CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP020085	Glaesserella parasuis strain CL120103 chromosome, complete genome	1 crisprs	PD-DExK,cas3,DEDDh,DinG	2	1	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP020085_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020085_1

1960429-1960693

Orphan

Consensus_repeat	Method
TCCNGTTGGACCCGCAGGGCCT	CRT

4 spacers

The CRISPR arrays of NZ_CP020085_1

>merge|NZ_CP020085|1|1960429-1960693|CRT
TCCAGTTGGACCCGCAGGGTCTTGTGATCCCGTTGGACCCGCAGGGCCTTGTGGTCCCGTTGGACCCGCAGGGCCTTGTGGTCCTGCTGGACCCGTATCACCTTTGTCACCCTTAGGTCCCGTTGGACCCGCAGGGCCTGGAATACCTTGTTCACCTTTAGGACCCGGTTCACCCTTTGGTCCCGCTGGACCCGCAGGGCCAGTTTCACCTCTCTGACCTGTATCACCTTTTGGACCTGCATCTCCTTTAGGACCCGCAGGGCCT

>NZ_CP020085|1|1|1960429-1960693|CRT
TCCAGTTGGACCCGCAGGGTCT	TGTGATCCCGTTGGACCCGCAGGGCCTTGTGG
TCCCGTTGGACCCGCAGGGCCT	TGTGGTCCTGCTGGACCCGTATCACCTTTGTCACCCTTAGG
TCCCGTTGGACCCGCAGGGCCT	GGAATACCTTGTTCACCTTTAGGACCCGGTTCACCCTTTGG
TCCCGCTGGACCCGCAGGGCCA	GTTTCACCTCTCTGACCTGTATCACCTTTTGGACCTGCATC
TCCTTTAGGACCCGCAGGGCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020085.1\|WP_005712971.1\|1970495_1970690_-\|DNA-gyrase-inhibitor-YacG	unknown	unknown	gnl\|CDD\|367713
NZ_CP020085.1\|WP_021112629.1\|1974276_1976424_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|274550
NZ_CP020085.1\|WP_082259431.1\|1966309_1968895_+\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NZ_CP020085.1\|WP_157888973.1\|1951258_1951837_-\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|380293
NZ_CP020085.1\|WP_026916742.1\|1963664_1965596_-\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NZ_CP020085.1\|WP_021112632.1\|1968977_1969472_+\|LPS-assembly-family-protein	unknown	unknown	gnl\|CDD\|225527
NZ_CP020085.1\|WP_021116061.1\|1972901_1974200_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP020085.1\|WP_021110983.1\|1953669_1954785_-\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|235839
NZ_CP020085.1\|WP_005714308.1\|1955089_1955347_+\|phosphocarrier-protein-Hpr	unknown	unknown	gnl\|CDD\|182777
NZ_CP020085.1\|WP_021119187.1\|1971400_1971748_-\|ArsC-family-reductase	unknown	unknown	gnl\|CDD\|239333
NZ_CP020085.1\|WP_021114051.1\|1950735_1951230_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020085.1\|WP_035519783.1\|1957237_1957741_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|181859
NZ_CP020085.1\|WP_043896576.1\|1952032_1952623_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020085.1\|WP_021114055.1\|1948220_1949384_-\|lipid-A-disaccharide-synthase	unknown	unknown	gnl\|CDD\|234580
NZ_CP020085.1\|WP_131401340.1\|1949936_1950470_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020085.1\|WP_021119188.1\|1969476_1970499_+\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235511
NZ_CP020085.1\|WP_082259357.1\|1955442_1957164_+\|phosphoenolpyruvate-protein-phosphotransferase-PtsI	unknown	unknown	gnl\|CDD\|183017
NZ_CP020085.1\|WP_021109763.1\|1957895_1959323_+\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl\|CDD\|237673
NZ_CP020085.1\|WP_082259359.1\|1971761_1972607_-\|dihydropteroate-synthase	unknown	unknown	gnl\|CDD\|183230
NZ_CP020085.1\|WP_010786354.1\|1970693_1971314_-\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620

Protein	Function_ID	Function_description	E-value
NZ_CP020085.1\|WP_082259359.1\|1971761_1972607_-\|dihydropteroate-synthase	gnl\|CDD\|183230	PRK11613, folP, dihydropteroate synthase; Provisional.	3.93943e-132
NZ_CP020085.1\|WP_021112629.1\|1974276_1976424_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|274550	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP020085.1\|WP_021110983.1\|1953669_1954785_-\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|235839	PRK06598, PRK06598, aspartate-semialdehyde dehydrogenase; Reviewed.	0
NZ_CP020085.1\|WP_157888973.1\|1951258_1951837_-\|N-6-DNA-methylase	gnl\|CDD\|380293	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated with PGL (phage growth limitation), a type 2 BREX (bacteriophage exclusion) system. The phage resistance appears not be restriction, but does manage to inhibit phage replication.	1.2416e-07
NZ_CP020085.1\|WP_026916742.1\|1963664_1965596_-\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP020085.1\|WP_021109763.1\|1957895_1959323_+\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl\|CDD\|237673	PRK14325, PRK14325, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NZ_CP020085.1\|WP_021116061.1\|1972901_1974200_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	6.65512e-95
NZ_CP020085.1\|WP_082259431.1\|1966309_1968895_+\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_CP020085.1\|WP_005714308.1\|1955089_1955347_+\|phosphocarrier-protein-Hpr	gnl\|CDD\|182777	PRK10850, PRK10850, phosphocarrier protein Hpr.	5.34085e-39
NZ_CP020085.1\|WP_021119187.1\|1971400_1971748_-\|ArsC-family-reductase	gnl\|CDD\|239333	cd03035, ArsC_Yffb, Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.	1.72932e-50
NZ_CP020085.1\|WP_082259357.1\|1955442_1957164_+\|phosphoenolpyruvate-protein-phosphotransferase-PtsI	gnl\|CDD\|183017	PRK11177, PRK11177, phosphoenolpyruvate-protein phosphotransferase PtsI.	0
NZ_CP020085.1\|WP_005712971.1\|1970495_1970690_-\|DNA-gyrase-inhibitor-YacG	gnl\|CDD\|367713	pfam03884, YacG, DNA gyrase inhibitor YacG. YacG inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. It acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase. YacG has been shown to bind zinc and contains the structural motifs typical of zinc-binding proteins. The conserved four cysteine motif in this protein (-C-X(2)-C-X(15)-C-X(3)-C-) is not found in other zinc-binding proteins with known structures.	2.29167e-18
NZ_CP020085.1\|WP_021114055.1\|1948220_1949384_-\|lipid-A-disaccharide-synthase	gnl\|CDD\|234580	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed.	0
NZ_CP020085.1\|WP_035519783.1\|1957237_1957741_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|181859	PRK09439, PRK09439, PTS system glucose-specific transporter subunit; Provisional.	6.27114e-103
NZ_CP020085.1\|WP_021119188.1\|1969476_1970499_+\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	4.25032e-114
NZ_CP020085.1\|WP_021112632.1\|1968977_1969472_+\|LPS-assembly-family-protein	gnl\|CDD\|225527	COG2980, RlpB, Rare lipoprotein B [Cell envelope biogenesis, outer membrane].	2.12618e-48
NZ_CP020085.1\|WP_010786354.1\|1970693_1971314_-\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	1.98458e-92

>NZ_CP020085.1|WP_021109763.1|1957895_1959323_+|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MAKLHITTWGCQMNEYDSSKMADLLNSTHGLELTENPEDADILLLNTCSIREKAQEKVFSQLGRWKNWKKDKPDLIIGVGGCVASQEGEHIRERAPFVDIVFGPQTLHRLPEMINQIRGGKSSVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYRGETFDGGICSFAELLRLVASIDGIDRVRYTTSHPIEFTDDIIEVYKDTPELVSFLHLPIQSGSDRVLTMMKRNHTALEYKAIIRKLREARPDIQISSDFIVGFPGETAEDFEQTMKIIEQVNFDMSFSFIYSARPGTPAADLPDDVTEDEKKERLYRLQQRINNQAMQFSRAMLGTEQRILVEGPSKKDIMELTGRTESNRIVNFQGTPNMIGKFVDVKITDVYTNSLRGEVVRTEDQMGLRVIESAQSVINRTRKEDDLGVGKFVVNL
>NZ_CP020085.1|WP_035519783.1|1957237_1957741_+|PTS-glucose-transporter-subunit-IIA
MGFFDKLFGGKKEAVAKEVKIYAPLSGEIVNIEDVPDVVFSEKIVGDGIAIRPTGDMIVAPVNGTIGKIFETNHAYSIESEDGVELFVHFGIDTVELKGEGFTRLAEENQEVKVGDPIIKFDLELLQSKAKSVLTPVVISNMDEVTNLQKLSGEVVAGESTVLVLTK
>NZ_CP020085.1|WP_082259357.1|1955442_1957164_+|phosphoenolpyruvate-protein-phosphotransferase-PtsI
MITGIAASPGIVFGKALVLKEEPIVLNTHKIIPTQIEAEKSKFFTGREKAAAQLTAIKEKARRTLGEEKEAIFEGHLMILEDEELEEEILGYIEENLVTADVAASKIIDMQASMLAEIDDEYLKERAGDIRDIGSRLIRNILGMNIVDFGDIQEEAILVAYDLTPSETAQLNLDKVLGFVTDIGGRTSHTSIMARSLELPAVVGTNNITSLVNTGDILILDAINNEVHINPSAEQLEKAKALQARIADEKAELAKLKDLPAETLDGHRIEVVGNIGTIRDVDGVLRNGGEGVGLYRTEFLFMDRNQLPGEEEQFQAYKEIVEAMNGKLVVLRTMDIGGDKELPYLELPKEMNPFLGWRAVRIGLVRREILDTQLRAVLRASAFGKLAVMFPMIISVEEIRELKGIIAELKAQLHLEGKAFDKNLQIGVMVETPSAAVNARHLAKEVDFFSIGTNDLTQYTLAVDRGNEIIAHLYNPLTPSVLNLIKQVIDASHAEGKWTGMCGELAGDVKATALLLGMGLDEFSMSAISVPHVKKLVRSINYADAKALADKALAQPTATDIERLVDEFYQNLN
>NZ_CP020085.1|WP_005714308.1|1955089_1955347_+|phosphocarrier-protein-Hpr
MYSKDVTITCPNGLHTRPAAEFVKAAKGFASDITVTSNGKSASAKSLFKLQTLGLAQGTIITLSAEGEDEQKAVDFLVDLIPTLE
>NZ_CP020085.1|WP_021110983.1|1953669_1954785_-|aspartate-semialdehyde-dehydrogenase
MQNVGFIGWRGMVGSVLMERMIQENDFANINPVFFTTSQAGQKAPVFAGKEAGALKDAFDIAELQKLDIIVTCQGGDYTNEVYPKLKATGWNGYWIDAASALRMQDDAIIVLDPVNQHVITEGLQKGIKTFVGGNCTVSLMLMAIGGLFEKDLVEWVSVATYQAASGAGAKNMRELLVQMGELEDAVKAELADPASSILEIERKVTAEIRSEDFPTANFGAPLAGSLIPWIDKLLPETGQTKEEWKGYAETNKILGLSANPIPVDGLCVRIGALRCHSQAFTIKLKKDLPLAEIEQIIAAHNEWVKVIPNDRETTLRELTPAKVTGTLTVPVGRLRKLAMGPEYLAAFTVGDQLLWGAAEPVRRILVQLVK
>NZ_CP020085.1|WP_043896576.1|1952032_1952623_-|hypothetical-protein
MKQIHNESGNNYQGLVTNGKKIAYLYFIGDEIKNTAFSTIEVKDLDRIMQSLINVGSKQFSPKNIVSDFKSTSHITQNLSNSLYDAICTHKTQKTEMLMEEWKVLFRLSESDKGQNQDIEKRRKKLSEIFSDNINNNEKEYMALYVLQTSYAIIVKLIACKVIQTLLFSEDVKFFSDLSVIDSIKLQRFMEKLEDG
>NZ_CP020085.1|WP_157888973.1|1951258_1951837_-|N-6-DNA-methylase
MPNEIRPSLGEYFTPSWMADHVVSRSLEKLNKESWKAIDPCCGSGVFLISLIKSILDKHELYSLTIKEKQELLLRILSSVYGIDLNPLSVLTAKVSYFLAIRPLIDDQKIEIPVYLGDSANIPQKIELDNIACYTYTVDTKQGDFNIIFPCNFVESSSFFERMYRLQTTVEAEDPKLLYHQIIENIDQEFVY
>NZ_CP020085.1|WP_021114051.1|1950735_1951230_-|hypothetical-protein
MGAISLNLCALIANVTSDKWLTNKGLLAFLMPKTIMTQDSYAGFRNFYLSDGSRMYLSEIDDWSNAGNPFIVTTEKFMTYFYEKNPVDYSNGIPINFFYKKSNVKITEVNRFHTFEKVKDFFQIKDGMAYQLSENRTGFTLLPERDYTILRKLKLISGTSDYKA
>NZ_CP020085.1|WP_131401340.1|1949936_1950470_-|hypothetical-protein
MVKECELLSNYLIINKNLIEKQSKRSLMISMGNDFYSLSKVGNYKFSPYKVVFRDNTTMCASVVIEQETPWGEKILPIPAKHAPYISMNKNGAEITEEAYYLCGILNTDIINKYFKFTFSGRSYSINFEIKLPKFNRKNSIQYEIAKLAQELTVKKINYEEGISRIEELYLELCDSI
>NZ_CP020085.1|WP_021114055.1|1948220_1949384_-|lipid-A-disaccharide-synthase
MIISSPLIAIVAGEISGDILGAGLIKALKVHYPNARFIGVAGEKMLKEGCETLFDMEELAVMGLAEVVKHLPPLLKRRKQVIDTMLALKPDIFIGIDAPDFNLGVEEKLKNQGIKTIHYVSPSVWAWRQNRVYKIARATDLVLAFLPFEKAFYDRFNIPCRFIGHTMADAIALKPNRQEVCRLLKLDENQRYVAILVGSRGSEVNFLAEPFLKTAQLLKTQYPDIQFLVPLVNEKRREQFEAIKAQVAPELDVISLAGNARAAMMVAEATLLASGTAALEAMLCKSPMVVGYKMKPLTYWLAKRLVKTDYISLPNLLANEPLVPELIQADCSPENLAKHLSIYLSQMPEDVARKNALKQRFMELHQYIQCDADAQAAQAVVNVLNRE
>NZ_CP020085.1|WP_026916742.1|1963664_1965596_-|threonine--tRNA-ligase
MPIITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISEDATLEIITAKDEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDLDALEARMLELAKTNYDVVKKRVSWQEARDTFESRGESYKMAILDENISKDYRPALYHHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLADYLHRLEEAAKRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPEQVESEVTSCIKMVYDIYSTFGFENIQVKLSTRPANSIGTDEMWNKAEADLAAALTANGLSFEIQEGEGAFYGPKIEFALRDCLDREWQCGTIQLDFFLPERLSASYVAEDNNRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPVQAVVMNITDSQAEYVQQVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTRKGADLGTYKVEEFVEMLKKQVRGRELKLLGEE
>NZ_CP020085.1|WP_082259431.1|1966309_1968895_+|leucine--tRNA-ligase
MQQQYNPSAIEPRVQQYWAENKVFKAIKDESKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPMGWDAFGLPAEGAAVKNKTAPAKWTYENIEYMKNQLKALGFGFDWDREVTTCRPEYYKWEQWFFTELYKKGLVYKKTSTVNWCPNDETVLANEQVHEGCCWRCDTPVEQKEIPQWFIKITDYAEQLLNDLDRLPLWPDQVKTMQRNWIGRSEGVEITFKVKGTDQALPVYTTRPDTFFGVSYVAVAAAHPLATLAAENNPALAAFIQEAKNTKVAEADIATMEKKGMATGLFAIHPLTGEEVPVWVANFVLMHYGTGAVMAVPAHDERDFEFAQKYNLPIKQVIAPLDGSEWDFSKAAMTEHGKLINSAEFDGLDFDGAFKGIADKLEGMGIGKRQVNYRLRDWGVSRQRYWGAPIPMLTLENGETVTVPMQDLPVVLPEDVVMDGVKSPIKADPEWAKTTYNGQPALRETDTFDTFMESSWYYARYASPQYQQGMLDKEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSDEPTEKLLCQGMVLADAYYYTSPTNERIWVSPTEVTVERDEKGRILKAFDKEGRALVHSGMTKMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGAKRFLGRLWNLAYEYAQSPATVALDPTALSKEQKDLRRDVHKTIAKVSDDIGRRQTFNTAIAAIMELMNKLTKAPLVNDQDKAVMAEALNAVIRMLYPITPHICFELWQALGNEGSIDFAPWVVADEKAMVEDEKLVVVQVNGKVRGKITVSTTATEDEVKAIAKADENVAKYLEGVEIVKEIYVPFKMLSFAVKA
>NZ_CP020085.1|WP_021112632.1|1968977_1969472_+|LPS-assembly-family-protein
MLKKLSLICVLFLTACGWHFKNNEQFPEELRTLSFESADQYSDMSRILRNKMLLSNIQIVPKSTNVANLRLNATESESRVASVFKQAREAEKILSLTVKATVTIPNKGIYPIETSVHRTFFDDSRAALAKSEEQESIQRQMYEQASRQLLIKVAGLQKELANTK
>NZ_CP020085.1|WP_021119188.1|1969476_1970499_+|DNA-polymerase-III-subunit-delta
MQRIFPEGLEPALNKGLQPFYLLTGQDLLLVGEAKDCIVQTARLQDFDEKQEFTIANDTQWDMLFDLVQSNGLFFNRQILILNLPENLTVTQQKQLSELLAFSHTDLLFVLHQPKLTKAMEKQSWFVQLNNAVVVNCQTPDITKLPIWLQHRAKTMQLQLEPDAIQLLCYSYEGNLLALKQALQMLQLRFAEQKIGLNRAKEVIEQSAQFTPFQWVDALLEGKINRALRVLQHLQNEEIQPVVLLRIVQKELLLLLEMTRSPQPIINSHQPLYSGNLRAEFDRLKVWQNRRGFYQAAVQRLTYHKLYQLIQSLAELEKQVKQEFSDEAWQGIERFSLLFH
>NZ_CP020085.1|WP_005712971.1|1970495_1970690_-|DNA-gyrase-inhibitor-YacG
MLVVFCPNCGKEVAWVLGNKYRPFCSERCHLVDLGEWLNEENQVLESDIQSADDYDMVVSEGIF
>NZ_CP020085.1|WP_010786354.1|1970693_1971314_-|dephospho-CoA-kinase
MSYIVALTGGIGSGKSTIANLFAALGVPVIDADIIARNIVEKGSPLLAQIVAHFGKQILFENGELNRTALRQRIFQTEYERLWLNQLLHPAIHTEMLKQLNESQSPYVLWVVPLLIENQLMALCDRILVVDVLPEIQLERAMKRDKSNVEMIKSIMLSQVDRQTRLNYANDVIENNLPFGDNEVHLTHQVAKLNEYYLTLSKTKGK
>NZ_CP020085.1|WP_021119187.1|1971400_1971748_-|ArsC-family-reductase
MTILYGIKNCDTVKKAIKWLADNDLNPQLHDYRVDGLDPVWLAEMAEKFGWENLVNKRSTTWRGLDDEIKNNLTKELALKVLNEQPTLIKRPIVIADDAALIGFDEKEYQKVFMK
>NZ_CP020085.1|WP_082259359.1|1971761_1972607_-|dihydropteroate-synthase
MQIYYPNYQGSDRLLDLTSPKIMGILNFTPDSFSDSGKFFTLDKALFQVEKMLNDGADIIDIGGESTRENAEIVTLEQELERVVPLVEAVRKRFDCLISVDSSKAEVFRQSAQVGADILNDIRALQEPNALETAVELGLPVCLMHMQGTPQNMQQNPEYNDVVEEVADFLNQRIFACTMAGIPKEHIILDVGFGFGKTVQHNYQLLKHLNAFVASGYPVLAGLSRKSMIGNVINKPVDQRVAGSIAGALLAVQNGAKIVRVHDVAETADALKVWQAMNECE
>NZ_CP020085.1|WP_021116061.1|1972901_1974200_-|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MDKDKNPKLLDEKLETTNSEPKEIGKQKAAKLRNKDLYLLNDLHAALQQEDHRSIFATISLFFTLLVVFVIWAYNSPIDEVTRGQGSIIPTSREQVIQSLDPGILKEMLVKEGDTVDKDQVLLKLDDTRSSAILRESQAKVENLEALSARLKAEAYGVELVFAETTPVQLQERERAIYEKKKNSLKESLDSLQASKALLDREIQMTEPMVARGAVSEIELLRMKRQSSDLQLQLAERKNKYATDASAELTKIEAELSQARENMAMRADPVERSHIRSPLKGIVKNIRVNTIGGVIKAGQDIMEIVPIEDTLLVEAYISPSDVAYVRPGMPALVKLTAYDYAIYGGLDGIVTLLSPDTLHDQKRPSDLKLNPNEAYYRVLVKTDGSHLTDKDGKVMPIIPGMIASVDIKTGQKTVFQYLIKPITRMKQALQER
>NZ_CP020085.1|WP_021112629.1|1974276_1976424_-|type-I-secretion-system-permease/ATPase
MKHIIENLSLATQLLGANLSVATLTAHTIRTENMGLDFSSLREYLKSEGFENTLSKRSLREIPSLAVPVLLFLQNEEAALVTEIKEDSDGRSYKVHLLDGLTQWFSENELEEKYLNHCWFIKPRESVDTRSDLPEYNLPKAWFFKVIWRFKSYYYQVVLSSFIVNFLALVSSLYVMNVYDRVVSNKAYGTLWVLSLGVIAAIVFELIAKMLRAYLTDMAGKKSDLIISSALFRRVLNIKLQDRPTSSGSYANNLRDFESVREFMTSASLLTLVDFPFLFLFLFVMFMVAGKLALVPLAIIPIVIIVGLLAQIPLSRYINESMRESSQRQGLTVEAIEGLETLKTNNAANWAQKRWDFFTAKSASSSIKVKNISNFVTNFTMMMQQLNTVFLVLAGTYLIHSDNPDSKITMGALIACVILSGRALAPLGQIAGLAIRFQQAWLALKGVNSIVERPSERDNERNYVTLKSIRGELQFNNITFSYGKEDEPTINGLNLDIKPGEKVGILGKIGSGKSTVLKLASGLYDPKQGNITVDSVDLRQIDPHFLRNQVLLLEQSPRLFLGTLRENLDLARMDGFSTDQDLLQALARFGLIDLIRNHPRGLDMPLGEGGLGLSGGQKQMVALARMTMKNPRIALLDEPTTGLDQMSEIQALQGIAQWARNKTLVVVTHRSQVLQIVNRIVVIEDGKVVLDGPRDAVLKHLARDESEDTSREQEK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP020085_1	1.2\|1960505\|41\|NZ_CP020085\|CRT	1960505-1960545	41	NZ_CP020085.1	1580096-1580136	1	0.976
NZ_CP020085_1	1.2\|1960505\|41\|NZ_CP020085\|CRT	1960505-1960545	41	NZ_CP020085.1	409725-409765	2	0.951
NZ_CP020085_1	1.4\|1960631\|41\|NZ_CP020085\|CRT	1960631-1960671	41	NZ_CP020085.1	409581-409621	2	0.951

1. spacer 1.2|1960505|41|NZ_CP020085|CRT matches to position: 1580096-1580136, mismatch: 1, identity: 0.976

tgtggtcctgctggacccgtatcacctttgtcacccttagg	CRISPR spacer
tgtgatcctgctggacccgtatcacctttgtcacccttagg	Protospacer
****.************************************

2. spacer 1.2|1960505|41|NZ_CP020085|CRT matches to position: 409725-409765, mismatch: 2, identity: 0.951

tgtggtcctgctggacccgtatcacctttgtcacccttagg	CRISPR spacer
tgtggtcccactggacccgtatcacctttgtcacccttagg	Protospacer
********..*******************************

3. spacer 1.4|1960631|41|NZ_CP020085|CRT matches to position: 409581-409621, mismatch: 2, identity: 0.951

gtttcacctctctgacctgtatcaccttttggacctgcatc	CRISPR spacer
gtttcacctctaagacctgtatcaccttttggacctgcatc	Protospacer
***********  ****************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP020085_1	1.1\|1960451\|32\|NZ_CP020085\|CRT	1960451-1960482	32	NZ_CP041197	Pseudarthrobacter sp. NIBRBAC000502770 plasmid pMK-1, complete sequence	33603-33634	10	0.688

1. spacer 1.1|1960451|32|NZ_CP020085|CRT matches to NZ_CP041197 (Pseudarthrobacter sp. NIBRBAC000502770 plasmid pMK-1, complete sequence) position: , mismatch: 10, identity: 0.688

tgtgatcccgttggacccgcagggccttgtgg	CRISPR spacer
cgtgatcccgttggagccggagggcaacccac	Protospacer
.************** *** *****  . ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

859783 : 913031

Bacillus_phage(11.76%)

tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_106381554.1\|859783_860606_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.1e-13	34.2
WP_021114059.1\|860647_860989_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_035494232.1\|862570_862969_+	MliC family protein	NA	NA	NA	NA
WP_021114060.1\|862977_864030_+	lipopolysaccharide heptosyltransferase II	NA	NA	NA	NA
WP_021114061.1\|864125_864713_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_082259123.1\|864883_866542_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	4.5e-80	35.1
WP_082259124.1\|866672_867680_+	rRNA methyltransferase	NA	NA	NA	NA
WP_082259125.1\|867882_868866_+	octaprenyl diphosphate synthase	A0A1V0SE37	Indivirus	1.0e-07	23.3
WP_021119219.1\|868867_869347_+	hypothetical protein	NA	NA	NA	NA
WP_043896724.1\|869371_869725_+	hypothetical protein	NA	NA	NA	NA
WP_021119221.1\|869726_870470_+	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_082259126.1\|870552_871488_+	ACP S-malonyltransferase	NA	NA	NA	NA
WP_010786301.1\|871626_872352_+	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	1.4e-14	31.4
WP_021119225.1\|872467_873754_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_021112752.1\|873810_874635_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	G3MA33	Bacillus_virus	2.5e-31	33.0
WP_021112732.1\|874908_875349_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA
WP_106379919.1\|875348_875879_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_005713118.1\|876184_876514_-	cell division protein ZapA	NA	NA	NA	NA
WP_021114066.1\|876588_877134_+	UPF0149 family protein	NA	NA	NA	NA
WP_082259127.1\|877158_878940_-	anaerobic ribonucleoside-triphosphate reductase	A0A060AN10	Cronobacter_phage	6.7e-207	59.1
WP_082259128.1\|878936_879407_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	NA	NA	NA
WP_043896273.1\|879581_880145_-	anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.5e-27	35.6
WP_082259129.1\|880144_881761_-	DNA recombination protein RmuC	NA	NA	NA	NA
WP_021112748.1\|881940_882963_+	porphobilinogen synthase	NA	NA	NA	NA
WP_035524442.1\|883171_883753_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_021112760.1\|883759_884971_+	anaerobic sulfatase maturase	A0A1B2IC15	Erwinia_phage	4.1e-06	28.4
WP_035524439.1\|885237_888144_-	RNA polymerase-associated protein RapA	A0A1B1IUI1	uncultured_Mediterranean_phage	3.7e-21	37.5
WP_035489990.1\|888220_889864_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_010786182.1\|889882_890143_-	accessory factor UbiK family protein	NA	NA	NA	NA
WP_021114075.1\|890827_891646_-	shikimate dehydrogenase	NA	NA	NA	NA
WP_021112761.1\|891649_892204_-	Sua5/YciO/YrdC/YwlC family protein	NA	NA	NA	NA
WP_021112716.1\|892203_892734_-	topoisomerase DNA-binding C4 zinc finger domain-containing protein	NA	NA	NA	NA
WP_021114076.1\|892741_893047_-	ASCH domain-containing protein	NA	NA	NA	NA
WP_005713086.1\|893039_893495_-	recombination regulator RecX	NA	NA	NA	NA
WP_080651487.1\|893547_894669_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	2.8e-110	58.8
WP_021114078.1\|894798_895404_-	aminotransferase class IV	NA	NA	NA	NA
WP_021114079.1\|895381_896353_-	aminodeoxychorismate synthase component I	A0A0B5J984	Pandoravirus	2.3e-12	31.3
WP_021112759.1\|896385_896583_+	cation transporter	NA	NA	NA	NA
WP_082259130.1\|896803_897667_+	SAM-dependent methyltransferase TehB	NA	NA	NA	NA
WP_021116197.1\|897781_898753_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_082259131.1\|899876_901733_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	7.6e-36	35.7
WP_021112720.1\|901831_903580_-	DNA primase	A0A1S5RG24	Helicobacter_phage	1.3e-45	32.7
WP_005712190.1\|903723_903939_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_052317703.1\|904108_904513_-	hypothetical protein	NA	NA	NA	NA
WP_021114232.1\|905891_906539_-	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.1e-13	30.2
WP_106379859.1\|907086_907392_-\|transposase	transposase	Q716C2	Shigella_phage	4.0e-27	57.7
WP_071610673.1\|907446_907872_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	8.4e-07	28.8
WP_021118421.1\|907910_908234_-\|transposase	transposase	Q716C1	Shigella_phage	3.7e-15	44.9
WP_082259132.1\|908286_909552_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_021114409.1\|909558_910419_-	pyridoxal kinase PdxY	NA	NA	NA	NA
WP_021114408.1\|910504_911458_-	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_082259133.1\|911972_912635_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_082259134.1\|912650_913031_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1183069 : 1192197

uncultured_virus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010785899.1\|1183069_1183453_+	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	3.8e-51	76.6
WP_010785898.1\|1183613_1183937_+	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	8.3e-23	45.8
WP_082259176.1\|1183946_1184468_+	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA
WP_005714644.1\|1184522_1185542_+	virulence RhuM family protein	Q9JMN3	Wolbachia_phage	5.2e-95	53.5
WP_082259177.1\|1185647_1186283_+	DUF2625 family protein	NA	NA	NA	NA
WP_082259178.1\|1186452_1188309_+	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	2.4e-106	43.2
WP_010785894.1\|1188403_1188745_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_010785893.1\|1188744_1188939_+	Fe-S cluster assembly protein IscX	NA	NA	NA	NA
WP_082259179.1\|1189071_1190280_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.1e-49	47.6
WP_071610098.1\|1190346_1192197_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.5e-33	29.1

DBSCAN-SWA_3

1450922 : 1463907

Mannheimia_phage(72.73%)

tail,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021113519.1\|1450922_1451393_+	DUF4102 domain-containing protein	G9L697	Escherichia_phage	1.0e-37	53.9
WP_082259215.1\|1452477_1453713_+\|terminase	PBSX family phage terminase large subunit	A0A0M3LTA2	Mannheimia_phage	1.0e-193	79.2
WP_082259216.1\|1453722_1455120_+	DUF4055 domain-containing protein	A0A0M3LQA1	Mannheimia_phage	3.8e-165	64.8
WP_021113613.1\|1455076_1456726_+\|capsid	minor capsid protein	A0A0M3LQ07	Mannheimia_phage	1.9e-200	64.6
WP_021111144.1\|1456725_1456944_+	hypothetical protein	A0A0M3LPI7	Mannheimia_phage	1.9e-26	75.0
WP_021113612.1\|1456943_1457363_+	HD domain-containing protein	D0UIJ3	Aggregatibacter_phage	7.4e-40	63.2
WP_082259217.1\|1457484_1461135_+	tape measure protein	A0A0M3LS69	Mannheimia_phage	2.4e-134	35.8
WP_082259218.1\|1461167_1461881_+\|tail	phage minor tail protein L	A0A0M3LSQ5	Mannheimia_phage	8.4e-68	55.5
WP_021113608.1\|1461877_1462291_-	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PH90	Moraxella_phage	7.1e-35	53.7
WP_021113607.1\|1462337_1462514_-	type II toxin-antitoxin system HicA family toxin	A0A0M3LQ86	Mannheimia_phage	8.5e-14	63.2
WP_082259425.1\|1463208_1463907_+	hypothetical protein	A0A0M3LQ61	Mannheimia_phage	4.9e-52	51.8

DBSCAN-SWA_4

1535916 : 1543093

uncultured_Mediterranean_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082259249.1\|1535916_1538745_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	5.0e-305	56.0
WP_021113523.1\|1539047_1539590_+	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	4.2e-43	55.7
WP_082259251.1\|1539750_1541238_-	DUF853 domain-containing protein	A0A248XCZ8	Klebsiella_phage	1.1e-82	45.0
WP_026916465.1\|1541247_1542468_-	ATP-dependent RNA helicase RhlB	E3T5E1	Cafeteria_roenbergensis_virus	9.7e-40	31.1
WP_005712616.1\|1542531_1542804_-	HigA family addiction module antidote protein	A0A2P1MXE5	Escherichia_phage	2.2e-08	42.5
WP_005712614.1\|1542814_1543093_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A0M3LQB1	Mannheimia_phage	5.3e-18	50.0

DBSCAN-SWA_5

1754965 : 1763085

Ostreococcus_lucimarinus_virus(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021113652.1\|1754965_1756228_-	inorganic phosphate transporter	E5ES24	Ostreococcus_lucimarinus_virus	2.5e-59	35.5
WP_021113653.1\|1756247_1756928_-	TIGR00153 family protein	NA	NA	NA	NA
WP_021112442.1\|1757237_1758221_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	7.1e-33	38.0
WP_021113654.1\|1758376_1760764_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	1.4e-05	29.9
WP_021113655.1\|1760780_1761077_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	1.2e-12	41.1
WP_021113656.1\|1761128_1761641_+	C40 family peptidase	A0A0K2SUC1	Clostridium_phage	4.1e-16	40.0
WP_021113657.1\|1761830_1762484_+	uridine kinase	A0A1V0SAA3	Catovirus	1.1e-34	37.0
WP_005710639.1\|1762500_1763085_+	dCTP deaminase	I4AZP2	Saccharomonospora_phage	2.2e-29	40.5

DBSCAN-SWA_6

2036576 : 2206518

169

Haemophilus_phage(49.49%)

plate,tRNA,transposase,head,protease,tail,capsid,holin,terminase,integrase

attL 2138664:2138692|attR 2204887:2204915

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021114518.1\|2036576_2037827_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	8.3e-119	53.9
WP_005711766.1\|2037833_2038415_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.9e-62	62.9
WP_010787002.1\|2038515_2038905_+	SufE family protein	NA	NA	NA	NA
WP_015940024.1\|2040117_2040738_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_021114514.1\|2040907_2041927_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_021113155.1\|2042003_2043002_+	biotin synthase BioB	NA	NA	NA	NA
WP_082259365.1\|2043130_2045470_-	hypothetical protein	NA	NA	NA	NA
WP_021113178.1\|2048241_2049276_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FAD3	Synechococcus_phage	6.5e-69	41.0
WP_021113163.1\|2049463_2050411_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
WP_005713875.1\|2050412_2050697_+	hypothetical protein	NA	NA	NA	NA
WP_021114413.1\|2051421_2054238_+\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	6.1e-77	26.2
WP_021114412.1\|2054742_2056110_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_021114411.1\|2056247_2057186_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_021113949.1\|2058943_2060035_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_021113950.1\|2060131_2060716_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_021112506.1\|2061025_2061925_-	DUF3298 and DUF4163 domain-containing protein	NA	NA	NA	NA
WP_082259366.1\|2062042_2063878_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_021111109.1\|2064160_2064415_+	oxaloacetate decarboxylase subunit gamma	NA	NA	NA	NA
WP_082259367.1\|2064427_2066233_+	sodium-extruding oxaloacetate decarboxylase subunit alpha	NA	NA	NA	NA
WP_082259368.1\|2066241_2067546_+	sodium ion-translocating decarboxylase subunit beta	NA	NA	NA	NA
WP_005712406.1\|2067670_2067991_+	alkylphosphonate utilization protein	NA	NA	NA	NA
WP_082259432.1\|2068066_2068708_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	2.5e-26	37.4
WP_035521965.1\|2068894_2070322_+	aspartate ammonia-lyase	NA	NA	NA	NA
WP_005712400.1\|2070372_2070576_-	hypothetical protein	NA	NA	NA	NA
WP_082259369.1\|2070600_2072487_+	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	6.6e-112	35.4
WP_021113958.1\|2072677_2074117_-	serine-type D-Ala-D-Ala carboxypeptidase	NA	NA	NA	NA
WP_005712395.1\|2074236_2074713_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_016057747.1\|2075345_2076065_-	helix-turn-helix domain-containing protein	F6MII3	Haemophilus_phage	3.2e-131	100.0
WP_005822937.1\|2076260_2076530_+	transcriptional regulator	F6MII4	Haemophilus_phage	7.6e-46	100.0
WP_082259370.1\|2076539_2078516_+\|transposase	Mu transposase C-terminal domain-containing protein	F6MII5	Haemophilus_phage	0.0e+00	99.4
WP_016057749.1\|2078525_2078948_+	hypothetical protein	F6MII6	Haemophilus_phage	1.5e-69	100.0
WP_016057750.1\|2079031_2079913_+	AAA family ATPase	F6MII7	Haemophilus_phage	8.0e-161	100.0
WP_005711959.1\|2079920_2080112_+	hypothetical protein	F6MII8	Haemophilus_phage	3.9e-28	100.0
WP_035494590.1\|2080113_2080407_+	hypothetical protein	F6MII9	Haemophilus_phage	6.1e-49	95.9
WP_042905508.1\|2080418_2080943_+	host-nuclease inhibitor Gam family protein	F6MIJ0	Haemophilus_phage	9.8e-90	99.4
WP_157833079.1\|2081242_2081434_+	ANR family transcriptional regulator	F6MIJ1	Haemophilus_phage	1.5e-24	85.5
WP_173479957.1\|2081444_2081618_+	hypothetical protein	F6MIJ2	Haemophilus_phage	2.6e-23	98.2
WP_082259371.1\|2081632_2081944_+	hypothetical protein	F6MIJ3	Haemophilus_phage	4.5e-50	94.2
WP_035494643.1\|2081936_2082524_+	DUF5420 family protein	A0A0M3LP85	Mannheimia_phage	8.2e-61	57.3
WP_016057756.1\|2082525_2082903_+	hypothetical protein	F6MIJ4	Haemophilus_phage	1.4e-66	100.0
WP_082259372.1\|2083069_2083633_+	hypothetical protein	F6MIJ5	Haemophilus_phage	1.5e-96	95.2
WP_082259373.1\|2083613_2084036_+	regulatory protein GemA	F6MIJ6	Haemophilus_phage	4.3e-72	97.1
WP_082259374.1\|2084136_2084577_+	hypothetical protein	NA	NA	NA	NA
WP_035494654.1\|2084760_2085441_+	hypothetical protein	NA	NA	NA	NA
WP_005711943.1\|2085579_2086005_+	hypothetical protein	F6MIJ8	Haemophilus_phage	1.1e-75	100.0
WP_082259375.1\|2086083_2086626_+	N-acetylmuramoyl-L-alanine amidase	F6MIJ9	Haemophilus_phage	1.1e-104	98.9
WP_005711941.1\|2086764_2086995_+	DUF2644 domain-containing protein	F6MIK0	Haemophilus_phage	1.1e-34	100.0
WP_035491006.1\|2086991_2087345_+	DUF2681 domain-containing protein	F6MIK1	Haemophilus_phage	5.6e-49	94.9
WP_082259376.1\|2087507_2087768_+	hypothetical protein	F6MIK4	Haemophilus_phage	1.8e-12	95.1
WP_016528480.1\|2087764_2088019_+	hypothetical protein	F6MIK5	Haemophilus_phage	4.7e-21	97.6
WP_005711932.1\|2088019_2088529_+	DUF1804 family protein	F6MIK6	Haemophilus_phage	3.6e-89	100.0
WP_035512043.1\|2088631_2090248_+\|terminase	phage terminase large subunit	B7SDN0	Haemophilus_phage	0.0e+00	98.9
WP_082259377.1\|2090334_2091960_+	DUF935 domain-containing protein	B7SDN1	Haemophilus_phage	6.0e-311	96.4
WP_035522915.1\|2091946_2093269_+\|capsid	minor capsid protein	B7SDN5	Haemophilus_phage	2.5e-182	76.2
WP_016057769.1\|2093410_2093827_+	phage virion morphogenesis protein	B7SDN8	Haemophilus_phage	1.9e-72	100.0
WP_082259433.1\|2094065_2095142_+\|protease	phage protease	B7SDN9	Haemophilus_phage	3.2e-196	98.0
WP_082259378.1\|2095141_2096065_+\|head	Mu-like prophage major head subunit gpT family protein	B7SDP1	Haemophilus_phage	1.8e-171	97.7
WP_082259379.1\|2096120_2096474_+	transcriptional regulator	B7SDP3	Haemophilus_phage	1.6e-51	89.7
WP_051617433.1\|2096476_2096953_+	DUF1320 domain-containing protein	B7SDP4	Haemophilus_phage	1.9e-79	95.6
WP_005711909.1\|2097585_2097765_+	DUF2635 domain-containing protein	B7SDP7	Haemophilus_phage	1.4e-24	93.2
WP_157888992.1\|2097773_2099189_+\|tail	phage tail sheath subtilisin-like domain-containing protein	B7SDP8	Haemophilus_phage	7.1e-252	98.1
WP_005711906.1\|2099198_2099573_+\|tail	phage tail protein	F6MIK8	Haemophilus_phage	7.3e-63	99.2
WP_005711904.1\|2099572_2099929_+	hypothetical protein	F6MIK9	Haemophilus_phage	1.9e-60	100.0
WP_020997281.1\|2099958_2100153_+	hypothetical protein	F6MIL0	Haemophilus_phage	6.7e-20	100.0
WP_082259381.1\|2100198_2102562_+\|tail	phage tail tape measure protein	F6MIL1	Haemophilus_phage	0.0e+00	94.9
WP_082259382.1\|2102562_2103918_+	DNA circularization N-terminal domain-containing protein	F6MIL2	Haemophilus_phage	2.4e-249	95.8
WP_005711897.1\|2103922_2105047_+	hypothetical protein	F6MIL3	Haemophilus_phage	4.2e-199	97.3
WP_005711896.1\|2105043_2105694_+\|plate	phage baseplate assembly protein V	F6MIL4	Haemophilus_phage	2.5e-95	86.1
WP_021115447.1\|2105798_2106149_+	phage GP46 family protein	F6MIL5	Haemophilus_phage	1.2e-59	99.1
WP_082259383.1\|2106160_2107222_+\|plate	baseplate J/gp47 family protein	F6MIL6	Haemophilus_phage	3.4e-190	96.6
WP_078208787.1\|2107218_2107797_+	DUF2313 domain-containing protein	F6MIL7	Haemophilus_phage	2.6e-107	97.9
WP_082259384.1\|2109879_2110446_+	DUF4376 domain-containing protein	F6MIL9	Haemophilus_phage	1.6e-98	92.6
WP_026916661.1\|2110438_2110906_+	hypothetical protein	F6MIM0	Haemophilus_phage	6.0e-91	100.0
WP_016057790.1\|2111055_2111169_+	Com family DNA-binding transcriptional regulator	F6MIM1	Haemophilus_phage	9.2e-14	100.0
WP_005714585.1\|2111223_2112057_+	hypothetical protein	F6MIM2	Haemophilus_phage	6.2e-163	100.0
WP_005714586.1\|2112097_2112358_-	hypothetical protein	F6MIM3	Haemophilus_phage	1.6e-40	97.7
WP_078208690.1\|2113524_2113692_-	dihydrofolate reductase	NA	NA	NA	NA
WP_016527528.1\|2113828_2114635_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-20	34.3
WP_021113961.1\|2114638_2116594_-	dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein	G9BWD6	Planktothrix_phage	9.5e-13	28.6
WP_021111125.1\|2116593_2117547_-	ABC transporter permease	NA	NA	NA	NA
WP_021113962.1\|2117722_2119306_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_021111127.1\|2119525_2119993_-	ribonuclease HI	J9Q745	Salmonella_phage	2.7e-46	54.2
WP_005712106.1\|2120074_2120911_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_021109841.1\|2121005_2121410_-	H-NS histone family protein	NA	NA	NA	NA
WP_015939630.1\|2121921_2123448_+	Na+/H+ antiporter NhaC family protein	NA	NA	NA	NA
WP_021113963.1\|2123565_2125467_+	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_021113964.1\|2125463_2126000_+	redoxin domain-containing protein	NA	NA	NA	NA
WP_010786219.1\|2125996_2126389_+	heme lyase NrfEFG subunit NrfF	NA	NA	NA	NA
WP_021113965.1\|2126381_2127128_+	hypothetical protein	NA	NA	NA	NA
WP_021113966.1\|2127194_2128217_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.5e-25	33.5
WP_021113967.1\|2128218_2129871_-	iron ABC transporter permease	NA	NA	NA	NA
WP_021113968.1\|2130032_2131058_-	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_021113969.1\|2131684_2133082_+	heme-binding domain-containing protein	NA	NA	NA	NA
WP_021113970.1\|2133262_2133532_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_021113971.1\|2133663_2134983_-	sodium:proton antiporter	A0A2H4J178	uncultured_Caudovirales_phage	1.2e-30	35.2
WP_021113972.1\|2135165_2137040_+	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_021113973.1\|2137508_2138612_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	1.0e-51	39.1
2138664:2138692	attL	NA	NA	NA	NA
WP_021113974.1\|2138702_2139347_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	9.4e-42	42.5
WP_021113975.1\|2139477_2140677_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.4e-99	49.2
WP_042905789.1\|2140769_2141231_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.3e-42	58.8
WP_082259385.1\|2141342_2142134_-	ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	1.8e-10	28.0
WP_021113978.1\|2142133_2143069_-	branched-chain amino acid transport system / permease component family protein	NA	NA	NA	NA
WP_005712153.1\|2143262_2143481_+	YgjV family protein	NA	NA	NA	NA
WP_005712157.1\|2143759_2145181_-	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA
WP_005712159.1\|2145308_2146163_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.8e-32	39.5
WP_082259386.1\|2146565_2147621_-\|integrase	site-specific integrase	A0A077KGX2	Edwardsiella_phage	1.1e-58	36.8
WP_078208700.1\|2147524_2147830_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_062924288.1\|2148147_2148363_-	hypothetical protein	NA	NA	NA	NA
WP_021113984.1\|2148567_2149368_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	5.6e-12	46.3
WP_012621817.1\|2149935_2150154_+	hypothetical protein	A0A0M3LQV3	Mannheimia_phage	5.2e-21	77.8
WP_157834279.1\|2150446_2150614_-	hypothetical protein	NA	NA	NA	NA
WP_021113985.1\|2150839_2151106_+	CRISPR associated Cas2 family protein	NA	NA	NA	NA
WP_021113986.1\|2151102_2151339_-	hypothetical protein	A0A0M3LPU3	Mannheimia_phage	2.4e-11	41.0
WP_021112699.1\|2152070_2152277_+	hypothetical protein	NA	NA	NA	NA
WP_021118903.1\|2152305_2152740_-	hypothetical protein	Q7Y5W7	Haemophilus_phage	2.5e-38	60.4
WP_021113989.1\|2152749_2153637_-	hypothetical protein	Q7Y5W6	Haemophilus_phage	5.8e-26	32.1
WP_021113990.1\|2153740_2154409_-	helix-turn-helix transcriptional regulator	A0A0R6PHY1	Moraxella_phage	2.4e-16	27.1
WP_021113991.1\|2154551_2154767_+	helix-turn-helix domain-containing protein	Q19UN8	Mannheimia_phage	5.0e-08	55.6
WP_021118902.1\|2154787_2155033_+	bacteriophage CII family protein	A0A0M3LTF5	Mannheimia_phage	9.7e-16	62.5
WP_021110739.1\|2155754_2156540_+	replication protein	A0A0M3LS90	Mannheimia_phage	2.7e-27	71.3
WP_082259387.1\|2156539_2157211_+\|holin	holin	D0UIL4	Aggregatibacter_phage	1.1e-37	37.2
WP_078208831.1\|2157211_2157772_+	adenine methyltransferase	A0A0M3LNW2	Mannheimia_phage	4.8e-50	54.0
WP_080698141.1\|2158073_2158523_+	recombination protein NinB	Q7Y5V7	Haemophilus_phage	5.3e-44	60.0
WP_021113997.1\|2158556_2158970_-	type II toxin-antitoxin system HicB family antitoxin	Q775F5	Haemophilus_virus	1.4e-38	55.5
WP_005715063.1\|2158996_2159179_-	type II toxin-antitoxin system HicA family toxin	A0A0D4DC32	Acinetobacter_phage	4.5e-18	74.6
WP_035522926.1\|2159426_2160005_+	recombination protein NinG	A0A0U4KL68	Pseudomonas_phage	9.9e-51	55.1
WP_035522928.1\|2159994_2160456_+	antitermination protein	A0A0M3LPW4	Mannheimia_phage	1.8e-18	38.4
WP_035523043.1\|2160725_2161013_+	hypothetical protein	A0A0M3LR95	Mannheimia_phage	1.2e-12	55.0
WP_021114001.1\|2160987_2161533_+	lysozyme	Q19UR6	Mannheimia_phage	3.0e-41	48.1
WP_021114002.1\|2161505_2161850_+	DUF2570 domain-containing protein	A0A0M3LPB1	Mannheimia_phage	3.7e-05	56.2
WP_021118468.1\|2162414_2162930_+\|terminase	terminase small subunit	A0A0M3LPC3	Mannheimia_phage	3.5e-55	69.7
WP_082259388.1\|2162913_2164149_+\|terminase	PBSX family phage terminase large subunit	A0A0M3LTA2	Mannheimia_phage	7.7e-194	79.5
WP_082259389.1\|2164158_2165556_+	DUF4055 domain-containing protein	A0A0M3LQA1	Mannheimia_phage	1.5e-164	64.6
WP_021114006.1\|2165512_2165920_+	hypothetical protein	A0A0M3LQ07	Mannheimia_phage	2.7e-39	65.9
WP_010786638.1\|2166135_2167059_-	hypothetical protein	A4JWK0	Burkholderia_virus	6.0e-74	47.7
WP_021114007.1\|2167060_2167945_-	hypothetical protein	A4JWJ9	Burkholderia_virus	1.2e-36	54.3
WP_010786640.1\|2167935_2168124_-	Mu protein C/ Mor gp17 transcription regulator	Q6QIE8	Burkholderia_phage	1.5e-08	53.4
WP_021114008.1\|2168095_2168263_-	hypothetical protein	NA	NA	NA	NA
WP_082259390.1\|2168917_2169559_+	hypothetical protein	NA	NA	NA	NA
WP_021114010.1\|2169569_2169791_+	hypothetical protein	NA	NA	NA	NA
WP_082259391.1\|2169854_2170817_+	hypothetical protein	NA	NA	NA	NA
WP_043896572.1\|2170916_2171255_+	DUF3486 family protein	NA	NA	NA	NA
WP_082259392.1\|2173223_2176877_+	tape measure protein	A0A0M3LS69	Mannheimia_phage	7.7e-133	35.4
WP_082259393.1\|2176909_2177623_+\|tail	phage minor tail protein L	A0A0M3LSQ5	Mannheimia_phage	8.4e-68	55.5
WP_005714478.1\|2177619_2177901_-	HigA family addiction module antidote protein	A0A2L1IV52	Escherichia_phage	2.3e-08	36.6
WP_016527932.1\|2177912_2178191_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A0M3LQB1	Mannheimia_phage	4.0e-18	50.0
WP_157888994.1\|2178870_2179569_+	hypothetical protein	A0A0M3LQ61	Mannheimia_phage	3.1e-51	51.3
WP_082259394.1\|2179867_2180248_+	YacL family protein	NA	NA	NA	NA
WP_082259395.1\|2180324_2183318_-	YadA-like family protein	NA	NA	NA	NA
WP_021111730.1\|2184341_2184767_+	ribonuclease E inhibitor RraB	NA	NA	NA	NA
WP_035496779.1\|2185065_2186502_+	glycoside hydrolase family 32 protein	NA	NA	NA	NA
WP_021119057.1\|2186671_2187013_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_082259396.1\|2187169_2187772_+	transferrin-binding protein-like solute binding protein	NA	NA	NA	NA
WP_082259397.1\|2187838_2188933_+	DUF560 domain-containing protein	NA	NA	NA	NA
WP_021119054.1\|2189006_2189420_+	DUF2251 domain-containing protein	NA	NA	NA	NA
WP_082259398.1\|2190179_2190614_-\|transposase	transposase	NA	NA	NA	NA
WP_005713131.1\|2190801_2191281_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_157888996.1\|2193551_2194272_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_082259399.1\|2195310_2197038_-\|tRNA	arginine--tRNA ligase	A0A2K9L2F0	Tupanvirus	3.0e-87	34.6
WP_078208432.1\|2197074_2197692_+	VOC family protein	NA	NA	NA	NA
WP_021112925.1\|2197712_2198177_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_035497322.1\|2198206_2198467_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_021112950.1\|2198991_2199798_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_021112908.1\|2199917_2200592_-	7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter	A0A2I7SAW6	Vibrio_phage	3.0e-59	57.7
WP_082259400.1\|2201177_2202035_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	1.3e-54	37.6
WP_021113768.1\|2202375_2203272_+	ATP phosphoribosyltransferase	NA	NA	NA	NA
WP_021113767.1\|2203547_2204834_+	histidinol dehydrogenase	NA	NA	NA	NA
WP_021112921.1\|2204928_2205981_+	histidinol-phosphate transaminase	NA	NA	NA	NA
2204887:2204915	attR	NA	NA	NA	NA
WP_021112912.1\|2206062_2206518_+\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage