKNLRDQIGIVLQDTVLFSDTIRNNILLGKPGATDEDVVAAAKAANAHDFIMKLPNGYDTKVGERGMKLSGGQKQRVSIARVFLKNPPILIFDEATSALDLESEHYIQETLEKLAKERTTFIVAHRLSTITHVDEIVLVQDGKVVEQGSHGELMKKKGYYYDLFTVQQLGQN
>NZ_CP016790.1|WP_078990316.1|3586765_3587854_+|aromatic-acid-exporter-family-protein
MKLGARILKTGIAITLSLLVAELLNLPSPTFAAIAAVFAIQPSIYRSYLTVLEQIQANVIGALLAVGFGLLFGTHPFIIGLTAVMVITLNLKLKIGNTIGLALVTVIAIMESPSDDFVQFAVIRFATILLGVFSAFIVNLIFLPPKYETKLYYKIVGTTEEIIKWIRMNIYHASEYTLLKEDIEKIKDQLTKANQLFDFYKEERTNSKKKVFVKSRKLVLFRQMITTTSHALKTLKQLHRLENDIQHMPQSFQNLIKSEMECLLMYHEQALLKFIGKLKVQLTTSVPTEAYTKKRALIDAFMKYKLLEDDEDNKMLYHLFPLIASIIEYSEELEHLDRLIDSFHNYHKEDNALEINHEREQD
>NZ_CP016790.1|WP_061786175.1|3585252_3586551_+|glutamate-1-semialdehyde-2,1-aminomutase
MQFTKSEQLHGEALQHIVGGVNSPSRSYKAVGGGSPVAMEKAKGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITKAITHAAETGVLYGTPTAHEVKFAKMLKEAMPAMDKVRFVNSGTEAVMTTIRVARAYTGRDKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAKEVITVPFNDIQPFKEALEKWGDQIAGVLVEPIVGNFGIVEPHPGFLEQVNELTHAAGALVIYDEVITAFRFMYGGAQDLLGVKPDLTALGKIIGGGLPIGAYGGKQEIMEKVAPLGPAYQAGTMAGNPASMLSGIACLEVLKEEGVYDKMDKLGAMLEEGILKHARTYKMPITINRLKGALTLYFTTETVTNYEQAENTDGELFAKFFKLMLHQGINLAPSKYEAWFLTTEHTEEDIHVTLEAVEKAFEQLSKEL
>NZ_CP016790.1|WP_078990315.1|3582520_3583306_-|ABC-transporter-permease
MFYFSMFFQYISQYIKTRLQYQADMVVEVVSDLLFQAVNLIFILVVFGHTQFLNGWSREEIIFIYGFFLVPFAVFSSFFNIWDFNERYIVKGEMDRILTRPIHSLFQVILERMELESLFGAITGVAVMIYAGSILDLSFAWYDFFIFILFVLGGALVYAGIFIALASIGFWSDARTSIMPTMYNIGNYGRYPVDIYNNVIRYVLTWILPFAFVGVYPAAYFLGREEWYGYAFLTPVMGVIFFTLAIVLWNVGVKRYRGAGN
>NZ_CP016790.1|WP_061786177.1|3582026_3582428_-|two-pore-domain-potassium-channel-family-protein
MTVSLILVIVFLMVGSMKFLFEKELGEFHFFSLGHFFVLLYSYLTVLLGFSLIYTVCEMSNIEVISGGFYHQEHYFYTLFNSMYFSAITLFSVGYGDMYPVGIGKMFATIEALIGYMMPAVFVIRTVSRNEKV
>NZ_CP016790.1|WP_025909547.1|3581486_3581957_-|thioredoxin-dependent-thiol-peroxidase
MTVTVGEVAPDFKLAANNGEEVALSDYKGQNVVLYFYPKDMTPGCTTEACDFRDAHQEFADLDAVILGVSPDPIDKHQKFIDKHGLPFLLLADEDHQVAEAYGVWKLKKNFGKEYMGIERSTFIINKDGEIAKEYRKVRVKDHVAEALRFIKENLA
>NZ_CP016790.1|WP_061786178.1|3580805_3581210_-|peroxide-responsive-transcriptional-repressor-PerR
MLKETGVRITPQRHAILEYLINSMTHPTADDIYKALEDKFPNMSVATVYNNLRVFKEVGIVKELTYGDASSRFDYITTEHYHVICEKCGKIVDFHYPGLDEVEALAAHITGFEISHHRMEIYGTCPDCTTKKAH
>NZ_CP016790.1|WP_025909549.1|3580422_3580794_+|YgzB-family-protein
MGIKYSSKINKIRTFALSLIFIGFIVMYGGIFFKSSMWLMTIFMLLGLLCIIASTVVYFWIGMLSTKAVQVTCPTCNKHTKMLGRVDLCMYCNEPLTLDPALDGKEFDEKYNRKDTKKADSIS
>NZ_CP016790.1|WP_078990318.1|3591387_3592137_-|enoyl-[acyl-carrier-protein]-reductase-FabL
MEQKVALVTGSSRGIGKEIALRLAKDGYNIVLNYARSKSAALEVAEEVKALGREVLVVKANVGKVEKIKEMFEQIDEAFGRLDVFISNAASGVLRPVMELEETHWDWTMDINSKGYLFCAQEAAKRMEKVGGGKIVTISSLGSIRYLENYTTVGVSKAAVEALTRYLAVELAPKNIIVNAVSGGAVDTEALKHFPNRNELLDDARQHTPTGRMVEPNDMVDAVQFLVSDKANMICGQTLIVDGGRSLLL
>NZ_CP016790.1|WP_061786171.1|3592285_3592510_+|hypothetical-protein
MYVGRDMTELSMMAKTEWRDNELAYFHHSLQQIMPYLNTEGQGIHRQIIEEIENRGGLHRNEADYTHSTNVIYD
>NZ_CP016790.1|WP_078990319.1|3592553_3593648_-|A/G-specific-adenine-glycosylase
MKQSKDIVKDFQIEQFQHDLISWFETEQRILPWRQDQDPYKVWVSEIMLQQTRVDTVIPYFNNFIEKFPTIVDLAYAPEDDVLKAWEGLGYYSRARNLQAAVREVHEQYGGKVPHTPDEISKLKGVGPYTTGAILSIAYGVPQPAVDGNVMRVLSRILSIWDDIAKPKTRKVFEEVVHEIISKDSPSFFNQGLMELGAIVCTPTSPSCLLCPVREHCRAFEQGVQQELPVKSKKKPPRAVQIAAAVVTDEQGNFLIHKRPNKGLLANLWEFPNVEVDLTIGTEQTQLTSFVEADYDTEVVLDPPFTVIQHVFSHIVWNINVYKGVLTGNIDNRDDLKLVSVKEIEEYAFPVSHQKILKEYHKIT
>NZ_CP016790.1|WP_061786169.1|3593785_3594766_+|metal-dependent-hydrolase
MDTGTHIAMGIAIGALATLDPVVAASSVTTEAVMIGVIAGSLAPDLDTILKLKNNAHYIRNHRGITHSIPAVALWPLLIIVIVSLFFPNANLFHLWIWTFAAVIIHVFVDVFNAYGTQALRPFTDKWIALGVINTFDYFIFAVHVVAILIWFLGMSPGPTFITMYSIIALYYVWRFYMRHQIAKKIRQKFPDVVKMNISPTIRFTHWHLAITTKENFHVGRAVGQKIFIYDTFKKIPIPESDIIDVAKRDENLAAFLSFSPIYRWEVDEYSDHIEVRFIDLRYRSKDYYPFVAVVQLDYDLNIICSYTGWIFSEKKLRKKLDYLPH
>NZ_CP016790.1|WP_025909533.1|3594821_3595091_-|hypothetical-protein
MEDIFERLTNQLLAKNDTLSYAQARTWVELFWEDFESTYAKAGYEYKGKEAAEQVVKMYINHYGDKLHEVAVKNPKYKHLLNNDDYLKH
>NZ_CP016790.1|WP_025909532.1|3595227_3595386_+|small,-acid-soluble-spore-protein-K
MRNKEKNFPNQSNNKLEGEPRAKAEFASKRADGTINTNPQERMHASNQRTDG
>NZ_CP016790.1|WP_025909531.1|3595430_3595751_-|YfhH-family-protein
MSDKRYSEMSTYEIQQEISVLNDKARKAEQLGMINEYAVLERKIVMAKSYLLDPSSYKPGEVYEIEGAPGQYFKIDYMNGVFAWGFRLGTSEKEEALPISMLKSDS
>NZ_CP016790.1|WP_078990320.1|3595831_3596491_+|SDR-family-NAD(P)-dependent-oxidoreductase
MKTILITGGATGLGNELAKLYVQNGDQVILLGRNEERLNKTQEELGTSCIATVSADLTNYQELTQKMDNLLSFHSVDVLVNNAGMGHFGPLTSYTKEMIDEVIDTNVKGTIYLTQALLPHLQTREQASILTIISTAGLRGKKNESVYVASKFALRGFVESLKVECEHTSVSCTAAYMGGMDTPFWDNSDHIADKSRLKHPSEVASIIFNQRMTKEDIMM
>NZ_CP016790.1|WP_078990321.1|3596522_3597332_-|recombination-regulator-RecX
MTVITKITTQKNSAERFNVYIDQGKGEEFAFGVDANVLIQYDLKKGRVLDEFELAEIQFADEEKKAYNLAITYLSYRMRSEKEVRDYLKKKEVGDMIVQQVIQRLDSHRYLNDEEFAKAYVLTQVNTTSKGPSVIKRELQEKGIKPDIVQSTLEHFSKEEQIETVVKLIAKLKGKYKKYSEIVMKQKIEQFLVNKGYSFSIINEAMQHVDVEKNSDEEWQALTQQGMKAHRKYAKYSGWEYEQKMKQNLYRKGFSIDQIEAFISSLEEE
>NZ_CP016790.1|WP_167556092.1|3598133_3598319_-|hypothetical-protein
MKKQGIFFMVMVLLCGVLAACSSGNKASGDKGVDLRIWSFIYRRYGWGFWYFKRLLRSCSN

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Crispr_ID: NZ_CP016790_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016790_3

3658860-3658930

Orphan

Consensus_repeat	Method
TTGTATTACATCTTTTGGTTCCTGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016790_3

>merge|NZ_CP016790|3|3658860-3658930|CRISPRCasFinder
TTGTATTACATCTTTTGGTTCCTGTTCACTGTTTATATTACTTATTTGTATTACATCTTTTGGTTCATTAT

>NZ_CP016790|3|3|3658860-3658930|CRISPRCasFinder
TTGTATTACATCTTTTGGTTCCTGTT	CACTGTTTATATTACTTAT
TTGTATTACATCTTTTGGTTCATTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016790.1\|WP_078990352.1\|3652838_3654002_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|274042
NZ_CP016790.1\|WP_078990356.1\|3659028_3659826_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP016790.1\|WP_078990362.1\|3668620_3669511_-\|2-hydroxy-3-oxopropionate-reductase	unknown	unknown	gnl\|CDD\|183197
NZ_CP016790.1\|WP_078990360.1\|3666186_3667020_-\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NZ_CP016790.1\|WP_078990361.1\|3667172_3668618_-\|hydroxyacid-dehydrogenase	unknown	unknown	gnl\|CDD\|215463
NZ_CP016790.1\|WP_078990364.1\|3671240_3672203_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223540
NZ_CP016790.1\|WP_078989027.1\|3657188_3658313_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP016790.1\|WP_078990353.1\|3654305_3655181_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376154
NZ_CP016790.1\|WP_078990350.1\|3651115_3652096_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP016790.1\|WP_078990349.1\|3649090_3649477_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016790.1\|WP_153301211.1\|3655354_3655531_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016790.1\|WP_078990354.1\|3655554_3655776_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016790.1\|WP_078990359.1\|3664744_3666067_-\|TRAP-transporter-large-permease-subunit	unknown	unknown	gnl\|CDD\|237880
NZ_CP016790.1\|WP_167556176.1\|3655841_3655979_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016790.1\|WP_078989081.1\|3662712_3663837_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP016790.1\|WP_078990351.1\|3652230_3652554_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016790.1\|WP_153301210.1\|3648711_3649023_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016790.1\|WP_078990363.1\|3669777_3670413_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP016790.1\|WP_078990357.1\|3660392_3661754_-\|D-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|235096
NZ_CP016790.1\|WP_078990358.1\|3661921_3662467_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380339

Protein	Function_ID	Function_description	E-value
NZ_CP016790.1\|WP_078990352.1\|3652838_3654002_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|274042	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC. The phage integrase family describes a number of recombinases with tyrosine active sites that transiently bind covalently to DNA. Many are associated with mobile DNA elements, including phage, transposons, and phase variation loci. This model represents XerC, one of two closely related chromosomal proteins along with XerD (TIGR02225). XerC and XerD are site-specific recombinases which help resolve chromosome dimers to monomers for cell division after DNA replication. In species with a large chromosome and homologs of XerC on other replicons, the chomosomal copy was preferred for building this model. This model does not detect all XerC, as some apparent XerC examples score in the gray zone between trusted (450) and noise (410) cutoffs, along with some XerD examples. XerC and XerD interact with cell division protein FtsK. [DNA metabolism, DNA replication, recombination, and repair].	4.20423e-26
NZ_CP016790.1\|WP_078990356.1\|3659028_3659826_-\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	3.36172e-53
NZ_CP016790.1\|WP_078990362.1\|3668620_3669511_-\|2-hydroxy-3-oxopropionate-reductase	gnl\|CDD\|183197	PRK11559, garR, tartronate semialdehyde reductase; Provisional.	5.33009e-170
NZ_CP016790.1\|WP_078989081.1\|3662712_3663837_+\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.94314e-20
NZ_CP016790.1\|WP_078990361.1\|3667172_3668618_-\|hydroxyacid-dehydrogenase	gnl\|CDD\|215463	PLN02858, PLN02858, fructose-bisphosphate aldolase.	2.23555e-114
NZ_CP016790.1\|WP_078989027.1\|3657188_3658313_-\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	8.18394e-21
NZ_CP016790.1\|WP_078990353.1\|3654305_3655181_+\|hypothetical-protein	gnl\|CDD\|376154	pfam18731, HEPN_Swt1, Swt1-like HEPN. Swt1-like HEPN. This HEPN domain might have a role in binding and sensing unspliced pre-mRNAs that are specifically targeted by the Swt1 nuclease at the nuclear envelope.	3.17021e-08
NZ_CP016790.1\|WP_078990350.1\|3651115_3652096_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	2.39257e-05
NZ_CP016790.1\|WP_078990359.1\|3664744_3666067_-\|TRAP-transporter-large-permease-subunit	gnl\|CDD\|237880	PRK14984, PRK14984, gluconate transporter.	0
NZ_CP016790.1\|WP_078990363.1\|3669777_3670413_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	1.05147e-45
NZ_CP016790.1\|WP_078990360.1\|3666186_3667020_-\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	1.26331e-119
NZ_CP016790.1\|WP_078990364.1\|3671240_3672203_+\|ATP-binding-protein	gnl\|CDD\|223540	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].	1.18472e-30
NZ_CP016790.1\|WP_078990357.1\|3660392_3661754_-\|D-serine-ammonia-lyase	gnl\|CDD\|235096	PRK02991, PRK02991, D-serine dehydratase; Provisional.	0
NZ_CP016790.1\|WP_078990358.1\|3661921_3662467_+\|cupin-domain-containing-protein	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.83587e-21

>NZ_CP016790.1|WP_078989027.1|3657188_3658313_-|IS4-family-transposase
MDKFTRKTSFEQWFSPIFSTKLEELVESYQLNYYTKKLHIASFLKLFVFAQLNETESLRAVSETLFSDDLQKATHLEAISFSQLGRRLNQVPTEVFQQVFLDLVAQIHEKSHYEQRRETTTPLKIIDSSTLPLNLKNHKWAEFRKTKSGIKLHLRLVYAEKGCSYPDKAVLTNAKEHDRGQLEVLVDDKECMYVFDRGYLDYERFDRMTDDGYVFVSRLRKNAVIRVIEPFKLPEDSLVFSDEMVLIGTPQNRAENAFRLIKVLDSKGNELHLITNRFDLSADEIAELYKSRWAIELFFKWLKQHLNIKKFYAQSEQGVHNQVYIAMIVYCLHVLAQLNTNSSRTYLQISRLLKAAPWKSAHLWLRKIAGKAVP
>NZ_CP016790.1|WP_167556176.1|3655841_3655979_+|hypothetical-protein
MKVPKQSPLKLGKETYGTKNIEVAYKEALEPYFTTKKVTVETTRK
>NZ_CP016790.1|WP_078990354.1|3655554_3655776_+|hypothetical-protein
MRVTSCNFNHIFLELNFELSQEEFCQSEDVMKEMLLCFAEDVLKKFEQTKNIVISKCELFEDDMSVLCVFLFK
>NZ_CP016790.1|WP_153301211.1|3655354_3655531_+|hypothetical-protein
MSLGEYLKDISLNKNEFVIESLQSQNRYLLCTALVLSIIFGVVLLVEKKSKKKRKVMK
>NZ_CP016790.1|WP_078990353.1|3654305_3655181_+|hypothetical-protein
MSDYTYQLAFTNEQFLTGILQELKRGGETELYRLLKGSRLSIDDLGTSYYAPGGGKSRWNAIGINITFHVNPGNIDVLDTDHNKVTLFSICDKFIPGEVGFDLKAIVFVQDLSIDFNAEEDILTDLENQVSHNSNSILKKLLPEDIREKGIYMAEVYTYLYSVENSLRVFIELVGKENYGEQYIDKLNFPRALQSTISNRKEKALEQKWLSLRGNNDLFYLDFKDIGTLIINNWDIFKKYFVTQDFILPKINEMADCRNLIAHNSYVGKTERDLLKSYYNSILRQIEHKFQ
>NZ_CP016790.1|WP_078990352.1|3652838_3654002_+|tyrosine-type-recombinase/integrase
MLEKEISFHSNKNSLEFTGSQSSIASFSKTLKDPSLFQNLPDELIIMEDVSNNKEINDLEMMYLFLHQKKDMDIRKNRMENTIEEYSRDLLIMYKQIIENAFSIGFDLNAQQNPYQVFKLLNHVHIRKFQEWLAAAPLGKGKKSYAVSTLSRKMVVLKGFLSFLYKTKYIEVPLHEKMLSSNVRDIDRPDRDLGKNEVVQILDYYKDHPIVHCLLATLITTGLRINELCHSKISDISYVDGDYWLYVLGKGRHEREVLLHPYIIEEIRKFRRTRRLDFILDGGDDSYIFMTNKGKPYNYKYLSNYLTKKINEADLPFIKTRKNPITPHTLRHAFAQISSDQGASLDQIKIALGHKSIQTTSIYLQKKSRRENNAGHAWKNSSILNSL
>NZ_CP016790.1|WP_078990351.1|3652230_3652554_-|hypothetical-protein
MISESLYRALDESTFFVSKYEVQVKTYFLQKSKYGLRVQVSRFIDKRGSLSREKDTVEIKLLIGGGGVVIDKTFKSITLEKPTRKKVEECITDFLENASEYCKQSKN
>NZ_CP016790.1|WP_078990350.1|3651115_3652096_-|helix-turn-helix-domain-containing-protein
MGLEDKKKQITTKQAAELLGVAENTVLSYSRQGILTAVNEKSWQIDNTKYFYIDDVEEVKDKLKKPGLSTGEVAAQLGVSTVTVFNYIKDGKLTAEKEVYRGREIYFIKQTELERFQKNYKNMRRRNNKEFYSKPNKHGWFQLFIHERSEEHGRLMVGEDEDYFLLTASGNKIPYTKIEQYGFKPVYLIERGSIISKRKFTKFEFPYENNIESNIYSFLDICYEYITPTNMKMNINKEKIELEIKPYCFPYDTLDEDTIKTIKEYMVEGSIISTIKGIYIDSEYDVLSLEIPTQVKDSLKKIASERNLSLEELVSEIFVEYVNEKL
>NZ_CP016790.1|WP_078990349.1|3649090_3649477_-|hypothetical-protein
MSHKTCIKLLNVVNPHFPDATPFINNKEIEYIYEKKSSTEIKYESLSIDNVVLYTFDFESQEGNLDNLKSYCVLQNKSAEYCKLICRCYFTWSGGHDSLSWQSQPLILLASWLETHARRGSMSSCNIV
>NZ_CP016790.1|WP_153301210.1|3648711_3649023_-|hypothetical-protein
MDEWDNEITVLRYILTNSKLNELIILKELSNFIEGIAILKPSDNFVQFKGPKVVDEGIIKTIIEAELVEDFGKFLNDCGLDISLKVDITPEGEKNYILIIAAQ
>NZ_CP016790.1|WP_078990356.1|3659028_3659826_-|ParA-family-protein
MAEVYSISMNKGGVGKTSLVTNLAGAITKQMKKKVLIIDTDGQGNSSIAFGFKQPNDFEYTIYDVLMGEKNAKDVIIEVSPHLHILPSNKDMNFLEFDILPNLHQYGEPFKLLTRHVVGIQDQYDYIFIDTPPSMGLVAGNVLAIADKVIIPFAPETFGVNGLINVIEGVSDFKKKENPSLEIAGVVGMMLDSRTSLHGELIKQARQYCFEHDINMCDTVIPKSIRFANATAYDGKPATWSDSNNPIVKAYYELLEEVLPHGKKG
>NZ_CP016790.1|WP_078990357.1|3660392_3661754_-|D-serine-ammonia-lyase
MKEIEYRDLQTWEDHYPLLNKLISMEEVLWLNPNIEKFKTGIKKSPLTQDDVKDAEERLKRFAPYIAKVFPETKKMNGIIESPLARIPSMKQSLEQNYQQPILGELLLKCDSHLPISGSIKARGGIYEVLKHAEELALQHQLLTIQDDYSILDSDRFRAFFSQYSIAVGSTGNLGLSIGIMSAKLGFNVTVHMSADAKQWKKDLLRNKNVNVIEYEADYSKAVEEGRLQADGDPTCYFVDDENSYDLFLGYAVAASRLKKQLEELDITIDENHPLFVYLPCGVGGGPGGIAFGLKLLYQDHVHCFFAEPTHSPCMLLGLMTGLHDKISVQDIGVDNVTDADGLAVGRPSGFVGKTIEPFLSGNYTVSDEQLYKLLKELVDTEGIHLEPSALAGMIGPIRLCKEGTDYLLKHNLIEKMRKGTHIIWGTGGNMVPEEMMKQYYQKGLNLTLENQK
>NZ_CP016790.1|WP_078990358.1|3661921_3662467_+|cupin-domain-containing-protein
MENIDIGKKVVKYRKAKDLSIRELAKLAEITPSMLSQIERGLANPSIQTLKVLAKSLDVPTFSFFIEETNTVDLVVRSSHRKKMIIENLSYELVSPDFTGNLATAIMNFPPNTASSEKQLEHKGEEVAYVLEGKIKVFLDDEEYILEPGDSVKIPAQMKHKWENNFNENAAILFSVTPPAF
>NZ_CP016790.1|WP_078989081.1|3662712_3663837_+|IS4-family-transposase
MDKFTRKTSFEQWFSPIFSTKLEELVESYQLNYYTKKLHIASFLKLFVFAQLNETESLRAVSETLFSDDLQKATHLEAISFSQLGRRLNQVPTEVFQQVFLDLVAQIHEKSHYEQRRETTTPLKIIDSSTLPLNLKNHKWAEFRKTKSGIKLHLRLVYAKKGCSYPDKTVLTNAKEHDRGQLEVLVDDKECMYVFDRGYLDYERFDRMTDDGYVFVSRLRKNAVIRVIEPFKLPEDSLVFSDEMVLIGTPQNRAENAFRLIKVLDSKGNELHLITNRFDLSADEIAELYKSRWAIELFFKWLKQHLNIKKFYAQSEQGVHNQVYIAMIVYCLHVLAQLNTNSSRTYLQISRLLKAAPWKSAHLWLRKIAGKAVP
>NZ_CP016790.1|WP_078990359.1|3664744_3666067_-|TRAP-transporter-large-permease-subunit
MPIISVCIGVALLLILMMVFKLNAFIALIIVALIVGIIEGMSPIDAMASVQSGLGGTLGSLTMIIIFGAILGKLMTDSGGAQRIATTLIQAFGKKRVQLAAVLTSSVVGIALFFETGVVVLIPLVFTIATAAGVPVLYVGMPVIAALITMHGFVPPHPGPTAVASVFEANIGKTLIYGIIIAIPAVIIGGPLFTKLFKKEDLEVEIPKGLFNPKEFTEEEMPGFTTSILTSLMPVILIASQVIVEIFMPESAIMPFFDFIGNPNVALLLSVILAFFTFGLNRGKKMKEVMESLTDAVSGIAMILLIIAAGGAFKQVLIDSHIDQYITEIMAGSTLSPLLLTWIIAAILRVAVGSATVAGMTAAGIAAPLIGATGVSPELMVLAAGAGSITFSHVNDAGFWIYKEYFNLSIGKTIKTWSVMVTILSLVGLAGVLILNMFIS
>NZ_CP016790.1|WP_078990360.1|3666186_3667020_-|class-II-fructose-bisphosphate-aldolase
MLANTKDVLINAQKGKYGVAAFNVYSLETVQAAIKAAEKENQPVIIALGERYFPTVDVEGFSAMVRAMEEKASIPVSLHLDHAYEKESIIRAIRCGFSSVMFDGSAYDLEQNMRLTKEIVDIAHMAGVSVEAEIGSLARGAFSDEEEGNGTLTDPKSAKEFVAETGVDFLAAAIGTVHGMYKGEPKIDLGLLERIRQVVDIPLVLHGGSGTPDEIIKQAIQSGICKINVNTEVSMAAVSHLQKYFENKEMVHLSTVMADMQQSMEPVMTKFVKLFSN
>NZ_CP016790.1|WP_078990361.1|3667172_3668618_-|hydroxyacid-dehydrogenase
MSTIKSTDKRLVNEVFDKIPAVDRKIVQEMLKNELADLNKKIIVLDDDPTGVQTVHDISVYTDWSVDSIDKGFAEQNAMFFILTNSRGFTAAETEKAHKEIAENALEVAKKQSKDFIIISRGDSTLRGHYPLETEVLKETIESGSNIKFDGEVIVPFFKEGGRFTVDNIHYVQYEDYLVPAGETEFAKDRTFGYTKSHLGEWAEEKSNGEFKAENATYISLESLRALEVEKITNQLLEVSDFNKVVVNAVDYVDVEVFVISLIKAMKAGKHFMFRSAAALTKVIGGVSDRGLLTRDELIKEESNHGGLIIVGSHVKKTTEQLEELKKYELIEFIEFNVHLVLQPEQFKAETDRVIETSENLIRSGKTVAIYTKRERMDLGEGKKEEELKLSVKISDAVTSIVQRLEVRPSYIVAKGGITSSDIGTKGLAVKRATVAGQIKPGIPVWFTGEESKFPGISYIIFPGNVGEKTTLKETVELLNK
>NZ_CP016790.1|WP_078990362.1|3668620_3669511_-|2-hydroxy-3-oxopropionate-reductase
MKRIGFIGLGIMGKPMASNLLSKGYQVTVNDINEATVQSLVELGAVSAESPKMIGESCEVIITMLPANKHVKQVILDENGVLSGAKPGSVIIDMSSITPVVSKEIAALASEKGVEMLDAPVSGGEPKAIDGTLAIMVGGKEEVFEQVKDVLYAIGTEVTLVGGNGSGTTAKLANQVIVNLNIAAMSEALVLASKAGIDVEKMYQAIRGGLAGSAVLDAKAPLILDRNFVAGGRIDINMKDITNVIDTAHEIGVPMPLSSQLLEIFHALKVDGKSSDDHGGIVQYFEKLANVEVRRV
>NZ_CP016790.1|WP_078990363.1|3669777_3670413_+|GntR-family-transcriptional-regulator
MSQDINNSRPASHQAYEMIRDRILNGDIPSGTKIVEERLAQELGCSRTPIREALRQLIYEGLIVNKRVVQPTEKDLRNLFQVRILLEGFSSQTAAIYLPEEELNLLSHCIKVGREGTTEEVMKANERFHEIIVQASGNSQIIDIMDRMKSIIYLFRKTVVLHQRPRLIEEHEEIYEAIKARNGQAAKQLMENHLQADLDFCLHILSSTNYE
>NZ_CP016790.1|WP_078990364.1|3671240_3672203_+|ATP-binding-protein
MATADQIKMLIKSHFENDEDRFKTLVLQLAAYEAKNGHQSFARDIRDLVEKSKVKTNVIPFNRKLDDLITTDLSEKKLVELVVSKDIKTRIERILLEYWQKDKLKKHGLKNRRKILLAGEPGTGKTLTASVLAGETNLPLCTIVMDKLVTKYMGETSVKLRQIFDFISSNPAVYLFDEFDTIGTERSLDNDVGEIRRILNSFLQFIEQDNSESIIVAATNNPKLLDQALFRRFDDVIHYTLPCKEQIRRLIKNKIGRYKSKNLSLNKVVENADSLSHAEISMATNDAVKEAILLDLESIDEDLLIKMIKERKAAYKRGDI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

551484 : 558063

Bacillus_phage(42.86%)

integrase

attL 542698:542713|attR 558456:558471

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
542698:542713	attL	NA	NA	NA	NA
WP_025909407.1\|551484_551850_+	iron-sulfur cluster assembly accessory protein	A0A2H4N7M3	Lake_Baikal_phage	4.4e-20	47.1
WP_061786274.1\|552054_553092_+\|integrase	tyrosine-type recombinase/integrase	A0A142F1N9	Bacillus_phage	1.2e-33	29.4
WP_078989132.1\|553244_554063_+	helix-turn-helix domain-containing protein	A0A288WFX2	Bacillus_phage	1.1e-66	50.7
WP_078989133.1\|554104_554395_-	hypothetical protein	NA	NA	NA	NA
WP_061786271.1\|555215_555446_-	helix-turn-helix transcriptional regulator	A0A0S2GLH4	Bacillus_phage	1.5e-21	64.4
WP_153301124.1\|555728_557045_+	cell division protein FtsK	M1I9G0	Bacillus_virus	1.3e-109	48.9
WP_061786269.1\|556980_557571_+	hypothetical protein	B3RH37	Bacillus_virus	3.3e-70	62.1
WP_061786268.1\|557592_558063_+	hypothetical protein	A6XML4	Bacillus_virus	4.9e-16	36.5
558456:558471	attR	NA	NA	NA	NA

DBSCAN-SWA_2

820540 : 875784

Bacillus_virus(16.67%)

transposase,protease,coat,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025908562.1\|820540_821806_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.0e-149	65.5
WP_025908561.1\|821949_823617_+\|protease	ATP-dependent protease LonB	NA	NA	NA	NA
WP_061785020.1\|823876_826201_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	3.4e-182	44.7
WP_025908559.1\|826197_826785_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_025908558.1\|826842_827328_-	hypothetical protein	NA	NA	NA	NA
WP_025908557.1\|827533_828874_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_078989221.1\|828887_829721_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_078989222.1\|829736_830669_+	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_061785021.1\|830668_831454_+	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_061785022.1\|831467_832448_+	porphobilinogen synthase	NA	NA	NA	NA
WP_167556101.1\|833874_835263_+	stage VI sporulation protein D	NA	NA	NA	NA
WP_078989223.1\|835364_836411_+\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_025908549.1\|836715_836919_-	hypothetical protein	NA	NA	NA	NA
WP_025908548.1\|837425_840071_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	2.4e-160	42.3
WP_153301123.1\|840235_841813_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	7.4e-141	51.0
WP_076512655.1\|842011_843313_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_078989224.1\|843438_846237_+	VWA domain-containing protein	A0A0K2FHC7	Achromobacter_phage	2.8e-05	30.4
WP_061785209.1\|846353_846911_+	DUF420 domain-containing protein	NA	NA	NA	NA
WP_078989225.1\|846941_848780_-	hypothetical protein	NA	NA	NA	NA
WP_078989226.1\|848793_849921_+	type II secretion system F family protein	NA	NA	NA	NA
WP_078989227.1\|850257_850680_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_078989228.1\|850691_851444_+	prepilin peptidase	NA	NA	NA	NA
WP_025908541.1\|851457_852450_+	pilus assembly protein PilM	NA	NA	NA	NA
WP_153301131.1\|852446_853073_+	hypothetical protein	NA	NA	NA	NA
WP_142925375.1\|853069_853777_+	hypothetical protein	NA	NA	NA	NA
WP_078989231.1\|853776_854247_+	type II secretion system protein	NA	NA	NA	NA
WP_078989232.1\|854351_855350_+	SPOR domain-containing protein	NA	NA	NA	NA
WP_025908536.1\|855459_856035_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_025908535.1\|856051_856738_+	DNA repair protein RadC	NA	NA	NA	NA
WP_025908534.1\|856966_857992_+	rod shape-determining protein	NA	NA	NA	NA
WP_078989233.1\|858011_858893_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_025908532.1\|858892_859414_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_025908530.1\|860217_861018_+	septum site-determining protein MinD	NA	NA	NA	NA
WP_076512671.1\|861158_861950_+	M23 family metallopeptidase	NA	NA	NA	NA
WP_061785222.1\|861942_862806_+	stage IV sporulation protein FB	NA	NA	NA	NA
WP_078989234.1\|862894_864352_+	Rne/Rng family ribonuclease	NA	NA	NA	NA
WP_025908526.1\|864519_864828_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_078989235.1\|864840_865173_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_025908524.1\|865189_865483_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_025908523.1\|865662_866202_+	sporulation protein	NA	NA	NA	NA
WP_078989236.1\|866258_867545_+	GTPase ObgE	NA	NA	NA	NA
WP_025908521.1\|867574_868024_+	ACT domain-containing protein	NA	NA	NA	NA
WP_061785224.1\|868056_868926_+	prephenate dehydratase	NA	NA	NA	NA
WP_061785225.1\|868943_869489_-	transcription repressor NadR	NA	NA	NA	NA
WP_078989237.1\|869493_870630_-	IscS subfamily cysteine desulfurase	A0A2K9L679	Tupanvirus	8.3e-09	24.2
WP_025908516.1\|872342_873194_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_078989238.1\|873180_874281_+	quinolinate synthase NadA	NA	NA	NA	NA
WP_078989239.1\|874488_875784_+\|coat	SafA/ExsA family spore coat assembly protein	NA	NA	NA	NA

DBSCAN-SWA_3

1143780 : 1153103

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025908349.1\|1143780_1144497_+	response regulator transcription factor	W8CYM9	Bacillus_phage	4.4e-48	42.6
WP_078989308.1\|1144496_1146275_+	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	1.3e-24	33.1
WP_078989309.1\|1146433_1147117_+	peptidoglycan DD-metalloendopeptidase family protein	A0A2D0WXW0	Clostridium_phage	3.3e-13	37.8
WP_061784721.1\|1147152_1148727_-	phosphoglycerate dehydrogenase	A0A2H4PQU8	Staphylococcus_phage	1.9e-27	28.8
WP_025908353.1\|1149388_1149964_+	ECF transporter S component	NA	NA	NA	NA
WP_061784720.1\|1150010_1150259_-	ferredoxin	A0A127AYY7	Bacillus_phage	5.6e-19	56.0
WP_078990515.1\|1150517_1151570_+	recombinase RecQ	NA	NA	NA	NA
WP_078989310.1\|1151585_1153103_+	ATP-dependent DNA helicase RecQ	A0A1V0SGM9	Hokovirus	1.4e-51	36.1

DBSCAN-SWA_4

1363871 : 1436823

Bacillus_virus(15.38%)

protease,tRNA,transposase,integrase,coat

attL 1375915:1375931|attR 1438253:1438269

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078989374.1\|1363871_1364786_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_061784564.1\|1364814_1365771_+	bifunctional riboflavin kinase/FAD synthetase	A0A1V0SD03	Indivirus	5.0e-07	30.1
WP_025908938.1\|1365917_1366187_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_025908937.1\|1366358_1368485_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_025908936.1\|1368605_1369577_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_025908935.1\|1369648_1370893_+	insulinase family protein	G3MBJ8	Bacillus_virus	4.7e-50	31.4
WP_035320336.1\|1371283_1371517_+	YlmC/YmxH family sporulation protein	NA	NA	NA	NA
WP_078989375.1\|1372041_1372941_+	dipicolinic acid synthetase subunit A	NA	NA	NA	NA
WP_025910560.1\|1372940_1373534_+	dipicolinate synthase subunit B	NA	NA	NA	NA
WP_061784560.1\|1373719_1374763_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_061784559.1\|1374803_1376030_+	aspartate kinase	NA	NA	NA	NA
1375915:1375931	attL	NA	NA	NA	NA
WP_025910557.1\|1376110_1376983_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_078989376.1\|1378613_1380275_+	ribonuclease J	NA	NA	NA	NA
WP_078989377.1\|1380582_1381344_+\|protease	ClpP family protease	NA	NA	NA	NA
WP_025908582.1\|1381340_1381550_+	hypothetical protein	NA	NA	NA	NA
WP_078989081.1\|1384258_1385383_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_025908584.1\|1385822_1386548_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_078989378.1\|1386675_1387755_+	BMP family protein	A0A0A7DN02	Lactobacillus_phage	1.4e-50	35.6
WP_061785722.1\|1387880_1389410_+	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	2.6e-13	28.5
WP_153301135.1\|1389406_1390465_+	ABC transporter permease	NA	NA	NA	NA
WP_078989380.1\|1390461_1391421_+	ABC transporter permease	NA	NA	NA	NA
WP_025908589.1\|1392044_1393340_+	insulinase family protein	A0A1X9I714	Streptococcus_phage	4.5e-51	30.6
WP_078989381.1\|1394679_1395405_+	SDR family oxidoreductase	M1NMS3	Moumouvirus	7.6e-08	31.6
WP_061785726.1\|1395471_1395732_+	DUF3243 domain-containing protein	NA	NA	NA	NA
WP_035320247.1\|1396126_1396918_+	DUF3388 domain-containing protein	NA	NA	NA	NA
WP_025908594.1\|1396939_1397878_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_025908595.1\|1397965_1398550_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_061785730.1\|1398563_1399802_+	competence/damage-inducible protein A	NA	NA	NA	NA
WP_025908597.1\|1400053_1401091_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	7.3e-137	74.3
WP_163070847.1\|1401369_1402932_+	ribonuclease Y	NA	NA	NA	NA
WP_025908599.1\|1402991_1403789_+	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA
WP_003181955.1\|1404023_1404284_+	stage V sporulation protein SpoVS	J9PTX7	Bacillus_phage	2.5e-09	43.8
WP_061785728.1\|1404362_1405277_+	membrane dipeptidase	NA	NA	NA	NA
WP_025908601.1\|1405456_1407214_+	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA
WP_025908602.1\|1407200_1408067_+	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA
WP_078989382.1\|1408504_1409548_+	L-threonine 3-dehydrogenase	NA	NA	NA	NA
WP_078989383.1\|1409567_1410746_+	glycine C-acetyltransferase	V5LQ39	Emiliania_huxleyi_virus	2.0e-45	31.9
WP_076512259.1\|1410974_1412504_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_061785716.1\|1412505_1412937_+	hypothetical protein	NA	NA	NA	NA
WP_025908608.1\|1413135_1413681_+\|coat	outer spore coat protein CotE	NA	NA	NA	NA
WP_078989384.1\|1413817_1416460_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	1.3e-36	25.0
WP_078989385.1\|1416479_1418381_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	8.5e-67	31.6
WP_153301136.1\|1418620_1419172_+	hypothetical protein	NA	NA	NA	NA
WP_078990518.1\|1419507_1420458_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_025908613.1\|1420492_1420717_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_078989387.1\|1420951_1421908_+	stage V sporulation protein K	G3MAX6	Bacillus_virus	1.2e-53	40.8
WP_061785712.1\|1421938_1422550_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA
WP_025908616.1\|1422797_1424060_+	GTPase HflX	NA	NA	NA	NA
WP_025908617.1\|1424075_1425338_+	methionine gamma-lyase family protein	NA	NA	NA	NA
WP_078989388.1\|1425530_1425953_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_025908619.1\|1426034_1427369_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_078989389.1\|1427475_1428624_-\|integrase	site-specific integrase	S5MBZ0	Brevibacillus_phage	1.4e-59	37.3
WP_078989390.1\|1428655_1429180_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_078989391.1\|1429185_1429560_-	hypothetical protein	NA	NA	NA	NA
WP_078989392.1\|1429850_1430531_+	hypothetical protein	NA	NA	NA	NA
WP_078989393.1\|1431975_1432335_+	hypothetical protein	NA	NA	NA	NA
WP_078989394.1\|1433116_1434679_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_078989395.1\|1435698_1436823_-\|transposase	IS4 family transposase	NA	NA	NA	NA
1438253:1438269	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3405692 : 3447048

uncultured_Caudovirales_phage(36.36%)

head,portal,protease,tail,transposase,terminase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078989027.1\|3405692_3406817_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_153301195.1\|3406946_3407525_-	hypothetical protein	M1PS09	Streptococcus_phage	4.3e-30	39.8
WP_061785172.1\|3408025_3408634_-	hypothetical protein	NA	NA	NA	NA
WP_078990228.1\|3408832_3409861_-	LysM peptidoglycan-binding domain-containing protein	A0A0S2SXM5	Bacillus_phage	2.5e-145	74.3
WP_025906981.1\|3409916_3410138_-	hypothetical protein	A0A0S2SXR1	Bacillus_phage	2.5e-23	73.9
WP_078990229.1\|3410200_3410566_-	hypothetical protein	NA	NA	NA	NA
WP_078990230.1\|3410644_3410932_-	hypothetical protein	NA	NA	NA	NA
WP_078990231.1\|3410992_3416689_-	hypothetical protein	A0A142F1N2	Bacillus_phage	2.0e-87	38.8
WP_078990232.1\|3416685_3418131_-	hypothetical protein	A0A2H4JH21	uncultured_Caudovirales_phage	6.7e-88	37.9
WP_078990233.1\|3418136_3421745_-	hypothetical protein	X2KQI5	Enterococcus_phage	1.8e-65	43.8
WP_153301196.1\|3421831_3421993_-	hypothetical protein	NA	NA	NA	NA
WP_078990234.1\|3422010_3422361_-	hypothetical protein	Q4ZD67	Staphylococcus_phage	9.0e-23	51.7
WP_078990235.1\|3422416_3422602_-	hypothetical protein	A0A2H4J420	uncultured_Caudovirales_phage	2.4e-11	52.5
WP_078990236.1\|3422616_3423231_-	hypothetical protein	A0A2H4J9R4	uncultured_Caudovirales_phage	1.4e-31	40.8
WP_061785163.1\|3423245_3423623_-	hypothetical protein	A0A2H4J9Z2	uncultured_Caudovirales_phage	1.2e-17	40.0
WP_061785162.1\|3423622_3424015_-	hypothetical protein	A0A2H4JA97	uncultured_Caudovirales_phage	2.2e-30	54.2
WP_078990237.1\|3424011_3424383_-\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
WP_061785174.1\|3424375_3424651_-	hypothetical protein	A0A2H4JF26	uncultured_Caudovirales_phage	8.0e-27	72.6
WP_062686517.1\|3424692_3425850_-\|capsid	phage major capsid protein	A0A2H4JH29	uncultured_Caudovirales_phage	9.2e-165	78.1
WP_078990238.1\|3425867_3426644_-\|protease	Clp protease ClpP	A0A0A7RWX3	Clostridium_phage	1.9e-52	53.0
WP_153301197.1\|3426627_3427791_-\|portal	phage portal protein	A0A2H4JAJ1	uncultured_Caudovirales_phage	2.3e-179	78.6
WP_078990239.1\|3427812_3428586_-	site-specific DNA-methyltransferase	A0A0H3UZL7	Geobacillus_virus	8.0e-80	57.4
WP_078990240.1\|3428685_3430308_-\|terminase	terminase large subunit	A0A059T7Q8	Listeria_phage	2.7e-231	71.5
WP_078990241.1\|3430304_3430613_-	hypothetical protein	E2ELI1	Clostridium_phage	4.1e-11	39.2
WP_153301198.1\|3430733_3430970_-	hypothetical protein	A0A1D8ETH8	Propionibacterium_phage	6.5e-09	42.0
WP_078990243.1\|3431502_3431838_-	HNH endonuclease	D2XR61	Bacillus_phage	3.6e-45	76.6
WP_078990244.1\|3431880_3432693_-	hypothetical protein	NA	NA	NA	NA
WP_078990245.1\|3432720_3432978_-	hypothetical protein	NA	NA	NA	NA
WP_078990246.1\|3433078_3433306_-	helix-turn-helix domain-containing protein	A0A1Z1LZP5	Bacillus_phage	6.2e-09	42.0
WP_153301199.1\|3433541_3433703_-	hypothetical protein	NA	NA	NA	NA
WP_078990247.1\|3434072_3434210_+	rubredoxin-like protein	NA	NA	NA	NA
WP_078990248.1\|3434206_3434518_-	hypothetical protein	NA	NA	NA	NA
WP_153301200.1\|3434579_3434732_-	hypothetical protein	A0A0S2SXP4	Bacillus_phage	2.2e-10	65.3
WP_078990571.1\|3434950_3435400_-	transcriptional regulator	A0A0S2SXN1	Bacillus_phage	1.6e-64	85.9
WP_078989485.1\|3435913_3437038_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_078990249.1\|3437196_3437649_-	hypothetical protein	A0A2H4J255	uncultured_Caudovirales_phage	2.6e-14	70.2
WP_025907762.1\|3437632_3437818_-	hypothetical protein	NA	NA	NA	NA
WP_153301201.1\|3438343_3438514_-	hypothetical protein	NA	NA	NA	NA
WP_078990250.1\|3438514_3438697_-	Fur-regulated basic protein FbpA	A0A1L2JY24	Aeribacillus_phage	3.2e-08	48.3
WP_078990251.1\|3438707_3440030_-	replicative DNA helicase	A0A0U4B0A1	Bacillus_phage	2.2e-106	48.9
WP_061785146.1\|3439986_3440292_-	hypothetical protein	NA	NA	NA	NA
WP_025907767.1\|3440297_3441083_-	hypothetical protein	S6BFM4	Thermus_phage	3.2e-52	47.0
WP_025907768.1\|3441255_3442182_-	recombinase RecT	A0A0C5AEC1	Paenibacillus_phage	1.3e-55	43.4
WP_078990252.1\|3442174_3443710_-	AAA family ATPase	A0A0C5AN00	Paenibacillus_phage	3.9e-86	40.3
WP_025907770.1\|3443817_3444018_-	hypothetical protein	NA	NA	NA	NA
WP_167556174.1\|3444298_3444448_-	hypothetical protein	A0A2H4J258	uncultured_Caudovirales_phage	2.9e-07	53.1
WP_061785144.1\|3444526_3444760_-	helix-turn-helix transcriptional regulator	A0A2H4JAQ9	uncultured_Caudovirales_phage	2.9e-25	78.4
WP_061785143.1\|3444955_3445612_+	helix-turn-helix domain-containing protein	A0A1B1P7L1	Bacillus_phage	2.8e-86	69.9
WP_061785142.1\|3445623_3447048_+	recombinase family protein	A0A2H4J3Q1	uncultured_Caudovirales_phage	3.0e-157	58.9

DBSCAN-SWA_6

3620974 : 3658313

Planktothrix_phage(25.0%)

integrase,transposase,bacteriocin

attL 3630988:3631047|attR 3657044:3658451

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078989485.1\|3620974_3622099_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_078990333.1\|3622294_3622909_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_025909872.1\|3624534_3625275_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-30	40.6
WP_025909871.1\|3625299_3626028_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_078990334.1\|3626094_3626931_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_025909869.1\|3627365_3628241_-	YitT family protein	M1Q1P6	Streptococcus_phage	1.4e-27	30.1
WP_139109175.1\|3628424_3628553_-	cyclic lactone autoinducer peptide	NA	NA	NA	NA
WP_076512900.1\|3628533_3629169_-	accessory gene regulator B family protein	NA	NA	NA	NA
WP_076512921.1\|3629417_3629753_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_076512899.1\|3629749_3630262_+	DUF1129 family protein	NA	NA	NA	NA
WP_076512898.1\|3630434_3630950_-	stage II sporulation protein M	NA	NA	NA	NA
3630988:3631047	attL	NA	NA	NA	NA
WP_078989027.1\|3631132_3632257_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_076512897.1\|3632473_3632674_-\|bacteriocin	circular bacteriocin, circularin A/uberolysin family	NA	NA	NA	NA
WP_076512897.1\|3632706_3632907_-\|bacteriocin	circular bacteriocin, circularin A/uberolysin family	NA	NA	NA	NA
WP_078990337.1\|3632945_3633146_-	hypothetical protein	NA	NA	NA	NA
WP_076512895.1\|3633177_3633873_-	YIP1 family protein	NA	NA	NA	NA
WP_153301208.1\|3634055_3634226_-	hypothetical protein	NA	NA	NA	NA
WP_078990338.1\|3634218_3634944_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.4e-22	34.3
WP_078990339.1\|3634958_3636746_-	hypothetical protein	NA	NA	NA	NA
WP_078990340.1\|3637032_3638370_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_078990341.1\|3638383_3639145_+	response regulator transcription factor	NA	NA	NA	NA
WP_078990342.1\|3639220_3639475_-	signal peptidase I	NA	NA	NA	NA
WP_025907303.1\|3639502_3640417_-	methylisocitrate lyase	NA	NA	NA	NA
WP_025907301.1\|3640433_3641870_-	bifunctional 2-methylcitrate dehydratase/aconitate hydratase	NA	NA	NA	NA
WP_076512890.1\|3641965_3643075_-	citrate synthase	NA	NA	NA	NA
WP_078990343.1\|3643064_3643298_-	hypothetical protein	NA	NA	NA	NA
WP_076512889.1\|3643913_3644135_+	DUF3923 family protein	NA	NA	NA	NA
WP_078990344.1\|3644217_3644613_+	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_078990345.1\|3644632_3647437_-	DEAD/DEAH box helicase	A0A291LA02	Bordetella_phage	1.8e-28	30.2
WP_078990346.1\|3647612_3648353_-	hypothetical protein	NA	NA	NA	NA
WP_078990347.1\|3648370_3648667_-	ATP-binding protein	NA	NA	NA	NA
WP_153301210.1\|3648711_3649023_-	hypothetical protein	NA	NA	NA	NA
WP_078990349.1\|3649090_3649477_-	hypothetical protein	NA	NA	NA	NA
WP_078990350.1\|3651115_3652096_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_078990351.1\|3652230_3652554_-	hypothetical protein	NA	NA	NA	NA
WP_078990352.1\|3652838_3654002_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_078990353.1\|3654305_3655181_+	hypothetical protein	NA	NA	NA	NA
WP_153301211.1\|3655354_3655531_+	hypothetical protein	NA	NA	NA	NA
WP_078990354.1\|3655554_3655776_+	hypothetical protein	NA	NA	NA	NA
WP_167556176.1\|3655841_3655979_+	hypothetical protein	NA	NA	NA	NA
WP_078989027.1\|3657188_3658313_-\|transposase	IS4 family transposase	NA	NA	NA	NA
3657044:3658451	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3838718 : 3846974

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025909070.1\|3838718_3839297_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.5e-30	38.1
WP_025909071.1\|3839293_3840331_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F0L1	Synechococcus_phage	1.7e-69	44.7
WP_078990463.1\|3840357_3841770_-	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	8.9e-53	31.7
WP_078990464.1\|3841754_3843977_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	6.3e-162	42.8
WP_076513836.1\|3843960_3844644_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_025909075.1\|3844640_3844892_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_025909076.1\|3844899_3845607_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3FGF0	Synechococcus_phage	5.1e-41	39.5
WP_025909077.1\|3845681_3846974_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.4e-19	25.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016791

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP016790

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection