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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP020104 Spirosoma aerolatum strain KACC 17939 chromosome, complete genome 2 crisprs cas7,cas5,cas6,Cas9_archaeal,csa3,WYL,cas8b2,cas3,cas4,cas1,cas2,cas14j,DEDDh 1 2 2 0

Results visualization

1. NZ_CP020104
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020104_1 2528734-2532239 Unclear I-A,II-B,III-A
53 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020104_2 4322081-4322247 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP020104_1 1.3|2528896|37|NZ_CP020104|PILER-CR,CRISPRCasFinder,CRT 2528896-2528932 37 NZ_CP020104.1 4654278-4654314 1 0.973

1. spacer 1.3|2528896|37|NZ_CP020104|PILER-CR,CRISPRCasFinder,CRT matches to position: 4654278-4654314, mismatch: 1, identity: 0.973

tgatatatcgaatttacttgaagcatttcggggtgta	CRISPR spacer
tgatatatcgaatttacttgaagcatttcgaggtgta	Protospacer
******************************.******

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP020104_1 1.53|2532179|31|NZ_CP020104|CRISPRCasFinder,CRT 2532179-2532209 31 MN694424 Marine virus AFVG_250M468, complete genome 32611-32641 8 0.742
NZ_CP020104_1 1.31|2530735|34|NZ_CP020104|PILER-CR,CRISPRCasFinder,CRT 2530735-2530768 34 NZ_LR134454 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence 84086-84119 11 0.676

1. spacer 1.53|2532179|31|NZ_CP020104|CRISPRCasFinder,CRT matches to MN694424 (Marine virus AFVG_250M468, complete genome) position: , mismatch: 8, identity: 0.742

ttacagcgggttttgcccgtattggtccact	CRISPR spacer
cgacagcaggttttgcccatattggtacttc	Protospacer
. *****.**********.******* * ..

2. spacer 1.31|2530735|34|NZ_CP020104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 11, identity: 0.676

tctacgtagagcgttatcaccgtgtacccttcgc	CRISPR spacer
cgggcgtcgagcgtgatcaccgtgtacccgcgct	Protospacer
.  .*** ****** ************** .  .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2645273 : 2696471 41 Staphylococcus_virus(11.11%) integrase,protease,terminase,plate,transposase attL 2645974:2645996|attR 2668493:2668515
DBSCAN-SWA_2 4909628 : 4922991 15 Bacillus_phage(100.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage