CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP020351	Pseudomonas amygdali pv. lachrymans strain NM002 chromosome, complete genome	3 crisprs	DEDDh,PD-DExK,DinG,RT,cas3,csa3	3	1	20	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP020351_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020351_1

908111-908740

Orphan

Consensus_repeat	Method
GTGTTGCCCGGNGCAACA	CRT

17 spacers

The CRISPR arrays of NZ_CP020351_1

>merge|NZ_CP020351|1|908111-908740|CRT
GTGATTCCCGGGGCATCACCCAGATCGATGGCCGGAGTGTTGCCAGTGGCAACAGCCAGCTCGGCGTCCGGAGTGTTGCCCGGGGCAACACCTGGATCGGCGTTCGCAGTGTTGCCCGGTGCAACACCCAGGTCGGAGTTCGGAGTGTTGCCCGGTGCAACACCCAGGTCGGCGTCCGGAGTGTTGCCCGGGGCAACACCCGGGTCGGAGTTCGAAGTGTTGCCCGGGGCAACAGCCAGATTGGTGTCCGGAGTGTTGCCCGGGGCAACACCCGGGTCGGAGTTCGAAGTGTTGCCCGGGGCAACAGCCAGCTCGGCGTCCGGAGTGTTGCCCTGGGCAACACTTGGATCGGTGTTCGCAGTGTTGCCCGGTGCAACACCCAGGTCGGAGTTCGGAGTGTTGCCCGGTGCAACACCCAGGTCGGAGTTCGGAGTGTTGCCCGGTGCAACACCCAGGTCGGAGTTCGGAGTGTTGCCCGGGGCAACACCCGGGTCGGAGTTCGAAGTGTTGCCCGGGGCAACAGCCAGATCGGTGTCCGGAGTGTTGCCCGGAGCAACACCTGGATCGGTGTTCGCAGTGTTGCCCGGTGCAACACCCAGGTCGGAGTTCGGAGTGTTGCCCGGGGCAACA

>NZ_CP020351|1|1|908111-908740|CRT
GTGATTCCCGGGGCATCA	CCCAGATCGATGGCCGGA
GTGTTGCCAGTGGCAACA	GCCAGCTCGGCGTCCGGA
GTGTTGCCCGGGGCAACA	CCTGGATCGGCGTTCGCA
GTGTTGCCCGGTGCAACA	CCCAGGTCGGAGTTCGGA
GTGTTGCCCGGTGCAACA	CCCAGGTCGGCGTCCGGA
GTGTTGCCCGGGGCAACA	CCCGGGTCGGAGTTCGAA
GTGTTGCCCGGGGCAACA	GCCAGATTGGTGTCCGGA
GTGTTGCCCGGGGCAACA	CCCGGGTCGGAGTTCGAA
GTGTTGCCCGGGGCAACA	GCCAGCTCGGCGTCCGGA
GTGTTGCCCTGGGCAACA	CTTGGATCGGTGTTCGCA
GTGTTGCCCGGTGCAACA	CCCAGGTCGGAGTTCGGA
GTGTTGCCCGGTGCAACA	CCCAGGTCGGAGTTCGGA
GTGTTGCCCGGTGCAACA	CCCAGGTCGGAGTTCGGA
GTGTTGCCCGGGGCAACA	CCCGGGTCGGAGTTCGAA
GTGTTGCCCGGGGCAACA	GCCAGATCGGTGTCCGGA
GTGTTGCCCGGAGCAACA	CCTGGATCGGTGTTCGCA
GTGTTGCCCGGTGCAACA	CCCAGGTCGGAGTTCGGA
GTGTTGCCCGGGGCAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020351.1\|WP_005747020.1\|899476_900160_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376158
NZ_CP020351.1\|WP_046835505.1\|915079_915766_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020351.1\|WP_057416400.1\|905808_906642_-\|Rha-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378235
NZ_CP020351.1\|WP_005747011.1\|907207_907987_-\|TIGR03761-family-integrating-conjugative-element-protein	unknown	unknown	gnl\|CDD\|274771
NZ_CP020351.1\|WP_005747017.1\|904718_905006_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020351.1\|WP_005747006.1\|912669_912987_-\|Arc-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|367702
NZ_CP020351.1\|WP_054068173.1\|900481_902434_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350677
NZ_CP020351.1\|WP_155008498.1\|916205_916796_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020351.1\|WP_086004152.1\|904442_904622_-\|CrpP-family-protein	unknown	unknown	unknown
NZ_CP020351.1\|WP_162234942.1\|905188_905326_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020351.1\|WP_005747008.1\|910150_910888_-\|DUF2857-domain-containing-protein	unknown	unknown	gnl\|CDD\|378591
NZ_CP020351.1\|WP_080164410.1\|908792_910154_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020351.1\|WP_005747000.1\|916792_918139_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP020351.1\|WP_080164411.1\|910924_912667_-\|chromosome-partitioning-protein-ParB	unknown	unknown	gnl\|CDD\|213858
NZ_CP020351.1\|WP_044299912.1\|902436_904338_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020351.1\|WP_155008495.1\|913896_914568_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020351.1\|WP_005747005.1\|913164_913569_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020351.1\|WP_005760514.1\|905335_905797_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|169261
NZ_CP020351.1\|WP_046835511.1\|906647_907202_-\|DUF3158-family-protein	unknown	unknown	gnl\|CDD\|314329
NZ_CP020351.1\|WP_046835504.1\|913570_913900_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP020351.1\|WP_005747020.1\|899476_900160_+\|hypothetical-protein	gnl\|CDD\|376158	pfam18735, HEPN_RiboL-PSP, RiboL-PSP-HEPN. RiboL-PSP-HEPN. Fused to endoRNase L-PSP ; in operon with ParB.	0.00324488
NZ_CP020351.1\|WP_080164411.1\|910924_912667_-\|chromosome-partitioning-protein-ParB	gnl\|CDD\|213858	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein. Members of this protein family carry the ParB-type nuclease domain and are found in integrating conjugative elements (ICE) in the same class as PFGI-1 of Pseudomonas fluorescens Pf-5.	5.12922e-144
NZ_CP020351.1\|WP_057416400.1\|905808_906642_-\|Rha-family-transcriptional-regulator	gnl\|CDD\|378235	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha). Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that Rha is a phage regulatory protein.	1.88687e-30
NZ_CP020351.1\|WP_005747008.1\|910150_910888_-\|DUF2857-domain-containing-protein	gnl\|CDD\|378591	pfam11198, DUF2857, Protein of unknown function (DUF2857). This is a bacterial family of uncharacterized proteins.	1.79878e-41
NZ_CP020351.1\|WP_005747011.1\|907207_907987_-\|TIGR03761-family-integrating-conjugative-element-protein	gnl\|CDD\|274771	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family. Members of this protein family, such as PFL4669, are found in integrating conjugative elements (ICE) of the PFGI-1 class as in Pseudomonas fluorescens.	1.10603e-108
NZ_CP020351.1\|WP_005747000.1\|916792_918139_-\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP020351.1\|WP_005747006.1\|912669_912987_-\|Arc-family-DNA-binding-protein	gnl\|CDD\|367702	pfam03869, Arc, Arc-like DNA binding domain. Arc repressor act by he cooperative binding of two Arc repressor dimers to a 21-base-pair operator site. Each Arc dimer uses an antiparallel beta-sheet to recognize bases in the major groove.	8.28024e-08
NZ_CP020351.1\|WP_054068173.1\|900481_902434_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|350677	cd17919, DEXHc_Snf, DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins. Sucrose Non-Fermenting (SNF) proteins DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.3187e-43
NZ_CP020351.1\|WP_005760514.1\|905335_905797_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|169261	PRK08182, PRK08182, single-stranded DNA-binding protein; Provisional.	3.26866e-65
NZ_CP020351.1\|WP_046835511.1\|906647_907202_-\|DUF3158-family-protein	gnl\|CDD\|314329	pfam11358, DUF3158, Protein of unknown function (DUF3158). Some members in this family of proteins are annotated as integrase regulator R however this cannot be confirmed. This family of proteins with unknown function appear to be restricted to Proteobacteria.	5.79641e-64

>NZ_CP020351.1|WP_005747011.1|907207_907987_-|TIGR03761-family-integrating-conjugative-element-protein
MADNFQLNLGSLRSSVNLTLHTHHASRLWFGRQRTEGKPGMIGLSGFANILNRIKRGCEQDDPYSDWFLLLIEEKIDTAEQEMKDIDNRLDEVMAALPAMLSIGENLSVQPVTLPLYLSTPLAFKAVYLLTAYDELVRRILLASHVGLIDNNAKGQWLDEGAAILRRLFGLSQRYKFSGASRGDFAAKNARAEQAREMYAPFGEIPQDILEGVRRSKFAPALATASNSPADVDDHEDSFDEAMTLGQSDHEQPGSESEE
>NZ_CP020351.1|WP_046835511.1|906647_907202_-|DUF3158-family-protein
MKQQTASGKKLQQGAFQSLQQDAFSTLQHAPFLKGLLKPFKGKGGMLQLTELCRSLEEDLNALAEDQVLAQANRHPYTLLPVRMVRQRTSAGTVFLRWQEMGTRQMGVNVWSSLLADPRTPESLLQDLHAMEQQRVALNMQISLIHSIGRQAAECAEKMAQADAVYAERLQQINQSRVANDSQE
>NZ_CP020351.1|WP_057416400.1|905808_906642_-|Rha-family-transcriptional-regulator
MAESIVTSSNANATSEVSIELVKGQPMTTSVDIASHFGKLHKNVIKAIKALECTDSFHKLNFEPIQIDVDLGMGRTRKDPAFRITRDGFTFLCMGFTGKEAARWKEAYINAFNQMELALKAQPVEVDNKAVLAFALKTLELMRGQSQGRPPRPNSEQVVQTYLDIQSLDQATAEQVKLALIFVQGQIIGEGSAAVNLPNVAGSSIAKDLLYGLLRSAHDAELMFNALYDKGVEALASDAFKNHMTGKLADTSRQARELLGYVASHAARTPYATKFTH
>NZ_CP020351.1|WP_005760514.1|905335_905797_-|single-stranded-DNA-binding-protein
MGTSIDWEGNIGSAPEFKEFANGNKDPRRLLRLNVYFDNSIPKSDGTGFEDRGGFWANVEFWHKDAEHYANVYQKGMRVLIQGRAVMDTWTKDGEDFSALKVQASRVGILPARIEAVQIAQSHPQQAARTQQPQRAQNNNDDAPPDFDDDIPV
>NZ_CP020351.1|WP_162234942.1|905188_905326_-|hypothetical-protein
MKNRAFCVRLLVEMKLLSVVLHQQAALSALFIRQSKKTPFTWISW
>NZ_CP020351.1|WP_005747017.1|904718_905006_-|hypothetical-protein
MTNEIVKTETLPIIVELQYEVALQAPDVRAALFDCEGAQARRDSIGRKLCSGSTAVTVRDLERWEKALSDAKKVLMQIAPILERHPICASVVAHS
>NZ_CP020351.1|WP_086004152.1|904442_904622_-|CrpP-family-protein
MRDTPDRRRFNNPHHAVMRAGADAARSGIPLHACPYRHPAMRASWLQGFAQAQQQSFKF
>NZ_CP020351.1|WP_044299912.1|902436_904338_-|hypothetical-protein
MTAEPICKPNFVQTLLDIAKFPERHRAVANTWADHFGVPPERRDEFILHYLTHTSSTRCWCVSLHNDDRVARPTVARFGRQLQYFDGRLISAVRFDEKRKVPVHAPTTSRALKLVHQLITHGGAQALLTSFSKHARDLALHEAQLSIKPLMKLDFLAASEEGRNKRFYGPRNRFYLTCIGATLKKFCQSLDQELLHAVRSVQCPSAQLYNWLARGDRTRRLQALKAQPVLIPVLVIGHAMPWPKIADSLLLEQCPWKDLQEYCGSCDDDDCTRDGAGLVGHAADTGLPLNKVLAWLFSTPISAIRYLGQQRVYDTGSALSRLNAEGLEAGWGDLIAGARLGNRRPSTKAQWRSFYTFRSAIPWSLLRALPDMNALLAGCPTDWADPAWSNITTKLVDLRELFSSLDRAGSRAALNTKNRLNAFVGGLSFRQISNLTDAFHSELEAIRARLEKAIPPEPSDAFTRWPGLMLNTDTITCCETGLHIVELRCADDLDLEHRALGHCIDTYDYHAFLGNCRLLSIRSGATPLASVELALRAHGHEHKTGQSGKWTPRHLHVVQIRGHHNETSDTLSPVMKAFERFIAEVRNGRIPVNLDWPNLVAKMDRYADKTSIYNIRFAEEIIGWAERLMDRGL
>NZ_CP020351.1|WP_054068173.1|900481_902434_-|DEAD/DEAH-box-helicase
MAAPRLMNKRPVLLRKAIYDGYDFGLSLSYLEGANKLLLRRGGFFIRRSDHPLNQFWRVPKAKLLDDLDVLYRELAELADGKHIESWQAFRDRITSAQSDLHRDAFTWGMKFRLAPLAEGGVILSGDFHPGAVAIAKRMRGVYLSAGKAWRVQGTAELVRSNLILDLGLAEDQFEILDTLQELLADGSVSPVREVTSISLGGYSPESTKSEEEVSDSGIYLASVPSIKNTELTNAEIDKALESFSLMDHQPAGIRHLLQRTSALLADDMGLGKTRQAVIAAGIRAQGKPVLVIVLNSLIINWQREILMVFPEAQIALQTFDAQAGWIIVNYERLGDFVRHAGCFAVMVIDEAHRLKEPTAAWTRHGFDIAAQVQNRYLLTGTPVLNREAELHTLLRLSGHPIGQLPLNEFCERFAGSPEFRKTLRTEIADWMLRRRKDVLPNLKGKQRQTVPVVLSQAERDEYNQIMRSDTHRFARLGALRQLLERVKVLIVADLMAELDVDDKVILFCEYQESVVTLREYCLKMGIGCVTLVGSDSPKKRQKAIDAFQQDQDCRVFIGTRSAAGTGYNLTAANYVFFLGLPWTPGLQDQAEDRAYRNGQLRMVVVKIPLAEDTIDQQLWQMLMDKRALASDLIDPEAEESSKKALAEIL
>NZ_CP020351.1|WP_005747020.1|899476_900160_+|hypothetical-protein
MSPDIARQAALSFPRMGTYLSVNSTNPSPLSAGIALYAWNAQAAAAFMYPLHFCEVLVRNAVAEVLTATYGPQWPWNNGFFLSLPNPSSPSAFKPRTAVLAACRKAEDLAGADTPSTDKAIAEMSFAFWQSMFTARYDHGLWANHLKTVFPNAPASMPNHEIRSKIHKSLESIRKLRNRIAHHEPIFARHLAQDYSNILRLVEYRCKHTSKWMDDTQSVRQVLQARP
>NZ_CP020351.1|WP_080164410.1|908792_910154_-|hypothetical-protein
MTKMNRRPPLAVAINAAAGTLQNHLLLQQMKLAQQQNAGSGSAPSDTESVRDEPYAGVVFSGNPHETVPRGLLLDDRLSPLERNVWQVFRLLINGDGVTAFPSYEKLRPYLGSSPGKSASKETVAKALTVLRLTRWLSLGQRVRDSVSGRVQGNVYILHDEPVGCAEAMEIDHHYMQLVGQALEHANKAVRVVADHAFKEFAAATGTMPSRLEVIEQRWQQQGWHDAPQAIEHAQDGTEFGIRTKGSDESDLLSSDSELSKKSPGANLKTPGSDSELSLNSASFGLVRIPNSYSTYTNTNTSVCKSFVPREAQESAPDLPSGFERFTQDQRDKAMIALQRVEPGLRTPLLDQWQHRCKSGSVKNPFGYLLSCTQKALSGEFNAQWQAPSAATQQPQVAASHSRSPTAQPPAPTQVPHPPVTRASPRERDASSLATGRDAMLSIKQMVRPRTQG
>NZ_CP020351.1|WP_005747008.1|910150_910888_-|DUF2857-domain-containing-protein
MSKRHNPLNEAMVAQILHHLRNGEVKRCIDMGLDPEILVLLQQPSSQSVLLNSNVIWCQVAIDPDMVKRLLSNKERTDEEIRIVQRALRLGATTPMLQQFFGMSPQEVSLQRVLVGVPGKPGRFRDLPDDTPLWHRFVQLMADLNVDHTDGVALLDVAMLLTEEINIPAEEQDSHSPEPITLGLVWNKIQQWLAQDLYPPGKNRKSARLVLMSESRRLTKANPKGRAPERGLEESAAGKVEGERM
>NZ_CP020351.1|WP_080164411.1|910924_912667_-|chromosome-partitioning-protein-ParB
MASKLTADEITGKLLQGSFSRSGPSVDRLPDPIADTPMVLTLDELSAYEHNPRTVTNIKYQEIKDSIRVRGLDQPPQVTRRPGEKKFIIRNGGNTRLSILRELYKETGDERFYRISVLFRPWDGERGEIIALTGHLAENDLRGNLMFIERAVGIENARAIYEQETGEPISQRELAKRLKADGYPVSQSHISKMQETIRCLLPVIPAALYSGLGKPQIERLLALRKAAAQTWQTHTEGKTNVTDFEVLFQDVLSMFDGDASEFVCERVQDELISHMKEGTGRTYEQVLLNVNENLTMARRSSVIETPLRLPPTPQVQPEAESESDAYRPQEDQEPKTLQSESLTQSPDTQVTAPSASALKTDKPLPPPLSDEERIARLEAHVVTPVSTTDRVFEIKRQVAALDGEELPDFKANALVSIPVQAGGLHPISDVWYIERIMDQPDQLRQVIAQLAHEIATTAGLNRDTVAQVPGGLGFICHEPPMDLELTELANNTLTLLQAISGVYAIALNQQTPEAPLDVAEFQFTAALGQLLLGSPRYEDREAVLAGRLDDACIVKLFRLIRLGRRLVELEAMNVDEPYTS
>NZ_CP020351.1|WP_005747006.1|912669_912987_-|Arc-family-DNA-binding-protein
MLALNCAAHTPSAMMENAMLNSETVNIRDDDKDEKFVVRFPMGMRARLSMAAKASHRSMNSECVHRIDCSLKQDQEIARLKAVIDVLLNGGTPASNVVQLSEAGQ
>NZ_CP020351.1|WP_005747005.1|913164_913569_-|hypothetical-protein
MARHYNILEEDLPSQSDRERDRLRIEKAITEYFNRGGSIQRVEADQRVNAPSFIINAEKTALLKAGTESQKQKKANALSDTELARLLRAHCTAGSSLFSAAASLNQTRKRCEAIARRYQIPFRSAAFGNARARS
>NZ_CP020351.1|WP_046835504.1|913570_913900_-|hypothetical-protein
MNTCAKALLITDECRNCGQHLPAHVAMTAAECPVCHSGDLVEVLTVETKALDAALNQMPRCMEYTVVFRMEDGCSRRSFMEKLTETFADQEVEILEIQAGNKLSGSEEQ
>NZ_CP020351.1|WP_155008495.1|913896_914568_-|hypothetical-protein
MLTPKKPNSVSVETPLPATATLLSSPDMPGISSEILCTALIEVCRHQLTYEGVRTNAWLVNDVLLTAQQWLFAEIRTYFEDNTDLLVDGRAFNSKTMMDRLREEQLISERCAAVMNQHEGNFQFSEVIRINPEIIWAESEPRPMSWLTKPFDCMGLRVVESRANRNTKGRRGSLPLLMALLPDQATRPSQVHSAQGLPGFHGVLATYPELAWPELSQAAKESL
>NZ_CP020351.1|WP_046835505.1|915079_915766_-|hypothetical-protein
MSPQPFALTDVRQAPSGWWLEMTTPPAPLSAPKQVQGSLSIELLREALALAVRHTIENDPPEARKAWLTEHHVWALYPALYRDLARALIDLDPSLQVPNQKDLIRQLAQSHLIARPRAVAVRETGSTSFSHLNLAVEIAPEHVWGDGEQRPPLWYETFADGPALKQVADLMGLPPIPEDQPRLALGSLLPKPQSQPDQWAGSVNPRVVLAIYWQAAELAPEEETRSIF
>NZ_CP020351.1|WP_155008498.1|916205_916796_-|hypothetical-protein
MTSFIELTKESLAPHLHEAISQCLTEKPHPSAWLVDDIVLIDAAALSALISIALNPLPRRQIPSDLADLLLQLELVSRPQRYVLRYDSKFGGRARWRPLLQLAKGELPDNTLLDAFPWFCHEVEDHPFMALGIPGDIHATRPQANRWRLALLLPDPSTLASHHRPSPALPAPHAVIATYREESFVGSDQETRSAGE
>NZ_CP020351.1|WP_005747000.1|916792_918139_-|replicative-DNA-helicase
MDISHMSPPHSVEAEQAVLGGLMLDNESWDLIADRIKADDFFRAEHRLIFQSIAALAESNRPFDVVTVSDSIAAIDAAGGLAYLSELAKNTPSVANIKAYADTVSNRAHLRRLISHGYACTREASDPQADAAVVQDVIEQQLFALGQGRHTSDFVDVNQMLLQVVDKIDLRFNAGESVVGVPTGLSDLDELTGGLQPADLIILAARPSMGKTSLALNFVDAALQKDDHSTVQIYSLEMPAEAIIYRLLSILGHLNLEKLIRGQLEDEDWSRLSLAVAKVNSYRDRLVIDDQADLTPSAIRARARRGARRFGKPALIMIDYLQMMKCPGTENRANEISEISRSLKALAKEFDCPVVALSQLNRELERRQNKRPINADLRDSGALEQDADLILFVYRDEVYNADTEHKGIAELILGKHRNGSLGTVRTAFIPQHTRFENLSASTWQGARA

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Crispr_ID: NZ_CP020351_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020351_2

4459647-4459735

Orphan

Consensus_repeat	Method
CCTGTAGGAGCGGACTTGTCCGCGAAGAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020351_2

>merge|NZ_CP020351|2|4459647-4459735|CRISPRCasFinder
CCTGTAGGAGCGGACTTGTCCGCGAAGAGGCCAACAAGCCGAATGCTGACTTGTAGACTCCTGTAGGAGCGGACTTGTCCGCGAAGAGG

>NZ_CP020351|2|1|4459647-4459735|CRISPRCasFinder
CCTGTAGGAGCGGACTTGTCCGCGAAGAGG	CCAACAAGCCGAATGCTGACTTGTAGACT
CCTGTAGGAGCGGACTTGTCCGCGAAGAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020351.1\|WP_044299383.1\|4452878_4453637_-\|siderophore-iron-reductase-FhuF	unknown	unknown	gnl\|CDD\|274875
NZ_CP020351.1\|WP_007247761.1\|4461614_4462592_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP020351.1\|WP_004665996.1\|4447245_4448592_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|182754
NZ_CP020351.1\|WP_002554629.1\|4448588_4449266_-\|response-regulator	unknown	unknown	gnl\|CDD\|182755
NZ_CP020351.1\|WP_002554630.1\|4449293_4449644_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020351.1\|WP_005746238.1\|4470419_4472627_-\|peptidoglycan-binding-protein-LysM	unknown	unknown	gnl\|CDD\|225711
NZ_CP020351.1\|WP_161796206.1\|4455209_4455977_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP020351.1\|WP_005744755.1\|4453594_4455205_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236724
NZ_CP020351.1\|WP_005746236.1\|4468213_4469779_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP020351.1\|WP_005744749.1\|4449816_4450605_+\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223489
NZ_CP020351.1\|WP_002554636.1\|4456662_4459575_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|235966
NZ_CP020351.1\|WP_004663854.1\|4465224_4466328_+\|IS5-like-element-ISPsy19-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP020351.1\|WP_007247761.1\|4466434_4467412_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP020351.1\|WP_007247761.1\|4462827_4463805_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP020351.1\|WP_005746237.1\|4470029_4470380_+\|topoisomerase	unknown	unknown	gnl\|CDD\|235840
NZ_CP020351.1\|WP_044299379.1\|4450672_4451206_-\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP020351.1\|WP_080164738.1\|4459898_4461146_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|235968
NZ_CP020351.1\|WP_002552570.1\|4472722_4473157_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|179596
NZ_CP020351.1\|WP_044299381.1\|4452143_4452878_+\|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl\|CDD\|225524
NZ_CP020351.1\|WP_007247761.1\|4464040_4465018_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|225581

Protein	Function_ID	Function_description	E-value
NZ_CP020351.1\|WP_044299383.1\|4452878_4453637_-\|siderophore-iron-reductase-FhuF	gnl\|CDD\|274875	TIGR03951, Fe_III_red_FhuF, siderophore-iron reductase FhuF. Members of this protein family, including FhuF of E. coli, are siderophore ferric iron reductases that appear to play a role in iron removal from certain hydroxamate-type siderophores, including coprogen, ferrichrome, ferrioxamine B, and aerobactin. Genes occur in regularly in siderophore transport and/or biosynthesis clusters. The C-terminus includes four Cys residues in a C-C-10(X)-C-X-X-C motif that binds a 2Fe-2S cluster. Family TIGR03950 is similar, but especially in the C-terminal region, but likely acts on a different panel of siderophores. [Energy metabolism, Electron transport, Transport and binding proteins, Cations and iron carrying compounds].	5.65463e-67
NZ_CP020351.1\|WP_007247761.1\|4461614_4462592_+\|IS5-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	9.02304e-30
NZ_CP020351.1\|WP_004665996.1\|4447245_4448592_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|182754	PRK10815, PRK10815, two-component system sensor histidine kinase PhoQ.	3.18171e-81
NZ_CP020351.1\|WP_002554629.1\|4448588_4449266_-\|response-regulator	gnl\|CDD\|182755	PRK10816, PRK10816, two-component system response regulator PhoP.	2.72873e-81
NZ_CP020351.1\|WP_005746238.1\|4470419_4472627_-\|peptidoglycan-binding-protein-LysM	gnl\|CDD\|225711	COG3170, FimV, Tfp pilus assembly protein FimV [Cell motility and secretion / Intracellular trafficking and secretion].	1.25526e-57
NZ_CP020351.1\|WP_161796206.1\|4455209_4455977_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.4128e-83
NZ_CP020351.1\|WP_005744755.1\|4453594_4455205_-\|HAMP-domain-containing-protein	gnl\|CDD\|236724	PRK10604, PRK10604, sensor protein RstB; Provisional.	7.47466e-86
NZ_CP020351.1\|WP_005746236.1\|4468213_4469779_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	2.46947e-64
NZ_CP020351.1\|WP_005744749.1\|4449816_4450605_+\|dienelactone-hydrolase-family-protein	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	1.60854e-56
NZ_CP020351.1\|WP_002554636.1\|4456662_4459575_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|235966	PRK07207, PRK07207, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP020351.1\|WP_004663854.1\|4465224_4466328_+\|IS5-like-element-ISPsy19-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.72618e-25
NZ_CP020351.1\|WP_007247761.1\|4466434_4467412_+\|IS5-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	9.02304e-30
NZ_CP020351.1\|WP_007247761.1\|4462827_4463805_+\|IS5-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	9.02304e-30
NZ_CP020351.1\|WP_005746237.1\|4470029_4470380_+\|topoisomerase	gnl\|CDD\|235840	PRK06599, PRK06599, DNA topoisomerase I; Validated.	1.59489e-07
NZ_CP020351.1\|WP_044299379.1\|4450672_4451206_-\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00235085
NZ_CP020351.1\|WP_080164738.1\|4459898_4461146_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|235968	PRK07209, PRK07209, ribonucleotide-diphosphate reductase subunit beta; Validated.	0
NZ_CP020351.1\|WP_002552570.1\|4472722_4473157_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|179596	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional.	6.37625e-30
NZ_CP020351.1\|WP_044299381.1\|4452143_4452878_+\|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl\|CDD\|225524	COG2977, EntD, Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism].	1.88447e-64
NZ_CP020351.1\|WP_007247761.1\|4464040_4465018_+\|IS5-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	9.02304e-30

>NZ_CP020351.1|WP_002554636.1|4456662_4459575_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MQTDTTRENSPTGAPQASQTPQDLSATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGNAAASSRIHDTVARLTEQVSATFKRRMPSGGTIHIEEIQDQVELALMRAGEQKVARDYVIYRDSRAKERAVRAPEDQVQAHPSIRITLADGSFAPLDMGRLNTIVTEACEGLAEVDANLIQTETLKNLYDGVALKDVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADLYAKALPAYVATGIKFELLNPVLAEFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGVRFELPQIFFMRVAMGLAIEEKAREDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGPWTLFSPSEVPDLHDLTGKAFQERYEYYEALTEYPGKIKLFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHIVNGKLDTDKLKRTVDVAVRMLDNVIDINYYSVPQAKNSNLRHRPVGLGIMGFQDALYLQHIPYGSDAAVQFADTSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGILPLDSQQILIEQRGEKYIDVDLKETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARDLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKTTYYLRALAATSTEKSTVNTGKLNAVSSGGHGPDDSAITAPRPTEAAPAGPAPVPKACAIDEPDCEACQ
>NZ_CP020351.1|WP_161796206.1|4455209_4455977_-|response-regulator-transcription-factor
MGQPQQGEIALEPHTWHVLIVEDDQRLAELTSDYLHNNGLRVSIEGNGALAAARIIAEQPDLVILDLMLPGEDGFSICRSVRDRYDGPILMLTARTDDTDHIQGLDTGADDFVCKPVHPRVLLARIHALLRRSEAPQVPAAELRRLVFGPLVVDNALREAWLREQSIELTGAEFDLLWLLVANAGRTLSREEIFTALRGVGYDGQDRSIDVRISRIRPKIGDDPIHPRLIKTVRSKGYLFVPEAAQDMSGHVFSG
>NZ_CP020351.1|WP_005744755.1|4453594_4455205_-|HAMP-domain-containing-protein
MNSIFLRIYGGMLGVLVLVALLGVFALHVLNQSRGEQYRERLAHGTFTVMADNLVPLNDIERRRALAIWERLLGIPLSLQSIEQAGLDSGARGRLARGQVVVEQIGPHAARVYRQLSDKEPLLLSGEVQQITEQLARATIYLLIDELVRFPVNEQPARLQALRIDKGFGFDLHLLALDQADLDDDQRRRIYEGDTVMALGKGGDSIRVLAGIVDTNWVLEIGPLYQMNPYPLHWLLVIALMGLCFIGLVVYLLVRRLERRVLELEAAATQIAQGSLQTRVPTEGSDSVGRVAAAFNSMAEHLQRSLMIQRELVRAVSHELRTPVARLRFGLEMVSDATTPEARRKYMRGMDSDIQDLDKLVDEMLTYARLEQGAPTLNFQRVDLDALIDQVIAELAPLRADVRVSRGECLTSEEGEAAWVEAEPRYLHRAVQNLVSNAMRHAENEVRISYRLEAQQCRIDVDDDGPGVPEEAWEQIFTPFMRIDDSRTRASGGHGLGLSIVRRIIHWHEGRALIGRSASLGGACFSLSWPRTQVPR
>NZ_CP020351.1|WP_044299383.1|4452878_4453637_-|siderophore-iron-reductase-FhuF
MFQPVLAAYAGAALSAQLFSGPLERFGQTLLAADDSRPDSRPVVALPDLLQAERLDQLLLSSYGPQLMPSQLPVLVSQWAKFYFMQVIPPVLVASLVHGWHWPLALEQVALAVDERGLPNGVRLAGEGEAWRGIPADPFQQFAGLLDDNLQPFIAALSAYGGLPCAVLWSSAGDYLEGCLVQLATCSTVSLAPGLALLSERKRPDGRANPLFQAVRYVAQAQGGEPRRQRRVCCLSHRVEWVGRCEHCPLSG
>NZ_CP020351.1|WP_044299381.1|4452143_4452878_+|4'-phosphopantetheinyl-transferase-superfamily-protein
MPPMTQLPDLPVCCPELVQHWPLPHALPGAVLVSGRFDPHTLIDGDFQRCAVQMPASIQRSVAKRQAEFLAGRLCAREAMRQLDGRLHVPAVGEDRAPVWPADVCGSITHSTGWAAAVVAHKRQWRGLGLDTENLLSHERASRLAGEILTAAELADMAAGAQDQIALRVTLTFSIKEALFKALYPIVQKRFYFEDAQLLEWSADGSARLRLLIDLSSEWHARKELDGQFSVQDDHLLSLVAVEG
>NZ_CP020351.1|WP_044299379.1|4450672_4451206_-|transposase
MGRSRYTITEPEKPHFLTCTVVEWLPLFTRPALVDVLLNAWRYQQLHQGLQLYGYVILENHLHFVAQAPELDKCVNSFKSFTARQIIHVLEKANAQSALQRLRFVKPMHKTDRVYQVWQEGSHAELVWNEAVMRQKLDYIHHNPVKRGYVDVGEHWRYSSARDYEGQRGLIDIQRWY
>NZ_CP020351.1|WP_005744749.1|4449816_4450605_+|dienelactone-hydrolase-family-protein
MRVWIAMIMMGLTGLAQAAIKTEQIDYKSADGTKLVGYYAYDDAVKGPRPGVLVVHEWWGLNDYAKRRARDLAALGYSAMAIDMYGEGKNTEHPKDAMAFMQAALKDSDAADKRFDAGLEQLKKQPQTDLKKIAAIGYCFGGKIVLDAARRGEPLLGVVSFHGALVTNTPAKPGIKVPMLVEHGAKDSMVTAENVAAFKKEMDDAKADYKFVSIDGAKHGFTNPDADRLSHGDHGGPDIGYNKAADERSWADMKVFFKKIFG
>NZ_CP020351.1|WP_002554630.1|4449293_4449644_-|hypothetical-protein
MLNLNKFFLALAFLGGSAAAQAGDGRLDVARIEFGKTSERLDDANSWGHALGEQAHTNVSVGTLYSPPVYGTLTGTHNGVPVSREILLGSYDVTQHVPVSARLLSTDATMSFHSLS
>NZ_CP020351.1|WP_002554629.1|4448588_4449266_-|response-regulator
MKLLVVEDEALLRHHLRTRLTEAGHVVEAVANAEEALYQVTQFNHDLAVIDLGLPGIGGLDLIRQLRTVGKAFPILILTARGNWQDKVEGLAAGADDYVVKPFQFEELEARLNALLRRSSGFIQSTITAGPLLLDLNRKHAALAEQPLALTAYEYRILEYLMLHHQQVVPKERLMEQLYPDDDERDPNVIEVLVGRLRRKLDSNVAFKPIETVRGMGYLFNERCT
>NZ_CP020351.1|WP_004665996.1|4447245_4448592_-|two-component-sensor-histidine-kinase
MIRSLRLRLMLGAATLAVIFMLLMLPALQGAFSLALRGAIEQRLASDVTTMISAARVEDGHLLMPSVLPGEQFNLPGSRLLGYIYNRQGQMVWRSLSTEGENIDYRPQYDGQGSEFTKIKEINGDEYFVYDVEIRLLGGRNAAFSIVAVQPLRGYQETIDGLRRKLYLGFGAALAVLLGLLWMGLTWGLRALRGLSQELDQVEAGVRDSLSEEHPSELLRLTDSLNRLLRSEREQRIRYRDSLDDLAHSLKTPLAVLQGVSENIAKRPEDVEQAWVLQSQIERMSQQIGYQLQRASLRKSGLVRHHVMLRPVVESLCNTLDKVYRDKQVKATLDLPEHCQVHMEEGALLEMLGNLLENAYRLCLSEVRVSFTRSADGDELCVEDDGPGVPQSQRARILERGERLDRQNPGQGIGLAVVKDIIESYGAQLTLGDSPLGGAAFRIHFLAQ
>NZ_CP020351.1|WP_080164738.1|4459898_4461146_+|ribonucleotide-diphosphate-reductase-subunit-beta
MLSWDEFDKEDGEVVAKATNAGHANEANMDRLDSAGGLAAQEARAVTAADSAALIRAKKALDALDVAEGLAELEGTSARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD
>NZ_CP020351.1|WP_007247761.1|4461614_4462592_+|IS5-family-transposase
MQKTFSELEYTGKKKQTRRDRFLADLEQLVPWALLEAQVAPFYSNTAGKRGRPAIGVSRMLRMYVVQQCFGFSDEGCEDAVYDSQAIRGFMGIDLGRESAPDATTLLRFRRLLEVHQLTRLLFETINQHLASRGLLLKEGTIVDATLIAAPPSVKNREGKRDPEMHQARKGNQWHFGMKAHIGVDATSGLVHSVVGTAANVADVTQVGQLLHGDETYVSGDAGYTGAAKRPEHAERDVIWSIAERPSSYKQHGEGSVLYRVKRKIEYAKAQLRAKVEHPFQVIKVRFNHRKVRYRGLEKNTAQLFSLFGLANLMLAKRYLQQTAG
>NZ_CP020351.1|WP_007247761.1|4462827_4463805_+|IS5-family-transposase
MQKTFSELEYTGKKKQTRRDRFLADLEQLVPWALLEAQVAPFYSNTAGKRGRPAIGVSRMLRMYVVQQCFGFSDEGCEDAVYDSQAIRGFMGIDLGRESAPDATTLLRFRRLLEVHQLTRLLFETINQHLASRGLLLKEGTIVDATLIAAPPSVKNREGKRDPEMHQARKGNQWHFGMKAHIGVDATSGLVHSVVGTAANVADVTQVGQLLHGDETYVSGDAGYTGAAKRPEHAERDVIWSIAERPSSYKQHGEGSVLYRVKRKIEYAKAQLRAKVEHPFQVIKVRFNHRKVRYRGLEKNTAQLFSLFGLANLMLAKRYLQQTAG
>NZ_CP020351.1|WP_007247761.1|4464040_4465018_+|IS5-family-transposase
MQKTFSELEYTGKKKQTRRDRFLADLEQLVPWALLEAQVAPFYSNTAGKRGRPAIGVSRMLRMYVVQQCFGFSDEGCEDAVYDSQAIRGFMGIDLGRESAPDATTLLRFRRLLEVHQLTRLLFETINQHLASRGLLLKEGTIVDATLIAAPPSVKNREGKRDPEMHQARKGNQWHFGMKAHIGVDATSGLVHSVVGTAANVADVTQVGQLLHGDETYVSGDAGYTGAAKRPEHAERDVIWSIAERPSSYKQHGEGSVLYRVKRKIEYAKAQLRAKVEHPFQVIKVRFNHRKVRYRGLEKNTAQLFSLFGLANLMLAKRYLQQTAG
>NZ_CP020351.1|WP_004663854.1|4465224_4466328_+|IS5-like-element-ISPsy19-family-transposase
MPKTGRPRSIAAEHYPVLVKLAHAQPYSSQAELALVFFAETGITAHPDTFAKALKMAGITRVKQRAKGSFQSPEPNKAYGYNETHRRQLPEQLYPSCLTDTEWALVADLFESQGGRGVPPLHSRRTLLEACCYVVRTGCSWRMLPRDFPHWDNVYKTFRRWSAQGKFEQMHDRLRAQWREREERADSPSAAILDSQSTRSSPQGGDSGYDAGKKVKGRKRSLIVDTLGLLLAVSISAASVQDRDAADDAVAYSKEKYPSLSTLFVDSAYAGKWAQRTHQLHAIDVQVIRGPNNRRTGQWHSEQGDLFSVEPVQTGFVVMPKRWVVERTHAWNERARRLIMHHDRLFAVSEAWVWLAEARILARRLTT
>NZ_CP020351.1|WP_007247761.1|4466434_4467412_+|IS5-family-transposase
MQKTFSELEYTGKKKQTRRDRFLADLEQLVPWALLEAQVAPFYSNTAGKRGRPAIGVSRMLRMYVVQQCFGFSDEGCEDAVYDSQAIRGFMGIDLGRESAPDATTLLRFRRLLEVHQLTRLLFETINQHLASRGLLLKEGTIVDATLIAAPPSVKNREGKRDPEMHQARKGNQWHFGMKAHIGVDATSGLVHSVVGTAANVADVTQVGQLLHGDETYVSGDAGYTGAAKRPEHAERDVIWSIAERPSSYKQHGEGSVLYRVKRKIEYAKAQLRAKVEHPFQVIKVRFNHRKVRYRGLEKNTAQLFSLFGLANLMLAKRYLQQTAG
>NZ_CP020351.1|WP_005746236.1|4468213_4469779_-|methyl-accepting-chemotaxis-protein
MRVNMPITQTERTFPASERLISTTDLNSHITYCNDAFVALSGFTREELVGQPHNLVRHPDMPASVFAHMWETIKQGKPWMGVVKNRSKQGDYYWVSAYVTAVYENGRIVGYESVRSLPTRDQVRRAEALYARLRAGKSAVSATSSAAYHLVRQLPMILCALALAVGVYLLDDLPSIIMIPIVMVVLGGFLEMRQRRSIRNTLEEHPKAFTSSLVALTYSDNRGPQAQLDLAMLSEEARLQTALTRLADTGESVRQHAGRSAQLSLRQAESLDQQRSEADQSATAINQMAATIQEVTHNVQNTAHAAEEADKLAQQGRGLADESLLAIRHMANSVTDIGNAVGELASATQSIGSVVDVITSIAQQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQSSTEQIQQIITSLRDGADRAVQTANKGEQISQESVASVEAVQKALDGISQSVTRITGMSQQMASASEEQSHVAENISQQITRIAQLCDESASQAQQGSQISGELEEMAQYLHSLAERFSR
>NZ_CP020351.1|WP_005746237.1|4470029_4470380_+|topoisomerase
MARNTTSALAALIRIFRRLLSRVAGQTADQQQHVQPTKPAAHSPQPQKPVKTSRAKRPEKRREPATPKLPAKPAAPACPHCKKTMVIKVARTGKNAGEFWGCVAYPKCRGIRPIFR
>NZ_CP020351.1|WP_005746238.1|4470419_4472627_-|peptidoglycan-binding-protein-LysM
MLKSSLAAVEGAGRRARGVFCKSVIAASLLACSTLASALGLGEITLHSALNQPLNAEIQLLETGGLSNEDVVARLASPEAFAKAGIERVFFLNDLRFTPVLRGDRGVIRVVSTKPVTEPYLSFLVQLARPNGDLLHEYTVLLDPATSPQGLAATRSRNTQRSTASAQESRMPVAPPAAVQGKHYTVANGDTLNGIASRLQGPGNKVSASQLADGIRLLNPQAFAAGAGSALKVGQDLLLPDSAILPSAAAPVASPEASSPKPAELQRTAEQLSAAAIENQQLAQSLEALKAQTQELQEQMSGKDKQITALRSDLAVAQSAARPATPAAPAMTPATPAQPAAAPTPGTDSFLSLPILLAAVLIVLLLVAFAYSRRRQQRKQSAAPAVAPDEQLIKPAQATMLPVFEVPAVAPQPVVQPPPTPAATKPPAAQRSAGSTPDALDGVSIYIAYGRFTEAMGILRSALEKQPERDDIRIRLLELLAEQGDGSGFVREEQSALEHGVDPQTIQDIRDRFPQIKAAEVAPVAAVVPAAAVAATTLSFEKTEPEPESAAYLQPDLEPEPAAQLDETAAAALNPQDEFQLNLDDLSMDADWDLVDPFDSPPPRIKPAAATAAPAPADVDPGFSSDLTQLPEVFELSDEQFLSDFSEPDVIEPIEVVAPAAADDLSDDFLDSFMSDDAEFDLLDLEEPPLSQINQAQVLIEEGDLESAREILQQVIAESDEEHRRMARELLAGIS
>NZ_CP020351.1|WP_002552570.1|4472722_4473157_-|MarR-family-transcriptional-regulator
MPLTDEHRFGMQLGHLTRGWRAELDRRLADLGLSQARWLVLLHLARFTEPPTQRELAQSVGVEGPTLARLLDSLEKQGLVQRQAVVEDRRAKKILLSDTALPLIEKIETIANVLRIELFEGVSEEDLRVSMRVHSQILANLERS

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Crispr_ID: NZ_CP020351_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020351_3

5673922-5674001

Orphan

Consensus_repeat	Method
GAGCGTCGCACGATAGTCGAGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020351_3

>merge|NZ_CP020351|3|5673922-5674001|CRISPRCasFinder
GAGCGTCGCACGATAGTCGAGATCTTCTCCCCGCCGCCTGTTCAAGATCGGACGCAGAGCGTCGCACGATAGTTGAGATC

>NZ_CP020351|3|2|5673922-5674001|CRISPRCasFinder
GAGCGTCGCACGATAGTCGAGATC	TTCTCCCCGCCGCCTGTTCAAGATCGGACGCA
GAGCGTCGCACGATAGTTGAGATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020351.1\|WP_005745063.1\|5682574_5683942_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NZ_CP020351.1\|WP_005745052.1\|5666963_5667419_-\|tRNA-(cytidine(34)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|223297
NZ_CP020351.1\|WP_039847355.1\|5668205_5669030_-\|taurine-ABC-transporter-permease-TauC	unknown	unknown	gnl\|CDD\|182276
NZ_CP020351.1\|WP_002555767.1\|5681146_5682505_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP020351.1\|WP_004655058.1\|5669888_5670866_-\|taurine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226904
NZ_CP020351.1\|WP_010195713.1\|5676083_5676896_+\|aliphatic-sulfonates-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183055
NZ_CP020351.1\|WP_004655063.1\|5667417_5667858_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020351.1\|WP_044295144.1\|5677271_5678318_+\|RHS-repeat-associated-core-domain-containing-protein	unknown	unknown	gnl\|CDD\|274730
NZ_CP020351.1\|WP_005745055.1\|5671637_5672984_+\|outer-membrane-porin,-OprD-family	unknown	unknown	gnl\|CDD\|335381
NZ_CP020351.1\|WP_002551468.1\|5666405_5666894_+\|protein-export-chaperone-SecB	unknown	unknown	gnl\|CDD\|180234
NZ_CP020351.1\|WP_003413528.1\|5679176_5680553_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP020351.1\|WP_002555773.1\|5674295_5675261_+\|sulfonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270275
NZ_CP020351.1\|WP_004655051.1\|5675289_5676087_+\|aliphatic-sulfonate-ABC-transporter-permease-SsuC	unknown	unknown	gnl\|CDD\|183100
NZ_CP020351.1\|WP_004655053.1\|5673153_5673792_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239314
NZ_CP020351.1\|WP_004663257.1\|5684082_5685180_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP020351.1\|WP_002555770.1\|5676922_5677138_+\|TOBE-domain-containing-protein	unknown	unknown	gnl\|CDD\|226113
NZ_CP020351.1\|WP_002551466.1\|5665697_5666111_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP020351.1\|WP_002551467.1\|5666113_5666365_+\|glutaredoxin-3	unknown	unknown	gnl\|CDD\|274017
NZ_CP020351.1\|WP_005745054.1\|5669077_5669863_-\|taurine-ABC-transporter-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|183056
NZ_CP020351.1\|WP_004655040.1\|5678324_5678957_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228

Protein	Function_ID	Function_description	E-value
NZ_CP020351.1\|WP_005745063.1\|5682574_5683942_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NZ_CP020351.1\|WP_005745052.1\|5666963_5667419_-\|tRNA-(cytidine(34)-2'-O)-methyltransferase	gnl\|CDD\|223297	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis].	1.10019e-87
NZ_CP020351.1\|WP_039847355.1\|5668205_5669030_-\|taurine-ABC-transporter-permease-TauC	gnl\|CDD\|182276	PRK10160, PRK10160, taurine ABC transporter permease TauC.	5.26182e-118
NZ_CP020351.1\|WP_002555767.1\|5681146_5682505_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	3.38043e-153
NZ_CP020351.1\|WP_004655058.1\|5669888_5670866_-\|taurine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|226904	COG4521, TauA, ABC-type taurine transport system, periplasmic component [Inorganic ion transport and metabolism].	1.34011e-151
NZ_CP020351.1\|WP_002555770.1\|5676922_5677138_+\|TOBE-domain-containing-protein	gnl\|CDD\|226113	COG3585, MopI, Molybdopterin-binding protein [Coenzyme metabolism].	1.14695e-16
NZ_CP020351.1\|WP_010195713.1\|5676083_5676896_+\|aliphatic-sulfonates-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183055	PRK11247, ssuB, aliphatic sulfonates transport ATP-binding subunit; Provisional.	2.1761e-172
NZ_CP020351.1\|WP_044295144.1\|5677271_5678318_+\|RHS-repeat-associated-core-domain-containing-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	2.51718e-29
NZ_CP020351.1\|WP_005745055.1\|5671637_5672984_+\|outer-membrane-porin,-OprD-family	gnl\|CDD\|335381	pfam03573, OprD, outer membrane porin, OprD family. This family includes outer membrane proteins related to OprD. OprD has been described as a serine type peptidase. However the proposed catalytic residues are not conserved suggesting that many of these proteins are not peptidases.	1.98018e-137
NZ_CP020351.1\|WP_002551468.1\|5666405_5666894_+\|protein-export-chaperone-SecB	gnl\|CDD\|180234	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated.	2.01361e-82
NZ_CP020351.1\|WP_003413528.1\|5679176_5680553_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	2.39638e-154
NZ_CP020351.1\|WP_002555773.1\|5674295_5675261_+\|sulfonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270275	cd13557, PBP2_SsuA, Substrate binding domain of sulfonate binding protein, a member of the type 2 periplasmic binding fold superfamily. This subfamily includes the sulfonate binding domains SsuA found in eubacterial SsuA proteins that serve as initial receptors in the ABC transport of bicarbonate, nitrate, taurine, or a wide range of aliphatic sulfonates, while other closest homologs are involved in thiamine (vitamin B1) biosynthetic pathway and desulfurization (DszB). After binding the ligand, SsuA interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The SsuA proteins belong to the PBPII superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	8.6885e-145
NZ_CP020351.1\|WP_004655051.1\|5675289_5676087_+\|aliphatic-sulfonate-ABC-transporter-permease-SsuC	gnl\|CDD\|183100	PRK11365, ssuC, aliphatic sulfonate ABC transporter permease SsuC.	4.68211e-137
NZ_CP020351.1\|WP_004655053.1\|5673153_5673792_+\|peroxiredoxin	gnl\|CDD\|239314	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes and lung. The seed-specific plant 1-cys PRXs protect tissues from reactive oxygen species during desiccation and are also called rehydrins.	8.94033e-132
NZ_CP020351.1\|WP_004663257.1\|5684082_5685180_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP020351.1\|WP_002551466.1\|5665697_5666111_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	1.87715e-25
NZ_CP020351.1\|WP_002551467.1\|5666113_5666365_+\|glutaredoxin-3	gnl\|CDD\|274017	TIGR02181, GRX_bact, Glutaredoxin, GrxC family. Glutaredoxins are thioltransferases (disulfide reductases) which utilize glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system. Glutaredoxins utilize the CXXC motif common to thioredoxins and are involved in multiple cellular processes including protection from redox stress, reduction of critical enzymes such as ribonucleotide reductase and the generation of reduced sulfur for iron sulfur cluster formation. Glutaredoxins are capable of reduction of mixed disulfides of glutathione as well as the formation of glutathione mixed disulfides. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides. [Energy metabolism, Electron transport].	3.74372e-49
NZ_CP020351.1\|WP_005745054.1\|5669077_5669863_-\|taurine-ABC-transporter-ATP-binding-subunit	gnl\|CDD\|183056	PRK11248, tauB, taurine ABC transporter ATP-binding subunit.	1.78983e-168
NZ_CP020351.1\|WP_004655040.1\|5678324_5678957_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	5.42606e-09

>NZ_CP020351.1|WP_004655053.1|5673153_5673792_+|peroxiredoxin
MTLRLGDIAPDFEQESSEGRIRFHEWLGDSWGVLFSHPADFTPVCTTELGFTAKLKDEFAKRGVKAIALSVDPVDSHIKWIDDINTTQNTQVNFPILADADRKVSDLYDLIHPNASDTLTVRSLFVIDPKKKVRLTITYPASTGRNFHEILRVIDSLQLTDNYKVATPANWVDGDDVVIVPSIKDEAEIKERFPKGYKAVTPYLRLTPQPNR
>NZ_CP020351.1|WP_005745055.1|5671637_5672984_+|outer-membrane-porin,-OprD-family
MKKSTLALAVTVAALAQQAGAAGFLEDSKASVSSRTLYFNNDLREGVRASDQRETATGLKFDYLSGFTQGTVGFGLDAQAVMGLHLGGDIQHHTVNTANTVVPTDTDGSSVSDWSRVGANAKMRFSKTELKVGNALAPNLPILVSNDGRLLPQAFEGGILTSKDLDSVTFTAGQLNKSIGRASSNWTDLSVAGATQGSDQFRFAGADWKVTKDLTLQYYYANLEDFYKQHFLGLVHVYPISDNQSFKTDLRYFNSSADGKNSQAAAGYRFNNNGGYASHTGEVDNQTWSAMFTYSLGGHALMVGHQQVGDSGGMVYLGQGNVVDGRGRPEGNGGSSFYLFTDSMINGFNRAGENTTFGQYSYDFAKVGVPGLKAAIAYLSGDDIRDVNRNLGTHSEWERDMRVDYVIQSGVLKGFGTTVRHGTFRGDVATTADTDQTRILFNYTYNFL
>NZ_CP020351.1|WP_004655058.1|5669888_5670866_-|taurine-ABC-transporter-substrate-binding-protein
MKLHFSLRLLTALSLTGATFIAQAADFTVAYQTTVDPAKVAQADNAYEKATDSKISWRKFDNGADVITAIASGDVQIGYLGSSPFTAAATRKLPVETFLIATQIGAAEALVARNGSGINSPQDLIGKKVAVPFVSTGHYSLLAALKHWNIDPARVTILNLAPPAIAAAWKRGDIDATYVWDPALGVAKETGKVLITSGELAKVGAPTFDAWIVRKDFANKHPEVVSAFAKVTLDAYARYRQDPAAWIANPANVDKLTRLSGAKASDVPGLLQGNVYPLAAEQTALLGTPTIEAVTKTAAFLKEQGKVDAVLPDYSPYVSARFIPR
>NZ_CP020351.1|WP_005745054.1|5669077_5669863_-|taurine-ABC-transporter-ATP-binding-subunit
MALLQLERIGAQYPGAAAPVLADINLSLGPQQLLVALGPSGSGKTSLLNLIAGFIKPGSGRITLDGIPVEGPSAERGVVFQDDALLPWQNVLANVAFGLELAGVDRLERETRAREMLALVDLAGFDQRRIWQLSGGQRQRVGLARALAADPRILLMDEPFGALDAFTREQMQELLLQVWQRTAKPVFLITHDIEEAVFLATDLVLLAPNPGRIAEHLHLDFGRRYAAGESARAIKSDPRFIETREHVLASVFSQRTREQRV
>NZ_CP020351.1|WP_039847355.1|5668205_5669030_-|taurine-ABC-transporter-permease-TauC
MTGISKPFAKQPAAPTPKVYLSTRAISILTLVALLTLWWAITAGGWIEPLFLPPPADVLSKGWLLATKGYMDATLWQHLDASLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSKVLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQLIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIAATSGLGFMVQSAAQFLVTDVVVLGILVIAVIAFAMELGLRALQRRLVPWHGQQH
>NZ_CP020351.1|WP_004655063.1|5667417_5667858_+|hypothetical-protein
MHGSERKDGMHSTPEEDPRPKLWPRVLGSMAIVGFTVGTIIGRLQQPDPVELEQIEELPAGLALWFNEEPKYQGSTVDGAVVLNVDASGRPWTGQLRFDNRVARWKVERGEKGLVLTLLAARPLHGDWRTEKVDGRWRLEVSLREE
>NZ_CP020351.1|WP_005745052.1|5666963_5667419_-|tRNA-(cytidine(34)-2'-O)-methyltransferase
MFHVILFQPEIPPNTGNVIRLCANSGCTLHLIEPLGFELDDKRLRRAGLDYHEYATLQTHPDLASCMEKIGNPRLFAFTTKGSRPFHDASFEPDDAFLFGPESRGLPADILDSLSSEHRLRLPMREGCRSLNLSNTVAVAVYEAWRQHGFA
>NZ_CP020351.1|WP_002551468.1|5666405_5666894_+|protein-export-chaperone-SecB
MTDQPNNGAVANEENGPQFSLQRIYVRDLSFEAPKSPAIFRQEWTPTVSLDLNTRQKQLEGDFYEVVLTLSVTVNNGDEVAFIVEVQQAGIFLIKGLDDGAMSHTLGAFCPNILFPYAREAIDNLVVRGSFPALMLAPVNFDALYAQELQRMQEAGETPTVQ
>NZ_CP020351.1|WP_002551467.1|5666113_5666365_+|glutaredoxin-3
MAQVIVYSSDYCPYCIRAKQLLQSKSVAFEEIRVDGKPQLRAEMTKKAGRTSVPQIWIGSTHVGGCDDLFALERAGKLDALLA
>NZ_CP020351.1|WP_002551466.1|5665697_5666111_+|rhodanese-like-domain-containing-protein
MVAHLLEFATNHYLITGAFVILLGLLIAYELSKGGASLSTRELTALVNSDQGVVIDVRSKKDFTAGHIVGSLNFPQDKVLTRTAELQKYKDKTLIIVDAMGQHAGTTARELLKSGFKAAKLSGGISSWRGDNLPLVK
>NZ_CP020351.1|WP_002555773.1|5674295_5675261_+|sulfonate-ABC-transporter-substrate-binding-protein
MRTVILRRGLVALFAAAVALGAVTQAQAEDLRIGYQKYGTLVLLKAKGSLEKRLAEQGVKVQWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAPTSEAILVPKDSPITSVKDLKGKKVVLNKGSNVHYLLVKALEDAGLKYTDIQTVFLPPADARAAFERGSVDAWVIWDPYQAAAEKQLQARTLKDGTGIVDNHQFYLATKPYAQKNPKVIQALIEEVRAVGEWSKAHPDEVTKQVAPLLGLPADITLTSVKRQGYGALFITPPVVAAQQKIADTFYQLKLIPKPLSIADVVWTPPAAVAQAQ
>NZ_CP020351.1|WP_004655051.1|5675289_5676087_+|aliphatic-sulfonate-ABC-transporter-permease-SsuC
MSLSASQRIIHRLAPWALPVLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRAGIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWLTLIVAETISASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARGLERVCLRWHPAYQVSKGGAA
>NZ_CP020351.1|WP_010195713.1|5676083_5676896_+|aliphatic-sulfonates-ABC-transporter-ATP-binding-protein
MTSLKQQPPHLLRGIPLAVRNLKKAFGTREVLKDIDLHIPAGQFVAIVGRSGCGKSTLLRLLAGLDKPTEGQLLAGSAPLDDAREDTRLMFQEARLLPWKKIIDNVGLGLSGDWRAQALEALEAVGLAERANEWPAALSGGQKQRVALARALIHKPRLLLLDEPLGALDALTRIEMQQLIEKLWGQYGFTVLLVTHDVSEAVAIADRVILIEEGQIGLDLLVDLPRPRVRGSHRLAALEAEVLNRVLALPGSPPDPEPFSPLPTQLRWAN
>NZ_CP020351.1|WP_002555770.1|5676922_5677138_+|TOBE-domain-containing-protein
MTIKAINVRNQFKGTIKEIVHGDVLSEIDVQTASGVVTSVITTRSVKELELVVGSEVIAFVKSTEVSIAKL
>NZ_CP020351.1|WP_044295144.1|5677271_5678318_+|RHS-repeat-associated-core-domain-containing-protein
MTSSAQAVLCRYRYDPLDRLASSSPVRQEDIQRFYRKNVLATEIQGALRSTVFQHEDRLLAQQRHVDDLVDTTLLATDQQRSVLQLVDNTGVESMAYSVYGHHPAESGLTSLLGFNGERRDPATGHYLLGNGYRAYNPVLMRFNSPDSLSPFGEGGLNAYGYVGGDPVGFGDPSGHISAGLLDKLLRAGIIILAPKKIPLSQLPGMVDELPYSSATVSSTPSLPIASSTGVGLASKSSISSSSVDPSAGGTLKSMIRNYKEKRENFNRFYKSGAAGQRKADVLKLAETTFREELDVTVKALEVMEASKGTSAFDPERYNILNARFIERKRKYSKRFTPYHEGVKKIRE
>NZ_CP020351.1|WP_004655040.1|5678324_5678957_-|TetR/AcrR-family-transcriptional-regulator
MTRAATPRKPQARSQARIDSILDAARTLLAEQGVASLSIYSVAERAGIPPSSVYHFFASVPALLEALTADIHAAFRASLQAPIDHDQLTTWRDLSRIVELRMLAIYNADAAARQLILAQHGLTEINQADRQHDIELGHLMLEVFDRHFQLPALPDDVDVFALAMELGDRVYARSVQLHDEITPRMAEEGMRVFDAYLGLYLPMFLVKRVI
>NZ_CP020351.1|WP_003413528.1|5679176_5680553_-|glutamine-synthetase
MSVPPRAVQLNEANAFLKEHPEVLYVDLLIADMNGVVRGKRIERTSLHKVYEKGINLPASLFALDINGSTVESTGLGLDIGDADRICYPIPDTLCNEPWQKRPTAQLLMTMHELEGDPFFADPREVLRQVVAKFDEMGLTICAAFELEFYLIDQENVNGRPQPPRSPISGKRPHSTQVYLIDDLDEYVDCLQDILEGAKEQGIPADAIVKESAPAQFEVNLHHVADAIKACDYAVLLKRLIKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISILDRDGKNIFTSEDPEQNAALRHAIGGVLETLPAQMAFLCPNVNSYRRFGAQFYVPNSPTWGLDNRTVAVRVPTGTADAVRIEHRVAGADANPYLVMASVLAGVHHGLVNKVEPGAPVEGNSYEQHEQSLPNNLRDALRELDDNPVMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
>NZ_CP020351.1|WP_002555767.1|5681146_5682505_+|glutamine-synthetase
MSTNLDQLTDWLKEHKITEVECMMSDLTGITRGKISPTNKFIAEKGMRLPESVLLQTVTGDYVEDDIYYELLDPADIDMICRPDQNAVYLVPWAVEPTAQVIHDTYDKQGNPIELSPRNVLKKVLKLYADQGWQPIVAPEMEFYLTKRSDDPDYPLQPPIGRSGRPETGRQSFSIEAANEFDPLFEDVYDWCELQNLDLDTLIHEDGTAQMEINFRHGDALSLADQILVFKRTMREAALKHDVAATFMAKPMTGEPGSAMHLHQSIIDIETGKNIFSNEDGTMSELFLNHVGGLQKFIPELLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPDAVPQNRRVENRLPGADANPYLAIAASLLCGFIGMVEGINPSAPVVGRGYERRNLRLPLTIEDALERMENSKTIEKYLGKKFIIGYVAVKRAEHENFKRVISSWEREFLLFAV
>NZ_CP020351.1|WP_005745063.1|5682574_5683942_+|aspartate-aminotransferase-family-protein
MSAHNNPQTLEWQALSSEHHLAPFSDYKQLKEKGPRIITRAEGVYLWDSEGNKILDGMSGLWCVAIGYGREELADAASKQMRELPYYNLFFQTAHPPVLELAKAISEIAPQGMNHVFFTGSGSEGNDTMLRMVRHYWALKGQPDKKTIISRVNGYHGSTVAGASLGGMTYMHEQGDLPIPGVVHIPQPYWFGEGGDMTPDEFGVWAAEQLEKKIIELGVENVGAFIAEPIQGAGGVIVPPDSYWPKIKEILSRYDILFAADEVICGFGRTSEWFGSDFYGLKPDMMTIAKGLTSGYVPMGGLIVRDEIVAVLNEGGDFNHGFTYSGHPVAAAVALENIRILREEKIVERVKSETAPYLQKRLRELSDHPLVGEVRGAGLLGAIELVKDKVTRERYTDKGAGMICRTFCFDNGLIMRAVGDTMIIAPPLVISFAEIDELVEKARKCLDLTLAVLQG
>NZ_CP020351.1|WP_004663257.1|5684082_5685180_+|polyamine-ABC-transporter-substrate-binding-protein
MKKFGKTLLALSLMGVVAAAAQADDKVLHVYNWSDYIAPDTVAKFEKESGIKVVYDVFDSNETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYQELDKSKLPNWKNLNESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKLKSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDLANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAYKFMTFLMKPEIMAEITNAVRFPNGNAAATALVDKEITSDPGVYPPADVQAKLYAIADLPAATQRIMTRSWTKIKSGK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP020351_1	1.1\|908129\|18\|NZ_CP020351\|CRT	908129-908146	18	NZ_CP020351.1	1865829-1865846	0	1.0
NZ_CP020351_1	1.1\|908129\|18\|NZ_CP020351\|CRT	908129-908146	18	NZ_CP020351.1	1866117-1866134	0	1.0
NZ_CP020351_1	1.1\|908129\|18\|NZ_CP020351\|CRT	908129-908146	18	NZ_CP020351.1	1866585-1866602	0	1.0
NZ_CP020351_1	1.1\|908129\|18\|NZ_CP020351\|CRT	908129-908146	18	NZ_CP020351.1	1866873-1866890	0	1.0
NZ_CP020351_1	1.1\|908129\|18\|NZ_CP020351\|CRT	908129-908146	18	NZ_CP020351.1	1866333-1866350	1	0.944
NZ_CP020351_1	1.1\|908129\|18\|NZ_CP020351\|CRT	908129-908146	18	NZ_CP020351.1	1866657-1866674	1	0.944
NZ_CP020351_1	1.2\|908165\|18\|NZ_CP020351\|CRT	908165-908182	18	NZ_CP020351.1	3871709-3871726	1	0.944
NZ_CP020351_1	1.9\|908417\|18\|NZ_CP020351\|CRT	908417-908434	18	NZ_CP020351.1	3871709-3871726	1	0.944

1. spacer 1.1|908129|18|NZ_CP020351|CRT matches to position: 1865829-1865846, mismatch: 0, identity: 1.0

cccagatcgatggccgga	CRISPR spacer
cccagatcgatggccgga	Protospacer
******************

2. spacer 1.1|908129|18|NZ_CP020351|CRT matches to position: 1866117-1866134, mismatch: 0, identity: 1.0

cccagatcgatggccgga	CRISPR spacer
cccagatcgatggccgga	Protospacer
******************

3. spacer 1.1|908129|18|NZ_CP020351|CRT matches to position: 1866585-1866602, mismatch: 0, identity: 1.0

cccagatcgatggccgga	CRISPR spacer
cccagatcgatggccgga	Protospacer
******************

4. spacer 1.1|908129|18|NZ_CP020351|CRT matches to position: 1866873-1866890, mismatch: 0, identity: 1.0

cccagatcgatggccgga	CRISPR spacer
cccagatcgatggccgga	Protospacer
******************

5. spacer 1.1|908129|18|NZ_CP020351|CRT matches to position: 1866333-1866350, mismatch: 1, identity: 0.944

cccagatcgatggccgga	CRISPR spacer
cccagatcggtggccgga	Protospacer
*********.********

6. spacer 1.1|908129|18|NZ_CP020351|CRT matches to position: 1866657-1866674, mismatch: 1, identity: 0.944

cccagatcgatggccgga	CRISPR spacer
cccagatcggtggccgga	Protospacer
*********.********

7. spacer 1.2|908165|18|NZ_CP020351|CRT matches to position: 3871709-3871726, mismatch: 1, identity: 0.944

gccagctcggcgtccgga	CRISPR spacer
gccagctcggcgtccaga	Protospacer
***************.**

8. spacer 1.9|908417|18|NZ_CP020351|CRT matches to position: 3871709-3871726, mismatch: 1, identity: 0.944

gccagctcggcgtccgga	CRISPR spacer
gccagctcggcgtccaga	Protospacer
***************.**

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP020351_3	3.1\|5673946\|32\|NZ_CP020351\|CRISPRCasFinder	5673946-5673977	32	NC_017536	Oligotropha carboxidovorans OM4 plasmid pHCG3B, complete sequence	81080-81111	9	0.719
NZ_CP020351_3	3.1\|5673946\|32\|NZ_CP020351\|CRISPRCasFinder	5673946-5673977	32	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	203166-203197	9	0.719
NZ_CP020351_3	3.1\|5673946\|32\|NZ_CP020351\|CRISPRCasFinder	5673946-5673977	32	NC_015689	Oligotropha carboxidovorans OM5 plasmid pHCG3, complete sequence	81082-81113	9	0.719
NZ_CP020351_3	3.1\|5673946\|32\|NZ_CP020351\|CRISPRCasFinder	5673946-5673977	32	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	129100-129131	9	0.719
NZ_CP020351_3	3.1\|5673946\|32\|NZ_CP020351\|CRISPRCasFinder	5673946-5673977	32	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	164167-164198	10	0.688
NZ_CP020351_3	3.1\|5673946\|32\|NZ_CP020351\|CRISPRCasFinder	5673946-5673977	32	NZ_CP016289	Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence	419013-419044	10	0.688
NZ_CP020351_3	3.1\|5673946\|32\|NZ_CP020351\|CRISPRCasFinder	5673946-5673977	32	NZ_CP016290	Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence	194177-194208	10	0.688
NZ_CP020351_3	3.1\|5673946\|32\|NZ_CP020351\|CRISPRCasFinder	5673946-5673977	32	NZ_CP016292	Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence	173398-173429	10	0.688
NZ_CP020351_3	3.1\|5673946\|32\|NZ_CP020351\|CRISPRCasFinder	5673946-5673977	32	NZ_CP026528	Sinorhizobium meliloti strain AK21 plasmid pSmeAK21a, complete sequence	124725-124756	10	0.688
NZ_CP020351_3	3.1\|5673946\|32\|NZ_CP020351\|CRISPRCasFinder	5673946-5673977	32	NZ_CP050090	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b4, complete sequence	70837-70868	10	0.688

1. spacer 3.1|5673946|32|NZ_CP020351|CRISPRCasFinder matches to NC_017536 (Oligotropha carboxidovorans OM4 plasmid pHCG3B, complete sequence) position: , mismatch: 9, identity: 0.719

ttctccccgccgcctgttcaagatcggacgca	CRISPR spacer
ggccgcccgccgcctgttcgagaacggaatcc	Protospacer
  *. **************.*** ****  *

2. spacer 3.1|5673946|32|NZ_CP020351|CRISPRCasFinder matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 9, identity: 0.719

ttctccccgccgcctgttcaagatcggacgca	CRISPR spacer
tggcccccgccgccttttccagatcggcatcg	Protospacer
*  .*********** *** *******   *.

3. spacer 3.1|5673946|32|NZ_CP020351|CRISPRCasFinder matches to NC_015689 (Oligotropha carboxidovorans OM5 plasmid pHCG3, complete sequence) position: , mismatch: 9, identity: 0.719

ttctccccgccgcctgttcaagatcggacgca	CRISPR spacer
ggccgcccgccgcctgttcgagaacggaatcc	Protospacer
  *. **************.*** ****  *

4. spacer 3.1|5673946|32|NZ_CP020351|CRISPRCasFinder matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 9, identity: 0.719

ttctccccgccgcctgttcaagatcggacgca	CRISPR spacer
tggcccccgccgccttttccagatcggcgtcg	Protospacer
*  .*********** *** *******   *.

5. spacer 3.1|5673946|32|NZ_CP020351|CRISPRCasFinder matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ttctccccgccgcctgttcaagatcggacgca	CRISPR spacer
cacataaagccgcgtgttcgagatcggacgcc	Protospacer
. * .   ***** *****.***********

6. spacer 3.1|5673946|32|NZ_CP020351|CRISPRCasFinder matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

ttctccccgccgcctgttcaagatcggacgca	CRISPR spacer
cacataaagccgcgtgttcgagatcggacgcc	Protospacer
. * .   ***** *****.***********

7. spacer 3.1|5673946|32|NZ_CP020351|CRISPRCasFinder matches to NZ_CP016290 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

ttctccccgccgcctgttcaagatcggacgca	CRISPR spacer
cacataaagccgcgtgttcgagatcggacgcc	Protospacer
. * .   ***** *****.***********

8. spacer 3.1|5673946|32|NZ_CP020351|CRISPRCasFinder matches to NZ_CP016292 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

ttctccccgccgcctgttcaagatcggacgca	CRISPR spacer
cacataaagccgcgtgttcgagatcggacgcc	Protospacer
. * .   ***** *****.***********

9. spacer 3.1|5673946|32|NZ_CP020351|CRISPRCasFinder matches to NZ_CP026528 (Sinorhizobium meliloti strain AK21 plasmid pSmeAK21a, complete sequence) position: , mismatch: 10, identity: 0.688

ttctccccgccgcctgttcaagatcggacgca	CRISPR spacer
cacataaagccgcgtgttcgagatcggacgcc	Protospacer
. * .   ***** *****.***********

10. spacer 3.1|5673946|32|NZ_CP020351|CRISPRCasFinder matches to NZ_CP050090 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b4, complete sequence) position: , mismatch: 10, identity: 0.688

ttctccccgccgcctgttcaagatcggacgca	CRISPR spacer
cacataaagccgcgtgttcgagatcggacgcc	Protospacer
. * .   ***** *****.***********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

326024 : 355515

Bacteriophage(66.67%)

bacteriocin,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007247761.1\|326024_327002_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_005744786.1\|327113_327383_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_005744785.1\|327563_327836_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_005744783.1\|327832_328144_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_007247761.1\|328438_329416_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_046835116.1\|329542_330499_-	RHS repeat-associated core domain-containing protein	A0A1W5K0N1	Bacteriophage	3.5e-29	39.4
WP_005744781.1\|330569_331520_-	RHS repeat-associated core domain-containing protein	A0A1W5K0N1	Bacteriophage	2.8e-34	45.1
WP_005747748.1\|331631_331847_-	hypothetical protein	NA	NA	NA	NA
WP_157178048.1\|332097_332301_-	DUF1534 domain-containing protein	NA	NA	NA	NA
WP_005730944.1\|332332_333352_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005744777.1\|333390_334257_-	ABC transporter permease	NA	NA	NA	NA
WP_005744776.1\|334347_335229_-	ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	1.5e-05	25.0
WP_080164376.1\|335245_336142_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_044299401.1\|336361_339460_+	autotransporter domain-containing protein	NA	NA	NA	NA
WP_046835117.1\|339574_340801_-	MFS transporter	NA	NA	NA	NA
WP_046835118.1\|340917_342180_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_005744771.1\|342341_343124_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005744770.1\|343294_344245_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_005734806.1\|344325_344907_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_005744768.1\|345121_346405_-	MFS transporter	NA	NA	NA	NA
WP_005744766.1\|347039_348032_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_005744764.1\|348197_349436_-	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	NA	NA	NA	NA
WP_005744763.1\|349487_350675_-	2-octaprenyl-6-methoxyphenyl hydroxylase	NA	NA	NA	NA
WP_005734811.1\|350671_352006_-	Xaa-Pro aminopeptidase	NA	NA	NA	NA
WP_004655142.1\|352081_352636_-	YecA family protein	NA	NA	NA	NA
WP_004655143.1\|352786_352996_+	TIGR02449 family protein	NA	NA	NA	NA
WP_003317331.1\|352992_353322_+	cell division protein ZapA	NA	NA	NA	NA
WP_004666527.1\|353625_354237_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_004655149.1\|354282_354435_-	hypothetical protein	NA	NA	NA	NA
WP_080164367.1\|354537_355515_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

927656 : 979099

Bacillus_phage(30.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007247761.1\|927656_928634_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_005745444.1\|928907_930164_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_005745446.1\|930160_932299_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	7.7e-32	27.2
WP_005745447.1\|932310_933675_+	TolC family protein	NA	NA	NA	NA
WP_005745448.1\|933751_935368_+	hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA
WP_002553187.1\|935402_935627_-	hypothetical protein	NA	NA	NA	NA
WP_005745449.1\|935801_935978_-	hypothetical protein	NA	NA	NA	NA
WP_005745450.1\|936042_936240_-	hypothetical protein	NA	NA	NA	NA
WP_005745451.1\|936435_937599_-	M20 family metallopeptidase	NA	NA	NA	NA
WP_016981123.1\|937611_938367_-	hypothetical protein	NA	NA	NA	NA
WP_005745454.1\|938363_939479_-	phosphotriesterase-related protein	NA	NA	NA	NA
WP_005745456.1\|939475_940495_-	ABC transporter permease	NA	NA	NA	NA
WP_005745457.1\|940509_941286_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.0e-15	26.2
WP_005745458.1\|941297_942242_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005745459.1\|942500_943514_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_007247761.1\|944365_945343_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_161798111.1\|948096_948930_+	cellulase family glycosylhydrolase	NA	NA	NA	NA
WP_003430751.1\|949993_951070_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
WP_003371235.1\|951032_951566_-	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA
WP_003371237.1\|951562_952372_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_005745466.1\|952381_952921_-	purine-binding chemotaxis protein CheW	NA	NA	NA	NA
WP_005745467.1\|952957_954613_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	4.9e-10	29.8
WP_005745468.1\|954643_956746_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_005732323.1\|956792_957083_-	STAS domain-containing protein	NA	NA	NA	NA
WP_002553206.1\|957106_957475_-	response regulator	W8CYM9	Bacillus_phage	1.1e-15	37.9
WP_029240903.1\|957484_958699_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	3.4e-08	30.8
WP_005745472.1\|959269_960568_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_080164415.1\|960664_960772_-	DUF3094 family protein	NA	NA	NA	NA
WP_005745473.1\|960785_961319_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_003430735.1\|961315_961945_-	DUF1780 domain-containing protein	NA	NA	NA	NA
WP_005745476.1\|962035_962344_+	hypothetical protein	NA	NA	NA	NA
WP_109724149.1\|962353_962533_-	DUF1534 domain-containing protein	NA	NA	NA	NA
WP_005745477.1\|962544_962754_-	DNA gyrase inhibitor YacG	NA	NA	NA	NA
WP_005745478.1\|962750_963374_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_005745479.1\|963370_964243_-	prepilin peptidase	NA	NA	NA	NA
WP_005745480.1\|964244_965462_-	type II secretion system F family protein	NA	NA	NA	NA
WP_005745482.1\|965464_967159_-	type IV-A pilus assembly ATPase PilB	NA	NA	NA	NA
WP_005745483.1\|967384_967771_+	pilin	NA	NA	NA	NA
WP_007247761.1\|968116_969094_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_005741118.1\|969637_970651_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.3e-47	36.7
WP_080164860.1\|970678_971755_+	O-antigen ligase family protein	NA	NA	NA	NA
WP_046835325.1\|971867_973154_+	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_005745486.1\|973203_973749_-	DUF1523 family protein	A0A219UQV4	Bacillus_phage	5.4e-06	33.3
WP_005745488.1\|973868_974867_+	carboxylate--amine ligase	NA	NA	NA	NA
WP_005745489.1\|974921_976061_+\|protease	trypsin-like serine protease	W5SAB9	Pithovirus	4.1e-08	29.5
WP_005745490.1\|976127_977261_+	phosphoribosyltransferase	A0A172Q0Y1	Acinetobacter_phage	5.5e-29	28.3
WP_005745491.1\|977253_978012_+	hypothetical protein	NA	NA	NA	NA
WP_005745492.1\|978004_979099_+\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	2.3e-40	33.1

DBSCAN-SWA_3

1119316 : 1146323

Escherichia_phage(40.0%)

integrase,transposase

attL 1111053:1111067|attR 1126359:1126373

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1111053:1111067	attL	NA	NA	NA	NA
WP_054068140.1\|1119316_1120843_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	5.0e-126	50.7
WP_003344689.1\|1121109_1121391_-	DUF3077 domain-containing protein	NA	NA	NA	NA
WP_003319381.1\|1121387_1121669_-	hypothetical protein	NA	NA	NA	NA
WP_005747071.1\|1122279_1122888_-	hypothetical protein	NA	NA	NA	NA
WP_005747072.1\|1122884_1123166_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_044299930.1\|1123256_1124102_-	hypothetical protein	NA	NA	NA	NA
WP_005747075.1\|1124373_1125615_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAT5	uncultured_Caudovirales_phage	3.3e-75	40.0
WP_005747076.1\|1125973_1127095_-	hypothetical protein	NA	NA	NA	NA
1126359:1126373	attR	NA	NA	NA	NA
WP_005747077.1\|1127433_1129491_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_080164423.1\|1129854_1132077_+	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|1132116_1133094_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_007247761.1\|1133629_1134607_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_007247761.1\|1134842_1135820_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_080164425.1\|1136718_1138353_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_080164426.1\|1138349_1138547_-	hypothetical protein	NA	NA	NA	NA
WP_032711007.1\|1139432_1140203_-	hypothetical protein	NA	NA	NA	NA
WP_004642391.1\|1140576_1140795_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_005746229.1\|1141361_1142435_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.4e-97	53.1
WP_005746231.1\|1142434_1143340_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.4e-29	34.6
WP_005746232.1\|1143336_1144227_+	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	8.0e-108	66.6
WP_005746233.1\|1144261_1145191_+	glycosyltransferase	NA	NA	NA	NA
WP_007247761.1\|1145345_1146323_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1214951 : 1287780

Pseudomonas_phage(45.65%)

tail,protease,head,holin,portal,capsid,integrase,terminase

attL 1214819:1214842|attR 1254984:1255007

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1214819:1214842	attL	NA	NA	NA	NA
WP_005745586.1\|1214951_1215185_-	hypothetical protein	A0A2H4J5U9	uncultured_Caudovirales_phage	1.5e-18	73.1
WP_005745587.1\|1215286_1215529_-	hypothetical protein	NA	NA	NA	NA
WP_052308350.1\|1215518_1216019_-	HNH endonuclease	NA	NA	NA	NA
WP_005745589.1\|1216074_1216275_-	hypothetical protein	NA	NA	NA	NA
WP_005745591.1\|1216271_1216652_-	hypothetical protein	NA	NA	NA	NA
WP_005745593.1\|1216641_1216836_-	carbon storage regulator	A0A0U1UNS3	Pseudomonas_phage	5.0e-07	55.1
WP_005745595.1\|1216913_1217294_-	response regulator transcription factor	A0A1W6JTA9	Pseudomonas_phage	4.2e-18	47.2
WP_005745596.1\|1217380_1218133_-	helix-turn-helix domain-containing protein	A0A1W6JTC8	Pseudomonas_phage	4.4e-51	63.4
WP_080164431.1\|1218241_1218529_+	Cro/Cl family transcriptional regulator	NA	NA	NA	NA
WP_005745597.1\|1218665_1219001_+	hypothetical protein	NA	NA	NA	NA
WP_005745598.1\|1218997_1219369_+	hypothetical protein	NA	NA	NA	NA
WP_005745599.1\|1219365_1219611_+	hypothetical protein	NA	NA	NA	NA
WP_005745600.1\|1219607_1220330_+	hypothetical protein	A0A1W6JTB2	Pseudomonas_phage	1.6e-37	44.3
WP_005745602.1\|1220326_1220917_+	hypothetical protein	NA	NA	NA	NA
WP_005745604.1\|1220913_1221741_+	helix-turn-helix domain-containing protein	A0A1W6JTD5	Pseudomonas_phage	1.2e-46	58.8
WP_080164432.1\|1221737_1222526_+	ATP-binding protein	A0A0A0YRV1	Pseudomonas_phage	4.3e-65	49.6
WP_005745608.1\|1222522_1223911_+	replicative DNA helicase	A0A2H4J8N1	uncultured_Caudovirales_phage	1.3e-144	58.6
WP_005745611.1\|1224385_1224670_+	hypothetical protein	NA	NA	NA	NA
WP_005745612.1\|1224666_1225041_+	hypothetical protein	A0A1W6JTD2	Pseudomonas_phage	8.4e-35	56.7
WP_052764748.1\|1225514_1226435_+	hypothetical protein	NA	NA	NA	NA
WP_044299601.1\|1226480_1226795_+\|holin	phage holin, lambda family	NA	NA	NA	NA
WP_005745616.1\|1226791_1227211_+	hypothetical protein	NA	NA	NA	NA
WP_005745617.1\|1227182_1227329_+	hypothetical protein	NA	NA	NA	NA
WP_005745620.1\|1227850_1228189_+	HNH endonuclease	C4ML58	Xanthomonas_virus	6.6e-23	50.0
WP_005745623.1\|1228327_1228834_+\|terminase	terminase	Q3HQS6	Burkholderia_phage	3.5e-20	46.3
WP_080164433.1\|1228833_1230519_+\|terminase	terminase large subunit	A0A2H4JDK9	uncultured_Caudovirales_phage	5.3e-254	83.4
WP_044299589.1\|1230521_1231736_+\|portal	phage portal protein	A0A2H4JFN7	uncultured_Caudovirales_phage	7.4e-173	74.0
WP_005745628.1\|1231722_1232364_+\|head,protease	HK97 family phage prohead protease	A0A2H4JA51	uncultured_Caudovirales_phage	6.2e-86	76.1
WP_003313682.1\|1232360_1233566_+\|capsid	phage major capsid protein	A0A2H4J8D1	uncultured_Caudovirales_phage	2.2e-132	61.7
WP_005745629.1\|1233625_1233964_+	hypothetical protein	A0A2H4JG33	uncultured_Caudovirales_phage	4.6e-08	50.8
WP_005745630.1\|1233963_1234263_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4J8C5	uncultured_Caudovirales_phage	2.1e-36	75.8
WP_005745632.1\|1234262_1234583_+\|head,tail	head-tail adaptor protein	A0A2D1GNG1	Pseudomonas_phage	2.6e-29	64.6
WP_005745634.1\|1234592_1234757_+	hypothetical protein	A0A2D1GNQ5	Pseudomonas_phage	7.9e-06	55.4
WP_005745635.1\|1234760_1235261_+	HK97 gp10 family phage protein	A0A2D1GNN2	Pseudomonas_phage	5.3e-61	70.9
WP_003313676.1\|1235253_1235640_+	DUF3168 domain-containing protein	A0A2D1GNT4	Pseudomonas_phage	2.0e-55	84.4
WP_005745636.1\|1235694_1236192_+	hypothetical protein	A0A2D1GNF2	Pseudomonas_phage	1.5e-71	79.4
WP_005745637.1\|1236203_1236539_+	hypothetical protein	A0A2D1GNT5	Pseudomonas_phage	1.2e-27	59.4
WP_004408598.1\|1236571_1236781_+	hypothetical protein	A0A2D1GNK2	Pseudomonas_phage	9.8e-09	63.3
WP_005745639.1\|1240299_1240638_+\|tail	phage tail protein	I6PBN7	Cronobacter_phage	1.8e-15	39.7
WP_046835133.1\|1240634_1241384_+\|tail	phage minor tail protein L	A0A2H4J4Q5	uncultured_Caudovirales_phage	2.2e-119	79.1
WP_046835132.1\|1241386_1242151_+	C40 family peptidase	A0A2H4J1J7	uncultured_Caudovirales_phage	3.5e-128	81.2
WP_005745643.1\|1242212_1242560_+	hypothetical protein	A0A1B0VMC6	Pseudomonas_phage	2.9e-29	66.7
WP_005745644.1\|1242614_1243202_+\|tail	tail assembly protein	A0A2H4J1H0	uncultured_Caudovirales_phage	1.1e-70	70.5
WP_046835131.1\|1243259_1246961_+\|tail	phage tail protein	A0A2H4J8Z6	uncultured_Caudovirales_phage	0.0e+00	62.7
WP_005746967.1\|1246957_1247326_+	hypothetical protein	A0A059VJS9	Pseudomonas_phage	1.8e-61	96.7
WP_005746966.1\|1247322_1247985_+	hypothetical protein	A0A059VF40	Pseudomonas_phage	3.3e-119	94.1
WP_080164434.1\|1248014_1249553_+\|tail	tail fiber domain-containing protein	A0A059VJZ6	Pseudomonas_phage	5.3e-43	61.0
WP_080164435.1\|1249613_1250159_+	glycoside hydrolase family 19 protein	A0A2H4JHX4	uncultured_Caudovirales_phage	6.4e-76	77.3
WP_052764755.1\|1250191_1250569_+	hypothetical protein	A0A291AUV3	Sinorhizobium_phage	4.3e-23	47.1
WP_046835246.1\|1250568_1251099_+	DUF2514 domain-containing protein	A0A059VF51	Pseudomonas_phage	5.7e-61	84.4
WP_046719569.1\|1251155_1251335_+	hypothetical protein	A0A059VK06	Pseudomonas_phage	2.6e-10	57.1
WP_046835241.1\|1251331_1252576_+	SGNH/GDSL hydrolase family protein	A0A059VA35	Pseudomonas_phage	7.2e-208	87.2
WP_052764754.1\|1252661_1253504_-	restriction endonuclease	A0A2H4J8H9	uncultured_Caudovirales_phage	2.0e-36	32.6
WP_046835244.1\|1253534_1254791_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAT5	uncultured_Caudovirales_phage	6.2e-191	78.7
WP_046835240.1\|1255204_1256086_-	alpha/beta hydrolase	NA	NA	NA	NA
1254984:1255007	attR	NA	NA	NA	NA
WP_005779192.1\|1256383_1257076_-	16S rRNA pseudouridine(516) synthase	NA	NA	NA	NA
WP_005779194.1\|1257111_1257336_-	cysteine-rich CWC family protein	NA	NA	NA	NA
WP_010200872.1\|1257392_1260698_-	hypothetical protein	NA	NA	NA	NA
WP_005746616.1\|1260840_1262655_-	allophanate hydrolase	NA	NA	NA	NA
WP_046835239.1\|1262690_1266383_-	urea carboxylase	NA	NA	NA	NA
WP_005735135.1\|1266492_1267110_-	urea carboxylase-associated family protein	NA	NA	NA	NA
WP_005746614.1\|1267121_1267847_-	urea carboxylase-associated family protein	NA	NA	NA	NA
WP_005746613.1\|1267843_1268626_-	ABC transporter ATP-binding protein	A0A140XAK6	Dickeya_phage	3.0e-18	50.5
WP_005746611.1\|1268622_1269438_-	ABC transporter permease	G3M9Y4	Bacillus_virus	4.3e-07	24.1
WP_005746610.1\|1269465_1270533_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005746609.1\|1271095_1271587_+	hypothetical protein	NA	NA	NA	NA
WP_002554923.1\|1271779_1272472_+	uracil-DNA glycosylase	S4VYQ4	Pandoravirus	6.1e-55	46.5
WP_005746608.1\|1272493_1273528_-	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_002554921.1\|1273520_1275035_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
WP_005746607.1\|1275036_1275495_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
WP_005746605.1\|1275557_1276538_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_002554918.1\|1277018_1277690_+	response regulator	NA	NA	NA	NA
WP_005746604.1\|1277682_1279065_+	sensor histidine kinase	W8CYF6	Bacillus_phage	5.0e-16	25.9
WP_005746602.1\|1279067_1279889_-	HDOD domain-containing protein	A0A1C3NFB0	Phage_NCTB	3.9e-24	31.4
WP_038820211.1\|1280003_1280945_-	folate-binding protein YgfZ	NA	NA	NA	NA
WP_003378499.1\|1281098_1281353_+	succinate dehydrogenase assembly factor 2	NA	NA	NA	NA
WP_005746600.1\|1281336_1281801_+	hypothetical protein	NA	NA	NA	NA
WP_005746599.1\|1281769_1283386_-	L-aspartate oxidase	NA	NA	NA	NA
WP_002554912.1\|1283883_1284465_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_004658251.1\|1284498_1285089_+	sigma factor AlgU negative regulatory protein	NA	NA	NA	NA
WP_005746598.1\|1285097_1286057_+	sigma factor AlgU regulatory protein MucB	NA	NA	NA	NA
WP_002554910.1\|1286340_1287780_+\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	7.7e-28	31.2

DBSCAN-SWA_5

1541782 : 1547775

uncultured_Caudovirales_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005743339.1\|1541782_1542157_-	hypothetical protein	H2BD46	Pseudomonas_phage	1.4e-21	51.4
WP_046835064.1\|1542500_1542743_+	hypothetical protein	A0A2H4JEE3	uncultured_Caudovirales_phage	1.4e-22	62.0
WP_005743342.1\|1542820_1543306_+	hypothetical protein	NA	NA	NA	NA
WP_005743346.1\|1543669_1544179_+	hypothetical protein	Q6V7L5	Burkholderia_virus	1.2e-52	59.8
WP_080164457.1\|1544532_1544808_-	DUF4102 domain-containing protein	A0A2H4JAT5	uncultured_Caudovirales_phage	1.1e-28	65.6
WP_004418793.1\|1545191_1546256_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_004656249.1\|1546270_1547386_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.7e-95	49.3
WP_002552468.1\|1547439_1547775_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	2.2e-10	44.6

DBSCAN-SWA_6

1679919 : 1797246

117

Pseudomonas_phage(45.1%)

tail,transposase,protease,lysis,terminase,head,integrase,capsid,tRNA,portal

attL 1699272:1699286|attR 1797634:1797648

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005743435.1\|1679919_1681272_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_046835059.1\|1681346_1683722_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_002554721.1\|1683767_1684271_+	OmpH family outer membrane protein	NA	NA	NA	NA
WP_005743437.1\|1684273_1685329_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_002554719.1\|1685438_1685879_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_002554718.1\|1685875_1686652_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_010201456.1\|1686654_1687797_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_002554716.1\|1687808_1688462_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	3.0e-27	40.5
WP_005743439.1\|1688531_1692053_+	DNA polymerase III subunit alpha	A0A1C9LWZ5	Streptomyces_phage	1.4e-195	37.4
WP_002554714.1\|1692181_1693129_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_005743440.1\|1693281_1694619_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_002554712.1\|1694882_1696514_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	8.2e-159	53.3
WP_004666021.1\|1696528_1697374_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.2e-49	42.0
WP_005743441.1\|1697513_1698800_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	1.6e-138	60.0
WP_002554710.1\|1698990_1699269_+	cell division protein FtsB	NA	NA	NA	NA
1699272:1699286	attL	NA	NA	NA	NA
WP_004657939.1\|1699282_1699993_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_005743443.1\|1699993_1700890_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004666019.1\|1700994_1702107_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	4.0e-32	28.5
WP_005733317.1\|1702182_1703028_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_002554705.1\|1703080_1703554_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_005743444.1\|1703550_1704609_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_005743445.1\|1704596_1705346_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.6e-64	49.8
WP_004418684.1\|1705345_1706023_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	8.0e-44	53.7
WP_005743446.1\|1706231_1707098_+	peptidoglycan DD-metalloendopeptidase family protein	I3PV79	Clostridium_phage	5.5e-13	35.3
WP_004657931.1\|1707201_1708209_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	8.6e-34	35.8
WP_004657930.1\|1708725_1709049_-	ferredoxin family protein	NA	NA	NA	NA
WP_161798105.1\|1709308_1711876_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	8.1e-28	24.0
WP_005743449.1\|1712346_1712862_+	CinA family protein	B5TK85	Pseudomonas_phage	9.1e-56	70.5
WP_004657925.1\|1712955_1714020_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.4e-111	62.4
WP_005743450.1\|1714025_1714493_+	recombination regulator RecX	NA	NA	NA	NA
WP_002554686.1\|1714497_1715619_-	LOG family protein	NA	NA	NA	NA
WP_002554685.1\|1715812_1716229_-	quorum-sensing-regulated virulence factor family protein	NA	NA	NA	NA
WP_002554684.1\|1716508_1717219_+	DTW domain-containing protein	NA	NA	NA	NA
WP_005743454.1\|1717464_1718112_+	response regulator transcription factor	NA	NA	NA	NA
WP_002554682.1\|1718195_1718561_+	diacylglycerol kinase	NA	NA	NA	NA
WP_002554681.1\|1718568_1719495_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002554680.1\|1719618_1720398_+	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_005743456.1\|1720477_1721170_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_002554678.1\|1721183_1721645_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	4.2e-36	49.3
WP_002554677.1\|1721725_1722436_-	RNA-binding protein S4	NA	NA	NA	NA
WP_002554676.1\|1722528_1722969_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_005743457.1\|1723071_1724403_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_005743458.1\|1724437_1726057_+	recombinase family protein	Q3HQV4	Burkholderia_phage	1.2e-162	57.4
WP_005743459.1\|1726120_1726378_+	DUF1654 domain-containing protein	NA	NA	NA	NA
WP_005743460.1\|1726495_1727071_+	hypothetical protein	NA	NA	NA	NA
WP_005743461.1\|1727081_1728158_+	hypothetical protein	NA	NA	NA	NA
WP_005743462.1\|1728168_1728387_+	hypothetical protein	NA	NA	NA	NA
WP_080164464.1\|1728386_1728659_+	hypothetical protein	A8YQQ5	Burkholderia_virus	1.5e-09	46.2
WP_005743464.1\|1728682_1729042_+	hypothetical protein	NA	NA	NA	NA
WP_044299196.1\|1729108_1729828_-	helix-turn-helix domain-containing protein	A0A1W6JTC8	Pseudomonas_phage	5.0e-44	56.4
WP_005743466.1\|1729975_1730200_+	Cro/Cl family transcriptional regulator	A0A2H4J1L8	uncultured_Caudovirales_phage	3.1e-08	45.2
WP_024643230.1\|1730196_1730820_+	hypothetical protein	NA	NA	NA	NA
WP_005743468.1\|1731011_1731716_+	hypothetical protein	NA	NA	NA	NA
WP_005743470.1\|1732370_1732640_-	transcriptional regulator	U3PB63	Vibrio_phage	1.9e-09	41.8
WP_044299205.1\|1732717_1733572_-\|portal	phage portal protein	A0A0U4B0L9	Pseudomonas_phage	3.1e-101	76.9
WP_005743472.1\|1733498_1735553_-\|terminase	terminase	A0A0U4JIZ9	Pseudomonas_phage	1.9e-266	71.9
WP_005743475.1\|1735714_1736638_+	hypothetical protein	A0A0U4JVV6	Pseudomonas_phage	3.4e-61	55.9
WP_005743476.1\|1736639_1737662_+\|capsid	phage major capsid protein, P2 family	A0A0U4K5I9	Pseudomonas_phage	4.5e-123	66.5
WP_005743477.1\|1737658_1738381_+\|terminase	terminase	A0A0U4JEJ1	Pseudomonas_phage	5.5e-83	70.7
WP_004415361.1\|1738484_1738946_+\|head	head completion/stabilization protein	A0A0U4J933	Pseudomonas_phage	5.5e-44	60.8
WP_005743479.1\|1738942_1739386_+\|tail	tail protein	A0A0U4IBS7	Pseudomonas_phage	1.6e-48	63.7
WP_005743480.1\|1739375_1740044_+	virion morphogenesis protein	A0A0U4ISN1	Pseudomonas_phage	1.7e-54	55.2
WP_005743481.1\|1740058_1741171_+	DUF2586 family protein	A0A0U4KLE6	Pseudomonas_phage	1.0e-136	66.6
WP_003342306.1\|1741174_1741627_+	DUF2597 family protein	A0A0U3TH58	Pseudomonas_phage	7.2e-57	72.8
WP_005743482.1\|1741626_1741836_+	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
WP_004415377.1\|1741835_1742042_+	hypothetical protein	NA	NA	NA	NA
WP_005743485.1\|1742038_1742566_+	lysozyme	NA	NA	NA	NA
WP_005743486.1\|1742562_1743042_+\|lysis	lysis protein	A0A0U4JXC2	Pseudomonas_phage	1.5e-20	45.6
WP_005743487.1\|1743075_1743366_+	hypothetical protein	A0A0U4B0P2	Pseudomonas_phage	4.1e-21	63.6
WP_005743488.1\|1743386_1743530_+	hypothetical protein	A0A0U4B0S4	Pseudomonas_phage	5.3e-14	71.7
WP_005743489.1\|1743535_1745701_+\|tail	phage tail tape measure protein	A0A0U4IJ81	Pseudomonas_phage	1.2e-125	39.3
WP_005743490.1\|1745700_1746018_+	DUF2590 family protein	A0A0U4B0N5	Pseudomonas_phage	4.4e-37	78.4
WP_005743491.1\|1746014_1747184_+	hypothetical protein	A0A0U4JJ14	Pseudomonas_phage	6.7e-155	69.4
WP_005743492.1\|1747180_1747705_+\|tail	phage tail protein	A0A0U4JVX3	Pseudomonas_phage	3.2e-72	73.0
WP_005743493.1\|1747713_1749711_+\|tail	phage tail protein	A0A0U4K5K2	Pseudomonas_phage	1.0e-107	56.4
WP_005743494.1\|1749707_1750178_+	hypothetical protein	NA	NA	NA	NA
WP_005743495.1\|1750167_1751100_+	hypothetical protein	NA	NA	NA	NA
WP_005743497.1\|1751096_1751627_+	hypothetical protein	A0A0U4J942	Pseudomonas_phage	3.2e-48	57.3
WP_046835055.1\|1751623_1752334_+	hypothetical protein	A0A2I7RNK1	Vibrio_phage	2.6e-37	38.3
WP_125856949.1\|1752306_1753278_+	hypothetical protein	A0A0U4IBV2	Pseudomonas_phage	2.0e-120	64.6
WP_044299197.1\|1753292_1754117_-	2OG-Fe(II) oxygenase	NA	NA	NA	NA
WP_007247761.1\|1754972_1755950_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114805103.1\|1756290_1757406_-	DUF4113 domain-containing protein	I6RSM4	Salmonella_phage	9.7e-79	45.8
WP_005746524.1\|1757490_1758579_+	type III secretion system YopJ family effector HopZ2	NA	NA	NA	NA
WP_044299817.1\|1758744_1760886_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_080164465.1\|1760909_1761920_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_005746527.1\|1761980_1762229_-	RulB protein	A0A218MNF2	uncultured_virus	2.6e-24	68.4
WP_005746528.1\|1762212_1762647_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.3e-15	36.9
WP_005746529.1\|1763240_1764035_+	DNA adenine methylase	Q5ZQW7	Pseudomonas_phage	6.7e-98	66.3
WP_005746530.1\|1764085_1764481_-	hypothetical protein	NA	NA	NA	NA
WP_005733333.1\|1766691_1768587_+	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	5.2e-72	33.3
WP_002554672.1\|1768684_1770019_-	virulence factor family protein	NA	NA	NA	NA
WP_005746534.1\|1770018_1772661_-	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
WP_005746536.1\|1773653_1774715_+	DNA polymerase IV	NA	NA	NA	NA
WP_005746537.1\|1774754_1775711_-	hypothetical protein	NA	NA	NA	NA
WP_002554668.1\|1775781_1777497_-\|tRNA	proline--tRNA ligase	A0A2K9L0T2	Tupanvirus	9.9e-06	23.9
WP_005746539.1\|1777668_1779015_-	OprD family porin	NA	NA	NA	NA
WP_004657909.1\|1779878_1780310_+	HIT domain-containing protein	NA	NA	NA	NA
WP_002554665.1\|1780306_1780513_+	protein SlyX	NA	NA	NA	NA
WP_002554664.1\|1780578_1781187_-	cold-shock protein	A0A1X9IGI9	Lactococcus_phage	1.1e-10	47.6
WP_003314356.1\|1781645_1782119_+	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	3.9e-21	40.0
WP_005746541.1\|1782468_1782813_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA
WP_002554661.1\|1783093_1784869_+\|tRNA	aspartate--tRNA ligase	A0A1V0SIS0	Klosneuvirus	3.3e-12	27.0
WP_004657903.1\|1784985_1785732_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_005746542.1\|1785862_1786387_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
WP_004657901.1\|1786474_1787083_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_002554657.1\|1787083_1788145_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	8.8e-05	26.0
WP_005733346.1\|1788278_1788746_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
WP_002554655.1\|1788735_1789431_+	protein TolQ	NA	NA	NA	NA
WP_161420636.1\|1789454_1789910_+	protein TolR	NA	NA	NA	NA
WP_005746544.1\|1789909_1790980_+	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_002554652.1\|1790976_1792278_+	Tol-Pal system protein TolB	NA	NA	NA	NA
WP_002554651.1\|1792330_1792831_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
WP_054991767.1\|1792837_1793656_+	tol-pal system protein YbgF	NA	NA	NA	NA
WP_002554649.1\|1793827_1794475_+	7-carboxy-7-deazaguanine synthase QueE	NA	NA	NA	NA
WP_002554648.1\|1794476_1795166_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	9.7e-29	38.5
WP_005746546.1\|1795791_1797246_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
1797634:1797648	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1811829 : 1855339

Shewanella_sp._phage(50.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004663854.1\|1811829_1812933_+\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_007247761.1\|1813480_1814458_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_052308352.1\|1814829_1815726_+	hypothetical protein	NA	NA	NA	NA
WP_005746561.1\|1816088_1816745_+\|protease	YopT-type cysteine protease domain-containing protein	NA	NA	NA	NA
WP_005746564.1\|1818078_1818624_-	hypothetical protein	NA	NA	NA	NA
WP_046835370.1\|1818934_1819633_-	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_004662717.1\|1819629_1819929_-	hypothetical protein	NA	NA	NA	NA
WP_162305741.1\|1819925_1822883_-	conjugative transfer ATPase	NA	NA	NA	NA
WP_046835369.1\|1822882_1823338_-	TIGR03751 family conjugal transfer lipoprotein	NA	NA	NA	NA
WP_080164472.1\|1823315_1824812_-	TIGR03752 family integrating conjugative element protein	NA	NA	NA	NA
WP_046835367.1\|1824801_1825725_-	TIGR03749 family integrating conjugative element protein	NA	NA	NA	NA
WP_005740040.1\|1825721_1826390_-	TIGR03746 family integrating conjugative element protein	NA	NA	NA	NA
WP_046835366.1\|1826386_1826779_-	TIGR03750 family conjugal transfer protein	NA	NA	NA	NA
WP_005741243.1\|1826794_1827163_-	TIGR03745 family integrating conjugative element membrane protein	NA	NA	NA	NA
WP_005740038.1\|1827182_1827422_-	TIGR03758 family integrating conjugative element protein	NA	NA	NA	NA
WP_074801173.1\|1827418_1827784_-	conjugal transfer protein	NA	NA	NA	NA
WP_005741127.1\|1827863_1828196_-	DUF4177 domain-containing protein	NA	NA	NA	NA
WP_004663525.1\|1828365_1828797_+	hypothetical protein	NA	NA	NA	NA
WP_046835365.1\|1828819_1830277_-	ATP-dependent helicase	A0A088C4M0	Shewanella_sp._phage	2.3e-43	30.7
WP_044422924.1\|1830286_1831036_-	TIGR03747 family integrating conjugative element membrane protein	NA	NA	NA	NA
WP_080164473.1\|1831075_1833235_-	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA
WP_054068164.1\|1833246_1833753_-	integrating conjugative element protein	NA	NA	NA	NA
WP_024670959.1\|1833749_1834307_-	hypothetical protein	NA	NA	NA	NA
WP_054068165.1\|1834291_1835038_-	TIGR03759 family integrating conjugative element protein	NA	NA	NA	NA
WP_080164474.1\|1835046_1835751_-	hypothetical protein	NA	NA	NA	NA
WP_080164475.1\|1836549_1837527_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_080164476.1\|1838719_1840978_-	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_080164477.1\|1841085_1842537_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_046835568.1\|1842566_1843166_-	hypothetical protein	NA	NA	NA	NA
WP_046835567.1\|1843291_1843903_-	DUF3275 family protein	NA	NA	NA	NA
WP_046835566.1\|1844003_1844339_-	hypothetical protein	NA	NA	NA	NA
WP_080164480.1\|1844693_1845248_-	DUF3577 domain-containing protein	NA	NA	NA	NA
WP_005740009.1\|1845344_1845563_-	hypothetical protein	NA	NA	NA	NA
WP_053486686.1\|1845867_1846236_-	hypothetical protein	NA	NA	NA	NA
WP_080164481.1\|1846443_1846977_-	regulator	NA	NA	NA	NA
WP_080164482.1\|1848049_1850071_-	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	4.0e-38	29.7
WP_004663854.1\|1850656_1851760_-\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_004663854.1\|1851838_1852942_-\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_007247761.1\|1853148_1854126_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_007247761.1\|1854361_1855339_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

1889206 : 1944742

Pseudomonas_phage(63.46%)

tail,transposase,protease,integrase,capsid,terminase

attL 1889034:1889093|attR 1940404:1940469

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1889034:1889093	attL	NA	NA	NA	NA
WP_046835515.1\|1889206_1890184_+\|integrase	site-specific integrase	W6MYA3	Pseudomonas_phage	7.1e-126	70.5
WP_046835508.1\|1890518_1890704_+	hypothetical protein	NA	NA	NA	NA
WP_046835509.1\|1890756_1891653_+\|protease	serine protease	NA	NA	NA	NA
WP_080164496.1\|1891984_1892719_-	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.7e-119	77.5
WP_086004131.1\|1892766_1893501_-	site-specific DNA-methyltransferase	Q6UJ22	Burkholderia_virus	7.1e-70	56.2
WP_080164497.1\|1893619_1894132_-	hypothetical protein	NA	NA	NA	NA
WP_080164498.1\|1894340_1895114_-	site-specific DNA-methyltransferase	A0A0H5BBV5	Pseudomonas_phage	1.0e-98	71.4
WP_080164499.1\|1895187_1895439_-	hypothetical protein	A0A2D2W503	Ralstonia_phage	2.5e-11	45.6
WP_044298666.1\|1895923_1896283_-	hypothetical protein	NA	NA	NA	NA
WP_046835305.1\|1896279_1897911_-	heme peroxidase	A0A2H4J6P1	uncultured_Caudovirales_phage	2.5e-184	63.5
WP_044298667.1\|1897907_1898663_-	hypothetical protein	A0A2H4IZU8	uncultured_Caudovirales_phage	1.3e-122	88.8
WP_005741138.1\|1899019_1899190_-	hypothetical protein	NA	NA	NA	NA
WP_052764758.1\|1899186_1899777_-	hypothetical protein	A0A127KN62	Pseudomonas_phage	8.9e-15	30.4
WP_052764757.1\|1899773_1899968_-	hypothetical protein	NA	NA	NA	NA
WP_054068333.1\|1899964_1900366_-	hypothetical protein	A0A2H4J9E7	uncultured_Caudovirales_phage	8.2e-12	37.8
WP_046835483.1\|1900386_1900620_-	hypothetical protein	A0A2H4JA69	uncultured_Caudovirales_phage	1.1e-11	48.6
WP_080164501.1\|1901081_1901321_-	hypothetical protein	NA	NA	NA	NA
WP_005747086.1\|1901317_1901542_-	hypothetical protein	NA	NA	NA	NA
WP_005747087.1\|1901587_1902061_-	Pathogenesis-related transcriptional factor and ERF protein	A0A173GC65	Salmonella_phage	3.7e-27	41.1
WP_080164502.1\|1902513_1903431_-	hypothetical protein	NA	NA	NA	NA
WP_080164876.1\|1903489_1904305_-	LexA family transcriptional regulator	A0A2H4J6Q0	uncultured_Caudovirales_phage	3.7e-51	41.7
WP_005747099.1\|1904645_1904846_+	hypothetical protein	A0A2H4J115	uncultured_Caudovirales_phage	3.1e-12	57.8
WP_005747101.1\|1904866_1905070_+	hypothetical protein	NA	NA	NA	NA
WP_005747102.1\|1905151_1905382_-	hypothetical protein	NA	NA	NA	NA
WP_080164503.1\|1905520_1906327_+	Rha family transcriptional regulator	A0A2H4J111	uncultured_Caudovirales_phage	1.3e-69	56.6
WP_080164504.1\|1906326_1907121_+	Pyocin large subunit-like protein	A0A059VF77	Pseudomonas_phage	2.5e-137	90.5
WP_080164505.1\|1907110_1907929_+	ATP-binding protein	A0A059VK34	Pseudomonas_phage	4.7e-147	98.5
WP_125856951.1\|1907925_1908279_+	hypothetical protein	NA	NA	NA	NA
WP_080164507.1\|1908275_1908464_+	DUF1382 family protein	A0A2H4J9M2	uncultured_Caudovirales_phage	9.7e-16	70.5
WP_164513099.1\|1908460_1908634_+	hypothetical protein	NA	NA	NA	NA
WP_080164508.1\|1909635_1910034_+	NinB family protein	A0A059VG13	Pseudomonas_phage	1.7e-70	97.0
WP_080164509.1\|1910033_1910294_+	hypothetical protein	A0A0S2SYB2	Pseudomonas_phage	3.3e-06	41.0
WP_080164510.1\|1910290_1910875_+	recombination protein NinG	A0A059VA66	Pseudomonas_phage	1.2e-80	72.7
WP_080164511.1\|1910871_1911417_+	hypothetical protein	A0A0H5AWB8	Pseudomonas_phage	1.1e-62	66.3
WP_046835471.1\|1911478_1911979_+	HNH endonuclease	A0A1W6DY33	Salmonella_phage	4.6e-28	44.7
WP_080164512.1\|1912226_1912598_+	chemotaxis protein	A0A059VK40	Pseudomonas_phage	5.7e-44	77.2
WP_080164513.1\|1912597_1912936_+	hypothetical protein	A0A059VJW1	Pseudomonas_phage	9.0e-28	74.7
WP_080164515.1\|1913493_1914117_+	hypothetical protein	A0A059VJU8	Pseudomonas_phage	1.3e-112	95.2
WP_054068786.1\|1914149_1914611_+	DUF2280 domain-containing protein	A0A1B0VMH2	Pseudomonas_phage	3.9e-50	78.5
WP_005746993.1\|1914597_1915899_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	1.5e-147	58.3
WP_044299909.1\|1915907_1917347_+	DUF4055 domain-containing protein	A0A2H4J5M6	uncultured_Caudovirales_phage	4.2e-74	37.4
WP_005746990.1\|1917336_1918386_+\|capsid	minor capsid protein	D2XJ68	Escherichia_phage	2.0e-41	32.0
WP_005746989.1\|1918501_1919212_+	hypothetical protein	A0A2H4J0Y0	uncultured_Caudovirales_phage	2.1e-34	56.3
WP_005746988.1\|1919224_1920193_+	hypothetical protein	R9TJ64	Synechococcus_phage	1.2e-114	66.4
WP_005746987.1\|1920244_1920820_+	hypothetical protein	A0A1B0VMF7	Pseudomonas_phage	2.6e-11	38.5
WP_005746986.1\|1920871_1921261_+	hypothetical protein	A0A0S2SYB7	Pseudomonas_phage	1.0e-14	43.4
WP_005746985.1\|1921264_1921624_+	hypothetical protein	A0A0S2SYG4	Pseudomonas_phage	2.1e-19	45.8
WP_005746984.1\|1921623_1922004_+	hypothetical protein	A0A059VF88	Pseudomonas_phage	3.6e-33	56.2
WP_005746983.1\|1922000_1922423_+	hypothetical protein	A0A059VK45	Pseudomonas_phage	1.7e-63	86.4
WP_052764765.1\|1922431_1923289_+	hypothetical protein	NA	NA	NA	NA
WP_080164516.1\|1923355_1924516_+	Ig domain-containing protein	A0A059VG08	Pseudomonas_phage	1.1e-165	97.4
WP_046835467.1\|1924595_1925069_+	hypothetical protein	A0A059VF34	Pseudomonas_phage	2.2e-48	60.5
WP_005746976.1\|1925086_1925338_+	hypothetical protein	A0A059VJS3	Pseudomonas_phage	2.2e-31	78.3
WP_080164518.1\|1925810_1926173_+	DUF2513 domain-containing protein	A0A2H4J4K9	uncultured_Caudovirales_phage	5.1e-05	28.1
WP_080164519.1\|1926236_1926596_+	hypothetical protein	NA	NA	NA	NA
WP_080164520.1\|1926651_1930326_+\|tail	phage tail tape measure protein	A0A059VJZ1	Pseudomonas_phage	1.0e-246	51.5
WP_080164521.1\|1930343_1930928_+	hypothetical protein	A0A059VJR9	Pseudomonas_phage	2.1e-101	95.4
WP_003343278.1\|1930927_1931530_+	hypothetical protein	A0A059VA31	Pseudomonas_phage	2.8e-112	99.5
WP_005746970.1\|1931532_1931931_+	hypothetical protein	A0A059VK01	Pseudomonas_phage	2.7e-71	93.9
WP_046835462.1\|1931930_1935110_+	DUF1983 domain-containing protein	A0A059VFW9	Pseudomonas_phage	0.0e+00	77.7
WP_046835461.1\|1935106_1935475_+	hypothetical protein	A0A059VJS9	Pseudomonas_phage	3.7e-59	93.4
WP_005746966.1\|1935471_1936134_+	hypothetical protein	A0A059VF40	Pseudomonas_phage	3.3e-119	94.1
WP_080164522.1\|1936163_1937702_+\|tail	tail fiber domain-containing protein	A0A059VJZ6	Pseudomonas_phage	5.3e-43	61.0
WP_080164523.1\|1937761_1938295_+	glycoside hydrolase family 19 protein	A0A059VA40	Pseudomonas_phage	1.3e-89	92.7
WP_005746962.1\|1938291_1938807_+	DUF2514 domain-containing protein	A0A059VF51	Pseudomonas_phage	5.2e-59	80.1
WP_005746961.1\|1938819_1939032_+	hypothetical protein	A0A059VK06	Pseudomonas_phage	1.3e-11	55.7
WP_080164877.1\|1940035_1940272_+	hypothetical protein	A0A059VA35	Pseudomonas_phage	3.5e-31	85.9
WP_125856952.1\|1940777_1941167_+	hypothetical protein	NA	NA	NA	NA
1940404:1940469	attR	NA	NA	NA	NA
WP_080164525.1\|1942231_1942417_+	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|1942551_1943529_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_007247761.1\|1943764_1944742_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1966838 : 2018199

uncultured_virus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_054068140.1\|1966838_1968365_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	5.0e-126	50.7
WP_080164547.1\|1968561_1969260_+	hypothetical protein	NA	NA	NA	NA
WP_080164548.1\|1969381_1970188_-	hypothetical protein	NA	NA	NA	NA
WP_080164549.1\|1970294_1970888_-	hypothetical protein	NA	NA	NA	NA
WP_080164550.1\|1970959_1971664_-	hypothetical protein	NA	NA	NA	NA
WP_080164551.1\|1971825_1972548_-	hypothetical protein	NA	NA	NA	NA
WP_125856959.1\|1972683_1973991_+	hypothetical protein	NA	NA	NA	NA
WP_080164553.1\|1973987_1974656_+	hypothetical protein	NA	NA	NA	NA
WP_125856960.1\|1974666_1975134_-	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|1975163_1976141_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_080164555.1\|1976275_1976563_-	hypothetical protein	NA	NA	NA	NA
WP_080164556.1\|1976564_1976996_-	hypothetical protein	NA	NA	NA	NA
WP_080164557.1\|1977022_1977820_-	hypothetical protein	NA	NA	NA	NA
WP_125856961.1\|1977894_1979046_+	hypothetical protein	NA	NA	NA	NA
WP_080164559.1\|1979086_1979869_-	hypothetical protein	NA	NA	NA	NA
WP_080164560.1\|1979953_1980262_+	hypothetical protein	NA	NA	NA	NA
WP_080164561.1\|1980258_1980504_+	hypothetical protein	NA	NA	NA	NA
WP_080164562.1\|1980597_1980984_+	hypothetical protein	NA	NA	NA	NA
WP_080164563.1\|1981167_1981911_+	hypothetical protein	NA	NA	NA	NA
WP_080164564.1\|1981986_1982301_+	hypothetical protein	NA	NA	NA	NA
WP_080164565.1\|1982388_1983381_+	SMEK domain-containing protein	NA	NA	NA	NA
WP_080164566.1\|1983396_1984023_+	hypothetical protein	NA	NA	NA	NA
WP_080164567.1\|1984036_1985050_+	SMEK domain-containing protein	NA	NA	NA	NA
WP_080164568.1\|1985088_1987392_-	hypothetical protein	NA	NA	NA	NA
WP_080164569.1\|1987409_1988243_-	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|1988575_1989553_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_080164571.1\|1989679_1989961_-	hypothetical protein	NA	NA	NA	NA
WP_125856963.1\|1990439_1991003_+	hypothetical protein	NA	NA	NA	NA
WP_080164573.1\|1991254_1992406_+	hypothetical protein	NA	NA	NA	NA
WP_080164574.1\|1992710_1993781_-	DUF4935 domain-containing protein	NA	NA	NA	NA
WP_080164575.1\|1993833_1995453_-	DUF4145 domain-containing protein	NA	NA	NA	NA
WP_080164576.1\|1995481_1996306_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_080164577.1\|1996299_1996773_-	hypothetical protein	NA	NA	NA	NA
WP_080164578.1\|1996844_1997189_+	hypothetical protein	NA	NA	NA	NA
WP_164513104.1\|1997288_1997765_+	hypothetical protein	NA	NA	NA	NA
WP_080164580.1\|1997796_1998540_-	abortive infection family protein	NA	NA	NA	NA
WP_080164581.1\|1998694_2000206_+	site-specific DNA-methyltransferase	A0A220NUF4	Escherichia_phage	3.7e-57	35.7
WP_080164582.1\|2000208_2002851_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_164513090.1\|2002952_2003111_+	hypothetical protein	NA	NA	NA	NA
WP_125856965.1\|2003107_2003392_+	hypothetical protein	NA	NA	NA	NA
WP_080164584.1\|2003665_2003974_+	hypothetical protein	NA	NA	NA	NA
WP_125856966.1\|2004419_2007545_+	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_080164586.1\|2007630_2007909_+	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|2007976_2008954_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_164513105.1\|2009080_2009239_-	hypothetical protein	NA	NA	NA	NA
WP_125856967.1\|2009480_2009831_+	hypothetical protein	NA	NA	NA	NA
WP_080164589.1\|2009906_2010959_+	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|2011129_2012107_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_080164590.1\|2012241_2012637_-	hypothetical protein	NA	NA	NA	NA
WP_080164591.1\|2012633_2013182_-	hypothetical protein	NA	NA	NA	NA
WP_080164592.1\|2013251_2013578_-	hypothetical protein	NA	NA	NA	NA
WP_080164593.1\|2013742_2014054_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_164513106.1\|2014317_2014635_+	UV protection and mutation protein	A0A1L5C2A3	Pseudoalteromonas_phage	1.9e-08	34.8
WP_164513107.1\|2014643_2015543_+	abortive infection family protein	NA	NA	NA	NA
WP_080164596.1\|2015544_2016828_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	1.1e-86	43.2
WP_080164597.1\|2016876_2017182_+	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|2017221_2018199_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

2457541 : 2468010

uncultured_Caudovirales_phage(75.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002553992.1\|2457541_2458822_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	5.3e-97	45.8
WP_005745699.1\|2458822_2460217_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_005745697.1\|2460268_2461267_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_004659528.1\|2461375_2462377_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	2.0e-163	83.2
WP_005745695.1\|2462373_2462709_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	9.8e-43	76.6
WP_005745694.1\|2462705_2463005_-	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	2.9e-30	62.6
WP_005745693.1\|2463004_2463367_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	2.1e-35	62.8
WP_002553985.1\|2463368_2463761_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	8.2e-57	82.3
WP_005745692.1\|2463995_2465297_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.6e-61	36.1
WP_005745691.1\|2465311_2466091_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_005745689.1\|2466076_2466985_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002553978.1\|2467338_2468010_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	8.7e-107	92.8

DBSCAN-SWA_11

3026848 : 3075268

uncultured_Caudovirales_phage(33.33%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005744160.1\|3026848_3028180_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_039847652.1\|3028176_3028677_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_086004139.1\|3028998_3029988_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_005744164.1\|3029941_3032536_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	3.3e-93	32.4
WP_005744165.1\|3032532_3033552_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_044299267.1\|3033515_3035303_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_005744167.1\|3035395_3035803_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_005744168.1\|3035811_3037287_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_002553522.1\|3037315_3037816_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_007247761.1\|3037937_3038915_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_046835084.1\|3039718_3040294_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_005744172.1\|3040365_3041934_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	3.3e-40	42.9
WP_002553776.1\|3042586_3042868_+	hypothetical protein	NA	NA	NA	NA
WP_002553777.1\|3043018_3043360_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_002553778.1\|3043490_3043718_+	hypothetical protein	NA	NA	NA	NA
WP_005744173.1\|3043769_3044474_+	DUF1275 domain-containing protein	NA	NA	NA	NA
WP_005744174.1\|3044539_3045502_+	methyltransferase	NA	NA	NA	NA
WP_046835083.1\|3045790_3047413_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-23	29.8
WP_005744177.1\|3047427_3048267_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_005744178.1\|3048508_3049537_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.9e-30	38.8
WP_005744179.1\|3049533_3050406_+	ABC transporter permease	NA	NA	NA	NA
WP_005744180.1\|3050409_3051204_+	ABC transporter permease	NA	NA	NA	NA
WP_002553787.1\|3051221_3051512_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_005744181.1\|3051508_3052900_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_005744183.1\|3052896_3054081_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_005744185.1\|3054077_3055130_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005744186.1\|3055279_3056626_+	sodium:proton antiporter	NA	NA	NA	NA
WP_002553792.1\|3056904_3057903_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_002553793.1\|3057942_3058476_-	DUF3833 domain-containing protein	NA	NA	NA	NA
WP_002553794.1\|3058493_3059012_-	hypothetical protein	NA	NA	NA	NA
WP_044299272.1\|3059236_3059554_-	hypothetical protein	NA	NA	NA	NA
WP_161798107.1\|3060162_3062079_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.1e-21	56.5
WP_005744191.1\|3062496_3064215_-	ubiquinone-dependent pyruvate dehydrogenase	E4WLQ6	Ostreococcus_tauri_virus	1.2e-27	22.4
WP_002553803.1\|3064366_3066256_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_005744192.1\|3066394_3066823_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_005744194.1\|3066911_3067769_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_005744196.1\|3067866_3068172_+	RcnB family protein	NA	NA	NA	NA
WP_005733540.1\|3068410_3068899_+	DUF3828 domain-containing protein	NA	NA	NA	NA
WP_002553810.1\|3068962_3069166_+	hypothetical protein	NA	NA	NA	NA
WP_002553811.1\|3069325_3069523_+	hypothetical protein	NA	NA	NA	NA
WP_046835080.1\|3069531_3070983_-	MFS transporter	NA	NA	NA	NA
WP_161796148.1\|3071044_3072352_-	Mn(2+) uptake NRAMP transporter MntH	NA	NA	NA	NA
WP_080164667.1\|3072668_3074087_+	MFS transporter	NA	NA	NA	NA
WP_007247761.1\|3074290_3075268_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

3342211 : 3379646

Enterobacteria_phage(50.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005745213.1\|3342211_3343819_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_007247761.1\|3344074_3345052_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_005746878.1\|3345545_3346850_+	GAF domain-containing protein	NA	NA	NA	NA
WP_005746879.1\|3347187_3348327_+	pectate lyase	NA	NA	NA	NA
WP_005746880.1\|3348429_3349641_-	type II secretion system inner membrane protein GspF	NA	NA	NA	NA
WP_005746881.1\|3349640_3351059_-	type II secretion system ATPase GspE	NA	NA	NA	NA
WP_005746882.1\|3351055_3353392_-	type II secretion system secretin GspD	A7BJX1	Enterobacteria_phage	6.6e-37	35.7
WP_005746883.1\|3353391_3353940_-	type II secretion system protein M	NA	NA	NA	NA
WP_005746884.1\|3353944_3355117_-	general secretion pathway protein GspL	NA	NA	NA	NA
WP_005746885.1\|3355113_3356109_-	type II secretion system minor pseudopilin GspK	NA	NA	NA	NA
WP_004664843.1\|3356096_3356546_-	type II secretion system major pseudopilin GspG	NA	NA	NA	NA
WP_046835153.1\|3356714_3357107_+	type II secretion system minor pseudopilin GspI	NA	NA	NA	NA
WP_005746888.1\|3357112_3357547_-	general secretion pathway protein GspC	NA	NA	NA	NA
WP_005746889.1\|3357651_3358113_+	type II secretion system minor pseudopilin GspH	NA	NA	NA	NA
WP_005746890.1\|3358109_3358721_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_005746891.1\|3358797_3359442_-	glutathione S-transferase	NA	NA	NA	NA
WP_005746892.1\|3359484_3360381_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010198850.1\|3360539_3362105_+	MFS transporter	NA	NA	NA	NA
WP_005746894.1\|3362116_3363079_+	LLM class oxidoreductase	NA	NA	NA	NA
WP_005746895.1\|3363160_3364339_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_005746896.1\|3364388_3365246_-	hypothetical protein	NA	NA	NA	NA
WP_005746897.1\|3365242_3366016_-	hypothetical protein	NA	NA	NA	NA
WP_080164674.1\|3366088_3367060_-	2-nitropropane dioxygenase	NA	NA	NA	NA
WP_005746899.1\|3367137_3367500_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_016981910.1\|3367540_3368023_-	flavin reductase family protein	NA	NA	NA	NA
WP_005746901.1\|3368100_3368814_-	hypothetical protein	NA	NA	NA	NA
WP_005746902.1\|3368797_3369988_-	isocitrate/isopropylmalate dehydrogenase family protein	NA	NA	NA	NA
WP_005746903.1\|3369984_3371013_-	nucleoid-structuring protein H-NS	E5EQ69	Micromonas_sp._RCC1109_virus	5.9e-14	23.4
WP_029240987.1\|3371290_3372115_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_044299896.1\|3372738_3373239_-	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|3374225_3375203_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_004663854.1\|3375309_3376413_-\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_007247761.1\|3376619_3377597_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_054068148.1\|3378313_3378601_+	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|3378668_3379646_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

3467627 : 3477469

uncultured_Caudovirales_phage(25.0%)

integrase

attL 3462302:3462316|attR 3478929:3478943

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3462302:3462316	attL	NA	NA	NA	NA
WP_005745890.1\|3467627_3468236_+	hypothetical protein	A0A2H4JC30	uncultured_Caudovirales_phage	1.4e-50	49.3
WP_080164683.1\|3468952_3469564_+	DUF1566 domain-containing protein	NA	NA	NA	NA
WP_080164684.1\|3469640_3470258_+	DUF1566 domain-containing protein	H2BDH2	Pseudomonas_virus	1.6e-14	29.4
WP_005745887.1\|3470309_3470666_+	four helix bundle protein	NA	NA	NA	NA
WP_101166014.1\|3470972_3472040_+	RNA-directed DNA polymerase	A0A0N7AE80	Bacillus_phage	4.7e-46	34.5
WP_054068780.1\|3472085_3472574_+	HNH endonuclease	A0A1J0GWA4	Alteromonas_phage	3.3e-31	44.2
WP_080164685.1\|3472744_3473287_+	hypothetical protein	NA	NA	NA	NA
WP_005741215.1\|3473713_3474106_+	ASCH domain-containing protein	A0A291AUQ6	Sinorhizobium_phage	1.6e-28	46.9
WP_005741214.1\|3474102_3474291_+	hypothetical protein	NA	NA	NA	NA
WP_080164915.1\|3474339_3475074_+	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.8e-118	76.2
WP_005746767.1\|3475397_3476582_+\|integrase	tyrosine-type recombinase/integrase	A0A059VF45	Pseudomonas_phage	3.8e-222	96.2
WP_002553165.1\|3476829_3477186_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_002553164.1\|3477166_3477469_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	1.8e-11	38.9
3478929:3478943	attR	NA	NA	NA	NA

DBSCAN-SWA_14

3783542 : 3838198

Pseudomonas_phage(12.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007247761.1\|3783542_3784520_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_005746804.1\|3785467_3787054_-	glucan biosynthesis protein D	NA	NA	NA	NA
WP_005746803.1\|3787149_3788169_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_080164700.1\|3788673_3789060_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_007247761.1\|3789127_3790105_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_007247761.1\|3790340_3791318_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_080164701.1\|3791546_3792476_-	hypothetical protein	NA	NA	NA	NA
WP_005744395.1\|3793400_3793757_+	hypothetical protein	NA	NA	NA	NA
WP_005744394.1\|3793734_3794862_-	sensor histidine kinase	A0A1B0VMK3	Pseudomonas_phage	5.0e-123	60.3
WP_002552903.1\|3794996_3795236_-	hypothetical protein	NA	NA	NA	NA
WP_029241055.1\|3795314_3795758_-	RulA protein	A0A1L5C2A3	Pseudoalteromonas_phage	2.9e-10	33.7
WP_029241056.1\|3795892_3797137_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_005744390.1\|3797377_3799747_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_004659848.1\|3799955_3800882_+	transaldolase	A0A1D7SEQ4	Cyanophage	6.5e-12	34.4
WP_002552898.1\|3800967_3801453_-	STAS domain-containing protein	NA	NA	NA	NA
WP_002552897.1\|3801449_3802634_-	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_005744387.1\|3802901_3803201_+	PilZ domain-containing protein	NA	NA	NA	NA
WP_004659844.1\|3803289_3803991_-	VacJ family lipoprotein	NA	NA	NA	NA
WP_005744386.1\|3804189_3804798_+	hypothetical protein	NA	NA	NA	NA
WP_005744385.1\|3804901_3805171_+	DUF4404 family protein	NA	NA	NA	NA
WP_005744383.1\|3805426_3806257_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	2.4e-37	37.2
WP_005744382.1\|3806386_3807631_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA
WP_002552890.1\|3807708_3808407_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	4.7e-39	42.1
WP_005744380.1\|3808399_3809650_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA
WP_002552888.1\|3809752_3810340_+	PilZ domain-containing protein	NA	NA	NA	NA
WP_005744379.1\|3810412_3811135_+	glycerophosphodiester phosphodiesterase	A0A292GJA3	Xanthomonas_phage	2.1e-05	38.6
WP_004664563.1\|3811177_3812572_-	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA
WP_005744378.1\|3812738_3813731_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_005744377.1\|3814148_3815441_+	MFS transporter	Q6JIH2	Burkholderia_virus	3.3e-70	38.7
WP_005744375.1\|3815525_3816788_-	MFS transporter	NA	NA	NA	NA
WP_005734450.1\|3816935_3818399_-	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_005734448.1\|3818589_3822042_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_004659810.1\|3822053_3822578_+	hypothetical protein	NA	NA	NA	NA
WP_004664558.1\|3822653_3825398_+	DEAD/DEAH box helicase	A8C6A2	Antheraea_pernyi_nuclear_polyhedrosis_virus	6.2e-42	29.4
WP_005744371.1\|3825410_3825977_-	cysteine hydrolase	NA	NA	NA	NA
WP_005744370.1\|3826091_3826841_+	3-oxoacyl-ACP reductase FabG	NA	NA	NA	NA
WP_004664555.1\|3827367_3827553_-	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|3827785_3828763_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_046835014.1\|3828897_3829377_-	DUF4365 domain-containing protein	NA	NA	NA	NA
WP_007247761.1\|3829825_3830803_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_005783010.1\|3831011_3831260_+	hypothetical protein	NA	NA	NA	NA
WP_003436656.1\|3831294_3831975_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_046835013.1\|3832077_3832848_+	DNA-binding transcriptional repressor DeoR	NA	NA	NA	NA
WP_046835012.1\|3832853_3833921_-	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_010197109.1\|3833917_3835249_-	L-fucose:H+ symporter permease	NA	NA	NA	NA
WP_046835011.1\|3835278_3836205_-	ribokinase	NA	NA	NA	NA
WP_004663854.1\|3837094_3838198_-\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

4106282 : 4162978

Morganella_phage(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007247761.1\|4106282_4107260_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_005743834.1\|4107452_4108649_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_004657811.1\|4108641_4109160_+	hypothetical protein	NA	NA	NA	NA
WP_005743832.1\|4109149_4109947_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_005743831.1\|4109946_4110804_+	iron-containing redox enzyme family protein	NA	NA	NA	NA
WP_002552658.1\|4110787_4111024_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_005743830.1\|4111065_4112247_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_005743829.1\|4112280_4113213_-	lipid A biosynthesis lauroyl acyltransferase	A0A1W6JP29	Morganella_phage	1.7e-47	35.9
WP_005743828.1\|4113333_4114074_+	septum site-determining protein MinC	NA	NA	NA	NA
WP_002552654.1\|4114305_4115118_+	septum site-determining protein MinD	NA	NA	NA	NA
WP_002552653.1\|4115117_4115372_+	cell division topological specificity factor MinE	NA	NA	NA	NA
WP_005743827.1\|4115462_4116098_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	3.7e-06	28.8
WP_002552650.1\|4116768_4118058_+	M18 family aminopeptidase	NA	NA	NA	NA
WP_046834972.1\|4118310_4122051_-	Ice nucleation protein	NA	NA	NA	NA
WP_005743821.1\|4122538_4123261_-	UTRA domain-containing protein	NA	NA	NA	NA
WP_002552647.1\|4123615_4124683_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_004657771.1\|4124761_4125568_+	alkaline phosphatase family protein	NA	NA	NA	NA
WP_002552645.1\|4125564_4126407_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_002552644.1\|4126393_4127191_+	ABC transporter permease	NA	NA	NA	NA
WP_002552643.1\|4127192_4128182_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.3e-33	36.3
WP_005743820.1\|4128292_4128946_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_005743819.1\|4128965_4129928_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
WP_046834971.1\|4130032_4132147_+	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	1.1e-102	34.0
WP_044299232.1\|4132264_4134037_+	EAL and GGDEF domain-containing protein	NA	NA	NA	NA
WP_002552638.1\|4134173_4134545_-	hypothetical protein	NA	NA	NA	NA
WP_004643821.1\|4134541_4134883_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002552636.1\|4134983_4135436_-	DUF1232 domain-containing protein	NA	NA	NA	NA
WP_005743816.1\|4135801_4136572_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_005743814.1\|4136778_4138188_-	DUF4329 domain-containing protein	NA	NA	NA	NA
WP_005743813.1\|4138434_4138953_+	hypothetical protein	NA	NA	NA	NA
WP_002552632.1\|4138963_4139884_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_005743812.1\|4140018_4141074_+	tartrate dehydrogenase	NA	NA	NA	NA
WP_005743811.1\|4141179_4142523_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_002552629.1\|4142524_4142902_-	VOC family protein	NA	NA	NA	NA
WP_005743810.1\|4142957_4144148_-	CoA transferase	NA	NA	NA	NA
WP_004643774.1\|4144266_4144662_-	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|4144916_4145894_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_004663854.1\|4146100_4147204_+\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_007247761.1\|4147310_4148288_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_005747138.1\|4148677_4149904_-	MFS transporter	A0A1B0RXG2	Streptococcus_phage	4.1e-06	21.4
WP_005747137.1\|4149983_4150661_-	RraA family protein	NA	NA	NA	NA
WP_005747136.1\|4150888_4151872_+	hydroxyacid dehydrogenase	M1I636	Acanthocystis_turfacea_Chlorella_virus	7.1e-25	36.2
WP_005747135.1\|4151954_4153280_+	MFS transporter	NA	NA	NA	NA
WP_005747133.1\|4153413_4154154_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002552626.1\|4155120_4156041_+	recombination-associated protein RdgC	L7TP07	Pseudomonas_virus	3.2e-120	69.9
WP_005747132.1\|4156130_4157078_+	bile acid:sodium symporter family protein	NA	NA	NA	NA
WP_002552624.1\|4157163_4159038_-	MFS transporter	NA	NA	NA	NA
WP_007247761.1\|4160162_4161140_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_052764762.1\|4161274_4161823_-	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|4162000_4162978_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

4296289 : 4355577

Aeromonas_phage(14.29%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007247761.1\|4296289_4297267_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_109724182.1\|4298173_4298278_-	DUF1534 domain-containing protein	NA	NA	NA	NA
WP_005744644.1\|4298314_4300705_-	RND family transporter	NA	NA	NA	NA
WP_044299385.1\|4300732_4301740_-	hypothetical protein	NA	NA	NA	NA
WP_005744646.1\|4302014_4303370_-	DUF1329 domain-containing protein	NA	NA	NA	NA
WP_002554493.1\|4303875_4305033_-	glutathionylspermidine synthase family protein	A0A219Y9C1	Aeromonas_phage	3.2e-64	38.8
WP_002554494.1\|4305044_4305791_-	DUF1190 domain-containing protein	NA	NA	NA	NA
WP_005744647.1\|4305818_4306244_-	DUF350 domain-containing protein	NA	NA	NA	NA
WP_005744648.1\|4306257_4306923_-	DUF2491 family protein	NA	NA	NA	NA
WP_002554497.1\|4307003_4307558_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_005744650.1\|4307588_4308296_-	phage shock protein A	NA	NA	NA	NA
WP_005744651.1\|4308322_4308976_-	YjfI family protein	NA	NA	NA	NA
WP_005744652.1\|4309212_4311879_-	aminopeptidase N	NA	NA	NA	NA
WP_004665926.1\|4311891_4312725_-	DUF2797 domain-containing protein	NA	NA	NA	NA
WP_002554502.1\|4312721_4312982_-	DUF1315 family protein	NA	NA	NA	NA
WP_005744653.1\|4313010_4313883_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_005744654.1\|4313879_4314851_-	ser/threonine protein phosphatase	NA	NA	NA	NA
WP_003409651.1\|4314850_4315741_-	NAD(+) kinase	NA	NA	NA	NA
WP_005744657.1\|4315977_4317117_+	hypothetical protein	NA	NA	NA	NA
WP_005744658.1\|4317113_4317545_+	hypothetical protein	NA	NA	NA	NA
WP_044299365.1\|4317626_4318610_+	DUF1853 family protein	NA	NA	NA	NA
WP_005744660.1\|4318575_4319856_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	3.2e-174	73.9
WP_005744661.1\|4319855_4321064_-	MFS transporter	NA	NA	NA	NA
WP_002554511.1\|4321373_4321685_+	DUF962 domain-containing protein	NA	NA	NA	NA
WP_005744662.1\|4321694_4322516_-	UDP-2,3-diacylglucosamine diphosphatase	A0A218MKA7	uncultured_virus	3.4e-65	46.4
WP_002554513.1\|4322608_4322911_-	SelT/SelW/SelH family protein	NA	NA	NA	NA
WP_005744663.1\|4322962_4323769_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.5e-24	33.5
WP_005744665.1\|4323771_4324629_-	ABC transporter permease	NA	NA	NA	NA
WP_002554516.1\|4324886_4325975_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_004657392.1\|4326036_4326942_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_005744666.1\|4327161_4327776_+	cysteine dioxygenase	NA	NA	NA	NA
WP_005744667.1\|4327772_4329356_+	rhodanese-related sulfurtransferase	NA	NA	NA	NA
WP_004667817.1\|4329412_4330402_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_080164730.1\|4330434_4331628_+	acyl-CoA/acyl-ACP dehydrogenase	NA	NA	NA	NA
WP_005744668.1\|4331635_4333906_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_005744670.1\|4333934_4334951_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005744671.1\|4335042_4335951_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002554527.1\|4336139_4336862_+	pirin family protein	NA	NA	NA	NA
WP_044299367.1\|4337027_4337450_+	cupin domain-containing protein	NA	NA	NA	NA
WP_019742402.1\|4338244_4339003_+	hypothetical protein	NA	NA	NA	NA
WP_005744672.1\|4339057_4339540_-	GAF domain-containing protein	NA	NA	NA	NA
WP_005744673.1\|4339536_4340427_-	ATP-binding protein	NA	NA	NA	NA
WP_046835210.1\|4340507_4342856_+	response regulator	A0A1V0SGX0	Hokovirus	2.6e-41	27.6
WP_004665941.1\|4342862_4343348_-	glutathione peroxidase	Q6VZR0	Canarypox_virus	5.2e-21	35.4
WP_005744677.1\|4343498_4343894_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_004657364.1\|4344084_4345296_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_005744678.1\|4345563_4346451_+\|protease	protease HtpX	NA	NA	NA	NA
WP_005744680.1\|4346775_4347543_+	dioxygenase	NA	NA	NA	NA
WP_005731303.1\|4347647_4349327_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.2e-48	32.1
WP_004657358.1\|4349396_4349588_-	hypothetical protein	NA	NA	NA	NA
WP_005744681.1\|4349781_4350543_-	hypothetical protein	NA	NA	NA	NA
WP_002554540.1\|4350714_4352061_+	3-deoxy-7-phosphoheptulonate synthase class II	NA	NA	NA	NA
WP_005744682.1\|4352079_4352313_-	DUF1127 domain-containing protein	NA	NA	NA	NA
WP_007247761.1\|4353136_4354114_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_007247761.1\|4354599_4355577_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

4402310 : 4465018

Bacillus_phage(20.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007247761.1\|4402310_4403288_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_080164734.1\|4403418_4403688_+	hypothetical protein	NA	NA	NA	NA
WP_162836993.1\|4404095_4405460_-	DNA recombination protein RmuC	NA	NA	NA	NA
WP_005744718.1\|4406207_4406513_+	hypothetical protein	NA	NA	NA	NA
WP_032074453.1\|4406987_4407212_+	hypothetical protein	NA	NA	NA	NA
WP_005744719.1\|4407463_4408738_+	outer membrane protein	NA	NA	NA	NA
WP_002554590.1\|4408982_4409534_-	glutathione peroxidase	NA	NA	NA	NA
WP_161798117.1\|4409714_4410914_-	MFS transporter	NA	NA	NA	NA
WP_005744721.1\|4411019_4411751_-	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
WP_005744722.1\|4411752_4412325_-	alpha-ribazole phosphatase family protein	NA	NA	NA	NA
WP_046835206.1\|4412321_4413374_-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
WP_005744724.1\|4413370_4413892_-	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	NA	NA	NA	NA
WP_005744725.1\|4413892_4415353_-	cobyric acid synthase	NA	NA	NA	NA
WP_005744726.1\|4415349_4416354_-	threonine-phosphate decarboxylase	NA	NA	NA	NA
WP_005744727.1\|4416346_4417255_-	cobalamin biosynthesis protein	NA	NA	NA	NA
WP_005744729.1\|4417251_4417902_-	5,6-dimethylbenzimidazole synthase	NA	NA	NA	NA
WP_005744731.1\|4417898_4419194_-	cobyrinate a,c-diamide synthase	NA	NA	NA	NA
WP_002554602.1\|4419233_4419845_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_005744732.1\|4420269_4421598_+	sorbosone dehydrogenase family protein	NA	NA	NA	NA
WP_109724161.1\|4421638_4421764_+	DUF1534 domain-containing protein	NA	NA	NA	NA
WP_109724179.1\|4421727_4421940_+	DUF1534 domain-containing protein	NA	NA	NA	NA
WP_004657225.1\|4421906_4422452_-	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	6.5e-20	39.1
WP_002554605.1\|4422542_4423265_-	C40 family peptidase	A0A0A8WF62	Clostridium_phage	9.3e-14	34.9
WP_005744733.1\|4423340_4424105_-	NAD-dependent deacylase	A0A2I2L319	Orpheovirus	2.0e-22	31.8
WP_002554607.1\|4424098_4424803_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA
WP_005744734.1\|4425020_4426094_-	AI-2E family transporter	NA	NA	NA	NA
WP_005744735.1\|4426132_4427236_-	DUF2066 domain-containing protein	NA	NA	NA	NA
WP_002554610.1\|4427577_4428636_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FC27	Synechococcus_phage	4.9e-72	43.6
WP_005783262.1\|4428635_4429286_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.0e-24	36.2
WP_005744738.1\|4429294_4430008_+	DUF3108 domain-containing protein	NA	NA	NA	NA
WP_002554613.1\|4430478_4430658_+	hypothetical protein	NA	NA	NA	NA
WP_005744739.1\|4430741_4431281_-	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_046835205.1\|4431311_4432145_-	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_004657204.1\|4432172_4434416_-	GTP diphosphokinase	NA	NA	NA	NA
WP_005744743.1\|4434572_4435928_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	F5CA72	Streptococcus_phi-m46.1-like_phage	2.0e-30	26.6
WP_005744744.1\|4435927_4436830_-	cysteine synthase CysM	A0A1X9I5K7	Streptococcus_phage	7.9e-55	40.4
WP_005744745.1\|4437082_4439836_+	response regulator	A0A1V0SGX0	Hokovirus	1.7e-47	29.2
WP_002554619.1\|4439945_4440383_+	hypothetical protein	NA	NA	NA	NA
WP_005744746.1\|4440379_4440787_+	META domain-containing protein	NA	NA	NA	NA
WP_005739010.1\|4441519_4441987_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_002554622.1\|4442116_4442470_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	4.8e-24	48.7
WP_005744747.1\|4442466_4443072_+	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA
WP_004657183.1\|4443174_4443846_+	3-methyladenine DNA glycosylase	NA	NA	NA	NA
WP_002554625.1\|4443852_4444677_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	5.3e-106	72.4
WP_002554626.1\|4444871_4445366_+\|protease	SprT family zinc-dependent metalloprotease	A0A2I7S9Y6	Vibrio_phage	2.8e-06	31.6
WP_005744748.1\|4445433_4446786_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_004665996.1\|4447245_4448592_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_002554629.1\|4448588_4449266_-	response regulator	NA	NA	NA	NA
WP_002554630.1\|4449293_4449644_-	hypothetical protein	NA	NA	NA	NA
WP_005744749.1\|4449816_4450605_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_044299379.1\|4450672_4451206_-\|transposase	transposase	NA	NA	NA	NA
WP_044299381.1\|4452143_4452878_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_044299383.1\|4452878_4453637_-	siderophore-iron reductase FhuF	NA	NA	NA	NA
WP_005744755.1\|4453594_4455205_-	HAMP domain-containing protein	W8CYF6	Bacillus_phage	5.6e-19	26.1
WP_161796206.1\|4455209_4455977_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.6e-32	34.4
WP_002554636.1\|4456662_4459575_+	ribonucleoside-diphosphate reductase subunit alpha	A0A2H4P767	Pseudomonas_phage	3.9e-180	46.4
WP_080164738.1\|4459898_4461146_+	ribonucleotide-diphosphate reductase subunit beta	U5Q1G6	Bacillus_phage	1.1e-30	27.4
WP_007247761.1\|4461614_4462592_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_007247761.1\|4462827_4463805_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_007247761.1\|4464040_4465018_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

5375282 : 5409800

Pseudomonas_phage(62.96%)

tail,plate,lysis,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010194979.1\|5375282_5376494_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
WP_005743959.1\|5376695_5378114_+	peptidoglycan DD-metalloendopeptidase family protein	A8ATH6	Listeria_phage	4.2e-18	44.7
WP_002551954.1\|5378117_5379212_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_002551953.1\|5379274_5379625_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	7.4e-25	50.5
WP_004663836.1\|5379724_5380759_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_004660765.1\|5380892_5381321_+	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA
WP_005743960.1\|5381429_5382338_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_005743961.1\|5382401_5383178_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_004660762.1\|5383281_5383620_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_004660761.1\|5383742_5384390_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA
WP_002551946.1\|5384466_5385261_-	adenosylmethionine decarboxylase	NA	NA	NA	NA
WP_005743963.1\|5385503_5385926_-	OsmC family protein	NA	NA	NA	NA
WP_005743964.1\|5386135_5386780_+	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA
WP_005743965.1\|5386791_5387487_-	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_002551942.1\|5387516_5388353_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.3e-69	56.2
WP_004663830.1\|5388349_5389399_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	6.9e-111	57.7
WP_002551940.1\|5389420_5390020_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.5e-73	64.7
WP_005743966.1\|5390429_5390939_-\|lysis	lysis protein	B5TK84	Pseudomonas_phage	5.1e-27	47.8
WP_005743968.1\|5390935_5391481_-	glycoside hydrolase family 19 protein	A0A2H4JHX4	uncultured_Caudovirales_phage	1.1e-67	71.1
WP_164513122.1\|5391578_5392637_-\|tail	phage tail protein	NA	NA	NA	NA
WP_005743970.1\|5392885_5393452_-\|tail	phage tail protein	B5TK80	Pseudomonas_phage	2.7e-45	46.9
WP_005743971.1\|5393459_5394920_-	hypothetical protein	B5TK79	Pseudomonas_phage	5.3e-85	40.2
WP_005743972.1\|5394930_5395530_-	DUF2313 domain-containing protein	B5TK76	Pseudomonas_phage	7.5e-86	72.4
WP_003372716.1\|5395517_5396558_-\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	1.6e-131	69.8
WP_005743973.1\|5396547_5396946_-	hypothetical protein	B5TK74	Pseudomonas_phage	3.1e-43	65.2
WP_005743975.1\|5396942_5397455_-\|plate	phage baseplate assembly protein	B5TK73	Pseudomonas_phage	5.6e-66	75.6
WP_004660747.1\|5397451_5398579_-	hypothetical protein	B5TK72	Pseudomonas_phage	7.2e-114	60.8
WP_005743977.1\|5398582_5400007_-	2-hydroxyacid dehydrogenase	B5TK71	Pseudomonas_phage	8.3e-107	43.9
WP_005743978.1\|5400003_5402148_-\|tail	phage tail tape measure protein	U5P420	Shigella_phage	2.1e-77	39.3
WP_002551919.1\|5402147_5402354_-	hypothetical protein	NA	NA	NA	NA
WP_002551918.1\|5402278_5402575_-\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	4.3e-34	77.4
WP_003316279.1\|5402571_5402919_-\|tail	phage tail protein	B5TK68	Pseudomonas_phage	8.6e-42	70.4
WP_046835280.1\|5402979_5404476_-\|tail	tail sheath protein	B5TK67	Pseudomonas_phage	2.9e-235	80.7
WP_005781028.1\|5404494_5404683_-	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	3.5e-13	72.3
WP_005743983.1\|5404679_5405270_-	hypothetical protein	B5TK65	Pseudomonas_phage	6.3e-53	52.6
WP_003372736.1\|5405315_5405654_-	hypothetical protein	A0A059VJW1	Pseudomonas_phage	9.0e-20	59.2
WP_003411734.1\|5405634_5406024_-	hypothetical protein	A0A059VK40	Pseudomonas_phage	2.3e-43	76.4
WP_046835281.1\|5406146_5407319_-	cellulase family glycosylhydrolase	NA	NA	NA	NA
WP_005733278.1\|5407321_5407516_-	Com family DNA-binding transcriptional regulator	B5TK59	Pseudomonas_phage	2.7e-13	92.1
WP_004642425.1\|5407788_5408232_-	hypothetical protein	A0A2H4J8A5	uncultured_Caudovirales_phage	6.0e-24	45.8
WP_005743987.1\|5408421_5409033_+	helix-turn-helix domain-containing protein	A0A0M4QWY1	Salmonella_phage	7.5e-49	48.7
WP_005743988.1\|5409187_5409436_+	DUF1654 domain-containing protein	NA	NA	NA	NA
WP_003316268.1\|5409557_5409800_+	transcriptional regulator	A0A2H4J8B4	uncultured_Caudovirales_phage	1.9e-16	51.2

DBSCAN-SWA_19

5521631 : 5545730

Bacillus_virus(20.0%)

protease,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002555598.1\|5521631_5522579_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002555599.1\|5522646_5523492_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_002555600.1\|5523488_5524667_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-25	36.4
WP_005744062.1\|5524936_5526187_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	2.9e-100	53.7
WP_002555602.1\|5526204_5527455_+	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
WP_002555603.1\|5527470_5527767_+	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_004663381.1\|5527763_5530784_+	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_004655930.1\|5530835_5531468_+	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_004655932.1\|5531713_5532571_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_005744064.1\|5532620_5533820_+	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	2.2e-12	27.7
WP_007247761.1\|5534332_5535310_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_054068171.1\|5536614_5537595_-	RHS repeat-associated core domain-containing protein	B6SD27	Bacteriophage	1.1e-28	40.2
WP_005744068.1\|5537825_5538389_+	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_004654799.1\|5538368_5539268_-	acyltransferase	NA	NA	NA	NA
WP_005735042.1\|5539461_5539965_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_005744070.1\|5540200_5540830_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_004654803.1\|5540899_5541082_-	hypothetical protein	NA	NA	NA	NA
WP_005744071.1\|5541078_5542212_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_005744072.1\|5542333_5543317_-	FecR family protein	NA	NA	NA	NA
WP_005744073.1\|5543313_5543832_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_005744074.1\|5544023_5545730_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	3.2e-49	29.0

DBSCAN-SWA_20

5743351 : 5804987

uncultured_Caudovirales_phage(23.08%)

plate,protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004654939.1\|5743351_5744806_+\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_002555714.1\|5744950_5746771_+	translational GTPase TypA	NA	NA	NA	NA
WP_002555713.1\|5746882_5747704_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.7e-46	43.5
WP_005745101.1\|5747827_5748601_-	L-iditol 2-dehydrogenase	NA	NA	NA	NA
WP_080164821.1\|5748640_5749957_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005745103.1\|5750237_5751137_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004654928.1\|5751137_5752397_-	sodium:proton antiporter	A0A2H4J178	uncultured_Caudovirales_phage	3.0e-108	85.6
WP_004663292.1\|5752676_5753006_-	DUF2790 domain-containing protein	NA	NA	NA	NA
WP_004663296.1\|5753223_5753448_+	hypothetical protein	NA	NA	NA	NA
WP_005745104.1\|5753899_5755225_+	OprD family porin	NA	NA	NA	NA
WP_005745105.1\|5755383_5755704_+	hypothetical protein	NA	NA	NA	NA
WP_044299412.1\|5757029_5757758_-	hypothetical protein	NA	NA	NA	NA
WP_007247761.1\|5758883_5759861_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_005781640.1\|5760324_5760660_-	hypothetical protein	A0A0U4IBV2	Pseudomonas_phage	6.0e-24	64.0
WP_046835105.1\|5760632_5761343_-	hypothetical protein	A0A2I7RNK1	Vibrio_phage	1.3e-36	38.2
WP_160309133.1\|5761714_5762518_+\|protease	YopT-type cysteine protease domain-containing protein	NA	NA	NA	NA
WP_005741057.1\|5762921_5763320_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_005741056.1\|5763444_5764191_+	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_007247761.1\|5764394_5765372_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_007247761.1\|5766428_5767406_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_044299855.1\|5767716_5768247_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_005746667.1\|5768476_5769091_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_005746665.1\|5769194_5769536_-	hypothetical protein	NA	NA	NA	NA
WP_005746664.1\|5769725_5770148_+	DUF1493 family protein	NA	NA	NA	NA
WP_005746663.1\|5770699_5771785_+	hypothetical protein	A0A1S5SAB0	Streptococcus_phage	2.6e-68	39.9
WP_005746662.1\|5771928_5772666_+	hypothetical protein	NA	NA	NA	NA
WP_080164823.1\|5772572_5772953_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	2.3e-32	84.1
WP_005746660.1\|5772942_5773182_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	A0A2H4JBG1	uncultured_Caudovirales_phage	5.7e-29	81.0
WP_005746659.1\|5773345_5773819_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_005746658.1\|5773919_5774468_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_164513123.1\|5774627_5775122_+	hypothetical protein	NA	NA	NA	NA
WP_004667253.1\|5775155_5776430_-	OprD family porin	NA	NA	NA	NA
WP_005746654.1\|5777101_5778208_-	agmatine deiminase	A7IVE6	Paramecium_bursaria_Chlorella_virus	2.7e-105	50.6
WP_004654103.1\|5778213_5779092_-	N-carbamoylputrescine amidase	A7IVZ1	Paramecium_bursaria_Chlorella_virus	6.1e-76	48.1
WP_134931317.1\|5779256_5779349_-	DUF1534 domain-containing protein	NA	NA	NA	NA
WP_005746653.1\|5779516_5782429_-	aminotransferase	A0A1V0SKB7	Klosneuvirus	1.0e-18	24.3
WP_005746652.1\|5782669_5783752_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.4e-98	53.6
WP_005746651.1\|5783832_5784378_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.6e-53	58.0
WP_044299850.1\|5784542_5786360_+	sensor histidine kinase	NA	NA	NA	NA
WP_005746648.1\|5786356_5787742_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_005746647.1\|5787728_5788202_+	thioesterase	NA	NA	NA	NA
WP_005746645.1\|5788577_5789420_-	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_005734101.1\|5789416_5789983_-	ADP compounds hydrolase NudE	NA	NA	NA	NA
WP_002551431.1\|5790079_5790757_+	GMP/IMP nucleotidase	NA	NA	NA	NA
WP_002551430.1\|5790798_5791680_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002551429.1\|5791783_5792620_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_005734100.1\|5792616_5794953_+	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA
WP_002551428.1\|5795162_5795624_+	hypothetical protein	NA	NA	NA	NA
WP_005746640.1\|5795682_5797611_-	RecQ family ATP-dependent DNA helicase	F2NZ48	Diadromus_pulchellus_ascovirus	7.6e-55	40.7
WP_005746639.1\|5797786_5798608_+	hypothetical protein	NA	NA	NA	NA
WP_155008515.1\|5798772_5799084_+	hypothetical protein	NA	NA	NA	NA
WP_125856974.1\|5799108_5799288_+	hypothetical protein	NA	NA	NA	NA
WP_003401916.1\|5799772_5800522_+	hypothetical protein	NA	NA	NA	NA
WP_005734097.1\|5800590_5801124_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_005746638.1\|5801138_5802641_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_005734095.1\|5802672_5803155_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_044299854.1\|5803154_5804987_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP020351

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection