CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP020039	Streptomyces sp. 3211 isolate 3 chromosome, complete genome	18 crisprs	csa3,WYL,DEDDh,cas3,DinG	9	8	3	1
NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	0 crisprs	NA	0	0	5	0
NZ_CP020041	Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence	0 crisprs	NA	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP020039_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_1

457594-457694

Orphan

Consensus_repeat	Method
GCCGCCCGTGGACCCGCCGGACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_1

>merge|NZ_CP020039|1|457594-457694|CRISPRCasFinder
GGAGCTGCCGGAACCGCCGGACGAGCCGCCCGTGGACCCGCCGGACGAACCTCCGGAACCGCCCGAGGAGCCCGAACCGCCGCCGGTGGACCCGCCGGACG

>NZ_CP020039|1|1|457594-457694|CRISPRCasFinder
GGAGCTGCCGGAACCGCCGGACG	AGCCGCCCGTGGACCCGCCGGACGAACCTCCGGAACCGCCCGAGGAGCCCGAACC
GCCGCCGGTGGACCCGCCGGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_053170869.1\|455323_456076_-\|DUF255-domain-containing-protein	unknown	unknown	gnl\|CDD\|239251
NZ_CP020039.1\|WP_079403497.1\|462543_463383_-\|dienelactone-hydrolase	unknown	unknown	gnl\|CDD\|223489
NZ_CP020039.1\|WP_079403495.1\|460069_460408_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|163261
NZ_CP020039.1\|WP_079403499.1\|465582_466242_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319828
NZ_CP020039.1\|WP_079403488.1\|448414_449245_-\|ammonia-dependent-NAD(+)-synthetase	unknown	unknown	gnl\|CDD\|234831
NZ_CP020039.1\|WP_030387657.1\|452484_453216_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP020039.1\|WP_030387664.1\|458335_459052_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079407681.1\|466310_467501_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224332
NZ_CP020039.1\|WP_030387660.1\|454691_455327_-\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP020039.1\|WP_053170876.1\|453921_454695_-\|cytochrome-C-biogenesis-protein-CcdA	unknown	unknown	gnl\|CDD\|280792
NZ_CP020039.1\|WP_030387673.1\|468052_468643_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP020039.1\|WP_079403498.1\|463626_465528_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224926
NZ_CP020039.1\|WP_079403500.1\|469278_471186_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273702
NZ_CP020039.1\|WP_079403491.1\|453250_453832_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_162500712.1\|450012_450204_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079403489.1\|450327_451065_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369778
NZ_CP020039.1\|WP_079407680.1\|456409_456631_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079403490.1\|451075_452488_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP020039.1\|WP_079403496.1\|461379_462168_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369778
NZ_CP020039.1\|WP_079403494.1\|459260_459923_+\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224996

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_053170869.1\|455323_456076_-\|DUF255-domain-containing-protein	gnl\|CDD\|239251	cd02953, DsbDgamma, DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.	2.51808e-15
NZ_CP020039.1\|WP_079403495.1\|460069_460408_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|163261	TIGR03433, padR_acidobact, transcriptional regulator, Acidobacterial, PadR-family. Members of this protein family are putative transcriptional regulators of the PadR family, as found in species of the Acidobacteria. This family of proteins has expanded greatly in this lineage, and where it regularly is found in the vicinity of a putative transporter protein [Regulatory functions, DNA interactions].	2.22175e-18
NZ_CP020039.1\|WP_079403499.1\|465582_466242_+\|HAD-family-hydrolase	gnl\|CDD\|319828	cd07526, HAD_BPGM_like, subfamily of beta-phosphoglucomutase-like family, similar to Escherichia coli 6-phosphogluconate phosphatase YieH. This subfamily includes Escherichia coli YieH/HAD3 an 6-phosphogluconate phosphatase, which can hydrolyzed purines and pyrimidines as secondary substrates. It belongs to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate, and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.82086e-55
NZ_CP020039.1\|WP_030387657.1\|452484_453216_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.2354e-73
NZ_CP020039.1\|WP_079403488.1\|448414_449245_-\|ammonia-dependent-NAD(+)-synthetase	gnl\|CDD\|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	2.82144e-166
NZ_CP020039.1\|WP_079407681.1\|466310_467501_-\|hypothetical-protein	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	3.1604e-15
NZ_CP020039.1\|WP_030387660.1\|454691_455327_-\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	8.04481e-43
NZ_CP020039.1\|WP_053170876.1\|453921_454695_-\|cytochrome-C-biogenesis-protein-CcdA	gnl\|CDD\|280792	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region. This family consists of the transmembrane (i.e. non-catalytic) region of Cytochrome C biogenesis proteins also known as disulphide interchange proteins. These proteins posses a protein disulphide isomerase like domain that is not found within the aligned region of this family.	2.14549e-41
NZ_CP020039.1\|WP_030387673.1\|468052_468643_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	9.96893e-16
NZ_CP020039.1\|WP_079403498.1\|463626_465528_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224926	COG2015, COG2015, Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP020039.1\|WP_079403500.1\|469278_471186_+\|hypothetical-protein	gnl\|CDD\|273702	TIGR01577, Uncharacterized_glycosyl_hydrolase_MJ1610, oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (1), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.	1.58616e-24
NZ_CP020039.1\|WP_079403496.1\|461379_462168_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369778	pfam08242, Methyltransf_12, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.64298e-16
NZ_CP020039.1\|WP_079403489.1\|450327_451065_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369778	pfam08242, Methyltransf_12, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.63465e-14
NZ_CP020039.1\|WP_079403490.1\|451075_452488_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.39236e-24
NZ_CP020039.1\|WP_079403497.1\|462543_463383_-\|dienelactone-hydrolase	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	8.84732e-12
NZ_CP020039.1\|WP_079403494.1\|459260_459923_+\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|224996	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only].	1.04506e-42

>NZ_CP020039.1|WP_079407680.1|456409_456631_-|hypothetical-protein
MHTVPSQGGKVTVRYGSRGVCLISAVPGRGFKTTTSQTDDDTLTVTFSGADHRSVITATIVPMAKASVRESSF
>NZ_CP020039.1|WP_053170869.1|455323_456076_-|DUF255-domain-containing-protein
MLRPVRTGRHAQPRSAPFLKARLPLVTAAVVAAGLCAACGSSSTQSVGSVSQASSGLPTQALEPAAPSASASTEASPSASASPSASASAAPSSSPTPSRARSSSAAPKPARTSAAPAPARIPGPGYDSSADAQKLIDAALSAAKADGRMVLLDFGANWCGNCKAADKVFAQSQTAAILGASYHLVKIDIGGNSSANSALLRKYSPSGGSYKMPVLIVVDPSGKVRTDTHATGNPALTAEGINAFLRKWAS
>NZ_CP020039.1|WP_030387660.1|454691_455327_-|TlpA-family-protein-disulfide-reductase
MRARGPRRAGVRTAALAGAGLAAAAAGCVFAALGTVAADGSRAEAAAGPATAVRAAAEATVIEPAARPAAPELSGEDLDGKPLATADLRGHVVVLNVWGSWCAPCRAEADDLDRLDRQTRDAGVRFLGINTRDPDRAAARSFVRAHGLGFPSLHDPTGALLLRFPPALLNPQAIPSTLVIDRRGRIAVSIGGAVTEDELRPLLTRVMEEAP
>NZ_CP020039.1|WP_053170876.1|453921_454695_-|cytochrome-C-biogenesis-protein-CcdA
MTAGAVLAADTPALLHGALAIAAPVAFLAGLVSFLSPCVLPLVPGYLSYVTSLSVSDLAEASGGRRSRMAAGALLFVLGFTAVLVSGGALFGYFGRTLLAHQEVVTRVLGVFTVLMGLSFMGLLPGFTQREFRSHRRPVLGLAGAPLLGAVFAVGWTPCIGPTLAAVQALAWSEASAARGALLMAAYCLGLGLPFVLAALAFRRALGAFGLVKRHYAWVLRIGGGLLVLVGVLLATGVWNDLVYRLQLWSADFTTAV
>NZ_CP020039.1|WP_079403491.1|453250_453832_-|hypothetical-protein
MNLSPRTKQSRTTRTAVALLCLAALTACGEHSAENSASAAPAAPAATSNFSENGVTVTLSVSDWHAPNGTLTAVFTPEEKGFHLYSTELPLTGIEGVGRPTAVAVTGALKAEGKLKAAADVRTISVPGVDAPVPVYPDGPVTTTLPIRADGNGDATVLLGYASCSTEQGCTIPVADRPVHLRITDEGPTFAAH
>NZ_CP020039.1|WP_030387657.1|452484_453216_-|response-regulator-transcription-factor
MPSVLVVEDDPSIRQSLIEVLAEHGYAVRSVGDGFGALREVTQTPVDAVVLDLGLPDLDGGDALRMIRGISSVPVLVATARDDETEIIKLLNAGADDYLVKPFSGGQLIARLSAVLRRTSHVPPTAGAHTGPGARSAPAAEPLRATTVGELVVDPGARTAYLAGRELHLTRREFDLLAFLAHHTGQVVSKRRLLTEVWREPYVDDQTVDVHLSSLRRKLGERAAAPRYLLTVRGVGIKLVAPR
>NZ_CP020039.1|WP_079403490.1|451075_452488_-|HAMP-domain-containing-histidine-kinase
MRRSLAGVALAVTSMVALSFLIPLGALVMSLVKEQSVTAAEQRAAALAPVLTLTTDPSALRESAAGLDQSEHLVVHLPDAQTLGDTQAPAKLLERAQQGRESISQKTPGGWICLQPVVLPGDRVAVIENFVPDEELTRGVRASWAVMLLLAVGLVGGSVLVADRLGAKVVRSSKKLAQASHTLGQGNLDTRVEPMGPKELRDAGVAFNAMAHRMTELLAIERELVADLSHRLRTPLTALHLASERMAGTPESARVEAAVHALETELQAIIAAARTPLAVGPMGHGMRSAEPSTPRPAAGAEPAAGCRSQAAEVVRRRTAFWAVLAEQQDRPCALEITQEPTAVSLSDDDIAAVVDALIGNVFSHTPAGTAFGVRVVRTAQAVELIVEDSGPGIPEPDRALSRGSSTGSSGLGLDIARRAAAVTGGSMRIGHGPRGGAHITVVFALAPSQSAGRGPRGSRRRTGWWPPRKR
>NZ_CP020039.1|WP_079403489.1|450327_451065_+|class-I-SAM-dependent-methyltransferase
MNREQISGIAHAGHPIKAPLDDDSVRSLLGYGAPRGDERLLDLGCGSAEWLLRALTAHPGLHAEGVDVSEQALELARRSAERLGVQDRLVLHRQEAADFVPAQAFDLVLSVGASHAFGGLLPTLAAARKHLAPGGRVLIGDGFWDRTPSPEAFELFGELDDLATTVDRVVADGWTPVHGHVSSRRELDDYEWSCWGSLASWALDRPGDPDAAEAFATATARRTEWLHSYRDSFGFLTLVLRPTSG
>NZ_CP020039.1|WP_162500712.1|450012_450204_+|hypothetical-protein
MFLPGEWTELKAPNLPLETVKLASHLVRPLGGHSIRAPFHRVLPTAPLHETFGQAWERRSPGR
>NZ_CP020039.1|WP_079403488.1|448414_449245_-|ammonia-dependent-NAD(+)-synthetase
MTDLASISLQQEIARDLQVSASFDARQEIERRVAFLADRLTSTGLHALVLGISGGVDSTTAGRLCQLAVERVRAAGHDATFFAMRLPYGAQADEKDAQLALEFIRADHVLTVDVKAASDAALEAALAGGTVFRDAHHQDFVHGNIKARQRMIAQYAVAGAHAGLVVGTDHAAEAVSGFFTKFGDGAADVVPLTGLTKRRVRALADELGAPSQLVHKTPTADLETLDPGKPDEDALGVTYDDIDDFLEGRPVDGAAFEAIVGRYRLTEHKRQLPIAP
>NZ_CP020039.1|WP_030387664.1|458335_459052_+|hypothetical-protein
MRTRTTTATTGLVTALAALLVLAGCSTPGEGRPAAVSSAASASVPPPSGGGAGFDGPRPQDQNLLAWTGDPNDAGHVTAQSAAGVGGRVTLVRIVLREQITWSNVWLGLAGIDPNAQLANCYLGVYDAKGALVATTADISPQLMTDAIAKPFALAKPFTAAPGTYFIALLLNGNWATNGLTLKSTGAGISVNAGLTPPNLRYSTLLTGQTSLPPTLNLAEQSTSTINTGWASQWYAIS
>NZ_CP020039.1|WP_079403494.1|459260_459923_+|NAD(P)-binding-domain-containing-protein
MKIGIIGAGNIGGNLTRRLTALGHEVSVANSRGPETLTALAEETGATAVTVTQAARGAELVVVTIPFKNVPDLPAGLFDGAAEGFVVIDTNNYYPRQRDGRIAGVEDEGLTESRWTERQLGHPVIKAFNGTYAQDILDRHRPAGAADRMALPVAGDDPAAKETVRALIEELGFDSVDAGGLDDSWRQQPDTPVYGLREGVDAVTKALAEASPVRPEAFRG
>NZ_CP020039.1|WP_079403495.1|460069_460408_+|PadR-family-transcriptional-regulator
MSDRAMQEPTLLLLTALADEPRHGYAIAREVELISGGRVKMRTGTLYGALERLLGQGLIEVHEEQIVDSRLRRTYSLTAEGRQSLAAEAQRIAATAREAARRLGISGGTATA
>NZ_CP020039.1|WP_079403496.1|461379_462168_-|class-I-SAM-dependent-methyltransferase
MATRKNLTANRESLVHKVRYAASRPNRIAPYLKRAARDRWLAFKHPDHVSYYRAVMASDTRRNPEAAVGSQTHERWLALGQMQFDYLIGHGLKPGARMLDIGCGNLRAGWRFIDYLDAGHYYGIDISPDILIAAKRTLTERGLQAKVPHLTITRNLTLDFLPDGYFDVVHAHSVFSHSPLDVIEECFAHVGRVLAPGGHFDFTFDRTTGAEHQVLREDFYYRTQTLVDLAAAHGLSARFMDDWEELGHGQSKIRITAAGAQV
>NZ_CP020039.1|WP_079403497.1|462543_463383_-|dienelactone-hydrolase
MADHDLSGFEKSTFTHDGATRRILRRGTGPAVIVMAEIPGITPKVIEFAEYVAAAGCTAVLPVLFGEPGRDPHPGAVGWPSAGRYMASSLWQVCVSREFTLLATGRGSRVVRWLRALAAAEHARCGGPGVGAVGMCLTGGFALAMATDERLLAPVLSQPSLPLACTPGRAGAIDISPEDLAVVRGRCEREGLQVLGLRFRGDRLSPGDRFAYLRRELGDAFVAVELDDGAANPQGALAPHSVLTEHLIDEPGQPTRQALDTVLELFRTRLLGEGPAAAG
>NZ_CP020039.1|WP_079403498.1|463626_465528_+|MBL-fold-metallo-hydrolase
MTDGPGRDASEAIGNAHRVAAGSEAFANRTDFDDATHGFVAALEPCVIRAEDGRVVWDGDAYAFLNGDRPDTVHPSLWRQSRLGALQGLFHVVDGVYQVRGLDLSNMTLVEGDRGVVVIDPLISEETAAAALALYRAHRGDRPVTGVLYTHSHADHFGGVKGVTSQAEVDAGRVPVLAPQGCVEHAVSENVYAGTAMARRAGYMYGAGLPKGPRGQVGAGLGQTTSTGRVTLIRPTLDITRTGQEETVDGVRIVFQLTPGTEAPAEFNLLLPDHRALCMAENATHTLHNLLTLRGALVRDPRAWAAYLTESIALFGDKCDVVFASHHWPVRGRERAMSYLAEQRDLYAYLHDQTLRLLNQGYTGAEIAETLRMPPALEAAWHTHGYYGSVSHNVKAVYQRYMGWFEGNPALLWQHPPEESARRYVEFMGGAAEVLRRARTSFEEGDYRWVAQVVDHVVFADPSNAQARELQADALEQLGYGAENGTWRNFYLTGAQELRGTSVGTPATAASPDVIAALSLEQLVDSLAVRIDGPRAWDADVVVRFILPGSEPLTLRLGNGVLTGVRGDNPAAGRPHAVVVLDEPLLRALLLGAVAPDELARHAGVSLDGDPALVAELFAYLDSPDPDFPIVTP
>NZ_CP020039.1|WP_079403499.1|465582_466242_+|HAD-family-hydrolase
MIKPIELVIFDCDGVLVDSERIAVPLQVALGAELGWPLTAVEVMERFIGRSTASIREDIVARVGDEAADTWHRLFEERHRAAVDTGLSAVEGLPEALGAITLPTCVASSGSHEKMRHTLGRTGLYEHFEGRIYSATEVRHGKPAPDLFLYAAQRMGVDPAACAVVEDSRPGVEAARAAGMRVFGYAGGLTPAERLEGTGTVVFHDMRELPRLITAGVGV
>NZ_CP020039.1|WP_079407681.1|466310_467501_-|hypothetical-protein
MRQARTLPAEEHLPPLPQFPENLEEALGASVIWTSPPITTQDLTTLTTGPGRAGRTPCRLPVRLRQALTARPRREHPDLGEVFTPGPQVAVAVARNARLNPLHLTDQANAWALEALKQPHLTHAARKTPEGRPAPAPLESVHQALRVLEVINRYSGGVNLTQIARETALPQLVLARAMEQLIRANLATPIAPDAYVAGNALVLADSATGEGRGHLRETLAWVRDAVGAAVYVARYTDGEVSITQYADGPATPVVEEWVDFRDAAHASAVGKALLTQLDYDERKDHLARHRPTRFTPHTLTGQQDLFHQLDHRPPNAPLLDLQEYAIGTVCAAVPITAGPNAECVALSIPVPDPGRLKQAARILQSEAAAVLLALIVAGSTPATARRTEDTLLSPTA
>NZ_CP020039.1|WP_030387673.1|468052_468643_-|sigma-70-family-RNA-polymerase-sigma-factor
MGERMSEGDFDPSGDQAVSSELAGVLPVDFTAFHSQQHRAYLRYAHLQLGNAKDAEEVVDDVFTFLLKVWRQALKEASLHGFAWAVLREHVERRLAALGRQVAMVETAWFAALRRSSRERLEMLESKLGLYAAIAGLSERQYDVVLLSFLLGNDSETVARMMGITPATVRSHIRGARRTLSRKLGVDWIPGEEKDQ
>NZ_CP020039.1|WP_079403500.1|469278_471186_+|hypothetical-protein
MALARTLLPVVLSLAVAGVPASLPDAAGRPADAAAVPYDGQPGHETALFGVKATNNAAAQEFTVDGTRLSRVSVWLGSGAATGTVTAQVRRVRTDPGSAIASATLDLASLGGAGAGWVEFPLDAAVTAGTVYYLFLQASTEESGPIAWYGTTRSVPGSLTSWNYDEAYWGGWHAATSRPAFHVNPADSERCGETEPCYVPTSALAARTSGLLANGVATEAVLPSFAVGASYVDGSNVLRLPSGRWRYLPAGASASAVVAADDPGAQAQIEESRAWLAAGRVPGTTDAQRAASQRALLSMRALLKPGGAFAAAWAPAWEYSWPRDGAFAAVAFAATGHDEEAYRILRYDARTQRADGTWEARTLLDGSGPPDGRKWQLDANGWVPWATWQWYRAAPAEGRDDRLRELYPMVRRAADYAARSLGPDGLPPASPDYWELDTTTTNIGTAAPLLAGLDAAADLAAGLGMAADAERWGDAARRLSAGIAASFAPLGYRRTVDGKHGRDSAVAFMAPPFNSAPAGLGEALDSTYRALLLPNGGVSPGNDPSFSWGSYAWTASTTFFALAWAGTGERAKAGRVLDWVLSKRNGLGELPETVNGAGLPSAVAPLGWTDALVVLTADALQGSALPTPAAARVGQ

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP020039_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_2

1782220-1782324

Orphan

Consensus_repeat	Method
TCAGCCTCGCCGGCGCTTGAGGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_2

>merge|NZ_CP020039|2|1782220-1782324|CRISPRCasFinder
TCAGCCTCGCCGGCGCTTGAGGCGCACTTTCAGCCTCGCCGGCGTTTGAGGCGCGGGGCCGGGGGCGGAGCCCCGGTCTTTCAGCCTCGCCGGCGTTTGAGGCGC

>NZ_CP020039|2|2|1782220-1782324|CRISPRCasFinder
TCAGCCTCGCCGGCGCTTGAGGCGC	ACTTTCAGCCTCGCCGGCGTTTGAGGCGCGGGGCCGGGGGCGGAGCCCCGGTCTT
TCAGCCTCGCCGGCGTTTGAGGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_052873974.1\|1789491_1790967_-\|rRNA-cytosine-C5-methyltransferase	unknown	unknown	gnl\|CDD\|237857
NZ_CP020039.1\|WP_107469946.1\|1786076_1787048_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_030388454.1\|1788881_1789340_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079404376.1\|1772956_1774570_-\|glucose-methanol-choline-oxidoreductase	unknown	unknown	gnl\|CDD\|235000
NZ_CP020039.1\|WP_159395570.1\|1774979_1775591_-\|SnoaL-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|226158
NZ_CP020039.1\|WP_030388458.1\|1783621_1784635_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|367868
NZ_CP020039.1\|WP_030012151.1\|1783274_1783496_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273429
NZ_CP020039.1\|WP_079404378.1\|1775945_1777592_-\|thiamine-pyrophosphate-binding-protein	unknown	unknown	gnl\|CDD\|223107
NZ_CP020039.1\|WP_079404383.1\|1785739_1786063_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_030388457.1\|1784759_1785446_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|235515
NZ_CP020039.1\|WP_078626570.1\|1778761_1779028_+\|UBP-type-zinc-finger-domain-containing-protein	unknown	unknown	gnl\|CDD\|366940
NZ_CP020039.1\|WP_079404380.1\|1780810_1781320_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079404375.1\|1772352_1772964_-\|thiamine-biosynthesis-protein-ThiJ	unknown	unknown	gnl\|CDD\|153228
NZ_CP020039.1\|WP_053169546.1\|1774582_1774966_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_CP020039.1\|WP_053169639.1\|1777634_1778459_-\|type-1-glutamine-amidotransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|153235
NZ_CP020039.1\|WP_079404377.1\|1775473_1775908_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_CP020039.1\|WP_079404379.1\|1779024_1780755_+\|response-regulator	unknown	unknown	gnl\|CDD\|273540
NZ_CP020039.1\|WP_079404385.1\|1787044_1788874_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283837
NZ_CP020039.1\|WP_079404382.1\|1782766_1783225_-\|guanine-specific-ribonuclease-N1-and-T1	unknown	unknown	gnl\|CDD\|238340
NZ_CP020039.1\|WP_030387229.1\|1791116_1792061_-\|methionyl-tRNA-formyltransferase	unknown	unknown	gnl\|CDD\|234567

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_052873974.1\|1789491_1790967_-\|rRNA-cytosine-C5-methyltransferase	gnl\|CDD\|237857	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB.	1.16771e-92
NZ_CP020039.1\|WP_079404376.1\|1772956_1774570_-\|glucose-methanol-choline-oxidoreductase	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	3.61759e-171
NZ_CP020039.1\|WP_159395570.1\|1774979_1775591_-\|SnoaL-like-domain-containing-protein	gnl\|CDD\|226158	COG3631, COG3631, Ketosteroid isomerase-related protein [General function prediction only].	9.01944e-07
NZ_CP020039.1\|WP_030388458.1\|1783621_1784635_-\|transcriptional-regulator	gnl\|CDD\|367868	pfam04198, Sugar-bind, Putative sugar-binding domain. This probable domain is found in bacterial transcriptional regulators such as DeoR and SorC. These proteins have an amino-terminal helix-turn-helix pfam00325 that binds to DNA. This domain is probably the ligand regulator binding region. SorC is regulated by sorbose and other members of this family are likely to be regulated by other sugar substrates.	1.77399e-72
NZ_CP020039.1\|WP_030012151.1\|1783274_1783496_-\|hypothetical-protein	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	3.19834e-05
NZ_CP020039.1\|WP_079404378.1\|1775945_1777592_-\|thiamine-pyrophosphate-binding-protein	gnl\|CDD\|223107	COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism].	6.97754e-116
NZ_CP020039.1\|WP_030388457.1\|1784759_1785446_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|235515	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated.	5.14846e-131
NZ_CP020039.1\|WP_078626570.1\|1778761_1779028_+\|UBP-type-zinc-finger-domain-containing-protein	gnl\|CDD\|366940	pfam02148, zf-UBP, Zn-finger in ubiquitin-hydrolases and other protein.	2.01857e-10
NZ_CP020039.1\|WP_079404375.1\|1772352_1772964_-\|thiamine-biosynthesis-protein-ThiJ	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	4.71278e-27
NZ_CP020039.1\|WP_053169546.1\|1774582_1774966_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	1.69528e-16
NZ_CP020039.1\|WP_053169639.1\|1777634_1778459_-\|type-1-glutamine-amidotransferase-domain-containing-protein	gnl\|CDD\|153235	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein. Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein (EcHsp31). This group includes EcHsp31 and Saccharomyces cerevisiae Ydr533c protein. EcHsp31 has chaperone activity. Ydr533c is upregulated in response to various stress conditions along with the heat shock family. EcHsp31 coordinates a metal ion using a 2-His-1-carboxylate motif present in various ions that use iron as a cofactor such as Carboxypeptidase A. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1 domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For EcHsp31, this Cys together with a different His and, an Asp (rather than a Glu) residue form a different catalytic triad from the typical GATase1 domain. For Ydr533c a catalytic triad forms from the conserved Cys together with a different His and Glu from that of the typical GATase1domain. Ydr533c protein and EcHsp31 are homodimers.	1.44359e-52
NZ_CP020039.1\|WP_079404377.1\|1775473_1775908_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	3.70598e-06
NZ_CP020039.1\|WP_079404379.1\|1779024_1780755_+\|response-regulator	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	1.86851e-74
NZ_CP020039.1\|WP_079404385.1\|1787044_1788874_-\|hypothetical-protein	gnl\|CDD\|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	5.60661e-28
NZ_CP020039.1\|WP_079404382.1\|1782766_1783225_-\|guanine-specific-ribonuclease-N1-and-T1	gnl\|CDD\|238340	cd00607, RNase_Sa, RNase_Sa. Ribonucleases first isolated from Streptomyces aureofaciens. In general, ribonucleases cleave phosphodiester bonds in RNA and are essential for both non-specific RNA degradation and for numerous forms of RNA processing. RNAse Sa is a guanylate specific endoribonuclease which belongs to the superfamily of microbial ribonucleases. Typical of this sub-family, the enzyme hydrolyses the phosphodiester bonds of RNA at the 3' oxygen end of guanosine residues to yield oligonucleotides with the guanosine-2',3'-cyclophosphate at the 3' end and the hydroxyl group at the 5' end. The terminal guanosine-2,3'-cyclophosphate is hydrolysed by guanyl RNAses to give guanosine-3'-phosphate.	5.61897e-42
NZ_CP020039.1\|WP_030387229.1\|1791116_1792061_-\|methionyl-tRNA-formyltransferase	gnl\|CDD\|234567	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed.	7.49553e-166

>NZ_CP020039.1|WP_079404380.1|1780810_1781320_+|hypothetical-protein
MITAEQNEQLRAWFAERLPVDVYESLDSVVVDREEITVVGVIPATEPVKEFRERTREQRMEVAREAESLYRRKVAWGVRAGEETTLFTHLAVPVMTRLRQSERQVLDTLVAGGVARSRADALAWCVRLVGRNTDEWLTELRDSLDKVQQVRSQGPDVAGSTDSMKSGSE
>NZ_CP020039.1|WP_079404379.1|1779024_1780755_+|response-regulator
MSAARESSAATTATTAAAAAERAEHRKPVILAVDDDPQVLRAVRRDLRSAYGDRYRVLGASSAADALKILDSLDERGHDPALFLVDQRMPDVTGVEFLLEAVSRFPDARRVLLTAYAETDAAITAINRVRLDYYLLKPWDPPHERLFPVLDDLLSDWLATYRPAYDGIIVAGHLVSPGTHAVRDFFTRNGQPFRFLNVERDPEALTLIAAQPEGALPLVRFPDGSVLSAPTDTQLAQRLGLATTASRPHYECVIVGAGPAGLAAGVYSASEGLSTLMLDSRAPGGQAGTSSLIENYLGFPSGLSGGDLTRRATIQASRFGAEILHPVEVVSLTRDDPAKILTLADGTEISAETVLLATGVSYNRLDAPGADRFEGAGLYYGAATTESSACISQHVFIVGGANSAGQAAVHFAKYAARVTILVRAASLDASMSRYLIDEIDRTPNIEVKVRTTVVRLDGEEHLERLTLHDADTGTDSEVPARFMFTFIGARPHTDWLAGVVERDEYGFVLTGSDLISNGGELPAEWSLERAPYPLETSVPGVFAAGDVRAHSVKRVASGVGEGAMAVSLIHRYRSMG
>NZ_CP020039.1|WP_078626570.1|1778761_1779028_+|UBP-type-zinc-finger-domain-containing-protein
MDLLCTHIDQIRPVKPTAVGCEECLAAGDTWVHLRMCLSCGHVGCCDSSRNRHATRHYRSTEHAIAASHEPGEDWAWCYADQLMLDPA
>NZ_CP020039.1|WP_053169639.1|1777634_1778459_-|type-1-glutamine-amidotransferase-domain-containing-protein
MSRKILVIVSEHGYWAEELIGPVSKFDERGYEVIFATPTGKRAHALPPSLDANYIDPPLGRSVTTEENARLGREFEQSSRLDSPLDIEAWVPERPYTSDEGYLPKLEQYHRDLDKLDADIAGYDAILIVGGSGPIADLANNERVHALILAFRKAGKVVAAECYGVACLAFARDWGDRRSIIWGKHVTGHCKEYDYKDGTGFLGTDFNMGPPPYPLEYILRDATGPRGAYHGNFGKPVSVIVDFPFVTGRSTPDSYLTGQKIVEVLEDGLTRYGW
>NZ_CP020039.1|WP_079404378.1|1775945_1777592_-|thiamine-pyrophosphate-binding-protein
MEATPGRERLIEQFKADGLHVMFGNPGTVEQGFLDAVDAAEDFTYVLALQETVAAGIADGYARATGGAALLQLHSGVGLGNGIGMLYQSLRGHTPLVVVAGDAGVRYDAMDAQMASDLVAMAKPVTKYATRVTDPRSVLRTVRRAVKIALTPPRGPVFVALPMDVLDELNSEPVLPATRVLTDVAPSPASVGRAAELLAAAERPIVLVGDGVALSGAQNELAAVAELLGADVYEVDSSEVNIAASHPLRRGQTGHMFGPHSKELVGDADGVLIVGTYVFPEVFPELESPFRAGAKVVHIDLNAYEIAKNHPVDLGLAADPRQALRALAGVLEQRLGPQQRAAAAARLDVRTRERVRQVRGARSAADDGTPMAVFLRTLAERTGGDLIVFDEALTTSPLVTRYLPAERPGDYHLTRGGSLGVGFPGAVGAKLARPERLVVGFAGDGGSMYTYQALWTAARHGIDAKFVVCNNRKYRLLDDNIAQYWRERDIPEHGFPGSFDLSHPEIDFAGLARSLGAGGMRVEKPDEAVAAVGRMLSHPGPFLVDIQI
>NZ_CP020039.1|WP_079404377.1|1775473_1775908_-|nuclear-transport-factor-2-family-protein
MPAERQLTEDAIRSFAENWYVALDQHLGPADVLALITEDLVFKVPEDTFLGHEGFGRWYAAVTHRFFDEVHTVTKVEPVIEGDRAVVRVLVNWQARIWDPPAARSMWLGFDADQTWAVVAGPDGPLIKQYTVNDLAPMPGSASL
>NZ_CP020039.1|WP_159395570.1|1774979_1775591_-|SnoaL-like-domain-containing-protein
MARLRRRPDLGRRRRSRRTADQAVHRQRPGPDARFRLALSAAPAKERAGEETMTEVTRERVHAAYAALGSGDRARILQYYSEDLRWLVPGNHPLAGWYESLDAFLELMGQTHKLTGGTFRMDIQAVLVGEDCSADVCRNVALRDGADEASGSPYERMDYPVFHFMRWQGGRIVEGRDGLFGDSATAFSQFWAPFAPDGTRRDR
>NZ_CP020039.1|WP_053169546.1|1774582_1774966_-|nuclear-transport-factor-2-family-protein
MDRHESHTEILRKYYEYANAGDWDRWCDLFADDQVMDEQLAGHIEGLDVLRSMMKGMGTMYRVFRNEPVHFVVDGEKAAAVSHLTAVSASGEPIEAEVMNFFRIVDGKIAYMANYHDTVPFQVLGQD
>NZ_CP020039.1|WP_079404376.1|1772956_1774570_-|glucose-methanol-choline-oxidoreductase
MAGEQAEEYDYVIVGSGTAGSVLADRLSEDPDVRVLVLEAGGPRIPPEVDDPSSWYKLLGGPVDWGYTSTPQPGLDGRRTYEPRGKAPGGSSNLYIMMHIRGHASDFDNWAYQGAAGWSYEDVLPYFALLEGQEDATAATTGTRGPQRITNAGLHGPNPVSRAFIDAAVELGHEEIADFNTDGPRRGLFGTGWHHIDVADGRRQGVLAAYLEPALRRRNLTLRTHAQSTRLLFDGDTCTGVEYVQLRAPAEIPGRTVRDGHSSPAQPGLHTVRARREVIVAAGAIESPKLLLLSGIGRPEQLREHGIEVTAALPGVGENFHNHVLTGLMAEVTQELPPPAQNLSESALFLSSQPGLPAPDLQIAFVHVPFDVIVGQDHPHTVSILPGVVRPVSRGWIKLASADPLAHPLINPNYLGDRWDLERMVQGVKVAREIFATSAFSPWYKQELQPGPGYVSDDDLRTFVKQKSESYHHQAGSCRMGIDDFSVVDPELRVHGVRNLRVVDASVMPAVPSGNCHTAIAMIAERAADFLKGASRV
>NZ_CP020039.1|WP_079404375.1|1772352_1772964_-|thiamine-biosynthesis-protein-ThiJ
MSDAVLRDGALSGTRIAVLVESDYYEPEIFYYQRRFAEEGAEVDFLTRLWGNDSITFTGHEYRAPFTATQSLEGLSDEELRRYAAFIVPSGMVADRLRYTEDVDVLAPATELLRRAFAEPTVLKGIICHGMWLASSIPDRIRGRKVVCHNNLIGDVRNMGGEYVDEDVVVDGDLVTGRTGAHHHLFARRIIELIAAGRGRGAG
>NZ_CP020039.1|WP_079404382.1|1782766_1783225_-|guanine-specific-ribonuclease-N1-and-T1
MIFRNVPRSLLRLLGALFLCAALVGAVGCGGQKAVPAPADAASASARTDARATAVPGWAKGMATVRADGLPQQARDVLALIDEGGPYPYRQDGTVFGNFEKALPAQKRGYYHEYTVRTPGERDRGARRIVTGEGGEFFYTDDHYETFKAVLR
>NZ_CP020039.1|WP_030012151.1|1783274_1783496_-|hypothetical-protein
MTKSAVPRRHLPSSPFKAPVEQPIRQFNVGDRVTHDEHGLGRVVGIEEGIAVLVDFGSVQKRILSPYTKMAAL
>NZ_CP020039.1|WP_030388458.1|1783621_1784635_-|transcriptional-regulator
MSAGRSALRMGPAELVQAAAMARRFYLEGKSKIQIAEEFGVSRFKVARVLETALERDLVRIEIRVPAELDAERSDALRARYGLRHAVVVESPADATEDAPDPENLGAVAADLLGELVNEGDVLGLAWGRSTIHMAASLHRLPQCTVVQLTGVYDAGTAERGSVEAVRRAAQVSGGDAHPIYAPMLLPDPATAAALRSQTGIARAFEYFDKVTVAAVSIGSWEPGISTVHDMLTDEERAHYASLGVAAEMSAHLFDAEGRRVGRDLGERCITVEADRLRRIPEVVAIAGGLRKASAIGAVLRSGLVTSLVTDTAVADYLLTESAPGLRPALDRADPDD
>NZ_CP020039.1|WP_030388457.1|1784759_1785446_-|ribulose-phosphate-3-epimerase
MAAQIYPSILSADFARLAEEAKAVEGADWLHVDVMDNHFVPNLTLGMPIVESLSRATDIPLDLHLMIENPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPIEQYEDILPELDMLLIMTVEPGFGGQPFLDIMLPKIRRTRELIAKHGLELWLQVDGGVSASTIERCAEAGADVFVAGSAVYGAVDPAAAVRTLREQAGAAIAAAPWACDH
>NZ_CP020039.1|WP_079404383.1|1785739_1786063_-|hypothetical-protein
MKRLKAFSVAAPLVLAVTVAACGGGPAKQATMHEEQAVERAEGIIRQAVDGMMTKPTLERTGPAIVGPCIAKDDSSSDDRLQVALFYKLTGVPGTEAGHLVLQARDA
>NZ_CP020039.1|WP_107469946.1|1786076_1787048_-|hypothetical-protein
MNPRRAVPAAALLAMMLMATACGAQGDGQKTGGTAPKQVTMNEQQAIDRAEEIIHQAVDGMSPRPTLERMGPAPVGACIARDDHGPDDRVQVTVAYKLTGVPGSEAQNLVRQARDAWLKQGYKHNSSGEVDWTSAFPTVYMRTGPDDFWMDAVTGVVDRAKGEGLASLSVTSPCFLPPGKSKALGATPAAPAAFEAPSPDDAATRRALAHSSRIYDALQVGSAPTQPGEGLSTVRDESGASVHHTWSTEPLPEGERAAVVERAQTFFRSAGWTVRRVPTAEGTPGVVAGHPGEHTVAQVAASTTGAVRIAVTTPATGPASAGA
>NZ_CP020039.1|WP_079404385.1|1787044_1788874_-|hypothetical-protein
MDYATLKAFKPSEFEEAADGYRTMGNSAQAAREHIENTVATGMRKSLKGEAADAAQKQLQALAKNFHYTQTECGVISTALNGFAYDMAAAKRKLEAAVSDARADGCTVNDDGSVAFPAGQKPGAEKASEGGTVTGGAGGSETSDALERQAANIHPNPNYGKAMAYANRIADALKEATDADAKWEPKIRALKADDDLTVSAGDWTDAASDAGGVRGAADGYLGTIKPPPKNDWPQDNANWWNGLTEEQREAYVSMHPASIGGLDGLPSAVRDDANRLVLAEQRAAKQVEYDGWLKKEPEHYKPYISPVTGREVKGAMVPTEEWKAWEEKRKKIEDGSKGMDAIQKRFDTYTSESSRPYLLGFDGKDMGRAIVSIGNPDTADNVVTYVPGTFAELKSIDGDIGRAERLQLRAEREDLAHSTASIVWLGYDAPQGIATDATETKWADNAKEPLGNFIQGIEEANHRENGVNQTLLGHSYGSLVVGETMSMHIDLPVDNAIMVGSPGVGVDHAKDLNISPDRVFAATSDHDLINLAPPTARDPLSPKAWWDSFDDHTIVHGTDPTTDDFGGQVFEVPDGKWPMEDWEMMPAHSQYWDERPLGSLAKIVTGGRP
>NZ_CP020039.1|WP_030388454.1|1788881_1789340_-|hypothetical-protein
MSWDEWEQIKAGAGDGQHVAMRLNQVPGDPGTGAPSAVTGGLQSSKKAWTTAGEGVGSLRPTLGTALTKLEDGQSGIGSTAGCLSAAAQKDVYDSWKKYAESVSERCGALQGVLDQVGRDVLTTDEGVQAEMGRLNAKYADTDAVGGQGKGR
>NZ_CP020039.1|WP_052873974.1|1789491_1790967_-|rRNA-cytosine-C5-methyltransferase
MSEQPRQPRRRPAPAGAGGKQAKPYRRPQKDPVRMLAFEVLRAVDERDAYANLVLPPLLKKARQDENFQARDAALATELVYGTLRRQGTYDAVIKACIDRPLREVDPPVLDVLSLGAHQLLGTRIPTHAAVSASVELARVVLGDGRAKFVNAVLRKIAAHDLDGWLERVAPPYEDDAEEHLAVYHSHPRWVVSALWDSLGGGRAGIEDLLEADNERPEVTLVARPGRSTPEELLEAVGEDSALPGRWSPYAVRMAEGGEPGALEAVRDGRAGVQDEGSQLVAMALAAAPVEGRDERWLDGCAGPGGKAALLAALAAQRGAFLLASEKQPHRARLVERSLAGNPGPYQVIAADGTRPAWLPGSFDRVLMDVPCSGLGALRRRPESRWRRRPEDLEGFAPLQRGLLREALSAVRVGGIVGYATCSPHLAETRVVVDDVLKGRGAGQSPVSAELIDARPFMSGVPALGDGPDVQLWPHLHGTDAMYLALLRRTA
>NZ_CP020039.1|WP_030387229.1|1791116_1792061_-|methionyl-tRNA-formyltransferase
MKLVFAGTPEVAVPALDALIASGRHEVAAVITRPDAPAGRGRRLVASPVAERAEEAGIEVLKPVRPRDPDFQARLREIAPDCCPVVAYGALIPKSALDIPKHGWVNLHFSLLPAWRGAAPVQQSIIAGDQVTGASTFRIEEGLDTGPVYGILTEEIRPTDTSGDLLTRLAFAGSGLLAATMDGIEDGTLRAVEQPHDGVSHAPKITVEDARIDWTAPAMRADRVVRGCTPAPGAWTVFRGERLKLISLGPVPDRTDLEPGALAPTKNNVYVGTGSHAVELLWVQPQGKKPMRAADWARGVRIAPGERLGGADVG

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Crispr_ID: NZ_CP020039_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_4

1897749-1897837

Orphan

Consensus_repeat	Method
CGGCAGCTGGCCGCCCTGGCCGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_4

>merge|NZ_CP020039|4|1897749-1897837|CRISPRCasFinder
CGGCAGCTGGCCGCCCTGGCCGCCGCCGAGATCGACCCGCCGACGAGCGGGGTGTGGACGGACGCGGCGCTGGCCGCCCTGGCCGCCGA

>NZ_CP020039|4|4|1897749-1897837|CRISPRCasFinder
CGGCAGCTGGCCGCCCTGGCCGCCG	CCGAGATCGACCCGCCGACGAGCGGGGTGTGGACGGAC
GCGGCGCTGGCCGCCCTGGCCGCCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_030387141.1\|1894333_1895761_-\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_CP020039.1\|WP_079404429.1\|1899986_1901192_-\|acetylornithine-transaminase	unknown	unknown	gnl\|CDD\|235112
NZ_CP020039.1\|WP_030387143.1\|1893078_1893630_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP020039.1\|WP_079404433.1\|1905150_1906596_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP020039.1\|WP_053704342.1\|1904540_1905119_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP020039.1\|WP_079404425.1\|1891537_1893082_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|184957
NZ_CP020039.1\|WP_079404430.1\|1901188_1902130_-\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|234869
NZ_CP020039.1\|WP_079404432.1\|1903280_1904309_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
NZ_CP020039.1\|WP_079404424.1\|1889992_1891468_-\|membrane-associated-oxidoreductase	unknown	unknown	unknown
NZ_CP020039.1\|WP_079407790.1\|1898683_1899370_+\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|226309
NZ_CP020039.1\|WP_078626398.1\|1887215_1887800_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP020039.1\|WP_079404426.1\|1893719_1894232_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380121
NZ_CP020039.1\|WP_079404431.1\|1902126_1903284_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	unknown	unknown	gnl\|CDD\|235441
NZ_CP020039.1\|WP_030387149.1\|1886671_1887178_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP020039.1\|WP_079404434.1\|1906594_1907515_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP020039.1\|WP_030765574.1\|1889349_1889979_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP020039.1\|WP_030010023.1\|1899442_1899979_-\|arginine-repressor	unknown	unknown	gnl\|CDD\|235116
NZ_CP020039.1\|WP_079404423.1\|1887873_1889055_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176544
NZ_CP020039.1\|WP_030387130.1\|1907572_1907770_+\|DUF1918-domain-containing-protein	unknown	unknown	gnl\|CDD\|378101
NZ_CP020039.1\|WP_079404427.1\|1895888_1897082_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_030387141.1\|1894333_1895761_-\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NZ_CP020039.1\|WP_079404429.1\|1899986_1901192_-\|acetylornithine-transaminase	gnl\|CDD\|235112	PRK03244, argD, acetylornithine transaminase.	0
NZ_CP020039.1\|WP_030387143.1\|1893078_1893630_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.16122e-06
NZ_CP020039.1\|WP_079404433.1\|1905150_1906596_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.22175e-96
NZ_CP020039.1\|WP_053704342.1\|1904540_1905119_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	5.20874e-21
NZ_CP020039.1\|WP_079404425.1\|1891537_1893082_-\|MFS-transporter	gnl\|CDD\|184957	PRK14995, PRK14995, SmvA family efflux MFS transporter.	1.02179e-103
NZ_CP020039.1\|WP_079404430.1\|1901188_1902130_-\|acetylglutamate-kinase	gnl\|CDD\|234869	PRK00942, PRK00942, acetylglutamate kinase; Provisional.	4.15265e-147
NZ_CP020039.1\|WP_079404432.1\|1903280_1904309_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	4.05381e-172
NZ_CP020039.1\|WP_079407790.1\|1898683_1899370_+\|L,D-transpeptidase-family-protein	gnl\|CDD\|226309	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown].	8.91104e-28
NZ_CP020039.1\|WP_078626398.1\|1887215_1887800_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	6.56149e-12
NZ_CP020039.1\|WP_079404426.1\|1893719_1894232_+\|hypothetical-protein	gnl\|CDD\|380121	pfam18143, HAD_SAK_2, HAD domain in Swiss Army Knife RNA repair proteins. Family of HAD domain phophoesterases observed in large eukaryotic proteins with predicted role in RNA repair, the so-called 'Swiss Army Knife' repair proteins. May be involved in phosphate group removal during RNA re-ligation.	0.000263981
NZ_CP020039.1\|WP_079404431.1\|1902126_1903284_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	gnl\|CDD\|235441	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ.	0
NZ_CP020039.1\|WP_030387149.1\|1886671_1887178_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.47906e-13
NZ_CP020039.1\|WP_079404434.1\|1906594_1907515_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.72739e-09
NZ_CP020039.1\|WP_030765574.1\|1889349_1889979_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	6.31665e-51
NZ_CP020039.1\|WP_030010023.1\|1899442_1899979_-\|arginine-repressor	gnl\|CDD\|235116	PRK03341, PRK03341, arginine repressor; Provisional.	2.33722e-85
NZ_CP020039.1\|WP_079404423.1\|1887873_1889055_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176544	cd08602, GDPD_ScGlpQ1_like, Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.	1.3419e-156
NZ_CP020039.1\|WP_030387130.1\|1907572_1907770_+\|DUF1918-domain-containing-protein	gnl\|CDD\|378101	pfam08940, DUF1918, Domain of unknown function (DUF1918). This domain, found in various hypothetical bacterial proteins, has no known function.	2.5138e-23
NZ_CP020039.1\|WP_079404427.1\|1895888_1897082_-\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0

>NZ_CP020039.1|WP_079404427.1|1895888_1897082_-|argininosuccinate-synthase
MTERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQGGEDLDVIRKRALDCGAVEAEVADASDEFANEYCLPAIKANALYMDRYPLVSALSRPAIVKHLVAAAKKHGATTVAHGCTGKGNDQVRFEAGIVALAPDLKCIAPVRDYAMTRDKAIAFCEEKQLPIATTKKSPYSIDQNVFGRAVETGFLEDIWNAPIEDIYEYTSNPALQREPDEVVISFKEGVPVAIDGKPVSVLQAIQQLNDRAGAQGIGRIDIVEDRLVGIKSREVYEAPGAIALITAHQELENVTVERELARYKRQVEQRWGEMVYDGLWFSPLKRALDGFINEANQHVTGDIRMTLHGGRAVVTGRKSDESLYDFNLATYDSGDTFDQSKAQGFIEIFGLSAKIAARRDLA
>NZ_CP020039.1|WP_030387141.1|1894333_1895761_-|argininosuccinate-lyase
MSSNKGDVRLWGGRFADGPSEALALLSASVHFDWRLAPYDIAGSRAHARVLHKAGLLTAEELDRMIAGLDRLEADVADGSFTGTVADEDVHTALERGLLERLGAELGGKLRAGRSRNDQVATLFRMYLRDHGRIIGGLIADLQDALVGLAETHHDVAMPGRTHLQHAQPVLFAHHVLAHVQSLSRDAERLRQWDTRTAVSPYGSGALAGSSLGLDPEQVAADLGFERGSVGNSIDGTASRDFVAEFAFITAMIGINLSRIAEEIIIWNTKEFSFVTLHDAFSTGSSIMPQKKNPDIAELARGKSGRLIGNLTGLLATLKALPLAYNRDLQEDKEPVFDSCDTLEVLLPAFTGMMATLTVNRERMEELAPAGFSLATDIAEWLVKQGVPFRVAHEVAGECVKVCEGEGIELDQLTDDQFAKISEHLTPEVRTVLNVKGALASRNGRGGTAPSAVAVQLTELKADLVIQHAWAAHKQ
>NZ_CP020039.1|WP_079404426.1|1893719_1894232_+|hypothetical-protein
MKPLLLIDVDGPLNPYAAKAQRRPEGYRTHRMRPTGWTEAERAKPLRVWLNHDHGAELLALADAYELVWATTWKDEANDWIGPHLGLPRLPFIDWPVMHGRAPRGTFWKTQYILEYAGERPFAWIDDDITAMDREYVERHHPAHALLRRIDERIGLVREDFDALAAWAAP
>NZ_CP020039.1|WP_030387143.1|1893078_1893630_-|TetR/AcrR-family-transcriptional-regulator
MAMDRDQVLRDAAALLSRKSTATMDEVARAAGIGRATLHRHFAGRDALVRALEDLGIREFEVAFDNARLDEGTAVEALGRLVAEAEPNAQLLAFLVTENQLFEGDEVNEGWARLDARVGALFRRGQQQGDIRIDLSPAWLTEALYALVGACAWAVMDGRVAAKDFQYMITELLLGGARRSVEK
>NZ_CP020039.1|WP_079404425.1|1891537_1893082_-|MFS-transporter
MSTTQQLNGPSGTETRSRGRWLALSVLVLAVLLVAVDATVLGLATPALSEDLKPSGTQLLWIGDIYSFVIAGLLVSMGSLGDRIGRKKLLLTGAAAFGAVSVLNAYATSPEMMIVARALLGVAGATLMPSTLALIRNIFHDPKERSLAIGIWGATASAGAAVGPVVGGALLQHFWWGSVFLINLPVMIALVVVGIKLLPESKNPVAGPWDLVSVGLSLVGVIGVVYAVKEVATHGVTWEVAVTAAAGAGALYAFVRRQFSLPSPLLDMRLFKHRGFSGAVLADLLTVFGLSGLVFFLSQFLQLVQGRDPLEAGLAELPAAIGAVVTGLIAGRYARRYSVRAIVAGGLGAIGLALGALTLIHKESGYPLLGAALLVVGLGAGFSFTVTADVILSSVPKEQAGSASAVSETAYELGAALGIALLGSIVTGVYQSFTAPASVAGPVADAAHESLGGAVEAAKVLDPHTAQVMVGAAQDAFVDGLRLASGVGAAVLLATAVAAWFLLRGQRLQDGLEH
>NZ_CP020039.1|WP_079404424.1|1889992_1891468_-|membrane-associated-oxidoreductase
MEINELTPAERRVWEAFPRGDGVDFRTAPEDSSADGADWGPGRTLRAEFLRAVLLGACPTVQGRVPGLKIKGAKIVGKLDLRYAVIDHPIRLRDCWFERKPLIYGAQLRALVLSDSTLPGLTASTVRVEVVLRLSCCRIAGPVRLQGAKISGGLFLQGAVIGPTGGEEADEPPLQLNHVEVDTDIIANDLIVHGQLRLNGSTVGGQIQLDRAQLLAPGAIALQAENLTVGTDLRGRRLKARGTVNLTGSRIPGQANLTRADLDNTGGTALRASSCAIGELWLRRCDQIRGDVNLRRSTIDLLHIDPEVWPARIAIDGLTYRTLAPHLPAEQRLPALEREESGYLTYAYEQLTAAYRTAGDETAARTVQLAKLRRHRGTLPRPARVWGLLQDATVGYGFRPLRAAGWLLALLMTGTLAYGFDPPRALKAGEAPDFNALFYTIDLMVPIVSFGQEAAFAPGGWYQWLSYLLIVTGWILATTTAAGISRSLQRQ
>NZ_CP020039.1|WP_030765574.1|1889349_1889979_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MRMMFRTRVEGIENIPGSGPVILAGNHLTFIDSMILPLVCDRTVHFIGKDEYVTGKGIKGRAMAWFFTGSGMIPVDRDGANGGVAALMTGRRILEEGKIFGIYPEGTRSPDGRLYRGRTGIARLTLMTGAPVVPFAMIGTDKLQPGGAGMPRPGRVTVRFGEPMEFSRYEGMDRDRYVLRAVTDSVMAEVMRLSGQEYVDMYATKAKAA
>NZ_CP020039.1|WP_079404423.1|1887873_1889055_-|glycerophosphodiester-phosphodiesterase
MTQGGAARRTVLGAAVLAAGTGITGLAAGSASAAGDGHGDGHGGGYGGFRDLPYPTVIGHRGASGYRPEHTLGSYRLALDLGADVIEQDLVPTRDGQLVCRHENEIGGTTDVADHPEFASRRTTKTVDGVSVTGWFTEDFTLAELRTLRAKERIPAVRQRNTLYDGQWAVPTFEEVLRWADREGRRRGRRVWLHVETKHPTYFRGLGLGLEEPLAKLLRRYGRDGRNAAVFLQSFEPSSIQRLSRLVSAPRVVLLSAAGTRPWDFEVAKDPRTVADLVKPEGLKWIAGFAQGIGPTMDLILPRDAAGGLGAPTTLVKDAHARGLLLHPYTARNENSFLPAEYRKGTDPTAYGNALAALRTYFEQGIDGIFTDNPDTGLLAAEAFRPGRRPVNR
>NZ_CP020039.1|WP_078626398.1|1887215_1887800_-|sigma-70-family-RNA-polymerase-sigma-factor
MDLLKAEYLDKLGPLLSAEAAAEAPGAGVDAADLEQAVWVRLLESGRRAPDPAEPAEPARWLRRAVRAEARLARRRARREVPYDHRRTAGDGHRRPSADGGPPAGTAAGAAPEDALMHGEENRALRSAVARLPGRCPELMKALLSPRDLTYREIAGELGISQGSLGPVRSRCLGCLRRMLAAEVAAPGLRGKER
>NZ_CP020039.1|WP_030387149.1|1886671_1887178_-|GNAT-family-N-acetyltransferase
MGMSVTISAAAAEDAEQIFKLQYLAFQREAELYGNYLIQPLTQSLDSLKGELATDTVLVARLGDEIVGTVRGNVDEDGTAKIAKLCVHPRLQGHGLGARLLRAVEEALASPGTTNRFRLHTGHKSESNLRLYRKAGYVQVGGRTASDGVQLVILEKEAKDPTDFTVSA
>NZ_CP020039.1|WP_079407790.1|1898683_1899370_+|L,D-transpeptidase-family-protein
MRTALVTGVTLVAALLPQAPAPLPDRLADTGGGSQLITAVAPAPGSTTGRVIWWERWAGRWHESGSAPARFGANGLTDGATRTQGTNTTPTGLYELPYAFGIRRAPVGTGHAYRRVSADSWWCQDNASAQYNRWVEPLPADCAPGEAEHLVTYEKQYAHALVIGFNYDRPVRGRGAGIFLHVNGKGATAGCVSVPERAMRAILRWADPGRRPHIAIGTESGDLAVTRY
>NZ_CP020039.1|WP_030010023.1|1899442_1899979_-|arginine-repressor
MSQAQDNEQGGQAVPQTRTARHRRIVDILNRQPVRSQSQLAKLLADDGLSVTQATLSRDLDELGAVKIRNTGGELIYAVPSEGGFRTPQAPLGESAKEERMRRLSGELLISAEASANLVVLRTPPGAAQFLASAIDQAELRAILGTIAGDDTLMLISRDPAGGQALADHLLRLAQKES
>NZ_CP020039.1|WP_079404429.1|1899986_1901192_-|acetylornithine-transaminase
MTKGTGNQEYGARWQAALTDNYGTPAVALVRGEGAQVWDADGKQYTDFVGGIAVNALGHAHPAIVAAVTEQVSTLGHVSNLFISEPVVALGERLLQLFGRPGKVFFCNSGAESIEAAFKIGRLTGRTHMVATDGGFHGRTMGALALTGQPKKQEPFRPLPGDVTHVPFGDVEALRAAVTEETALVVIEPIQGENGVVVPPAGYLTAAREITRATGTLLVLDEVQTGIGRCGQWFEHQAHEDVEPDIVTLAKGLGGGLPIGAVAAFGPVADLLRPGQHGTTFGGNPVACAAGLAVIDTIATGGLLDQVKARGERLRSGIEATGHSLVSHVRGAGLLLGIVLTEPLAARVQQAAQDAGFLVNAPAPDVVRLMPPYVLTEAEADAFVRALPGILDAAGGDGSGE
>NZ_CP020039.1|WP_079404430.1|1901188_1902130_-|acetylglutamate-kinase
MSDEKAGQPGTSGTARKHTALPKAQILIEALPWLTRHNGKVVVIKFGGNAMIDEDLKAAFAQDVVFLRQAGLKPVVVHGGGPQINAQLDKQGLVSEFKAGLRVTTPEAMDVVRMVLAGHVQRELVGLLNQHGPLAVGMTGEDARTIIATKHSPQIGGESIDIGRVGEITSIDTGAIEALLADGRIPVISSIAGSADDHHVYNVNADTAAAALAAALGAETLMVLTDVEGLYADWPHSDEVISKLTVSELEKLLPDLSSGMVPKMEGCLHAVRNGVNTARVLDGRVQHSILLEIFTDSGIGTMVVPDHQPGGTE
>NZ_CP020039.1|WP_079404431.1|1902126_1903284_-|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ
MSVTAAQGFTAAGIAAGIKANGNPDLALVVNNGPRLAAAGVFTSNRVKAAPVHWSEQVLRGGTVSAVVLNSGGANACTGPKGFQDTHATAEKVAQALGGDFNAGEIAVASTGLIGVLLPMDKLLPGVETAAAALSADGGEDAAIAIKTTDTVHKTATVSRAGWTVGGMAKGAGMLAPGLATMLVVITTDADLDSATLDKALRAATRTTFDRVDSDGCMSTNDTVLLLASGASGQVPAYEDFAEAVRTVCDDLARQLIGDAEGASKDIRIEVIGAASEDDAVEVGRSIARNNLLKCAIHGEDPNWGRVLSAIGTTKAGFDPDRLNVAINGVWVCRNGSVGEDRDLVSMKDREVRITADLANGAESAVIWANDLTAEYVHENSAYSS
>NZ_CP020039.1|WP_079404432.1|1903280_1904309_-|N-acetyl-gamma-glutamyl-phosphate-reductase
MVVRVAVAGASGYAGGEALRLLLSHPEVEIGALTGNSNAGQLLGSLQPHLVPLAGRTLEATTPEVLAGHDVVFLALPHGQSAAVAAQLGDEVLVVDMGADHRLKDSADWDAFYGAPHAGTWPYGLPELPGAREALTGARRIAVPGCFPTAVSLALFPAYQGGFAEPEAVIVAATGTSGAGKALKPHLLGAEVMGSVTPYGVGGGHRHTPEMVQNLSPLAGERVSVSFTPTLVPMARGILATCSAKALPGTTAESLRAAYEKAYADEPFVHLLPEGQMPSTKSVHGSNAVHVQVAYDESARRIIAISAIDNLTKGTAGGAVQSMNIALGLPEQLGLSTIGVAP
>NZ_CP020039.1|WP_053704342.1|1904540_1905119_-|histidine-phosphatase-family-protein
MHVRVSLVAAARSSSLLAERFDDDRPLDGAGWRAVESAARGLVPLGSAELRYCSPTPRSRATGEALGYAPLAQPALRECDMGRWRGLTLAEVAAHEPGAVELWLSDPRSAPHGGESLLAFISRVGGWLDTRPADDGGAIVAVAEPSVVRAALVYALKAPPLTYWNVDVRPLSTMTLTGSSGRWYLSLQPAPA
>NZ_CP020039.1|WP_079404433.1|1905150_1906596_-|PLP-dependent-aminotransferase-family-protein
MYERSSVADLAESLRSELNRYSIGGKLPSSRALVERYRVSPVTVSRALAQLAAEGLVVTRPGAGVFRAAPRTAAPAAGDTSWQEVALSAEGAGDIVPRSVDATGVLGSLAAPPPGVIELNGGYLHPSLQPERAMAAALARAGRRPGAWGRPPLEGLPELRDWFAREIGGALVAADVLITAGGQSALATALRALAPPGAPILVESPTYPGLLAIARASGCRPVPVPVDAEGVRPELLAAAFEATGARVFVCQPLFQNPTGAVLAPGRRAEVLRIARAAGAFVVEDDYARALAHEDAGPLPATLAAEDADGVVVHVRSLTKSTSPSLRVGALAARGPVVDRLRAIQIVDSFFVPRPLQEAALELVGAPAWPRHLRTVAAELRHRREVLAGALRRELPALELPHLPSGGYQLWVRPAGGGDDTAFAAAALRAGVAVAPGRPYFCAEPPGPYVRLSFAGVAGPGELVEAARRLRTGLAEGLGPDA
>NZ_CP020039.1|WP_079404434.1|1906594_1907515_+|DMT-family-transporter
MTAQNSATLPTTIAVKNPVRRGTALALLGVVAFSLTFPATAWGLESFGPWSLVALRSALAAAIAGAFLLARRVPLPAREHWAGLAVIAAGVVVGFPMLTTLALTTSTTSHAAVVVGLLPLTTAALSAVRTGARPSRAFWAAALAGAAVVLAFVAWDGTLAQSGGALSAGDAYLFAALLVCAAGYTEGGRLARVLSGWQVIGWALVLCLPLSLAGSAAGLAYEPVHLGFHGLAGLIWAAAGSTFLGLYVWYRGMAEIGAPRASQLQLAQPLLTLVWSVALLGEHLSPAAPVAACAVLVCIAVTQRVK
>NZ_CP020039.1|WP_030387130.1|1907572_1907770_+|DUF1918-domain-containing-protein
MRATEGDQLVQHGRIVGQHDKVGEITQVLGENGTPPYRVRFQDGHEALMAPGPDCTVRHPAEPPH

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Crispr_ID: NZ_CP020039_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_3

1897452-1897543

Orphan

Consensus_repeat	Method
CGGCAGCTGGCCGCCCTGGCCGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_3

>merge|NZ_CP020039|3|1897452-1897543|CRISPRCasFinder
CGGCCGCTGCCCGAGCTCGTCGCGATCCGCTGCGCGGACTGGGTGCCGGCCGTGCGCGAGCAGGCCCGGCAGGTGCTGGCCGCGGCCCTCGC

>NZ_CP020039|3|3|1897452-1897543|CRISPRCasFinder
CGGCCGCTGCCCGAGCTCGTCGCGA	TCCGCTGCGCGGACTGGGTGCCGGCCGTGCGCGAGCAGGCC
CGGCAGGTGCTGGCCGCGGCCCTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_030387141.1\|1894333_1895761_-\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_CP020039.1\|WP_079404429.1\|1899986_1901192_-\|acetylornithine-transaminase	unknown	unknown	gnl\|CDD\|235112
NZ_CP020039.1\|WP_030387143.1\|1893078_1893630_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP020039.1\|WP_079404433.1\|1905150_1906596_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP020039.1\|WP_053704342.1\|1904540_1905119_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP020039.1\|WP_079404425.1\|1891537_1893082_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|184957
NZ_CP020039.1\|WP_079404430.1\|1901188_1902130_-\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|234869
NZ_CP020039.1\|WP_079404432.1\|1903280_1904309_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
NZ_CP020039.1\|WP_079404424.1\|1889992_1891468_-\|membrane-associated-oxidoreductase	unknown	unknown	unknown
NZ_CP020039.1\|WP_079407790.1\|1898683_1899370_+\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|226309
NZ_CP020039.1\|WP_078626398.1\|1887215_1887800_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP020039.1\|WP_079404426.1\|1893719_1894232_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380121
NZ_CP020039.1\|WP_079404431.1\|1902126_1903284_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	unknown	unknown	gnl\|CDD\|235441
NZ_CP020039.1\|WP_030387149.1\|1886671_1887178_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP020039.1\|WP_079404434.1\|1906594_1907515_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP020039.1\|WP_030765574.1\|1889349_1889979_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP020039.1\|WP_030010023.1\|1899442_1899979_-\|arginine-repressor	unknown	unknown	gnl\|CDD\|235116
NZ_CP020039.1\|WP_079404423.1\|1887873_1889055_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176544
NZ_CP020039.1\|WP_030387130.1\|1907572_1907770_+\|DUF1918-domain-containing-protein	unknown	unknown	gnl\|CDD\|378101
NZ_CP020039.1\|WP_079404427.1\|1895888_1897082_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_030387141.1\|1894333_1895761_-\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NZ_CP020039.1\|WP_079404429.1\|1899986_1901192_-\|acetylornithine-transaminase	gnl\|CDD\|235112	PRK03244, argD, acetylornithine transaminase.	0
NZ_CP020039.1\|WP_030387143.1\|1893078_1893630_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.16122e-06
NZ_CP020039.1\|WP_079404433.1\|1905150_1906596_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.22175e-96
NZ_CP020039.1\|WP_053704342.1\|1904540_1905119_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	5.20874e-21
NZ_CP020039.1\|WP_079404425.1\|1891537_1893082_-\|MFS-transporter	gnl\|CDD\|184957	PRK14995, PRK14995, SmvA family efflux MFS transporter.	1.02179e-103
NZ_CP020039.1\|WP_079404430.1\|1901188_1902130_-\|acetylglutamate-kinase	gnl\|CDD\|234869	PRK00942, PRK00942, acetylglutamate kinase; Provisional.	4.15265e-147
NZ_CP020039.1\|WP_079404432.1\|1903280_1904309_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	4.05381e-172
NZ_CP020039.1\|WP_079407790.1\|1898683_1899370_+\|L,D-transpeptidase-family-protein	gnl\|CDD\|226309	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown].	8.91104e-28
NZ_CP020039.1\|WP_078626398.1\|1887215_1887800_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	6.56149e-12
NZ_CP020039.1\|WP_079404426.1\|1893719_1894232_+\|hypothetical-protein	gnl\|CDD\|380121	pfam18143, HAD_SAK_2, HAD domain in Swiss Army Knife RNA repair proteins. Family of HAD domain phophoesterases observed in large eukaryotic proteins with predicted role in RNA repair, the so-called 'Swiss Army Knife' repair proteins. May be involved in phosphate group removal during RNA re-ligation.	0.000263981
NZ_CP020039.1\|WP_079404431.1\|1902126_1903284_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	gnl\|CDD\|235441	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ.	0
NZ_CP020039.1\|WP_030387149.1\|1886671_1887178_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.47906e-13
NZ_CP020039.1\|WP_079404434.1\|1906594_1907515_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.72739e-09
NZ_CP020039.1\|WP_030765574.1\|1889349_1889979_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	6.31665e-51
NZ_CP020039.1\|WP_030010023.1\|1899442_1899979_-\|arginine-repressor	gnl\|CDD\|235116	PRK03341, PRK03341, arginine repressor; Provisional.	2.33722e-85
NZ_CP020039.1\|WP_079404423.1\|1887873_1889055_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176544	cd08602, GDPD_ScGlpQ1_like, Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.	1.3419e-156
NZ_CP020039.1\|WP_030387130.1\|1907572_1907770_+\|DUF1918-domain-containing-protein	gnl\|CDD\|378101	pfam08940, DUF1918, Domain of unknown function (DUF1918). This domain, found in various hypothetical bacterial proteins, has no known function.	2.5138e-23
NZ_CP020039.1\|WP_079404427.1\|1895888_1897082_-\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0

>NZ_CP020039.1|WP_079404427.1|1895888_1897082_-|argininosuccinate-synthase
MTERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQGGEDLDVIRKRALDCGAVEAEVADASDEFANEYCLPAIKANALYMDRYPLVSALSRPAIVKHLVAAAKKHGATTVAHGCTGKGNDQVRFEAGIVALAPDLKCIAPVRDYAMTRDKAIAFCEEKQLPIATTKKSPYSIDQNVFGRAVETGFLEDIWNAPIEDIYEYTSNPALQREPDEVVISFKEGVPVAIDGKPVSVLQAIQQLNDRAGAQGIGRIDIVEDRLVGIKSREVYEAPGAIALITAHQELENVTVERELARYKRQVEQRWGEMVYDGLWFSPLKRALDGFINEANQHVTGDIRMTLHGGRAVVTGRKSDESLYDFNLATYDSGDTFDQSKAQGFIEIFGLSAKIAARRDLA
>NZ_CP020039.1|WP_030387141.1|1894333_1895761_-|argininosuccinate-lyase
MSSNKGDVRLWGGRFADGPSEALALLSASVHFDWRLAPYDIAGSRAHARVLHKAGLLTAEELDRMIAGLDRLEADVADGSFTGTVADEDVHTALERGLLERLGAELGGKLRAGRSRNDQVATLFRMYLRDHGRIIGGLIADLQDALVGLAETHHDVAMPGRTHLQHAQPVLFAHHVLAHVQSLSRDAERLRQWDTRTAVSPYGSGALAGSSLGLDPEQVAADLGFERGSVGNSIDGTASRDFVAEFAFITAMIGINLSRIAEEIIIWNTKEFSFVTLHDAFSTGSSIMPQKKNPDIAELARGKSGRLIGNLTGLLATLKALPLAYNRDLQEDKEPVFDSCDTLEVLLPAFTGMMATLTVNRERMEELAPAGFSLATDIAEWLVKQGVPFRVAHEVAGECVKVCEGEGIELDQLTDDQFAKISEHLTPEVRTVLNVKGALASRNGRGGTAPSAVAVQLTELKADLVIQHAWAAHKQ
>NZ_CP020039.1|WP_079404426.1|1893719_1894232_+|hypothetical-protein
MKPLLLIDVDGPLNPYAAKAQRRPEGYRTHRMRPTGWTEAERAKPLRVWLNHDHGAELLALADAYELVWATTWKDEANDWIGPHLGLPRLPFIDWPVMHGRAPRGTFWKTQYILEYAGERPFAWIDDDITAMDREYVERHHPAHALLRRIDERIGLVREDFDALAAWAAP
>NZ_CP020039.1|WP_030387143.1|1893078_1893630_-|TetR/AcrR-family-transcriptional-regulator
MAMDRDQVLRDAAALLSRKSTATMDEVARAAGIGRATLHRHFAGRDALVRALEDLGIREFEVAFDNARLDEGTAVEALGRLVAEAEPNAQLLAFLVTENQLFEGDEVNEGWARLDARVGALFRRGQQQGDIRIDLSPAWLTEALYALVGACAWAVMDGRVAAKDFQYMITELLLGGARRSVEK
>NZ_CP020039.1|WP_079404425.1|1891537_1893082_-|MFS-transporter
MSTTQQLNGPSGTETRSRGRWLALSVLVLAVLLVAVDATVLGLATPALSEDLKPSGTQLLWIGDIYSFVIAGLLVSMGSLGDRIGRKKLLLTGAAAFGAVSVLNAYATSPEMMIVARALLGVAGATLMPSTLALIRNIFHDPKERSLAIGIWGATASAGAAVGPVVGGALLQHFWWGSVFLINLPVMIALVVVGIKLLPESKNPVAGPWDLVSVGLSLVGVIGVVYAVKEVATHGVTWEVAVTAAAGAGALYAFVRRQFSLPSPLLDMRLFKHRGFSGAVLADLLTVFGLSGLVFFLSQFLQLVQGRDPLEAGLAELPAAIGAVVTGLIAGRYARRYSVRAIVAGGLGAIGLALGALTLIHKESGYPLLGAALLVVGLGAGFSFTVTADVILSSVPKEQAGSASAVSETAYELGAALGIALLGSIVTGVYQSFTAPASVAGPVADAAHESLGGAVEAAKVLDPHTAQVMVGAAQDAFVDGLRLASGVGAAVLLATAVAAWFLLRGQRLQDGLEH
>NZ_CP020039.1|WP_079404424.1|1889992_1891468_-|membrane-associated-oxidoreductase
MEINELTPAERRVWEAFPRGDGVDFRTAPEDSSADGADWGPGRTLRAEFLRAVLLGACPTVQGRVPGLKIKGAKIVGKLDLRYAVIDHPIRLRDCWFERKPLIYGAQLRALVLSDSTLPGLTASTVRVEVVLRLSCCRIAGPVRLQGAKISGGLFLQGAVIGPTGGEEADEPPLQLNHVEVDTDIIANDLIVHGQLRLNGSTVGGQIQLDRAQLLAPGAIALQAENLTVGTDLRGRRLKARGTVNLTGSRIPGQANLTRADLDNTGGTALRASSCAIGELWLRRCDQIRGDVNLRRSTIDLLHIDPEVWPARIAIDGLTYRTLAPHLPAEQRLPALEREESGYLTYAYEQLTAAYRTAGDETAARTVQLAKLRRHRGTLPRPARVWGLLQDATVGYGFRPLRAAGWLLALLMTGTLAYGFDPPRALKAGEAPDFNALFYTIDLMVPIVSFGQEAAFAPGGWYQWLSYLLIVTGWILATTTAAGISRSLQRQ
>NZ_CP020039.1|WP_030765574.1|1889349_1889979_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MRMMFRTRVEGIENIPGSGPVILAGNHLTFIDSMILPLVCDRTVHFIGKDEYVTGKGIKGRAMAWFFTGSGMIPVDRDGANGGVAALMTGRRILEEGKIFGIYPEGTRSPDGRLYRGRTGIARLTLMTGAPVVPFAMIGTDKLQPGGAGMPRPGRVTVRFGEPMEFSRYEGMDRDRYVLRAVTDSVMAEVMRLSGQEYVDMYATKAKAA
>NZ_CP020039.1|WP_079404423.1|1887873_1889055_-|glycerophosphodiester-phosphodiesterase
MTQGGAARRTVLGAAVLAAGTGITGLAAGSASAAGDGHGDGHGGGYGGFRDLPYPTVIGHRGASGYRPEHTLGSYRLALDLGADVIEQDLVPTRDGQLVCRHENEIGGTTDVADHPEFASRRTTKTVDGVSVTGWFTEDFTLAELRTLRAKERIPAVRQRNTLYDGQWAVPTFEEVLRWADREGRRRGRRVWLHVETKHPTYFRGLGLGLEEPLAKLLRRYGRDGRNAAVFLQSFEPSSIQRLSRLVSAPRVVLLSAAGTRPWDFEVAKDPRTVADLVKPEGLKWIAGFAQGIGPTMDLILPRDAAGGLGAPTTLVKDAHARGLLLHPYTARNENSFLPAEYRKGTDPTAYGNALAALRTYFEQGIDGIFTDNPDTGLLAAEAFRPGRRPVNR
>NZ_CP020039.1|WP_078626398.1|1887215_1887800_-|sigma-70-family-RNA-polymerase-sigma-factor
MDLLKAEYLDKLGPLLSAEAAAEAPGAGVDAADLEQAVWVRLLESGRRAPDPAEPAEPARWLRRAVRAEARLARRRARREVPYDHRRTAGDGHRRPSADGGPPAGTAAGAAPEDALMHGEENRALRSAVARLPGRCPELMKALLSPRDLTYREIAGELGISQGSLGPVRSRCLGCLRRMLAAEVAAPGLRGKER
>NZ_CP020039.1|WP_030387149.1|1886671_1887178_-|GNAT-family-N-acetyltransferase
MGMSVTISAAAAEDAEQIFKLQYLAFQREAELYGNYLIQPLTQSLDSLKGELATDTVLVARLGDEIVGTVRGNVDEDGTAKIAKLCVHPRLQGHGLGARLLRAVEEALASPGTTNRFRLHTGHKSESNLRLYRKAGYVQVGGRTASDGVQLVILEKEAKDPTDFTVSA
>NZ_CP020039.1|WP_079407790.1|1898683_1899370_+|L,D-transpeptidase-family-protein
MRTALVTGVTLVAALLPQAPAPLPDRLADTGGGSQLITAVAPAPGSTTGRVIWWERWAGRWHESGSAPARFGANGLTDGATRTQGTNTTPTGLYELPYAFGIRRAPVGTGHAYRRVSADSWWCQDNASAQYNRWVEPLPADCAPGEAEHLVTYEKQYAHALVIGFNYDRPVRGRGAGIFLHVNGKGATAGCVSVPERAMRAILRWADPGRRPHIAIGTESGDLAVTRY
>NZ_CP020039.1|WP_030010023.1|1899442_1899979_-|arginine-repressor
MSQAQDNEQGGQAVPQTRTARHRRIVDILNRQPVRSQSQLAKLLADDGLSVTQATLSRDLDELGAVKIRNTGGELIYAVPSEGGFRTPQAPLGESAKEERMRRLSGELLISAEASANLVVLRTPPGAAQFLASAIDQAELRAILGTIAGDDTLMLISRDPAGGQALADHLLRLAQKES
>NZ_CP020039.1|WP_079404429.1|1899986_1901192_-|acetylornithine-transaminase
MTKGTGNQEYGARWQAALTDNYGTPAVALVRGEGAQVWDADGKQYTDFVGGIAVNALGHAHPAIVAAVTEQVSTLGHVSNLFISEPVVALGERLLQLFGRPGKVFFCNSGAESIEAAFKIGRLTGRTHMVATDGGFHGRTMGALALTGQPKKQEPFRPLPGDVTHVPFGDVEALRAAVTEETALVVIEPIQGENGVVVPPAGYLTAAREITRATGTLLVLDEVQTGIGRCGQWFEHQAHEDVEPDIVTLAKGLGGGLPIGAVAAFGPVADLLRPGQHGTTFGGNPVACAAGLAVIDTIATGGLLDQVKARGERLRSGIEATGHSLVSHVRGAGLLLGIVLTEPLAARVQQAAQDAGFLVNAPAPDVVRLMPPYVLTEAEADAFVRALPGILDAAGGDGSGE
>NZ_CP020039.1|WP_079404430.1|1901188_1902130_-|acetylglutamate-kinase
MSDEKAGQPGTSGTARKHTALPKAQILIEALPWLTRHNGKVVVIKFGGNAMIDEDLKAAFAQDVVFLRQAGLKPVVVHGGGPQINAQLDKQGLVSEFKAGLRVTTPEAMDVVRMVLAGHVQRELVGLLNQHGPLAVGMTGEDARTIIATKHSPQIGGESIDIGRVGEITSIDTGAIEALLADGRIPVISSIAGSADDHHVYNVNADTAAAALAAALGAETLMVLTDVEGLYADWPHSDEVISKLTVSELEKLLPDLSSGMVPKMEGCLHAVRNGVNTARVLDGRVQHSILLEIFTDSGIGTMVVPDHQPGGTE
>NZ_CP020039.1|WP_079404431.1|1902126_1903284_-|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ
MSVTAAQGFTAAGIAAGIKANGNPDLALVVNNGPRLAAAGVFTSNRVKAAPVHWSEQVLRGGTVSAVVLNSGGANACTGPKGFQDTHATAEKVAQALGGDFNAGEIAVASTGLIGVLLPMDKLLPGVETAAAALSADGGEDAAIAIKTTDTVHKTATVSRAGWTVGGMAKGAGMLAPGLATMLVVITTDADLDSATLDKALRAATRTTFDRVDSDGCMSTNDTVLLLASGASGQVPAYEDFAEAVRTVCDDLARQLIGDAEGASKDIRIEVIGAASEDDAVEVGRSIARNNLLKCAIHGEDPNWGRVLSAIGTTKAGFDPDRLNVAINGVWVCRNGSVGEDRDLVSMKDREVRITADLANGAESAVIWANDLTAEYVHENSAYSS
>NZ_CP020039.1|WP_079404432.1|1903280_1904309_-|N-acetyl-gamma-glutamyl-phosphate-reductase
MVVRVAVAGASGYAGGEALRLLLSHPEVEIGALTGNSNAGQLLGSLQPHLVPLAGRTLEATTPEVLAGHDVVFLALPHGQSAAVAAQLGDEVLVVDMGADHRLKDSADWDAFYGAPHAGTWPYGLPELPGAREALTGARRIAVPGCFPTAVSLALFPAYQGGFAEPEAVIVAATGTSGAGKALKPHLLGAEVMGSVTPYGVGGGHRHTPEMVQNLSPLAGERVSVSFTPTLVPMARGILATCSAKALPGTTAESLRAAYEKAYADEPFVHLLPEGQMPSTKSVHGSNAVHVQVAYDESARRIIAISAIDNLTKGTAGGAVQSMNIALGLPEQLGLSTIGVAP
>NZ_CP020039.1|WP_053704342.1|1904540_1905119_-|histidine-phosphatase-family-protein
MHVRVSLVAAARSSSLLAERFDDDRPLDGAGWRAVESAARGLVPLGSAELRYCSPTPRSRATGEALGYAPLAQPALRECDMGRWRGLTLAEVAAHEPGAVELWLSDPRSAPHGGESLLAFISRVGGWLDTRPADDGGAIVAVAEPSVVRAALVYALKAPPLTYWNVDVRPLSTMTLTGSSGRWYLSLQPAPA
>NZ_CP020039.1|WP_079404433.1|1905150_1906596_-|PLP-dependent-aminotransferase-family-protein
MYERSSVADLAESLRSELNRYSIGGKLPSSRALVERYRVSPVTVSRALAQLAAEGLVVTRPGAGVFRAAPRTAAPAAGDTSWQEVALSAEGAGDIVPRSVDATGVLGSLAAPPPGVIELNGGYLHPSLQPERAMAAALARAGRRPGAWGRPPLEGLPELRDWFAREIGGALVAADVLITAGGQSALATALRALAPPGAPILVESPTYPGLLAIARASGCRPVPVPVDAEGVRPELLAAAFEATGARVFVCQPLFQNPTGAVLAPGRRAEVLRIARAAGAFVVEDDYARALAHEDAGPLPATLAAEDADGVVVHVRSLTKSTSPSLRVGALAARGPVVDRLRAIQIVDSFFVPRPLQEAALELVGAPAWPRHLRTVAAELRHRREVLAGALRRELPALELPHLPSGGYQLWVRPAGGGDDTAFAAAALRAGVAVAPGRPYFCAEPPGPYVRLSFAGVAGPGELVEAARRLRTGLAEGLGPDA
>NZ_CP020039.1|WP_079404434.1|1906594_1907515_+|DMT-family-transporter
MTAQNSATLPTTIAVKNPVRRGTALALLGVVAFSLTFPATAWGLESFGPWSLVALRSALAAAIAGAFLLARRVPLPAREHWAGLAVIAAGVVVGFPMLTTLALTTSTTSHAAVVVGLLPLTTAALSAVRTGARPSRAFWAAALAGAAVVLAFVAWDGTLAQSGGALSAGDAYLFAALLVCAAGYTEGGRLARVLSGWQVIGWALVLCLPLSLAGSAAGLAYEPVHLGFHGLAGLIWAAAGSTFLGLYVWYRGMAEIGAPRASQLQLAQPLLTLVWSVALLGEHLSPAAPVAACAVLVCIAVTQRVK
>NZ_CP020039.1|WP_030387130.1|1907572_1907770_+|DUF1918-domain-containing-protein
MRATEGDQLVQHGRIVGQHDKVGEITQVLGENGTPPYRVRFQDGHEALMAPGPDCTVRHPAEPPH

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Crispr_ID: NZ_CP020039_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_5

1897914-1898013

Orphan

Consensus_repeat	Method
CGGCAGCTGGCCGCCCTGGCCGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_5

>merge|NZ_CP020039|5|1897914-1898013|CRISPRCasFinder
CTGCGCGGGGCCGGCCGGACCGCCGAGGCCGCGGACCACCTCGCCGACCGCTCCGGTCTGGTCCGGGCCTGCGCCCGCTGGCTGGTCCGCCAGGCCGGCG

>NZ_CP020039|5|5|1897914-1898013|CRISPRCasFinder
CTGCGCGGGGCCGGCCGGACCGCCG	AGGCCGCGGACCACCTCGCCGACCGCTCCGGTCTGGTCCGGGCCTGCGCC
CGCTGGCTGGTCCGCCAGGCCGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_030387141.1\|1894333_1895761_-\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_CP020039.1\|WP_079404429.1\|1899986_1901192_-\|acetylornithine-transaminase	unknown	unknown	gnl\|CDD\|235112
NZ_CP020039.1\|WP_030387143.1\|1893078_1893630_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP020039.1\|WP_079404433.1\|1905150_1906596_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP020039.1\|WP_053704342.1\|1904540_1905119_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP020039.1\|WP_079404425.1\|1891537_1893082_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|184957
NZ_CP020039.1\|WP_079404430.1\|1901188_1902130_-\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|234869
NZ_CP020039.1\|WP_079404432.1\|1903280_1904309_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
NZ_CP020039.1\|WP_079404424.1\|1889992_1891468_-\|membrane-associated-oxidoreductase	unknown	unknown	unknown
NZ_CP020039.1\|WP_079407790.1\|1898683_1899370_+\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|226309
NZ_CP020039.1\|WP_078626398.1\|1887215_1887800_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP020039.1\|WP_079404426.1\|1893719_1894232_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380121
NZ_CP020039.1\|WP_079404431.1\|1902126_1903284_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	unknown	unknown	gnl\|CDD\|235441
NZ_CP020039.1\|WP_030387149.1\|1886671_1887178_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP020039.1\|WP_079404434.1\|1906594_1907515_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP020039.1\|WP_030765574.1\|1889349_1889979_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP020039.1\|WP_030010023.1\|1899442_1899979_-\|arginine-repressor	unknown	unknown	gnl\|CDD\|235116
NZ_CP020039.1\|WP_079404423.1\|1887873_1889055_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176544
NZ_CP020039.1\|WP_030387130.1\|1907572_1907770_+\|DUF1918-domain-containing-protein	unknown	unknown	gnl\|CDD\|378101
NZ_CP020039.1\|WP_079404427.1\|1895888_1897082_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_030387141.1\|1894333_1895761_-\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NZ_CP020039.1\|WP_079404429.1\|1899986_1901192_-\|acetylornithine-transaminase	gnl\|CDD\|235112	PRK03244, argD, acetylornithine transaminase.	0
NZ_CP020039.1\|WP_030387143.1\|1893078_1893630_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.16122e-06
NZ_CP020039.1\|WP_079404433.1\|1905150_1906596_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.22175e-96
NZ_CP020039.1\|WP_053704342.1\|1904540_1905119_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	5.20874e-21
NZ_CP020039.1\|WP_079404425.1\|1891537_1893082_-\|MFS-transporter	gnl\|CDD\|184957	PRK14995, PRK14995, SmvA family efflux MFS transporter.	1.02179e-103
NZ_CP020039.1\|WP_079404430.1\|1901188_1902130_-\|acetylglutamate-kinase	gnl\|CDD\|234869	PRK00942, PRK00942, acetylglutamate kinase; Provisional.	4.15265e-147
NZ_CP020039.1\|WP_079404432.1\|1903280_1904309_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	4.05381e-172
NZ_CP020039.1\|WP_079407790.1\|1898683_1899370_+\|L,D-transpeptidase-family-protein	gnl\|CDD\|226309	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown].	8.91104e-28
NZ_CP020039.1\|WP_078626398.1\|1887215_1887800_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	6.56149e-12
NZ_CP020039.1\|WP_079404426.1\|1893719_1894232_+\|hypothetical-protein	gnl\|CDD\|380121	pfam18143, HAD_SAK_2, HAD domain in Swiss Army Knife RNA repair proteins. Family of HAD domain phophoesterases observed in large eukaryotic proteins with predicted role in RNA repair, the so-called 'Swiss Army Knife' repair proteins. May be involved in phosphate group removal during RNA re-ligation.	0.000263981
NZ_CP020039.1\|WP_079404431.1\|1902126_1903284_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	gnl\|CDD\|235441	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ.	0
NZ_CP020039.1\|WP_030387149.1\|1886671_1887178_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.47906e-13
NZ_CP020039.1\|WP_079404434.1\|1906594_1907515_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.72739e-09
NZ_CP020039.1\|WP_030765574.1\|1889349_1889979_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	6.31665e-51
NZ_CP020039.1\|WP_030010023.1\|1899442_1899979_-\|arginine-repressor	gnl\|CDD\|235116	PRK03341, PRK03341, arginine repressor; Provisional.	2.33722e-85
NZ_CP020039.1\|WP_079404423.1\|1887873_1889055_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176544	cd08602, GDPD_ScGlpQ1_like, Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.	1.3419e-156
NZ_CP020039.1\|WP_030387130.1\|1907572_1907770_+\|DUF1918-domain-containing-protein	gnl\|CDD\|378101	pfam08940, DUF1918, Domain of unknown function (DUF1918). This domain, found in various hypothetical bacterial proteins, has no known function.	2.5138e-23
NZ_CP020039.1\|WP_079404427.1\|1895888_1897082_-\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0

>NZ_CP020039.1|WP_079404427.1|1895888_1897082_-|argininosuccinate-synthase
MTERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQGGEDLDVIRKRALDCGAVEAEVADASDEFANEYCLPAIKANALYMDRYPLVSALSRPAIVKHLVAAAKKHGATTVAHGCTGKGNDQVRFEAGIVALAPDLKCIAPVRDYAMTRDKAIAFCEEKQLPIATTKKSPYSIDQNVFGRAVETGFLEDIWNAPIEDIYEYTSNPALQREPDEVVISFKEGVPVAIDGKPVSVLQAIQQLNDRAGAQGIGRIDIVEDRLVGIKSREVYEAPGAIALITAHQELENVTVERELARYKRQVEQRWGEMVYDGLWFSPLKRALDGFINEANQHVTGDIRMTLHGGRAVVTGRKSDESLYDFNLATYDSGDTFDQSKAQGFIEIFGLSAKIAARRDLA
>NZ_CP020039.1|WP_030387141.1|1894333_1895761_-|argininosuccinate-lyase
MSSNKGDVRLWGGRFADGPSEALALLSASVHFDWRLAPYDIAGSRAHARVLHKAGLLTAEELDRMIAGLDRLEADVADGSFTGTVADEDVHTALERGLLERLGAELGGKLRAGRSRNDQVATLFRMYLRDHGRIIGGLIADLQDALVGLAETHHDVAMPGRTHLQHAQPVLFAHHVLAHVQSLSRDAERLRQWDTRTAVSPYGSGALAGSSLGLDPEQVAADLGFERGSVGNSIDGTASRDFVAEFAFITAMIGINLSRIAEEIIIWNTKEFSFVTLHDAFSTGSSIMPQKKNPDIAELARGKSGRLIGNLTGLLATLKALPLAYNRDLQEDKEPVFDSCDTLEVLLPAFTGMMATLTVNRERMEELAPAGFSLATDIAEWLVKQGVPFRVAHEVAGECVKVCEGEGIELDQLTDDQFAKISEHLTPEVRTVLNVKGALASRNGRGGTAPSAVAVQLTELKADLVIQHAWAAHKQ
>NZ_CP020039.1|WP_079404426.1|1893719_1894232_+|hypothetical-protein
MKPLLLIDVDGPLNPYAAKAQRRPEGYRTHRMRPTGWTEAERAKPLRVWLNHDHGAELLALADAYELVWATTWKDEANDWIGPHLGLPRLPFIDWPVMHGRAPRGTFWKTQYILEYAGERPFAWIDDDITAMDREYVERHHPAHALLRRIDERIGLVREDFDALAAWAAP
>NZ_CP020039.1|WP_030387143.1|1893078_1893630_-|TetR/AcrR-family-transcriptional-regulator
MAMDRDQVLRDAAALLSRKSTATMDEVARAAGIGRATLHRHFAGRDALVRALEDLGIREFEVAFDNARLDEGTAVEALGRLVAEAEPNAQLLAFLVTENQLFEGDEVNEGWARLDARVGALFRRGQQQGDIRIDLSPAWLTEALYALVGACAWAVMDGRVAAKDFQYMITELLLGGARRSVEK
>NZ_CP020039.1|WP_079404425.1|1891537_1893082_-|MFS-transporter
MSTTQQLNGPSGTETRSRGRWLALSVLVLAVLLVAVDATVLGLATPALSEDLKPSGTQLLWIGDIYSFVIAGLLVSMGSLGDRIGRKKLLLTGAAAFGAVSVLNAYATSPEMMIVARALLGVAGATLMPSTLALIRNIFHDPKERSLAIGIWGATASAGAAVGPVVGGALLQHFWWGSVFLINLPVMIALVVVGIKLLPESKNPVAGPWDLVSVGLSLVGVIGVVYAVKEVATHGVTWEVAVTAAAGAGALYAFVRRQFSLPSPLLDMRLFKHRGFSGAVLADLLTVFGLSGLVFFLSQFLQLVQGRDPLEAGLAELPAAIGAVVTGLIAGRYARRYSVRAIVAGGLGAIGLALGALTLIHKESGYPLLGAALLVVGLGAGFSFTVTADVILSSVPKEQAGSASAVSETAYELGAALGIALLGSIVTGVYQSFTAPASVAGPVADAAHESLGGAVEAAKVLDPHTAQVMVGAAQDAFVDGLRLASGVGAAVLLATAVAAWFLLRGQRLQDGLEH
>NZ_CP020039.1|WP_079404424.1|1889992_1891468_-|membrane-associated-oxidoreductase
MEINELTPAERRVWEAFPRGDGVDFRTAPEDSSADGADWGPGRTLRAEFLRAVLLGACPTVQGRVPGLKIKGAKIVGKLDLRYAVIDHPIRLRDCWFERKPLIYGAQLRALVLSDSTLPGLTASTVRVEVVLRLSCCRIAGPVRLQGAKISGGLFLQGAVIGPTGGEEADEPPLQLNHVEVDTDIIANDLIVHGQLRLNGSTVGGQIQLDRAQLLAPGAIALQAENLTVGTDLRGRRLKARGTVNLTGSRIPGQANLTRADLDNTGGTALRASSCAIGELWLRRCDQIRGDVNLRRSTIDLLHIDPEVWPARIAIDGLTYRTLAPHLPAEQRLPALEREESGYLTYAYEQLTAAYRTAGDETAARTVQLAKLRRHRGTLPRPARVWGLLQDATVGYGFRPLRAAGWLLALLMTGTLAYGFDPPRALKAGEAPDFNALFYTIDLMVPIVSFGQEAAFAPGGWYQWLSYLLIVTGWILATTTAAGISRSLQRQ
>NZ_CP020039.1|WP_030765574.1|1889349_1889979_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MRMMFRTRVEGIENIPGSGPVILAGNHLTFIDSMILPLVCDRTVHFIGKDEYVTGKGIKGRAMAWFFTGSGMIPVDRDGANGGVAALMTGRRILEEGKIFGIYPEGTRSPDGRLYRGRTGIARLTLMTGAPVVPFAMIGTDKLQPGGAGMPRPGRVTVRFGEPMEFSRYEGMDRDRYVLRAVTDSVMAEVMRLSGQEYVDMYATKAKAA
>NZ_CP020039.1|WP_079404423.1|1887873_1889055_-|glycerophosphodiester-phosphodiesterase
MTQGGAARRTVLGAAVLAAGTGITGLAAGSASAAGDGHGDGHGGGYGGFRDLPYPTVIGHRGASGYRPEHTLGSYRLALDLGADVIEQDLVPTRDGQLVCRHENEIGGTTDVADHPEFASRRTTKTVDGVSVTGWFTEDFTLAELRTLRAKERIPAVRQRNTLYDGQWAVPTFEEVLRWADREGRRRGRRVWLHVETKHPTYFRGLGLGLEEPLAKLLRRYGRDGRNAAVFLQSFEPSSIQRLSRLVSAPRVVLLSAAGTRPWDFEVAKDPRTVADLVKPEGLKWIAGFAQGIGPTMDLILPRDAAGGLGAPTTLVKDAHARGLLLHPYTARNENSFLPAEYRKGTDPTAYGNALAALRTYFEQGIDGIFTDNPDTGLLAAEAFRPGRRPVNR
>NZ_CP020039.1|WP_078626398.1|1887215_1887800_-|sigma-70-family-RNA-polymerase-sigma-factor
MDLLKAEYLDKLGPLLSAEAAAEAPGAGVDAADLEQAVWVRLLESGRRAPDPAEPAEPARWLRRAVRAEARLARRRARREVPYDHRRTAGDGHRRPSADGGPPAGTAAGAAPEDALMHGEENRALRSAVARLPGRCPELMKALLSPRDLTYREIAGELGISQGSLGPVRSRCLGCLRRMLAAEVAAPGLRGKER
>NZ_CP020039.1|WP_030387149.1|1886671_1887178_-|GNAT-family-N-acetyltransferase
MGMSVTISAAAAEDAEQIFKLQYLAFQREAELYGNYLIQPLTQSLDSLKGELATDTVLVARLGDEIVGTVRGNVDEDGTAKIAKLCVHPRLQGHGLGARLLRAVEEALASPGTTNRFRLHTGHKSESNLRLYRKAGYVQVGGRTASDGVQLVILEKEAKDPTDFTVSA
>NZ_CP020039.1|WP_079407790.1|1898683_1899370_+|L,D-transpeptidase-family-protein
MRTALVTGVTLVAALLPQAPAPLPDRLADTGGGSQLITAVAPAPGSTTGRVIWWERWAGRWHESGSAPARFGANGLTDGATRTQGTNTTPTGLYELPYAFGIRRAPVGTGHAYRRVSADSWWCQDNASAQYNRWVEPLPADCAPGEAEHLVTYEKQYAHALVIGFNYDRPVRGRGAGIFLHVNGKGATAGCVSVPERAMRAILRWADPGRRPHIAIGTESGDLAVTRY
>NZ_CP020039.1|WP_030010023.1|1899442_1899979_-|arginine-repressor
MSQAQDNEQGGQAVPQTRTARHRRIVDILNRQPVRSQSQLAKLLADDGLSVTQATLSRDLDELGAVKIRNTGGELIYAVPSEGGFRTPQAPLGESAKEERMRRLSGELLISAEASANLVVLRTPPGAAQFLASAIDQAELRAILGTIAGDDTLMLISRDPAGGQALADHLLRLAQKES
>NZ_CP020039.1|WP_079404429.1|1899986_1901192_-|acetylornithine-transaminase
MTKGTGNQEYGARWQAALTDNYGTPAVALVRGEGAQVWDADGKQYTDFVGGIAVNALGHAHPAIVAAVTEQVSTLGHVSNLFISEPVVALGERLLQLFGRPGKVFFCNSGAESIEAAFKIGRLTGRTHMVATDGGFHGRTMGALALTGQPKKQEPFRPLPGDVTHVPFGDVEALRAAVTEETALVVIEPIQGENGVVVPPAGYLTAAREITRATGTLLVLDEVQTGIGRCGQWFEHQAHEDVEPDIVTLAKGLGGGLPIGAVAAFGPVADLLRPGQHGTTFGGNPVACAAGLAVIDTIATGGLLDQVKARGERLRSGIEATGHSLVSHVRGAGLLLGIVLTEPLAARVQQAAQDAGFLVNAPAPDVVRLMPPYVLTEAEADAFVRALPGILDAAGGDGSGE
>NZ_CP020039.1|WP_079404430.1|1901188_1902130_-|acetylglutamate-kinase
MSDEKAGQPGTSGTARKHTALPKAQILIEALPWLTRHNGKVVVIKFGGNAMIDEDLKAAFAQDVVFLRQAGLKPVVVHGGGPQINAQLDKQGLVSEFKAGLRVTTPEAMDVVRMVLAGHVQRELVGLLNQHGPLAVGMTGEDARTIIATKHSPQIGGESIDIGRVGEITSIDTGAIEALLADGRIPVISSIAGSADDHHVYNVNADTAAAALAAALGAETLMVLTDVEGLYADWPHSDEVISKLTVSELEKLLPDLSSGMVPKMEGCLHAVRNGVNTARVLDGRVQHSILLEIFTDSGIGTMVVPDHQPGGTE
>NZ_CP020039.1|WP_079404431.1|1902126_1903284_-|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ
MSVTAAQGFTAAGIAAGIKANGNPDLALVVNNGPRLAAAGVFTSNRVKAAPVHWSEQVLRGGTVSAVVLNSGGANACTGPKGFQDTHATAEKVAQALGGDFNAGEIAVASTGLIGVLLPMDKLLPGVETAAAALSADGGEDAAIAIKTTDTVHKTATVSRAGWTVGGMAKGAGMLAPGLATMLVVITTDADLDSATLDKALRAATRTTFDRVDSDGCMSTNDTVLLLASGASGQVPAYEDFAEAVRTVCDDLARQLIGDAEGASKDIRIEVIGAASEDDAVEVGRSIARNNLLKCAIHGEDPNWGRVLSAIGTTKAGFDPDRLNVAINGVWVCRNGSVGEDRDLVSMKDREVRITADLANGAESAVIWANDLTAEYVHENSAYSS
>NZ_CP020039.1|WP_079404432.1|1903280_1904309_-|N-acetyl-gamma-glutamyl-phosphate-reductase
MVVRVAVAGASGYAGGEALRLLLSHPEVEIGALTGNSNAGQLLGSLQPHLVPLAGRTLEATTPEVLAGHDVVFLALPHGQSAAVAAQLGDEVLVVDMGADHRLKDSADWDAFYGAPHAGTWPYGLPELPGAREALTGARRIAVPGCFPTAVSLALFPAYQGGFAEPEAVIVAATGTSGAGKALKPHLLGAEVMGSVTPYGVGGGHRHTPEMVQNLSPLAGERVSVSFTPTLVPMARGILATCSAKALPGTTAESLRAAYEKAYADEPFVHLLPEGQMPSTKSVHGSNAVHVQVAYDESARRIIAISAIDNLTKGTAGGAVQSMNIALGLPEQLGLSTIGVAP
>NZ_CP020039.1|WP_053704342.1|1904540_1905119_-|histidine-phosphatase-family-protein
MHVRVSLVAAARSSSLLAERFDDDRPLDGAGWRAVESAARGLVPLGSAELRYCSPTPRSRATGEALGYAPLAQPALRECDMGRWRGLTLAEVAAHEPGAVELWLSDPRSAPHGGESLLAFISRVGGWLDTRPADDGGAIVAVAEPSVVRAALVYALKAPPLTYWNVDVRPLSTMTLTGSSGRWYLSLQPAPA
>NZ_CP020039.1|WP_079404433.1|1905150_1906596_-|PLP-dependent-aminotransferase-family-protein
MYERSSVADLAESLRSELNRYSIGGKLPSSRALVERYRVSPVTVSRALAQLAAEGLVVTRPGAGVFRAAPRTAAPAAGDTSWQEVALSAEGAGDIVPRSVDATGVLGSLAAPPPGVIELNGGYLHPSLQPERAMAAALARAGRRPGAWGRPPLEGLPELRDWFAREIGGALVAADVLITAGGQSALATALRALAPPGAPILVESPTYPGLLAIARASGCRPVPVPVDAEGVRPELLAAAFEATGARVFVCQPLFQNPTGAVLAPGRRAEVLRIARAAGAFVVEDDYARALAHEDAGPLPATLAAEDADGVVVHVRSLTKSTSPSLRVGALAARGPVVDRLRAIQIVDSFFVPRPLQEAALELVGAPAWPRHLRTVAAELRHRREVLAGALRRELPALELPHLPSGGYQLWVRPAGGGDDTAFAAAALRAGVAVAPGRPYFCAEPPGPYVRLSFAGVAGPGELVEAARRLRTGLAEGLGPDA
>NZ_CP020039.1|WP_079404434.1|1906594_1907515_+|DMT-family-transporter
MTAQNSATLPTTIAVKNPVRRGTALALLGVVAFSLTFPATAWGLESFGPWSLVALRSALAAAIAGAFLLARRVPLPAREHWAGLAVIAAGVVVGFPMLTTLALTTSTTSHAAVVVGLLPLTTAALSAVRTGARPSRAFWAAALAGAAVVLAFVAWDGTLAQSGGALSAGDAYLFAALLVCAAGYTEGGRLARVLSGWQVIGWALVLCLPLSLAGSAAGLAYEPVHLGFHGLAGLIWAAAGSTFLGLYVWYRGMAEIGAPRASQLQLAQPLLTLVWSVALLGEHLSPAAPVAACAVLVCIAVTQRVK
>NZ_CP020039.1|WP_030387130.1|1907572_1907770_+|DUF1918-domain-containing-protein
MRATEGDQLVQHGRIVGQHDKVGEITQVLGENGTPPYRVRFQDGHEALMAPGPDCTVRHPAEPPH

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Crispr_ID: NZ_CP020039_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_6

2133403-2133910

Orphan

Consensus_repeat	Method
CCACCNCGGTCNTCNCGAC	CRT

10 spacers

The CRISPR arrays of NZ_CP020039_6

>merge|NZ_CP020039|6|2133403-2133910|CRT
CCGCCACGGTCGTCACGACCGCCGCGGAACCCACCACGGTCGTCATCACGACGCGGGTACGAAGGACGGTCCCCACCACGGTCATCGCGACGCGGGTAGGACGGACGGTCCCCACCGCGGTCGTCACGGCGCGGGTAGGACGGGCGGTCGCCACCGGAGGGGCGACCACCGCGGTCGTCGTCACGGCGCGGGTACGAGGGACGGTCGCCACCGCGGTCATCGCGACGCGGGTAGGACGGGCGGTCGCCGCCACGGTCGTCACGACCGCCGCGGAACCCACCGCGGTCGTCATCGCGACGCGGGTACGAAGGACGGTCCCCACCACGGTCATCACGACGCGGGTAGGACGGACGGTCCCCACCACGGTCATCGCGACGGAAACCGCCGCCACCGCCGCCGGAGGGACGACCACCACGGTCGTCATCACGGCGCGGGTACGAAGGACGGTCGCCACCACGGTCATCACGACGCGGGTAGGACGGGCGGTCGCCACCGCGGTCGTCACGAC

>NZ_CP020039|6|1|2133403-2133910|CRT
CCGCCACGGTCGTCACGAC	CGCCGCGGAACCCACCACGGTCGTCATCACGACGCGGGTACGAAGGACGGTCC
CCACCACGGTCATCGCGAC	GCGGGTAGGACGGACGGTCC
CCACCGCGGTCGTCACGGC	GCGGGTAGGACGGGCGGTCGCCACCGGAGGGGCGA
CCACCGCGGTCGTCGTCAC	GGCGCGGGTACGAGGGACGGTCG
CCACCGCGGTCATCGCGAC	GCGGGTAGGACGGGCGGTCG
CCGCCACGGTCGTCACGAC	CGCCGCGGAACCCACCGCGGTCGTCATCGCGACGCGGGTACGAAGGACGGTCC
CCACCACGGTCATCACGAC	GCGGGTAGGACGGACGGTCC
CCACCACGGTCATCGCGAC	GGAAACCGCCGCCACCGCCGCCGGAGGGACGA
CCACCACGGTCGTCATCAC	GGCGCGGGTACGAAGGACGGTCG
CCACCACGGTCATCACGAC	GCGGGTAGGACGGGCGGTCG
CCACCGCGGTCGTCACGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_030386454.1\|2141079_2141862_+\|sporulation-protein	unknown	unknown	gnl\|CDD\|369195
NZ_CP020039.1\|WP_030386456.1\|2142603_2143107_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NZ_CP020039.1\|WP_030386460.1\|2145613_2146408_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044
NZ_CP020039.1\|WP_052877039.1\|2144036_2145026_-\|SPFH/Band-7/PHB-domain-protein	unknown	unknown	gnl\|CDD\|223407
NZ_CP020039.1\|WP_079404543.1\|2130705_2131977_+\|DUF1015-domain-containing-protein	unknown	unknown	gnl\|CDD\|377633
NZ_CP020039.1\|WP_053172689.1\|2129550_2130618_-\|HAD-hydrolase-like-protein	unknown	unknown	gnl\|CDD\|319832
NZ_CP020039.1\|WP_030389230.1\|2126064_2126412_+\|sterol-binding-protein	unknown	unknown	gnl\|CDD\|379708
NZ_CP020039.1\|WP_037861291.1\|2123957_2124902_-\|NAD-kinase	unknown	unknown	gnl\|CDD\|235121
NZ_CP020039.1\|WP_030386462.1\|2147600_2147846_-\|chaplin	unknown	unknown	gnl\|CDD\|367652
NZ_CP020039.1\|WP_079407812.1\|2132093_2132879_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|367841
NZ_CP020039.1\|WP_079404540.1\|2126546_2127392_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP020039.1\|WP_107469956.1\|2127388_2128474_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|227119
NZ_CP020039.1\|WP_106977604.1\|2125721_2125916_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079404548.1\|2146556_2147339_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079404546.1\|2143176_2143947_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP020039.1\|WP_107469957.1\|2128470_2129499_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|182464
NZ_CP020039.1\|WP_053169015.1\|2140329_2140971_-\|DNA-3-methyladenine-glycosylase	unknown	unknown	gnl\|CDD\|376746
NZ_CP020039.1\|WP_030386455.1\|2141920_2142454_+\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|182339
NZ_CP020039.1\|WP_053172695.1\|2124898_2125714_-\|TlyA-family-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|224110
NZ_CP020039.1\|WP_030386459.1\|2145110_2145539_-\|NfeD-family-protein	unknown	unknown	gnl\|CDD\|224501

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_030386454.1\|2141079_2141862_+\|sporulation-protein	gnl\|CDD\|369195	pfam07070, Spo0M, SpoOM protein. This family consists of several bacterial SpoOM proteins which are thought to control sporulation in Bacillus subtilis.Spo0M exerts certain negative effects on sporulation and its gene expression is controlled by sigmaH.	2.02365e-106
NZ_CP020039.1\|WP_030386456.1\|2142603_2143107_+\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	5.21189e-15
NZ_CP020039.1\|WP_030386460.1\|2145613_2146408_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	2.75844e-92
NZ_CP020039.1\|WP_052877039.1\|2144036_2145026_-\|SPFH/Band-7/PHB-domain-protein	gnl\|CDD\|223407	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones].	2.8054e-69
NZ_CP020039.1\|WP_079404543.1\|2130705_2131977_+\|DUF1015-domain-containing-protein	gnl\|CDD\|377633	pfam06245, DUF1015, Protein of unknown function (DUF1015). Family of proteins with unknown function found in archaea and bacteria.	1.25198e-120
NZ_CP020039.1\|WP_053172689.1\|2129550_2130618_-\|HAD-hydrolase-like-protein	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	5.45983e-97
NZ_CP020039.1\|WP_030389230.1\|2126064_2126412_+\|sterol-binding-protein	gnl\|CDD\|379708	pfam14864, Alkyl_sulf_C, Alkyl sulfatase C-terminal. This domain is found at the C-terminus of alkyl sulfatases. Together with the N-terminal catalytic domain, this domain forms a hydrophobic chute and may recruit hydrophobic substrates.	4.76053e-06
NZ_CP020039.1\|WP_037861291.1\|2123957_2124902_-\|NAD-kinase	gnl\|CDD\|235121	PRK03372, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional.	1.03694e-169
NZ_CP020039.1\|WP_030386462.1\|2147600_2147846_-\|chaplin	gnl\|CDD\|367652	pfam03777, DUF320, Small secreted domain (DUF320). Small domain found in a family of secreted streptomyces proteins. It occurs singly or as a pair. Many of the domains have two cysteines that may form a disulphide bridge.	3.61911e-17
NZ_CP020039.1\|WP_079407812.1\|2132093_2132879_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|367841	pfam04147, Nop14, Nop14-like family. Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production.	1.68198e-06
NZ_CP020039.1\|WP_079404540.1\|2126546_2127392_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	9.92114e-137
NZ_CP020039.1\|WP_107469956.1\|2127388_2128474_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|227119	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism].	4.05241e-103
NZ_CP020039.1\|WP_079404546.1\|2143176_2143947_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	9.19644e-23
NZ_CP020039.1\|WP_107469957.1\|2128470_2129499_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|182464	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease.	1.61599e-95
NZ_CP020039.1\|WP_053169015.1\|2140329_2140971_-\|DNA-3-methyladenine-glycosylase	gnl\|CDD\|376746	pfam02245, Pur_DNA_glyco, Methylpurine-DNA glycosylase (MPG). Methylpurine-DNA glycosylase is a base excision-repair protein. It is responsible for the hydrolysis of the deoxyribose N-glycosidic bond, excising 3-methyladenine and 3-methylguanine from damaged DNA.	1.85975e-83
NZ_CP020039.1\|WP_030386455.1\|2141920_2142454_+\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	4.68469e-62
NZ_CP020039.1\|WP_053172695.1\|2124898_2125714_-\|TlyA-family-RNA-methyltransferase	gnl\|CDD\|224110	COG1189, COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis].	2.32882e-100
NZ_CP020039.1\|WP_030386459.1\|2145110_2145539_-\|NfeD-family-protein	gnl\|CDD\|224501	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	3.41569e-17

>NZ_CP020039.1|WP_079407812.1|2132093_2132879_-|tetratricopeptide-repeat-protein
MVARLIDEDPEQAYAYSRIALRLASRVAAVREAAGFAAYATQKYSEALAEFRAAKRMTGSVELWPVMADCERGLGRPERALAMAGEPEVQKLDKAGQVEMRLVAAGARRDQGQLEAAIVTLQSPELASSSVQPWTARLRYAYADALLAAGREDEAREWFGKTLEADKDGATDASDRLAELDGVEFVDAAVDLADVDADVDIDEDIDEDEDEDDEEGDDPAEIAAAERASDVAEYYDEDDEEYEPLEQSEADSDADAEDDRA
>NZ_CP020039.1|WP_079404543.1|2130705_2131977_+|DUF1015-domain-containing-protein
MTTSGTAEHGLRLIPFHGLRYVPERVGSLAAVTSPPYDVVVRPDGVDHLESADPHNIVRLILPQAGTPAARNEQAARTLHDWLAEGILSADPEPALYVYEQRRAGLLQRGVIGALALSTADAGIVLPHEDVMPDVVTDRAGLMRATSANLEPLLLTYRGDDPAVGAAAVVERTARRAPLLSTTTEDGFQHRLWAITDPAELATVTADLSHRQALIADGHHRWATYLRLQEEHGSPTAWDFGLVLLVDTARYPLQVRAIHRMLRRLPVADALAALEGHFRVRPVDGPLPLALDALTDAAERGNAFILAGDGAFHLVTDPDLALLDRTVRHDRPEAWRRLDATVLHATLLDSLWNVPDAPDQITYIHDAASTVEMAERHGGTAVLLHPVREEVVRDLARQGVTMPRKSTSFGPKPATGLVLRGLG
>NZ_CP020039.1|WP_053172689.1|2129550_2130618_-|HAD-hydrolase-like-protein
MTRQSRTSPAASEQSLHQAYDTALLDLDGVVYAGGEAIAFAVESLAAARADGMHLAYVTNNALRTPDAVAEHLGELGIPTEAGEVITSAQAVARLIAEQVEPGSKVLVIGGEGLRVALRERGLVPVDSAEEEGLAAVVQGYGGPDLPWGRFAEASYAINRGVPWFASNTDLTIPGARGIAPGNGAAVEVVRIATGAEPQVAGKPLPPMHRETVLRTGAERPLVVGDRLDTDIEGAFNGEVDSLLVLTGVTDAEQLLRAEPRHRPTYVDRDLRGLLTGQPEVEPGPEGFRCGGWTAVATNGGVLELRAAEGTDGADAGDGADPLDGLRALCAAAWTAAGDGVCTLDAAKALARLGL
>NZ_CP020039.1|WP_107469957.1|2128470_2129499_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MVESPPEPERSAAPEAGAVAGLLVSFAVLALIAVVSIAVGAKQMSLDEVWHGLFAYAGTPADVVVRDLRIPRTLLGLMVGLGLGLSGAVMQALTRNPLAEPGILGVNAGAAAAVVSAISFFGASSLSEFVWWAFLGAALVSVVVYVLGGSRSATPVRLALAGTAASAALVGYINAVQLMDTKALDKLRFWTVGSLASANMDTVRQVAPFLLAGAVLALALGRPLNAMAMGDDTARALGAHLTRTRVGAMIAITLLCGAATAACGPIVFIGLMVPHLVRAFTGPDMRWVLAYSAVLSPVLLLGADIVGRVVTRPAELQVGVVTALIGGPVFIYLVRRKRMAQL
>NZ_CP020039.1|WP_107469956.1|2127388_2128474_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MTATTTVTATERPRRGRSGARPLHLPGGISLRVERRALAVGVLLTVVALALAVVLIGTGDFRIAPWDVVQTLLGNGTPAHDFIVNDLRLPRVLVALLVGAALGMSGGVFQSVSRNPLGSPDMLGFGYGSAVGALVVIVLFKGGATEVAVGALAGGLLAGVVVYLLAYKQGIQGYRLVLVGIGASAILIAVIQYLITKAQMIEATRAMVWLTGSLAGRDWAQVWPLLAVCAVLFPLVLGQGRALRMMEMGDDAAYAVGVRVERTRMLLMLAAIVLTTAASAAAGPISFVALAAPQLARRLTRSPGGNLLTGALMGSVLLMASDLASQRAFGADQLPVGVVTGLTGGVYLLWLLATERKAGRI
>NZ_CP020039.1|WP_079404540.1|2126546_2127392_-|ABC-transporter-ATP-binding-protein
MTAKYSDMRSGQVQRLTAENVTLGYDQRVIAENLSVEIPDNSFTVIVGPNACGKSTLLRALSRMLKPAAGRVLLDGQAIGSMPAKKVAKTLGLLPQSSIAPDGITVADLVSRGRYPHQGLLRQWSAEDERVVNESMASTGVAELADRAVDELSGGQRQRVWIAMALAQQTPLLLLDEPTTYLDIQHQIDVLDLCAELHENQGRTLVAVLHDLNHAARYATHLIAMRGGEAVAEGPPQEVVTAELVEKVFGLRCQVIDDPETGTPLVVPAARKARVVARVAL
>NZ_CP020039.1|WP_030389230.1|2126064_2126412_+|sterol-binding-protein
MATIQECREALDRLSDNLARADEGVRGAAAFDRSLSCHITDLDQTFTGRLQAGRIRVDALTPGPPADKAEIRLAMTGDDLVALVAGELKFAKAWASGRVRLEAGFRDLLRLKTML
>NZ_CP020039.1|WP_106977604.1|2125721_2125916_-|hypothetical-protein
MALGVVRTPTGHAGVDAHLARLADADHLAADGHVEVYEDVHRGLREALTALDAPPVPGPYENRS
>NZ_CP020039.1|WP_053172695.1|2124898_2125714_-|TlyA-family-RNA-methyltransferase
MAGVARRRLDAELVRRSMARSREHAAQLIAAGRVTVGGTTATKAATQVETSAALVVLKDDSDPDYVSRGGHKLAGALAAFQPQGLAVEGRRALDAGASTGGFTDVLLRSGVAHVMAVDVGYGQLAWSLQSDDRVTVKDRTNVRELTVEQLDGVPVDLVVGDLSFISIGLVLPALVRCCAPDADLVLMVKPQFEVGKDRLGSGGVVRSPELRAEAVREVAAQAAKLGLGVLGVTASPLPGPSGNVEYFLWLRAGAPALDPTDVDRAVAEGPQ
>NZ_CP020039.1|WP_037861291.1|2123957_2124902_-|NAD-kinase
MTDSSDSAGAGVSGVAGTGRTVFLLAHTGRPAAIRSAELVVQGLLRCGLGVRVMEYEAVDLPLPPEVELVTEFTPGALDGCELLIVLGGDGTLLRGAEFARASGVPMLGVNLGRVGFLAEAERDDLDKVVDRVVTRSYEVEERMTLDVVVRTNGDVVHRDWALNEAAVQKVSPERMLEVVLEIDGRPVTGFGCDGIVCATPTGSTAYAFSAGGPVVWPEVEALLMVPISAHALFAKPLVTSPTSVLAVEVQSGTPHGVLWCDGRRMLELPAGARVEVRRGAVPVRLARLHHASFTDRLVAKFALPVSGWRGAPH
>NZ_CP020039.1|WP_053169015.1|2140329_2140971_-|DNA-3-methyladenine-glycosylase
MSARPDRTPLPRSFFDRPVLTVAPDLLGRTLVRRTADGPLELRITEVEAYEGESDPGSHAYRGRTARNASMFGPPGHAYVYFIYGMWFSLNLVCGPPGRASGVLVRAGEITVGAELAAKRRVSARNPRELAKGPARLATALDVDRSLDGTDLCAGPDSPLSVLTGTPTSADLVSSGPRTGVGGAGAAHPYRFWITHDPTVSPYRAHAPRRRST
>NZ_CP020039.1|WP_030386454.1|2141079_2141862_+|sporulation-protein
MGFKKLFASLGAGGASVDTIITEPNVVPGGIVQGEVRIQGGSVEQQIEGLSVGLQARVEVEGGDQEYKQDIVFTKQRLGGAFQVQAGALHVVPFGLEIPWETPITHFGGQHLHGMNIGVSTELEIARAVDAGDLDAINVHPVPAQQAILDAFRQLGFTFRSADMERGHIRGTRQSLPFYQEIEFLPPSQYRGLHQVELTFISDGREMDVVLEMDKKPGLFTEGSDTYRCFQVGLQSYQDTDWAAYLNQWIASVGSQRNWF
>NZ_CP020039.1|WP_030386455.1|2141920_2142454_+|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MTEQGRAPLPHDFHPQVHAFTVTSEDLEPGADLGEAQVYSGGNVSPQLRWEGFPEGTESFAVTCFDPDAPTGSGFWHWVLFDLPVSVTELPAGAGSGKFEGLPAGAVHVRNDYGSRDFGGAAPPAGERHRYVFTVYAVDRAELGVGADASPAVVGFNLRFHTLGRAQLIGEYEAPVG
>NZ_CP020039.1|WP_030386456.1|2142603_2143107_+|HNH-endonuclease
MRDTLVLNASFEPLSTVTLNRAVVLVLQDKAVVEQSHPELRVRAATMELPMPRVIRLCRYVRVPFRRHAPWSRRGVLVRDQHRCAYCGKRATTVDHVLPRAQGGGDTWLNTVASCAEDNHRKAARTPEEAGMPLLRRPFVPSPAEAMLLALGVAGREALPEWLERSA
>NZ_CP020039.1|WP_079404546.1|2143176_2143947_-|sulfite-exporter-TauE/SafE-family-protein
MSIWESLAVLAAGIGAGTINTIVGSGTLITFPVLLATGLPPVTANVSNTLGLVPGSISGAIGYRKELQGQRARILRLGSVSLVGGLAGAILLLTLPSDSFDTIVPVLIGLALVLVVLQPRLAAALRRRQEAAGGDTGHPDGGPALLGGMLLASAYGGYFGAAQGVLYLGLMGLLLREDLQRINAVKNVLAALVNGVAAVVFLFVAEFDWTAVVLIAVGSTLGGQIGAKVGRRLSPTVLRAIIVTVGLLAIVQLLVG
>NZ_CP020039.1|WP_052877039.1|2144036_2145026_-|SPFH/Band-7/PHB-domain-protein
MQPIIIVLIILVVLVFIALVKTIQVIPQASAAIVERFGRYTRTLNAGLNIVVPFIDSIRNRIDLREQVVPFPPQPVITQDNLVVNIDTVIYYQVTDARAATYEVASYIQAIEQLTVTTLRNIIGGMDLERTLTSREEINAALRGVLDEATGKWGIRVNRVELKAIEPPTSIQDSMEKQMRADRDKRAAILQAEGVRQSEILRAEGEKQSSILRAEGDAKAAALRAEGEAQAIRTVFESIHAGDADQKLLAYQYLQMLPKIAEGDANKLWIVPSEIGDALKGLSGAMGNFGPMGGGGSGFNPGNTGKDGGGIPAARDKDGADRREQPPID
>NZ_CP020039.1|WP_030386459.1|2145110_2145539_-|NfeD-family-protein
MDIDAWVWWLIGAVGLGIPLVLTAMPEFGMFAVGAVAAAVTAALGGEVVAQVLVFVIVSVALIAVVRPIANRHRDQRPQHRSGIDALRGRTAVVLERVDGSGGRIKLAGEVWSARTLDTDTSFEPGQSVDVVEIDGATAVVM
>NZ_CP020039.1|WP_030386460.1|2145613_2146408_-|ABC-transporter-ATP-binding-protein
MSDVLELVDVSVVREGRALVDQVSWSVKEGERWVILGPNGAGKTTLLNLASSYLFPTKGSATILGSTLGKVDVFELRPRIGVAGIAMADKLPKRQTVLQTVLTAAYGMTATWQEEYEDVDEQRARAFLDRLGMTEYLDRKFGTLSEGERKRTLIARALMTDPELLLLDEPAAGLDLGGREDLVRRLGRLARDPLAPSMVMVTHHVEEIAPGFTHVLMIRQGKVVTAGPIDLELTSRNLSLCFGLPLVVERNGADRWTAQGLPLG
>NZ_CP020039.1|WP_079404548.1|2146556_2147339_+|hypothetical-protein
MHFEPRSGRLAAWGNALLAGLASPDEAVLSIVGEDAVHRVEGLPGETGPVGLTLALGRLRALGVTGLRVALPAPGHPLGLSGPPEFNARALEAEEAVVSVGAALGLVPEVSEAGPAGDVHVSVTWHVLPVREAPPADVPSLGEAERELAEALREATEVLTRLDVAGSGPVAEAALSAYRARAEAGREALAPGYPARAVRVLALAQRVDLMVSLAYENGHGGAVAASEMAARAEALRPVERVARRALVAAYNSAVEARERG
>NZ_CP020039.1|WP_030386462.1|2147600_2147846_-|chaplin
MKNFKKAAAVTMIAGGLLAAGAGVSSAHGGASAEGEALNSPGVASGNQVQVPVHIPVNVVGNTVNVIGLLNGAFGNTGVNA

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Crispr_ID: NZ_CP020039_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_7

2496177-2496269

Orphan

Consensus_repeat	Method
CGCCGGCGTTTGAGGCGCGGGGTCCGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_7

>merge|NZ_CP020039|7|2496177-2496269|CRISPRCasFinder
CGCCGGCGTTTGAGGCGCGGGGTCCGGGGCCGCCGAGCTACGGCCTCGCCGCCCGCTTCAGCCCCGCCGGCGTTTGAGGCGCGGGGGTCCGGG

>NZ_CP020039|7|6|2496177-2496269|CRISPRCasFinder
CGCCGGCGTTTGAGGCGCGGGGTCCGGGG	CCGCCGAGCTACGGCCTCGCCGCCCGCTTCAGCCC
CGCCGGCGTTTGAGGCGCGGGGGTCCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_030385624.1\|2500498_2501302_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277338
NZ_CP020039.1\|WP_053169134.1\|2503363_2504980_-\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP020039.1\|WP_030385609.1\|2485621_2485888_-\|(Fe-S)-binding-protein	unknown	unknown	gnl\|CDD\|377304
NZ_CP020039.1\|WP_079404728.1\|2501557_2503354_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341233
NZ_CP020039.1\|WP_030385608.1\|2485138_2485615_+\|bacterioferritin	unknown	unknown	gnl\|CDD\|153099
NZ_CP020039.1\|WP_079404724.1\|2490693_2491722_-\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|274155
NZ_CP020039.1\|WP_030385616.1\|2493847_2494588_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP020039.1\|WP_030385620.1\|2497147_2498089_-\|ROK-family-glucokinase	unknown	unknown	gnl\|CDD\|273246
NZ_CP020039.1\|WP_079404727.1\|2498693_2499851_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223082
NZ_CP020039.1\|WP_079407833.1\|2487771_2489682_+\|phenazine-specific-anthranilate-synthase	unknown	unknown	gnl\|CDD\|223225
NZ_CP020039.1\|WP_030385623.1\|2499891_2500332_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176861
NZ_CP020039.1\|WP_079407835.1\|2494758_2495538_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224561
NZ_CP020039.1\|WP_079404725.1\|2495530_2496118_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237868
NZ_CP020039.1\|WP_079407834.1\|2491887_2492532_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP020039.1\|WP_037859792.1\|2492591_2493818_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP020039.1\|WP_053169128.1\|2498150_2498615_-\|DUF5304-domain-containing-protein	unknown	unknown	gnl\|CDD\|375065
NZ_CP020039.1\|WP_079404729.1\|2505126_2506269_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP020039.1\|WP_030385610.1\|2486061_2487417_-\|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl\|CDD\|366662
NZ_CP020039.1\|WP_079404726.1\|2496318_2497068_-\|endonuclease	unknown	unknown	gnl\|CDD\|226098
NZ_CP020039.1\|WP_079404730.1\|2506292_2507408_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_030385624.1\|2500498_2501302_-\|metallophosphoesterase	gnl\|CDD\|277338	cd07392, MPP_PAE1087, Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	5.89552e-17
NZ_CP020039.1\|WP_053169134.1\|2503363_2504980_-\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	2.59595e-20
NZ_CP020039.1\|WP_030385609.1\|2485621_2485888_-\|(Fe-S)-binding-protein	gnl\|CDD\|377304	pfam04324, Fer2_BFD, BFD-like [2Fe-2S] binding domain. The two Fe ions are each coordinated by two conserved cysteine residues. This domain occurs alone in small proteins such as Bacterioferritin-associated ferredoxin (BFD). The function of BFD is not known, but it may may be a general redox and/or regulatory component involved in the iron storage or mobilisation functions of bacterioferritin in bacteria. This domain is also found in nitrate reductase proteins in association with Nitrite and sulphite reductase 4Fe-4S domain (pfam01077), Nitrite/Sulfite reductase ferredoxin-like half domain (pfam03460) and Pyridine nucleotide-disulphide oxidoreductase (pfam00070). It is also found in NifU nitrogen fixation proteins, in association with NifU-like N terminal domain (pfam01592) and NifU-like domain (pfam01106).	6.61006e-12
NZ_CP020039.1\|WP_079404728.1\|2501557_2503354_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341233	cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases. This family includes long-chain fatty acid (C12-C20) CoA synthetases and Bubblegum-like very long-chain (>C20) fatty acid CoA synthetases. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Drosophila melanogaster mutant bubblegum (BGM) have elevated levels of very-long-chain fatty acids (VLCFA) caused by a defective gene later named bubblegum. The human homolog (hsBG) of bubblegum has been characterized as a very long chain fatty acid CoA synthetase that functions specifically in the brain; hsBG may play a central role in brain VLCFA metabolism and myelinogenesis. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	0
NZ_CP020039.1\|WP_030385608.1\|2485138_2485615_+\|bacterioferritin	gnl\|CDD\|153099	cd00907, Bacterioferritin, Bacterioferritin, ferritin-like diiron-binding domain. Bacterioferritins, also known as cytochrome b1, are members of a broad superfamily of ferritin-like diiron-carboxylate proteins. Similar to ferritin in architecture, Bfr forms an oligomer of 24 subunits that assembles to form a hollow sphere with 432 symmetry. Up to 12 heme cofactor groups (iron protoporphyrin IX or coproporphyrin III) are bound between dimer pairs. The role of the heme is unknown, although it may be involved in mediating iron-core reduction and iron release. Each subunit is composed of a four-helix bundle which carries a diiron ferroxidase center; it is here that initial oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical products, and storage of ferric-hydroxyphosphate at the core. Some bacterioferritins are composed of two subunit types, one conferring heme-binding ability (alpha) and the other (beta) bestowing ferroxidase activity.	4.81214e-71
NZ_CP020039.1\|WP_079404724.1\|2490693_2491722_-\|6-phosphofructokinase	gnl\|CDD\|274155	TIGR02483, ATP-dependent_6-phosphofructokinase_1, phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal. [Energy metabolism, Glycolysis/gluconeogenesis].	0
NZ_CP020039.1\|WP_030385616.1\|2493847_2494588_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.26612e-48
NZ_CP020039.1\|WP_030385620.1\|2497147_2498089_-\|ROK-family-glucokinase	gnl\|CDD\|273246	TIGR00744, Glucokinase_Glucose_kinase., ROK family protein (putative glucokinase). This model models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. [Unknown function, General].	5.60996e-137
NZ_CP020039.1\|WP_079404727.1\|2498693_2499851_-\|hypothetical-protein	gnl\|CDD\|223082	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning].	5.00298e-37
NZ_CP020039.1\|WP_079407833.1\|2487771_2489682_+\|phenazine-specific-anthranilate-synthase	gnl\|CDD\|223225	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism].	3.18175e-53
NZ_CP020039.1\|WP_030385623.1\|2499891_2500332_-\|SRPBCC-family-protein	gnl\|CDD\|176861	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	2.98782e-51
NZ_CP020039.1\|WP_079407835.1\|2494758_2495538_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	2.69282e-40
NZ_CP020039.1\|WP_079404725.1\|2495530_2496118_+\|hypothetical-protein	gnl\|CDD\|237868	PRK14960, PRK14960, DNA polymerase III subunit gamma/tau.	0.0016809
NZ_CP020039.1\|WP_079407834.1\|2491887_2492532_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.54052e-66
NZ_CP020039.1\|WP_037859792.1\|2492591_2493818_-\|histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.00618e-24
NZ_CP020039.1\|WP_053169128.1\|2498150_2498615_-\|DUF5304-domain-containing-protein	gnl\|CDD\|375065	pfam17230, DUF5304, Family of unknown function (DUF5304). This family of unknown function is found in Actinobacteria.	1.57802e-50
NZ_CP020039.1\|WP_079404729.1\|2505126_2506269_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.78541e-69
NZ_CP020039.1\|WP_030385610.1\|2486061_2487417_-\|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_CP020039.1\|WP_079404726.1\|2496318_2497068_-\|endonuclease	gnl\|CDD\|226098	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only].	6.10611e-24

>NZ_CP020039.1|WP_079404725.1|2495530_2496118_+|hypothetical-protein
MAEHEEQSGGVPPLDEEAAWAAIVAGYGQEPPDPPGARPFKPIENLLLPEEDVKPLPKPEPPEPGGAPDGEPEPEPEPPVALGSSVVFAPGVGMTGPRDHSLAEPKDDDVSAAEEGHFVQPEPELPPADTTSKFAWLAVVGGPVLLLLAVLLQWEMTWWLTTLGIGGFLGGFATLVARMAQGDEEDDDPGRGAVV
>NZ_CP020039.1|WP_079407835.1|2494758_2495538_+|alpha/beta-fold-hydrolase
MPVLPGAEPFRHEGGEVGVLLCHGFTGSPQSLRPWAEYLAGRGLTVSLPLLPGHGTRWQDMQLTGWQDWYAEVDRALRELLDRCEQVFVFGLSMGGALTLRLAAKHGDAISGIVLVNPANKVHDPLAVTLPVTKHFIRSTPGIASDIAKPGSEEVGYDRVPTRAAHSLKKFLQLVDAELPQVTQPLLLLHSPQDHVVPPVDSARVLARVSSTDVTETLLEQSYHVATLDHDAERIFADSYAFIGRLAESVGREGAQAGG
>NZ_CP020039.1|WP_030385616.1|2493847_2494588_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MKFSIGGSLKLAFRPWVEGLENVPAEGPAILASNHLSFSDSLFLPAVLDRKVTFIAKAEYFTSPGVKGRLTAAFFKGVGQLPVDRSGARGAGEAAIRSGIEVIERGELFGIYPEGTRSPDGRLYRGKPGGLARVALATGAPVIPVAMIDTEKIQPPGKVIPKLMRPGIRIGKPLDFSRYHGMDNDRFILRSVTDEVMYEIMKLSGQEYVDIYATAAKRQIADAEKAAKAEKSDKPDKGEKAGGTPE
>NZ_CP020039.1|WP_037859792.1|2492591_2493818_-|histidine-kinase
MGEMAKRERVVRMSVEQPLWRALTAYRLLTMVYAVLLFASAYKDFPRPAVAAGYLAALALWNLVTFRKVANAASCTKGFLVADLTVAIVGIVLTPIADTHERITGGGPTLPTIWTAGAVLGFAIKGGWRWACFASTIVAGANIVIHSGQPTRDTLHNVLLVWVASVAIGYVVEVARASENTLARALEIEAATRERERLARDIHDGVLQVLAMVQRRGSELGGEAEELGRMAGEQEVALRTLVSSGLVQPSRVCRDGSRGALVDTYEVDEPGAEDGELDLRTLLAPHAGSRVSFAEPGTPVPLPVPAARELAAAVGAALDNVRKHAGDGARAWILVEDWGDEVIVTVRDDGPGIPAGRLDQAEGEGRMGVALSIRGRLRDLGGSADLVSVPGQGTEVELKVPRGRTDKR
>NZ_CP020039.1|WP_079407834.1|2491887_2492532_-|response-regulator-transcription-factor
MVVDDHPMWRDAVARDLAAAGFDVVATAGDGAEAVRRARAVTPDVLVLDLNLPGMPGVQVCKELVGAHPALRVLVLSASGEHADVLEAVKSGATGYLLKSAGAEELIDAVRRTAAGDPVFTPGLAGLVLGEYRRLATDPVPATSDEPKAPQLTDRETEVLRLVAKGLSYKQIAERLVISHRTVQNHVQNTLGKLQLHNRVELVRYAIERGLDDA
>NZ_CP020039.1|WP_079404724.1|2490693_2491722_-|6-phosphofructokinase
MKVGVLTGGGDCPGLNAVIRAVVRKGEQEYGCGFIGFKDGWRGAVEGRTVPLDIPAVRGILPRGGTILGSSRTNPFKTENGVRDIKENLAKYEVDALIAIGGEDTLGVAARLYEEYGIPCVGVPKTIDNDLSATDYTFGFDTAVGIATEAIDRLHTTAESHMRVLVVEVMGRHAGWIALHSGLAGGANVILIPEQRFDVDQVCAWVTSRFRASYAPIVVVAEGAMPKDGEMVLKDGTKDSFGHVRLSGVGEWLAKEIEGRTGKEARTTVLGHVQRGGTPSAFDRWLATRFGLHAIEAVRDGDFGKMVALKGTDIVRVPIAEATAKLKTVDPALYQEAGVFFG
>NZ_CP020039.1|WP_079407833.1|2487771_2489682_+|phenazine-specific-anthranilate-synthase
MNLSSRLLDPSCPPFALLRRRTPGRDHDTVEVLIGQVREVERLADLPVGEQPALALVPFRQIRERGFDVRDDGTPLSVLVAEEAHEVPLAEALAGLPQHPVRVDGGGFDVPDEEYAATVRRVIEDEIGRGEGANFVIRRTYEGRIGGFGPADALALFRRLLEGERGTYWTYVVHTGERTLVGASPEVHVRMSGGTVVMNPISGTYRYPAGGPTAQSLLAFLGDRKETEELSMVVDEELKMMCTVGDRGGVVVGPRLKEMSHLAHTEYELRGRSSMDVREVLRETMFAATVTGSPVQNACRVIERYEAGGRGYYAGALALLGVDPAGAQTLDSPILIRTADIAADGVLRVAVGATLVRHSDPDGEVAETHAKAAGVLAALGVRPAAPRPAFEGARLADDPRVRAALAARRSDLAPFWLRMQEQPAPVTGHALVVDGEDTFTAMLAHLLRVAGLAVTVRRYDDPGLRAAALAWEGPIVLGPGPGNPADPADPRMRMLRALTADLLAGHRHGLVGVCLGHELLAAELGLPLVRKAEPAQGAQVRIGLFGAEEVVGFYNTYTAHCDGAGAERLAAAGVEVARDPATGEVHALRSAGGGFAGVQFHPESVLTLRGADLLRELLTAVAPGLRPDPVLSRRTG
>NZ_CP020039.1|WP_030385610.1|2486061_2487417_-|3-deoxy-7-phosphoheptulonate-synthase-class-II
MTVNAETQAPAAKATWRDLPAAQQPSYPDAEALRAVVADLESYPPLVFAGECDQLRARLGAVAKGEAFLLQGGDCAEAFDGVSADHIRAKLKTLLQMSAVLTYAASVPVVKVGRIAGQYSKPRSKDTETRDGVTLPTYRGDSVNGFAFTEEARIPDPERLKRMYNASASTLNLVRAFTTGGYADLRQVHAWNQDFVKSSPSGQRYEQLAREIDNALNFMKACGTDPAEFKAVEFYASHEALLLDYEGALTRTDSRTGKLYDTSGHMVWIGERTRQLDHAHIEFCSQIANPIGIKLGPTTTVDEALTYIDRLDPEREPGRLTFVVRMGADKVRDKLPELVEKVTASGATVGWVTDPMHGNTFEAASGHKTRRFDDVLDEVKGFFEVHKALGTHPGGIHVELTGDDVTECVGGGDEIFVDDLHQRYETACDPRLNRSQSLDLAFLVAEMYRDQ
>NZ_CP020039.1|WP_030385609.1|2485621_2485888_-|(Fe-S)-binding-protein
MNRVYVCSCFGITDKQVKEHAEAGACTPRQIASATKAGTDCGSCVRTIQGILGRGACPRRELLEKGEAASVLAAEPGPVRSPELAEAA
>NZ_CP020039.1|WP_030385608.1|2485138_2485615_+|bacterioferritin
MQGDPEVLEFLNEQLTGELTAINQYWLHYRIQDNKGWTKLAKYTREESIDEMKHADKITERILMLDGLPNYQRLFHVRVGQTLTEMFHADRQVEVEAIDRLKRGIEVMRGKGDITSARLFEEILEDEEHHIDYLDTQLELIESLGEPLYIAQLIEQPS
>NZ_CP020039.1|WP_079404726.1|2496318_2497068_-|endonuclease
MDQLPKSRTEPDGSAVIRVLSYNIRSLRDDEEALARVIRACEPDLVLVQEAPRFFRWRKHAARLAAKCDLVVLGGGATAAGPLLLCSLRVFVERAEDVLLPRTPGLHRRGFATAVIRVGGVRVGLASVHLSLQAAERRAHAELLLDRLAGMDVPYAIAAGDLNEGPDGPAYAVLAAELQDCRAVAPWGGGPTFPAAAPERRIDAVFASKGVEVLACGVPAGLPGVFAQDLRSATDHLPVLAALRLPAAP
>NZ_CP020039.1|WP_030385620.1|2497147_2498089_-|ROK-family-glucokinase
MGLTIGVDIGGTKIAAGVVDEEGTILETYKVPTPPTADGVTEAICAAVSEVSSNHTIEAVGIGAAGYVDDKRATVLFAPNINWRHEPLKDKVEQRIGLPVVVENDANCAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPENATILLALGDGTPEGIEGKHISEAARQGDLVAVDAFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGDLVLDPIRKSFKRWLVGGAWRPHAQVLAAQLGGKAGLVGAADLARQG
>NZ_CP020039.1|WP_053169128.1|2498150_2498615_-|DUF5304-domain-containing-protein
MSEATDRPTDDDAWARACAEDLAAEKERLRGQEQAGAGGTGTAAEELFKLFEAVADKVSGLNNPLFGVAAQGAVRQIVDQAKTAAKPVIERNPEVFDHLAAAGSELLAAYRSAVEGHERRWTRDEPPAPRQASHDRDPRDDGPDAGPSERIDLD
>NZ_CP020039.1|WP_079404727.1|2498693_2499851_-|hypothetical-protein
MHTLLITGPGGAGRTTAAAATALAAARRGRRVLLLSGDVGDPLTALVGDPAAAGLRVARVDSGEEFRDELVALQERGSALLGMVGARPLGAEEITELPGAEEFALLRALRRAAATPDADLVVVDMPPLHRAVATLALPAQLRRYLARLLPAERQAARALRPVLAQLAGVPMPAQWLYETAARWDEELAAVQAVVEADTTELRLVAEPGPAAADALRLGRLGLALQQLPVSSLVANRTVPAESADPWLAGLAAQQQKYAAEWAEELPVVALAHLGRDPRGPQDLERLADSDGLVPAAPAPRRAWAVEDRLAQDGVLVWVVPLPGAHKSDLDLVRRGDELLLTAGPHRRIVPLPGALRRCTVSGAALAEGELRIRFTPDPGLWPRTQ
>NZ_CP020039.1|WP_030385623.1|2499891_2500332_-|SRPBCC-family-protein
MAEHTSSSITIEAAPTDVMAVIADFARYPEWTGEVKEAEVLATDAEGRAEKVRLLLDAGAIKDDHTLAYSWKGTDEVSWTLDKSQMLRQLDGSYRLTAIDGGKRTEVTYQLTVDVKIPMLGMIKRKAEKVIIDRALAGLKKRVEAV
>NZ_CP020039.1|WP_030385624.1|2500498_2501302_-|metallophosphoesterase
MRGAQFGTSGSGRTRVHVVSDVHGNTEALARAGDGADALICLGDLVLFLDYADHSRGIFPDLFGVENADRIVELRTARRFEEARDLGRRLWTGLDRESLIEGAVRRQYAQMFAAFPTPTYATYGNVDIPGLWPEYADRHGLTVLDGQRVEIGGRVFGFVGGGLPSPMRTPYEVDPEEYAAKVEALGEVDVLCSHIPPEVPELCYDTVARRFERGSEALLAAIRRTRPRYALFGHVHQPLARRMRIGNTECVNVGHFAATGRPWVLEW
>NZ_CP020039.1|WP_079404728.1|2501557_2503354_+|long-chain-fatty-acid--CoA-ligase
MREFSLPALYEVPSDGNLTDLIRRNAAQHPDTAVMSRKVDGRWQDVTATEFLAEVRAAAKGLIAAGIRPGDRVALISRTRYEWVLFDFAIWSAGGVTVPVYETSSPEQVQWILGDSGAVAVIVESPAHSASVASLRDRLPELREVWEIEQGALETLKADGAKVSDAEVEERSSHANADDPATIVYTSGTTGRPKGCVLTHRNFFAECGNVVERLSPLFRTGECSVLLFLPAAHVFGRLVEVAAVLAPIRLGCVPDIKNLTDELQSFRPTLILGVPRVFEKVYNSARAKAQADGKGKIFDAAAETAIAYSRALDAPGGPSLGLRLKHKLFSKLVYSKLHTVLGGRGEYAISGGAPLGERLGHFFRGIGFTVLEGYGLTESCAATAFNPWDKTKIGTVGQPLPGSVVRIADDGEVLLHGEHIFKEYWRNETATAEALTDGWFHTGDVGTLDEDGYLAITGRKKELIVTAGGKNVAPAVIEDRIRAHALVAECMVVGDARPFVAALVTIDEEFLGRWAVENGKPAGVTAAELREDADLIAAVQKAVDDGNAAVSKAESVRKFRILPSQFTEESGHITPSLKLKRNVVAKDFADEIEALYRG
>NZ_CP020039.1|WP_053169134.1|2503363_2504980_-|GMC-family-oxidoreductase
MTSHLTRRQMLGLGALSTAAALGFTRIGAASAAAVEPAAAPYAPAIVVGSGYGSAVAALRLGQAGVRTVVLEMGRLWDTPGADGKVFPSTSAPDQRSMWFRNRTEAPLAQFLWLDVVNRDISPYPGVLDRVNYGDMSVYVGRGVGGGSLVNGGMAPTPRRSYFSEVLPQVDADEMYGTYYPRARAMLGVNDIDPGWFESTEWYRFARISRKHAQNTGLKTVFVPNVYDFAYMKREAAGTATRSALAGEVIYGNNHGKKSVDKTYLAAAIGTGNVTIETMQRVVGVRPDPAGGYVLTVRTSDVTGRVTQVRELGCRQLFLGAGSLGTTEILLRARERGTLPALSEKVGLGWGPNGNVMTARANHLWDTVGCNQATMPAMGIDDWDNAANPVFAEIAPLPMGIEHWISMYLAITKNRERGHFTYDAATDSARLNWRRDQNTPSVNAAKNLFDRINRRNFTIYRYDLFGDNRPFADNFTYHPLGGCVLGDATDAYGRAKGYQGLYVVDGSLVPGSLGVNPFVTITALAERNMARILAEDPR
>NZ_CP020039.1|WP_079404729.1|2505126_2506269_-|glycosyltransferase-family-4-protein
MHKTLIVTNDFPPRPGGIQAFLHNMALRLDPDRIVVYASTWKHGAEGREATAAFDAEQPFQVVRDRTTMLLPTPRVTRRAVGLLREHGCESVWFGAAAPLGLMGPALRRAGARRIVATTHGHEAGWAQLPAARQLLRRIGEGTDTLTYLGEYTRSRIASAVTDRAAARMVQLPPGVDEKTFHPGSGGPEVRARLGLTDRPVVVCVSRLVPRKGQDTLIEAMPRILAAVPDAVLLIVGGGPYEADLRALAVRAGVSDSVVFTGAVPWSELAAHYGAGDVFAMPCRTRRGGLDVEGLGIVYLEASATGLPVIAGDSGGAPDAVLDGETGWVVRGGSAEEAADRIVTLLKDPELRARMGAAGRAWVEEKWRWDLLAERLRELL
>NZ_CP020039.1|WP_079404730.1|2506292_2507408_-|hypothetical-protein
MPPVRRSLVRVLPLLLSVLLAGCGAPAPRDTAEREVRAAVAAWARTPPAQLAGIPLEDWAYEVSAVRRSGAAATVRAELRYRLGGFDAAAAVSAREVSLAREDGRWRVTGDRAAPGALPQLWDQGPVTVVRGAHSLVLGAGRDPAALSAIAAEADRAVPAVSAAWPGPWAGRAVVLVPGSLERMAQLLGRPAAEYRGMGAVTTGRVGAAPAPADRVVVNPEGWAELSPEGRRVILAHEVTHVATRAATTASTPLWLSEGFADWAAYRGAPATPEQAAPALARAVRRGEVPGELPRAQDFAFGGDPEALARAYEGAWLACRTVAERWGEAALVDLYGRAGREPWPVAVRGALGIDPQELTKDWQEALREQFR

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Crispr_ID: NZ_CP020039_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_8

2728697-2728848

Orphan

Consensus_repeat	Method
CCCAGCCCCGCCGGCGATTGAGGCGCGGCCACCGGCCCGCACCCGGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_8

>merge|NZ_CP020039|8|2728697-2728848|CRISPRCasFinder
CCCAGCCCCGCCGGCGATTGAGGCGCGGCCACCGGCCCGCACCCGGAAAAACAACCCCCACCGCCCGGCCAGGGCAGACACACCCCCGGGACGGGCAAAGCCATCCCAGCCCCGCCGGCGATTGAGGCGCGGCCACCGGGCCGCACCCGGAA

>NZ_CP020039|8|7|2728697-2728848|CRISPRCasFinder
CCCAGCCCCGCCGGCGATTGAGGCGCGGCCACCGGCCCGCACCCGGAA	AAACAACCCCCACCGCCCGGCCAGGGCAGACACACCCCCGGGACGGGCAAAGCCAT
CCCAGCCCCGCCGGCGATTGAGGCGCGGCCACCGGGCCGCACCCGGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_030390027.1\|2726341_2727352_+\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274647
NZ_CP020039.1\|WP_053173811.1\|2727348_2727774_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215613
NZ_CP020039.1\|WP_079404832.1\|2725426_2726242_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235585
NZ_CP020039.1\|WP_053171017.1\|2730011_2731094_-\|prenyltransferase	unknown	unknown	gnl\|CDD\|273702
NZ_CP020039.1\|WP_079404831.1\|2723551_2724193_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379276
NZ_CP020039.1\|WP_079404834.1\|2734096_2734591_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP020039.1\|WP_030390849.1\|2731090_2731825_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_CP020039.1\|WP_053173801.1\|2722496_2723345_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197775
NZ_CP020039.1\|WP_079404829.1\|2720647_2722234_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP020039.1\|WP_079404830.1\|2722270_2722537_-\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP020039.1\|WP_030390845.1\|2734799_2735033_-\|ferredoxin	unknown	unknown	gnl\|CDD\|224064
NZ_CP020039.1\|WP_079404835.1\|2735032_2736496_-\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143457
NZ_CP020039.1\|WP_030390021.1\|2724282_2725275_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP020039.1\|WP_079404833.1\|2727916_2728303_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237881
NZ_CP020039.1\|WP_078626792.1\|2729695_2729998_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_053705282.1\|2731891_2733211_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP020039.1\|WP_079404828.1\|2720031_2720619_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223000
NZ_CP020039.1\|WP_051779961.1\|2728946_2729516_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079407846.1\|2736729_2737767_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293811
NZ_CP020039.1\|WP_030390847.1\|2733429_2734053_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380056

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_030390027.1\|2726341_2727352_+\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274647	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family. Members of this protein family are predicted to be oxidoreductases dependent on coenzyme F420. The family includes a single member in Mycobacterium tuberculosis (Rv3520c/MT3621) but four in Mycobacterium smegmatis. Prediction that this family is F420-dependent is based primarily on Partial Phylogenetic Profiling vs. F420 biosynthesis. [Unknown function, Enzymes of unknown specificity].	4.83045e-165
NZ_CP020039.1\|WP_053173811.1\|2727348_2727774_-\|hypothetical-protein	gnl\|CDD\|215613	PLN03174, PLN03174, Chalcone-flavanone isomerase-related; Provisional.	0.00854442
NZ_CP020039.1\|WP_053171017.1\|2730011_2731094_-\|prenyltransferase	gnl\|CDD\|273702	TIGR01577, Uncharacterized_glycosyl_hydrolase_MJ1610, oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (1), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.	3.51087e-14
NZ_CP020039.1\|WP_079404834.1\|2734096_2734591_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.1635e-09
NZ_CP020039.1\|WP_079404831.1\|2723551_2724193_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379276	pfam13578, Methyltransf_24, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.35382e-21
NZ_CP020039.1\|WP_030390849.1\|2731090_2731825_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	8.90468e-27
NZ_CP020039.1\|WP_053173801.1\|2722496_2723345_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	2.51189e-07
NZ_CP020039.1\|WP_079404829.1\|2720647_2722234_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.82468e-77
NZ_CP020039.1\|WP_079404830.1\|2722270_2722537_-\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	3.33226e-21
NZ_CP020039.1\|WP_030390845.1\|2734799_2735033_-\|ferredoxin	gnl\|CDD\|224064	COG1141, Fer, Ferredoxin [Energy production and conversion].	3.52109e-07
NZ_CP020039.1\|WP_079404835.1\|2735032_2736496_-\|aldehyde-dehydrogenase	gnl\|CDD\|143457	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.	0
NZ_CP020039.1\|WP_030390021.1\|2724282_2725275_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	2.35703e-41
NZ_CP020039.1\|WP_079404833.1\|2727916_2728303_-\|hypothetical-protein	gnl\|CDD\|237881	PRK14985, PRK14985, maltodextrin phosphorylase; Provisional.	0.00998208
NZ_CP020039.1\|WP_030390847.1\|2733429_2734053_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|380056	pfam17925, TetR_C_20, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present the transcriptional regulator KstR that regulates a large set of genes responsible for cholesterol catabolism. This is important for Mycobacterium tuberculosis during infection, both at an early stage in the macrophage phagosome and later within the necrotic granuloma.	3.04482e-35
NZ_CP020039.1\|WP_053705282.1\|2731891_2733211_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	6.92408e-69
NZ_CP020039.1\|WP_079404832.1\|2725426_2726242_+\|hypothetical-protein	gnl\|CDD\|235585	PRK05733, PRK05733, single-stranded DNA-binding protein; Provisional.	0.00102245
NZ_CP020039.1\|WP_079404828.1\|2720031_2720619_+\|hypothetical-protein	gnl\|CDD\|223000	PHA03144, PHA03144, helicase-primase primase subunit; Provisional.	0.00480505
NZ_CP020039.1\|WP_079407846.1\|2736729_2737767_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293811	cd07725, TTHA1429-like_MBL-fold, uncharacterized Thermus thermophilus TTHA1429 and related proteins; MBL-fold metallo hydrolase domain. Includes the MBL-fold metallo hydrolase domain of uncharacterized Thermus thermophilus TTHA1429 and related proteins. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.71098e-44

>NZ_CP020039.1|WP_079404833.1|2727916_2728303_-|hypothetical-protein
MIEIVVVGIGAVGAGWLLRHWHRQRLAGAVPGIPCMARVPAGEGRWRAGRLSAEDGAARWVPERGEAVDLPGARATGVRVPSVKEGISINPGSRIVTCTYGDGKGIEIAVMPLDVRELLASVPQVDAP
>NZ_CP020039.1|WP_053173811.1|2727348_2727774_-|hypothetical-protein
MRMRTLAVAVAALTAGAIGFAPAAAADTVTTTPPLPWSLGLQTASGSGASHWTTVTRSDGYTLSHELTVDGTLTNTGSGCYRVEVAEFVFGFPSAVHDAGKICGAGTIPVHYQGTAYNASLYLCAVHPKGGCTAMAGPARF
>NZ_CP020039.1|WP_030390027.1|2726341_2727352_+|LLM-class-F420-dependent-oxidoreductase
MRLGLALGYWGRGPSPAHLDLATEAENLGYHSVWTAEAWGSDAFTPLTWIAAHTSRIRLGTAIAQMAARTPTATAMHALTLDHLSGGRMMLGLGLSGPQVVEGWYGRPFPSSPLTATREYVDVIRQVLRREAPVALDGRFHSHPYRGADGTGIGKPLKPITHPLRADLPVLLGAEGPKNIAQTTRIADGWLPLYWSPTRTDVYRASLTDLPDGFMIAPMARAKVCDDVAEGLLPVKAMLGFYIGGMGHAARNFHADLMARMGYEEEARRIQELFLAGRKEEAVLAVPDAFADEISLIGPRERIAERLDLWRKGPVTDLLLTAPDPHTLRVLAELNS
>NZ_CP020039.1|WP_079404832.1|2725426_2726242_+|hypothetical-protein
MNIRSLTRGDGVVIGAAALLFIASFLDFYSATGGDLPSAWDTDAYHLVLPSVFLIGFVAVGLLIAARFQPESRKVLGLPLSAWGTVLAVSAAWSALWSLITCPALLDLGAGSILAFLATLALAGVALFGSKVPALAGQLVPDPKPAAVPPYGGQPGQPQPGAGYGYPGAQQTPYGSTPQPVPPYGGTPNPGPGPQDSQQTPAPAADFTPFWFAVPVARPLYGEDGSPSPIAELAPGTWYLAVEQRGAATLIAQTQDGRRGVLNDTSGIQRG
>NZ_CP020039.1|WP_030390021.1|2724282_2725275_+|N-acetylmuramoyl-L-alanine-amidase
MRNDDSPPPPESGSSVNPDRPWFTRRSTLVVGVAALAPAALAGWVLTQAFAGSGSDGAPSAPQPASHSALSPGQRDAKPGSTPSESASTSPSASTSTPAAAPAPAKGPLTGKTVVVDPGHNVGNFQHTDEIDQQVDIGTARKECDTTGTTTNAGYKEADFTLDVSRRLRTALEAQGAKVVLTHQADRPWGPCITERARIGNEAKADAVVSVHADGVSAGNRGFHVILPAKVKGGAADTSKIVGPSRELGERIAGNFARTTGSAPANYLGSGTGLVVRDDLGGLNLSTQPKVFIECGNMRDAKDAAQLTSPEWRQKAAQGIADGIVGFLGG
>NZ_CP020039.1|WP_079404831.1|2723551_2724193_+|class-I-SAM-dependent-methyltransferase
MATPKPETLAAFEAAKGFMPVREGLALYEAAAAAGALGLPLLEVGTYCGRSTILLADAAREAGVAAITVDHHRGSEEQQPGWEYHDPTVVDPEIGLMDTLPTFRRTLHRAGLEDHVIAIVGRSPQVAATWGGELGFVFIDGGHTDEHATGDYEGWAPHVAVGGTLVIHDVFPDPADGGQAPYRIYLRALASGAFEEISVTDSLRVLRRTGPGL
>NZ_CP020039.1|WP_053173801.1|2722496_2723345_-|helix-turn-helix-domain-containing-protein
MVKIRELDPSASPLDYYGYELRRLREQAGLKQAQLGEIIFCTGSLIGQIETTKRVPTRDFSERVDAALGTGGVFSRLVGLVLRSVLPTWFQPYAEMEARASYISTFQAQLVYGLLQTPAYARAVLGVRTEGDLDAKVAARMDRQRILDREDPPLMWVVMSEAVLHQEIGGREVMRNQLAHLLALQGREWVKVQILPFEAGAHAGLPGSFNLLRFEDDPDIVYTEDFVQGHMTANPPALREGSLRYDHLQAAALSVEDSVARIARVMEERYGHHPEPDGRAVA
>NZ_CP020039.1|WP_079404830.1|2722270_2722537_-|DUF397-domain-containing-protein
MDTIRNLTGAQWRKSSYSSDTGGDCVECAPLGDTGWLKSSYSGDTGGQCVEIAAQPCLVAVRDSKDPEGPVFTVRPSAFAAFVRSVSV
>NZ_CP020039.1|WP_079404829.1|2720647_2722234_-|serine/threonine-protein-kinase
MEHVGPAGPTHVGPFAVAGVLGQGGMGRVLLCAGPDGRLVAVKQVLAHFADDAGFRARFRREVAASRKVSGAYTAAVMDADPDAPTPWLASVFVAGPSLGAVVKQDGVLDGAVVHRLAAGLASALAEIHRAGLIHRDLKPDNVLLAEDGVRVIDLGIARATEGETDGETGLTRTGWVIGSPAFMSPEQAESKPLTPASDVFSLGSVLVMAVTGNSPFAGTSTLQTLYDVVHSVPDLSAVPAGLRGIVERCLAKDPAARPTPAQLLELLGPVAPAGRQWPPAVYRMLAQQRADIDRLFSGEPADMTVAPPEPEPEPEPEPEPEVRPEPVDEVAVPPVVPPRPTAPPRPAPRIRQRTMALLAAGLLVATGIGVGAYALDREATADPAAYADVPACPEATERILLTGRESKDDFHGADAKQAHTMCSWYELQPVKRRNALVRWDVKRGGSDIANAKLQQTGFAADAARGRRANGLGFGDGAYWGASYQEWTCELAVRQGNLVVWVGLAQPQGCEAKAKEVAKAALAAVPGG
>NZ_CP020039.1|WP_079404828.1|2720031_2720619_+|hypothetical-protein
MAMTTKRRVLYRQGSGFWRMTAKWALVFGAVYLVDGGLIRSWSDAVTWPMIGVLLWAPLGIGVVWYPKKDQQVTLTTRELRVRRKRMPMDKVNLLHVARLWLEGRSTADDQPVLEWPRSVRGVWVPLLDGRAFGVEFRDPAAFAKVFGAFAVEACGGPDVVRARASAETYPEPRPMRVRSTADNGSWGDLLDIFD
>NZ_CP020039.1|WP_051779961.1|2728946_2729516_-|hypothetical-protein
MVGATACGSGGSGPREELSAASMGELAALAAAEPVAAEADELAAVTPSPSTSAEKQKFAKTRFVANASLAAGATYQWIVKPYRAGKFKKGAKGRTFALIKAGLAGAFAYNRLKAATQNAKGDPLLAKAVAPLAAGIESLKGLGSKLRKGQAGDGDIDAFDSVINSVKEAGQSAGATVTDKVPSTSQLGG
>NZ_CP020039.1|WP_078626792.1|2729695_2729998_+|hypothetical-protein
MSTHTRARTRGSSQAGRAVALVADVLAFVIALWILLYFLDANQGNSLVDLIHDVASWLATWSYDLFTFSREWVQVVVGYGIAAVTYLLVGHAIAGWLYRR
>NZ_CP020039.1|WP_053171017.1|2730011_2731094_-|prenyltransferase
MSTPGRTEHLVLDGVLTAEQAAETVAGILAAQRADGAIPWFRGHHLDPWDHTEAAMALDAAGEHEAADRAYAWLARHQNQDGSWYAAYADRPDGVDTTEPQDPSRESNFTAYIAVGVWHHYLSTGDDTFLDRMWPAVYAAVECVLTLQQPGGEIGWKREADGTAVTDALLTGSSSIHQALRCALAIAEHREEPQPDWELAAGALRHAIRRHPERFLDKNHYSMDWYYPVLGGALTGSEAKARIDGRWDEFVVPDLGVRCVLPNPWVTGGESCELALALWATGESDRALEILRSIGHLRADNGMYWTGYVFQDDAIWPVEQTTWTAGSLLLAVAALGGDEATTEVFGGTSLPAGLEPDCCG
>NZ_CP020039.1|WP_030390849.1|2731090_2731825_-|class-I-SAM-dependent-methyltransferase
MLTVDFSRFPLAAGDRVLDLGCGAGRHAFECYRRGAQVVAVDRNGEEIREVAKWFAAMKEAGEAPVGATATAMEGDALALPFPDDSFDVVIISEVMEHIPDDKGVLAEMVRVLKPGGRIAITVPRYGPEKICWALSDAYHEVEGGHIRIYKADELLGKMRAAGLKPYGTHHAHGLHSPYWWLKCAFGVDNDKALPVKAYHKLLVWDIMKKPMATRLAEQALNPLIGKSFVAYATKPHLPVGATQ
>NZ_CP020039.1|WP_053705282.1|2731891_2733211_-|glycosyltransferase-family-4-protein
MTAEAMVTSPFEGSAADGDRPLRIALLTYKGNPFCGGQGVYVRHLSRELVQLGHSVEVIGAQPYPVLDTGASLTELPSLDLYRSPDPFRTPKRDEYRDWIDALEVATMWTGGFPEPLTFSLRARRHLAARAGDFDVIHDNQTLGYGLLADLGAPLVTTIHHPITVDRKLDLDAATGRVKRASVRRWYAFTRMQGRVARRLPSVLTVSGSSKQEIAQHLGVRDERIHVVHIGADTDLWSPDPSVAEVPGRIVTTSSADVPLKGLVHLVEALAKLRTERPEAHLVVVGKRAEQGPVARAIETYGLQDAVRFVKGITDAELVDLVRSAQIACVPSLYEGFSLPAAEAMATGTPLVATTGGAIPEVAGTDGETCLAVPPGDAGALAAALGRMLGDPELRARLGAAGRERVLTRFTWAAAAKGTVAHYRAAIEQTAAGRTRRAR
>NZ_CP020039.1|WP_030390847.1|2733429_2734053_+|TetR/AcrR-family-transcriptional-regulator
MTAEVKAVTTPASPPLTERQEARRRRILHASAQLASRGGFDAVQMREVAEAAGVALGTLYRYFPSKVHLLVATMQDQLQHMHTTLRKRPPAGDDPAARVAETLMRAFRALQREPQLADAMVRALTFADRSVSPEVDTVSRLTTAIILDAMGLEHPPTAEQLSAVRVIEHTWHSALITWLSGRASIAQVKIDIETVCRLIDLTSPEKA
>NZ_CP020039.1|WP_079404834.1|2734096_2734591_-|GNAT-family-N-acetyltransferase
MTEADIEAVSTLRVRGWQHAYAGLMPQSYLDGLSIADDAARRRGYFSEASGEMTNLVAESADGAVVGWACFGPARGDDLPRGEGELYAIYARPDLIGTGIGRALLDEVLLRAPYLALRLWVLEGNTRARTFYERAGFSPDGAVCADPVEGVPVPEVRYHRPSAR
>NZ_CP020039.1|WP_030390845.1|2734799_2735033_-|ferredoxin
MGDRWQVEVDRGVCIGSGMCVNHAPDGFVLDSARQSHPRTAESDANEPILTAAEGCPVEAILITLAATGEPVFPPED
>NZ_CP020039.1|WP_079404835.1|2735032_2736496_-|aldehyde-dehydrogenase
MTELVEHGQLFIGGEWTDPLGTDTIRIVSPHTEQVIGSVPHASKADVDRAVAVARKAFDEGPWPRMTLDERIAVVSRIKDAIAVRHEEIARSISSQNGSPYSWSILAQALGPMMVYDAAITVARAYPYEEYRQGVLGPILVRREPVGVVAAVIPWNVPQFVAAAKLAPALLTGSTVILKPSPEAPLDSYILADIAREAGLPEGVLSILPADREVSEYLVGHPGIDKVAFTGSVAAGRRVMEVAARNLTRVTLELGGKSAAVILPDADLDATIAGIVPAAWMNNGQACVAQTRVLAPRSRYEEVAEALAAAAGALVVGDPLDPATQLGPLVARRQQQRSLDYIRIGQEEGAKVLSGGGRPAGLDRGWYVEPTLFGDVDNSMRIAREEIFGPVVCLIPYGDEAEAVRVANDSEFGLSGSVWTGDVEHGIDFARQIRTGTFNVNTFSLDMLGPFGGYKNSGVGREFGPEGLSEYLEHKMIHLPAGHEAGA
>NZ_CP020039.1|WP_079407846.1|2736729_2737767_+|MBL-fold-metallo-hydrolase
MPQVTDHGGGVWAIKVPIPDNPLGHTLVHVLDTDRGPVLIDTGWDDPASWDTLVAGLAALGTAVADVHGVVITHHHPDHHGLSGQVREASGAWIAMHAADTEVVVRTRASEPGVWFDYMSDKLAAAGAPEEHIAPLRAARASGRMRTLPGLRAAVPDREIVPAELLPLAGRRLRAIWTPGHTPGHVCLHLEEQHPANLPGNGRLFSGDHLLPGISPHIGLYEAPEDTRVTDPLGDYLDSLERIGRLGPAEVLPAHQHAFTDAPARVRELLDHHEERLAGLRALLAEPLTPWGLAERMEWNRPWEQIPYGSRNIAVSEAEAHLRRLVKQGHAEAVPGTDPVTYRAL

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Crispr_ID: NZ_CP020039_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_9

3422530-3422645

Unclear

Consensus_repeat	Method
CCGGCCAGCATCGTCGCGGCGTGGTCGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_9

>merge|NZ_CP020039|9|3422530-3422645|CRISPRCasFinder
CCGGCCAGCATCGTCGCGGCGTGGTCGATGCCCCGGCCCTGCGACCCGGGAGCCCCCGGCGGACCGGGCGGCTGCGGAACACCGGGGCCGGCCAGCATCGTCGCGGCATGGTCGAT

>NZ_CP020039|9|8|3422530-3422645|CRISPRCasFinder
CCGGCCAGCATCGTCGCGGCGTGGTCGAT	GCCCCGGCCCTGCGACCCGGGAGCCCCCGGCGGACCGGGCGGCTGCGGAACACCGGGG
CCGGCCAGCATCGTCGCGGCATGGTCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_107470174.1\|3431980_3434674_-\|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl\|CDD\|366019
NZ_CP020039.1\|WP_079405131.1\|3435096_3436077_+\|acyl-CoA-desaturase	unknown	unknown	gnl\|CDD\|224316
NZ_CP020039.1\|WP_079405122.1\|3419370_3420015_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP020039.1\|WP_079405116.1\|3410081_3412664_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|226957
NZ_CP020039.1\|WP_079405120.1\|3417570_3418458_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP020039.1\|WP_079407893.1\|3415511_3416360_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_030386186.1\|3429455_3430433_+\|ribose-phosphate-diphosphokinase	unknown	unknown	gnl\|CDD\|179535
NZ_CP020039.1\|WP_107470173.1\|3424965_3425430_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373065
NZ_CP020039.1\|WP_079405127.1\|3426239_3427535_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP020039.1\|WP_079405129.1\|3431311_3431902_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NZ_CP020039.1\|WP_159395591.1\|3416356_3416920_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079405121.1\|3418620_3419277_+\|DUF4232-domain-containing-protein	unknown	unknown	gnl\|CDD\|379419
NZ_CP020039.1\|WP_030386187.1\|3430628_3431213_+\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	unknown	unknown	gnl\|CDD\|235534
NZ_CP020039.1\|WP_079405119.1\|3416927_3417488_-\|CGNR-zinc-finger-domain-containing-protein	unknown	unknown	gnl\|CDD\|227803
NZ_CP020039.1\|WP_079407892.1\|3413933_3415391_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341045
NZ_CP020039.1\|WP_079405125.1\|3423624_3424620_-\|cell-wall-assembly-protein-Knr4	unknown	unknown	gnl\|CDD\|378155
NZ_CP020039.1\|WP_079405123.1\|3420073_3420946_-\|cellulose-binding-protein	unknown	unknown	gnl\|CDD\|274008
NZ_CP020039.1\|WP_079405128.1\|3427876_3429322_+\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|184641
NZ_CP020039.1\|WP_030386183.1\|3425432_3425939_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379608
NZ_CP020039.1\|WP_079405117.1\|3412660_3413449_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_079405122.1\|3419370_3420015_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.26341e-20
NZ_CP020039.1\|WP_079405116.1\|3410081_3412664_-\|FtsX-like-permease-family-protein	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	2.56781e-26
NZ_CP020039.1\|WP_079405120.1\|3417570_3418458_+\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	9.26393e-32
NZ_CP020039.1\|WP_079405131.1\|3435096_3436077_+\|acyl-CoA-desaturase	gnl\|CDD\|224316	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism].	4.44056e-67
NZ_CP020039.1\|WP_030386186.1\|3429455_3430433_+\|ribose-phosphate-diphosphokinase	gnl\|CDD\|179535	PRK03092, PRK03092, ribose-phosphate diphosphokinase.	0
NZ_CP020039.1\|WP_107470173.1\|3424965_3425430_+\|hypothetical-protein	gnl\|CDD\|373065	pfam14431, YwqJ-deaminase, YwqJ-like deaminase. A member of the nucleic acid/nucleotide deaminase superfamily prototyped by Bacillus YwqJ. Members of this family are present in a wide phyletic range of bacteria and a few basidiomycetes. Bacterial versions are predicted to function as toxins in bacterial polymorphic toxin systems.	2.52476e-17
NZ_CP020039.1\|WP_079405127.1\|3426239_3427535_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.02139e-33
NZ_CP020039.1\|WP_079405129.1\|3431311_3431902_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	5.41973e-94
NZ_CP020039.1\|WP_079405119.1\|3416927_3417488_-\|CGNR-zinc-finger-domain-containing-protein	gnl\|CDD\|227803	COG5516, COG5516, Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding [General function prediction only].	2.3657e-16
NZ_CP020039.1\|WP_079405121.1\|3418620_3419277_+\|DUF4232-domain-containing-protein	gnl\|CDD\|379419	pfam14016, DUF4232, Protein of unknown function (DUF4232). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 177 and 242 amino acids in length. Many members of this family are lipoproteins.	3.36153e-05
NZ_CP020039.1\|WP_030386187.1\|3430628_3431213_+\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	gnl\|CDD\|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	9.66848e-64
NZ_CP020039.1\|WP_107470174.1\|3431980_3434674_-\|phosphoenolpyruvate-carboxylase	gnl\|CDD\|366019	pfam00311, PEPcase, Phosphoenolpyruvate carboxylase.	0
NZ_CP020039.1\|WP_079407892.1\|3413933_3415391_+\|MFS-transporter	gnl\|CDD\|341045	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.20098e-61
NZ_CP020039.1\|WP_079405125.1\|3423624_3424620_-\|cell-wall-assembly-protein-Knr4	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	7.53215e-13
NZ_CP020039.1\|WP_079405123.1\|3420073_3420946_-\|cellulose-binding-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.000761739
NZ_CP020039.1\|WP_079405128.1\|3427876_3429322_+\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|184641	PRK14352, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU.	0
NZ_CP020039.1\|WP_030386183.1\|3425432_3425939_+\|hypothetical-protein	gnl\|CDD\|379608	pfam14433, SUKH-3, SUKH-3 immunity protein. This family belongs to the SUKH superfamily and functions as immunity proteins in bacterial toxin systems.	2.09815e-58
NZ_CP020039.1\|WP_079405117.1\|3412660_3413449_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	3.00918e-110

>NZ_CP020039.1|WP_079405123.1|3420073_3420946_-|cellulose-binding-protein
MSAPIATVRGRGYRMEEVDRYLARLSGSRDEAWERVARLTVLAKQMEAEAARLREAVSALAPQTYDELSERARRILLLAEEEADAVRTDARVDAAATLGAAEARADRAAELARGDAEAVREQTEVRARQGLLRAQREADDVRAAAREDAAGWRAQAAAALAETRRRADAEQAEREQEQAERWEAAERELVAREAELDARHAELERYAEARSAESRRGFAEAEESARHGLEDAEARAAELLAGARVAEERTERETRRILREHGEAAEEMRAHMNHVRSSLAALTGRAPAEG
>NZ_CP020039.1|WP_079405122.1|3419370_3420015_+|GNAT-family-N-acetyltransferase
MSTSAAQAPADRSTFVRTTLDLGDVLLHPWGRAIARPDAMLDGLMAAAADPLIALWNPLATAGRDDALAWLEARDGGWDRGAGASFAALDAADGALLGSVSLRWVDREDGLAMIGYWVLPNARGRGVATRATKAVTGWAFATTDARRIEIAHAVGNEASCRVAHRCGYLPEGTLRASHRFGDGVHHDEHLHARLATDPEPADPTAPTAHPSGAA
>NZ_CP020039.1|WP_079405121.1|3418620_3419277_+|DUF4232-domain-containing-protein
MHTSWRTYALAAAALAALLSSTACNPGLADPKNPAPSDTASGASAAPGTKSPPQGSAAPTTAATATPAGAVACNDNDLSITTSVWRQDSGQHLLVTATNFTDKTCTLYHYPYIGFGAVIEGPIDAMGSAPRAIATIGPKEKAYAGLFLYRGSEPTVAVGAVSIGYQDRALNSNRESAMLDVALSKEIGSLNVGTNARVTYWNRDLGAIEDFLFRSGTR
>NZ_CP020039.1|WP_079405120.1|3417570_3418458_+|alpha/beta-hydrolase
MTTARRTIPTIRHRTVDVDGVRVAYRESGPADGPVLLLLHGFPTASHQFARLMDALGDTPYRLIAPDYPGFGRTGTPAGFTYTFDRLADAVEGFTDALGLDRFALYVFDFGAPVGLRLATRRPERVTGLIVQNGNAYEEGLSDAAREFAGLRREVPGNEERVRNLFTLEGTRFQYETGVADPDLLSPDSWTLDVHHLGLPGRADAQADLAFDYASNFAQYPVWQAWLRSARIPVLVVWGAGDPFFTPAGAKAYLRDAPDAEVHVFEGAGHFALETHLPQIAPLIEDFLGGAAGGR
>NZ_CP020039.1|WP_079405119.1|3416927_3417488_-|CGNR-zinc-finger-domain-containing-protein
MTVTFPLTGEPLALDLLNTGAATGDFVADPAGLTAWLAVQAGRLTPVAAVGAAEVAAVRAVREAARPALDAVRRGERPPAGALRVLNEALAAAPSYRVLAWTEEGGTAAAAHRGAEPARRLAAELAEAAAELLTDPRVGQVRECEAHDCVLLFLPAHPRRRWCVASACGNRARVARYYARHKGDTP
>NZ_CP020039.1|WP_159395591.1|3416356_3416920_+|hypothetical-protein
MSPSPVRPSWRAPMKTWHRPVHTRERHAEIPTAHGTYTLLREPGPRLTADAKAEAWELWQFLLDGDTVLEIDDAGLPGEGMRRRVRHGIHGRLDGVPFTARAAGRSLRPSRRGIRFALEDGRTLSFTMHRFHRQLVRAAGGQDEVRARTRTGRWEADRLDRAEPALLCLVTVAGLDRLLASPLQEVL
>NZ_CP020039.1|WP_079407893.1|3415511_3416360_+|hypothetical-protein
MAALAGPLCLRLSRRPGFVTGRDGRLSTSTALALAWTVILLWLLLAVLGYGLTAGGGVAYFRGTDGPLSSLTTVYLPLLGGPYVALIAAKAVVGLRVEHGTLAKPAARPTGSGRRPLRELIANDSGRTDLVDLQYVALSAVTMLYVVLFFLADVGGGLPRLPSEMWALTGAPAGAYLVNKLAVRANPVITQVSLDDGRLTVEGGGFAPDPAGPPTLLTVDDTPLPVRADPLTGALTATLDPPRTPPFAVVVTARGLRSDPYCYASPSKPAVPAQQQPAESRP
>NZ_CP020039.1|WP_079407892.1|3413933_3415391_+|MFS-transporter
MLGMALVALDSTIVATAVPQIVGDLGGFSVFSWLFSGYLLAVTVTLPVYGKLSDTFGRKPVLLFGIGLFLVGSLLCASAWNMAALIAFRLVQGLGGGALQGTIQTLAADLYPLAERPRIQARMSSVWATSAVAGPALGGLLASYAHWRWIFLINLPLAGAALWMIARHLKEPVRSPGRRGPVDWAGALGVFACGGLLLFALVQGGVAWPWLSAPSLGLLGASAVLAAVVVRVERRAEEPILPGWVWRRRTIAAVNLALGALGLLMVAPMVFMPTYAQSVLGLGPVGAGLVMSVMTLSWPVSAALSQHVYRRIGFRNTAAVGIGLAAVILYSFTLLPYPARPWQPALIMLLLGGALGLFQLPLIVGVQSTVGWAERGTTTASVLFCRQVGQSVGAALLAAVANATIAARLADAPVPGLPEHLDDVAKALDRPELLPAAAADYLREAVAVAVEHIFLGATAAAVAALLVLLLVAPRRFPVLPDTNEE
>NZ_CP020039.1|WP_079405117.1|3412660_3413449_-|ABC-transporter-ATP-binding-protein
MTTAMTETRNGGTGGHAAVAARARKVVKAYGSGETRVVALDDVDVDIMSGQFTAIMGPSGSGKSTLMHCLAGLDTVTSGQIHLDDTEITGLKDKKLTQLRRDRIGFIFQAFNLLPTLNALENITLPMDIAGRKPDAEWLNRVVETVGLAGRLKHRPTELSGGQQQRVAVARALAARPQIIFGDEPTGNLDSRAGAEVLGFLRRSVDELGQTIVMVTHDPVAASYADRVIFLADGRIVDEMYGPTAEQVLDRMKDFDARGRTS
>NZ_CP020039.1|WP_079405116.1|3410081_3412664_-|FtsX-like-permease-family-protein
MSTVLKTSRRNFVAHKGRMALSAVAVLLSVAFVCGTLVFTDTMNTTFDKLFAVTSSDVTVSPKEAAEGDETPERGRPEILSGSAVEQVRKAEGVKSAEGGVVSMSVTVVNSKNENMGSTTGAPTIAGNWSDNELKSMKITSGNAPRGPTEVMVDADTAEKHHLKLGDELRTIAITGDIRAKISGIATFTVTNPGAAIVYFDTATSQQALLGSPGSFTHVNVTAKDGVSDEQLKQNIATAVGADTYKLQTAKEAADANRKDVGSFLDVMKYVMLGFAGIAFLVGIFLIFNTFSMLVAQRTREIGLMRAIGADSGQVLKSVVVEAFLLGVVGSLLGVGAGVGLAIGLMQLMGAMGMHLSTDDLTIAWTTPVVGIVLGVIVTVVSAFVPARRAGKVSPMAALRESGTPGDKKAGVVRAVLGLVLTGIGGAALYLATAAEKAGPGSLWLGLGVVLTLIGFIVIGPLLAAGVVRVLSGVVLRPFGSVGRLAERNALRNPRRTGATAAALMIGLALVACLSVVGSSMVASATEELDKSVGADYIVNSETGQPVLPQAEQALRATKGLDHVTAYREVAAKITAADGSTVEEGLGATDPTYAKDIRRKMVAGEHVAAYAANTMSVGSDYATQHGVRLGDELTVAFTGGNTVKLKVAAITSDEGNLDKGMKYISTEAARANVPADKLPLPFMLLASAQDGQSDATAYQSVKTALAEYPQYMVRNQTDYKQALKDQVGQLLNMVYGLLGLAIIVAVLGVVNTLALSVVERTREIGLMRAIGLSRRQLRRMIRLESVVIALFGALLGLGLGMGWGIGAQQLLALQGLKVLEIPWPTILGVFAASAFVGLFAALVPAFRAGRMNVLNAIASE
>NZ_CP020039.1|WP_079405125.1|3423624_3424620_-|cell-wall-assembly-protein-Knr4
MTTGRLGQQAAPPNAAYSGQVVHFPDPVRAARHPHGVRMDGNGHPDFSAYARAAVEIAEPPEGFGVDELRLTDYVSANAAMKAAGHELWDTVGPVATPHGWTWHHVAGSRRMELVPVEVKALLRHHAGLTTAPVDHEKRGTRPLQEVRPAHLGLPKSVVSVAEEQVQGVEEDLGYRLPEAYRSFLKAAGGCAPVGAGLDVDLGLLVDQPFFTVREEAAVNDLVYVNKCLRDHLTKDYLCVAFAQGGLIALKVKGEGIGSVWFSPYDDARDRDGWSVQERVERLLLPCGADFDAFLERLAGNPPELETVAGLMVDGGFARSVPVSGSAPVEG
>NZ_CP020039.1|WP_107470173.1|3424965_3425430_+|hypothetical-protein
MRWSSTDGRPAVPVLRFRRDGILPTVAAALSVRGETLTGTAGKADQPPVLHPLVQDFLDTLTSGQRERFTGRCPEAILLSRHLTAVEGARSRRASRKPLSPSEARRALKHAKITARRIREDGDPLHGSYAPPCRSCDALLAHFGVRSVDLTPAE
>NZ_CP020039.1|WP_030386183.1|3425432_3425939_+|hypothetical-protein
MTTASASYDRSSATRFPAAVDSALRTAGWEPGRWDIKQAEYWADALRDHTTPAGHRHTVFPAAVEAWAEFGGLTVTAHGAGRQIAPTPVRIDPLTGLHLARTFADLGRALSTQLCPLGVEADGGSHLGIDREGRVYGIDHTGDWYLGTTVDEALTLLLTGLQPTRLTT
>NZ_CP020039.1|WP_079405127.1|3426239_3427535_-|sensor-histidine-kinase
MTSTGEVEGRAGPPLWWARRRDAVGDVVLGGVSAVECAWEGVAFAAEAGLPTAVGVLFGFVVGATLVLRRRWPIAVVLVGIAVSPAAMGFLLAVVGMYTLASSEVPRRITATLASMSLAATFVVMYLRTRGDVEADPTLVVVLSGFVAVALTVPPVLFGLYIGARRRLMESLQERADSLERELSLLADRAEERAEWARTEERTRIAREMHDVVAHRVSLMVVHAAALEAVAVKDPARAAKNAALVGDMGRQALTELREMLGVLRAAPKPAAADPVPAVAVAAMAFAGAAGAAGGAGGAGMEDGPSLDELEVLVGQSRAAGMTVEMLVHGEGAAYAAEVEQTAYRVVQEALTNCHKHAPGARVVVRLAHRSGEVAMQVENGPCDGKATEPGLPSGGNGLVGMRERVLGLGGVFVSGPTDAGGFRVSAVLPTA
>NZ_CP020039.1|WP_079405128.1|3427876_3429322_+|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MSANRPAAVVVLAAGEGTRMKSATPKVLHEICGRSLVGHVVAASRELDPEHLVVVVGHAREQVTAHLAGIDADVRTAVQYEQNGTGHAVRMALEELGGGITGTVIVVCGDTPLLTGETLARLAQTHDADGNAVTVLTAEVPDSTGYGRIVRDAGGAVTAIVEHKDASDAQRAIREINSGVFAFDGALLADALGKVRTDNSQGEEYLTDVLGILREAGHRVGAAVGSDHRQILGINNRVQLAEARALLNARLLEQAMLAGVTVVDPAGTFVDVTVTFGQDAIVHPGTQLLGTTHIAEGAEVGPNTRLRDTHVGAGARVDNTVAESAVVGPQASVGPFAYLRPGTNLGAKAKAGTYVEMKNATIGEGTKVPHLSYVGDATIGEYTNIGAASVFVNYDGEHKHHTTVGSHCKTGSDNMFVAPVTIGDGAYTAAGSVITKDVPPGALAVARGQQRNIEGWVARKRPGSAAATAAQSAAAEDAERP
>NZ_CP020039.1|WP_030386186.1|3429455_3430433_+|ribose-phosphate-diphosphokinase
MTGIKTTGEKKLMLFSGRAHPELAEEVAHQLGVALVPTKAFDFANGEIYVRFQESARGADCFLIQSHTAPINKWIMEQLIMIDALKRASARSITVIVPSYGYARQDKKHKGREPISARLVADLLKTAGADRILTVDLHTDQIQGFFDGPVDHLSALNVLADYVGAKVDRTKLTIVSPDAGRVRVADRWCDRLDAPLAIVHKRRDKDVANQVTVHEVVGEVRGRVCVLVDDMIDTGGTICAAADALFAHGAEDVIVTATHGILSGPAADRLKNSKVSEFVFTNTLPDPSDLELDKITVLSIAPMIARAVREVFEDGSVTSLFEEQQ
>NZ_CP020039.1|WP_030386187.1|3430628_3431213_+|50S-ribosomal-protein-L25/general-stress-protein-Ctc
MSEIKLAAQTRTDFGKGSARQARRDALTPAVIYGHGTDPKHVNVDAHALQLALRTPNVLISLDIKDGGTELVIPKAVQKHPLKRSISHVDFLIVKKGEKVTVDVAIVTEGELAAGGNLLETLQNTISVEAEATHIPTEVTVSIEGLEAGATIHAKDLVLPTGTTLAVDGDIAVLQVVAPQAEEPAAEAAEGEEA
>NZ_CP020039.1|WP_079405129.1|3431311_3431902_+|aminoacyl-tRNA-hydrolase
MSDDAAPWLIVGLGNPGPEYAGNRHNIGFMVADLLAERIGGKFKAHKARAQVVEGRMGPPGPANRRVVLAKPMTYMNLSGGPVTALRDFYKVPLERIVAVHDELDIDYPTLRLKLGGGDNGHNGLKSMTKSMGPDYHRVRCGIGRPPGRMQVADFVLKDFSSTERKELEWFVDRAADSVECLIAEGLERAQSAYHT
>NZ_CP020039.1|WP_107470174.1|3431980_3434674_-|phosphoenolpyruvate-carboxylase
MRADIRRLGDLLGETLVRQEGQDLLDLVERVRALTRTDGEAAAALLGDTDLETAAKLVRAFSTYFHLANVTEQVHRGKELRAHRAAEGGLLARTADMLKDADPEHLRETVKNLNVRPVFTAHPTEAARRSVLNKLRRIATLLEEPVTGAGDRRRHDLRLAENIDLVWQTDELRVVRPEPADEARNAIYYLDELHAGAVGDVLEDLAAELQRVGVEIPAGTRPLTFGTWIGGDRDGNPNVTPEVTRDVLILQHEHGITDALDLIDYLRGLLSNSIRYTGATEELLASLQADLERLPEISPRYKRLNAEEPYRLKATCIRQKLLNTRERLAKGTPHEEGRDYLGTAELLTDLTLIQTSLREHRGALFADGRMDRTIRTLAAFGLQLATMDVREHADAHHHALGQLFDRLGEESWRYADMPREYRQKLLAKELRSRRPLAPTPAPLDAAGAKTLGVFGAIKDAFEKFGPEVIESYIISMCQGADDVFAAAVLAREAGLIDLHSGWAKIGIVPLLETTDELRAADVILDEMLADPSYRRLVSLRGDVQEVMLGYSDSSKFGGITTSQWEIHRAQRRLRDVAHRYGVRLRLFHGRGGTVGRGGGPSHDAILAQPWGTLEGEIKVTEQGEVISDKYLVPSLARENLELTVAATLQASALHTAPRQSDEALARWDAAMDVVSDAAHAAYRELVEDPDLPSYFFAATPVDQLADLHLGSRPSRRPDSGAGLDGLRAIPWVFGWTQSRQIVPGWFGVGSGLKALREAGQEDVLAEMGGRWHFFRNFLSNVEMTLAKTDLRIARHYVDTLVPDHLKHVFARIEAEHELTVREVLRITGAEELLGSNPVLQQTFAVRDAYLDPISYLQVSLLARQRAAAARGEEADPLLARALLLTVNGVAAGLRNTG
>NZ_CP020039.1|WP_079405131.1|3435096_3436077_+|acyl-CoA-desaturase
MTTSPDLIEGATAPSDTSEPSATLGGENKRSIEQIALLLFITVPFVALLAAVPLAWGWGVSWLDLGLMVFMYFLACHGITIGFHRYFTHGSFKAKRPLRIVLAVMGSMAVEGPLVRWVADHRKHHKYSDHEGDPHSPWRFGETLPALMKGLWWAHIGWLFDEEQTDQQKYAPDLIKDPAIRRISRDFIFWTMFSLAIPPLVGGLVTMSWWGAFTAFFWGSLVRVALLHHVTWSINSICHAVGKRPFKSRDRSGNVWWLAVLSCGESWHNLHHADPTSARHGVLRGQIDSSARLIRWFEQLGWATDVRWPSAARIDARRRENESNAA

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Crispr_ID: NZ_CP020039_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_10

3603655-3603758

Orphan

Consensus_repeat	Method
CGGAACACGGCGGTGCGCTCACTGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_10

>merge|NZ_CP020039|10|3603655-3603758|CRISPRCasFinder
CGGAACACGGCGGTGCGCTCACTGTCGGCGGGCTTCGCCTCGGCAGCGGGAGCAGGCTCGGACGGCGGCTTCACCGCACGGAACACGGCGGTGCGCTCGCTGTC

>NZ_CP020039|10|9|3603655-3603758|CRISPRCasFinder
CGGAACACGGCGGTGCGCTCACTGTC	GGCGGGCTTCGCCTCGGCAGCGGGAGCAGGCTCGGACGGCGGCTTCACCGCA
CGGAACACGGCGGTGCGCTCGCTGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_079405215.1\|3597014_3597992_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|281995
NZ_CP020039.1\|WP_079407911.1\|3608168_3608684_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_107470181.1\|3599742_3601467_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378373
NZ_CP020039.1\|WP_079405214.1\|3594617_3595325_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225917
NZ_CP020039.1\|WP_030390042.1\|3605623_3606508_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP020039.1\|WP_030390044.1\|3607201_3608059_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_030390041.1\|3604592_3605327_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377552
NZ_CP020039.1\|WP_079405211.1\|3591129_3592158_+\|fatty-acid-desaturase-family-protein	unknown	unknown	gnl\|CDD\|239587
NZ_CP020039.1\|WP_079407910.1\|3589879_3591133_+\|methylaspartate-mutase	unknown	unknown	gnl\|CDD\|238149
NZ_CP020039.1\|WP_079405221.1\|3611726_3616304_+\|type-IV-secretion-protein-Rhs	unknown	unknown	gnl\|CDD\|225750
NZ_CP020039.1\|WP_030390038.1\|3599390_3599621_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_107470180.1\|3597894_3599235_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236846
NZ_CP020039.1\|WP_079405220.1\|3611094_3611730_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079405219.1\|3608913_3610401_-\|diacylglycerol-kinase	unknown	unknown	gnl\|CDD\|224513
NZ_CP020039.1\|WP_079405213.1\|3593377_3594577_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP020039.1\|WP_079405210.1\|3589250_3589742_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239023
NZ_CP020039.1\|WP_079407912.1\|3610717_3611098_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_107469994.1\|3592157_3593381_+\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|235010
NZ_CP020039.1\|WP_030390047.1\|3608680_3608917_-\|amphi-Trp-domain-containing-protein	unknown	unknown	gnl\|CDD\|275149
NZ_CP020039.1\|WP_030390043.1\|3606728_3606938_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_079405215.1\|3597014_3597992_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	gnl\|CDD\|281995	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase. This family of proteins is found in the genera Mycobacterium and Streptomyces. Member protein Rv3547 has been characterized as a deazaflavin-dependent nitroreductase. Rv1558 is an F420H(2)-dependent quinone reductase involved in oxidative stress protection.	1.46181e-39
NZ_CP020039.1\|WP_079405219.1\|3608913_3610401_-\|diacylglycerol-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	4.71741e-33
NZ_CP020039.1\|WP_107470181.1\|3599742_3601467_-\|hypothetical-protein	gnl\|CDD\|378373	pfam10060, DUF2298, Uncharacterized membrane protein (DUF2298). This domain, found in various hypothetical bacterial proteins, has no known function.	0.00165428
NZ_CP020039.1\|WP_079405214.1\|3594617_3595325_+\|hypothetical-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	8.91557e-47
NZ_CP020039.1\|WP_030390042.1\|3605623_3606508_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.36007e-13
NZ_CP020039.1\|WP_030390041.1\|3604592_3605327_+\|hypothetical-protein	gnl\|CDD\|377552	pfam05719, GPP34, Golgi phosphoprotein 3 (GPP34). This family consists of several eukaryotic GPP34 like proteins. GPP34 localizes to the Golgi complex and is conserved from yeast to humans. The cytosolic-ally exposed location of GPP34 predict a role for a novel coat protein in Golgi trafficking.	1.77711e-42
NZ_CP020039.1\|WP_079405211.1\|3591129_3592158_+\|fatty-acid-desaturase-family-protein	gnl\|CDD\|239587	cd03510, Rhizobitoxine-FADS-like, This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins. Dihydrorhizobitoxine desaturase is reported to be involved in the final step of rhizobitoxine biosynthesis. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXX(X)HH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.	3.93535e-32
NZ_CP020039.1\|WP_079407910.1\|3589879_3591133_+\|methylaspartate-mutase	gnl\|CDD\|238149	cd00245, Glm_e, Coenzyme B12-dependent glutamate mutase epsilon subunit-like family; contains proteins similar to Clostridium cochlearium glutamate mutase (Glm) and Streptomyces tendae Tu901 NikV. Glm catalyzes a carbon-skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate. The first step in the catalysis is a homolytic cleavage of the Co-C bond of the coenzyme B12 cofactor to generate a 5'-deoxyadenosyl radical. This radical then initiates the rearrangement reaction. C. cochlearium Glm is a sigma2epsilon2 heterotetramer. Glm plays a role in glutamate fermentation in Clostridium sp. and in members of the family Enterobacteriaceae, and in the synthesis of the lipopeptide antibiotic friulimicin in Actinoplanes friuliensis. S. tendae Tu901 glutamate mutase-like proteins NikU and NIkV participate in the synthesis of the peptidyl nucleoside antibiotic nikkomycin. NikU and NikV proteins have sequence similarity to Clostridium Glm sigma and epsilon components respectively, and may catalyze the rearrangement of 2-oxoglutaric acid to 2-keto-3-methylsuccinic acid during nikkomycin synthesis.	6.63355e-155
NZ_CP020039.1\|WP_079405221.1\|3611726_3616304_+\|type-IV-secretion-protein-Rhs	gnl\|CDD\|225750	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane].	7.98725e-45
NZ_CP020039.1\|WP_107469994.1\|3592157_3593381_+\|ATP-grasp-domain-containing-protein	gnl\|CDD\|235010	PRK02186, PRK02186, argininosuccinate lyase; Provisional.	1.04684e-44
NZ_CP020039.1\|WP_107470180.1\|3597894_3599235_-\|HAMP-domain-containing-protein	gnl\|CDD\|236846	PRK11100, PRK11100, sensory histidine kinase CreC; Provisional.	1.77443e-37
NZ_CP020039.1\|WP_079405213.1\|3593377_3594577_+\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.08427e-07
NZ_CP020039.1\|WP_079405210.1\|3589250_3589742_+\|hypothetical-protein	gnl\|CDD\|239023	cd02072, Glm_B12_BD, B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.	6.83669e-12
NZ_CP020039.1\|WP_030390047.1\|3608680_3608917_-\|amphi-Trp-domain-containing-protein	gnl\|CDD\|275149	TIGR04354, conserved_hypothetical_protein, amphi-Trp domain. This domain usually comprises most of the span of bacterial or archaeal proteins with a length of about 90 amino acids. Some members, however, are extended by one or two copies of domain pfam07411 in the C-terminal region. No residue in this domain is invariant. A striking feature of this domain is a C-terminal region that alternates strongly charged with strongly hydrophobic residues and usually ends with a Trp residue, e.g. LEIEIEW or FEIKVRW, suggesting an amphipathic beta strand structure. We suggest the name amphi-Trp for this domain. Some members of this function occur regularly in genomic contexts that include putative kinases of unknown specificity related to (but distinct from) HPr kinase, a Ser-specific protein kinase. The function is unknown.	3.66539e-10
NZ_CP020039.1\|WP_030390043.1\|3606728_3606938_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	2.7948e-15

>NZ_CP020039.1|WP_107470181.1|3599742_3601467_-|hypothetical-protein
MLAGLLHVAWFFSFANSGGDLAAQDAWAEFVGRHPDSAYNLAWYGGMHPVSYSVVSPYLMHMLGVRTTMMIAGTVSAGLLALILTRCRRAVREPLWPALAGVYGLLCNALSGRVTFGLGVMFALGAVAAVFCWPRKWAERRWAKAAVAAPLAGLATAASPVAGLFLGVIAAALFLSGRRPGAYALGLAPVAVVGLSAWLFPFSGTQPMKIGSAGLPFVFALLILFLVPRRWRTVRIASAVYALGVFLTWAIDSQVGSNVTRMVMLFGGAVLLAALAYEVPRTRRWYGVLLALVGLNAWITANSITDIVRTTPLAAWSRELAPLVDQLQKAGADRGRVEVVPASSHRESSAFPSYVNLARGWNRQADLERNPLFYDDTLTADSYRAWLERWAVHYVVLPADKPDSGGEDEAKLVRAGVPYLQQVWGDANWQLFKVLDPTDLVSGPATVVRASADRLVVDVKQPGRVLVRIPHSPWLGLVDAAGKPVPPPQETFASKARGDSGDGGALRRQYANTAGCLFKAAPDDTGDVWTELLAPAPGEYRVAAKYQLPRGTPCPEDLVHQTLGQPNRPAPPRP
>NZ_CP020039.1|WP_030390038.1|3599390_3599621_-|hypothetical-protein
MLPEGVDDGMNKEQKRDVRAALAKAQEQAQPPRSAGHGFDGPVRSKVKGGMHTKAALKRAGTPQGDRIGERTSGLS
>NZ_CP020039.1|WP_107470180.1|3597894_3599235_-|HAMP-domain-containing-protein
MQRGERLRPRRRLLPAWTSTLTWKATVFITLMCCGLAALLGCLVHGAMTRQTVGTAREKALTRLERTIEAYEAGARMPRGEGVDPPGLPPDLRALALGGKRGTAVGRHRGRPVMWAAGPAAQGTAIAVSVDFRASERTIYELDRAILGSSGLAIGGTLLIGAFVVTRITRRLHLTAQVARRISAGDLDARVADSTRSKDEVAAVSRALDTMAASLQGKLEAEQRFTADVAHELRTPLTGLNAAAELLPPGRPAELVRDRVRAMRSLTEDLLEISRLETRSERVELDSHDLAELASRTIRASGTDTALEVRGSRGSLRVDTDHRRLERILGNLVANAHRHGAPPVALTVDGRTLTVTDSGPGYPEYLLTTGPQRFRTEGTGKGHGLGLTIAAGQARILGATLTFRNREAGGAEARVTLPGPAAPGATAPPHRRDAPPAPVSSAPSAR
>NZ_CP020039.1|WP_079405215.1|3597014_3597992_+|nitroreductase-family-deazaflavin-dependent-oxidoreductase
MWAGRWPGRHLSLKDRAHGHVRHRLRVISLGCFAAVARTHTVRNPHSVSSFNHTVIEEFRANAGHVGGPFAGSELILLTTTGARSGKPHTVPLGFVREDGRLLVVASAAGADRHPAWYHNLLARPLVQVETGAEEYEAVAVPAEGARRDELFAHVVRAEPGYGEYQERTRRVLPVVELRRTHEVPSGEGGIAGKLLDVHGWLRAQLALVRDLAREEPQDGGRASLGLQLRQHCLAFCHSLEFHHRSEDAGLFPYLEQQHPHMGEFFRRIGAEHAAIARLQEELVRALDAPGTGFSERMERMRRELEAHLDGEEAQLLPVLRALGA
>NZ_CP020039.1|WP_079405214.1|3594617_3595325_+|hypothetical-protein
MTVFRLSPEVSAAFPTAVIALVTAEGLRGHEPWPEVGAALADIEQAVASGQWAPADETDPRIASWHDAYRSFGTNPRRERPSVDALGRRLVRKGTLPRISSAVDAYNTVSIRHGLPAGAFDLDALSGDVVIRFATGSEEFVPLGEPDTVENPKAGEVIYEDGSSVLTRHWNHRDAHRTRVTEESVRVVFLLETVDADAYRGLLERAAQNLRDWLTPHASSTTVHFLSGENTEAKV
>NZ_CP020039.1|WP_079405213.1|3593377_3594577_+|MFS-transporter
MRLVHKGLGRYRRLLSEPGMAGCAVAALASKLQGSMFTLSLLLTVASGRSYAVAGAVAAVSALGGIAAPVRGRLLDRLSYASVLWSVLALHAALVTLIVVNEAAHGPLLLTFAGALAANTVAPPVGVLTRVMWRSVTTEETRSTALALDAVLADAGFIVGPLLVGVLSSVFVPHVALGAGVLISALATVLLLRALDGREPAKSSGKQQSWMGSLTSIPLRLHLGCALLFSAAVGVVEVSLISHGGDLLGSLSVSVLSAGSIVGGLVIGALPPVRAAQVSRLPRLLSYLGLAATALAVAGTSQPVVFIALTLAVGMAFGPCFVAVYGLTGDLAPIGTAAEAQAWVGAALQGGAALGQAAGAFAFGLWGFGAGVGLAPAFALMAVGLGLFTDLLRRPVTAQ
>NZ_CP020039.1|WP_107469994.1|3592157_3593381_+|ATP-grasp-domain-containing-protein
MTVRSRAVTRVLLIGGRHPAAARAARAAGIQVHYLGARDNAPTWLAVGADEATLIDDPAPGTVISAAKAIHVERAFGVALSVSDAYVEAAAVINESLGLPGNGPGVPRAVNDKARMREILRDSAAGAVVAARVSTADEVKKFASETGYPFILKPVDGSGSFGVTLISDADGLGDAIARTVGATAVAPENTWIAEEYLRGPEFSVETFSADGTHHLLAVTEKFKGPNFVEIGHLVPARVSADIVRSMTAEVNRCLDAVGLTEGPAHTEIVLTDKGPRIVETHCRPGGDGIVELVRLAVGLDVQRITFDWLAGRPLNLDRASEPQSAATWFLTPRAGTVSSVSGLDEALSAEGVTEAHVTVAPGAVISELRSSSDRAGAAIATGKTPDEALRRAREAAGRIEVTTEPTS
>NZ_CP020039.1|WP_079405211.1|3591129_3592158_+|fatty-acid-desaturase-family-protein
MTTNHVSPVPADSGAAVRSTVPPEDENTYRKGYRLPPGLREEIAAAHRSRPALTVICALADSAVALTAAVLCAWLLVSTSPLCSVPGSILGCVLIARQLRALENLTHEASHYNWSRHRRRMNDVLAWLLAGLPTGGRLSDYRASHLRHHGRFGTSQDPDQRRYAELELESMDRSSAARFAGSVLVRIWHYQVGWLHEVKSDLATTAGALLWSVALVAGPAALLAGPVAALVAEGLWVVSAFVVLPVLRLIAEADEHIYSDSGTVFDATISNVGLLHRVLVHPHADGYHTVHHLWPGIPHHALRRVHFTLMVQDPEYARRIRIRRRLLDTPQAVAVAEQKEGA
>NZ_CP020039.1|WP_079407910.1|3589879_3591133_+|methylaspartate-mutase
MGFGGIRQMRAGLAAVHDCDATAVGTLTVDSFTRVNDHDSARRALAEGEDLNGFPLVAHGPDTTRAMLDGLISESFPVQVRHGSPLPYALFQALTEAGLTATEGGPVSYCLPYSRTPLEDSIEAWARCCELLAERSRPGSVSHLESFGGCMLGQLCPPSLLIALSVLECLFFQQHGLRSVSLSYAQQTDPAQDREALAALRRLAGELLPGMDWHVVLYTFMGVFPQTRAGALAILGDSARLAVSAGAERLIVKTPAEAHRIPTVAENVHSLEYAAQEARNYRAVAPDPDSVADTGIYREAAALVEHTLSLDPDIGRALLRAFQLGTLDVPYCLHQDNAQRARAVVDDHGRLRWASVGSMPLPRSAQSARSRLSSSGLLHMLNYNQRRYDALATLPRQDAVRARGNEGEAAALPTGKQ
>NZ_CP020039.1|WP_079405210.1|3589250_3589742_+|hypothetical-protein
MDGAVVAGGGTVPGTPKRILLSGVSSDAHMWNLIFLQLLIEESGYQVMNLGPCAPDSLIVERCVSWRPDAVVISTVNGHGHLDGVRLIRAIREEGGPLATLTVVIGGKLGIHGTGNTRFHQQLLDAGFDAVFGAETGVVDFHRFLAVFGRSGQELVTMAGAGC
>NZ_CP020039.1|WP_030390041.1|3604592_3605327_+|hypothetical-protein
MGRSRRTIPEELLLLALDPATGTTAQPQSLDLGLAGAQLVELALAGRIAPDGDRIAVVMPRPTGDPTLDSALELLRRRGSPVRAVHWIGGPRLGLRQIYLAHLERCGMVHAVAGQMCGVLPTTRYQATDTEISREIRARLDSAIRTGVPPDPRTAALAALAHAVGLGKHLYPGNEGRSSRSRLRDLIRHDPMGGLVAHAVMDVQNGVAAQPRRDRAPAPPARATASSVPLQPRRTGAMARAAAH
>NZ_CP020039.1|WP_030390042.1|3605623_3606508_+|helix-turn-helix-domain-containing-protein
MASNVNPTVRRRRLGMELRKLREDKGMTAEQVAERLLVSQSKISRLENGRRSISQRDVRDLCDVYEVEDRRLIDSLMQMAKDSRQQGWWHAFGDIPYSVYIGLETDAASLRTYEPLVIPGLLQTTEYAQSLVRGAWPETAPADVDKRVQVRMHRQKRLSETENNNPDLGPLRLWAVIDEAALRRRVGDAPLMVRQLEYLIEQSEQPHVTVQVMPFELGAHPGVNGQYAILEFPDASDSTVVYIEGVTSDLYLEKANDVQKYSVMYEHLRAQALNVDQTRDFISGIINEYADKGA
>NZ_CP020039.1|WP_030390043.1|3606728_3606938_+|DUF397-domain-containing-protein
MAIRQGATTNWIKSSYSANGACVEVKSPVVEAIAVRDSKVQDGPSLTFAPGSWTSFVTDVTEGRLGRLA
>NZ_CP020039.1|WP_030390044.1|3607201_3608059_-|hypothetical-protein
MTTGEQDRQQDTRVDDYAELAAVGPYGVRPGHALITMVEPHPGHEYAYNRWYEDDHYYAGAMAMPWMYAGRRWVATRALQELRYPEKSAVAQPVTAGCYISTYWVTEGRYDEHMKWTVGINKRLNRDGRVYQDRTHVFTSFQDHVATVYRDGAAGPRDHHALDHPYEGLVVQVVDADGPEQRAELLEWLRSRALPKRLHGGPAAMVTVFRPTPLPGDRMTYVKQVEGVDTRLTLLWFLQEDPRTCWDRFRGLDEEVAQAGLGRVELVAPFIPTVPGTDRYVDQLR
>NZ_CP020039.1|WP_079407911.1|3608168_3608684_-|hypothetical-protein
MSRGRVTVSAEAPARRERRGDYTGAVYGSLLAASVVVGAGTLGPYPRLQLVVLLLSTGVVFWAAHVFSRLFGARMVNRLSWSVIRSEAREERPIIEAAVPPAIAAAISPWFGLGPQGVAWLALLVALVGQVGWATLAASRAGASRRLMLMAGAINLFLGLLIVLLKVGLQH
>NZ_CP020039.1|WP_030390047.1|3608680_3608917_-|amphi-Trp-domain-containing-protein
MKDLKFEQKRSLSRLEAADQLSALAEALRHGGNAELELGPGKMSLRVPDELRTEIEVEVGDGEIEMEIELKWPTASTG
>NZ_CP020039.1|WP_079405219.1|3608913_3610401_-|diacylglycerol-kinase
MSLPDPSGPPRRARWWALLAVVCAVCAVLTLVGEGIVGGLLVLAFGVAGAALTAMGTWWVVSHRGAVRLWGTLLVVGAPVAILFIYARADLWPTALVAIALWAAAVACARTALRSARRSHGMRAAARAAPRHPVLIMNPKSGGGKVGRFGLVEKGEALGARVVLLDPEVVTDVAALARRAVAEGADLLGVAGGDGTQALVAEVAAEHDLPFLVISAGTRNHFAMDLGLDREDPARCLDALVDGEELRVDLGSVGGHAFVNTASFGVYAEIVQRPEYRDAKADSALAALPDLLLGYAGTTLDAATDGTRLEAQQALLISNNPYSSPEPMGARRSRLDLGVLGVVGIRVNNAAQAADVALRGARAAGLHILTSRQVVVGSAAERIAVAVDGEALTLPTPVTCSVRPGALRVRVPRLRPGAPPVAPPMQWSEVLALAFKRRPERGPGNGPEPGTDPGPDPGPESGPESGPAGAARDARPPVRRHNEAYPVFVADWRHP
>NZ_CP020039.1|WP_079407912.1|3610717_3611098_+|hypothetical-protein
MPPTLDPVTQAREAARERLAGFRSRTVLVPLDVRGGLWTAELGGLYWICVFSDEEALARFAEARNESGREWTYRRVAGARLLDELLPGLDFRCGVAWNAAGPDGTVFPPIRGIVPNAAAIDGETAA
>NZ_CP020039.1|WP_079405220.1|3611094_3611730_+|hypothetical-protein
MSGDGADLDVSKQALGQIAKGITDSLAELKELGSVGMASMGGGFSELGLSGIETGHEGLTATLDTFCERWGWGVRSLVQQGNAFAMKVGLSTGAMYEQDHYIQGSFKAVANAALGNPYATERDIIDKNWGEVLSDNPITQIRDADYSPESFTRATENDNDAWKSAVRDVSSSDILLSNQLIDAAGLRDELDAVVDGTVGPAPEAQPGGEGR
>NZ_CP020039.1|WP_079405221.1|3611726_3616304_+|type-IV-secretion-protein-Rhs
MTDWGGLVDKGLDGIEHGVDSAKKVIGHGVDRATDEVGGFLDRVGAHGWEDKVEDFGDSAASRLGASVREQELGETEQADELIHGRPSAIRSSSQHFSDFRAAFDRVGQGMKALDSDRWKGQAAVAFRAKFAMHPTDWLRASDACESASSALGRYAETVEWAQKQAEEAIELHKAAVNASKEAHDAHVAKEDAYRTAAKAGRDPGPIPVEGADPGLAGRKRAKEILEEARRQRDEAATTAERALRSAMEHAPAEPPATDRLLAEIVDYAGSEAFELSHVVGGVAKGTAGTLNFARGLNPFDPYNLTHPADFQQNVNMTLADLVSTASQPDRIPGPLIDSYMADPSEFKGRLLPDLLGTKGFGGARAGMRFAEDAAESAARREAARAATKAEAEAAARRKADLECKGDPVDVATGRMVLPQTDLVLPGSLPLVFTRTFESSFRAGRWFGPSWASTVDQRLEIDEEGLILVREDGSLLAYPHPEPGATALPGHGQRWPLTLDTDGGYTVTDPESGLVRHFTDEGLLTQLDDRNGAWIAFTYDKWGTPTALSHSGGYEVRVTSSEGRITGLALTDGTEVLRYGYTDGHLSHVTNSSNSPLRFGYDELGRITSWTDTNGRHFDYVYDDRHRCVAQSGINGHLRVRFAYGDGSTTYANSLGHETRYLVDDRARITAEIDPTGATTRFTHDAYNRLLTRTDPLGHTTRCVYDEQGRLTTLVRPDGREVRAEYDELGLPITVIQPDGRVTHATYDERGNRTSATAPFGGVNRFTYDTRGHLASVTDALGAATTVRCDPAGLILEITDPLGATTRFTRDAFGRPIAITDPLGHTTRLTWSVEGRLLHRVNADGGTESWTYDGEGNCTSHTDPVGGVTASEYGEFDLLTAHTGPDGVRYSFAHDTELRLTEVTNPQGLTWTYAYDAAGRLACETDFDDRTLTYRYDAAGRLASRTNALGATTTYTHDSLSHLLSKTTADGVTSYAYDVFGELARAVSPDGTTLTLRRDRFGRVASETVDGRTLSYTYDGAGRRAGRITPSGSASEWTYDAAGQRRTLIASGRTLTFERDAAGRELTRTIGTGLDLVQTYDPLGRLTDQHLVGQDGRTLQRRGYCYRADGSLTAIDDALAGLRTFTLDAAARVTAVDAANWSERYAYDDAGNQTSASWPTRHPGAEAQGERAYTGTRITSAGSIRYEHDALGRVVLRQKTRLSRKPDTWRYKWDAEDRLVGVTAPDGTRWRYAYDALSRRTAKQRLTPTGEVAEEVLFTWDGTTLCEQTEGLATLTWTHHGLHPLTQAESILGTTDDRFFAIVTDLIGTPRELIDESGEIAWRARSTLWGSTTWTRDSTAYTPLRFPGQYFDPESGLHHNYFRTYDPETARYLTPDPLGLTPAPNPATYVSNPHTWSDPLGLTPCPELGLSDAAQRAIEKLENIKVDPVGEINSQPNHNHYDAARREAGGEVVARKKDGTPFDHIADLTQARNGLDHVRRTLEREISNLPDSITDRGLEVLIDKRKETIQILDRLNGFLHSIGRR

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Crispr_ID: NZ_CP020039_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_11

4219918-4219988

Orphan

Consensus_repeat	Method
AGTACGAGCAGCAGAAGTACGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_11

>merge|NZ_CP020039|11|4219918-4219988|CRISPRCasFinder
CCTACGAACAGCAGAAGTACGAGCAGCAGAAGTACGAGTCCCAGCAGCAGCACCAGGGCCATCAGTACGAG

>NZ_CP020039|11|10|4219918-4219988|CRISPRCasFinder
CCTACGAACAGCAGAAGTACGAG	CAGCAGAAGTACGAGTCCCAGCAGC
AGCACCAGGGCCATCAGTACGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_030383924.1\|4216552_4217065_-\|KH-domain-containing-protein	unknown	unknown	gnl\|CDD\|224760
NZ_CP020039.1\|WP_030383921.1\|4223416_4224292_+\|decarboxylating-6-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236582
NZ_CP020039.1\|WP_030383927.1\|4213246_4214335_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NZ_CP020039.1\|WP_053167452.1\|4217080_4218184_-\|membrane-protein-insertase-YidC	unknown	unknown	gnl\|CDD\|234941
NZ_CP020039.1\|WP_030383918.1\|4226475_4228497_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	unknown	unknown	gnl\|CDD\|235542
NZ_CP020039.1\|WP_078626055.1\|4218465_4218840_-\|ribonuclease-P-protein-component	unknown	unknown	gnl\|CDD\|376392
NZ_CP020039.1\|WP_030383920.1\|4224375_4225512_+\|DNA-replication/repair-protein-RecF	unknown	unknown	gnl\|CDD\|234608
NZ_CP020039.1\|WP_030008411.1\|4222021_4223152_+\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|236089
NZ_CP020039.1\|WP_078626056.1\|4214331_4215423_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP020039.1\|WP_079405542.1\|4233685_4235017_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP020039.1\|WP_030383919.1\|4225508_4226042_+\|DUF721-domain-containing-protein	unknown	unknown	gnl\|CDD\|179552
NZ_CP020039.1\|WP_052870555.1\|4215700_4216417_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_CP020039.1\|WP_030383916.1\|4231234_4231783_+\|DUF3566-domain-containing-protein	unknown	unknown	gnl\|CDD\|378809
NZ_CP020039.1\|WP_030383928.1\|4212526_4213144_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP020039.1\|WP_076043740.1\|4218187_4218469_-\|membrane-protein-insertion-efficiency-factor-YidD	unknown	unknown	gnl\|CDD\|184650
NZ_CP020039.1\|WP_078626072.1\|4232002_4232266_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_053701238.1\|4228540_4231147_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP020039.1\|WP_008741645.1\|4218861_4218999_-\|50S-ribosomal-protein-L34	unknown	unknown	gnl\|CDD\|366117
NZ_CP020039.1\|WP_079405541.1\|4232355_4233699_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_030383929.1\|4212118_4212457_+\|thioredoxin	unknown	unknown	gnl\|CDD\|200072

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_030383924.1\|4216552_4217065_-\|KH-domain-containing-protein	gnl\|CDD\|224760	COG1847, Jag, Predicted RNA-binding protein [General function prediction only].	1.19664e-41
NZ_CP020039.1\|WP_030383921.1\|4223416_4224292_+\|decarboxylating-6-phosphogluconate-dehydrogenase	gnl\|CDD\|236582	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_CP020039.1\|WP_030383927.1\|4213246_4214335_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	7.60024e-73
NZ_CP020039.1\|WP_053167452.1\|4217080_4218184_-\|membrane-protein-insertase-YidC	gnl\|CDD\|234941	PRK01315, PRK01315, putative inner membrane protein translocase component YidC; Provisional.	1.92181e-171
NZ_CP020039.1\|WP_030383918.1\|4226475_4228497_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	gnl\|CDD\|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	0
NZ_CP020039.1\|WP_078626055.1\|4218465_4218840_-\|ribonuclease-P-protein-component	gnl\|CDD\|376392	pfam00825, Ribonuclease_P, Ribonuclease P.	1.61932e-27
NZ_CP020039.1\|WP_030383920.1\|4224375_4225512_+\|DNA-replication/repair-protein-RecF	gnl\|CDD\|234608	PRK00064, recF, recombination protein F; Reviewed.	5.01748e-155
NZ_CP020039.1\|WP_030008411.1\|4222021_4223152_+\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|236089	PRK07761, PRK07761, DNA polymerase III subunit beta; Validated.	0
NZ_CP020039.1\|WP_078626056.1\|4214331_4215423_-\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	6.73106e-85
NZ_CP020039.1\|WP_079405542.1\|4233685_4235017_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	7.1442e-72
NZ_CP020039.1\|WP_030383919.1\|4225508_4226042_+\|DUF721-domain-containing-protein	gnl\|CDD\|179552	PRK03195, PRK03195, DUF721 family protein.	2.08866e-31
NZ_CP020039.1\|WP_052870555.1\|4215700_4216417_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	2.71343e-69
NZ_CP020039.1\|WP_030383916.1\|4231234_4231783_+\|DUF3566-domain-containing-protein	gnl\|CDD\|378809	pfam12089, DUF3566, Transmembrane domain of unknown function (DUF3566). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 136 to 304 amino acids in length. This region represents a transmembrane region found at the C-terminus of the proteins.	1.22589e-52
NZ_CP020039.1\|WP_030383928.1\|4212526_4213144_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.11393e-05
NZ_CP020039.1\|WP_076043740.1\|4218187_4218469_-\|membrane-protein-insertion-efficiency-factor-YidD	gnl\|CDD\|184650	PRK14369, PRK14369, membrane protein insertion efficiency factor YidD.	3.90707e-55
NZ_CP020039.1\|WP_053701238.1\|4228540_4231147_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP020039.1\|WP_008741645.1\|4218861_4218999_-\|50S-ribosomal-protein-L34	gnl\|CDD\|366117	pfam00468, Ribosomal_L34, Ribosomal protein L34.	4.50643e-09
NZ_CP020039.1\|WP_030383929.1\|4212118_4212457_+\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	8.91227e-43

>NZ_CP020039.1|WP_008741645.1|4218861_4218999_-|50S-ribosomal-protein-L34
MSKRTFQPNNRRRAKTHGFRLRMRTRAGRAILANRRGKGRAALSA
>NZ_CP020039.1|WP_078626055.1|4218465_4218840_-|ribonuclease-P-protein-component
MLSPENRLRRREDFASAVRRGRRAGRPLLVVHLRTSGATDPHEPGEIDPSTRAGFVVSKAVGNAVIRNRVKRRLRHLVRERLPQLPAGSLVVVRALPGAGDAGPDELARDLDAALVRLLGGVAR
>NZ_CP020039.1|WP_076043740.1|4218187_4218469_-|membrane-protein-insertion-efficiency-factor-YidD
MKYPLLALIKLYQWTISPLLGPVCRYYPSCSHYGYTAIDRHGAVKGTALTAWRILRCNPWSPGGVDHVPPRKRPRWHEQLRSALRRSRNAQGA
>NZ_CP020039.1|WP_053167452.1|4217080_4218184_-|membrane-protein-insertase-YidC
MDTIAGLFSFITTPVSWIIVQFHSLYGAVFGPDSGWAWGLSIVSLVVLIRICLIPLFVKQIKATRGMQALQPKMKAIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYSVLSSIASGKEIGYIDGPLLASARQAHIFGAPLAAKFTDSAAKAASLDASITDVRIVTAVMIVLMSLSQFYTQRQLMQKNVDLSVKTPFMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYVINQNPTPGSMAQDQYLTRLLKHISSHGDVKGRSKKKIVAAIVAKGPDRNDNERKFITALTKQGLAAQPDGSVIKSSEATADSDAASGGTAKRQQPKRQSKSQRQTPSKPSPKK
>NZ_CP020039.1|WP_030383924.1|4216552_4217065_-|KH-domain-containing-protein
MTEGTTTAAAESGDTLTRLEQEGEIAADYLEGLLDIADLDGDIDMDVEADRAAVSIVSDSASRDLNKLVGRDGEVLEALQELTRLAVHRETGDRSRLMLDIAGFRAKKREELAALGAQAAADVKASGEPMKLAPMTPFERKVVHDAVAAAGLRSESEGEEPQRFVVVLPA
>NZ_CP020039.1|WP_052870555.1|4215700_4216417_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MTEAAELPPAPEEARAVFGEFFPEAVRYAELLADAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPKGVTVCDVGSGAGLPGIPLALVRRDLKITLLEPLLRRTTFLQEAVELLGLDHVTVMRGRAEEVLGKLQPVHVVTARAVAPLDRLAGWGVPLLRPYGEMLALKGDTADDELVSAKTALAKLGVVKTSVLQVGEGLVDPLTTVVRVEVGESPGGVRFAAKRAKAARVGRTRRRR
>NZ_CP020039.1|WP_078626056.1|4214331_4215423_-|ParA-family-protein
MAGSVHREPDVEESDTVRSDANLAGPVADPVPGPRSESAGEDVSRETLPPPLVDNDDTPIGRAAQQAVEALGRAGERLPRPNQTRVIVVANQKGGVGKTTTTVNLAASLALHGARVLVVDLDPQGNASTALGIDHHADVPSIYDVLVDSRPLLEVVQPVVDVEGLFCAPATIDLAGAEIELVSLVARESRLQRAIQAYDQPLDYILIDCPPSLGLLTVNALVAGAEVLIPIQCEYYALEGLGQLLRNVDLVRAHLNPTLHVSTILLTMYDGRTRLASQVAEEVRSHFGKEVLRTSIPRSVRISEAPSYGQTVLTYDPGSSGSLSYLEAAREIAYRGVGMQYDARQAHLGPGMNSTQNVAEGIQ
>NZ_CP020039.1|WP_030383927.1|4213246_4214335_-|ParB/RepB/Spo0J-family-partition-protein
MSERRRGLGRGLGALIPAAPQEKTPPVISAGSTSPSAVPTLASERGVAAAKLASLVQADVSRETSLAVVPVAEPEPEAETNVVAGATFAELPMDAITPNPRQPRDVFDEDALAELVTSIQEVGLLQPVVVRQSAPGRYELIMGERRWRACREAGLEAIPAIIRATDDEKLLLDALLENLHRAQLNPLEEAAAYDQLLKDFNCTHDQLADRIGRSRPQVSNTLRLLKLSPSVQRRVAAGVLSAGHARALLSVEDSEEQDKLAHRIVAEGLSVRAVEEIVTLMASEPSSAVKPKGPRAGARVAPALSELATRLSDRFETRVKVDLGQKKGKITVEFASMEDLERILGTLAPGEGRVLEQGLTGE
>NZ_CP020039.1|WP_030383928.1|4212526_4213144_-|GNAT-family-N-acetyltransferase
MGRRLVPLTLDNLQDLPRRCRSCVFWELDPVSGEAAVKAGNPAQEKEAWISAVLLEWGSCGRVVYVDEVPVGFVLYAPAAYVPRATAFPTSPVSPDAVQLITAWIMPGYQGQGLGRVMVQTVAKDLLRRGFRAIEAFGDAHWEGPACLLPADHLLAVGFKTVRPHPVHPRLRLELRSTLSWKEDVELALDRLLGAARKEPALRPL
>NZ_CP020039.1|WP_030383929.1|4212118_4212457_+|thioredoxin
MAGTLKNVTDADFDAKVLKSDKPVLVDFWAAWCGPCRQIAPSLEAIAAEHPEIEIVKLNIDENPATAAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAILRDLAEFVEVKTA
>NZ_CP020039.1|WP_030008411.1|4222021_4223152_+|DNA-polymerase-III-subunit-beta
MKIRVERDVLAEAVAWAARSLPARPPVPVLAGLLLKAEEGTLSLSGFDYEVSARVSVEADVEEDGTVLVSGRLLADICRALPNRPVEISTDGVRATVVCGSSRFTLHTLPVEEYPALPQMPTATGTVAGEVFASAAKQVATAAGRDDTLPVLTGVRIEIEGDRVTLASTDRYRFAVREFLWKPENPDASAVALVPAKTLQEIANSLTSGDTVTLALSGSGAGEGLIGFEGAGRRTTTRLLEGDLPKYRTLFPTEFNSIAVIETAPFVEAVKRVALVAERNTPVRLSFEQGVLILEAGSSDDAQAVERVDAQLDGDDISIAFNPTFLLDGLSAIASPVAQLSFTTSTKPALLSGRPAIDAEADETYKYLIMPVRLSG
>NZ_CP020039.1|WP_030383921.1|4223416_4224292_+|decarboxylating-6-phosphogluconate-dehydrogenase
MELGLVGLGKMGGNMRERIRRAGHTVIGYDRNPDLADVHSLRELVDSLQAPRVVWVMVPAGAATQSTVDELAELLSIGDIVVDGGNSRWTDDEKHAGELAAKGIGFVDCGVSGGVWGLENGYALMYGGEKDHVARVQPIFDALKPEGEFGSVHAGKVGAGHFAKMVHNGIEYAMMQAYAEGWELLEKVDSVTDVREVFRSWQEGTVIRSWLLDLAVNALDQDEHLEQLRGFAQDSGEGRWTVEAAIDNAVPLPAITASLFARFASRQEDSPQMKMIAALRNQFGGHAVEKA
>NZ_CP020039.1|WP_030383920.1|4224375_4225512_+|DNA-replication/repair-protein-RecF
MHVSHLSLADFRSYARAEVPLDPGVTAFVGPNGQGKTNLVEAIGYLATLGSHRVSSDAPLVRMGADRAVIRAAVTQGERQQLVELELNPGRANRARINRSSQVRPRDVLGIIRTVLFAPEDLALVKGDPGERRRFLDELVTARSPRMAAVRSDYERVLKQRNTLLKSAAMARRHGGRSLDLSTLDVWDQHLARVGAELLAQRLDLIATLLPLADKAYEQLAPGGGPLGLAYRSSAGEPVDSGTARTREALYEVLLAALADVRKQEIERGVTLVGPHRDDLLLRLGDMPAKGYASHGESWSYALALRLASYELLRSEGSEPVLILDDVFAELDARRRERLAELVAPGEQVLVTAAVDDDVPGVLVGTRFGVSGGEVTRL
>NZ_CP020039.1|WP_030383919.1|4225508_4226042_+|DUF721-domain-containing-protein
MNDPGKDPQEGRRTPEASGVDLARQALAAAREQARARGNAAGGKRRQQPGLRSGARADGRDPMPLMAALDRLRTERGWEMPMAVAGVMERWSEIVGPEIAAHCEPQRYEDRELVVRCDSSAWAAQLKLLAPQLVARLNADLGQGTVRMIKVHGPGGRPKGYGPWRAPGSKGPGDTYG
>NZ_CP020039.1|WP_030383918.1|4226475_4228497_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B
MCQKGRFVADSGDSNEKNYDASAIQVLEGLDAVRKRPGMYIGSTGERGLHHLVYEVVDNSVDEALAGHADTIDVTILADGGVRVVDNGRGIPVGIVPSEGKPAVEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTKVAVEVKTDGHRWTQDYKLGVPTAPLAKNEETAETGTTVTFWADGDIFETTEYSFETLSRRFQEMAFLNKGLTLSLTDERESAKATVGADDPDADTAEPTARTVKYYYEGGIVDFVKYLNSRKGELIHPTVIDVEAEDKERMLSVEIAMQWNSQYTEGVYSFANTIHTHEGGTHEEGFRAALTGLVNRYARDKKLLREKDDNLAGEDIREGLTAIISVKLGEPQFEGQTKTKLGNTEAKTFVQKVVHEHLNDWFDRNPVEAADIIRKSIQAATARVAARKARDLTRRKGLLESASLPGKLSDCQSNDPTKCEIFIVEGDSAGGSAKSGRNPMYQAILPIRGKILNVEKARIDKILQNTEVQALISAFGTGVHEDFDIEKLRYHKIILMADADVDGQHINTLLLTFLFRFMRPLVEAGHVYLSRPPLYKIKWGRDDFEYAYSDRERDALVELGKQNGKRIKEDSIQRFKGLGEMNAEELRVTTMDVDHRVLGQVTLDDAAQADDLFSVLMGEDVEARRSFIQRNAKDVRFLDI
>NZ_CP020039.1|WP_053701238.1|4228540_4231147_+|DNA-gyrase-subunit-A
MADETTPTAENPAEEQPVLRIEPVGLETEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMYDGGYRPEKGFYKCARVVGDVMGTYHPHGDSSIYDALVRLAQPWSMRMPLVDSNGNFGSPGNDPAAAMRYTECKLMPQAMEMLRDIDEETVDFQDNYDGRNQEPTVLPARFPNLLVNGSAGIAVGMATNIPPHNLREVAAGAQWALEHPEASHEELQDALIERIKGPDFPSGALVVGRKGIEEAYRTGRGSITMRAVVEVEEIQNRQCLVVTELPYQTNPDNLAQKIADLVKDGKVGGIADVRDETSSRTGQRLVIVLKRDAVAKVVLNNLYKHTDLQTNFGANMLALVDGVPRTLSIDAFIRHWVTHQIEVIVRRTKFRLRKAEERAHILRGLLKALDAIDEVIALIRRSNTVEIAREGLMGLLEIDEIQANAILEMQLRRLAALERQKIVAEHDELQAKINEYNAILASEQRQRSIVSEELAAIVEKFGDDRRSKLVPFDGDMSIEDLIAEEDIVVTITHGGYVKRTKTEDYRSQKRGGKGVRGTKLKQDDLVDHFFVSTTHHWLLFFTNKGRVYRSKAYELPDAGRDARGQHVANLLAFQPDEKIAQILAIRDYEAAPYLILATKGGLVKKTALKDYDSPRSGGVIAINLRETEAGGDDELIGAELVSAEDDLLLISKKAQSIRFTATDDALRPMGRATSGVKGMSFREGDELLSMSVVRPGTFVFTATDGGYAKRTPVDEYRVQGRGGLGIKAAKIVEDRGSLVGALVVDESDEILAITLGGGVIRTRVNEVRETGRDTMGVQLINLGKRDAVVGIARNAEAGQEADEVEADENETEVADGQAAEAAEGTQPSAGEHEE
>NZ_CP020039.1|WP_030383916.1|4231234_4231783_+|DUF3566-domain-containing-protein
MTDTRGPQPAAGADTGEDKPAQPYHPPQAYTAPSGPGTPRGGTGGGAQRKPRPGVRTAPRTRKARLRVAKADPWSVMKVSFLLSIALGICTIVAAVVLWMVMDAMGVFSTVGGTISEATGSNEGNGFDLQSFLSLPRVLIFTSVIAVIDVVLATALATLGAFIYNLSAGFVGGVELTLAEDE
>NZ_CP020039.1|WP_078626072.1|4232002_4232266_+|hypothetical-protein
MGVFVVGPVGGPVGGPGGHRSVSVGVYCWAPEVPYVNERRGRAVKKLLLVALAAIGGLLVYRQIQADRAEQDLWTEATDSVPSGSGV
>NZ_CP020039.1|WP_079405541.1|4232355_4233699_+|hypothetical-protein
MACASKPGVGVMVRGRTTVWAAALGLVAGLPGVAYAEGAAPGPLPTYRAADGARAVEGKPSTADAPLIEAGNVYADTLGPGERVYRLVLDKDESNVYVSAVVRPAAGAKVSGGDGIEVEIMTTAGRSCPGSTGRANFGYDAYPIGAAGVRWGAEDADCAPAGVYYAKVTRTSAKGYDQSPWPLEIKVQREPGRGPGAGPTTAPGSWPSGAPALPGSEPVARSGGTGFNDARALGAGVWRDEMHPGQTRYYRVPLDWGQQLGLSAELAAAKMTKSYGSASGGLTVSLYSPYRGLISDKDVSYDGKQAGVTFDRTPPVAYENRFASDRSVQPVSLAGWYYVAVTMGSKVAEFTEDAAPVPLTLRLEVAGTPAKAPAYRGSPAAGGFGVGDEDRAAAKEGLTAPEAAEAAERHSAMRVVAGAGFGAGTLLLLVLGGWTLLGRRGRGTTAG
>NZ_CP020039.1|WP_079405542.1|4233685_4235017_-|serine/threonine-protein-kinase
MGEVFAGRYELIDPIGRGGAGAVWRAWDHRRRRYVAAKVLLQSDAHTLLRFVREQALRIDHPHVLAPASWAADDDKVLFTMDLVGGGSLGHVIGDYGPLPPRFVCTLLDQLLSGLAAVHAEGVVHRDIKPANILMEATGTGRPHLRLSDFGISMRKGEPRLTETDYVVGTPGYFAPEQLLGAEPDFPADLFAVGLVALYLLQGRKPDSRALVEHFLAHGTPGAPEGVPAPLWDVIAGLLQPDPQSRFRTATGARKALAEAVELLPPPAPDEDPVEVFDQLGPLPPGFGPQGPPERPDRPDPRSTRPATPQPPVPLAAPASATPPAPASTPAPTPASQASPASVTVAAEPTRTDPRATAQSAATGPTAPYPAAPDVPAQVPAYGPSETGSFHLSPPTVPVPAPPAGPPVRAGGRIAPPPPKAVASLLAAALLCFAVGVWALTQL

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Crispr_ID: NZ_CP020039_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_12

4363085-4363586

Orphan

Consensus_repeat	Method
CNNCNGCGGCGACCGGCTC	CRT

7 spacers

csa3

The CRISPR arrays of NZ_CP020039_12

>merge|NZ_CP020039|12|4363085-4363586|CRT
CAGTAGCGGCGACCGGCTCCGCCGGGGCGTCCTGCGCCTCCGGCGCGGTGGCTTCGGCGGCCACGGGCTCGGCCTGCGGCGCCTCGGCCACGGCCTCTTCCGCAGCGGCGCCGACCGGCTCCGCGGGAGCGTCCTGCGCCTCCGGCGCGGTGGCGGGGTCCGGCTCGGGGGTGGCCTCGTGCTGTTCCGCAGCAGCGGCGACCGGCTCGGCCTGGGCTTCCGCCTCGGGGGCGGCCTCGGCCTGCTCCGCAGCGGCGACCGGCTCCGCGGGAGCGTCCTGCGCCTCCGGCACGGTGACCGGCTGCGCCTCGGCGGCGACCGGCTCGGCCTGGGCTTTCGCCTCGGGGGCGGCCTCGGCCTGCTCCGCAGCGGCGACCGGCTCCGCGGGAGCGTCCTGCGCCTCCGGCGCGGTGGCCTCGGCGGCAACCGGCTCCGCCTCGGTGGCGACCGGCTCGGCCTGGGCCTTCGCCTCCGGTGCGGTGGCCTCGGCGGCCACGGGCTC

>NZ_CP020039|12|2|4363085-4363586|CRT
CAGTAGCGGCGACCGGCTC	CGCCGGGGCGTCCTGCGCCTCCGGCGCGGTGGCTTCGGCGGCCACGGGCTCGGCCTGCGGCGCCTCGGCCACGGCCTCTTCCG
CAGCGGCGCCGACCGGCTC	CGCGGGAGCGTCCTGCGCCTCCGGCGCGGTGGCGGGGTCCGGCTCGGGGGTGGCCTCGTGCTGTTCCG
CAGCAGCGGCGACCGGCTC	GGCCTGGGCTTCCGCCTCGGGGGCGGCCTCGGCCTGCT
CCGCAGCGGCGACCGGCTC	CGCGGGAGCGTCCTGCGCCTCCGGCACGGTGACCGGCTGCG
CCTCGGCGGCGACCGGCTC	GGCCTGGGCTTTCGCCTCGGGGGCGGCCTCGGCCTGCT
CCGCAGCGGCGACCGGCTC	CGCGGGAGCGTCCTGCGCCTCCGGCGCGGTGG
CCTCGGCGGCAACCGGCTC	CGCCTCGGTGGCGACCGGCTCGGCCTGGGCCTTCGCCTCCGGTGCGGTGG
CCTCGGCGGCCACGGGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_079405598.1\|4366416_4367706_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP020039.1\|WP_107470196.1\|4362347_4363013_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|378410
NZ_CP020039.1\|WP_079405594.1\|4355935_4356928_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP020039.1\|WP_053167338.1\|4352248_4354075_-\|butyryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173842
NZ_CP020039.1\|WP_079405599.1\|4368548_4370543_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130728
NZ_CP020039.1\|WP_079405593.1\|4354744_4355704_+\|helix-turn-helix-domain-containing-protein	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP020039.1\|WP_079405595.1\|4356934_4358008_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP020039.1\|WP_158720997.1\|4373094_4373265_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_053167340.1\|4351295_4352024_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079407964.1\|4371577_4372051_+\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP020039.1\|WP_079405603.1\|4373323_4373701_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_030383806.1\|4360442_4362266_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
NZ_CP020039.1\|WP_079405597.1\|4364201_4366292_+\|PhoX-family-protein	unknown	unknown	gnl\|CDD\|253386
NZ_CP020039.1\|WP_030383814.1\|4349901_4351194_-\|M18-family-aminopeptidase	unknown	unknown	gnl\|CDD\|235073
NZ_CP020039.1\|WP_079407963.1\|4367693_4368338_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079405602.1\|4372607_4373012_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079405596.1\|4358059_4360285_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP020039.1\|WP_079405600.1\|4370625_4371453_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079405601.1\|4372142_4372541_+\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100004
NZ_CP020039.1\|WP_030383811.1\|4354247_4354706_+\|SseB-family-protein	unknown	unknown	gnl\|CDD\|377787

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_107470196.1\|4362347_4363013_-\|VWA-domain-containing-protein	gnl\|CDD\|378410	pfam10138, vWA-TerF-like, vWA found in TerF C-terminus. vWA domain fused to TerD domain typified by the TerF protein. Some times found as solos.	3.50301e-45
NZ_CP020039.1\|WP_079405594.1\|4355935_4356928_+\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	9.52384e-64
NZ_CP020039.1\|WP_053167338.1\|4352248_4354075_-\|butyryl-CoA-dehydrogenase	gnl\|CDD\|173842	cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogenases similar to fadE5. Putative acyl-CoA dehydrogenase (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	0
NZ_CP020039.1\|WP_079405599.1\|4368548_4370543_-\|hypothetical-protein	gnl\|CDD\|130728	TIGR01667, Uncharacterized_protein_HI_1680, integral membrane protein, YccS/YhfK family. This model represents two clades of putative transmembrane proteins including the E. coli YccS and YhfK proteins. The YccS hypothetical equivalog (TIGR01666) is found in beta and gamma proteobacteria, while the smaller YhfK group is only found in E. coli, Salmonella and Yersinia. TMHMM on the 19 hits to this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane.	3.03613e-37
NZ_CP020039.1\|WP_079405593.1\|4354744_4355704_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	4.75176e-11
NZ_CP020039.1\|WP_079405597.1\|4364201_4366292_+\|PhoX-family-protein	gnl\|CDD\|253386	pfam05787, DUF839, Bacterial protein of unknown function (DUF839). This family consists of several bacterial proteins of unknown function that contain a predicted beta-propeller repeats.	0
NZ_CP020039.1\|WP_079405595.1\|4356934_4358008_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.04686e-48
NZ_CP020039.1\|WP_079405601.1\|4372142_4372541_+\|RidA-family-protein	gnl\|CDD\|100004	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	1.52653e-21
NZ_CP020039.1\|WP_030383806.1\|4360442_4362266_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
NZ_CP020039.1\|WP_079405598.1\|4366416_4367706_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.69338e-34
NZ_CP020039.1\|WP_030383814.1\|4349901_4351194_-\|M18-family-aminopeptidase	gnl\|CDD\|235073	PRK02813, PRK02813, putative aminopeptidase 2; Provisional.	0
NZ_CP020039.1\|WP_079405596.1\|4358059_4360285_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	1.92479e-47
NZ_CP020039.1\|WP_079407964.1\|4371577_4372051_+\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	2.93192e-34
NZ_CP020039.1\|WP_030383811.1\|4354247_4354706_+\|SseB-family-protein	gnl\|CDD\|377787	pfam07179, SseB, SseB protein N-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This entry contains the presumed N-terminal domain of SseB.	0.00180079

>NZ_CP020039.1|WP_107470196.1|4362347_4363013_-|VWA-domain-containing-protein
MEGPAQALAVVKRRAPEVVGAYKAVGQVLRSKGKAGARAKVYLVLDRSGSMRGFYKDGSAQHLADHALALASHLDDAATVHTVFFSTEVDGTADLTLDGYDAAWVEARHAELGRMGRTSYHVAVEAVLERYQKDGGEGPALVVFQTDGAPDNRQPARQALADAATAAPGVHWQFVAFGDHDSKAFDFLRKLDAENAGFFHAGPAPAELASAALAKGILEQF
>NZ_CP020039.1|WP_030383806.1|4360442_4362266_+|aspartate--tRNA-ligase
MHRYRSHTCGELRASDVAADVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAANEALSSVTKETVVRIDGKVVSRGADNVNPELPTGEIEIEVSAVEVLGAAAPLPFTINTDDGVNEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDFVVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFVEQEDVFQPIERLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELVDITDVFEGSEFKAFAGKHVRALAVPDTAAQPRKFFDGLGEYAISLGAKGLAWVRVGEDGSLTGPIAKFLTEENLKVLTERLGLVPGHAVFFGAGEFDEVSKIMSGVRVEAAKRAGQFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDPLDILAWQYDIVCNGIELSSGAIRNHEPEVMLKAFEIAGYEAETVEREFAGMLRAFRLGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLEEARLRELNIALRKPVETKAAERPVSDAVKPDAGSPRG
>NZ_CP020039.1|WP_079405596.1|4358059_4360285_-|SpoIIE-family-protein-phosphatase
MRTEDVLAAIATGLWRWDNASGTVTLDSEAARLLGLPAEPVVLPEVAVRSRFHPVDWNEINGIVNLAVAEGTLAEARLRIMDVDGRVLRTVRSRSKPVENRAPDGSTDYELIGTIQEIAEPQPGTTAAHTPITGDWRRSREAFLLDAGRALAEARSTAEVLRVAASLSMPGFSPDGLAVFGLAGDRLSLIGHHGHDPGDEGTFSDMPLETDYPAAEVVRTGRAIYLATPDDYKRRFPAAWPLAQRFDRVSWAFLPLIVAGRTMGAWMAAFKHPASFSPDERSVLTTVARMLAQALQRAGVAESERELTTGLQRSMMPQLGPEIPGMRIAARYVPTGGGLQVGGDWYDMIPLPSGRFALVIGDVQGHDVRAAGLMGQLRIAVRAYASEGHRPDAVLSRASRFLAGLCSSQESDPSGDAGGQDSDFHSPRFATCLYVECDPGTGLLEVARAGHPDPAIRMADGTVLMRPTAGGLPLGIVPDTDYPTTRFTLEPGETMMLCTDGLIETGGHDLDTGWARLRAVLESDAHESEPAAPQAAAQLGDPHFGTPHLERLADLLVQAVHGPSSHHTTGPLADRREDDIAVVLLCRESAHLGRGPAPAHPARPARRTVLTVAQVEPERIAGARQQIRELLHDWADPDQVDSAVLMVSEMVTNVLTHTDGDALLVAEAVGELGARRLRVEVADGSDELPHRRQPGEMSSSGRGVLLMEMLADTWGVDPRGEGKSIWFELHEQSKTVADPEF
>NZ_CP020039.1|WP_079405595.1|4356934_4358008_-|AI-2E-family-transporter
MSNPSDHLLPEPVRRLAAWCGVVLLVTAVLAVGIWLCTVFEAAVTPVLLAVLGTALLGPMHRRLVRMKMNRSLAAALTCLAVVGVVGGATYVVVLALIETGGQIVDSLRRAGELVAEHFGAVGTSLEDIAANSKDLLAKFGSTAASGVVTGLSAVGSMIAMVLLAMVLIFFFLRDSDRAVGTLRSLVPNRSGDLMEAMGRRAFEAVEGFMRGTTFVALVDAVLIGAGLLVLDVPGALGLAALVFVTAYIPYLGAILSGAVAVLVAFADRGWVIGLWALGLVLLVQMIEGYVLQPVVQSRTVQMHPAVVMLAITAGASVAGILGMLLAVPLTAAVFGVISELRARYAVETAPGPEGSA
>NZ_CP020039.1|WP_079405594.1|4355935_4356928_+|pirin-family-protein
MPAVTVENPLTLPRVAEPQAAVPRKVLAVVSAPGGFEGEGFPVRRAFAGINYQYLDPFIMMDQMGEVEYAPGEPKGTPWHPHRGFETVTYLIDGTFVHQDSNGGGGIINGGDTQWMTAGSGLLHIEAPPESLVVSGGLFHGLQLWVNLPASDKMMPPRYQDIGGGQVQLLTTPDGGSLLRVIAGELDGHQGPGITHTPITMIHATVSPGAQITLPWREDFNALAYVMAGRGSVGADRRPLRTGQTAVFGEGGSLTVRADESQDSNAPDLEIVLLGGRPIREPMAHYGPFVMNSQHELQQAFDDFQAGRLGRIPTTARTGLGHRGAGDADS
>NZ_CP020039.1|WP_079405593.1|4354744_4355704_+|helix-turn-helix-domain-containing-protein
MLRMHFTAEDLLGIRFAADPLPLVELAMALVAWQRTDEPAVFGRWRARAGQELTGRVRPLLDLLRPDGDNPQFIEPYARTLDEGLAAVREAAPRLTGEQLARAAARAPGPDSWLRALWRHDPAAWDQLDGAIRSGHEALVAPHWARIRQSFRADVAWRTRLLAAHGIKACLASTHPAARWSGTVFEVARPPHYEVHLGGRGLMLMPSPFWTGRPLVAGHPDGPHVLLYPALTPLPLTAPGPAEGPLDALLGRTRAAVLQLLVSRRTTSELARDLDISLPSVSEHTRTLRAAGLITTERDGKAVLHSVTGLGVDLLHSGG
>NZ_CP020039.1|WP_030383811.1|4354247_4354706_+|SseB-family-protein
MYGYDQNPGAQQQYAQQPPQGYAQQAPPLYPEPSPPSLGDAVRAFTTGSLSAEDFQQIFAGSKVYCPRGDTPGFLALHNTQQPVIPMFTTLKELRRYAGKESKYFVITGAEVIDLLPTGYGFVLDMEGDHRMVFDAKAVEQMVDFAMRRMYG
>NZ_CP020039.1|WP_053167338.1|4352248_4354075_-|butyryl-CoA-dehydrogenase
MGHYKSNLRDIEFNLFEVLGRDKQYGTGPFEEMDTETAKSVLSELARLAENELAASFEDADRNPPVFDPATNTAPVPASFKKSYEAFMDSEYWRLGLPEEIGGTTSPRSLIWAYAELLLGSNPAIWMYSSGPAFAGILFEEGNEAQKKVAQIAVEKRWGSTMVLTEPDAGSDVGAGRTKAIQQADGSWHIEGVKRFITSGEHDMEENILHYVLARPEGHGPGTKGLSLFLVPKFHFDWETGELGERNGVYATNVEHKMGLKASNTCEMTFGDQHPAKGWLIGDKHDGIRQMFMIIEFARMMVGTKAIATLSTGYLNALEYAKERVQGPDLANFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVLYTASVQDEIQVKQAAGEDASAEIGLNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPIEQYIRDAKIDTLYEGTTAIQGQDFFFRKIVRDQGASLNVLSETIKKFLAEAVGGEELAGARDALAKAAVDLEAIVGQMIVDLTATGEDVKNIYKVGQNTTRLLMASGDVVVGYLLLKGAAVAAEKLATAAPKDVPFYTGKIAAAKFFASQVLPNVSVQRQLAEVVDNSLMELDEAAF
>NZ_CP020039.1|WP_053167340.1|4351295_4352024_-|hypothetical-protein
MSPQDQHGSRGYSVPTGRPYALKELQASLGSLGDHLRELYDGAHPAEYDGIADALYVAFQTAAGLAPAKSYTGCPEHPNGALDPEAPEGWGRCLICNDRRRLGQRRHGGPAAAPAGEQRRLGYPVPDPPYTLEVLRTHLRTVEDQRFHLSLSSPAEDFVRIADDLHRSFIVARELSRPRNASGCNEHPGAPIDPDAPPGEACIFCAGRRRRAQRSPQTPEMLPRIRRGERRQLQRRFERPPG
>NZ_CP020039.1|WP_030383814.1|4349901_4351194_-|M18-family-aminopeptidase
MSSPARFDRGHTDDLMTFLTASPSPYHAVANAAERLEKAGFRQLSETDAWDAGTGGKFVLRGGALIAWFVPEGAAPHTPFRIVGAHTDSPNLRVKPLPDTGSQGWRQIAVEIYGGTLLNTWLDRDLGLAGRLTLRDGTERLVNVDRALLRVPQLAVHLDRSVNSDGLKLDKQRHMQPIWGLGDVQEGDLIAFLEEEEGLDQGSVAGWDLMVHSIEPPSYLGRDRELVAGPRMDNLLSVHAGVAALAAVSTADKLDHIPVLAAFDHEENGSQSDTGADGPLLGNVLERSVFARGGSYEDRARAFAGTICLSSDTGHAVHPNYGERHDPTHHPRANGGPILKVNVNQRYATDGSGRAVFAAACERAGVPWQTFVSNNSMPCGTTIGPITAARHGIQTVDIGVAILSMHSARELCGADDPYLLANALVAFLEG
>NZ_CP020039.1|WP_079405597.1|4364201_4366292_+|PhoX-family-protein
MRKLLPFIGNPHGSGRSALTCRYRCGDACFHEVPNTSDNEYVGDVIARAYSRRSMLRSAAVVTVATAAGSAVAFGGSGQTANATPSADAAAGAGAGKSGEAARGLRFKAVAPNTDDKVTVPEGHDQNVVIRWGDPIIKGAPGFNPDKQTAAAQAGQFGYNNDFLSLLPLGGDYERQQLLVANHEYTDEVLMFKAYDPANPTREQVEIAWAAHGLTVVAVQEDHRSGKLTAVGRHQLNRRLTATSEFRLTGPAAGSSLLKTSVDPTGTKVLGTLNNCAGGTTPWGTTLHGEENFNQYFANAGQVTEPTQAARLKRYGMTTGASERKWERFDKRFDVAQEPNESHRFGWVVELDPYDPHSVPRKRTALGRFKHEAAQPRLTEDGRPVIYMGDDERFDYFYKFVSSKQMKKGNSRAAKEHNLTLLDEGTLYVAKLTGDSPAAELDGTGKLPNDGEFDGSGVWIKLATGNVSHVEGMTAEEVYVFTRQAADKVGATKMDRPEDVEPSPRTGRVYIALTNNTDRGKPGKEVATEANPRNLNKHGQILELAENFDDPAGDGFAWRLFLVAGDPNDPATYFAGFPKDKVSPISCPDNVAFDPHGNLWISTDGNQLGSHDGLFGVATAGERRGELKQFLTVPRGAETCGPLIQDKRVLVSVQHPGEIDGASVEKPQSVWPDGPGKIVRPAVVSVWRKDGRNIGV
>NZ_CP020039.1|WP_079405598.1|4366416_4367706_-|HAMP-domain-containing-histidine-kinase
MRALSSLRWKIALTTTMVCCMVAAALGILVHNVVARQMVGEVRKAAATELAHALGHYEYGTAHGDVNAVFDPADLPRPLRELVARGQTGSMVGLEQGKPVMWAAGPADDKALAVWLPFGSTRARLRDIDTAILASAVLAAGVVALAGLFLADRISRRLATTAAVARRISAGDLDARVNFPAEGEDPGPRGSRDEVRDVAHALDSMAASLQARLEAEKRFTADVAHELRTPLTGSLAAAALLPDGRPKEMINNRLRALHLLTEDLLEISRLDSGVERADLARVELGRVVERAVAGAAGAGPASSEAGPAASVQVVQDMVVVTDRRRLDRILANLLANAGKHGRPPVEVTVDGPVVAVRDHGAGYPPELIERGPQRFRTGDPGRGRGHGLGLTIVMGQAAVLEIEVSFTNAPDGGAVTTLRLPVGRVPTGD
>NZ_CP020039.1|WP_079407963.1|4367693_4368338_-|hypothetical-protein
MEGLQSEGDLGTVHAPKSLWKDIRPDPPAADQKPGTAAVVPGLPKVSDLSMRGVNPLSVVRADITSATEQDGGTGRLVDPRAVQRLALCTQAVDGGPDCPVRPAVLHDLTGNGREELITALDIDGRLSELRVYTVQDDGSIARILSRRAVLEGVEVAAEHLAVREPTTNPDYVAVSDYVWDPKAGIMNLSQLTLDDCPGLTQTPPDGNGARCAR
>NZ_CP020039.1|WP_079405599.1|4368548_4370543_-|hypothetical-protein
MSTERTEHIASRRARHRPLAPPSWLLNGLKPSAAPIPWAAVVRASIAMAVPLAVGFALDEPEYGALASMGALAGVIGDTADAYRMRVLNIAVPQLFGAIGVALGTLVYGHGWLAVAVLTLIALVSGMISSIGTVASVSGLLLLLNAVIGAGLPLPEPWWTAPLLLTAGGLFVLALTLLGWPLRRRQPERTAVADTYRALADALEAAGGPGALYEERRHQVTQAINHAYDLVLGRRARVHGRSPSLVRLLAQLNVVIPLVEAAPAAHLRGRPLPPEIPAAVRELADAVEEGRTGTPVLDLPAAHTPAERAVDAALRHAAKIVHVARPDLDNVDDRLGRPAALRVRARRAVRDMVLSRASWRYGLRLALCIGIAQSLVSVIEFERSYWVALTVTFVLKPDFGSVFSRAVLRALGTAGGLVVAAAVLAEVPRGWWDVPVMVVLAGLIPAFSVKGYAFQTAAITPVILLLSDLLNHQGFDLIRPRLVDSLIGCAITLVAGYLLWPESWHTRIGDRLADTVDDAARYVERAFAPVVDEAALAAARTSRLQARRRIYRDLSGVRSEFQRALTEPPPTGARAAAWWPLVVAVERIVDATTAARVRVNHGAAPPPAEEVETIAHHLRELAVRVRSSSTPVRVDAGPAGGDTSVLAPVHQEIAAALAITRPES
>NZ_CP020039.1|WP_079405600.1|4370625_4371453_-|hypothetical-protein
MRTILSAVLIVLVALLVPASAVAYWADRELGNADRYTAAMSPLAENPKVQEVVVTQVTRALARQIDAGPFQTGVDTLLGEALRSFAGTDAYRTAWDAANRAAHAAFLDALTTGHGDALTIDLAPVIAQVRDDLIADDVPFADRIPVTHLTVKVMEYDNLGALRKGFHMLEVAGVWLPVLTLLLAATAIAVAVHRRRAVIATGLGLAVGAVLLWLAVDVCRRLTLDDLPADIDRPAAGAVYDALTAYLRTTAWVVLLIGLAAALAAWVMGRLRRTP
>NZ_CP020039.1|WP_079407964.1|4371577_4372051_+|Rrf2-family-transcriptional-regulator
MSEGVEWALHSCVNLAWSGPDQAVSAARLAAWHDLPAAYLNKQLQALARAGIVTSTPGPRGGFRLARPLKAISLMDVVAAVEGPEEAFRCAEIRQQGPGAGAPAAYTADCAIAHAMTRAELAWRRALAAQNLDEIRQQAERQAPEAPERLRAWLAAR
>NZ_CP020039.1|WP_079405601.1|4372142_4372541_+|RidA-family-protein
MTRSIINPAGLHTPTDYGYSHIVSAPGEQVFIAGQYGSDEHGHVVSEDFADQVEQAFANLRTALAAVGLGPGDVVRIGTYIVGHDQRKLEILLKQLHATWGTELPAQTLIGVAALALPSMLFEIDAVAVRTP
>NZ_CP020039.1|WP_079405602.1|4372607_4373012_+|hypothetical-protein
MAHAAPSAYGRHRQSADMTHLSKGAYARPLLLGLVYGVWAAFMKRQMGPVDAGNVFYGILCGVLFAGIMFTLARIGPRLKREVHAAAYGAFGGIAVGYLHSLTDQSILKSVVVGLAVAAGVGAIAFYRYYTHED
>NZ_CP020039.1|WP_158720997.1|4373094_4373265_-|hypothetical-protein
MPIDPYAALNAMLRAEVTRFSPPVRQTEPAASPKATATSVEAESEPQQNATADSAA
>NZ_CP020039.1|WP_079405603.1|4373323_4373701_-|hypothetical-protein
MSGRHDARSALTRALTVACVVLLCVFGAGPAGAAAAEFRPAAGAAGMPAAPAESPEPGEGQSDPAPDPESRAAVRTVTRGLPVVRRAAIRVFHVKHPDRPSCGPTAEAAEPPLSRRTVRSVVLRC

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Crispr_ID: NZ_CP020039_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_13

4562963-4563046

Orphan

Consensus_repeat	Method
GCGCCTCAAACGCCGGCGGGGCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_13

>merge|NZ_CP020039|13|4562963-4563046|CRISPRCasFinder
GCGCCTCAAACGCCGGCGGGGCTGATCAGGCCGGGCCGGATCAGGCGGGGTGGGGTGGGTGCGCCTCAAGCGCCGGCGGGGCTG

>NZ_CP020039|13|11|4562963-4563046|CRISPRCasFinder
GCGCCTCAAACGCCGGCGGGGCTG	ATCAGGCCGGGCCGGATCAGGCGGGGTGGGGTGGGT
GCGCCTCAAGCGCCGGCGGGGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_107089400.1\|4563092_4564274_+\|DUF2786-domain-containing-protein	unknown	unknown	gnl\|CDD\|378525
NZ_CP020039.1\|WP_053175749.1\|4569103_4570561_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143469
NZ_CP020039.1\|WP_078626027.1\|4567295_4567805_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP020039.1\|WP_159395628.1\|4559817_4561071_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_051778785.1\|4568135_4569014_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262
NZ_CP020039.1\|WP_030383576.1\|4566938_4567184_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP020039.1\|WP_078938260.1\|4570622_4572710_+\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|274573
NZ_CP020039.1\|WP_030383578.1\|4564468_4564657_-\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|234797
NZ_CP020039.1\|WP_079405711.1\|4561119_4562835_-\|bifunctional-3'-5'-exonuclease/DNA-polymerase	unknown	unknown	gnl\|CDD\|237876
NZ_CP020039.1\|WP_079405706.1\|4554515_4555355_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079405713.1\|4572812_4573325_+\|DinB-family-protein	unknown	unknown	gnl\|CDD\|368218
NZ_CP020039.1\|WP_030383582.1\|4559200_4559716_+\|SigE-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|132028
NZ_CP020039.1\|WP_030383630.1\|4551230_4552442_+\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|236134
NZ_CP020039.1\|WP_079405708.1\|4557081_4558338_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP020039.1\|WP_079405709.1\|4558535_4559093_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP020039.1\|WP_079405712.1\|4564773_4566819_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130728
NZ_CP020039.1\|WP_053175756.1\|4573348_4573978_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP020039.1\|WP_079405705.1\|4552647_4554213_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|312032
NZ_CP020039.1\|WP_079405704.1\|4547863_4551160_+\|dTMP-kinase	unknown	unknown	gnl\|CDD\|234814
NZ_CP020039.1\|WP_079405707.1\|4555365_4556916_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|379140

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_107089400.1\|4563092_4564274_+\|DUF2786-domain-containing-protein	gnl\|CDD\|378525	pfam10979, DUF2786, Protein of unknown function (DUF2786). This family of proteins has no known function.	2.98546e-12
NZ_CP020039.1\|WP_053175749.1\|4569103_4570561_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143469	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.	0
NZ_CP020039.1\|WP_078626027.1\|4567295_4567805_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	4.67628e-21
NZ_CP020039.1\|WP_053175756.1\|4573348_4573978_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	4.64963e-10
NZ_CP020039.1\|WP_030383576.1\|4566938_4567184_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	8.15429e-20
NZ_CP020039.1\|WP_078938260.1\|4570622_4572710_+\|penicillin-binding-protein-2	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP020039.1\|WP_079405711.1\|4561119_4562835_-\|bifunctional-3'-5'-exonuclease/DNA-polymerase	gnl\|CDD\|237876	PRK14975, PRK14975, bifunctional 3'-5' exonuclease/DNA polymerase; Provisional.	0
NZ_CP020039.1\|WP_030383582.1\|4559200_4559716_+\|SigE-family-RNA-polymerase-sigma-factor	gnl\|CDD\|132028	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family. This group of similar sigma-70 factors includes the sigE factor from Streptomyces coelicolor. The family appears to include a paralagous expansion in the Streptomycetes lineage, while related Actinomycetales have at most two representatives.	5.92503e-46
NZ_CP020039.1\|WP_079405713.1\|4572812_4573325_+\|DinB-family-protein	gnl\|CDD\|368218	pfam04978, DUF664, Protein of unknown function (DUF664). This family is commonly found in Streptomyces coelicolor and is of unknown function. These proteins contain several conserved histidines at their N-terminus that may form a metal binding site.	9.69393e-47
NZ_CP020039.1\|WP_051778785.1\|4568135_4569014_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	1.85096e-08
NZ_CP020039.1\|WP_030383630.1\|4551230_4552442_+\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|236134	PRK07940, PRK07940, DNA polymerase III subunit delta'; Validated.	0
NZ_CP020039.1\|WP_079405708.1\|4557081_4558338_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	8.26456e-57
NZ_CP020039.1\|WP_030383578.1\|4564468_4564657_-\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|234797	PRK00575, tatA, Sec-independent protein translocase subunit TatA.	2.10266e-21
NZ_CP020039.1\|WP_079405712.1\|4564773_4566819_+\|hypothetical-protein	gnl\|CDD\|130728	TIGR01667, Uncharacterized_protein_HI_1680, integral membrane protein, YccS/YhfK family. This model represents two clades of putative transmembrane proteins including the E. coli YccS and YhfK proteins. The YccS hypothetical equivalog (TIGR01666) is found in beta and gamma proteobacteria, while the smaller YhfK group is only found in E. coli, Salmonella and Yersinia. TMHMM on the 19 hits to this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane.	2.12567e-24
NZ_CP020039.1\|WP_079405705.1\|4552647_4554213_+\|alpha/beta-hydrolase	gnl\|CDD\|312032	pfam08386, Abhydrolase_4, TAP-like protein. This is a family of putative bacterial peptidases and hydrolases that bear similarity to a tripeptidyl aminopeptidase isolated from Streptomyces lividans. A member of this family is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterized from Propionibacterium freudenreichii.	1.11579e-31
NZ_CP020039.1\|WP_079405709.1\|4558535_4559093_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.41436e-12
NZ_CP020039.1\|WP_079405704.1\|4547863_4551160_+\|dTMP-kinase	gnl\|CDD\|234814	PRK00698, tmk, thymidylate kinase; Validated.	3.55923e-79
NZ_CP020039.1\|WP_079405707.1\|4555365_4556916_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|379140	pfam13360, PQQ_2, PQQ-like domain. This domain contains several repeats of the PQQ repeat.	8.79691e-06

>NZ_CP020039.1|WP_079405711.1|4561119_4562835_-|bifunctional-3'-5'-exonuclease/DNA-polymerase
MSDRTPRWALAEDGDGWWHAAPVPPADGVRLRVRDPAEAIRAAPPGTRWVWRSTAAVYPRLLAAGTRVERCHDIEGAELLLLGHEGRSGEPRSAAAAWARLTHTPVPPDPRPRAAEPRAQDSLFDPQPTPVPLDALLAIHADQAKRLDATDRPDRMRLLIAAESAAFLVAAEMNRAGLPWRVDVHRALLTELLGERYAGGGEPRRLAELADRVSAAFGRRVRPDLPADVIKAFAGAGIKLKSTRRWEIQELDHPAVEPLIEYKKLYRIYTAHGWSWLADWVRDGRFRPEFIPGGTLTGRWVTNGGGALQIPKVIRRAVVADPGWRLVVADADQMEPRVLAAISRDPAFMEVAGETTDLYTAVSRQGFSGDRDKAKIAVLGAVYGQTSGDGLKNLAALRRRFPLAVAYVDDAAKAGEEGRLVRTWLGRTCPPPAGSGERDETGDGGVDPGEGYGEGEAAAPPDREDGWTPSYASTNTRARGRFTRNFVVQGSAADWALLLLAALRQATAGMRAELVFFQHDEVIVHCPAEEAEAVVEAIRAAGDRAGRIAFGDTPVRFPFTTAVVECYADAK
>NZ_CP020039.1|WP_159395628.1|4559817_4561071_+|hypothetical-protein
MPFEDELGAALRRTGEGFTTDRHALVDAGEQRGRRMVARRRAAVVGGSALALAVIATAGAYTGGLFDGTDTAHRADVAAPPTGPGRNGEQPRTSTGTVTAEQLIANLKSLLPGGELTGAEARGTSDELGPWVSGVYDDGKGKSAVSVRLQRVDPNGNLARDQTECGDKSVQGYDDCRTEQLADGSRLMLHKGYEYPDRRVDTKVWSATLVTPQGFMVGASEWNAAAEKDAPVSRPDPPLATEELKTLVISTLWHPALNDLPTVEPEAPQEQSPTALRDRNAGAALEHLITGLGVKTPIVAKGGQGGSGYVVLDDGSGRSLVQITIQQGGEGEAGFTAADATVRPDGTKVKAMVGRATKGKDVMQWSVDTLREDGLRVLVSSFNGADPNGTPTRDSPALTLGQLHEIALAPGWNRTHN
>NZ_CP020039.1|WP_030383582.1|4559200_4559716_+|SigE-family-RNA-polymerase-sigma-factor
MRHGRGSGFREFAAGRSGHLYRSACLLASGDTHLAEDLVQETLGRMYLRWGRISRIDNPAAYAQTVLVRAFLTHQRRRSAGERPVGAVPDPGAPAPGGEDPALRLTLLEALGRLAPKDRAVLVLRYWEDRSVEETADAMNTSSAAVRTRTSRALARLREQLGGSLSAFADL
>NZ_CP020039.1|WP_079405709.1|4558535_4559093_+|GNAT-family-N-acetyltransferase
MNGQAQAAAQQDVPSPAVDSTPAPAPAAAPASASGPAVSVRAAGEADVDAAAVLFRGYLDFYEVDIEDPDAPRAFLAERIAKDESLVLLADVPEAGTVGFAQVYRGFSSLSLRTAWVLNDLYVAPEGRRTGAGRALLREVLRRAREAGVSGVQLETAYDNTVAQGLYEAEGFVREEFHVYFHDLG
>NZ_CP020039.1|WP_079405708.1|4557081_4558338_+|serine-hydrolase
MRTRWRSAAVGAAAVGLVAGLGVGPVGPAAAAVYGPDAAAHAPTMTAAAPTPTPTPTPTPASDGFAQLTPAVTRQLDDAIRKVLAEAKIPGVIVAVSAPGKGEYIRSFGVADKATGAPMTPNLNMRIGSVTKTFTVTALLELVDDGKVGLDDPIGKYVDGVPNGDRITLRELAGMRSGLFNYSADEGFYKALTSNPERPFTPQELLDYSFKHPVLFEPNAKFYYCNTNLILLGLVVEKVSGVPLGRFIEREVVAPAGLKHTVFPTGPEFPEPHAQGYTNQTASGKIENSTDWNPSWGWAAGAMISDLPDLRSWAKTLATGTLLTPATQAQRLDVVDAIPGAGYGLGIFNVQGWIGHNGSLPGYGSLVLYLPQARATLVVLLNTDIGYEGQEPSTLFGEAITKIVTPGRVYSLPAQPPS
>NZ_CP020039.1|WP_079405707.1|4555365_4556916_-|PQQ-binding-like-beta-propeller-repeat-protein
MTGRTPGARPEPDAQEPVGFGPPPAPFGPDQGPRPRPRPRSRSAGAVAAVVAALLLIGGGAYGLTVRAGVGVPDPPAAGPSGSPSVDQGDGNGPGGTPAAYDPNAGIRPGEARVWLRDNQAEVAGSGTSQYGPWRVGATVVAAISNGLTAYAVADGQEKWKLPLQTPLCGVPPAPSATGVLVVAVKETASDTSRCTHLQQIDLTTGKAGWKVPVPRENEHDTSVEFELAISGDTVAVARPAVMSGFSVTDGRKLFGTSKTNGCYPSAFAGGSRLIGIRHCPDPNDTRGSGQAMVEELDPATGSARWSHKYDPDWTVGRVLSMDPLVIAAHHKDKKTWNIKAFAADGTVRSQTNPGFGVSGRCNGFGNASGFQECYAAAADADTLYLGAGKPGTSLGIDDTNQVVAVDLNTGKERWRSAEQPKGRTMWPLAVEGGRVVVYVSPGSAGEAGAVVSLAAADGAAQPVLQSPAAAAGAQGVFYPHGLRTAWADGRLFLLNGRVYSPEPRKASRAILSFGK
>NZ_CP020039.1|WP_079405706.1|4554515_4555355_-|hypothetical-protein
MQNPYQEPDRPGDLYRPPPFHPQQQPGGAGGRKSRKKIVAGVCALTALAVTAAATGVVLGVRENRARERAIPPASAADPTKPQVAGWKTVVNPEHGTAFDVPPQWEVLEPTVFSGYTDDKDPDKVLIGHTAPAFYKSKWCSIDADGDGQFSDVRLANTGTKGAAGAKTAEEIAEKEAPTWVYAAYTQPDKSVVKTDKPVAYTTKSGVRGSYVKARSKGAARTDHCAGDGQAVVFGFKNSRGDFVSWDFYGRTGVPGAVEDALIMRVLSTVRLAGTPKER
>NZ_CP020039.1|WP_079405705.1|4552647_4554213_+|alpha/beta-hydrolase
MDTHRLLRTTGTVIAATGLLLSGCTSGGSGEPRAAASSTPEAPPSAQPSATAAALRPYYAQKLTWRECGVPGFECSTMKAPLDYANPGSGQDVDIAVARRKATGPGKRLGSLLVNPGGPGGSGIGYLQAYAGIGYPAAVRAQYDMVSFDPRGVERSNPVECLDGPAMDKYTQVDQTPDDAAERAELVAAFKEFAAGCEKNAQRVLPHVSTVEAARDMDLLRAVLGDEKLNYVGASYGTLLGATYADLFPDRVGRLVLDGAMDPARPALELNRDQTEGFETAFTSFAKDCAKQADCPLGKGDPDAVAARLKEFFRKVDAQPVPSGDPKRPLGESLATTGVIAALYDESAWPQLREALSSAMNGDGSGLLGLADSYYEREADGKYANLMFANAAVNCIDQPPAFTGPEAVDSALPSFEKASPVFGAGLAWASLNCTYWPVKVTGKARELTAKGAPPIVVVGTTRDPATPYKWAQALAGQLDSGTLLTYDGDGHTAYGRGSDCIDTAINRYLLEGKPPEANKKC
>NZ_CP020039.1|WP_030383630.1|4551230_4552442_+|DNA-polymerase-III-subunit-delta'
MPVWDDLVGQERVQKQLAAAARDADALVTAITDGTAPPPASKMTHAWLFTGPPGAGRSTAARAFAAALQCTSPDRALGGEPGCGFCDGCHTTVIGTHADVQIVRTDLLSIGVKETRDLVRRAQLSPAVGRWQVIVLEDADRLTEGAGNVILKAVEEPAPRTVWLLCAPSLEDVLPTIRSRCRHLSLRTPSVDAVADLLVRRDGIEPAVAAAVARATQGHIDRARRLATDESARTRRAAVLKLPLRVDDVGGCLKAAQELVDAAAEDAKQVAEEVDTKETEELRAALGAGAGAGSRMPRGTAGVMKELEDRQKRRRTRTQRDTLDLALTDLTGFYRDVLALQLGSSVAIANEEIRPDLDRVARASGPERTLRRIEAIIACRDALDRNVAPLLAVEAMTMSLRAG
>NZ_CP020039.1|WP_079405704.1|4547863_4551160_+|dTMP-kinase
MTRAEQPAVVTAPANPTYDEALAADSRERAVRALLRTPRLRRLWSAQLVSGIGDALALLVLVLLALQAAASEGAFGGGYRGAALAVAAVFGVRILATLLFGAVLLGPLAGLLGAGGKLDRRWTMIGADGVRLALFVVAPLWLDWIPAQALTALLATVFVSGAAERLWTLAKESAAPALLPAPPPEGATVRPLPDHLDALRRLTLRTAFAALPLAAAVLLAATLVGKALGLGIDWFAANQAALGSYVASGLFAASVSLLLPLVLPGGATPRPRSPLEGLRAPKAGDRPDKGRTGAVPLLVVSCAAVAGAVSSAVAVSVLHALDLGGGPAAFALFVLALVGGTAAGIRATQAGKVLPALSRRRLLALAIAVTGLALLLTGLVPDMATVLFLSLLAGLAAGVAANTGHTLLDQETEEFRRARVTEHLQAAVRVAVALGAVVAPVLAAAIGPHRLTGAEIVFAHGGAAFTLMLVGALLLPVAVVVLTKADDRRGVPLRRDLREALRGGEPVQAASATGFFIALEGGDGAGKSTQVEALASWIRGKGHEVVVTREPGATPVGKRLRSILLDISSAGLSNRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISRWATDGLVPNLTVLLDVSPEAARERFTEAPDRLESEPAEFHQRVRSGFLTLAASDPGRYLVVDAGQDPDSVTTVVRHRLDRMLPLSEAEVAAQAEARRLAEEEARRRAEEEAARKAEEERLRAEEEARKAREAEEARIKAEAEAARRAQEERLRAEEEARARAEAERLRAEAEEKARAAEAERLRRQAEEEARLRAEAEERRLEKQRRAEEALLKAEEARRLVEAEAAAKAAAVAAAAAAEAAAAAAAAPAPAPQTAPAPAPAPASAPKVGMTKKPEPDAEPHPDDAVTVETPMAAPPVKRVVQPDDVTQTVPVPKIGPASAEETAVLPPVRATDETAVLPPVRPDAPQASRTSQAPQAPQASQASQASQAPRAGGGGHRSATRPTAQRPEENPADRVPSGIFRDSGNDRTRELPVVDDEGRPRRARPDWAEETPLDDLPTLADELLGRHRDDEDGDEGERAPRRRR
>NZ_CP020039.1|WP_107089400.1|4563092_4564274_+|DUF2786-domain-containing-protein
MRDLAEIVDRAFAAALYAQDDAGLDTGASLLVADQGGWAAVGRELLARGEAYVRQGWERGWQPADVLRLVRRDLDERHLRITGDLIAAEARRYARLPARWGAGEVWWAGDEEYADRLAQRERADRFTLATAFLEVLRLLIRLPSIEPVGPLPGDPADALAEHAHIEPRMLGRIRALLAKAEATTFPEEAEALSAKAQELMARHTVDEALLAARGGGPKQVPGACRIGVEPPYEEAKAVLLDAVATANRCRAVWNSGFEFSTVVGFESDLEAVELLHTSLLVQGTAAMTRAEAAQRSGGRKRTKTFRQSFLLAYASRLGHRLAETAEHTATEAPDNLPALVARDVAVTSRADEMFPRTTTTRLRGATDHAGWEDGTAAADRAHMGGRRRPLPRG
>NZ_CP020039.1|WP_030383578.1|4564468_4564657_-|twin-arginine-translocase-TatA/TatE-family-subunit
MFRNAVQPWHVLLVLVVCLLVFGSKKLPDMARSLGRSMRILKSEAHALRTDPPGTPERHDGP
>NZ_CP020039.1|WP_079405712.1|4564773_4566819_+|hypothetical-protein
MSWLRALKGTARSGLTVERARLEPLAALRAAVGLALVIGAGLALLGPGAAASSAFGAFMAAIATFQQSWRPRPVLALASGLTLAVSTFVGYLVGASHTGLFLALLAAWTLVAGLLWAAGPTAGIIASGNVAVMLVTVTLPTSVAQAAGHAAMIAAGGVVQALLIVFFPVRRWGAQRDALADALAAEADYARRLRQDPVAPFDPAPLMRARAAATVTARQARRRPAELHGARGLAERIRPVLASLADPAVGGPGEGPGRDRVRELLAAAGEVLDAAAHAVRRGEPVRLPAPSPAVLKAPDTADLLAGAPLRAARRLAALLDDVLETARPGSGRTAAPGESMLRPTLPAMVPVVLTAVRAELRPGSPILRHAVRVTAVACAGYVIGQALPFGHGYWAPMASVMIMRPDFSQTYARAVARFGGTLVGVAVATGIVQLAQPGMYLSGFLAVVSAWLMYTLMRTGYAVAQLFVSAYVVFLLGMGGVRWDQTVPDRVALTLVGGVLAMIGYALYPAWETPRLRTRLADWIAAGGRYAAAVLDQYADPAGARRADVREALLAARDARIAWQEALDRAAGEPVRHRGLSHAAADGAGDALAAMGRCAMLLEAHVPDRGQAPVPGAADLAEALRTATGAGAKAVRERRVPQWDEVRAVLADWGAPGQGVLRGAAPQLLDSLDEVSEALRP
>NZ_CP020039.1|WP_030383576.1|4566938_4567184_+|DUF397-domain-containing-protein
MDHAYNGMAAAELATLFELTWQKSRHSNSQGSCVEFARLPGGDVAMRNSRFPDGPALVYTPAEIEALLLGVKDGEFDHLIG
>NZ_CP020039.1|WP_078626027.1|4567295_4567805_-|ATP-binding-protein
MGTNGSTMLEPLRQGLPPVDPTAVSGSASCALPARFDAVRGARTFTRSTLSQWGLDDRFDDVSLVVSELVTNALRHALPEDRRGPDAEPEPPVRLHLMRWSTRLVCAVRDPSEDRPGGAFSPERTSENCDLESGRGLFLVDAYSDSWGWHPLAGRLTGKVVWALFLLQD
>NZ_CP020039.1|WP_051778785.1|4568135_4569014_+|helix-turn-helix-domain-containing-protein
MGRAVLVTAEASGSVVRRILLGSQLRRLRESRGITREAAGYSIRASESKISRLELGRVSFKARDVEDLLTLYGVTDSTERESLLGLVREANATGWWHSYGDVLPGWFQTYIGLEGAASLIRIYEVQFVHGLLQTEAYAHAVVSRGMPGATGAEIDRRVALRLERQKVLVSENAPVFHAVLDEAALRRPYGDREVMRGQLEHLIEVSQRPNVQLQVMPFSFGGHAGESGAFTLLRFPESDLQDIVYLEQLTSALYLDKDEEVGQYERAMERLQADCPDPDRTRDLLRGLLQLS
>NZ_CP020039.1|WP_053175749.1|4569103_4570561_+|aldehyde-dehydrogenase-family-protein
MSIFSDLAHQYIDGEWLAGTGSWDIIDVNPYNGEKLAAITVATVEQVDQAYRGAERAQREWAATSPYIRRAVLERALRITEEREKEIVEAMIDELGGTRPKAEYEVHLAMEFIRESLQLAVRPEGRILPSPVEGKENRVQRLPVGVITVISPFNFPFLVTLKSVAPALALGNAVVIKPNQNAPVVGGGVIAKIFEDAGLPAGLLNVLVTDIAEIGDALLTHPVPKVISFAGSDRVGRHVGAVAARHFKRTVLELSGNSALVVLDDADLDYAVDAAVFSRFVYQGQVCMAANRILVDASVAEEFTQKFIARVRGLKTGDPHEADTHIGPLINSFQADALTALVDQAVESGAQALVRGSTRGNLVEPTVLAGIPEDSPLLGQEIFGPVALLVVFDGEDEAVRLTNATPYGLSGAVHTRDVERGVRFAQRIETGMIHVNDSTIGDEPLAAFGGEKASGLGRLNGEATIEAFTTQKWISVQHGRTTFPF
>NZ_CP020039.1|WP_078938260.1|4570622_4572710_+|penicillin-binding-protein-2
MSNIPETGRTPRVQNRLVVIQIVVFSLLLTLGGRLWYLQIRNGSEYTDEAKNNHVQQVVQPAVRGSILDSRGVPLADNATHLVVSASRTELLTMKDKGRSVLTRLAGVLGLDAQEVIDKVRLCDSKTKQPCWNGSPYQPIPVSDEATTEQALQIREHPEDFPGITAEATALRRYAAPDEANTSQVLGYLSPVTDEEIAKAKKSDSPYLRSDQVGRSGLERTYDKELRGKAGITRYEVDNLGRVIGQGETDPAQPGANIVTSIDSRVQAVAERELNNAMIEARKVYDKNTRRNYEADSGSVVVMETKTGRVVAMASNPTYDPNAWVGGISAKDYAGLTDKESNYPLLNRAIQAQAAPGSIFKVVTSTAAVNAGYPFNNRYPCPSSYSVGSQTFTNFESQGHGDITIGRALEVSCDTVYYALADQEWKKDGGINPKKNPNDWFFRTAHEFGLGKRTGIDLPNEVPGRVPDRKWKQDFFEANKVAWCRDGKKNGSFAEKIAYENCRQGNQLREGDAINYSIGQGDTLVTPIQMASVYSAIANGGTIHQPSIGKAIVSADGKSVQEIAPKEQGKLPMDAKTRNNIDQALAGVATDGSAAWRFGGWPQKQIPMHAKTGTAEVQGKQTTSWFASYTDDYAIVMTISQGGTGSGASGPAVRKIYEAMYGLDPTGKQDLSKALLPQPATALPAIRPDGEIEGN
>NZ_CP020039.1|WP_079405713.1|4572812_4573325_+|DinB-family-protein
MAQISTEVPGDERGTLLAFVEAQRTAIRESLLGLSEEQAASRPSVSELTLSGLLKHVAECELSWLRMAQQRPNELGRTEETWAEAFRLVDGESVPSVLAFWDDVAEQTAAFVAEVPSLDATFPLPPAPWFPENGKVSIRWMLLHLVEEFARHAGHADIVRESLDGTRAMG
>NZ_CP020039.1|WP_053175756.1|4573348_4573978_+|PadR-family-transcriptional-regulator
MSAIRLLVLGAVRQHGRAHGYQVRNDLEYWGAHEWSNTKPGSIYHALKQMAKQGVLHAHEVAPSAAGGPPRTEYEVTDAGREEYFRLLREALAAYDQKTDVLSAAIGFMVDLPRAEVLALLRERMAKLALWRSSVTEYYTPEGGPESLGHIGEIMHMWVHSADAEAEWTRGLVARIEGGAYSFAGEGGDPFVGVLADGQENPYAARQDA

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Crispr_ID: NZ_CP020039_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_14

4823944-4824070

Orphan

Consensus_repeat	Method
GCGGAGCCCTGGGAGACGGCGCCGCACCGGGCAAACGAACGGGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_14

>merge|NZ_CP020039|14|4823944-4824070|CRISPRCasFinder
GCGGAGCCCTGGGAGACGGCGCCGCACCGGGCAAACGAACGGGACCCGCCCCATCCCCGCAGCCCCGCCGGCGAGGCGCACCGCGGAGCCCTGGGAGACGGCGCCGCACCGGGCAAACGAACGGGAC

>NZ_CP020039|14|12|4823944-4824070|CRISPRCasFinder
GCGGAGCCCTGGGAGACGGCGCCGCACCGGGCAAACGAACGGGAC	CCGCCCCATCCCCGCAGCCCCGCCGGCGAGGCGCACC
GCGGAGCCCTGGGAGACGGCGCCGCACCGGGCAAACGAACGGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_030388330.1\|4821511_4822171_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP020039.1\|WP_030388334.1\|4815615_4816932_-\|M28-family-peptidase	unknown	unknown	gnl\|CDD\|349873
NZ_CP020039.1\|WP_030388324.1\|4827892_4828861_+\|NADH-quinone-oxidoreductase-subunit-H	unknown	unknown	gnl\|CDD\|376297
NZ_CP020039.1\|WP_053176139.1\|4817180_4818128_-\|EamA-family-transporter-RarD	unknown	unknown	gnl\|CDD\|225510
NZ_CP020039.1\|WP_053704263.1\|4829492_4830071_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376343
NZ_CP020039.1\|WP_079405813.1\|4830417_4832439_+\|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl\|CDD\|235836
NZ_CP020039.1\|WP_030388338.1\|4812357_4813368_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NZ_CP020039.1\|WP_079405808.1\|4813590_4814811_+\|DUF2092-domain-containing-protein	unknown	unknown	gnl\|CDD\|225390
NZ_CP020039.1\|WP_079405810.1\|4819417_4821361_-\|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	unknown	unknown	gnl\|CDD\|274738
NZ_CP020039.1\|WP_030388323.1\|4828860_4829478_+\|NADH-quinone-oxidoreductase-subunit-I	unknown	unknown	gnl\|CDD\|235637
NZ_CP020039.1\|WP_079405809.1\|4818345_4819425_-\|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	unknown	unknown	gnl\|CDD\|237006
NZ_CP020039.1\|WP_030388321.1\|4830070_4830421_+\|NADH-quinone-oxidoreductase-subunit-NuoK	unknown	unknown	gnl\|CDD\|180218
NZ_CP020039.1\|WP_053704228.1\|4832477_4834031_+\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|273903
NZ_CP020039.1\|WP_079405812.1\|4826495_4827896_+\|dehydrogenase	unknown	unknown	gnl\|CDD\|376317
NZ_CP020039.1\|WP_106977576.1\|4814923_4815133_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372613
NZ_CP020039.1\|WP_030388326.1\|4825890_4826499_+\|NADH-quinone-oxidoreductase-subunit-B	unknown	unknown	gnl\|CDD\|235797
NZ_CP020039.1\|WP_079405811.1\|4822427_4823720_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|379374
NZ_CP020039.1\|WP_053176191.1\|4815141_4815543_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_078972237.1\|4824166_4825345_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP020039.1\|WP_030388327.1\|4825492_4825900_+\|NADH-quinone-oxidoreductase-subunit-A	unknown	unknown	gnl\|CDD\|169084

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_030388330.1\|4821511_4822171_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.61173e-38
NZ_CP020039.1\|WP_030388334.1\|4815615_4816932_-\|M28-family-peptidase	gnl\|CDD\|349873	cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomyces griseus aminopeptidase and similar proteins. Peptidase family M28; Streptomyces griseus Aminopeptidase (SGAP, Leucine aminopeptidase (LAP), aminopeptidase S, Mername-AA022 peptidase) subfamily. SGAP is a di-zinc exopeptidase with high preference towards large hydrophobic amino-terminal residues, with Leu being the most efficiently cleaved. It can accommodate all except Pro and Glu residues in the P1' position. It is a monomeric (30 kDa), calcium-activated and calcium-stabilized enzyme; its activation by calcium correlates with substrate specificity and it has thermal stability only in the presence of calcium. Although SGAP contains a calcium binding site, it is not conserved in many members of this subfamily. SGAP is present in the extracellular fluid of S. griseus cultures.	5.8023e-137
NZ_CP020039.1\|WP_030388324.1\|4827892_4828861_+\|NADH-quinone-oxidoreductase-subunit-H	gnl\|CDD\|376297	pfam00146, NADHdh, NADH dehydrogenase.	3.38091e-110
NZ_CP020039.1\|WP_053704263.1\|4829492_4830071_+\|hypothetical-protein	gnl\|CDD\|376343	pfam00499, Oxidored_q3, NADH-ubiquinone/plastoquinone oxidoreductase chain 6.	4.50227e-31
NZ_CP020039.1\|WP_079405813.1\|4830417_4832439_+\|NADH-quinone-oxidoreductase-subunit-L	gnl\|CDD\|235836	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed.	6.14945e-155
NZ_CP020039.1\|WP_030388338.1\|4812357_4813368_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	2.00207e-89
NZ_CP020039.1\|WP_079405808.1\|4813590_4814811_+\|DUF2092-domain-containing-protein	gnl\|CDD\|225390	COG2834, LolA, Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane].	1.00029e-08
NZ_CP020039.1\|WP_079405810.1\|4819417_4821361_-\|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	gnl\|CDD\|274738	TIGR03710, OAFO_sf, 2-oxoacid:acceptor oxidoreductase, alpha subunit. This family of proteins contains a C-terminal thiamine diphosphate (TPP) binding domain typical of flavodoxin/ferredoxin oxidoreductases (pfam01855) as well as an N-terminal domain similar to the gamma subunit of the same group of oxidoreductases (pfam01558). The genes represented by this model are always found in association with a neighboring gene for a beta subunit (TIGR02177) which also occurs in a 4-subunit (alpha/beta/gamma/ferredoxin) version of the system. This alpha/gamma plus beta structure was used to define the set of sequences to include in this model. This pair of genes is not consistantly observed in proximity to any electron acceptor genes, but is found next to putative ferredoxins or ferredoxin-domain proteins in Azoarcus sp. EbN1, Bradyrhizobium japonicum USDA 110, Frankia sp. CcI3, Rhodoferax ferrireducens DSM 15236, Rhodopseudomonas palustris BisB5, Os, Sphingomonas wittichii RW1 and Streptomyces clavuligerus. Other potential acceptors are also sporadically observed in close proximity including ferritin-like proteins, reberythrin, peroxiredoxin and a variety of other flavin and iron-sulfur cluster-containing proteins. The phylogenetic distribution of this family encompasses archaea, a number of deeply-branching bacterial clades and only a small number of firmicutes and proteobacteria. The enzyme from Sulfolobus has been characterized with respect to its substrate specificity, which is described as wide, encompassing various 2-oxoacids such as 2-oxoglutarate, 2-oxobutyrate and pyruvate. The enzyme from Hydrogenobacter thermophilus has been shown to have a high specificity towards 2-oxoglutarate and is one of the key enzymes in the reverse TCA cycle in this organism. Furthermore, considering its binding of coenzyme A, it can be reasonably inferred that the product of the reaction is succinyl-CoA. The genes for this enzyme in Prevotella intermedia 17, Persephonella marina EX-H1 and Picrophilus torridus DSM 9790 are in close proximity to a variety of TCA cycle genes. Persephonella marina and P. torridus are believed to encode complete TCA cycles, and none of these contains the lipoate-based 2-oxoglutarate dehydrogenase (E1/E2/E3) system. That system is presumed to be replaced by this one. In fact, the lipoate system is absent in most organisms possessing a member of this family, providing additional circumstantial evidence that many of these enzymes are capable of acting as 2-oxoglutarate dehydrogenases and.	0
NZ_CP020039.1\|WP_030388323.1\|4828860_4829478_+\|NADH-quinone-oxidoreductase-subunit-I	gnl\|CDD\|235637	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI.	1.74413e-41
NZ_CP020039.1\|WP_079405809.1\|4818345_4819425_-\|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	gnl\|CDD\|237006	PRK11867, PRK11867, 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed.	1.28201e-172
NZ_CP020039.1\|WP_030388321.1\|4830070_4830421_+\|NADH-quinone-oxidoreductase-subunit-NuoK	gnl\|CDD\|180218	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK.	4.03313e-33
NZ_CP020039.1\|WP_053704228.1\|4832477_4834031_+\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|273903	TIGR01972, NADH-quinone_oxidoreductase_subunit_M, proton-translocating NADH-quinone oxidoreductase, chain M. This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport].	1.67889e-163
NZ_CP020039.1\|WP_079405812.1\|4826495_4827896_+\|dehydrogenase	gnl\|CDD\|376317	pfam00329, Complex1_30kDa, Respiratory-chain NADH dehydrogenase, 30 Kd subunit.	2.94217e-40
NZ_CP020039.1\|WP_106977576.1\|4814923_4815133_+\|hypothetical-protein	gnl\|CDD\|372613	pfam13467, RHH_4, Ribbon-helix-helix domain. This short bacterial protein contains a ribbon-helix-helix domain that is likely to be DNA-binding.	0.00209002
NZ_CP020039.1\|WP_030388326.1\|4825890_4826499_+\|NADH-quinone-oxidoreductase-subunit-B	gnl\|CDD\|235797	PRK06411, PRK06411, NADH-quinone oxidoreductase subunit NuoB.	2.22436e-88
NZ_CP020039.1\|WP_079405811.1\|4822427_4823720_-\|sensor-histidine-kinase	gnl\|CDD\|379374	pfam13796, Sensor, Putative sensor. This family is often found at the N-terminus of proteins containing pfam07730 and pfam02518. The N-termini of proteins containing these two domains often function in stimulus sensing.	6.13072e-42
NZ_CP020039.1\|WP_053176139.1\|4817180_4818128_-\|EamA-family-transporter-RarD	gnl\|CDD\|225510	COG2962, RarD, Predicted permeases [General function prediction only].	1.97087e-98
NZ_CP020039.1\|WP_078972237.1\|4824166_4825345_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.90727e-30
NZ_CP020039.1\|WP_030388327.1\|4825492_4825900_+\|NADH-quinone-oxidoreductase-subunit-A	gnl\|CDD\|169084	PRK07756, PRK07756, NADH-quinone oxidoreductase subunit A.	5.86296e-35

>NZ_CP020039.1|WP_079405811.1|4822427_4823720_-|sensor-histidine-kinase
MGKGKGGVGAVLWAPVAGRTWREFGYLLIGLPLSTLYFSLAITGVSLGAGLLVTFLGVPVLAGVLAMCRGFGHLERARVRVLLGTDIAAPAPIRAGKAGPLAAMGALLKSGSAWRHVLYSVIHFPWAVFSFCLSLVLWAFGWSYLLYPLWFWVFPAYTDQPGLQLFQNDDYTFYLDSPAEIALTCLIGLAVTLATPWVIRALTTVDRVMVGGLLGASSLADRVSELESDRGVVVDTAAADLRRIERDLHDGAQARLVALAMDLGMAKEKLTEDPRAAARMVDEAHGEVKIALQELRDLARGIHPAVLTDRGLDAALSSVASRCAVPVRVAVDLPARPAAAIEGIAYFTVSELLQNVSKHARARSASVDVWKSGERLLIQVADDGAGGAGSAEGTGLAGLTERLDAVDGVLVVDSPAGGGTTVTAELPWRA
>NZ_CP020039.1|WP_030388330.1|4821511_4822171_-|response-regulator-transcription-factor
MRVVIAEDSVLLREGLTRLLTDRGHDVVAGVGDAEALLKTVAELAAEGALPDVVVADVRMPPTHTDEGVRAAVRLRRDYPGIGVLVLSQYVEEQYATELLAGSSTGVGYLLKDRVAEVREFLDAVVRVARGGTALDPEVVAQLLGRSRKQDVLAGLTPREREVLGLMAEGRTNSAVAKQLVVSDGAVEKHVSNIFMKLGLSPSDGDHRRVLAVLTYLKS
>NZ_CP020039.1|WP_079405810.1|4819417_4821361_-|2-oxoacid:acceptor-oxidoreductase-subunit-alpha
MTSQVSSPAEQADGAGGAVVGGQRTPESPGGKEVRRLDRVIIRFAGDSGDGMQLTGDRFTSETASFGNDLSTLPNFPAEIRAPAGTLPGVSSFQLHFADHDILTPGDAPNVLVAMNPAALKANIADVPRGAEIIINTDEFTKRPMAKVGYATSPLEDGSLDAYNLHPVPLTTLTVEALKDFGLSRKEAERSKNMFALGLLSWMYHRPTEGTESFLRQKFAKKPEIAEANIVAFRAGWNFGETTEDFAVSYEVAPATRAFPTGTYRNISGNLALSYGLVAASQQADLPLYLGSYPITPASDILHELSKHKNFGVRTFQAEDEIAGIGAALGAAFGGALGVTTTSGPGVALKSEAIGLAVSLELPLLIVDIQRGGPSTGLPTKTEQADLLQAMFGRNGEAPVPIVAPRTPADCFDAALDAARIALTYRTPVFLLSDGYLANGSEPWRIPEVADLPDLKVKFATGTNHTLGDGTEVFWPYKRDPETLARPWAIPGTPGLEHRIGGIEKQDGSGNISYDPANHDLMVRTRQAKVDGIRVPDLEVDDPDGATTLVLGWGSTYGPITAAVRRLRGAGLPIAQAHLRHLNPFPRNLGEVLERYEKVVVPEMNLGQLATLIRAKYLVDAQSYNQVNGMPFKAEQLATVLKEAIDD
>NZ_CP020039.1|WP_079405809.1|4818345_4819425_-|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta
MTEVTEATDGARTLLSLVPKAESKQSMKDFKSDQEVRWCPGCGDYAVLAAVQGFMPELGLAKENIVFVSGIGCSSRFPYYMNTYGMHSIHGRAPAIATGLATSRRDLSVWVVTGDGDALSIGGNHLIHALRRNVNLKILLFNNRIYGLTKGQYSPTSEVGKITKSTPMGSLDAPFNPVSLAIGAEASFVARTVDSDRKHLTEVLRRAADHQGTALVEIYQNCNIFNDGAFEVLKDKDQALEAVIRLEDGQPIRFGADGTKGVVRNPATGDLEVVEVTAANEAQILVHDARNASATTAFALSRLADPDTLHHTPIGVFRSVERPVYDTLMADQLDAAIDRSGKGDLGALLTGNDTWTVVG
>NZ_CP020039.1|WP_053176139.1|4817180_4818128_-|EamA-family-transporter-RarD
MKAENEQRTGLLYGFGAYGMWGLVPLFWPLLKPSGAVEILAHRMVWSLAVVGLALLALRRWGWIRELLRRPRKLGMTALAALVITVNWGLYIWAVNNGHVVEASLGYFINPLVSIAIGVLVLGERLRRAQWVAVGLSFAAVLVLAIGYGRPPWISLVLAFSFATYGLIKKKLNMGGLESLAAETAVLFLPALGYVLWLGAQGQSTFASHGVAHAALLAATGLVTAIPLVFFGMAAIRVPLSTLGLLQYMAPVFQFGLGVLYFHEAMPPERWAGFSLVWAALALLTWDALRAARRSRVRLEAAAPAVVAAPAREPA
>NZ_CP020039.1|WP_030388334.1|4815615_4816932_-|M28-family-peptidase
MSLSVSRRLAAVTAFAVAGLFASTAPAALAAPTAVTAAPTPPDIPLANVKAHLSQLSTIAANNGGNRAHGRTGYKASIDYVKAKLDAAGFTTTLQTFTSSGATGYNLIADWPGGDPNSVLMAGSHLDSVTSGAGMNDNGSGSAAVLETALAVSRAGLQPTKHLRFGWWGAEELGLIGSKYYVNNLPAAEKAKISGYLNFDMIGSPNPGYFVYDDDPTIEQTFKNYYAGLGIPTEIETEGDGRSDHAPFKSAGIPVGGLFSGADYTKTAAQAQKWGGTSGQAFDRCYHSSCDNLSNINDTALDRNSDAVAYAIWTLGAATPVPPGQSFENTTDVTIPDSPAAAVTSSITASGVTGNAPATTKVDVNIVHTYRGDLVVDLLAPDGTVYNLHNRAGGSADNLVQTYTVNASSEVANGVWKLRVKDAAAQDTGYINSWKITF
>NZ_CP020039.1|WP_053176191.1|4815141_4815543_+|hypothetical-protein
MEWAWTALAHHLPSDPAVWDPSGVAAAVARHQNDLVLVPEQPAPDTAWRAAAFLHTLAVCPALESPMNEFYAAAATRSYLRVAGAKQLPSPEELGDLVEAAKCGRADIAAVASELRARIQEPLQVSGRRTEDT
>NZ_CP020039.1|WP_106977576.1|4814923_4815133_+|hypothetical-protein
MDMSRHVTIRLDEEFHERLKARAAALGTTVTALITEVTERELDEDRKNFLSGIEEFADHWSYFQERFGN
>NZ_CP020039.1|WP_079405808.1|4813590_4814811_+|DUF2092-domain-containing-protein
MAPNTKTSRKAARYAVPVAVAGVAAATVAMVPAFANAGGPDLPKVTAQQLIEKVAASDVQQLSGTARITTDLGLPKIASGLLGGGGIAGGSANPEDKVAQLANGSHTLRVAADGPERQRLTFLDGKDEYSLIHNGDDVWGYDSKSNEVFHEKNTEAGKGKDGKEGKDHKTGDRLAASPQKLAEELLAAAGPTTDVSVGGTAQVAGRDAYQLVLKPKQSGSTVGSVQIAVDAKNGVPLRVQVLSAQGGKPIVDAGFTKVDFAKPAADTFAFTAPKGAKVTEGVDGAAKGKGGADEHWKALESFPGLGDLAGGANGKGDVKVLGEGWSTIARIDSGAQRSLKDLENDKSAPKEAKQFLDSLGDKVNGKFGEGRVLSTRLVNALITDDGKVYVGAVTKDALVQAANANK
>NZ_CP020039.1|WP_030388338.1|4812357_4813368_+|polyprenyl-synthetase-family-protein
MTVVGPFGLSVRDQALETDVQAGLAAVEAGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLASRFGDPYAPGIVPSAVVVELTHLATLYHDDVMDEADVRRGVESANARWGNSVAVLTGDFLFARASHILADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVAHYLDVIAGKTGSLIAVSGRFGALMSGADESVVDILTQYGERLGTAFQLADDVLDIASDAHESGKTPGTDLREGIPTLPVLRLREMADRDGDPADLELVSLLDGDLTDDARHAEVLTRLRAHPALERARRDTIQYAEDARAALAPLPECFAKSALEELCDAVVHRAG
>NZ_CP020039.1|WP_078972237.1|4824166_4825345_-|sensor-histidine-kinase
MTLSHAIPDNDRPPPVRAVFSAVTWKEIAYLVSNLPLAVVGFVYAVVMVSTAGGLSVTAIGIPLLACGLYLSRQWGRLDRARARGLLGVRVDEPTPIPGPKRSGGFFPWLWTSIKDPVGWRTVLYQLIRLPWGVLTFTVALTGLFVLWPVLPYLVRLMANVDRAMVRGLLSPSDDLERRIAELESDRGVVVDTAAADLRRIERDLHDGAQARLVALAMGLGLAKEKLLEDPEGAAAMVDEAHGEVKLALQELRDLARGIHPAVLTDRGLDAALSSVAARCVVPVKVVVDLPGARPAEAIEGIAYFVVSELLQNVSKHAGPGARGATVEVWRAGARLMLRVSDDGRGGASAAGGSGLAGLAERLGAVDGVLVVDSPAGAGTVVTAELPWRDRG
>NZ_CP020039.1|WP_030388327.1|4825492_4825900_+|NADH-quinone-oxidoreductase-subunit-A
MPEPTVSTVTVLAADYFRSYSVVGLLAVLGVLFVAVAFGAGRLLRPVVPTPEKLLTYECGVDPVGEGWAHTQVRYYVYAFLYVIFAVDSIFLFPWATVFAAAGYGATTLVEMFIFLGFLAVGLLYAYKKGVLEWT
>NZ_CP020039.1|WP_030388326.1|4825890_4826499_+|NADH-quinone-oxidoreductase-subunit-B
MDVTPAVTPTEGVLLPEPKRLGVLSRLAPEPMKVVLNWGRRYSLWVFNFGLACCAIEFIAASMARHDFIRLGVIPFAPGPRQADLMIVSGTVTDKMAPAVKRLYEQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQIIPVDVYVPGCPPRPEALLQGILKLQEKIARESLAERYANGPSVSQLTSGLVTPPPAPTSGAGA
>NZ_CP020039.1|WP_079405812.1|4826495_4827896_+|dehydrogenase
MNLYDSLPDAAATVFGAEAVAEFSYDVLTVDVPVGSWISALEIARDKLGCTYFDWLSAVDEPGTGFRICAHVASLENHRVRRLLLRTTVPHSAASLPSAVAVYAGAEWHERETFEMFGVTFTDHPNLVPLLLPENFEGHPLRKDFVLAARVAKAWPGAKEPGEAHDPDAPKRRQMLPPGVPDPNDWGPMKGQLPPAPARPARTPRAAGAAGAAARTPREGAPVRRTRSVAEGSTTQPPAEASPATASPGAEPGAPAAEATPRPPRRTRSVSEGSASQAAAAAGPDAASPSAEAAPRPPRRTRSVSEGSASQAAAAAAPDAEPAATPDAPAPEAAARPPRRSRSVADGSASQTPAPGAPDAGEAAAPPRRPGPRSSDAPWHDPKPAFEEPAPRPAPEAAPAPPAAAPKAEPHEPPAAEPAAEPEPESEPGPAPEPGPAPEPGPAPERGPGRPATPKTDPTPDNGGDA
>NZ_CP020039.1|WP_030388324.1|4827892_4828861_+|NADH-quinone-oxidoreductase-subunit-H
MNDVLDVALRLIVVFAVFLVLPLVVGQTEHKVMAHMQGRLGPMYAGGFHGWAQLVADGVKFAQKEDIVPAGADRRIFQLAPAVALLPYLLVLLAIPIGPGEGAVGQVIDAGLFFVLAVMGVGVLGSLMAGWASANKFSLLGGLRTAAQLLAYELPMLLAAASVAMAAGTVSLPGIVEAFEWWWLPWQIVGALVFFTAGLAELQRPPFDMPVADSEIIFGAYTEYTGLRFALFLLAEYAGIVVLCFLTTVLFLGGWHGPFGGDDLGWVWTLLKTAILAFVVIWLRVSYPRLREDQLQKLAWTTLIPLALAQIALTGIVKVAIQ
>NZ_CP020039.1|WP_030388323.1|4828860_4829478_+|NADH-quinone-oxidoreductase-subunit-I
MPIPGSGLAKGLAVTLRTMTKRSHTAQYPEVQPELPPRSRGVIGLFEENCTVCMLCARECPDWCIYIDSHKETVPASTPGGRERSRNVLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAETDIHELTHERDKLREWMWTVPAPPALDPAAEEPKEIAAARKAVEKAEAAAAAAAAAEAAARAAESEPPTEPPTEPTPEGDA
>NZ_CP020039.1|WP_053704263.1|4829492_4830071_+|hypothetical-protein
MAAAATTGPGFLSPTGVEIAFVLVGLATLGAALVTVTTKQLVHAALWLVVALGGIAVEYLLLTAEFIAWVQVLIYLGSVVVLLLFGLMLTKAPIGRSPDADSGNRWIALGVAVVAAVSLVWVVVDAFRTTWIDLDGPVQGSTKVSGEILFQHWVLPFEALSVLLLAALIGAIVLSRRTDPAEDADASDKGQR
>NZ_CP020039.1|WP_030388321.1|4830070_4830421_+|NADH-quinone-oxidoreductase-subunit-NuoK
MHLAYPAVLAALLFCTGLYGVLARRNAILVLMSVELMLNAVNLNLVAFDVWLRDALHAGQALTLFTIAIAAAEIGIGLAIVLMVYRNRGTSDVDRLRDTAEGHEPAAANNQSEVTA
>NZ_CP020039.1|WP_079405813.1|4830417_4832439_+|NADH-quinone-oxidoreductase-subunit-L
MSTTTLAVLVPLLPFLGAVAGLLLGRTAPGFVRPLAILPTLASAVLAVVVAVRQGGGEPIDTATELTPTGSVPIDLSLYLDGFAVLVAVLVGVVATCVQLYSTAYLREDPRYPSYAALVSLFTSAMLLVVYSGDLMVLLVGWEIMGICSYFLVGHYWETEAARSASLKAFLVTKLGDVPFLIGLFALGTDAGSFRIPKILNTVAAGGLDHPTLIALLLLAGVAGKSAQFPLHTWLPDAMAGPTPVSALIHAATMVAAGVYFIARLLPVFAASRAALVVMAVMAAVTMIGSGLAAIAQDDIKRVLAYSTVGQLGYMVGALAVGDRGAAVFHLLSHGAFKALLFLGAGVIIHAAGTNSLGAMSRMGGLSKRIPDAFWTMTIALLALAAVPPFAGFFSKEAVLVAAENTAAGHSEFAPSAAGWLVLVAGLLTALLTAAYATRLWLMAFRGRGAAAPDHGKEPLAMTGVLWLLAIPSVGFGLAAGPIAGWFDGGELTPTLVTSVLGTGAAAIGAMLTYALWQRASAKAALATAAGTRAAAAAGEPAAAVAAESAAEAPEVAEVTHDHPAVPVGPAADPGKAFLGPLHRHAADGFHLDAVYDRLFVRPVRAAASLVRFLDREVVDTYVRGAGTGTQLLGSLVRRAQTGNVQSYLSALLAGAVVLAIATAVLANVNAGS
>NZ_CP020039.1|WP_053704228.1|4832477_4834031_+|NADH-quinone-oxidoreductase-subunit-M
MQFLLAFIVVAPLLGSAAALLPAPPGLKGKSPEQAVLRHGVTVTGVILAAAIALTLGFDHDAPSRFQATTDISWIQALNVRIHLGIDGISLPLLLMTALLFFLCALYSYFKLPAGPSPKAFVALLLVLESGTLATFAVLDLLLFFLAFEMVLIPMYFLIARWGGAQRQAAAWKFILYTLLGSVVMLLGLLLIGVTSGTFDMVALASDNGRELSHTTQLLAVLAIGLGLAVKTPMWPLHSWLPDAHTAAPTVGSVLLAGVLLKMGTYGFVRILLPITPDGMATFAPYLGAFAAVGIVYGSLACLALARKGNKGDLKRLIAYSSVGHMGFVLLGIASMTPTGVNGALFANIAHGLITGLLFFLVGALKDRYGTADLDTLAGATGAALYGRAPRMGAFLAFAAVASLGLPGLAGFWGEMLALFGAFEPAEGLSRPAFLTYMAIGAFGTLLTAAYLLIVVRRVCMGDPKAGPELAVPDIQRYEFAAWTPLVALTVLAGLWPAVLLGLTDPAVQKLLAGGNS

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Crispr_ID: NZ_CP020039_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_15

4937974-4938093

Orphan

Consensus_repeat	Method
GCGCGGGGTCCGGGGCCGAGCCCCGTGCAACGGCGGGGTGACGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_15

>merge|NZ_CP020039|15|4937974-4938093|CRISPRCasFinder
GCGCGGGGTCCGGGGCCGAGCCCCGTGCAACGGCGGGGTGACGGGGGACCGCCGAGCCGCCCGCAGGGCAACCCGCGCGGGGTCCGGGGCGGAGCCCCGTGCAACGGCGGGGTGACGGGG

>NZ_CP020039|15|13|4937974-4938093|CRISPRCasFinder
GCGCGGGGTCCGGGGCCGAGCCCCGTGCAACGGCGGGGTGACGGGG	GACCGCCGAGCCGCCCGCAGGGCAACCC
GCGCGGGGTCCGGGGCGGAGCCCCGTGCAACGGCGGGGTGACGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_053176995.1\|4941284_4942058_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP020039.1\|WP_030390923.1\|4936822_4937503_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP020039.1\|WP_030389109.1\|4946444_4947944_+\|IMP-dehydrogenase	unknown	unknown	gnl\|CDD\|376340
NZ_CP020039.1\|WP_030389108.1\|4945586_4946216_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236607
NZ_CP020039.1\|WP_030389103.1\|4938777_4940409_+\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP020039.1\|WP_079408002.1\|4929906_4930776_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP020039.1\|WP_079405846.1\|4934233_4935427_-\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NZ_CP020039.1\|WP_030011164.1\|4943908_4944235_-\|WhiB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376791
NZ_CP020039.1\|WP_107470209.1\|4931367_4932606_+\|tetratricopeptide-repeat-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_030388836.1\|4927032_4927287_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_030389107.1\|4942866_4943766_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176115
NZ_CP020039.1\|WP_079408003.1\|4942089_4942776_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_CP020039.1\|WP_079405842.1\|4927618_4928872_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|380115
NZ_CP020039.1\|WP_030389104.1\|4940477_4941188_-\|ester-cyclase	unknown	unknown	gnl\|CDD\|377824
NZ_CP020039.1\|WP_030389102.1\|4938356_4938665_+\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP020039.1\|WP_053169722.1\|4930841_4931126_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_159395636.1\|4935483_4936830_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP020039.1\|WP_079405843.1\|4928944_4929892_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP020039.1\|WP_079405845.1\|4932809_4934246_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843
NZ_CP020039.1\|WP_003948568.1\|4944614_4945226_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_053176995.1\|4941284_4942058_-\|SDR-family-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	5.23919e-79
NZ_CP020039.1\|WP_030390923.1\|4936822_4937503_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.42272e-78
NZ_CP020039.1\|WP_030389109.1\|4946444_4947944_+\|IMP-dehydrogenase	gnl\|CDD\|376340	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain. This family is involved in biosynthesis of guanosine nucleotide. Members of this family contain a TIM barrel structure. In the inosine monophosphate dehydrogenases 2 CBS domains pfam00571 are inserted in the TIM barrel. This family is a member of the common phosphate binding site TIM barrel family.	0
NZ_CP020039.1\|WP_030389103.1\|4938777_4940409_+\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP020039.1\|WP_079408002.1\|4929906_4930776_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	8.53969e-32
NZ_CP020039.1\|WP_079405846.1\|4934233_4935427_-\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	1.31095e-59
NZ_CP020039.1\|WP_030011164.1\|4943908_4944235_-\|WhiB-family-transcriptional-regulator	gnl\|CDD\|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	6.71868e-28
NZ_CP020039.1\|WP_030389108.1\|4945586_4946216_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236607	PRK09648, PRK09648, RNA polymerase sigma factor ShbA.	4.71734e-88
NZ_CP020039.1\|WP_030389107.1\|4942866_4943766_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176115	cd08423, PBP2_LTTR_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.0536e-57
NZ_CP020039.1\|WP_079408003.1\|4942089_4942776_-\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	6.09757e-59
NZ_CP020039.1\|WP_079405842.1\|4927618_4928872_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|380115	pfam18096, Thump_like, THUMP domain-like. This is a domain of unknown function found in bacteria.	8.93509e-19
NZ_CP020039.1\|WP_030389104.1\|4940477_4941188_-\|ester-cyclase	gnl\|CDD\|377824	pfam07366, SnoaL, SnoaL-like polyketide cyclase. This family includes SnoaL a polyketide cyclase involved in nogalamycin biosynthesis. This family was formerly known as DUF1486. The proteins in this family adopt a distorted alpha-beta barrel fold. Structural data together with site-directed mutagenesis experiments have shown that SnoaL has a different mechanism to that of the classical aldolase for catalyzing intramolecular aldol condensation.	5.14146e-28
NZ_CP020039.1\|WP_030389102.1\|4938356_4938665_+\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	3.63622e-48
NZ_CP020039.1\|WP_159395636.1\|4935483_4936830_-\|HAMP-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.47248e-56
NZ_CP020039.1\|WP_079405843.1\|4928944_4929892_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	1.17503e-36
NZ_CP020039.1\|WP_079405845.1\|4932809_4934246_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	5.00463e-80
NZ_CP020039.1\|WP_003948568.1\|4944614_4945226_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.73082e-50

>NZ_CP020039.1|WP_030390923.1|4936822_4937503_-|response-regulator-transcription-factor
MRILVVEDEEGLAESLRRGLSADGHRVDTAHDGHLGMDLALAGGPYDVVLLDLMLPGPSGHAICTRMRAHGDTTPVLMLTARDGEYDEAEGLDSGADDYLTKPFSFVVLAARIRALARRAGAPDRGTLQAGDLVLDPQGRRCRRGDRDIELTARELGVLACLMEQPGRAVAKQDILDEVWDSPHGIDPNIVEVYVSSLRKKIDAPFGRRSIRTVHGTGYRLAPDGG
>NZ_CP020039.1|WP_159395636.1|4935483_4936830_-|HAMP-domain-containing-protein
MVSSIRARTAAAAALAMAAVLAAGGLWLHALLRANLLDNTTGRAELAARKVAAQLDSRTLPPGGRLPAPESGVDLVLVRDEAGRTVASTGAGDPKHAPDLAGAPRPGPGEDSRSAVLPPARPGGERRAVVVVNAPGAHTVYAMTVLGDVDDATRAVAIGLLAGAPPLIGFAAALAWWVTGRALRPVNAIRRELAAVTASELDRRVPDPGGADEIARLARTVNDTLDRLERSDARQRQFTADASHELRNPLAAVRSRLEVALAMDRPDRESVGAALADTERLQRIAADLLLLARLDGGPAPRSEPVDLALLAAEDAARRGGPRGDAGVSLRLDARAPVPASGDPARLERALANLVDNALRYARAEVVVRAAEHDGWRLLEVTDDGPGIPEADRDRVFERFVRLDADRGRASGGTGLGLAIAREIARAHGGDVRALPAPGGGARLVLRIR
>NZ_CP020039.1|WP_079405846.1|4934233_4935427_-|LCP-family-protein
MSAHRRKPTTRSRRRPSRRRRAVRTLLVTGCALVALTGGGAWYLYRDLAAGIGSSKALEGAEKSKSGDSNILLMGLDSRRDRNGEKLPEEVLDKLHAGSSDIGGYNANTLILLHVPGDGSRAKAFSVPRDDFVDIPGHGKDKIKKAYGLAKERRQEQLAAQGVTDVRQLERDGREAGRAAQIETVRNFLGVPIDHFAELNLAGFYHLADALGGVPVCLNRAVKDSYSGADFPAGPQTLDGRQSLAFVRQRHGLERGDLDRTKRQQAFLAGATKKLNSAGTFTDPAKLIKLVDAAKQDVVTDEGWDLLAFVKQARNLSGGKVQFTTLPIEGFGRNHGEDINVVDDMKIKRLITEQIGPKASPGPGAPSSPAASSSPPSPPSPSSPPASRDGGGIPCVD
>NZ_CP020039.1|WP_079405845.1|4932809_4934246_-|FtsW/RodA/SpoVE-family-cell-cycle-protein
MRGLKPLTTAVARRRTEALLLLFVIAIAVLGHAAAGLAMNDELPPNLAGFTISMTLLSLVGHLGVRRFAAYADPLILPLAMLLTGLGLVLLHRLDQGYIERYNSDANAPGQLMWTVVGVAACLLVLALLRDHRLLQRFIYITMAVALVLLIAPAFFGADTYGAKRWIKLFGFSLQPGEFVKIMIAIFFAGYLVVHRDSLALTGRRFLGMRLPPMRQLGPIVTVWIVSMLVLVFERDLGTSLIFFGVFVVMLYVATERTSWIVCGLLMAAAGAFVVGSTEPHVKARVAAWLNPLSYYWENRPAGVTSDQSAQALFSFGTGGISGTGLGMGHPELIAFAGRSDFILTTVGEELGLAGVMAVLILYALLVQRGLRMALGARDPFGKLLAVGLAAALALQVFVVAGGVTGLIPLTGKALPFLAKGGSSLLANWIMIALLLRISDSAERQREADTHGPAETTITPLVTAEARPGGGEREPLGR
>NZ_CP020039.1|WP_107470209.1|4931367_4932606_+|tetratricopeptide-repeat-protein
MAEDGDWFCARAWARLLAGRGELHEALEVLAPYVATGWWTAAAEAARLLDAGGRGEEAVTLVRPFASQGEPSALHDLALLLARHGQGEEAYELLLPHVTDWMLAEALVEVGVGLGRGDEIAELLEACRAPGMPCAHCGSPECGRPYMEPFNAVNLLALVREKQGRTDEAIAVLHSPGATVVNNRDPLAELLVRHDRIDELRAYVAGTGTHEALRRLAELLEEGGDVAGAVDVYRKYGKEDRLNTAVLLAELLARHGRGAEAIEVMRAPDSAEDWVVDLLCKLFAAEGRAEEGLAHLDALKARRGEEEWELFRLRGPLMAACGRLDEAVAEARAHPEGGSWYATESLACLLIDSGRPEEAVALLDADRLDHRRPLGPLLVELGRVEEAVTLLRTPRPHTPPPQPTAYSDTPPF
>NZ_CP020039.1|WP_053169722.1|4930841_4931126_-|hypothetical-protein
MYAAVRRYEGVTDPAEAGRLVDEGFVPIMRQVPGFVAYYWVDAGGGVMVSTSVFRDRAGIDESIARAAQFVRDNLAQFLPNPPQVTAGEVVASA
>NZ_CP020039.1|WP_079408002.1|4929906_4930776_+|polysaccharide-deacetylase-family-protein
MVVATLAAGALALSLTGCGDNVDTTERLGRRTAEATPDAGGATPSAAPSGATPAPGSASDEAYKKWGLTAPLQYAPKPAQKPQIPKPTAGKVPVIDRIPVAPDDKVVFLTFDDGAEKDPEFLKMAADLKLPISMFLTDNVASSDYGHFEKLRDNGSASTINNHTLSHPNLRTLSFEGQKKEICGQQDRLEKRFGQRPPLFRPPFGNYNDDTLRAASECGVSSLVLWRVSMQINNFQYAEGSALKPGDIVLAHFRGPGELKGTTETQMTTRMLQRIQEQGYRIGRLEDYL
>NZ_CP020039.1|WP_079405843.1|4928944_4929892_+|polysaccharide-deacetylase-family-protein
MQLVRQKGNNSQQGHRYAAGPRGRFGVAVAALLVAALGTACGSGDSGPDKAAKEKAAKAAGAGAAGALSAAEKAKAAQQARVVAAKKWGLRKTPLTAPPAPKEKPEITTRDGFEVEDQEEYPHVFTTVPTEDKVVFLTIDDGSEKDPEFLKMMQELKIPYTAFLSDYVVRDNYPYFKKMQAAGVTLNNHTLNHRYMPGLSYEQQREEICGQQDTIQKQFGKRPTLFRPPYGNYNQDTLRAAKSCGIKAVPLWNAEAFTNRMDYREWDRDLHPGDIILTHFRGKEDWKGTMPDMIRHVMKTVTDKGYAVARLEDYL
>NZ_CP020039.1|WP_079405842.1|4927618_4928872_-|methyltransferase-domain-containing-protein
MAHTVRVPPVADNGAVTPEDFAALLAPEGRALLDSLRDYDPAQELAVATRLRREHPAGLVSAALGQARLRQRAVAKFGAEDAFRMYFTPGGGEMATRASVASYRAERLAALGVRSLADLCCGIGGDALALARLGIRVLAVDHDPLTVAVARANAEALGLADLIEVREADVTEVDTSGYDAVFIDPARRGGRGRIFDPESYSPPLSWAVETARAAKYAAIKIAPGIPHEAVPAEAEAEWISDQGDVKEAVLWFGTAPGTVRATLLPGPRGLQTADPLPDPAAGPVGRWLYEPDGAVIRAHLVAEVAEQLDGRLIDPTIAYVTADELRATPYATAYEITDVLPFGLKKLKALLRERGVGIVTVKKRGSAIEPEELRRKVKPQGPNSATVFLTRVAGAPSMLIGAPATPPAGPPAATLDG
>NZ_CP020039.1|WP_030388836.1|4927032_4927287_+|hypothetical-protein
MWEARAADGRGNELLEWARAQVLAREPVRREVFRAPQDRVLVITWWEAAEGVAADLPELPEPAADLITRAVHRWRFESVQVDET
>NZ_CP020039.1|WP_030389102.1|4938356_4938665_+|co-chaperone-GroES
MTTTSSKVAIKPLEDRIVVQPLDAEQTTASGLVIPDTAKEKPQEGVVLAVGPGRFEDGQRLPLDVTVGDIVLYSKYGGTEVKYSGEEYLVLSARDVLAIVEK
>NZ_CP020039.1|WP_030389103.1|4938777_4940409_+|chaperonin-GroEL
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVELDDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGIDAAVKAVSEELLATARPIEDKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNTFGLELEFTEGMAFDKGYLSPYMVSDQERMEAVLDDPYILINQGKISSIQDLLPLLEKVIQAGASKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMATLTGATVIAEEVGLKLDQAGLDVLGSARRVTISKDDTTIVDGGGSHEEVLGRVNQIKAEIESTDSDWDREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALVHAVKVLEGNLGLSGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNAATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKPAEDEGDAGHGHGGHGHSH
>NZ_CP020039.1|WP_030389104.1|4940477_4941188_-|ester-cyclase
MTFVQVIDYETRRFDEMNALIDRWAEQSSGRRTATHTMIGQDREARNHYVDMVEFPSYEEAMKNSHLPETDRMFQEMVALCEGMPKFMNLDVVRDEHLNKQLARRVFEEAAMGGNMGVLDECFATNYIDHDVSKAESTVIGRDAMRSDMETWRAAFDMTFEPQAMLAEGDMVTTVWNWRGTHKGTFMGVAPTGKTYEMSGSTTFRCLEGEIVEGWWHYNTAALQRQMGGSGSPYGT
>NZ_CP020039.1|WP_053176995.1|4941284_4942058_-|SDR-family-oxidoreductase
MTTALITGSTAGIGAAFARRLAAQGHNLVLVARDTKRLGEQATELHDRHGIEAEVLAADLSTEEGIAAVERRLDDRTHPVDLLVNNAGFGNKGRYLEVSMADELTMLKVHIEAVLRLTSAATASMRSRGRGGVINVASVAAFVPRGTYGASKAWVVQFTQGAARDLSGSGVRLMALCPGFVRTEFHERAGMGTDNIPSWMWLDADKLVASALADLARGKTVSIPDPRYKALMGVVKLTPRGLLGGVSSRTGRKYGPQ
>NZ_CP020039.1|WP_079408003.1|4942089_4942776_-|MOSC-domain-containing-protein
MHLISVNLGRATAVDYSDAEGGVTGIGKRPVPGPVRVVAPGPKATGLGSGLEGDAVCDRRHHGGDHQAVYAYAREDLDLWERSLDRELPAGIFGENFTTSGIDLNTARLGDRWRVGADLVLEVASARIPCRTFQGALGEAGWVKRFTKEARPGAYLRVIEEGSVSPGDAIEIIHRPDHEVTVELWFRAFTTERALLPLTLAAGGAMEPEAHERVRLYVEKYGAGAGAK
>NZ_CP020039.1|WP_030389107.1|4942866_4943766_+|LysR-family-transcriptional-regulator
MIEARHLRVLRAVAGTGSFSAAARELGCTQPAVSQQMKALEQSAGTPLLIRTGREMRLTQAGEALVRHAAGILAGLTAAEEEVAAIAGLRAGRVRLVSFPSGSSTLVPTALAAMRAEHPGTRISLVEAEPPRSVEMLREGDCDLALAFRYGGAAHSAAEWDDLVVRPLLTDRLVGLVPQGHRLAGAERVGMAELADEPWIAGCPRCRRHLVEVCEGVGFTPRIDFATDDYPAVVGLVGAGLGVAVLPELAVESVRAKGVSTVAVEPAVEREVVALTLPDLARVPAVAATLAELERAAAR
>NZ_CP020039.1|WP_030011164.1|4943908_4944235_-|WhiB-family-transcriptional-regulator
MADFSRLPGPNADLWDWQLLAACRGVDSSLFFHPEGERGAARSAREASAKEVCMRCPVRSECAAHALAVREPYGVWGGLTEDEREELMGRARHRLIPASSAIGPIAPN
>NZ_CP020039.1|WP_003948568.1|4944614_4945226_+|response-regulator-transcription-factor
MTSVLVCDDSPLAREALRRAVATVPGVERVTTAANGEEVLRRWGADRSDLILMDVRMPGLGGVETVRRLLSADPGARIIMLTVAEDLDGVALAVAAGARGYLHKDASRAELRATVTQALADPTWRLAPRRLRSAEMGAAPTLTAREIQVLEGMSHGRSNAEIGRELFLSEDTVKTHARRLFKKLGASDRAHAVALGFRWGLVR
>NZ_CP020039.1|WP_030389108.1|4945586_4946216_+|sigma-70-family-RNA-polymerase-sigma-factor
MRDDEALGSPAATGPTGAAKGGSAGGVSALVRRAVEGDEQATHDLLAFVHPLAIRYCRTRLSRLPGDARHFVEDLAQEVCVAVLMALPRYRDTGRPFEAFVFAIAAHKVADLQRAAMRHPGSTAVPSDEMPERPDDSLGPEERALLSSDAAWAKKLLANLPENQRELLVLRVAVGLTAEETGQMLGMSPGAVRVAQHRALSRLRALAEQ
>NZ_CP020039.1|WP_030389109.1|4946444_4947944_+|IMP-dehydrogenase
MTADGVPDKFATLGLTYDDVLLLPGASDMSPDAIDTSSLISRNVRVNVPLLSAAMDKVTEARMAIAMARQGGVGVLHRNLSIADQANQVDLVKRSESGMVTDPITVHPDATLGEADQLCAKFRISGVPVTDAGGKLLGIVTNRDMAFESDRSRQVREVMTPMPLVTGKVGISGVDAMELLRRHKIEKLPLVDDAGILKGLITVKDFVKAEKYPNAAKDKDGRLLVGAAVGVAGDAYERAQALIEAGADFIVVDTAHGHSRLVGDMVAKIKSNSTVDVIGGNVATRDGAQALIDAGCDGIKVGVGPGSICTTRVVAGIGVPQVTAIYEASLAAKAAGVPVIGDGGLQYSGDIAKALVAGADTVMLGSLLAGCEESPGELLFINGKQFKSYRGMGSLGAMQSRGDQRSFSKDRYFQEGVGGDDKLIPEGIEGQVPYRGPLSAVVHQLVGGLRQSMFYVGGRTVPELQDRGRFVRITSAGLKESHPHDIQMTVEAPNYSRKG

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Crispr_ID: NZ_CP020039_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_16

5266289-5266441

Orphan

Consensus_repeat	Method
CGTTGCCGGGGGCGCTGCCCCCGGGCCCCCGCGCCTCAAACGCCGGCGGGGCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_16

>merge|NZ_CP020039|16|5266289-5266441|CRISPRCasFinder
CGTTGCCGGGGGCGCTGCCCCCGGGCCCCCGCGCCTCAAACGCCGGCGGGGCTGAAGGGGGTGCCGGTGGGGGTGCGGGTGCGGGGGTGGGTGCGGCGGCGTTGCCGGGGGCGCTGCCCCCGGGCCCCCGCGCCTCAAACGCCGGCGGGGCTG

>NZ_CP020039|16|14|5266289-5266441|CRISPRCasFinder
CGTTGCCGGGGGCGCTGCCCCCGGGCCCCCGCGCCTCAAACGCCGGCGGGGCTG	AAGGGGGTGCCGGTGGGGGTGCGGGTGCGGGGGTGGGTGCGGCGG
CGTTGCCGGGGGCGCTGCCCCCGGGCCCCCGCGCCTCAAACGCCGGCGGGGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_107084879.1\|5261290_5262334_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366286
NZ_CP020039.1\|WP_159395644.1\|5269474_5270644_+\|DUF4190-domain-containing-protein	unknown	unknown	gnl\|CDD\|379388
NZ_CP020039.1\|WP_079406001.1\|5255247_5255829_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP020039.1\|WP_079406009.1\|5267746_5269318_+\|S8-family-peptidase	unknown	unknown	gnl\|CDD\|173790
NZ_CP020039.1\|WP_053703077.1\|5279088_5279328_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079406013.1\|5276115_5276835_-\|PspA/IM30-family-protein	unknown	unknown	gnl\|CDD\|224755
NZ_CP020039.1\|WP_079406005.1\|5259385_5260399_-\|superoxide-dismutase	unknown	unknown	gnl\|CDD\|225921
NZ_CP020039.1\|WP_079406002.1\|5255970_5258064_-\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|280533
NZ_CP020039.1\|WP_037859984.1\|5260487_5260916_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP020039.1\|WP_030385842.1\|5272200_5272623_+\|(deoxy)nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|239517
NZ_CP020039.1\|WP_079406014.1\|5276874_5279040_-\|TPM-domain-containing-protein	unknown	unknown	gnl\|CDD\|377378
NZ_CP020039.1\|WP_079406007.1\|5265366_5266185_-\|isocitrate-lyase/phosphoenolpyruvate-mutase-family-protein	unknown	unknown	gnl\|CDD\|379346
NZ_CP020039.1\|WP_078937998.1\|5262497_5263580_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366286
NZ_CP020039.1\|WP_052873914.1\|5270781_5271534_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP020039.1\|WP_079406003.1\|5258464_5258845_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP020039.1\|WP_030385841.1\|5271975_5272161_+\|SPOR-domain-containing-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079406011.1\|5272777_5273206_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP020039.1\|WP_107470036.1\|5263576_5264368_+\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|365866
NZ_CP020039.1\|WP_079406012.1\|5273441_5276024_+\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP020039.1\|WP_079406004.1\|5258841_5259399_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368835

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_107084879.1\|5261290_5262334_+\|hypothetical-protein	gnl\|CDD\|366286	pfam00756, Esterase, Putative esterase. This family contains Esterase D. However it is not clear if all members of the family have the same function. This family is related to the pfam00135 family.	4.43423e-08
NZ_CP020039.1\|WP_159395644.1\|5269474_5270644_+\|DUF4190-domain-containing-protein	gnl\|CDD\|379388	pfam13828, DUF4190, Domain of unknown function (DUF4190). This integral membrane domain is functionally uncharacterized. One of the membrane helices contains two GXXG motifs that are usually associated with dimerization.	4.45177e-12
NZ_CP020039.1\|WP_079406001.1\|5255247_5255829_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.62071e-23
NZ_CP020039.1\|WP_079406009.1\|5267746_5269318_+\|S8-family-peptidase	gnl\|CDD\|173790	cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins. The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K.	6.71063e-120
NZ_CP020039.1\|WP_079406013.1\|5276115_5276835_-\|PspA/IM30-family-protein	gnl\|CDD\|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	9.94668e-21
NZ_CP020039.1\|WP_079406005.1\|5259385_5260399_-\|superoxide-dismutase	gnl\|CDD\|225921	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism].	1.98608e-10
NZ_CP020039.1\|WP_079406002.1\|5255970_5258064_-\|N-6-DNA-methylase	gnl\|CDD\|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	3.1542e-73
NZ_CP020039.1\|WP_037859984.1\|5260487_5260916_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	6.77249e-14
NZ_CP020039.1\|WP_030385842.1\|5272200_5272623_+\|(deoxy)nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|239517	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi). This enzyme requires two divalent cations for activity; one coordinates the phosphoryl groups of the NTP/dNTP substrate, and the other coordinates to the enzyme. It also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as metal binding and catalytic site. MutT pyrophosphohydrolase is important in preventing errors in DNA replication by hydrolyzing mutagenic nucleotides such as 8-oxo-dGTP (a product of oxidative damage), which can mispair with template adenine during DNA replication, to guanine nucleotides.	3.07014e-38
NZ_CP020039.1\|WP_079406014.1\|5276874_5279040_-\|TPM-domain-containing-protein	gnl\|CDD\|377378	pfam04536, TPM_phosphatase, TPM domain. This family was first named TPM domain after its founding proteins: TLP18.3, Psb32 and MOLO-1. In Arabidopsis, this domain is called the thylakoid acid phosphatase -TAP - domain and has a Rossmann-like fold. In plants, the family resides in the thylakoid lumen attached to the outer membrane of the chloroplast/plastid. It is active in the photosystem II.	5.48918e-16
NZ_CP020039.1\|WP_079406007.1\|5265366_5266185_-\|isocitrate-lyase/phosphoenolpyruvate-mutase-family-protein	gnl\|CDD\|379346	pfam13714, PEP_mutase, Phosphoenolpyruvate phosphomutase. This domain includes the enzyme Phosphoenolpyruvate phosphomutase (EC:5.4.2.9). This protein has been characterized as catalyzing the formation of a carbon-phosphorus bond by converting phosphoenolpyruvate (PEP) to phosphonopyruvate (P-Pyr). This enzyme has a TIM barrel fold.	1.58776e-83
NZ_CP020039.1\|WP_078937998.1\|5262497_5263580_+\|hypothetical-protein	gnl\|CDD\|366286	pfam00756, Esterase, Putative esterase. This family contains Esterase D. However it is not clear if all members of the family have the same function. This family is related to the pfam00135 family.	1.96087e-08
NZ_CP020039.1\|WP_052873914.1\|5270781_5271534_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	1.33168e-29
NZ_CP020039.1\|WP_079406003.1\|5258464_5258845_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	3.33009e-24
NZ_CP020039.1\|WP_079406011.1\|5272777_5273206_+\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	3.93617e-14
NZ_CP020039.1\|WP_107470036.1\|5263576_5264368_+\|trypsin-like-serine-protease	gnl\|CDD\|365866	pfam00089, Trypsin, Trypsin.	0.000634846
NZ_CP020039.1\|WP_079406012.1\|5273441_5276024_+\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	5.17066e-47
NZ_CP020039.1\|WP_079406004.1\|5258841_5259399_+\|hypothetical-protein	gnl\|CDD\|368835	pfam06304, DUF1048, Protein of unknown function (DUF1048). This family consists of several hypothetical bacterial proteins of unknown function.	0.000878034

>NZ_CP020039.1|WP_079406007.1|5265366_5266185_-|isocitrate-lyase/phosphoenolpyruvate-mutase-family-protein
MTTNVAPAAKATAFAALHTPTAPLALANAWDVASARIVEATGAPAVATTSAGVAWSLGSPDGDALARDRALDLVARVVSAVSVPVTADIEGGFGADPAAVGETVTGVIAAGAVGINIEDGHRDPAEQIERLAAARAAADAAGVPLYINARVDTYLRGFGESATRLDDTLARASAYLRAGATGIFVPGVLDPGTVAELAKGIDAPLNVLLGPDAPTVAALGALGVSRVSLGSWVAEAAYALVRRAAEELITDGTYGALAHSLAYSELNSLLKG
>NZ_CP020039.1|WP_107470036.1|5263576_5264368_+|trypsin-like-serine-protease
MSTVVKGASAAAAAGIAVLCAVAFIKAPGERPVFPFPTVGVLMAGGEHWCTASVVDSPKGNVVATAAHCVAPAGEDGRTGEVAHDGLAIGELSFAPAFSGEGAGTQPLGVWKVRSIHVDDRWTKWGEDTADFAFLTIEPDEDGRSVQEAVGGGAEAPKPEWTSGYERDVTVVGYPESEHNPQNKPVSCTTQTRHDEDDPDMLYMSCAGFWTGTSGSPWIADRGGPDPAGRLIGVLSGGDTDVDSTAALFDEHAKALYERAAGG
>NZ_CP020039.1|WP_078937998.1|5262497_5263580_+|hypothetical-protein
MQHDQQGDGSPMTEGGRRPHRLRMTLISGCLALALAGGGAAAYKYGLFSDIGDPVSFGKVQEKAVAAADVPPEVLMPTGPKASFVRTYRLPDGTQIGRTTLTGKKSGFTGDVWVWVPKEYDDPKYAHSGFPVLISLPGGRGYPTNYWGTGPGLGLQQAVSDGAKAGKSLPFILIMPVHNADTKHHFDASDIPGQPRMGTWMVEDIPDFTKANFRTWTSRDGWAFMGSSAGGFGAFKHVLKHPDRFKAAIASGVDIVPDSPLWKGNTQAMDADNPEKLAAKLIAAGGPDVYINFQIGTAESGRDKAEKFMNDFGKGPVHTSLQVIQDGEHNGKSYVRGMREGSLEWISKVMKGPTPDPAVR
>NZ_CP020039.1|WP_107084879.1|5261290_5262334_+|hypothetical-protein
MWISATVALALLLGGGGFAAWKLDWFSGNGEAVSFGKNTPPPAAGKTDPSAPATAATPTGDPDVLMPTGPKSDFKQTAKLEDGTIIAKTRLTGAKSGFEGNVWVWAPKEYDDPKYAKSAFPVLISLPGGNGFPDNYWSDRSLGLQKAISDGAKAGTSLPFVVIMPVLNPDAKYYYDGSDIPGQAKMGTWIAEDVPDFAKANFRTYKSRDGWAFMGSSSGAFVGMKTVLQHPDRFKAVIASGGEIVPDSPLWKGHQAEMDANNPEKLAQKLIDTKGPEVYINFQIGTKESGKERMTKFQQQYGKGPVKMTIRDIQNGEHNGWHYVRGMKEGSLEWVSKVLKGPKPEAG
>NZ_CP020039.1|WP_037859984.1|5260487_5260916_+|MarR-family-transcriptional-regulator
MAPEERIGSHLKRAEQALLAAKNAACKPAAVTVPQYAALLWLAEKPGISAAALARLCGVTPPTMNTVLKNLQERGLIERTPHEWHRNVLETRLTDEGRTVMELADSGAVRVERALAAAFTGEERELLIELLGRCAEVLDAQR
>NZ_CP020039.1|WP_079406005.1|5259385_5260399_-|superoxide-dismutase
MKTKSLLPAVLTMAAALTLGAAPAQAQGQARTAPGAGGDPRISTAFSLPGAKVYPEGIATDPRTHTVYVGSYADGTVYRAGPGRSEAEVFLPSGADGRHTANGLRVDARGRLWVTDSTTGVAVYDTADGSRLAHFEVARGAGAPDHFINDLTLTPDGTAYLTDSVRGVIYRVTPEQLAAGSGVLTEAYDLTPALRPRPAGGFSLNGIVSDPAGRYLLAVDMPMGDLYRVDLRSGAVRRVTLIGGDLKAADGLALSPDGTLRVAHNTTNTLTRWQVGPNGTRARLTRTLTDPSLQIPTTLTHTRGRTLVVRSQFDKGGPMSPGSGTPTTFTVAAVSGL
>NZ_CP020039.1|WP_079406004.1|5258841_5259399_+|hypothetical-protein
MTNEQILAACRSNWEYRGVDDAAMREMLDELSAHLEDAQAAGRTGRDVVGPDVRAFAAAWARERAPFARRVLRTLAMACYALGWLLLFAYLVRWTTRLDVTPHYVAALLALGAATVGWELRRGEMRFYQRWLLALAFGLPVAALTRWLAGDGVILTLPLWAAPILLLPMAPHAVADVRARRVTGR
>NZ_CP020039.1|WP_079406003.1|5258464_5258845_+|PadR-family-transcriptional-regulator
MTKESAVTGDQRRSQLLRGVLDLCLLSLIAERPRYGFEFTQALADGGLDLVSDGSIYPLLARMERAGLISSYRAPSPSGGAPRKYYRLTEAGRAELGGGRADWRAFVGPVGRILDAGTHSTGERTP
>NZ_CP020039.1|WP_079406002.1|5255970_5258064_-|N-6-DNA-methylase
METTDARSPAATVVDRLWRAYAPFQRGRGTDRDLAAMLAVLLLAGFLDSLDDPGDELVKRWSRATAEAQAGYSPLRDLREALLLATRHERFPVRAPWDVESVFADDREAPGGLPWAAGFLAALQQPPTATEAGLEEVSVLLLERYVAESTGQTGEYHTPRTLTRLLAESLSPQPGDRVLDPACGTGGVLVAAAQYIAEQGHAGDASFEGYAMDHRNPHLAMLNLAVHGIDRALVRASDPGSLFRSPGDGMADLVMSNPPFNQRVQGLDHLGWPFGSPPESSANFAWLQLAWTRLSDKGKAAVIMPSGAAFARGREAEIRRRMLVAGTLLAVVALPAGLFAHTTVPVHLWLLARDKSHHVPVGEADSVLFIDASQLGTQAPRQARVLGPADGERISSRFHAWLRSPRTTADEPGFSRSVPYAEILENDGCPLDPRLYVAPSREHPPAARDTHRLLDELMGLAESAAGATARLHESFDRSERVARNEAAAPRVPLRRLVEGTAKGSLGAPAPGLLLAGPSGSLIRADDYVEADGVPVVMPRDLTGNGFSTASIRYVSERHASQLARFRLRAGDVVLARRGELGRAAVVRDEQHGWLCGTGCFMLRPPGTLDADYFAAYLRGPEARTWLENHSTGSMKMQTISLGVLGELPVVLPDLATQRAIADTVTQLDEYERLLRGQLDLTRRIRHGALDGGIIPSP
>NZ_CP020039.1|WP_079406001.1|5255247_5255829_-|Uma2-family-endonuclease
MTALPDWMRPPRAEGWFAEDLDHLPEAPRHTELIDGVLVFMMSPQRSWHGRLLTALTTTLMAQAPAGFEVEREMTIRLDARNRPEPDLLLTVLPYDPDRTWYAPEDVKLVVEALSPESAHRDRTVKLRKYAEAGIPHYWCIEDEDGAPVVHVYELDEPTGAYAPAGIFRGTLKRPVPFEINLDLDTLTPPRNS
>NZ_CP020039.1|WP_079406009.1|5267746_5269318_+|S8-family-peptidase
MPVMRHTRRRFAGISATAVVALALGSASALPASAVGGGTAGVVQNVGAPGSIPGSYIVTLKDSAARSTAASGQAVAKRYGAKIDKTYSAALNGYAVKLSEAQAKKLAADPAVTSVVQNRTFTVSTTQPTPPSWGLDRVDQGALPLNQSYSYPDKAGEGVTAYIIDTGVRITHQDFGGRASYGYDAIDNDSTAQDGHGHGTHVAGTVAGGSYGVAKKAKIVGVRVLDNSGNGTTAQVVAGIDWVTRNAVKPAVANMSLGGGADSALDAAVRNSIASGITYAVAAGNESSNASTKSPARVTEAITVGATTSTDVRASYSNFGTVLDIFAPGSAITSAWGTGDTATNTINGTSMATPHVAGAAAVYLSQNPASTPTQVATALVGSSTPNVVGGGGTGSPNRLLRVVAQGPVPPGKRFENTADQAVGDNATAESSITVSGVVGNAPSALQVPIDIKHPYIGDLKVDLVAPDGSVYTLHNRANGGDDNIIRTFTVNASAETANGVWKLRVNDNSTGDTGKIDSWALQF
>NZ_CP020039.1|WP_159395644.1|5269474_5270644_+|DUF4190-domain-containing-protein
MSTPPTPPPGPGHSWPPPSPWPGWGPQPGQGQHPPALNGFALASLLSGLLCFPPLGVAFGIAALVQISKRGDRGRAMAITGLVVSVLMTGALVLAAERVLAAVDDRVAPLSEYADVEGDLTDLSDLRPGDCFNVPGGDLIDERPVTYRIDCAQVHHGEVTASKVLETVDGPESADSDRDSEDACWKAQDEYAMDTWALPEYAEMFYYAPSRQSWHQGDRVLLCVIGTTDEEWRGSLRRDAGMLKPEQSAFLRAANAVEFVMSRPPEDDVEDALPEYQAWARAVSAALGTEAKLLQGDVARAGLEKAAPAQLKEIEAARAEWQRAAQAKTAQEFDRQWDRALAAMSVETEKELRGAYGLSTVIPQWLQDGQDDLEEGDDGSLDGPSAESV
>NZ_CP020039.1|WP_052873914.1|5270781_5271534_+|GntR-family-transcriptional-regulator
MTFGEQPAYLRVAGDLRRKIVDGSLPPHARLPSQARIREEYGVSDTVALEARKVLMAEGLVEGRSGSGTYVREQPVPRRVARAGYRTGGASTPFRQEQADAGARGTWESSSEQTGAPTEIAKRLGIEPGERVMRTRYVFRDAGEAMMLSTSWEPLAVTGRTPVMLPEEGPLGGSGVVDRMAAIDVVVDNVVEEVGARPGLAEEIMLLGGVPGHVVLVIGRTYYASGRAVETADVVVPADRYRLAYHLPVR
>NZ_CP020039.1|WP_030385841.1|5271975_5272161_+|SPOR-domain-containing-protein
MNDSGALLPWLVIREDDNGNRYRVGRYATRAEAQKVADSLDDRGHKQLYWVERMGRTATMN
>NZ_CP020039.1|WP_030385842.1|5272200_5272623_+|(deoxy)nucleoside-triphosphate-pyrophosphohydrolase
MTVRVVVGGALCHEGRLLAARRSAPPELAGRWELPGGKAEPGESVPEALVRELREELGVETEPLERIPGEWPLRPGLVLHVWTARLLSGVPAPLEDHDELRWLGPEELESVDWLDQDRPAVAEAGRRLLRDGGRGSGGGA
>NZ_CP020039.1|WP_079406011.1|5272777_5273206_+|ATP-binding-protein
MIGVIDTDGECAEWAFPAEPGAVRTARHAVRGTLHAWGLESVGDVTVLLVSELVTNSLRYASGPIGVRLERRNPAADSPSAAPALLVEVSDPLPDPPRERVADHDDEGGRGLHLVAVSSQRWGTRHGKSGKTVWFELALPGE
>NZ_CP020039.1|WP_079406012.1|5273441_5276024_+|SpoIIE-family-protein-phosphatase
MPRETWHDALWHSSPPGSIYDYIKVASFSIGPDGFIDQWSLRAEELFGLTASQTVGRDPVDAFMPPELRPDAHRKVAEILDGKEWTGLIPFRIPGGNGAHGVAEIYVMPTQTATAERAALCVVVDVRALRRIESDLAASQAIFGQSPFGFLLFGTDLTVQRANRRFATVFGGAAEEHRGRTVHDYLPAHEADRMADALRRVLDTGESVTDLRITGATPGSRENRHWSINLYRVHGGSGRPIGVAGIGTDVTRRHLAAREAAGVRRNLALLNEAGHRIGNSLDLETTARELLDVTVPGFCDLAAVDLYQGLLLGDDDRPARPQGPGVPSLPGQGPARIPSAALRRVAFASAVSDAPLSGPGALVSVGDIHRYPAASPGALALRTARPRLIEGGGPEDLVQSTLVVPMVAHDTVVGLAQFSRTKGSEPFGERDRAVAVELAARAAVCIDNARLYRREHERALILQRSLLPPGDPEAAGLDIACRYLPGNAATEVGGDWFDVIELPGHRTALVVGDVMGRGLRAAVAMGELRTAVRTLALLDLEPAEVLTALDEIARGLGAPGGSQQASRAALHSRDADRSEVYLATCVYAVYDPVTRRCTIANAGHMPPVLVEPPDEAGVPRPALLLEVPPGMPLGVGGEPFEEVEVDLPEGALLALYTDGLVESRDHPLEEGLRGLREALADPVRPLEDVCDHVLNTLDTRHGEDDIALLMARVQGLPVDAVGDWQLPREARSVGRARELARAKLPAWGLEGLLDTTELLVSELVTNALRYGEGEIRLRLLLDRTLVCEVWDANLVQPRRRRARDTDEGGRGLQLVGLLSAGWGTRRTHRGKTVWFELPLPGAAAEAVAELSAEQLLSMYG
>NZ_CP020039.1|WP_079406013.1|5276115_5276835_-|PspA/IM30-family-protein
MSKQTILGRVTQLAKANINALLDQAEDPQKMLDQLIRDYTNNISEAEQAVATTIGNLRMLEADHKEDVEAAAEWGGKALAASRKADELRAAGSAGDADRFDNLAKVALGRQIRSEKEAAVAEPTIAAQTSVVEKLKSGLDSMRDKLTELQSKRDELVARAKTAQAQNTMMDAVKSIDVLDPTSDLNRFEEKVRREEAMALGKQELAASSLDAQFEALDDLDRASEVDARLAALKQGRAA
>NZ_CP020039.1|WP_079406014.1|5276874_5279040_-|TPM-domain-containing-protein
MRVRETAHTLPNVNPPRSQPTSQVCVRAGLALAAGLLAVGGWGFAQAPAARAEDPVTLSQQGQITDRVGALGDRQGAVTAALDNLYADRRIQLFVAYVRDFSGRSAQSWADATAQRNGLGQNDVLLAVATGARQYAYSADVDSGFTEQQLATVARTAIEPALKQNDWAGAAIGAANGYNAVLGGQPVPVPTITPGPADPGGKAGGESGAGDFVLPVVAVGAAGALAAYTYTRRKRKVAAGGGRGTTTGPGWPEGAPDRLPLPELDAGAKALLVDTDDAVRTSTEELGFAIAQFGEEATRPFVAAVEYAKDELTHAFRLRQQLDDAYPEDDATRRRMLDEIVARCTEANRRLDAESADFDRLRDLEKNAPQALATVEAHVGDLTGRTATARATLTALAGRYADSASAPVVSNAEQAEDRLLFATTNLGRARAALDAGENGTAAVHVRAAEGAVDQAATLVDAVERRAQELAEAAGKLPGALTETDTDLADARGLLTGTAEGTSTADLRGRIGRAEAVLADVRREEAAGRYDPIDALRRVEEADAALDEALAGARERESGRQRAVALLDQAVLAARSAIGAATDYITTTRGAVGSQARTRLAEAGRHLERAVSVAQADPAGALAEAQRADMLARQAQELAEQDVRAYQDPYGGRRAGGGTGGAVLGGIILGEILRGGRGGGGFGGGFGSGGGGGFGGGGGGGSGPGSFGGGGTRGRMGGGGRF
>NZ_CP020039.1|WP_053703077.1|5279088_5279328_+|hypothetical-protein
MKKIMTAAVLTLAALSLTAPAHADNDSNFGGGVNAANNWNFTAAAVCLQEVAVVPVLGDWVGDHANNCSNGNVIDHSGA

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Crispr_ID: NZ_CP020039_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_17

6069938-6070011

Orphan

Consensus_repeat	Method
GCCAAGAAGGCGGCGGCGAAGAAGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_17

>merge|NZ_CP020039|17|6069938-6070011|CRISPRCasFinder
GCCAAGAAGGCGGCGGCGAAGAAGACGGCGGCGAAGAAGGCAGCACCCGCCAAGAAGGCCGCGGCCAAGAAGAC

>NZ_CP020039|17|15|6069938-6070011|CRISPRCasFinder
GCCAAGAAGGCGGCGGCGAAGAAGAC	GGCGGCGAAGAAGGCAGCACCC
GCCAAGAAGGCCGCGGCCAAGAAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_030389438.1\|6072924_6075045_+\|type-IIA-DNA-topoisomerase-subunit-B	unknown	unknown	gnl\|CDD\|235501
NZ_CP020039.1\|WP_079406347.1\|6077304_6078015_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP020039.1\|WP_030389433.1\|6065399_6066146_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|223979
NZ_CP020039.1\|WP_079406345.1\|6071206_6072133_+\|serine-protease	unknown	unknown	gnl\|CDD\|238113
NZ_CP020039.1\|WP_079408071.1\|6082302_6083406_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_CP020039.1\|WP_053173352.1\|6068276_6069146_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP020039.1\|WP_051779728.1\|6075220_6075709_+\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|377315
NZ_CP020039.1\|WP_079406340.1\|6058692_6059322_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079408070.1\|6078011_6079628_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP020039.1\|WP_107470060.1\|6081096_6082248_+\|citrate-synthase/methylcitrate-synthase	unknown	unknown	gnl\|CDD\|99862
NZ_CP020039.1\|WP_030389427.1\|6057121_6057832_+\|ribonuclease-HII	unknown	unknown	gnl\|CDD\|234574
NZ_CP020039.1\|WP_079406343.1\|6066283_6068065_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP020039.1\|WP_079406342.1\|6063290_6065279_+\|glycogen-debranching-protein	unknown	unknown	gnl\|CDD\|373262
NZ_CP020039.1\|WP_079406346.1\|6075705_6077298_+\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|271374
NZ_CP020039.1\|WP_079406341.1\|6059536_6061696_-\|RecQ-family-ATP-dependent-DNA-helicase	unknown	unknown	gnl\|CDD\|223588
NZ_CP020039.1\|WP_107470059.1\|6061816_6063082_+\|DUF4192-domain-containing-protein	unknown	unknown	gnl\|CDD\|379390
NZ_CP020039.1\|WP_079406348.1\|6079775_6081017_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|376311
NZ_CP020039.1\|WP_079406338.1\|6056403_6057006_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379883
NZ_CP020039.1\|WP_079406339.1\|6057891_6058536_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP020039.1\|WP_030016583.1\|6072242_6072476_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_030389438.1\|6072924_6075045_+\|type-IIA-DNA-topoisomerase-subunit-B	gnl\|CDD\|235501	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed.	0
NZ_CP020039.1\|WP_079406347.1\|6077304_6078015_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	8.29459e-70
NZ_CP020039.1\|WP_030389433.1\|6065399_6066146_+\|NUDIX-hydrolase	gnl\|CDD\|223979	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism].	2.03064e-27
NZ_CP020039.1\|WP_079406345.1\|6071206_6072133_+\|serine-protease	gnl\|CDD\|238113	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.	9.65692e-64
NZ_CP020039.1\|WP_079408071.1\|6082302_6083406_+\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	1.05713e-71
NZ_CP020039.1\|WP_053173352.1\|6068276_6069146_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	3.12259e-43
NZ_CP020039.1\|WP_051779728.1\|6075220_6075709_+\|DUF485-domain-containing-protein	gnl\|CDD\|377315	pfam04341, DUF485, Protein of unknown function, DUF485. This family includes several putative integral membrane proteins.	1.25511e-27
NZ_CP020039.1\|WP_107470060.1\|6081096_6082248_+\|citrate-synthase/methylcitrate-synthase	gnl\|CDD\|99862	cd06109, BsCS-I_like, Bacillus subtilis (Bs) citrate synthase CS-I_like. CS catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or Krebs cycle). 2MCS catalyzes the condensation of propionyl-coenzyme A (PrCoA) and OAA to form 2-methylcitrate and coenzyme A (CoA) during propionate metabolism. The overall CS reaction is thought to proceed through three partial reactions and involves both closed and open conformational forms of the enzyme: a) the carbanion or equivalent is generated from AcCoA by base abstraction of a proton, b) the nucleophilic attack of this carbanion on OAA to generate citryl-CoA, and c) the hydrolysis of citryl-CoA to produce citrate and CoA. This group contains proteins similar to BsCS-I, one of two CS isozymes in the gram-positive B. subtilis. The majority of CS activity in B. subtilis is provided by the other isozyme, BsCS-II (not included in this group). BsCS-I has a lower catalytic activity than BsCS-II, and has a Glu in place of a key catalytic Asp residue. This change is conserved in other members of this group. For E. coli CS (not included in this group), site directed mutagenesis of the key Asp residue to a Glu converts the enzyme into citryl-CoA lyase which cleaves citryl-CoA to AcCoA and OAA. A null mutation in the gene encoding BsCS-I (citA) had little effect on B. subtilis CS activity or on sporulation. However, disruption of the citA gene in a strain null for the gene encoding BsCS-II resulted in a sporulation deficiency, a characteristic of strains defective in the Krebs cycle. This group contains proteins which functions exclusively as either a CS or a 2MCS, as well as those with relaxed specificity which have dual functions as both a CS and a 2MCS. Many of the gram-negative species represented in this group have a second CS isozyme which is in another group.	3.59199e-153
NZ_CP020039.1\|WP_079408070.1\|6078011_6079628_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	5.80878e-128
NZ_CP020039.1\|WP_030389427.1\|6057121_6057832_+\|ribonuclease-HII	gnl\|CDD\|234574	PRK00015, rnhB, ribonuclease HII; Validated.	1.61009e-82
NZ_CP020039.1\|WP_079406343.1\|6066283_6068065_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.36727e-40
NZ_CP020039.1\|WP_079406342.1\|6063290_6065279_+\|glycogen-debranching-protein	gnl\|CDD\|373262	pfam14742, GDE_N_bis, N-terminal domain of (some) glycogen debranching enzymes. This domain is found on the N-terminal of some glycogen debranching enzymes and is usually followed by the GDE_C (PF06202) and in this sense it is analogous (but probably not homologous) to the GDE_N (PF12439). Its exact function is unknown.	3.20994e-23
NZ_CP020039.1\|WP_079406346.1\|6075705_6077298_+\|cation-acetate-symporter	gnl\|CDD\|271374	cd11480, SLC5sbd_u4, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain. SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	1.44044e-177
NZ_CP020039.1\|WP_079406341.1\|6059536_6061696_-\|RecQ-family-ATP-dependent-DNA-helicase	gnl\|CDD\|223588	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair].	1.77984e-126
NZ_CP020039.1\|WP_107470059.1\|6061816_6063082_+\|DUF4192-domain-containing-protein	gnl\|CDD\|379390	pfam13830, DUF4192, Domain of unknown function (DUF4192).	1.65247e-74
NZ_CP020039.1\|WP_079406338.1\|6056403_6057006_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	1.17775e-16
NZ_CP020039.1\|WP_079406339.1\|6057891_6058536_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	2.09054e-07
NZ_CP020039.1\|WP_079406348.1\|6079775_6081017_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|376311	pfam00285, Citrate_synt, Citrate synthase, C-terminal domain. This is the long, C-terminal part of the enzyme.	2.80355e-69

>NZ_CP020039.1|WP_053173352.1|6068276_6069146_+|FadR-family-transcriptional-regulator
MMTAARHAADSGLAGPGELDRYPYAETPGSDRVGVPHWDGADVELSRVGRRAAGSRGRGLHGQLVQQLGQMIVSGDLGADRPLVPEEIGQRFEVSRTVVRESLRVLEAKGLVSARPNVGTRVRPVADWNLLDPDIIEWRAFGPQRDDQRRELGELRWTIEPLAARLAAGHGRPDIQQRLADMVEIMGHALGQGDAITFARADNEFHALLIQVAGNRMLEHLSGIVSAALQVSGSPITACDRPSEAGVAHHARMVEALAAGDATGAENAMRQLLTVHPEVERVVPAPREH
>NZ_CP020039.1|WP_079406343.1|6066283_6068065_+|ATP-binding-cassette-domain-containing-protein
MLQAIGLTSKTRPDVPPLVDDLTFEARPGHVTALLGEPGSGKTTALRLMLELEPGRGVTYFRGRALHRIPHPGREVGVLLGDVPGNPARTVRNQLRMLCAAAGVPASRADTMLEVVGIGGLRDQRLGSLSLGMERRVALASALLADPCTLLLDEPGAGLSPRERGWLHGLLRGHASLGGAVLFTTDDAKEAARSADRVVSIEAGRLVADQDAADFARTRLRPRVAVRTPHAARLADVLGREARAARRSVEIVAESGSRLSVYGSNCAEVGEAAFRHGVLVHQLADETGDAGAPTAPVPAARTEAGAPPEAGADPAGTAREHPRQLRSGRPASAVRRVGGPLRPLRYELLRVFGTATPVLTAALVVVVSVLTALVLARLGQTPQNRLLAAWPELLPLPPAALGAGLLGALAFGEEYRYPALAADRGTVPRRMGLLTAKLGVCAALALLLGALTVVADAAALALVFDSGPLRTPVEWLSPAASWAGLLIGCAWAGVLASGVFRSATAGLAAVLAVPVMVVPLVRKALEGTSAYPSTGLGPRLRGLTWGQWPPEVDRLLVGALRVMAQPVGTALVLSLMVLLCAYGFTGLRSRVRW
>NZ_CP020039.1|WP_030389433.1|6065399_6066146_+|NUDIX-hydrolase
MSPYDPSAYPPFAVTVDLVVLTVRRHALCALVVRRGEQPFQGRWALPGGFVRGDEDLAGAAARELSEETGLCAHDPALPGAGNGAHLEQLATYGDPKRDPRMRVVSVAHLVLAPDLPAPRAGGDANSARWAPVDEVLADTGEDTTGLAFDHARILADGVERARSKIEYSSLATAFCPPEFTVGELRRVYEAVWGVSLDPRNFHRKVTGTPGFLVPAGGTTTRQGGRPAQLFRAGGATLLNPPMLRPEV
>NZ_CP020039.1|WP_079406342.1|6063290_6065279_+|glycogen-debranching-protein
MSHPAPPRPAGVPAARRSELPPVHGAVICVAAPCLVISPEHGQLTGRGIDGIYRSGRRLLSRCVLRVGGRDPVAVLGRSLGADRAAFTATVRTGAEPGPDPDIGVERVRHADGTERITLRSFTARPLRLPVEVLLGTDLAELAAVAAGRAGPELPAGVHAAGLRWSTGDAQAVTAAEPPPDDALASAGLLRWQLDLAPGESRTIELRTTQHRAVRASAGQVANPLADARAEGDEPRAEAWFRTSVEDLGALLLRDPEVPGDAFAAAGAPWRLGLAPAESLWAARMALPLGTGLAAATLRILARTQTEERGPGLGRIPGPLRGAGAQLPPGCTGTEATLAFPAVLAEARLWGMPEDEVARLLPAAERCLDWLRGALGEDGLLADPDPGPRRCETQAHAHRAAVLGADLLAACGRPGADEWREWAAALRERFRAGFWIDGPDGGRPASALHPDGRPLPRLTGAAAHLFDTGLLSGGRLAPGLLDRTRAEQLARLLGAPAMDSGWGLRSMAVKEPGHNPFGHRSGAVRAYESAVAVAGLAAAGFEKEAAGLLRGLLDAAESFGYRLPEMFAAEQRTAGSAPVPHPAACRPAAVSAAAGVHALTALAGIRPDAPAGTVALVPLPGAPLGALRLSGLRVAGEPFAVRISRLGLGMVEEAADALQLGG
>NZ_CP020039.1|WP_107470059.1|6061816_6063082_+|DUF4192-domain-containing-protein
MTNNHESRIPSDRPSISPSGAATGPQITLRSPAELADALPYMLGFHPTDSLVMVAVHGEGGRFGGRLRVGIPSTPAEWEDTARQVADCLIRGSERRAGKPDGIVVYLCQEPAGEEDGRRVMDRLRPLAQRIRLACGALDVPVLEALCLSAGRFWSYVCPDERCCPAEGTRLAAVGTSVLAATATFAGLQVRGSLKEIEGRLAPLRGAVADEAERALDRAAAVLVPRILDGTTREEVGAETIALARALMRRMTLAPPVEGGALGDDWDDALLRHDEAASLILGLQDREIRDIAAEWMEDEEAAPALRLWRALARRCVGAYAEHAAAPLTLAGWVCWSTGDEPTARIAFGMALRADAEYRFAQLLHHACNEGIDPEGLRQCLREERRRREPRRGRSSAGTRPPGRRGRAASRRGSRRTARSEQ
>NZ_CP020039.1|WP_079406341.1|6059536_6061696_-|RecQ-family-ATP-dependent-DNA-helicase
MNADLRSSADSVLARLVGDPTGAARLREDQWRAIEALVAHKRRALVVQRTGWGKSAVYFVATSLLRASGAGPTVIVSPLLALMRNQVEAAARAGIRARTINSANPEEWEGIQAEVAAGEVDVLLVSPERLNNPDFRDQVLPKLSAATGLLVVDEAHCISDWGHDFRPDYRRLRTMLADLPPGVPVLATTATANARVTADVAEQLGTGAGTDALVLRGPLDRESLSLAVLTLPDSAHRLAWLADHLGDLPGSGIIYTLTVAAAEEVTTYLRHRGHTVSSYTGKTENADRQQAEDDLQANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGREDEAIWQYFASVAFPPEEQVRRTLDVLAQAGRPLSLPALEPLVDLRRTRLETMLKVLDVDGAVHRVKGGWTSTGEPWAYDAERYAWVARQRATEQQAMRDYAAATGCRMEFLRRQLDDEEAAPCGRCDNCAGARFTAEVSTTALDTARGELGRPGVELEPRKMWPTGLAAVGVDLKGRINAGEQASTGRALGRLSDIGWGNRLRPMLAPQAPDQAIPDDVAQAVVAVLADWARGPGGWASGAPDAPARPVGVVALPSRSHPQLIGSLAARIAEVGRMPLLGTLAYTDQAPEFGSVSSNSAQRVRGLHQSLTVPPALAEALAGAAGPVLLVDDRAESGWTLAVAARLLRRAGAKEVFPLVLALQG
>NZ_CP020039.1|WP_079406340.1|6058692_6059322_-|hypothetical-protein
MTFGFAPPPTTSLATATGGTSRHGRLLEPAEWTAAGIPLLRNPREVVSGLHSRHSPVPSTAVIAVLGPEEQLVASASFVQRTASADGWEYRNALLSRLRRVLPHDLRRRTPVRTAVLLYCREGDERWTEEDGAWMWGLRDACTLHGLRCGAYITLTRGGWQVLGEGRGGRRPNSDSRPQHLGDTVAEFSPLALHTGGGSAEVLRRTAAR
>NZ_CP020039.1|WP_079406339.1|6057891_6058536_+|hypothetical-protein
MPLTPAIEEPQIHESAQGPRVTPAASRTAQTPRPVPGPRPAAVPRPGRPGPARPAPPAQRAPQATPGPVPAAPAAAPTAPSVSAAVPQIQLIPASAEGALDAAEEAVDLLLDTGRAPGDILVLTSGDPHPWAAHELSFGEAAYWALHDAGDDVFYADAAQVQRAAGRPVVVFAANGGAVDAIAGALPVALTRAGALLIVCGDPQQINSVLGAGV
>NZ_CP020039.1|WP_030389427.1|6057121_6057832_+|ribonuclease-HII
MPYEAPTHTVERSLRATTGAKVIAGVDEVGRGAWAGPVTVCAAITGLRRPPAGLTDSKLLTPKRRDALLDVLEGWVTAYALGHSSPEEIDELGMTAALRLAAERALGALPVRPDAVILDGKHDYLGPPWRVRTVIKGDQSCIAVAAASVIAKVRRDRMMAALGEQGGGIEDFAFAANAGYPSPVHRAALEELGPTPYHRLSWSYLDALPRWRHLKKVRRSEESMELENGGQLGFDF
>NZ_CP020039.1|WP_079406338.1|6056403_6057006_+|TetR/AcrR-family-transcriptional-regulator
MVGSRWSPASPGRRRGPELERAILDAALEQLSTIGWNALTMEGVAAGAHTGKAALYRRWPSKADLVADALRTGLPRIGDIPDCGSVREDLYLLCARTRDVMHSRAGQALRSVLHECDHMHADRFHGVIWSGLHEPAQRLIRELVGRGIDRGDVRPDATGPFVVDVIPAMLMYRAKVCGSEWEDADIAALIDEVMVPLLRV
>NZ_CP020039.1|WP_079406345.1|6071206_6072133_+|serine-protease
MRRPFARALAGALTLAAGAAAAPFAQVPQAAADSVVIGGKPVKVADSPWVVALASRDRFGGTRGGQFCGGVVVAPTRVVTAAHCLSAQVLGGPVESVADFRVIAGRTELRAADGREIAVRGARVNPAYDPVSNAGDLAVLELAEPVPAHHVLPMAETGHGAYAAGTGAAVYGWGDTSGFGDYAYALRAAAVTVLADEVCVRAYPGDADGQYRAESMVCAGDSGGGKDACQGDSGGPLVAQGRLIGLVSWGRGCGRADSPGVYTRIAPLVDFVLAPETGSQPGEVREVRWGSHRASGADAGPVQGHRAP
>NZ_CP020039.1|WP_030016583.1|6072242_6072476_-|hypothetical-protein
MTTVLTPATPLTAADRCDRCGAQAYLRVVLLSGGELLFCAHHGRKFEPELKKIAAEIQDETERLTSAPAANAEPEDR
>NZ_CP020039.1|WP_030389438.1|6072924_6075045_+|type-IIA-DNA-topoisomerase-subunit-B
MTADTSVPSSALLSGADRDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEIIDNSVDEALGGYCDHIEVILHEDASVEVRDNGRGIPVDVEPKTGLSGIEVVMTKLHAGGKFGGGSYAASGGLHGVGASVVNALSARLDVEVDRNSSTHAISFRRGVPGMFTEQGAESPFDPANGLRKVKRVAKGKTGTRVRYWADRQIFLKDARLNLDTLYQRARQTAFLVPGLTLVVRDERGIDGAGKTEETFRFDGGISEFCEYLAQDKAVCDVLRLSGTGTFKETVPVLDDRGHMTPTEVTRELGVDIALRWGTGYETNVKSFVNIIATPKGGTHVSGFERSVAKTVNEVLRSAKLLRVAEDDVVKDDAMEGMTAVVTVRLAEPQFEGQTKEVLGTSAATRIVAAVVAKELKAFLTSTKRDDKQQARAVMEKIVAAARTRIAARQHKEAQRRKTALETSSLPAKLADCRSDDVDRSELFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKSSISDMLKNAECGAIIQVIGAGSGRTFDIDAARYGKIVLLVDADVDGAHIRCLLLTLFQRYMRPMVEAGRVFAAVPPLHRIELVQPKKGQDKYVYTYSDNELRQTLLEYQRKNIRYKDSIQRYKGLGEMDADQLAETTMDPRFRTLRRINIGDLDSAEQVFDLLMGNEVAPRKEFITSSAATLDRSRIDA
>NZ_CP020039.1|WP_051779728.1|6075220_6075709_+|DUF485-domain-containing-protein
MDKHEGRDTGTIRLDDPWYDALAVGWGEGEETSQPAPAPGGGRPAPGASDIYLEVQRSPAFQEVRSRYRRFVVPATTGFFLWYVAYVVAATAAPGLMARPVVGAVNVAMLAGLGQFLSTFLLTWAYARHARLRRDRAALDLRWTVFEQERGQERNRARRAGR
>NZ_CP020039.1|WP_079406346.1|6075705_6077298_+|cation-acetate-symporter
MTTEHQTLALILFSLFIAVTLGITTWVSRNRHGSAEEFYAGGRLFSPMENGFAIAGDYMSAASFLGISGLIALFGYDGLLYSVGFLVAWLVVLFLVAELVRNCGRFTLADVVAARMSERPVRIAAGTSSVVVSVLYLIAQMVGAGSLVGLLLGSSGPVARTLAVVGVGALMVIYVSFGGMRATTWIQIVKAVLLMGGAITLTVLVLLRFHGNFDQLLTSAADRSGHGRAFLSPGLKYGGDWTARIDFMSLGLALVLGTAGLPHILSRFYTVPTARAARRSVVWAIALIGGFYLMTIVLGFGAAALVGPDEVRASNASGNTAVPLLAAFLGGGAGSTGGAVLFAFVAAIAFATILAVVAGITLASSASVAHDLYASLKRRHARQRSEVAVARVAAVGIGAVAIALGLLAQNLNVAFLVGLAFAVAASANLPVLLYSLFWRGFTTRGAVWSVYGGLIPAVLLVLVSPVVSGSAESLFPGVDFQYFPLQNPGIVSIPLGFLAGWLGTVTSREEPDEAKHAETEVRSLTGAGAV
>NZ_CP020039.1|WP_079406347.1|6077304_6078015_-|response-regulator
MSGTPSRVHVVLVVDDDTRVARINAAYVAKVPGFRVTAQAHSAAEALEFLATHPVDLVLLDHYLPDENGLDLVRRLRQLGHRTDVIMVTAARDLATVQAAMRLGALQYLVKPFTFAGLRTRLEAYASLRRALDTGGEAEQAEVDRIFGALAAAGSSNELPKGHSATTAELVRQVLLSAEGPLSTQQIADRAGISRQTAQRYVKLLERTGRVSLALRYGETGRPEHRYTWLPSEGPA
>NZ_CP020039.1|WP_079408070.1|6078011_6079628_-|sensor-histidine-kinase
MRFPLMSARRLGLPRRAVSQILLTQLAIAAGVVALATGLFLAPLSSQLDDQAMRRALAIAQSAAADPSLAAGLLASGPSPDSPVQASAERIRRATGAEYVVVLDLDGIRRSHPSADRIGLPVSTDPSDALAGREVMEIDDGTLGRSARGKVPLLAADGEIVGAVSVGIAYDSVRDRLLGAIPGLLAYAGGALAAGALAAYLLSRRIQRQTRDLAFSDIAGLLAEREAMLHSIREGVIALAPDGRVRLVNDEAARLLGLAPDAADRCAGRPLDDVLGAGRTADVLSGRVTGRDLLTVQGPRVLVANRMPTEDGGAVATLRDRTELERLGRELDSTRGLIDALRAQDHEHANRLHTLLGLLELGLHEEAVEFVTEVAGVHRTTAEQVTEKVHDPLLAALLVGKATVAAERGVPLRLAGTTLLPDRLVDPGGLVTILGNLVDNALDAAAGSAAPLVEVELRAEGRTAVLRVRDSGPGVPAARREEIFTEGWSTKQPRAHRERGLGLALVRRLAERQGGSARAGEAEDGGAEFSVVLPEALR
>NZ_CP020039.1|WP_079406348.1|6079775_6081017_-|helix-turn-helix-domain-containing-protein
MSDQTDGGRRLSTQEAARALGVKPATVYAYVSRGQLTSRRDPAGRGSSFDAAEVEALARRSRREAAAPTGDLTVRTALTLIEPDRYYFRGVDAVELASRYRYEEVAEWLWTGAIAPGARFTAPPQALAAARRAVAALPEHGGPIDRLRVAVAAAAVADPLRFDLSEEAVLGSARALVPTLVGALPAAGPDGWAGDGRIARQLWSRLTAREPDPDALAVLDLALGLLVDHDLAASTLAVRVAASARAHPYAAVSAGLGALEGPLHGAAGRLAHRMLVEVLEQGGAAPVVAEYLRAGRRVPGLGHRLYQGEDPRARALFARLETLEQAGPALGAAREVAAVMARQGGLHANVDLALAVLTVSCGMPAEAGETVFAVARTAGWIAHALEEYQERPLRMRPSGQYHGPRPPQPVPEP
>NZ_CP020039.1|WP_107470060.1|6081096_6082248_+|citrate-synthase/methylcitrate-synthase
MDSTLEVPRGLAGVVVTETGLGDVRGREGFYHYRQYSAVELAATRGFEDVWHLMFRGTLPVDAAERAAFTAEIAPLRRLPQEVRDALPDLARATRLSGPLAGLRTALSLLGASAGFRPVYDLDPGRRAADALAACAAVPTLLSALHRLGQGLEPVEPRDDLPYAANYLYMLTGREPDPARARAVEQYLISTVDHGFNASTFTARVIASTGADVAACLTGAIGALSGPLHGGAPSRALDTLDAIGTVDRIGPWIRERVLAGDRIMGFGHPVYRTEDPRSRMLREIALRFGGPLVDFAVEVERQVEEILAELKPGRELHTNVEFYAGVVMELCGLPREMFTPTFCAARVVGWSANILEQAADSKIIRPAARYTGPTPPQPVPLLP
>NZ_CP020039.1|WP_079408071.1|6082302_6083406_+|GTP-binding-protein
MNSRQPIPVVVLAGFLGSGKTTVLNHLLAGRGGTRIGVVVNDFGSIEVDAMSVAGQVGDSMVSLGGGCLCCAVDGSELDAYLEKLSTPVHRIDVIVIEASGLAEPQEMIRMLMASENPDIRYGGMVEVVDAAEFDATRARHPETDRHLAVADLVVLNKTDRVDAAERARIEKELAALCAPGTPVVGADHGRIDPELLFDRRPWTETRGQLSFEDLLSEAAGHGQGHDHDGCDHVHAAYESTEFTSEQALSPRRFIDFLDRRPAGLYRIKGFVYFGVPGHEERYEVHAVGRFLRFAPRPWGRGEARLTQLVLIGAGTDGPGLLRDLEACREPAPHEARPESMWGVLRYVARPAEPAEGADSGTGSHEG

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Crispr_ID: NZ_CP020039_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020039_18

6859886-6859981

Orphan

Consensus_repeat	Method
GGGCGAACCGGTGGGGCCGGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020039_18

>merge|NZ_CP020039|18|6859886-6859981|CRISPRCasFinder
GGGCGAACCGGTGGGGCCGGGGGCGCCACGCCTCCGGGCGGACCGGTGGGGCCGCGGGGCCGTCAGGCCTCCGGGGCGAACCGGTGGGGCCGGGGG

>NZ_CP020039|18|16|6859886-6859981|CRISPRCasFinder
GGGCGAACCGGTGGGGCCGGGGG	CGCCACGCCTCCGGGCGGACCGGTGGGGCCGCGGGGCCGTCAGGCCTCCG
GGGCGAACCGGTGGGGCCGGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020039.1\|WP_079406704.1\|6859259_6859853_-\|1,4-alpha-glucan-branching-protein	unknown	unknown	gnl\|CDD\|380110
NZ_CP020039.1\|WP_079406698.1\|6849000_6850200_-\|saccharopine-dehydrogenase	unknown	unknown	gnl\|CDD\|225807
NZ_CP020039.1\|WP_079406708.1\|6866933_6867797_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079406703.1\|6857021_6859193_+\|3-hydroxyacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236864
NZ_CP020039.1\|WP_079406706.1\|6860795_6862637_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341233
NZ_CP020039.1\|WP_079406697.1\|6848313_6848991_+\|endonuclease-V	unknown	unknown	gnl\|CDD\|377374
NZ_CP020039.1\|WP_053168947.1\|6847987_6848287_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367663
NZ_CP020039.1\|WP_079406702.1\|6854536_6855679_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173849
NZ_CP020039.1\|WP_053701486.1\|6872381_6873182_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP020039.1\|WP_079406711.1\|6871159_6872335_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079406705.1\|6859984_6860710_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197716
NZ_CP020039.1\|WP_079408117.1\|6864804_6866361_-\|M1-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341066
NZ_CP020039.1\|WP_079406701.1\|6853501_6854527_+\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274647
NZ_CP020039.1\|WP_079406709.1\|6867891_6870378_+\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
NZ_CP020039.1\|WP_030385188.1\|6855755_6856970_+\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|236197
NZ_CP020039.1\|WP_079406700.1\|6852344_6853502_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|224717
NZ_CP020039.1\|WP_079406712.1\|6873276_6874914_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP020039.1\|WP_079408116.1\|6862702_6863692_-\|sphingomyelin-phosphodiesterase	unknown	unknown	gnl\|CDD\|132436
NZ_CP020039.1\|WP_079406699.1\|6850393_6852076_-\|PKD-domain-containing-protein	unknown	unknown	unknown
NZ_CP020039.1\|WP_079406707.1\|6863822_6864719_+\|DUF2236-domain-containing-protein	unknown	unknown	gnl\|CDD\|378343

Protein	Function_ID	Function_description	E-value
NZ_CP020039.1\|WP_079406704.1\|6859259_6859853_-\|1,4-alpha-glucan-branching-protein	gnl\|CDD\|380110	pfam18085, Mak_N_cap, Maltokinase N-terminal cap domain. Glycogen is a central energy storage molecule in bacteria and the metabolic pathways associated with its biosynthesis and degradation are crucial for maintaining cellular energy homeostasis. In mycobacteria, the GlgE pathway involves the combined action of trehalose synthase (TreS), maltokinase (Mak) and maltosyltransferase (GlgE). The N-terminal lobe can be divided into two subdomains: a cap N-terminal subdomain comprising the first 88 amino acid residues. This entry is for the cap N-terminal domain found in mycobacterial maltokinase (Mak), (EC:2.7.1.175). The N-terminal cap subdomain and the C-terminal lobe are predominantly acidic, the intermediate subdomain is enriched in positively charged residues. A structural search with only the first 88 amino acid residues of Mak, corresponding to the N-terminal cap subdomain of maltokinases, unveiled a resemblance with proteins displaying the cystatin fold and a remote similarity with the N-terminal domain of the serine/threonine protein kinase GCN2. Conservation of the cap subdomain in maltokinases (including the bifunctional TreS-Mak enzymes), in particular of the residues in the proximity of the P-loop, together with the potential flexibility of this region, are compatible with regulatory functions for this subdomain. Hence it is hypothesized that the N-terminal cap subdomain plays a central role in modulation of Mak enzymatic activity.	4.47073e-34
NZ_CP020039.1\|WP_079406698.1\|6849000_6850200_-\|saccharopine-dehydrogenase	gnl\|CDD\|225807	COG3268, COG3268, Uncharacterized conserved protein [Function unknown].	6.64462e-58
NZ_CP020039.1\|WP_079406703.1\|6857021_6859193_+\|3-hydroxyacyl-CoA-dehydrogenase	gnl\|CDD\|236864	PRK11154, fadJ, fatty acid oxidation complex subunit alpha FadJ.	1.82594e-159
NZ_CP020039.1\|WP_079406706.1\|6860795_6862637_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341233	cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases. This family includes long-chain fatty acid (C12-C20) CoA synthetases and Bubblegum-like very long-chain (>C20) fatty acid CoA synthetases. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Drosophila melanogaster mutant bubblegum (BGM) have elevated levels of very-long-chain fatty acids (VLCFA) caused by a defective gene later named bubblegum. The human homolog (hsBG) of bubblegum has been characterized as a very long chain fatty acid CoA synthetase that functions specifically in the brain; hsBG may play a central role in brain VLCFA metabolism and myelinogenesis. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	4.48669e-179
NZ_CP020039.1\|WP_079406697.1\|6848313_6848991_+\|endonuclease-V	gnl\|CDD\|377374	pfam04493, Endonuclease_5, Endonuclease V. Endonuclease V is specific for single-stranded DNA or for duplex DNA that contains uracil or that is damaged by a variety of agents.	6.96943e-100
NZ_CP020039.1\|WP_053168947.1\|6847987_6848287_-\|hypothetical-protein	gnl\|CDD\|367663	pfam03795, YCII, YCII-related domain. The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. A strongly conserved histidine and a aspartate suggest that the domain has an enzymatic function. This family also now includes the family formerly known as the DGPF domain (COG3795). Although its function is unknown it is found fused to a sigma-70 factor family domain in CC_1329. Suggesting that this domain plays a role in transcription initiation (Bateman A per. obs.). This domain is named after the most conserved motif in the alignment.	3.74039e-17
NZ_CP020039.1\|WP_079406702.1\|6854536_6855679_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173849	cd01160, LCAD, Long chain acyl-CoA dehydrogenase. LCAD is an acyl-CoA dehydrogenases (ACAD), which is found in the mitochondria of eukaryotes and in some prokaryotes. It catalyzes the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of LCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. LCAD acts as a homodimer.	0
NZ_CP020039.1\|WP_053701486.1\|6872381_6873182_+\|SDR-family-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	1.85627e-81
NZ_CP020039.1\|WP_079406705.1\|6859984_6860710_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|197716	smart00422, HTH_MERR, helix_turn_helix, mercury resistance.	5.40996e-19
NZ_CP020039.1\|WP_079408117.1\|6864804_6866361_-\|M1-family-metallopeptidase	gnl\|CDD\|341066	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain. This family contains mostly bacterial and some archaeal M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.	1.72886e-156
NZ_CP020039.1\|WP_079406701.1\|6853501_6854527_+\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274647	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family. Members of this protein family are predicted to be oxidoreductases dependent on coenzyme F420. The family includes a single member in Mycobacterium tuberculosis (Rv3520c/MT3621) but four in Mycobacterium smegmatis. Prediction that this family is F420-dependent is based primarily on Partial Phylogenetic Profiling vs. F420 biosynthesis. [Unknown function, Enzymes of unknown specificity].	1.49519e-173
NZ_CP020039.1\|WP_079406709.1\|6867891_6870378_+\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NZ_CP020039.1\|WP_030385188.1\|6855755_6856970_+\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|236197	PRK08242, PRK08242, acetyl-CoA C-acetyltransferase.	0
NZ_CP020039.1\|WP_079406700.1\|6852344_6853502_+\|CoA-transferase	gnl\|CDD\|224717	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion].	5.49502e-109
NZ_CP020039.1\|WP_079406712.1\|6873276_6874914_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	5.7825e-141
NZ_CP020039.1\|WP_079408116.1\|6862702_6863692_-\|sphingomyelin-phosphodiesterase	gnl\|CDD\|132436	TIGR03395, Sphingomyelinase_C, sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins. [Cellular processes, Pathogenesis].	8.51686e-112
NZ_CP020039.1\|WP_079406707.1\|6863822_6864719_+\|DUF2236-domain-containing-protein	gnl\|CDD\|378343	pfam09995, DUF2236, Uncharacterized protein conserved in bacteria (DUF2236). This domain, found in various hypothetical bacterial proteins, has no known function. This family contains a highly conserved arginine and histidine that may be active site residues for an as yet unknown catalytic activity.	7.0977e-51

>NZ_CP020039.1|WP_079406704.1|6859259_6859853_-|1,4-alpha-glucan-branching-protein
MAIIHKTTMSPGKLELLAAWLPAQPWYLPTGRPPALARAGGFRLDDPEGEVGIEFMVVTDTSGEEPTAYHVPLTYRGAPLAGAEAALVGTTEHGVLGRRWVYDGPHDPVLAAQLLALFQGRAEPQAQSLSDTPDPTVTARYDGPDPAVTRAGADALTVTRVLGDAAPATGSLGEVTAGWTGPDGTAHRGVFASLAAR
>NZ_CP020039.1|WP_079406703.1|6857021_6859193_+|3-hydroxyacyl-CoA-dehydrogenase
MSESTTIRWEQDETGVVTLILDDPNQSANTMNQAFKDSIAAVADRAEAEKDSIRGIIFTSAKKTFFAGGDLKDMIRLRPADAQIAFDTGTEIKRSLRRIETLGKPVVAAINGAALGGGYEICLASHHRVALDAPGSKIGLPEVTLGLLPAGGGVTRTVRLMGIADALLKVLLQGTQYTPQRALDNGLVHELAATPEEMLAKARAFIDANPESKQPWDVPGYRIPGGTPSNPKFAANLPAFPANLKKQLNGAPYPAPRNILACAVEGSQVDFETALTIEARYFTELVTGQTAKNMIQAFFFDLQAVNAGRSRPQGIAPRTVRKVAVLGAGMMGAGIAYSCARAGIEVVLKDVTPEAAAKGKAYSEKLLDKALSRGRTTEAKRAELLARITPTAEAADLAGCDAVIEAVFEDTALKHKVFQEIQDVIEPDALLCSNTSTLPITGLAEGVSRPADFIGLHFFSPVDKMPLVEIIKGEHTGDEAIARAFDLVRRINKTPIVVNDSRGFFTSRVIGQFINEGVAMVGEGVEPASIEQAAAQAGYPAKVLSLMDELTLTLPRKIRNETRKAFEAEGRAWTEHPADAVIDRMVDEFGRPGRSGGAGFYAYDEAGKRAGIWPGLREHFAKPGYEIPFEDMKERMLFSEALDTVRCLDEGVLTSIADANIGSIMGIGFPAWTGGVIQYINGYEGGPAGFVARARELAEKYGERFTPPASLVAKAERGETYAD
>NZ_CP020039.1|WP_030385188.1|6855755_6856970_+|acetyl-CoA-C-acetyltransferase
MSTEAYVYDAIRTPRGRGKANGALHGTKPIDLVVGLIDALRERNPGLDPATIDDIVLGVVGPVGDQGSDIARIAAIAAGLPDTVAGVQENRFCASGLEAVNMAAAKVRSGWEDLVLAGGVESMSRVPMASDGGAWFADPMTNWDTGFVPQGIGADLIATIEGFSRRDVDEYAALSQERAAAAIKDGRFAKSVVPVTDRNGLIVLDHDEFVRPGTTADTLAKLKPSFADIGELGGFDAVALQKYHWVEKIDHVHHAGNSSGIVDGASLVAIGSREAGERGGLTPRARIVSAAVSGSEPTIMLTGPAPATRKALAKAGLTIDDIDLVEINEAFAGVVLRFVKDMGLSLDKVNVNGGAIALGHPLGATGAMILGTIVDELERQDKRYGLVTLCVGGGMGVATIVERL
>NZ_CP020039.1|WP_079406702.1|6854536_6855679_+|acyl-CoA-dehydrogenase
MQRRIFDADHEAFRETVRTFLAKEVLPHYEQWEKDGIVSRDAWRAAGRQGLLGLAVPEEYGGGGNTDFRYAAVIAEEFTRAGAPGLAIGLHNDIIGPYLTSLATEEQKRRWLPGFCSGQTITAIAMTEPGAGSDLQGIRTTAEDRGDHWVLGGSKTFISNGILADLVIVVAKTTPEGGAHGLSLLVVERGAEGFERGRNLDKIGQKSQDTAELFFNDVRVPKENLLGELNGAFVHLMTNLAQERMGIAMAGIAAAEHLLEITTQYVKEREAFGRPLAKLQHIRFEIAEMATEVAVTRTFLDRCITDHANGELDHVHASMAKWWATELQKRVADRCLQLHGGYGYMSEYRVARAFTDGRIQTIYGGTTEIMKEIIGRSLLG
>NZ_CP020039.1|WP_079406701.1|6853501_6854527_+|LLM-class-F420-dependent-oxidoreductase
MELSMMLDYAGDPRRAADQAAALESAGLDAVWVAEAWGFDSPTIMGYLAARTERLKIGSAILNVYSRTPGLIAQTAAGLDALSGGRALLGLGASGPQVIEGWHGMPYDKPLGRTRETVELCRRIWRRETIDHHGITDMPLPPERGSGLGKPLKILTRPVRPAVPVYIASLGPANVRMTAEIADGWLPTLFIPEKAAAVWGGPLAEGTAKRSPELGPLRTVAGGLLAIGDDAAAVRDLARPQIALYVGGMGAVGKNFYNDLAVAYGYGEEARRIQELYLSGRKRDAAAAVPDEFCELMTLCGPEGYVRERIEAFREAGVTMLNVTPVGPDPARLIETVKNWL
>NZ_CP020039.1|WP_079406700.1|6852344_6853502_+|CoA-transferase
MAVTGNGNREASGPGPLAGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGGGLAVDPAYDITNRNKRSVLVDLKSADGPARVLDLVERADVLLEGFRPGVAERLRVGPAECHARNPKLVYGRMTGWGQEGPLAETAGHDIAYIAVTGALGMIGNPGEPPAVPANLVGDYAGGSLYLVIGVLAALHHARATGTGQVVDAAIVDGTAHLTAMIHGMMAAGGWQDRRGANLLDGGCPFYGTYETSDGQYMAVGALEQQFYDTFVELLGIKGRAPARKDLARWGELREAVAARFKTRTRAQWTAVFEGSDACVAPVLSLREAPDHPHLAARGTFTDFGGIVQPAPAPRFSATPGAVTGGPAQPGAHAASVAADWDVPALLGKEEEN
>NZ_CP020039.1|WP_079406699.1|6850393_6852076_-|PKD-domain-containing-protein
MRNRRLVVSVAAIAAGVGLIPGVAQADPAKPDARRAATPDVDLGKAAASQAKGHTFTSPADRTVRTALPSARTGKAGAPQAQSAAADNPDLAVGLSGYGLTAHGIELKSTLTSTSTPLEVTIAWGDGKTDVVNASGAGVLTNKHTYAEVGAYTVKVTVKDTANSLSAVNELAVVTRGSDFTPYTPTRLLDTRFGTGVTQGKVGAGKSTRVKVGGNGKIPAGVTAVALNITVTNALDSGFITAFPEGVERPFTSNVNFKAGQTVPNMVIVPVGKSGYVELYNGSWKSVDLIADVTGYFTHTASSGYTPVEPTRFVDTREGLGTTKRKLAAQSAFSTQISGLRGVPQGISAVALNVTITNPQGAGHLTVYPSGGALPATSNLNFNANQTIANSVIVPVSADGKISAFNGAWAPTDVVVDVVGYYSEGSDSAFLPLSPERVFDTREPEDPFYGTVWGETYVPLPISDADPSVTGWVMNSTVANTQGNGYLTVTPDPNSWDDYINESAFWPTPPNSSNLNWTKGDVVPNLVQASSGNHGIIDFWNRGWEDIDLIVDVFGLYQKG
>NZ_CP020039.1|WP_079406698.1|6849000_6850200_-|saccharopine-dehydrogenase
MNATVPHDRPERAYDVVLFGATGFVGALTAEYLAAHAPAGCRWALAGRDTAKLERLRERLSLIDPACAELPLLRADAQDPAAVRELAASTRVLATTVGPYIWYGAELVAACAEAGTDYVDLTGEPEFVDRMYVEHDARARETGARIVHACGFDSVPADLGAYFTVRQLPQGVPLTVDGFIRSNALFSGGTLASALTALSRGPQTAAAARARRLHEPRLLGRRARGPVGVPRFSRETGTWAMPLPTLDPRIVARSAAALERYGPDFRYRHYASVKHLPVAVGGTAALGATVALAQVPPARRWLMDRWEPGRGPDAERRARSWFTARFVGEGGGRRVLTEVSGGDPGYGETAKMLAESALCLAHDALPAVSGQLTTAVAMGDALTARLQKAGITFRVADAR
>NZ_CP020039.1|WP_079406697.1|6848313_6848991_+|endonuclease-V
MTSVKTPADEAEARAIQDELRHQVVLTEPGPPPGHGLVTGVDVAYDDARDLVAAAAVVLDAATLEVVEEATAVGHVSFPYVPGLLAFRELPTVLAALDSLKSAPGLVVCDGYGLAHPRGFGLACHLGVVTGLPAIGVAKNPFTFTHEEPGARRGDAAALLAADGAEVGRALRTQDGIKPVYVSVGHRVSLDNACAHVLALSPRFRIPETTRHADSLCRRALREAS
>NZ_CP020039.1|WP_053168947.1|6847987_6848287_-|hypothetical-protein
MFVMELTYTVPVEAVEEHMDAHIAWLDGYYAAGVFLASGRKVPRDGGVILAGGVSRAEIERIAAEDPFAVAGVCAYTVTEFIATKTSADLSTVRENPVV
>NZ_CP020039.1|WP_079406705.1|6859984_6860710_-|MerR-family-transcriptional-regulator
MADQAPEPMLTVDELAARAGVTVRTVRFYSTRGLLPPPVIGPRRVGHYGPEHLSRLALIEELQHQGMTLSAIERYLDALPDDLSAHDLAIHRAMVASWAPDAAQEVTREELEKRAGRSLSDADVRRLTAMNVLAVSGDGFRVDVGLLRLGVALLDVPIAHETILAARRVLMEHTRSAAHELTALFRDEVWGPFTEGESDPERVESMKALSAHMQPMVVQALVTAFQRSLKEELKAAFAPEA
>NZ_CP020039.1|WP_079406706.1|6860795_6862637_+|long-chain-fatty-acid--CoA-ligase
MTTNLRLPGRPEEITLPALLARNAAAYGELPALSWRAGPEAADWTTLTWGEVRRKVAVLAAGYAALGIERGEHVLMMMGNRPEHWLSDLALVHLGAVPVTVYGTSAPEQIAHIARHSRARVAVVEGARELLRWEPLLADAGVPLERLVVAEAAEAGGHSTYASLYSGGARLHRGDAFEKAWQETRPEDPLTVVYTSGTTGDPKGVRLTHRNIVLQAVRLDRHVELPEHAEHICYLPFAHIAERVLGIYLPLLRASHVRLCADPTAVSGAVRELHPVQFFGVPRVWEKLAASVRAVLAQLPEAQRTAIEAANDLARARAGHRERGEEVPAALEASYAEAKEQVLDPLLRLAGLDRLMWTASATAPMPIDVVRFWAGWGITIMDAWGLTETSGVCTVNSPDGFRLGSVGRAIEGLELRLAEDGEILTRGATVFGGYLRPDGSLESACDEEGWFPTGDIGRLDEDGYLWLTDRKKELIITSNGKNVSPALVENTVKEHPLIGQALVHGDGRSYLVALLVLDPELAPVWAAARGIEAASPTALAAHPAVREEIARAVEAANARLNRTEQIKRYRLLTEEWGPETGELTPSLKLRRRVVRDKYGALIDGLYEEPYGTA
>NZ_CP020039.1|WP_079408116.1|6862702_6863692_-|sphingomyelin-phosphodiesterase
MLLSTPRSRRAAATAVAAVAAGALAATTAPAATAAETAAAPRLSVLSYNVFLMSKNLYPNWGQDHRAAEIPRASFYQGHDVVVLQEAFDNSSSDALKANSAAQYPYQTPVVGRSKSGWDATGGAYSSTTPEDGGVTVLSKWPIVRKEQVVYKDACGADWWSNKGFAYVVLNVNGAKVHVVGTHAQSTDPGCGAGEAAEMRARQFRAVDAFLDGKNIPANEQVIVAGDLNVDSRTPEYASLLANADLAGSDSRTGHPYSFDTALNSIANYRYPTDPREDLDYVLYRKGNARPAGWENNVVKEQSAPWTVSSWGTSYTYNNLSDHYPLIGR
>NZ_CP020039.1|WP_079406707.1|6863822_6864719_+|DUF2236-domain-containing-protein
MTTTDSAHPAGPAATRRTDPAPPPPGGVLWTIAGDVRALLMLPAAFTMQVAHPAIAAGVDEYSVFRTDPWGRGERSLRSVQLWVYGGEEAAQEGRRVRRLHKDIQGTDTRGRRYHSLDPACYAWVHATGFPVYLYAGRYLLRRFTPAQERQLYREWLQVGRILGLHDRDMPQTIEEYWTYWGRMLAEEIEPTAVARELVATDVPLPRPQAASPAVRLLLRLTWPVLRAAFLRLRAFVTAGYMPPEARAAIGLEWSPAQERRLRRFSTAVRLLVPLLPERLRYLPIAYRARAAWHAGAH
>NZ_CP020039.1|WP_079408117.1|6864804_6866361_-|M1-family-metallopeptidase
MHRKVIAPSVLAASLLLVIPASAASAGPGAPGVGDPYYPASGNGGYDVSHYDLRLQYQPKTDLLEGTATLLATAKQDLSRFNLDFGLQVSEIRVNGVKAKFATSGSHELEVTPAKPLARNTPLSVVVKYAGKPSELKVDGWTAWQRTPDGGVAAQEPDSAVWWFPSNDHPLDKATFDVSINVPDGTQAISNGVLQSQTSRLGWTRYNWRSNKPQATYLATLAVGKFDITTDRTASGLPILNAYSKDLGDNAGAARASVERTGEVAEWLEGVFGPYPFNALGGYVPNVTAGFALETQTRPFYGPGQFRGGANVSVVVHELAHQWYGDSVSVDGWKDIWINEGFARYSQWLWSEKEGEGTAQELADWAYALRPAEDAFWQVKPGDPGPENQFHGAVYDRGAIALQALRNEIGDEKFFEILKGWPTERAYGNAKVGDFVRYAEKVSKKPLAQLFETWLYTPGKPEASALNPSAAGPSARSLQQSAPAKPAKPAAEPKSWKKIAETNTIHDTEHGSGSGHRH
>NZ_CP020039.1|WP_079406708.1|6866933_6867797_+|hypothetical-protein
MTLPLLAARRCWHAAINPLHATIYFSPDLAKELAALGVTDPVAVNLASRAAAMGAVGPGTMTATFYNYRHDLLARHLPAVWDTATPEQVLAARLRAADSTLRRLLGPETVESPEMAEAADLAMRATEGCTRHARTLYAAHADLPVPEAPHLRLWHATTLLREHRGDGHLAALLLAALDPVEALVSHTATGRGMTAKWIKAIRGWEQSDLDAATGRLRERGILDADGELTEEGKAVRERLEAETDRLDVAPYEHLGEQGLARLAELGGGFVTKAIGAGAFPRDLFGRA
>NZ_CP020039.1|WP_079406709.1|6867891_6870378_+|RNA-binding-transcriptional-accessory-protein
MTTSIECRIAEELGVRERQVKAAVELLDGGSTVPFIARYRKEATEMLDDAQLRTLEERLRYLRELEDRRAAVLDSVREQGKLTDELAARIAAADTKARLEDIYLPFKPKRRTKAQIAREAGLEPLAEGLLADPSVEPAAAAAAFVDADKGVADPAAALEGARAILTERFGEDADLIGELRERMWGRGRLAAKVREGKEEAGAKFADYFDFAEPFTALPSHRVLAMLRGEKEDVLDLTLEPEEPSEEPGPSTYEGMIARRFGVGDRGRPGDKWLGDTVRWAWRTKIQVHLGIDLRMRLRQAAEDEAVRVFASNLRDLLLAAPAGTRATLGLDPGFRTGVKVAVVDATGKVVATDVIYPHVPANKWDESLAKLARLAKEHSVELVAIGNGTASRETDKLAGDLITRHPELGLTKVMVSEAGASVYSASAFASQELPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDLSEVKLSRSLDAVVEDCVNGVGVDVNTASAPLLSRVSGISGGLAENIVAHRDANGPFRSRKGLKDVARLGPKAYEQCAGFLRIRGGDDPLDFSSVHPEAYPVVRGMAKTAGSEVAALIGNGDVLRSLRPEQFVTEAFGLPTVTDILRELEKPGRDPRPAFRTATFKEGVEKIGDLAPGMILEGVVTNVAAFGAFIDIGVHQDGLAHVSALSKNFVKDPRDVVKPGDIVRVKVMDVDIPRKRISLTLRLEDEAGAERGAGAPRQREDRRGGGNGGNGAGNGRPPQQRGGAGGREGGAREGGRNQGRGQGQGERGQGGQGRRQGGGGGSAPAPANSAMADALRRAGLTSAPEERRKR
>NZ_CP020039.1|WP_079406711.1|6871159_6872335_+|hypothetical-protein
MAADLTAFGNWLALPSVVCLWAAVLLRAPGALRSPQQRGLWLAVATAAAAMTLNLPEVVAYAMDRGPGYAHTIGLVRNLIGVLSAGAVLYFVAATTRGRRLQLAACTATAAWLGALLALDAAAPGHGTHTMPPVGDPVPSLAYWLVLISAHVVANTVCVALCWRYSRRTASRGLAAGLRLFGLGTALAGLFWLAYLLKALFGSTWAMPALPLLMNLHGLLRAVAILVPTLFTLRRTFADLATAWRLWPLWRDLVEAVPHVALNKPRACRVMELLWPPVPRNLLVYRKVIETRDAILILGEYAAPGALDRARGQVAGHGIPEQRATAAALARVLREARQAKLDGAPGQPGEGAALELPAAIHTSQEDGDLADEARFLVDVAQAYASPVPPRK
>NZ_CP020039.1|WP_053701486.1|6872381_6873182_+|SDR-family-oxidoreductase
MTAANAAATTVLITGASAGLGAAFARGFAAKGCDLVLVARDKDRLDAVAAELAREYGTASEVLPADLLDPADCAAVAARLADPARPVDILVNNAGFGLPAPFPYSPVEDEERMLDLLVKVPLRLTHALLPGLRARRRGAVLNVSSVAGLLPTGTYGAAKAWITAFSESLRVDMAPYGVRVLAVVPGFTRTEFQARAGMDVSALRDAVWLEPEAVVAQALKDLALRRPVSITGRRYRAYALAARHLPRTFVARKMARKRRPPAGADM
>NZ_CP020039.1|WP_079406712.1|6873276_6874914_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MTATLVAKKLTAAHGERTLFADLDLVVAPGDVIGLVGVNGAGKSTLLRLLAGLDTPETGELRLSPPGAAVGHLPQEPERRPQESVREFLARRTGVAAAQAELDAATQGLVDGTPGADDAYATALDQWLNLGGADLDERAQEVADDLGLAVGLDLPMTALSGGQAARAGLASLLLSRYDVFLLDEPTNDLDLDGLERLERFVKGLRAGTVVISHDREFLTRTVTKVLELDLAQQQINLYGGGYDAYLEERERSRDHAREEFEEYADKKAALEGRAQMQRNWMDKGVRNARRKATDNNKLGKNLRAESSEKQAAKARQTQRAIERLDVVDEPRKEWELRMEIAAAPRSGSVVATLREAAVKRGDFSFGPASLQIDWADRVAITGANGAGKSTLLAVLLGRLAPDSGSATLGSGVLVGEVDQARGLFLGDEPLLDAFCAAVPDTEPAEVRTLLAKFGLKAAHVLRPAATLSPGERTRAALALLQGRGVNLLVLDEPTNHLDLPAIEQLEAALDAYEGTLLLVTHDRRMLDAVHVTRRLEVSGGKVTEL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP020039_6	6.1\|2133422\|53\|NZ_CP020039\|CRT	2133422-2133474	53	NZ_CP020039.1	2133254-2133306	0	1.0
NZ_CP020039_6	6.9\|2133830\|23\|NZ_CP020039\|CRT	2133830-2133852	23	NZ_CP020039.1	2134076-2134098	0	1.0
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	NZ_CP020039.1	4599107-4599134	0	1.0
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	NZ_CP020039.1	3833079-3833106	0	1.0
NZ_CP020039_6	6.2\|2133494\|20\|NZ_CP020039\|CRT	2133494-2133513	20	NZ_CP020039.1	2134214-2134233	1	0.95
NZ_CP020039_6	6.4\|2133587\|23\|NZ_CP020039\|CRT	2133587-2133609	23	NZ_CP020039.1	2134076-2134098	1	0.957
NZ_CP020039_6	6.5\|2133629\|20\|NZ_CP020039\|CRT	2133629-2133648	20	NZ_CP020039.1	2133326-2133345	1	0.95
NZ_CP020039_6	6.5\|2133629\|20\|NZ_CP020039\|CRT	2133629-2133648	20	NZ_CP020039.1	2133983-2134002	1	0.95
NZ_CP020039_6	6.7\|2133740\|20\|NZ_CP020039\|CRT	2133740-2133759	20	NZ_CP020039.1	2134214-2134233	1	0.95
NZ_CP020039_6	6.10\|2133872\|20\|NZ_CP020039\|CRT	2133872-2133891	20	NZ_CP020039.1	2133326-2133345	1	0.95
NZ_CP020039_6	6.10\|2133872\|20\|NZ_CP020039\|CRT	2133872-2133891	20	NZ_CP020039.1	2133983-2134002	1	0.95
NZ_CP020039_6	6.2\|2133494\|20\|NZ_CP020039\|CRT	2133494-2133513	20	NZ_CP020039.1	2133287-2133306	2	0.9
NZ_CP020039_6	6.4\|2133587\|23\|NZ_CP020039\|CRT	2133587-2133609	23	NZ_CP020039.1	2133323-2133345	2	0.913
NZ_CP020039_6	6.4\|2133587\|23\|NZ_CP020039\|CRT	2133587-2133609	23	NZ_CP020039.1	2133980-2134002	2	0.913
NZ_CP020039_6	6.5\|2133629\|20\|NZ_CP020039\|CRT	2133629-2133648	20	NZ_CP020039.1	4719749-4719768	2	0.9
NZ_CP020039_6	6.6\|2133668\|53\|NZ_CP020039\|CRT	2133668-2133720	53	NZ_CP020039.1	2133254-2133306	2	0.962
NZ_CP020039_6	6.7\|2133740\|20\|NZ_CP020039\|CRT	2133740-2133759	20	NZ_CP020039.1	2133287-2133306	2	0.9
NZ_CP020039_6	6.9\|2133830\|23\|NZ_CP020039\|CRT	2133830-2133852	23	NZ_CP020039.1	2133323-2133345	2	0.913
NZ_CP020039_6	6.9\|2133830\|23\|NZ_CP020039\|CRT	2133830-2133852	23	NZ_CP020039.1	2133980-2134002	2	0.913
NZ_CP020039_6	6.10\|2133872\|20\|NZ_CP020039\|CRT	2133872-2133891	20	NZ_CP020039.1	4719749-4719768	2	0.9

1. spacer 6.1|2133422|53|NZ_CP020039|CRT matches to position: 2133254-2133306, mismatch: 0, identity: 1.0

cgccgcggaacccaccacggtcgtcatcacgacgcgggtacgaaggacggtcc	CRISPR spacer
cgccgcggaacccaccacggtcgtcatcacgacgcgggtacgaaggacggtcc	Protospacer
*****************************************************

2. spacer 6.9|2133830|23|NZ_CP020039|CRT matches to position: 2134076-2134098, mismatch: 0, identity: 1.0

ggcgcgggtacgaaggacggtcg	CRISPR spacer
ggcgcgggtacgaaggacggtcg	Protospacer
***********************

3. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to position: 4599107-4599134, mismatch: 0, identity: 1.0

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
gaccgccgagccgcccgcagggcaaccc	Protospacer
****************************

4. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to position: 3833079-3833106, mismatch: 0, identity: 1.0

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
gaccgccgagccgcccgcagggcaaccc	Protospacer
****************************

5. spacer 6.2|2133494|20|NZ_CP020039|CRT matches to position: 2134214-2134233, mismatch: 1, identity: 0.95

gcgggtaggacggacggtcc	CRISPR spacer
gcgggtaggacgggcggtcc	Protospacer
*************.******

6. spacer 6.4|2133587|23|NZ_CP020039|CRT matches to position: 2134076-2134098, mismatch: 1, identity: 0.957

ggcgcgggtacgagggacggtcg	CRISPR spacer
ggcgcgggtacgaaggacggtcg	Protospacer
*************.*********

7. spacer 6.5|2133629|20|NZ_CP020039|CRT matches to position: 2133326-2133345, mismatch: 1, identity: 0.95

gcgggtaggacgggcggtcg	CRISPR spacer
gcgggtaggacggacggtcg	Protospacer
*************.******

8. spacer 6.5|2133629|20|NZ_CP020039|CRT matches to position: 2133983-2134002, mismatch: 1, identity: 0.95

gcgggtaggacgggcggtcg	CRISPR spacer
gcgggtaggacggacggtcg	Protospacer
*************.******

9. spacer 6.7|2133740|20|NZ_CP020039|CRT matches to position: 2134214-2134233, mismatch: 1, identity: 0.95

gcgggtaggacggacggtcc	CRISPR spacer
gcgggtaggacgggcggtcc	Protospacer
*************.******

10. spacer 6.10|2133872|20|NZ_CP020039|CRT matches to position: 2133326-2133345, mismatch: 1, identity: 0.95

gcgggtaggacgggcggtcg	CRISPR spacer
gcgggtaggacggacggtcg	Protospacer
*************.******

11. spacer 6.10|2133872|20|NZ_CP020039|CRT matches to position: 2133983-2134002, mismatch: 1, identity: 0.95

gcgggtaggacgggcggtcg	CRISPR spacer
gcgggtaggacggacggtcg	Protospacer
*************.******

12. spacer 6.2|2133494|20|NZ_CP020039|CRT matches to position: 2133287-2133306, mismatch: 2, identity: 0.9

gcgggtaggacggacggtcc	CRISPR spacer
gcgggtacgaaggacggtcc	Protospacer
******* ** *********

13. spacer 6.4|2133587|23|NZ_CP020039|CRT matches to position: 2133323-2133345, mismatch: 2, identity: 0.913

ggcgcgggtacgagggacggtcg	CRISPR spacer
ggcgcgggtaggacggacggtcg	Protospacer
********** ** *********

14. spacer 6.4|2133587|23|NZ_CP020039|CRT matches to position: 2133980-2134002, mismatch: 2, identity: 0.913

ggcgcgggtacgagggacggtcg	CRISPR spacer
ggcgcgggtaggacggacggtcg	Protospacer
********** ** *********

15. spacer 6.5|2133629|20|NZ_CP020039|CRT matches to position: 4719749-4719768, mismatch: 2, identity: 0.9

gcgggtaggacgggcggtcg	CRISPR spacer
gcgggtacgccgggcggtcg	Protospacer
******* * **********

16. spacer 6.6|2133668|53|NZ_CP020039|CRT matches to position: 2133254-2133306, mismatch: 2, identity: 0.962

cgccgcggaacccaccgcggtcgtcatcgcgacgcgggtacgaaggacggtcc	CRISPR spacer
cgccgcggaacccaccacggtcgtcatcacgacgcgggtacgaaggacggtcc	Protospacer
****************.***********.************************

17. spacer 6.7|2133740|20|NZ_CP020039|CRT matches to position: 2133287-2133306, mismatch: 2, identity: 0.9

gcgggtaggacggacggtcc	CRISPR spacer
gcgggtacgaaggacggtcc	Protospacer
******* ** *********

18. spacer 6.9|2133830|23|NZ_CP020039|CRT matches to position: 2133323-2133345, mismatch: 2, identity: 0.913

ggcgcgggtacgaaggacggtcg	CRISPR spacer
ggcgcgggtaggacggacggtcg	Protospacer
********** ** *********

19. spacer 6.9|2133830|23|NZ_CP020039|CRT matches to position: 2133980-2134002, mismatch: 2, identity: 0.913

ggcgcgggtacgaaggacggtcg	CRISPR spacer
ggcgcgggtaggacggacggtcg	Protospacer
********** ** *********

20. spacer 6.10|2133872|20|NZ_CP020039|CRT matches to position: 4719749-4719768, mismatch: 2, identity: 0.9

gcgggtaggacgggcggtcg	CRISPR spacer
gcgggtacgccgggcggtcg	Protospacer
******* * **********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP020039_17	17.1\|6069964\|22\|NZ_CP020039\|CRISPRCasFinder	6069964-6069985	22	KX641266	Mycobacterium phage Terror, complete genome	8205-8226	1	0.955
NZ_CP020039_17	17.1\|6069964\|22\|NZ_CP020039\|CRISPRCasFinder	6069964-6069985	22	KX641265	Mycobacterium phage Taheera, complete genome	8205-8226	1	0.955
NZ_CP020039_6	6.4\|2133587\|23\|NZ_CP020039\|CRT	2133587-2133609	23	NZ_CP012918	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p4, complete sequence	23486-23508	2	0.913
NZ_CP020039_17	17.1\|6069964\|22\|NZ_CP020039\|CRISPRCasFinder	6069964-6069985	22	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	287022-287043	2	0.909
NZ_CP020039_17	17.1\|6069964\|22\|NZ_CP020039\|CRISPRCasFinder	6069964-6069985	22	NZ_CP028919	Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence	4276-4297	2	0.909
NZ_CP020039_17	17.1\|6069964\|22\|NZ_CP020039\|CRISPRCasFinder	6069964-6069985	22	MK801727	Gordonia phage ThankyouJordi, complete genome	9821-9842	2	0.909
NZ_CP020039_17	17.1\|6069964\|22\|NZ_CP020039\|CRISPRCasFinder	6069964-6069985	22	MH779505	Mycobacterium phage Grizzly, complete genome	8212-8233	2	0.909
NZ_CP020039_17	17.1\|6069964\|22\|NZ_CP020039\|CRISPRCasFinder	6069964-6069985	22	MK524494	Mycobacterium phage Rabbs, complete genome	8196-8217	2	0.909
NZ_CP020039_17	17.1\|6069964\|22\|NZ_CP020039\|CRISPRCasFinder	6069964-6069985	22	NC_031102	Mycobacterium phage Sneeze, complete genome	8195-8216	2	0.909
NZ_CP020039_17	17.1\|6069964\|22\|NZ_CP020039\|CRISPRCasFinder	6069964-6069985	22	MT723938	Gordonia phage Bunnybear, complete genome	9814-9835	2	0.909
NZ_CP020039_17	17.1\|6069964\|22\|NZ_CP020039\|CRISPRCasFinder	6069964-6069985	22	MK875793	Gordonia phage WelcomeAyanna, complete genome	9821-9842	2	0.909
NZ_CP020039_17	17.1\|6069964\|22\|NZ_CP020039\|CRISPRCasFinder	6069964-6069985	22	MN234185	Mycobacterium phage Lemuria, complete genome	104-125	2	0.909
NZ_CP020039_17	17.1\|6069964\|22\|NZ_CP020039\|CRISPRCasFinder	6069964-6069985	22	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	612499-612520	3	0.864
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	JX163858	Caulobacter phage phiCbK, complete genome	175418-175445	5	0.821
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	KY555147	Caulobacter phage Ccr34, complete genome	32411-32438	5	0.821
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	KY555145	Caulobacter phage Ccr29, complete genome	35055-35082	5	0.821
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	KY555143	Caulobacter phage Ccr2, complete genome	32888-32915	5	0.821
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	NC_019410	Caulobacter phage CcrKarma, complete genome	32492-32519	5	0.821
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	KY555146	Caulobacter phage Ccr32, complete genome	32412-32439	5	0.821
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	NC_019407	Caulobacter phage CcrMagneto, complete genome	31680-31707	5	0.821
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	KY555144	Caulobacter phage Ccr5, complete genome	32286-32313	5	0.821
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	KY555142	Caulobacter phage Ccr10, complete genome	32413-32440	5	0.821
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	NC_019411	Caulobacter phage CcrSwift, complete genome	31645-31672	5	0.821
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	60458-60485	6	0.786
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	589596-589627	7	0.781
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	410311-410342	7	0.781
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	106871-106902	7	0.781
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	71199-71230	7	0.781
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	542920-542951	7	0.781
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	542920-542951	7	0.781
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_LR134461	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 19, complete sequence	119913-119944	7	0.781
NZ_CP020039_12	12.3\|4363293\|38\|NZ_CP020039\|CRT	4363293-4363330	38	NZ_CP029835	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence	43569-43606	7	0.816
NZ_CP020039_12	12.3\|4363293\|38\|NZ_CP020039\|CRT	4363293-4363330	38	NC_016588	Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence	45560-45597	7	0.816
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	NZ_CP013381	Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence	235926-235957	7	0.781
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	NZ_CP009547	Burkholderia sp. 2002721687 plasmid pBTU, complete sequence	187045-187076	7	0.781
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	502242-502273	7	0.781
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	MF417923	Uncultured Caudovirales phage clone 7S_12, partial genome	14404-14435	7	0.781
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	MF417935	Uncultured Caudovirales phage clone 8F_1, partial genome	14279-14310	7	0.781
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	MF417934	Uncultured Caudovirales phage clone 8AX_6, partial genome	11770-11801	7	0.781
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	MF417919	Uncultured Caudovirales phage clone 3S_10, partial genome	14530-14561	7	0.781
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	MF417936	Uncultured Caudovirales phage clone 8S_5, partial genome	13311-13342	7	0.781
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	MF417922	Uncultured Caudovirales phage clone 7AX_5, partial genome	14553-14584	7	0.781
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	MF417924	Uncultured Caudovirales phage clone 9F_3, partial genome	14381-14412	7	0.781
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	MF417917	Uncultured Caudovirales phage clone 7F_10, partial genome	14957-14988	7	0.781
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	111172-111203	7	0.781
NZ_CP020039_15	15.1\|4938020\|28\|NZ_CP020039\|CRISPRCasFinder	4938020-4938047	28	NZ_CP027299	Streptomyces sp. SGAir0924 plasmid unnamed_5	66186-66213	7	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_022063	Mycobacterium phage Phelemich, complete genome	32181-32212	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	GU936714	Synechococcus phage S-CBS2, complete genome	40467-40498	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KF024727	Mycobacterium phage Reprobate, complete genome	32186-32217	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_041965	Mycobacterium phage Athena, complete genome	21532-21563	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1223691-1223722	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1243707-1243738	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1408867-1408898	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	658780-658811	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	2013067-2013098	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1483110-1483141	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1421054-1421085	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1488746-1488777	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	816980-817011	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1662300-1662331	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1227523-1227554	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1788228-1788259	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1407222-1407253	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1254302-1254333	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	486898-486929	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1927099-1927130	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1490560-1490591	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	979020-979051	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	1200217-1200248	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1415100-1415131	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1452216-1452247	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1411828-1411859	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1590632-1590663	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1626815-1626846	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1377315-1377346	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	577789-577820	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1502041-1502072	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1590599-1590630	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1467587-1467618	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1500432-1500463	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1589393-1589424	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1488746-1488777	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1401188-1401219	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1467587-1467618	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1500432-1500463	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1589429-1589460	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1467587-1467618	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1401210-1401241	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1466790-1466821	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1500432-1500463	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1500432-1500463	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1500432-1500463	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1589429-1589460	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	550723-550754	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1589418-1589449	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1401210-1401241	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1408159-1408190	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1388812-1388843	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1442068-1442099	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1480946-1480977	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1497747-1497778	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1589418-1589449	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1401210-1401241	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1467586-1467617	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1493656-1493687	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1590419-1590450	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1401210-1401241	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1401210-1401241	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1589429-1589460	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1500435-1500466	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1589440-1589471	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1589241-1589272	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN734437	Sphingomonas phage Eidolon, complete genome	19693-19724	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN234207	Gordonia phage Ranch, complete genome	3721-3752	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_023498	Mycobacterium phage Validus, complete genome	23544-23575	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	741896-741927	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5385325-5385356	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1446563-1446594	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	397666-397697	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	741748-741779	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	741727-741758	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1432111-1432142	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1394311-1394342	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	167732-167763	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP031116	Rubrobacter indicoceani strain SCSIO 08198 plasmid unnamed1, complete sequence	54235-54266	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_013857	Azospirillum sp. B510 plasmid pAB510c, complete sequence	184951-184982	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	528442-528473	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	25719-25750	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP026518	Deinococcus sp. NW-56 plasmid unnamed2, complete sequence	211258-211289	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	304030-304061	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1603944-1603975	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK279887	Mycobacterium phage Timmi, complete genome	20456-20487	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MG925339	Mycobacterium phage Chunky, complete genome	20748-20779	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	GU247134	Mycobacterium phage Scoot17C, complete genome	20742-20773	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	JF957056	Mycobacterium phage Thora, complete genome	20747-20778	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MT316463	Mycobacterium phage Slatt, complete genome	20756-20787	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KX576645	Mycobacterium phage Derpp, complete genome	20304-20335	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KX670813	Mycobacterium phage MitKao, complete genome	20447-20478	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MH576970	Mycobacterium phage DonSanchon, complete genome	20441-20472	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK279866	Mycobacterium phage MRabcd, complete genome	20440-20471	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MH513973	Mycobacterium phage Kwksand96, complete genome	20308-20339	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK524512	Mycobacterium phage Carthage, complete genome	19652-19683	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK279908	Mycobacterium phage Roliet, complete genome	20739-20770	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KY006474	Mycobacterium phage Prann, complete genome	20406-20437	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_027985	Mycobacterium phage UncleHowie, complete genome	20447-20478	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	JN698990	Mycobacterium phage IsaacEli, complete genome	20751-20782	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KY965066	Mycobacterium phage BlackStallion, complete genome	20747-20778	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN703415	Mycobacterium phage Mcshane, complete genome	20441-20472	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MH051251	Mycobacterium phage DuchessDung, complete genome	19595-19626	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KX576646	Mycobacterium phage TyrionL, complete genome	20304-20335	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK279871	Mycobacterium phage Plmatters, complete genome	20745-20776	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK279883	Mycobacterium phage Struggle, complete genome	20296-20327	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN096366	Mycobacterium phage AbsoluteMadLad, complete genome	20735-20766	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MH371107	Mycobacterium phage Doddsville, complete genome	20458-20489	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_028942	Mycobacterium phage Phipps, complete sequence	20718-20749	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KJ567044	Mycobacterium phage EmpTee, complete genome	20741-20772	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK279881	Mycobacterium phage Solosis, complete genome	20455-20486	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MG944223	Mycobacterium phage Trypo, complete genome	20740-20771	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MT897902	Mycobacterium phage Boehler, complete genome	20748-20779	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK279855	Mycobacterium phage Haleema, complete genome	20464-20495	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK494104	Mycobacterium phage HenryJackson, complete genome	20464-20495	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MG944225	Mycobacterium phage Xavier, complete genome	20458-20489	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	JN638753	Mycobacterium phage Morgushi, complete genome	20448-20479	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MG757158	Mycobacterium phage HighStump, complete genome	20447-20478	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MF668276	Mycobacterium phage Lulumae, complete genome	20443-20474	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MH513980	Mycobacterium phage Roy17, complete genome	20443-20474	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK279879	Mycobacterium phage SassyCat97, complete genome	20449-20480	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN586058	Mycobacterium phage Vaishali24, complete genome	20406-20437	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MT316460	Mycobacterium phage Kimbrough, complete genome	20453-20484	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	JF937097	Mycobacterium phage Hertubise, complete genome	20752-20783	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MH230874	Mycobacterium phage Banjo, complete genome	20436-20467	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MH651186	Mycobacterium phage Podrick, complete genome	20737-20768	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MG962362	Mycobacterium phage AltPhacts, complete genome	20725-20756	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	JF704103	Mycobacterium phage Vortex, complete sequence	20451-20482	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	FJ174694	Mycobacterium phage Chah, complete genome	20760-20791	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MH051264	Mycobacterium phage Cobra, complete genome	20745-20776	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK112536	Mycobacterium phage Cannibal, complete genome	20726-20757	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KC661274	Mycobacterium phage SDcharge11, complete genome	20717-20748	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KJ194579	Mycobacterium phage Swish, complete genome	20734-20765	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KY385382	Mycobacterium phage ImtiyazSitla, complete genome	20294-20325	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	JN699010	Mycobacterium phage TallGrassMM, complete genome	20373-20404	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK279891	Mycobacterium phage Wallhey, complete genome	20308-20339	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK112527	Mycobacterium phage Altwerkus, complete genome	20425-20456	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_028691	Mycobacterium phage Apizium, complete genome	20490-20521	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MH371125	Mycobacterium phage Morty, complete genome	20751-20782	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	JF937109	Mycobacterium phage Yoshand, complete genome	20747-20778	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN945903	Mycobacterium phage Jiminy, complete genome	20298-20329	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KM363597	Mycobacteriophage Zonia, complete genome	20758-20789	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KR816508	Mycobacterium phage Phamished, complete genome	20748-20779	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	JF937095	Mycobacterium phage Harvey, complete genome	20759-20790	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK279861	Mycobacterium phage Legolas, complete genome	20459-20490	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK279890	Mycobacterium phage Veritas, complete genome	20307-20338	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KM408320	Mycobacterium phage Lasso, complete genome	20718-20749	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KR029086	Mycobacterium phage PDRPv, complete genome	20322-20353	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KY385380	Mycobacterium phage Ashraf, complete genome	20294-20325	8	0.75
NZ_CP020039_7	7.1\|2496206\|35\|NZ_CP020039\|CRISPRCasFinder	2496206-2496240	35	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	312575-312609	8	0.771
NZ_CP020039_12	12.3\|4363293\|38\|NZ_CP020039\|CRT	4363293-4363330	38	NZ_CP016313	Thermus brockianus strain GE-1 plasmid pTB1, complete sequence	119931-119968	8	0.789
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	NZ_CP034811	Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence	35097-35128	8	0.75
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	NZ_CP014169	Sphingomonas panacis strain DCY99 plasmid unnamed, complete sequence	205178-205209	8	0.75
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1706323-1706354	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	218792-218823	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN234171	Mycobacterium phage Magpie, complete genome	31770-31801	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KX589269	Mycobacterium phage Fortunato, complete genome	31926-31957	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MT639648	Mycobacterium phage Heath, complete genome	31528-31559	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_042035	Mycobacterium phage Zemanar, complete sequence	31930-31961	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_022331	Mycobacterium phage Bane1, complete genome	31603-31634	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KF279413	Mycobacterium phage Bane2, complete genome	31582-31613	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MT310870	Mycobacterium phage RawrgerThat, complete genome	31929-31960	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KF279411	Mycobacterium phage Adawi, complete genome	30603-30634	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KY224000	Mycobacterium phage Rich, complete genome	31692-31723	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5852038-5852069	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP003425	Serratia sp. SCBI plasmid SCBI_Pl, complete sequence	13673-13704	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP054618	Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence	122510-122541	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KM389306	UNVERIFIED: Escherichia phage Phi06_2974 B clone contig00001 genomic sequence	5998-6029	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN694400	Marine virus AFVG_250M1011, complete genome	20542-20573	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_031074	Gordonia phage Bantam, complete genome	47063-47094	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN693628	Marine virus AFVG_250M875, complete genome	19354-19385	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	993438-993469	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	992538-992569	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	889873-889904	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP024924	Sphingomonas sp. Cra20 plasmid unnamed, complete sequence	48611-48642	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP045329	Labrenzia sp. THAF191b plasmid pTHAF191b_a, complete sequence	42450-42481	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP054608	Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed9, complete sequence	51155-51186	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP045345	Labrenzia sp. THAF187b plasmid pTHAF187b_a, complete sequence	363140-363171	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP045335	Labrenzia sp. THAF191a plasmid pTHAF191a_b, complete sequence	333092-333123	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP045381	Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence	259974-260005	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_AP018497	Mycobacterium marinum strain ATCC 927 plasmid pMMRN, complete sequence	27432-27463	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	962126-962157	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP015322	Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence	622693-622724	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	888970-889001	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	894611-894642	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	894601-894632	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP005085	Sphingobium sp. TKS plasmid pTK1, complete sequence	300116-300147	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	889865-889896	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	889883-889914	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	889856-889887	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	993525-993556	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP049249	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence	279148-279179	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	993522-993553	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	993506-993537	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MH509446	Gordonia phage DelRio, complete genome	25126-25157	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN694717	Marine virus AFVG_250M1062, complete genome	26480-26511	9	0.719
NZ_CP020039_12	12.5\|4363410\|38\|NZ_CP020039\|CRT	4363410-4363447	38	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	894806-894843	9	0.763
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	NZ_CP042333	Bosea sp. F3-2 plasmid pB32-2, complete sequence	197859-197890	9	0.719
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	312966-312997	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_LR134447	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 5, complete sequence	224850-224881	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	433727-433758	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN657140	Cryobacterium sp. strain ANT_H26B plasmid pA26BH1, complete sequence	69655-69686	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_HG917973	Mycobacterium marinum E11 plasmid pRAW, complete sequence	79209-79240	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP021084	Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence	282454-282485	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	377191-377222	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	677990-678021	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_005045	Pseudomonas phage phiKMV, complete genome	14122-14153	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MT446412	UNVERIFIED: Escherichia virus TH41, complete genome	150536-150567	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN908687	Gordonia phage Skog, complete genome	149222-149253	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	AJ505558	Bacteriophage phiKMV complete genome	14122-14153	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KC969441	UNVERIFIED: Pseudomonas phage MBL, complete genome	14266-14297	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN692672	Pseudomonas phage vB_PaeP_Lx18, complete genome	30183-30214	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN615698	Pseudomonas phage vB_PaeP_SPCB, complete genome	14658-14689	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NC_008195	Mycobacterium phage Cooper, complete genome	31108-31139	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MK977696	Gordonia phage SCentae, complete genome	119744-119775	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MW149105	Microvirus sp. isolate gila28, complete genome	5503-5534	10	0.688
NZ_CP020039_12	12.6\|4363467\|32\|NZ_CP020039\|CRT	4363467-4363498	32	NZ_CP044989	Deinococcus sp. AJ005 plasmid p380k, complete sequence	108777-108808	10	0.688
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	272656-272687	11	0.656
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	CP007642	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803a, complete sequence	198944-198975	11	0.656
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MH979674	Pseudomonas phage RLP, complete genome	119-150	11	0.656
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KR080197	Mycobacterium phage FlagStaff, complete genome	22991-23022	11	0.656
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	KM067278	Pseudomonas phage vB_PaeP_PPA-ABTNL, complete genome	14741-14772	11	0.656
NZ_CP020039_6	6.8\|2133779\|32\|NZ_CP020039\|CRT	2133779-2133810	32	MN871455	UNVERIFIED: Pseudomonas phage Pa-B, complete genome	27178-27209	11	0.656

1. spacer 17.1|6069964|22|NZ_CP020039|CRISPRCasFinder matches to KX641266 (Mycobacterium phage Terror, complete genome) position: , mismatch: 1, identity: 0.955

ggcggcgaagaaggcagcaccc	CRISPR spacer
ggcggcgaagaaggccgcaccc	Protospacer
*************** ******

2. spacer 17.1|6069964|22|NZ_CP020039|CRISPRCasFinder matches to KX641265 (Mycobacterium phage Taheera, complete genome) position: , mismatch: 1, identity: 0.955

ggcggcgaagaaggcagcaccc	CRISPR spacer
ggcggcgaagaaggccgcaccc	Protospacer
*************** ******

3. spacer 6.4|2133587|23|NZ_CP020039|CRT matches to NZ_CP012918 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p4, complete sequence) position: , mismatch: 2, identity: 0.913

ggcgcgggtacgagggacggtcg	CRISPR spacer
ggcgcggctaccagggacggtcg	Protospacer
******* *** ***********

4. spacer 17.1|6069964|22|NZ_CP020039|CRISPRCasFinder matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 2, identity: 0.909

ggcggcgaagaaggcagcaccc	CRISPR spacer
ggcgccgaagaaggcagcacca	Protospacer
**** ****************

5. spacer 17.1|6069964|22|NZ_CP020039|CRISPRCasFinder matches to NZ_CP028919 (Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

ggcggcgaagaaggcagcaccc	CRISPR spacer
ggcggcgaggaaggcagcaccg	Protospacer
********.************

6. spacer 17.1|6069964|22|NZ_CP020039|CRISPRCasFinder matches to MK801727 (Gordonia phage ThankyouJordi, complete genome) position: , mismatch: 2, identity: 0.909

ggcggcgaagaaggcagcaccc	CRISPR spacer
ggcggcgaagaaggccgcaccg	Protospacer
*************** *****

7. spacer 17.1|6069964|22|NZ_CP020039|CRISPRCasFinder matches to MH779505 (Mycobacterium phage Grizzly, complete genome) position: , mismatch: 2, identity: 0.909

ggcggcgaagaaggcagcaccc	CRISPR spacer
cgcggcgaagaaggccgcaccc	Protospacer
 ************** ******

8. spacer 17.1|6069964|22|NZ_CP020039|CRISPRCasFinder matches to MK524494 (Mycobacterium phage Rabbs, complete genome) position: , mismatch: 2, identity: 0.909

ggcggcgaagaaggcagcaccc	CRISPR spacer
cgcggcgaagaaggccgcaccc	Protospacer
 ************** ******

9. spacer 17.1|6069964|22|NZ_CP020039|CRISPRCasFinder matches to NC_031102 (Mycobacterium phage Sneeze, complete genome) position: , mismatch: 2, identity: 0.909

ggcggcgaagaaggcagcaccc	CRISPR spacer
cgcggcgaagaaggccgcaccc	Protospacer
 ************** ******

10. spacer 17.1|6069964|22|NZ_CP020039|CRISPRCasFinder matches to MT723938 (Gordonia phage Bunnybear, complete genome) position: , mismatch: 2, identity: 0.909

ggcggcgaagaaggcagcaccc	CRISPR spacer
ggcggcgaagaaggccgcaccg	Protospacer
*************** *****

11. spacer 17.1|6069964|22|NZ_CP020039|CRISPRCasFinder matches to MK875793 (Gordonia phage WelcomeAyanna, complete genome) position: , mismatch: 2, identity: 0.909

ggcggcgaagaaggcagcaccc	CRISPR spacer
ggcggcgaagaaggccgcaccg	Protospacer
*************** *****

12. spacer 17.1|6069964|22|NZ_CP020039|CRISPRCasFinder matches to MN234185 (Mycobacterium phage Lemuria, complete genome) position: , mismatch: 2, identity: 0.909

ggcggcgaagaaggcagcaccc	CRISPR spacer
gccggcgaagaaggcagcaccg	Protospacer
* *******************

13. spacer 17.1|6069964|22|NZ_CP020039|CRISPRCasFinder matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 3, identity: 0.864

ggcggcgaagaaggcagcaccc	CRISPR spacer
tgcggcgaagaaggcagcacgg	Protospacer
 *******************

14. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to JX163858 (Caulobacter phage phiCbK, complete genome) position: , mismatch: 5, identity: 0.821

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
gaccgccgagccgccgccagggcaggct	Protospacer
***************  *******. *.

15. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to KY555147 (Caulobacter phage Ccr34, complete genome) position: , mismatch: 5, identity: 0.821

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
gaccgccgagccgccgccagggcaggct	Protospacer
***************  *******. *.

16. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to KY555145 (Caulobacter phage Ccr29, complete genome) position: , mismatch: 5, identity: 0.821

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
gaccgccgagccgccgccagggcaggct	Protospacer
***************  *******. *.

17. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to KY555143 (Caulobacter phage Ccr2, complete genome) position: , mismatch: 5, identity: 0.821

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
gaccgccgagccgccgccagggcaggct	Protospacer
***************  *******. *.

18. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to NC_019410 (Caulobacter phage CcrKarma, complete genome) position: , mismatch: 5, identity: 0.821

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
gaccgccgagccgccgccagggcaggct	Protospacer
***************  *******. *.

19. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to KY555146 (Caulobacter phage Ccr32, complete genome) position: , mismatch: 5, identity: 0.821

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
gaccgccgagccgccgccagggcaggct	Protospacer
***************  *******. *.

20. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to NC_019407 (Caulobacter phage CcrMagneto, complete genome) position: , mismatch: 5, identity: 0.821

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
gaccgccgagccgccgccagggcaggct	Protospacer
***************  *******. *.

21. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to KY555144 (Caulobacter phage Ccr5, complete genome) position: , mismatch: 5, identity: 0.821

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
gaccgccgagccgccgccagggcaggct	Protospacer
***************  *******. *.

22. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to KY555142 (Caulobacter phage Ccr10, complete genome) position: , mismatch: 5, identity: 0.821

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
gaccgccgagccgccgccagggcaggct	Protospacer
***************  *******. *.

23. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to NC_019411 (Caulobacter phage CcrSwift, complete genome) position: , mismatch: 5, identity: 0.821

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
gaccgccgagccgccgccagggcaggct	Protospacer
***************  *******. *.

24. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
cccacccgagccgaccgcagggcatccc	Protospacer
  *  ******** ********** ***

25. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ccagaccgccgccaccgccgccgaaggcccgc	Protospacer
  *.*******************.***  **

26. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcagca	Protospacer
 *  ******************** ** *  *

27. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 7, identity: 0.781

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggccaccgcggccaccgccgccggagcgatct	Protospacer
**  ***** **************** **.

28. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 7, identity: 0.781

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
agaaatcgccgccaccgccgccggtgcgggaa	Protospacer
.****.****************** * *. .*

29. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcagca	Protospacer
 *  ******************** ** *  *

30. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcagca	Protospacer
 *  ******************** ** *  *

31. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_LR134461 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 19, complete sequence) position: , mismatch: 7, identity: 0.781

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggtagccgccgccaccgccgccgggacgaccg	Protospacer
** *.*******************.. *** .

32. spacer 12.3|4363293|38|NZ_CP020039|CRT matches to NZ_CP029835 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.816

ggcctgggcttccgcctcgggggcggc---ctcggcctgct	CRISPR spacer
ggcctgggcttccgcctcgatggcggcgcgctgcgcct---	Protospacer
*******************. ******   **  ****

33. spacer 12.3|4363293|38|NZ_CP020039|CRT matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 7, identity: 0.816

ggcctgggcttccgcctcgggggcggc---ctcggcctgct	CRISPR spacer
ggcctgggcttccgcctcgatggcggcgcgttccgcct---	Protospacer
*******************. ******   .** ****

34. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 7, identity: 0.781

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
ctgcggcgcatcctgcgcctccggcgcggcga	Protospacer
*   ** **.*******************.*.

35. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 7, identity: 0.781

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
ctgcggcgcatcctgcgcctccggcgcggcga	Protospacer
*   ** **.*******************.*.

36. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 7, identity: 0.781

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
cgcgcgagcgtcctgcgcctctggatggatga	Protospacer
**** ****************.**   *.**.

37. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to MF417923 (Uncultured Caudovirales phage clone 7S_12, partial genome) position: , mismatch: 7, identity: 0.781

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
gtctgcatcgtcctgcgcctccggcgccttgg	Protospacer
  * * * *******************  ***

38. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to MF417935 (Uncultured Caudovirales phage clone 8F_1, partial genome) position: , mismatch: 7, identity: 0.781

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
gtctgcatcgtcctgcgcctccggcgccttgg	Protospacer
  * * * *******************  ***

39. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to MF417934 (Uncultured Caudovirales phage clone 8AX_6, partial genome) position: , mismatch: 7, identity: 0.781

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
gtctgcatcgtcctgcgcctccggcgccttgg	Protospacer
  * * * *******************  ***

40. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to MF417919 (Uncultured Caudovirales phage clone 3S_10, partial genome) position: , mismatch: 7, identity: 0.781

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
gtctgcatcgtcctgcgcctccggcgccttgg	Protospacer
  * * * *******************  ***

41. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to MF417936 (Uncultured Caudovirales phage clone 8S_5, partial genome) position: , mismatch: 7, identity: 0.781

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
gtctgcatcgtcctgcgcctccggcgccttgg	Protospacer
  * * * *******************  ***

42. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to MF417922 (Uncultured Caudovirales phage clone 7AX_5, partial genome) position: , mismatch: 7, identity: 0.781

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
gtctgcatcgtcctgcgcctccggcgccttgg	Protospacer
  * * * *******************  ***

43. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to MF417924 (Uncultured Caudovirales phage clone 9F_3, partial genome) position: , mismatch: 7, identity: 0.781

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
gtctgcatcgtcctgcgcctccggcgccttgg	Protospacer
  * * * *******************  ***

44. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to MF417917 (Uncultured Caudovirales phage clone 7F_10, partial genome) position: , mismatch: 7, identity: 0.781

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
gtctgcatcgtcctgcgcctccggcgccttgg	Protospacer
  * * * *******************  ***

45. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 7, identity: 0.781

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
cgcctgccggtcctgcgcatccggcgcggcgg	Protospacer
***  *   ********* **********.**

46. spacer 15.1|4938020|28|NZ_CP020039|CRISPRCasFinder matches to NZ_CP027299 (Streptomyces sp. SGAir0924 plasmid unnamed_5) position: , mismatch: 7, identity: 0.75

gaccgccgagccgcccgcagggcaaccc	CRISPR spacer
cgccgccgagccgcccgccgggctcgac	Protospacer
 .**************** ****    *

47. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_022063 (Mycobacterium phage Phelemich, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccaccgccgccggaggcgtag	Protospacer
 *  *********************** ....

48. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to GU936714 (Synechococcus phage S-CBS2, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccaccgccgccggaggttgag	Protospacer
 *  ***********************   ..

49. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KF024727 (Mycobacterium phage Reprobate, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccaccgccgccggaggcgtag	Protospacer
 *  *********************** ....

50. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_041965 (Mycobacterium phage Athena, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggataccgccgcctccgccgccggatccgccg	Protospacer
*** ********* ***********   .* .

51. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

52. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

53. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

54. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

55. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

56. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

57. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
taccaccgccgccaccgccgccggcggcagca	Protospacer
 .  ******************** ** *  *

58. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

59. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaggccgccgccaccgccgccgatccggcgg	Protospacer
***..******************.   *.**.

60. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

61. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

62. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

63. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

64. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

65. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

66. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

67. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

68. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

69. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

70. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

71. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

72. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

73. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

74. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

75. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

76. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

77. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

78. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

79. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

80. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

81. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

82. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

83. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

84. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

85. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

86. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

87. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

88. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

89. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

90. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

91. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

92. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

93. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

94. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

95. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

96. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

97. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

98. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

99. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

100. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

101. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

102. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

103. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

104. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

105. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

106. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

107. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

108. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

109. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

110. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

111. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

112. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgccggcggcggca	Protospacer
 *  ******************** ** .  *

113. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN734437 (Sphingomonas phage Eidolon, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cggaaccgccgcccccgccgccggaaggcgtt	Protospacer
 *.********** ***********.**

114. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN234207 (Gordonia phage Ranch, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgatgccgccgcccccgccgccggagggtgcg	Protospacer
 ** .******** **************   .

115. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_023498 (Mycobacterium phage Validus, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaaaccgccgccagcgccgccgccgccgggc	Protospacer
************** ********  *  . *

116. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaaaccgcggccaccgccaccggtgcaatcg	Protospacer
********* *********.**** * .*. .

117. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaatcgccgccaccgccaccgggaccacca	Protospacer
 ****.*************.****..  ** *

118. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaaaccgcggccaccgccaccggtgcaatcg	Protospacer
********* *********.**** * .*. .

119. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaaaccgcggccaccgccaccggtgcaatcg	Protospacer
********* *********.**** * .*. .

120. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaaaccgcggccaccgccaccggtgcaatcg	Protospacer
********* *********.**** * .*. .

121. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaaaccgcggccaccgccaccggtgcaatcg	Protospacer
********* *********.**** * .*. .

122. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaaaccgcggccaccgccaccggtgcaatcg	Protospacer
********* *********.**** * .*. .

123. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
gcagcgcgccgacgccgccgccggagggaccg	Protospacer
* *.  ***** *.**************** .

124. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
aggagctgccgccatcgcggccggagggacag	Protospacer
.*.*.*.*******.*** ***********..

125. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP031116 (Rubrobacter indicoceani strain SCSIO 08198 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgactactccgcgaccgccgccggaggggcgt	Protospacer
 **   * **** ***************.**

126. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
gccagccgccgccaccgtcgccggatgggaaa	Protospacer
*  *.************.******* **. .*

127. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggcacccgccgccaccgccgccgcaaagttgg	Protospacer
** * ****************** *..* .*.

128. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgccgcccccgccgccgccgaagcca	Protospacer
****.******** *********  *...* *

129. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP026518 (Deinococcus sp. NW-56 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccg-----gagggacga	CRISPR spacer
ggaaaccgccgccgccaccgccgcccttgaag-----	Protospacer
*************.**.******     **.*

130. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgccgccgccgccgccgcccggctgg	Protospacer
****.********.*********   ** .*.

131. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggcacccgccgccaccgccgccgcaaagttgg	Protospacer
** * ****************** *..* .*.

132. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK279887 (Mycobacterium phage Timmi, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

133. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MG925339 (Mycobacterium phage Chunky, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

134. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to GU247134 (Mycobacterium phage Scoot17C, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

135. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to JF957056 (Mycobacterium phage Thora, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

136. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MT316463 (Mycobacterium phage Slatt, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

137. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KX576645 (Mycobacterium phage Derpp, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

138. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KX670813 (Mycobacterium phage MitKao, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

139. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MH576970 (Mycobacterium phage DonSanchon, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

140. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK279866 (Mycobacterium phage MRabcd, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

141. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MH513973 (Mycobacterium phage Kwksand96, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

142. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK524512 (Mycobacterium phage Carthage, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

143. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK279908 (Mycobacterium phage Roliet, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

144. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KY006474 (Mycobacterium phage Prann, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

145. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_027985 (Mycobacterium phage UncleHowie, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

146. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to JN698990 (Mycobacterium phage IsaacEli, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

147. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KY965066 (Mycobacterium phage BlackStallion, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

148. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN703415 (Mycobacterium phage Mcshane, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

149. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MH051251 (Mycobacterium phage DuchessDung, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

150. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KX576646 (Mycobacterium phage TyrionL, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

151. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK279871 (Mycobacterium phage Plmatters, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

152. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK279883 (Mycobacterium phage Struggle, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

153. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN096366 (Mycobacterium phage AbsoluteMadLad, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

154. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MH371107 (Mycobacterium phage Doddsville, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

155. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_028942 (Mycobacterium phage Phipps, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

156. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KJ567044 (Mycobacterium phage EmpTee, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

157. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK279881 (Mycobacterium phage Solosis, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

158. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MG944223 (Mycobacterium phage Trypo, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

159. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MT897902 (Mycobacterium phage Boehler, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

160. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK279855 (Mycobacterium phage Haleema, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

161. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK494104 (Mycobacterium phage HenryJackson, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

162. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MG944225 (Mycobacterium phage Xavier, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

163. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to JN638753 (Mycobacterium phage Morgushi, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

164. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MG757158 (Mycobacterium phage HighStump, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

165. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MF668276 (Mycobacterium phage Lulumae, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

166. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MH513980 (Mycobacterium phage Roy17, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

167. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK279879 (Mycobacterium phage SassyCat97, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

168. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN586058 (Mycobacterium phage Vaishali24, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

169. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MT316460 (Mycobacterium phage Kimbrough, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

170. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to JF937097 (Mycobacterium phage Hertubise, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

171. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MH230874 (Mycobacterium phage Banjo, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

172. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MH651186 (Mycobacterium phage Podrick, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

173. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MG962362 (Mycobacterium phage AltPhacts, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

174. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to JF704103 (Mycobacterium phage Vortex, complete sequence) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

175. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to FJ174694 (Mycobacterium phage Chah, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

176. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MH051264 (Mycobacterium phage Cobra, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

177. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK112536 (Mycobacterium phage Cannibal, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

178. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KC661274 (Mycobacterium phage SDcharge11, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

179. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KJ194579 (Mycobacterium phage Swish, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

180. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KY385382 (Mycobacterium phage ImtiyazSitla, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

181. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to JN699010 (Mycobacterium phage TallGrassMM, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

182. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK279891 (Mycobacterium phage Wallhey, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

183. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK112527 (Mycobacterium phage Altwerkus, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

184. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_028691 (Mycobacterium phage Apizium, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

185. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MH371125 (Mycobacterium phage Morty, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

186. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to JF937109 (Mycobacterium phage Yoshand, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

187. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN945903 (Mycobacterium phage Jiminy, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

188. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KM363597 (Mycobacteriophage Zonia, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

189. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KR816508 (Mycobacterium phage Phamished, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

190. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to JF937095 (Mycobacterium phage Harvey, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

191. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK279861 (Mycobacterium phage Legolas, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

192. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK279890 (Mycobacterium phage Veritas, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

193. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KM408320 (Mycobacterium phage Lasso, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgtcgga	Protospacer
 ********* **.**********. *   **

194. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KR029086 (Mycobacterium phage PDRPv, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

195. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KY385380 (Mycobacterium phage Ashraf, complete genome) position: , mismatch: 8, identity: 0.75

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgcccccgccgccgccgggtgccgga	Protospacer
 ********* **.**********. *   **

196. spacer 7.1|2496206|35|NZ_CP020039|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.771

ccgccgagctacggcctcgccgcccgcttcagccc	CRISPR spacer
cccgtgacctacgacctcgccgcccgcttcgccca	Protospacer
**  .** *****.****************. **

197. spacer 12.3|4363293|38|NZ_CP020039|CRT matches to NZ_CP016313 (Thermus brockianus strain GE-1 plasmid pTB1, complete sequence) position: , mismatch: 8, identity: 0.789

ggcctgggcttccgcctcgggggcggcc-tcggcctgct	CRISPR spacer
ggcctgggtttccgcctcgggggcgccctttaggatgt-	Protospacer
********.**************** ** *..*  **.

198. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to NZ_CP034811 (Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcg-ggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
-gcacagcgcgtccagcgcctcctgcgcggtct	Protospacer
 **. .* ****** ******** *******

199. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to NZ_CP014169 (Sphingomonas panacis strain DCY99 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
ccgcgccgcgtccttcgcatccggcgcggtcg	Protospacer
*   *  ******* *** *********** *

200. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaacctccgccaccgccgccgggccggtct	Protospacer
 ****** ****************.  *..

201. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaaaccgccgccacccacgccgaacccttca	Protospacer
****************  *****.*    . *

202. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN234171 (Mycobacterium phage Magpie, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccaccgccaccggaggcgtag	Protospacer
 *  ***************.******* ....

203. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KX589269 (Mycobacterium phage Fortunato, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccaccgccaccggaggcgtag	Protospacer
 *  ***************.******* ....

204. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MT639648 (Mycobacterium phage Heath, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccaccgccaccggaggcgtag	Protospacer
 *  ***************.******* ....

205. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_042035 (Mycobacterium phage Zemanar, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccaccgccaccggaggcgtag	Protospacer
 *  ***************.******* ....

206. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_022331 (Mycobacterium phage Bane1, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccaccgccaccggaggcgtag	Protospacer
 *  ***************.******* ....

207. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KF279413 (Mycobacterium phage Bane2, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccaccgccaccggaggcgtag	Protospacer
 *  ***************.******* ....

208. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MT310870 (Mycobacterium phage RawrgerThat, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccaccgccaccggaggcgtag	Protospacer
 *  ***************.******* ....

209. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KF279411 (Mycobacterium phage Adawi, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccaccgccgcccgaggcgtag	Protospacer
 *  ****************** **** ....

210. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KY224000 (Mycobacterium phage Rich, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccacctccgccggaggcgtag	Protospacer
 *  ************ ********** ....

211. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgaaaccgccaccgccgccgccggacccgccg	Protospacer
 *********.**.***********   .* .

212. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP003425 (Serratia sp. SCBI plasmid SCBI_Pl, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
caccaccgccgccaccgccgcctgacggccac	Protospacer
 .  ****************** ** ** *.

213. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgccgccaccgtccccggcgacgaaa	Protospacer
 ****************.* **** *. . .*

214. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KM389306 (UNVERIFIED: Escherichia phage Phi06_2974 B clone contig00001 genomic sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
aatacacgccgccaccgccgctggagcgactg	Protospacer
.. *  ***************.**** *** .

215. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN694400 (Marine virus AFVG_250M1011, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ccccaccgccgccaccgccgccgccgggttgg	Protospacer
    *******************  *** .*.

216. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_031074 (Gordonia phage Bantam, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tcgacgcgccgccaccgccgcttgagggaccg	Protospacer
  .*  ***************. ******* .

217. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN693628 (Marine virus AFVG_250M875, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ccccaccgccgccaccgccgccgccgggttgg	Protospacer
    *******************  *** .*.

218. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccatcg	Protospacer
****.***** ************..*  *. .

219. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccattg	Protospacer
****.***** ************..*  *. .

220. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccatcg	Protospacer
****.***** ************..*  *. .

221. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP024924 (Sphingomonas sp. Cra20 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgaaaccgccgaccccgccgccggcatggagg	Protospacer
 ********** * ********** . *. *.

222. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP045329 (Labrenzia sp. THAF191b plasmid pTHAF191b_a, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgccgacaccgccgccgtcgactaca	Protospacer
****.****** ***********  *.    *

223. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP054608 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed9, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaaaccggccccaccgccgccgtgatggccg	Protospacer
******** * ************ .. *.* .

224. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP045345 (Labrenzia sp. THAF187b plasmid pTHAF187b_a, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgccgacaccgccgccgtcgactaca	Protospacer
****.****** ***********  *.    *

225. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP045335 (Labrenzia sp. THAF191a plasmid pTHAF191a_b, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgccgacaccgccgccgtcgactaca	Protospacer
****.****** ***********  *.    *

226. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP045381 (Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgccgacaccgccgccgtcgactaca	Protospacer
****.****** ***********  *.    *

227. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_AP018497 (Mycobacterium marinum strain ATCC 927 plasmid pMMRN, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
aggtgccgcctcctccgccgccggagggcggg	Protospacer
.*. .***** ** **************  *.

228. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccatcg	Protospacer
****.***** ************..*  *. .

229. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgaaaccgctgccgccgccgccggcatagcgg	Protospacer
 ********.***.********** . ..**.

230. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccatcg	Protospacer
****.***** ************..*  *. .

231. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccatcg	Protospacer
****.***** ************..*  *. .

232. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccatcg	Protospacer
****.***** ************..*  *. .

233. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP005085 (Sphingobium sp. TKS plasmid pTK1, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgccaccgccgccaccgccgacggtggagctg	Protospacer
 *  **************** *** **..* .

234. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccatcg	Protospacer
****.***** ************..*  *. .

235. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccatcg	Protospacer
****.***** ************..*  *. .

236. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccatcg	Protospacer
****.***** ************..*  *. .

237. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccatcg	Protospacer
****.***** ************..*  *. .

238. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgatcacgctgccaccgccgccgaagggatag	Protospacer
 **   ***.*************.*****...

239. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccatcg	Protospacer
****.***** ************..*  *. .

240. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagccgcctccaccgccgccgaggccatcg	Protospacer
****.***** ************..*  *. .

241. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgagaccgccgacaccgccgccggccgacagc	Protospacer
 **.******* ************  *.  *

242. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN694717 (Marine virus AFVG_250M1062, complete genome) position: , mismatch: 9, identity: 0.719

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggacaccgccgccaccgccaccgtctgggtcg	Protospacer
*** ***************.***   **.. .

243. spacer 12.5|4363410|38|NZ_CP020039|CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.763

---ggcctgggctttcgcctcgggggcggcctcggcctgct	CRISPR spacer
ttcggcgaaga---tcgcctcggcggtggcctcggcctgct	Protospacer
   ***  .*.   ********* **.**************

244. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to NZ_CP042333 (Bosea sp. F3-2 plasmid pB32-2, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
ctacatcacggcctgcgcctccggcgcggcgg	Protospacer
*   .  .** ******************.**

245. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ctgtgccgccgccaccgcctccggacgggtgc	Protospacer
  . .************** ***** **..*

246. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_LR134447 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 5, complete sequence) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagtcgccgccaccgccgccgtactcctcg	Protospacer
****..***************** *    . .

247. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ggaagtcgccgccaccgccgccgtattcttcc	Protospacer
****..***************** *    .

248. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN657140 (Cryobacterium sp. strain ANT_H26B plasmid pA26BH1, complete sequence) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cagcaccgccgcccccaccgccggaggccagg	Protospacer
 .. ********* **.**********   *.

249. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_HG917973 (Mycobacterium marinum E11 plasmid pRAW, complete sequence) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
aggtgccgcctcctccgccgccggagggggcg	Protospacer
.*. .***** ** **************.  .

250. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP021084 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cggggagtccgccaccgccgccggctggacgg	Protospacer
 *...   ****************  *****.

251. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tcaacccgctgccaccgccgccggacatgctc	Protospacer
  ** ****.*************** . .*

252. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
agctgacgccgccaccggcgccggcgggagac	Protospacer
.*  . *********** ****** **** .

253. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_005045 (Pseudomonas phage phiKMV, complete genome) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgcgaccgccgccaccgccggtggaggtttcg	Protospacer
 * .**************** .*****  . .

254. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MT446412 (UNVERIFIED: Escherichia virus TH41, complete genome) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cggcaccgccgccaccaccaccggaggctatc	Protospacer
 *. ************.**.*******

255. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN908687 (Gordonia phage Skog, complete genome) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccaccgcctccgccgccggaggtttcc	Protospacer
 *  ***.***** *************  .

256. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to AJ505558 (Bacteriophage phiKMV complete genome) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgcgaccgccgccaccgccggtggaggtttcg	Protospacer
 * .**************** .*****  . .

257. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KC969441 (UNVERIFIED: Pseudomonas phage MBL, complete genome) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgcgaccgccgccaccgccggtggaggtttcg	Protospacer
 * .**************** .*****  . .

258. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN692672 (Pseudomonas phage vB_PaeP_Lx18, complete genome) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgcgaccgccgccaccgccggtggaggtttcg	Protospacer
 * .**************** .*****  . .

259. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN615698 (Pseudomonas phage vB_PaeP_SPCB, complete genome) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
tgcgaccgccgccaccgccggtggaggtttcg	Protospacer
 * .**************** .*****  . .

260. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NC_008195 (Mycobacterium phage Cooper, complete genome) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccaccgccaccgccaccggaggcgtag	Protospacer
 *  ***.***********.******* ....

261. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MK977696 (Gordonia phage SCentae, complete genome) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cgccaccgccgccgccaccgccggaggtctcc	Protospacer
 *  *********.**.**********  .

262. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MW149105 (Microvirus sp. isolate gila28, complete genome) position: , mismatch: 10, identity: 0.688

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
cggcaccgccgccaccgccaccgggggcggag	Protospacer
 *. ***************.****.** . ..

263. spacer 12.6|4363467|32|NZ_CP020039|CRT matches to NZ_CP044989 (Deinococcus sp. AJ005 plasmid p380k, complete sequence) position: , mismatch: 10, identity: 0.688

cgcgggagcgtcctgcgcctccggcgcggtgg	CRISPR spacer
acagttcacgtcctccgcatccggcgcggtgt	Protospacer
   *   .****** *** ************

264. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 11, identity: 0.656

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ccgcaccgtcgccaccgccgccgcaggcggtc	Protospacer
  . ****.************** *** .

265. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to CP007642 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803a, complete sequence) position: , mismatch: 11, identity: 0.656

---ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
aatggccgccgccaccgccgccgtcgggggca---	Protospacer
   **  .*****.**.******.***.** *

266. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MH979674 (Pseudomonas phage RLP, complete genome) position: , mismatch: 11, identity: 0.656

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ttcgaccgccgccaccgccggtggaggtttcg	Protospacer
   .**************** .*****  . .

267. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KR080197 (Mycobacterium phage FlagStaff, complete genome) position: , mismatch: 11, identity: 0.656

ggaaaccgccgccaccgccgccggagggacga---	CRISPR spacer
---aaccgccgccgccaccgccgccagggggtgcg	Protospacer
   **********.**.******  .**. *

268. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to KM067278 (Pseudomonas phage vB_PaeP_PPA-ABTNL, complete genome) position: , mismatch: 11, identity: 0.656

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ttcgaccgccgccaccgccggtggaggtttcg	Protospacer
   .**************** .*****  . .

269. spacer 6.8|2133779|32|NZ_CP020039|CRT matches to MN871455 (UNVERIFIED: Pseudomonas phage Pa-B, complete genome) position: , mismatch: 11, identity: 0.656

ggaaaccgccgccaccgccgccggagggacga	CRISPR spacer
ttcgaccgccgccaccgccggtggaggtttcg	Protospacer
   .**************** .*****  . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2098979 : 2106000

Streptomyces_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079404526.1\|2098979_2099660_+	nucleotidyltransferase	A0A1J0GW18	Streptomyces_phage	2.1e-15	38.3
WP_079404528.1\|2099648_2100407_-	nucleotidyltransferase	K4K696	Caulobacter_phage	1.2e-06	39.2
WP_079404529.1\|2100410_2101421_-	ADP-ribosylglycohydrolase family protein	G3M9X5	Bacillus_virus	1.3e-05	27.7
WP_030389211.1\|2101417_2102146_-	NUDIX hydrolase	A0A0E3JJF3	Streptomyces_phage	6.0e-21	45.7
WP_079404530.1\|2102142_2103222_-	AAA family ATPase	A0A2K8HHU5	Bacteriophage	6.6e-32	30.9
WP_053702667.1\|2103218_2103836_-	nicotinamide mononucleotide transporter	A0A0F6YPU8	Sinorhizobium_phage	1.3e-13	32.1
WP_079404532.1\|2103982_2105368_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_030389215.1\|2105367_2106000_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.4e-10	29.9

DBSCAN-SWA_2

4066169 : 4099168

Streptomyces_phage(96.97%)

head,terminase,portal,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079405444.1\|4066169_4067795_-	recombinase family protein	A0A1J0MCY2	Streptomyces_phage	2.5e-123	46.7
WP_159395611.1\|4068188_4068626_-	XRE family transcriptional regulator	NA	NA	NA	NA
WP_159395612.1\|4068967_4069180_+	hypothetical protein	NA	NA	NA	NA
WP_079405447.1\|4069176_4069380_+	hypothetical protein	A0A1J0MCC6	Streptomyces_phage	2.5e-09	76.1
WP_079405448.1\|4069479_4069851_+	hypothetical protein	A0A1V0E638	Streptomyces_phage	3.0e-24	57.0
WP_079405449.1\|4069850_4071050_+	hypothetical protein	A0A1V0E653	Streptomyces_phage	1.6e-116	65.7
WP_079407945.1\|4071199_4071736_+	hypothetical protein	A0A1J0MCK1	Streptomyces_phage	3.7e-60	68.2
WP_079405450.1\|4071732_4072245_+	hypothetical protein	K4HYF6	Streptomyces_phage	1.1e-08	44.4
WP_107470005.1\|4072831_4073212_+	hypothetical protein	A0A1V0E664	Streptomyces_phage	6.1e-25	56.9
WP_079405452.1\|4073208_4073913_+	cell surface glycoprotein	A0A1J0MCX6	Streptomyces_phage	2.0e-90	69.2
WP_159395613.1\|4073909_4074068_+	hypothetical protein	NA	NA	NA	NA
WP_079405453.1\|4074170_4074644_+	single-stranded DNA-binding protein	A0A2H4JEL4	uncultured_Caudovirales_phage	3.3e-44	59.2
WP_079405454.1\|4074731_4075193_+	hypothetical protein	A0A1J0MCK9	Streptomyces_phage	3.0e-10	63.8
WP_079405455.1\|4075189_4075426_+	hypothetical protein	NA	NA	NA	NA
WP_079405456.1\|4075422_4076217_+	hypothetical protein	NA	NA	NA	NA
WP_079405457.1\|4076213_4076450_+	hypothetical protein	NA	NA	NA	NA
WP_079405458.1\|4076463_4077306_+	hypothetical protein	A0A1J0MCS6	Streptomyces_phage	5.8e-92	66.8
WP_079405459.1\|4078415_4079219_+	hypothetical protein	NA	NA	NA	NA
WP_079405460.1\|4079301_4079562_+	hypothetical protein	A0A1J0MC82	Streptomyces_phage	3.8e-10	44.2
WP_079405461.1\|4079791_4080313_+	helix-turn-helix domain-containing protein	A0A1J0MCL8	Streptomyces_phage	1.4e-59	78.3
WP_079405462.1\|4080317_4081595_+\|terminase	PBSX family phage terminase large subunit	A0A1V0E630	Streptomyces_phage	3.8e-204	81.2
WP_079405463.1\|4081591_4081834_+	hypothetical protein	K4I025	Streptomyces_phage	4.2e-19	69.4
WP_079405464.1\|4081820_4083299_+\|portal	phage portal protein	A0A1J0MCN7	Streptomyces_phage	1.1e-205	71.2
WP_079405465.1\|4083335_4085540_+\|capsid	phage capsid protein	A0A1J0MCS2	Streptomyces_phage	2.2e-260	64.9
WP_079405466.1\|4085824_4086490_+	hypothetical protein	A0A1J0MD42	Streptomyces_phage	1.5e-05	34.8
WP_079405467.1\|4086555_4087413_+\|head	phage head protein	A0A1J0MCF0	Streptomyces_phage	1.5e-119	75.8
WP_079405468.1\|4087580_4087976_+	hypothetical protein	A0A1J0MCI1	Streptomyces_phage	3.4e-42	71.0
WP_079405469.1\|4087972_4088266_+	hypothetical protein	A0A1J0MCW8	Streptomyces_phage	3.4e-23	57.1
WP_079405470.1\|4088237_4088591_+	hypothetical protein	A0A1V0E617	Streptomyces_phage	1.6e-43	78.6
WP_079405471.1\|4088583_4088997_+	hypothetical protein	K4I035	Streptomyces_phage	5.1e-49	70.6
WP_079405472.1\|4089009_4089477_+	hypothetical protein	A0A1J0MCP1	Streptomyces_phage	2.2e-61	72.2
WP_079405473.1\|4089473_4089929_+	hypothetical protein	A0A1V0E637	Streptomyces_phage	6.4e-37	63.1
WP_079405474.1\|4090179_4092414_+	hypothetical protein	A0A1J0MCK8	Streptomyces_phage	1.1e-81	79.0
WP_079405475.1\|4092418_4093321_+	hypothetical protein	A0A1J0MCF9	Streptomyces_phage	3.0e-86	58.2
WP_079405476.1\|4093334_4094297_+	hypothetical protein	A0A1J0MCI7	Streptomyces_phage	2.2e-63	56.8
WP_079405477.1\|4094281_4095394_+	hypothetical protein	A0A1J0MCX4	Streptomyces_phage	1.9e-122	61.0
WP_079405478.1\|4095393_4096161_+	hypothetical protein	A0A1J0MCQ1	Streptomyces_phage	2.0e-43	41.4
WP_159395614.1\|4096255_4097776_+	hypothetical protein	NA	NA	NA	NA
WP_079405480.1\|4097845_4098646_+	N-acetylmuramoyl-L-alanine amidase	A0A2H4PI36	Streptomyces_phage	1.3e-64	51.0
WP_079405481.1\|4098674_4098902_+	hypothetical protein	A0A1J0MD62	Streptomyces_phage	6.9e-16	67.6
WP_079405482.1\|4098898_4099168_+	hypothetical protein	A0A1J0MCF7	Streptomyces_phage	3.0e-26	72.6

DBSCAN-SWA_3

4686390 : 4740998

Moumouvirus(14.29%)

protease,plate,tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079405757.1\|4686390_4688160_-\|tRNA	arginine--tRNA ligase	M1PAX3	Moumouvirus	1.8e-79	31.1
WP_053175373.1\|4688301_4690068_+\|tRNA	lysine--tRNA ligase	NA	NA	NA	NA
WP_079407988.1\|4690133_4691447_-	DUF2637 domain-containing protein	Q6VY65	Streptomyces_phage	5.1e-79	64.6
WP_051779499.1\|4691608_4692370_-	DUF3558 family protein	NA	NA	NA	NA
WP_079407989.1\|4692485_4693283_-	hypothetical protein	NA	NA	NA	NA
WP_079405758.1\|4693518_4694712_+	RtcB family protein	A0A1I9SAD2	Rhodococcus_phage	8.7e-126	58.6
WP_079405759.1\|4694791_4695598_-	hypothetical protein	NA	NA	NA	NA
WP_079405760.1\|4695807_4697304_+	hypothetical protein	NA	NA	NA	NA
WP_079405761.1\|4697369_4698488_+	glycosyltransferase	A0A1V0SAJ8	Catovirus	1.7e-46	33.9
WP_079405762.1\|4698565_4699237_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_030388058.1\|4699263_4700028_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_079405763.1\|4700205_4700724_+	hypothetical protein	NA	NA	NA	NA
WP_079405764.1\|4700720_4701449_-	Mut7-C ubiquitin/RNAse domain-containing protein	NA	NA	NA	NA
WP_030388061.1\|4701491_4701908_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_079407990.1\|4702042_4702939_+	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_053703929.1\|4702922_4703486_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_107470206.1\|4703554_4704283_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_079405765.1\|4704608_4705151_+	hypothetical protein	NA	NA	NA	NA
WP_079405766.1\|4705224_4705788_-\|tail	phage tail protein	NA	NA	NA	NA
WP_079405767.1\|4705784_4707764_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_030388067.1\|4707763_4708186_-	GPW/gp25 family protein	A0A1D8KT65	Synechococcus_phage	1.7e-07	30.8
WP_030388068.1\|4708185_4708503_-	hypothetical protein	NA	NA	NA	NA
WP_079405768.1\|4708554_4710372_-	VgrG-related protein	NA	NA	NA	NA
WP_030388070.1\|4710368_4711094_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_030388071.1\|4711202_4711628_-\|tail	phage tail protein	NA	NA	NA	NA
WP_079405769.1\|4711662_4714890_-	hypothetical protein	NA	NA	NA	NA
WP_030388072.1\|4715049_4715553_-	hypothetical protein	NA	NA	NA	NA
WP_030388073.1\|4715549_4715990_-\|tail	phage tail protein	NA	NA	NA	NA
WP_030388074.1\|4716031_4717591_-\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	3.4e-69	34.1
WP_079407992.1\|4717763_4719797_-	ATP-binding protein	A0A0R6PCP6	Moraxella_phage	4.0e-22	31.7
WP_079405770.1\|4719889_4720594_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_079405771.1\|4720590_4723773_-	hypothetical protein	NA	NA	NA	NA
WP_078626516.1\|4723983_4724667_-	response regulator transcription factor	NA	NA	NA	NA
WP_079407993.1\|4724871_4726230_+	hydrolytic protein	NA	NA	NA	NA
WP_079405772.1\|4726451_4726916_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_078626517.1\|4726995_4727595_-	hypothetical protein	NA	NA	NA	NA
WP_079405773.1\|4727728_4729051_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_030388081.1\|4729047_4729752_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_079407994.1\|4729918_4731154_+	hypothetical protein	NA	NA	NA	NA
WP_079405774.1\|4731241_4731868_+	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_030388084.1\|4731872_4732646_+	cytochrome C biogenesis protein CcdA	NA	NA	NA	NA
WP_030388085.1\|4732659_4734372_+	cytochrome c biogenesis protein ResB	NA	NA	NA	NA
WP_053177606.1\|4734368_4735466_+	c-type cytochrome biogenesis protein CcsB	NA	NA	NA	NA
WP_079405775.1\|4735491_4735995_+	hypothetical protein	NA	NA	NA	NA
WP_078626518.1\|4736176_4736581_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_107470025.1\|4736669_4737104_+	cupin	NA	NA	NA	NA
WP_030388090.1\|4737155_4737452_-	membrane protein	NA	NA	NA	NA
WP_030388091.1\|4737542_4738997_+	menaquinone biosynthesis decarboxylase	NA	NA	NA	NA
WP_079407995.1\|4738975_4739470_+	hypothetical protein	NA	NA	NA	NA
WP_107085048.1\|4739469_4740390_+	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_079405777.1\|4740401_4740998_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP020039.1|WP_078626517.1|4726995_4727595_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP020039.1|WP_078626517.1|4726995_4727595_-|hypothetical-protein

4726995_4727595_-

199 aa aa

4686390-4740998

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP020039_6	Orphan	6.5\|2133629\|20\|NZ_CP020039\|CRT	2133629-2133648	20	4719768-4719749	2
NZ_CP020039_6	Orphan	6.10\|2133872\|20\|NZ_CP020039\|CRT	2133872-2133891	20	4719768-4719749	2

1. spacer 6.5|2133629|20|NZ_CP020039|CRT matches to NZ_CP020039 position: 4719768-4719749, mismatch: 2

gcgggtaggacgggcggtcg	CRISPR spacer
gcgggtacgccgggcggtcg	Protospacer
******* * **********

2. spacer 6.10|2133872|20|NZ_CP020039|CRT matches to NZ_CP020039 position: 4719768-4719749, mismatch: 2

gcgggtaggacgggcggtcg	CRISPR spacer
gcgggtacgccgggcggtcg	Protospacer
******* * **********

2. NZ_CP020040

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

22708 : 101058

Gordonia_phage(14.29%)

integrase,transposase

attL 21192:21218|attR 61672:61698

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
21192:21218	attL	NA	NA	NA	NA
WP_079408254.1\|22708_23857_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_079408255.1\|23894_24356_-\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	4.1e-07	30.9
WP_159395755.1\|25953_26256_-	hypothetical protein	NA	NA	NA	NA
WP_159395756.1\|27025_27175_-	hypothetical protein	NA	NA	NA	NA
WP_159395757.1\|27404_28619_-	hypothetical protein	NA	NA	NA	NA
WP_159395758.1\|31821_32115_+	hypothetical protein	NA	NA	NA	NA
WP_079408257.1\|33046_33295_-	hypothetical protein	NA	NA	NA	NA
WP_107470299.1\|33291_33807_-	RNA polymerase subunit sigma-70	NA	NA	NA	NA
WP_079408258.1\|34294_35257_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_079408259.1\|35469_36144_+	hypothetical protein	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	2.6e-26	36.7
WP_159395759.1\|36480_36957_-	SRPBCC family protein	NA	NA	NA	NA
WP_159395760.1\|37724_38567_-	alpha/beta fold hydrolase	A7XCB7	Tanapox_virus	1.8e-05	32.8
WP_159395761.1\|39538_39814_+	hypothetical protein	NA	NA	NA	NA
WP_079408260.1\|42176_43355_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_159395762.1\|44916_45714_-	helix-turn-helix domain-containing protein	S5VXX4	Leptospira_phage	6.4e-16	28.0
WP_079408262.1\|56836_57124_+	hypothetical protein	NA	NA	NA	NA
WP_159395763.1\|57816_59034_-	plasmid partitioning protein	NA	NA	NA	NA
WP_079408264.1\|59030_60179_-	ParA family protein	A0A1X9I765	Streptococcus_phage	5.6e-05	24.0
WP_159395764.1\|66573_66768_-	hypothetical protein	NA	NA	NA	NA
61672:61698	attR	NA	NA	NA	NA
WP_159395765.1\|66889_67147_-	hypothetical protein	NA	NA	NA	NA
WP_079408468.1\|70199_70412_+\|transposase	transposase	NA	NA	NA	NA
WP_159395766.1\|72525_73026_-	hypothetical protein	NA	NA	NA	NA
WP_159395767.1\|75844_76792_-	hypothetical protein	NA	NA	NA	NA
WP_079408267.1\|76784_77681_-	ParA family protein	Q8JL10	Natrialba_phage	4.7e-07	25.7
WP_159395768.1\|79409_80030_-	hypothetical protein	NA	NA	NA	NA
WP_079408269.1\|80144_80948_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	1.4e-50	45.0
WP_079408270.1\|81215_81509_-	hypothetical protein	NA	NA	NA	NA
WP_159395769.1\|82370_82745_-\|transposase	transposase	NA	NA	NA	NA
WP_159395770.1\|83967_84348_+	cupin domain-containing protein	NA	NA	NA	NA
WP_107470268.1\|84610_84847_+	hypothetical protein	NA	NA	NA	NA
WP_159395771.1\|87247_88075_+	NAD(P)H-binding protein	NA	NA	NA	NA
WP_079408274.1\|89040_89442_-	hypothetical protein	NA	NA	NA	NA
WP_107470331.1\|89523_89646_-	hypothetical protein	NA	NA	NA	NA
WP_159395772.1\|89680_90037_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_079408470.1\|90106_90895_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_159395773.1\|92414_92780_+	hypothetical protein	NA	NA	NA	NA
WP_107470271.1\|96089_96746_+	hypothetical protein	NA	NA	NA	NA
WP_159395774.1\|100515_101058_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

126185 : 214318

Mycobacterium_phage(38.46%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079408290.1\|126185_127028_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_079408473.1\|127065_127284_-	hypothetical protein	NA	NA	NA	NA
WP_079408291.1\|127495_128494_-	hypothetical protein	NA	NA	NA	NA
WP_159395785.1\|129070_129325_-	hypothetical protein	NA	NA	NA	NA
WP_079408292.1\|129366_129876_-	DUF4265 domain-containing protein	NA	NA	NA	NA
WP_159395786.1\|130070_130514_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_079408294.1\|130513_131131_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.0e-13	27.6
WP_107470273.1\|132743_133817_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	3.5e-33	32.8
WP_079408295.1\|135004_135886_+	EamA family transporter	NA	NA	NA	NA
WP_079408297.1\|139414_139753_+	hypothetical protein	NA	NA	NA	NA
WP_079408298.1\|141402_142500_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_159395787.1\|143057_144299_-\|transposase	transposase	NA	NA	NA	NA
WP_159395788.1\|144971_145160_+	hypothetical protein	NA	NA	NA	NA
WP_079408299.1\|145376_146432_+	peptidoglycan DD-metalloendopeptidase family protein	G9FHH0	Rhodococcus_phage	8.5e-24	30.3
WP_159395789.1\|146421_146892_-	hypothetical protein	NA	NA	NA	NA
WP_079408300.1\|147255_147453_+	hypothetical protein	NA	NA	NA	NA
WP_079408301.1\|147529_147778_-\|transposase	transposase	NA	NA	NA	NA
WP_079408302.1\|149799_150102_-\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	1.1e-13	48.5
WP_079408040.1\|151553_152162_+	DDE endonuclease	S5VXX4	Leptospira_phage	2.3e-05	29.4
WP_159395790.1\|152244_152679_+	hypothetical protein	NA	NA	NA	NA
WP_162500729.1\|152894_153116_+	hypothetical protein	NA	NA	NA	NA
WP_079408304.1\|154162_155323_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_079408305.1\|155793_156555_-\|transposase	transposase	NA	NA	NA	NA
WP_079408306.1\|157690_158911_+	MFS transporter	NA	NA	NA	NA
WP_079408307.1\|159477_159801_-\|transposase	transposase	NA	NA	NA	NA
WP_162500731.1\|160855_161002_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_162500730.1\|161191_161614_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_079408476.1\|162231_163047_+	MOSC domain-containing protein	NA	NA	NA	NA
WP_162500732.1\|163108_163901_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	1.0e-21	33.7
WP_079408309.1\|166598_167258_-	enoyl-CoA hydratase	NA	NA	NA	NA
WP_107470275.1\|167542_167974_+\|transposase	transposase	NA	NA	NA	NA
WP_107470276.1\|167808_168084_+\|transposase	transposase	NA	NA	NA	NA
WP_159395791.1\|169200_172146_+	hypothetical protein	NA	NA	NA	NA
WP_079408310.1\|176582_177101_-	kinase	NA	NA	NA	NA
WP_079408479.1\|179923_180793_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_159395792.1\|182978_183527_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_079408314.1\|183966_184542_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_079408480.1\|187147_187798_+	DDE endonuclease	NA	NA	NA	NA
WP_079408315.1\|189020_189896_+	sterol desaturase family protein	NA	NA	NA	NA
WP_159395793.1\|189925_190561_+	lysoplasmalogenase	NA	NA	NA	NA
WP_107470277.1\|191324_192141_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	3.6e-22	34.9
WP_159395794.1\|194657_194882_+	hypothetical protein	NA	NA	NA	NA
WP_159395795.1\|195540_196038_-	sigma-70 family RNA polymerase sigma factor	A0A0F6TH34	Sinorhizobium_phage	1.3e-06	27.9
WP_079408481.1\|199251_199431_-	hypothetical protein	K4NXG4	Streptomyces_phage	3.3e-05	47.7
WP_159395796.1\|201176_202037_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_079408321.1\|202608_202959_-	WhiB family transcriptional regulator	A0A222ZLH8	Mycobacterium_phage	3.0e-10	46.8
WP_030387191.1\|203291_204347_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	5.7e-28	31.4
WP_079404404.1\|204350_206141_-	protein translocase subunit SecD	NA	NA	NA	NA
WP_079408323.1\|208223_209450_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_079408483.1\|211323_212106_-	PIG-L family deacetylase	NA	NA	NA	NA
WP_107470277.1\|212633_213450_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	3.6e-22	34.9
WP_107470278.1\|213501_214318_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	2.0e-20	34.6

DBSCAN-SWA_3

246428 : 313547

Bacillus_phage(28.57%)

transposase,integrase

attL 282155:282170|attR 319307:319322

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_107470277.1\|246428_247245_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	3.6e-22	34.9
WP_159395801.1\|247482_248250_+	hypothetical protein	NA	NA	NA	NA
WP_079408337.1\|250834_251374_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	5.6e-24	42.2
WP_159395802.1\|252149_252449_+\|transposase	transposase	A0A1B3AZF8	Gordonia_phage	6.3e-09	47.1
WP_079408339.1\|252445_253669_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	4.0e-33	32.8
WP_079408340.1\|253816_254020_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_159395803.1\|258121_265360_+	hypothetical protein	NA	NA	NA	NA
WP_079408342.1\|267865_268276_-	hypothetical protein	NA	NA	NA	NA
WP_159395857.1\|268259_269807_-	hypothetical protein	NA	NA	NA	NA
WP_079408486.1\|270385_270799_-	ATP-binding protein	NA	NA	NA	NA
WP_107470281.1\|271877_272198_-	hypothetical protein	NA	NA	NA	NA
WP_159395804.1\|272411_272519_-	hypothetical protein	NA	NA	NA	NA
WP_079408343.1\|272833_273163_-	hypothetical protein	NA	NA	NA	NA
WP_159395805.1\|273338_273581_+\|transposase	transposase	NA	NA	NA	NA
WP_159395806.1\|273658_274090_+	hypothetical protein	NA	NA	NA	NA
WP_159395807.1\|274301_275390_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_079408345.1\|275497_276802_-	MFS transporter	NA	NA	NA	NA
WP_079408346.1\|277061_277622_+	hypothetical protein	NA	NA	NA	NA
WP_079408347.1\|277859_278372_-	ATP-binding protein	NA	NA	NA	NA
WP_159395808.1\|280186_280342_-	hypothetical protein	NA	NA	NA	NA
WP_159395809.1\|280458_280689_-	hypothetical protein	NA	NA	NA	NA
WP_079408348.1\|281276_281699_+	hypothetical protein	NA	NA	NA	NA
282155:282170	attL	NA	NA	NA	NA
WP_079408349.1\|283604_284273_-	hypothetical protein	NA	NA	NA	NA
WP_159395810.1\|285058_287872_+	type 2 lantipeptide synthetase LanM	NA	NA	NA	NA
WP_079408350.1\|288228_290202_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-13	25.5
WP_079408489.1\|290513_291428_-	recombinase family protein	NA	NA	NA	NA
WP_159395812.1\|296188_296500_+\|transposase	transposase	NA	NA	NA	NA
WP_159395813.1\|296540_296861_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_079408354.1\|297145_297850_-	hypothetical protein	NA	NA	NA	NA
WP_079408355.1\|297846_298371_-	SigE family RNA polymerase sigma factor	NA	NA	NA	NA
WP_159395814.1\|298560_299094_-	hypothetical protein	NA	NA	NA	NA
WP_159395815.1\|300617_301934_-	hypothetical protein	NA	NA	NA	NA
WP_079408358.1\|302906_303668_-	hypothetical protein	NA	NA	NA	NA
WP_079408490.1\|303664_304918_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA
WP_079408359.1\|305080_306076_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_079408360.1\|306676_307858_+	hypothetical protein	NA	NA	NA	NA
WP_079408361.1\|309082_309262_+	hypothetical protein	NA	NA	NA	NA
WP_159395816.1\|310393_312004_-	S8 family serine peptidase	A0A2K9L5T6	Tupanvirus	2.6e-16	35.6
WP_159395817.1\|312559_312988_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A0P0I4A4	Acinetobacter_phage	1.5e-11	33.6
WP_159395818.1\|313002_313179_-	hypothetical protein	NA	NA	NA	NA
WP_079408363.1\|313184_313547_-\|transposase	transposase	NA	NA	NA	NA
319307:319322	attR	NA	NA	NA	NA

DBSCAN-SWA_4

331047 : 412985

Mycobacterium_phage(20.0%)

transposase,integrase

attL 371888:371902|attR 413070:413084

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079408374.1\|331047_331572_-\|transposase	transposase	NA	NA	NA	NA
WP_107470277.1\|331972_332789_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	3.6e-22	34.9
WP_079408375.1\|336237_337179_+	EamA family transporter	NA	NA	NA	NA
WP_079408376.1\|337246_338248_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_079408377.1\|338445_338661_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_159395823.1\|339206_340169_-	hypothetical protein	NA	NA	NA	NA
WP_079408378.1\|340196_341240_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_079408379.1\|341409_342534_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_079408380.1\|343364_349043_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	4.7e-177	27.6
WP_159395824.1\|350296_351952_-	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	5.4e-25	33.4
WP_159395825.1\|354408_355017_-	hypothetical protein	NA	NA	NA	NA
WP_159395778.1\|355831_355987_+	hypothetical protein	NA	NA	NA	NA
WP_079408491.1\|356089_357031_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	U5N3F9	Enterobacteria_phage	3.2e-14	28.9
WP_159395826.1\|359478_360495_+	hypothetical protein	NA	NA	NA	NA
WP_159395827.1\|361420_362041_-\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	1.2e-06	22.7
WP_079408385.1\|361965_362505_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_159395828.1\|362714_362975_-	hypothetical protein	NA	NA	NA	NA
WP_159395829.1\|365092_365734_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_079408388.1\|365823_366534_-	transaldolase	A0A0E3FGE1	Synechococcus_phage	6.5e-12	27.1
WP_079408389.1\|366605_367844_-	FAD-binding protein	NA	NA	NA	NA
WP_159395830.1\|367873_369010_-	MFS transporter	NA	NA	NA	NA
WP_079408391.1\|369405_370671_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	4.7e-146	66.2
WP_079408493.1\|370827_371292_-	ATP-binding protein	NA	NA	NA	NA
371888:371902	attL	NA	NA	NA	NA
WP_079408392.1\|373523_373925_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_107470289.1\|375040_375920_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	5.4e-16	39.8
WP_079408393.1\|376130_377285_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_079405015.1\|377514_378660_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_079408495.1\|380833_381703_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_107470290.1\|381994_383647_+\|transposase	ISAzo13 family transposase	NA	NA	NA	NA
WP_079408395.1\|384311_384824_-	ATP-binding protein	NA	NA	NA	NA
WP_107470291.1\|386480_387416_-\|transposase	transposase	NA	NA	NA	NA
WP_079408396.1\|388386_388773_+	hypothetical protein	NA	NA	NA	NA
WP_159395831.1\|388904_389399_+	hypothetical protein	NA	NA	NA	NA
WP_159395832.1\|389532_390036_-	hypothetical protein	NA	NA	NA	NA
WP_079408399.1\|390080_390992_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_159395833.1\|390998_392042_-	cytochrome P450	NA	NA	NA	NA
WP_159395834.1\|392185_392491_-	hypothetical protein	NA	NA	NA	NA
WP_159395835.1\|392630_393500_-	hypothetical protein	NA	NA	NA	NA
WP_159395836.1\|393502_394669_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_159395837.1\|394661_395480_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_079408404.1\|395493_396000_-	hypothetical protein	NA	NA	NA	NA
WP_079408405.1\|395999_397004_-	thymidylate synthase	G3MA60	Bacillus_virus	7.0e-28	28.8
WP_079408406.1\|399523_399904_+	hypothetical protein	NA	NA	NA	NA
WP_079408407.1\|399840_400320_+	hypothetical protein	NA	NA	NA	NA
WP_159395838.1\|403733_405446_+	hypothetical protein	NA	NA	NA	NA
WP_079408408.1\|405834_406044_-\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	5.0e-05	41.5
WP_107470292.1\|407185_407452_-	hypothetical protein	NA	NA	NA	NA
WP_079408410.1\|410075_410516_-	hypothetical protein	NA	NA	NA	NA
WP_079408411.1\|410698_411757_+	hypothetical protein	NA	NA	NA	NA
WP_079408412.1\|411851_412985_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
413070:413084	attR	NA	NA	NA	NA

DBSCAN-SWA_5

429276 : 501669

Mycobacterium_phage(37.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159395840.1\|429276_429900_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_079408426.1\|430216_431317_-	serine hydrolase	A0A2K9L1U3	Tupanvirus	1.2e-09	25.5
WP_079408427.1\|431662_432544_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_079408428.1\|432719_433076_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_159395841.1\|433027_433408_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_079408429.1\|433385_433682_-	hypothetical protein	NA	NA	NA	NA
WP_107470277.1\|437263_438080_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	3.6e-22	34.9
WP_079408431.1\|438536_438719_+	hypothetical protein	NA	NA	NA	NA
WP_079408432.1\|438875_439436_+	SigE family RNA polymerase sigma factor	NA	NA	NA	NA
WP_159395842.1\|439432_440092_+	hypothetical protein	NA	NA	NA	NA
WP_079408434.1\|440655_442395_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
WP_079408435.1\|442409_443603_+	L,D-transpeptidase	NA	NA	NA	NA
WP_079408504.1\|446475_447759_+	MFS transporter	NA	NA	NA	NA
WP_159395843.1\|448939_450670_+	hypothetical protein	NA	NA	NA	NA
WP_159395844.1\|454725_455955_+	hypothetical protein	NA	NA	NA	NA
WP_159395845.1\|456355_456766_-\|transposase	transposase	NA	NA	NA	NA
WP_159395846.1\|458055_458526_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_079408439.1\|459445_459637_-	hypothetical protein	NA	NA	NA	NA
WP_079408440.1\|463325_464096_+\|transposase	transposase	NA	NA	NA	NA
WP_079408441.1\|465453_466653_+	ParA family protein	NA	NA	NA	NA
WP_079408442.1\|466649_467840_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	9.0e-06	29.9
WP_159395847.1\|472894_473236_-	hypothetical protein	NA	NA	NA	NA
WP_079408506.1\|473308_473836_-	hypothetical protein	NA	NA	NA	NA
WP_079408446.1\|475695_477354_+	S8 family serine peptidase	A0A2L0UZX3	Agrobacterium_phage	1.2e-11	27.5
WP_159395848.1\|478439_478691_+	hypothetical protein	NA	NA	NA	NA
WP_159395849.1\|478699_479053_+	hypothetical protein	NA	NA	NA	NA
WP_079408448.1\|479226_479601_-	transcription factor	NA	NA	NA	NA
WP_079408449.1\|479597_481112_-	DNA primase	A0A1D8EQ76	Mycobacterium_phage	7.2e-93	42.8
WP_079408450.1\|481108_482215_-	bifunctional DNA primase/polymerase	NA	NA	NA	NA
WP_159395850.1\|485095_485602_+	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	2.7e-12	39.0
WP_159395851.1\|488420_488618_+	hypothetical protein	NA	NA	NA	NA
WP_079408507.1\|489342_490956_+\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	4.0e-17	26.4
WP_079408452.1\|490966_491761_+	ATP-binding protein	NA	NA	NA	NA
WP_079408453.1\|491826_492276_-	hypothetical protein	NA	NA	NA	NA
WP_079408454.1\|492909_493500_+	hypothetical protein	NA	NA	NA	NA
WP_159395852.1\|494902_495997_+	hypothetical protein	NA	NA	NA	NA
WP_079408508.1\|497908_498439_+\|transposase	transposase	NA	NA	NA	NA
WP_079408456.1\|498738_499194_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_079408457.1\|500195_500792_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_162500733.1\|500875_501669_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	3.6e-19	31.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP020041

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7221 : 66031

Saccharomonospora_phage(75.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162500736.1\|7221_8424_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_079408522.1\|12745_13435_-	hypothetical protein	NA	NA	NA	NA
WP_079408523.1\|13427_13955_-	SigE family RNA polymerase sigma factor	NA	NA	NA	NA
WP_079408524.1\|15182_15476_-	hypothetical protein	NA	NA	NA	NA
WP_079405015.1\|15691_16837_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_107470308.1\|16927_18181_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_079408525.1\|18466_19627_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_159395862.1\|19740_19881_+	hypothetical protein	NA	NA	NA	NA
WP_079408526.1\|20164_20947_+	hypothetical protein	NA	NA	NA	NA
WP_079408527.1\|20949_21237_+	hypothetical protein	NA	NA	NA	NA
WP_159395863.1\|21560_22205_-	hypothetical protein	NA	NA	NA	NA
WP_079408529.1\|22541_24410_+	DEAD/DEAH box helicase family protein	I4AZM6	Saccharomonospora_phage	3.2e-90	42.1
WP_159395864.1\|24406_25030_+	hypothetical protein	I4AZM7	Saccharomonospora_phage	2.7e-22	41.3
WP_107470335.1\|25196_26330_-	methyltransferase domain-containing protein	I4AZP9	Saccharomonospora_phage	7.5e-10	41.8
WP_159395865.1\|27154_27379_-	hypothetical protein	NA	NA	NA	NA
WP_079408532.1\|27977_28250_-	hypothetical protein	NA	NA	NA	NA
WP_162500734.1\|28486_29191_+	hypothetical protein	NA	NA	NA	NA
WP_079408533.1\|30255_30483_-	hypothetical protein	NA	NA	NA	NA
WP_159395866.1\|32757_34113_-	hypothetical protein	NA	NA	NA	NA
WP_107470310.1\|35798_36230_+	hypothetical protein	S5Z5E8	Mycobacterium_phage	1.2e-37	54.3
WP_079408536.1\|36544_36940_+	hypothetical protein	NA	NA	NA	NA
WP_079408537.1\|37971_38463_+	hypothetical protein	NA	NA	NA	NA
WP_079408538.1\|38545_38941_+	hypothetical protein	NA	NA	NA	NA
WP_079408539.1\|38946_39783_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_079408540.1\|39849_40269_-	RacP protein	NA	NA	NA	NA
WP_079408541.1\|40271_41270_-	RacO protein	NA	NA	NA	NA
WP_159395867.1\|42227_42398_-	hypothetical protein	NA	NA	NA	NA
WP_079408543.1\|42511_42970_-	hypothetical protein	NA	NA	NA	NA
WP_079408544.1\|43999_44212_-	hypothetical protein	NA	NA	NA	NA
WP_079408545.1\|44844_45924_-	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA
WP_107470314.1\|45916_47770_-	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA
WP_079408547.1\|47778_49740_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_079408548.1\|52036_53284_-	cytochrome P450	NA	NA	NA	NA
WP_159395868.1\|53349_54564_-	hypothetical protein	NA	NA	NA	NA
WP_159395869.1\|55361_56399_-	hypothetical protein	NA	NA	NA	NA
WP_079408550.1\|57211_57856_-	type 1 glutamine amidotransferase-like domain-containing protein	NA	NA	NA	NA
WP_159395870.1\|61842_62361_+	hypothetical protein	NA	NA	NA	NA
WP_107470315.1\|62612_63323_+	hypothetical protein	NA	NA	NA	NA
WP_079408648.1\|64870_66031_+\|transposase	IS701 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

88638 : 162765

Mycobacterium_phage(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079408572.1\|88638_89394_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_159395871.1\|90892_91441_-	DUF4188 domain-containing protein	NA	NA	NA	NA
WP_079408574.1\|91437_92832_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_079408575.1\|92834_94211_-	cytochrome P450	NA	NA	NA	NA
WP_079408576.1\|94391_95546_-	glycine amidinotransferase	D5GV78	Campylobacter_virus	2.8e-44	31.0
WP_079408652.1\|97318_98188_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_079408577.1\|98362_98704_+	hypothetical protein	NA	NA	NA	NA
WP_159395872.1\|98703_99153_+	hypothetical protein	NA	NA	NA	NA
WP_079408579.1\|99776_100718_-	hypothetical protein	NA	NA	NA	NA
WP_079408580.1\|100736_102911_-	ATP/GTP-binding protein	NA	NA	NA	NA
WP_079408581.1\|102907_103369_-	hypothetical protein	NA	NA	NA	NA
WP_159395873.1\|106249_107152_+	DUF1864 family protein	NA	NA	NA	NA
WP_079408583.1\|107148_108066_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_162500735.1\|108155_108380_+	hypothetical protein	NA	NA	NA	NA
WP_159395874.1\|108649_108901_-	hypothetical protein	NA	NA	NA	NA
WP_162500737.1\|109097_110063_-	C40 family peptidase	A0A222YZS8	Streptomyces_phage	4.1e-25	40.5
WP_079408587.1\|112638_115182_-	ATP/GTP-binding protein	A0A1S5SF64	Streptococcus_phage	1.9e-21	23.7
WP_079408588.1\|115196_115817_-	hypothetical protein	NA	NA	NA	NA
WP_030387976.1\|115813_116098_-	hypothetical protein	NA	NA	NA	NA
WP_079408589.1\|116111_117224_-	hypothetical protein	NA	NA	NA	NA
WP_079408590.1\|117220_117490_-	hypothetical protein	NA	NA	NA	NA
WP_079408591.1\|117540_118476_-	hypothetical protein	NA	NA	NA	NA
WP_159395875.1\|119317_119896_+	hypothetical protein	NA	NA	NA	NA
WP_159395876.1\|120694_120850_-	hypothetical protein	NA	NA	NA	NA
WP_079408593.1\|121704_122568_+	hypothetical protein	NA	NA	NA	NA
WP_079408594.1\|123716_123911_-	hypothetical protein	NA	NA	NA	NA
WP_159395877.1\|124056_124221_+	hypothetical protein	NA	NA	NA	NA
WP_079408654.1\|124469_124673_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	2.1e-16	60.3
WP_107470318.1\|126666_126888_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_079408596.1\|126814_128200_+	helicase	NA	NA	NA	NA
WP_079408597.1\|128209_128500_+	hypothetical protein	NA	NA	NA	NA
WP_079408598.1\|128496_129756_+	hypothetical protein	NA	NA	NA	NA
WP_079408599.1\|129906_131115_-	hypothetical protein	NA	NA	NA	NA
WP_079408601.1\|132997_134413_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_079408602.1\|135425_135776_+	hypothetical protein	NA	NA	NA	NA
WP_079408603.1\|136781_138431_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA
WP_079408604.1\|138479_139076_-	NUDIX hydrolase	NA	NA	NA	NA
WP_107470319.1\|139154_139972_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	3.6e-22	34.8
WP_079408607.1\|140011_140542_-	GTP cyclohydrolase	S4VV34	Pandoravirus	1.4e-22	40.0
WP_159395878.1\|140612_141008_-	VOC family protein	NA	NA	NA	NA
WP_159395879.1\|141041_141611_-	cupin domain-containing protein	NA	NA	NA	NA
WP_079408610.1\|141828_142128_+\|transposase	transposase	NA	NA	NA	NA
WP_107470320.1\|142395_143331_+\|transposase	transposase	NA	NA	NA	NA
WP_159395880.1\|144784_145483_-\|transposase	transposase	NA	NA	NA	NA
WP_079408612.1\|146338_146602_-\|transposase	transposase	NA	NA	NA	NA
WP_079408613.1\|146849_148241_-	hypothetical protein	I4AZE5	Saccharomonospora_phage	4.5e-57	32.6
WP_159395881.1\|148740_148830_+	hypothetical protein	NA	NA	NA	NA
WP_159395882.1\|148842_148986_+	hypothetical protein	NA	NA	NA	NA
WP_159395883.1\|149783_150098_+	hypothetical protein	NA	NA	NA	NA
WP_079408614.1\|150210_151185_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_159395884.1\|153483_154254_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_159395885.1\|155433_155658_+	hypothetical protein	NA	NA	NA	NA
WP_079408616.1\|155896_157483_-	S8 family serine peptidase	A0A217EQY2	Bacillus_phage	2.2e-23	35.4
WP_107470324.1\|157857_158445_-	hypothetical protein	NA	NA	NA	NA
WP_159395886.1\|158809_159721_+	hypothetical protein	NA	NA	NA	NA
WP_079408618.1\|159717_161736_+	hypothetical protein	NA	NA	NA	NA
WP_107470277.1\|161947_162765_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	3.6e-22	34.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage