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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP020106 Escherichia coli strain 13E0780 chromosome, complete genome 7 crisprs c2c9_V-U4,csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT 0 10 19 0

Results visualization

1. NZ_CP020106
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020106_1 758868-759119 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020106_2 774979-775096 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020106_3 1277587-1277981 TypeI-E I-E
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020106_4 1300301-1300879 TypeI-E I-E
9 spacers
cas1,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020106_5 2629251-2629374 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020106_6 3368883-3368974 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020106_7 3778916-3779060 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP020106_6 6.1|3368909|40|NZ_CP020106|CRISPRCasFinder 3368909-3368948 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
NZ_CP020106_5 5.1|2629294|38|NZ_CP020106|CRISPRCasFinder 2629294-2629331 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP053858 Rhizobium pusense strain 76 plasmid pR76, complete sequence 455664-455695 5 0.844
NZ_CP020106_3 3.4|1277799|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1277799-1277830 32 MH389777 Dickeya phage vB_DsoM_JA11, complete genome 116689-116720 6 0.812
NZ_CP020106_3 3.4|1277799|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1277799-1277830 32 MH460462 Dickeya phage vB_DsoM_JA33, complete genome 116679-116710 6 0.812
NZ_CP020106_3 3.5|1277860|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1277860-1277891 32 CP054922 Streptomyces sp. NA03103 plasmid unnamed2, complete sequence 68158-68189 6 0.812
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NC_003037 Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence 270741-270772 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NC_017327 Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence 1429126-1429157 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP021798 Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence 450512-450543 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NC_017324 Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence 1363718-1363749 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP009145 Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence 259589-259620 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP021801 Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence 156145-156176 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP021819 Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence 108131-108162 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP021824 Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence 136871-136902 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP021813 Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence 308731-308762 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NC_018683 Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence 386165-386196 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP021794 Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence 1141409-1141440 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP021809 Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence 239251-239282 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP021217 Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence 1491172-1491203 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP026526 Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence 173783-173814 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP019483 Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence 251909-251940 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NZ_CP019486 Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence 227862-227893 8 0.75
NZ_CP020106_4 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300636-1300667 32 NC_020527 Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence 270403-270434 8 0.75
NZ_CP020106_4 4.9|1300819|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300819-1300850 32 HM029250 Lactococcus phage 949, complete genome 55071-55102 8 0.75
NZ_CP020106_3 3.3|1277738|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1277738-1277769 32 NZ_CP040258 Moraxella osloensis strain MOXF1 plasmid pMOXF1, complete sequence 12838-12869 9 0.719
NZ_CP020106_3 3.4|1277799|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1277799-1277830 32 NZ_CP039965 Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence 712830-712861 9 0.719
NZ_CP020106_4 4.7|1300697|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300697-1300728 32 CP054922 Streptomyces sp. NA03103 plasmid unnamed2, complete sequence 68158-68189 9 0.719
NZ_CP020106_3 3.2|1277677|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1277677-1277708 32 MN694030 Marine virus AFVG_250M187, complete genome 18204-18235 10 0.688
NZ_CP020106_4 4.5|1300575|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300575-1300606 32 MK449011 Streptococcus phage Javan92, complete genome 36157-36188 11 0.656
NZ_CP020106_4 4.5|1300575|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300575-1300606 32 MK448835 Streptococcus phage Javan93, complete genome 36157-36188 11 0.656
NZ_CP020106_4 4.5|1300575|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300575-1300606 32 MK448836 Streptococcus phage Javan95, complete genome 37400-37431 11 0.656
NZ_CP020106_4 4.5|1300575|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300575-1300606 32 MK448825 Streptococcus phage Javan639, complete genome 37400-37431 11 0.656
NZ_CP020106_4 4.9|1300819|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT 1300819-1300850 32 NC_009760 Bacillus phage 0305phi8-36, complete genome 157057-157088 11 0.656

1. spacer 6.1|3368909|40|NZ_CP020106|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 5.1|2629294|38|NZ_CP020106|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

3. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053858 (Rhizobium pusense strain 76 plasmid pR76, complete sequence) position: , mismatch: 5, identity: 0.844

acggcg-aatatagctgtcaacgcgctcgacat	CRISPR spacer
-tggcgcaatatagctgtcgacgcgctcgtcaa	Protospacer
 .**** ************.********* ** 

4. spacer 3.4|1277799|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to MH389777 (Dickeya phage vB_DsoM_JA11, complete genome) position: , mismatch: 6, identity: 0.812

gcgttgatgttcttgcgggtgttgcaaatatt	CRISPR spacer
gcgttgatgtgcttgcaggtgttgcaggtaaa	Protospacer
********** *****.*********..**  

5. spacer 3.4|1277799|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to MH460462 (Dickeya phage vB_DsoM_JA33, complete genome) position: , mismatch: 6, identity: 0.812

gcgttgatgttcttgcgggtgttgcaaatatt	CRISPR spacer
gcgttgatgtgcttgcaggtgttgcaggtaaa	Protospacer
********** *****.*********..**  

6. spacer 3.5|1277860|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to CP054922 (Streptomyces sp. NA03103 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

--tttcagcagttcagcgtaacaccgacggtcac	CRISPR spacer
gccttccgc--ttcaccggaacaccgacggtcac	Protospacer
  .*** **  **** ** ***************

7. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

8. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

9. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

10. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

11. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

12. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

13. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

14. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

15. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

16. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

17. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

18. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

19. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

20. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

21. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

22. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

23. spacer 4.6|1300636|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

acggcgaatatagctgtcaacgcgctcgacat	CRISPR spacer
atgccgaatatagctgttaatgcgctcaaacc	Protospacer
*.* *************.**.******.*  .

24. spacer 4.9|1300819|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to HM029250 (Lactococcus phage 949, complete genome) position: , mismatch: 8, identity: 0.75

tcggtggctggattgaaaaagaagata---atctg	CRISPR spacer
atggtggctggacagaaaaagaagagatagat---	Protospacer
 .**********. *********** *   **   

25. spacer 3.3|1277738|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040258 (Moraxella osloensis strain MOXF1 plasmid pMOXF1, complete sequence) position: , mismatch: 9, identity: 0.719

gattttaataactgttgatctactccttgcaa	CRISPR spacer
aattttaataattgtcgatctacttcaggtgt	Protospacer
.**********.***.********.*  *.. 

26. spacer 3.4|1277799|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gcgttgatgttcttgcgggtgttgcaaatatt	CRISPR spacer
tcgttgatgttcttgctggtgctgaactggct	Protospacer
 *************** ****.** *   ..*

27. spacer 4.7|1300697|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to CP054922 (Streptomyces sp. NA03103 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttccagcagttcagcgtaacaccgacggtcac	CRISPR spacer
gccttccgcttcaccggaacaccgacggtcac	Protospacer
 .*.  *. **** ** ***************

28. spacer 3.2|1277677|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to MN694030 (Marine virus AFVG_250M187, complete genome) position: , mismatch: 10, identity: 0.688

cctaatttttatatagctgcggatgatgtaaa	CRISPR spacer
taatatttttctatagctgcggatggtgcgtc	Protospacer
.   ****** **************.**..  

29. spacer 4.5|1300575|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to MK449011 (Streptococcus phage Javan92, complete genome) position: , mismatch: 11, identity: 0.656

gactgctcagattgggaatttgaccagcgacc	CRISPR spacer
agtcgctcagattgggaatttgtcaagatgta	Protospacer
....****************** * **  .. 

30. spacer 4.5|1300575|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to MK448835 (Streptococcus phage Javan93, complete genome) position: , mismatch: 11, identity: 0.656

gactgctcagattgggaatttgaccagcgacc	CRISPR spacer
agtcgctcagattgggaatttgtcaagatgta	Protospacer
....****************** * **  .. 

31. spacer 4.5|1300575|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to MK448836 (Streptococcus phage Javan95, complete genome) position: , mismatch: 11, identity: 0.656

gactgctcagattgggaatttgaccagcgacc	CRISPR spacer
agtcgctcagattgggaatttgtcaagatgta	Protospacer
....****************** * **  .. 

32. spacer 4.5|1300575|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to MK448825 (Streptococcus phage Javan639, complete genome) position: , mismatch: 11, identity: 0.656

gactgctcagattgggaatttgaccagcgacc	CRISPR spacer
agtcgctcagattgggaatttgtcaagatgta	Protospacer
....****************** * **  .. 

33. spacer 4.9|1300819|32|NZ_CP020106|PILER-CR,CRISPRCasFinder,CRT matches to NC_009760 (Bacillus phage 0305phi8-36, complete genome) position: , mismatch: 11, identity: 0.656

tcggtggctggattgaaaaagaagataatctg	CRISPR spacer
cgctcatctcgattgaagaagaagataatcaa	Protospacer
.   .. ** *******.************ .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 814379 : 860373 44 Escherichia_phage(18.75%) transposase,tRNA,protease,integrase attL 805195:805210|attR 846035:846050
DBSCAN-SWA_2 1439297 : 1498638 72 Salmonella_phage(47.83%) holin,head,tail,tRNA,terminase,transposase,integrase attL 1443444:1443462|attR 1508893:1508911
DBSCAN-SWA_3 1565951 : 1611952 55 Escherichia_phage(64.81%) tail,integrase,terminase,holin attL 1569050:1569066|attR 1610286:1610302
DBSCAN-SWA_4 1991689 : 2070642 91 Stx2-converting_phage(43.37%) holin,capsid,head,tail,tRNA,protease,terminase,integrase attL 1994164:1994184|attR 2050009:2050029
DBSCAN-SWA_5 2215235 : 2304262 102 Escherichia_phage(40.62%) holin,capsid,head,tail,terminase,portal,transposase,integrase attL 2199739:2199756|attR 2250882:2250899
DBSCAN-SWA_6 2406695 : 2485273 91 Escherichia_phage(39.29%) holin,tail,tRNA,protease,portal,integrase attL 2402893:2402909|attR 2435948:2435964
DBSCAN-SWA_7 2702844 : 2765672 74 Escherichia_phage(37.04%) holin,lysis,tail,protease,terminase,portal,integrase attL 2706949:2706965|attR 2740677:2740693
DBSCAN-SWA_8 3047959 : 3099908 58 Enterobacteria_phage(25.0%) holin,head,tail,protease,terminase,transposase NA
DBSCAN-SWA_9 3204558 : 3271777 71 Stx2-converting_phage(36.17%) holin,capsid,head,tail,tRNA,terminase,transposase,integrase attL 3253351:3253371|attR 3279487:3279507
DBSCAN-SWA_10 3356720 : 3429473 86 Escherichia_phage(51.95%) holin,lysis,capsid,tail,protease,portal,terminase,bacteriocin,transposase,integrase attL 3367657:3367672|attR 3431194:3431209
DBSCAN-SWA_11 3460749 : 3503473 51 Escherichia_phage(30.56%) transposase,tail,protease,holin NA
DBSCAN-SWA_12 3609339 : 3660205 54 uncultured_Caudovirales_phage(10.0%) capsid,tail,tRNA,protease,terminase,integrase attL 3613785:3613804|attR 3654298:3654317
DBSCAN-SWA_13 3663271 : 3692396 36 Salmonella_phage(85.29%) lysis,capsid,plate,head,tail,terminase,portal,integrase attL 3683960:3683974|attR 3695601:3695615
DBSCAN-SWA_14 3991395 : 4031597 48 Enterobacteria_phage(56.76%) transposase,holin,integrase,protease attL 4007201:4007247|attR 4031611:4031657
DBSCAN-SWA_15 4277145 : 4338848 54 Enterobacteria_phage(25.0%) transposase,holin,integrase,capsid attL 4300134:4300151|attR 4317156:4317173
DBSCAN-SWA_16 4365931 : 4452581 96 Shigella_phage(47.83%) plate,head,tail,tRNA,protease,transposase,integrase attL 4373655:4373674|attR 4412239:4412258
DBSCAN-SWA_17 4668195 : 4744317 87 Enterobacteria_phage(36.84%) holin,capsid,head,tail,tRNA,portal,terminase,integrase attL 4709805:4709819|attR 4745503:4745517
DBSCAN-SWA_18 4984049 : 4993157 6 Stx2-converting_phage(66.67%) transposase,protease NA
DBSCAN-SWA_19 5083293 : 5131667 58 Enterobacteria_phage(39.22%) holin,capsid,head,tail,tRNA,portal,terminase,integrase attL 5078672:5078686|attR 5092413:5092427
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage