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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017694 Geobacillus thermodenitrificans strain KCTC3902 chromosome, complete genome 4 crisprs cas3,DEDDh,csa3,cas6,DinG,c2c9_V-U4 0 2 9 0

Results visualization

1. NZ_CP017694
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017694_1 494645-494748 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017694_2 1479311-1479551 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017694_3 1508399-1508828 Unclear NA
6 spacers
cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017694_4 1509808-1509901 Unclear NA
1 spacers
cas6

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP017694_2 2.7|1479418|26|NZ_CP017694|PILER-CR 1479418-1479443 26 NC_014533 Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence 312652-312677 5 0.808
NZ_CP017694_2 2.2|1479413|32|NZ_CP017694|CRISPRCasFinder 1479413-1479444 32 NC_014533 Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence 312650-312681 10 0.688

1. spacer 2.7|1479418|26|NZ_CP017694|PILER-CR matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 5, identity: 0.808

cggttttacaattcgttatacacaat	CRISPR spacer
gcgttttacaattctttatacataac	Protospacer
  ************ *******.**.

2. spacer 2.2|1479413|32|NZ_CP017694|CRISPRCasFinder matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 10, identity: 0.688

agaacggttttacaattcgttatacacaataa	CRISPR spacer
gtgggcgttttacaattctttatacataacag	Protospacer
. ..  ************ *******.**.*.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 974898 : 984730 7 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_2 1550777 : 1559160 8 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_3 1859621 : 1869416 8 Streptococcus_phage(16.67%) NA NA
DBSCAN-SWA_4 2310242 : 2357442 66 Geobacillus_virus(19.51%) protease,capsid,portal,integrase,coat,terminase,tail,head attL 2309963:2309977|attR 2336217:2336231
DBSCAN-SWA_5 2361168 : 2367289 8 Geobacillus_virus(33.33%) NA NA
DBSCAN-SWA_6 2481574 : 2490789 13 Staphylococcus_phage(57.14%) holin NA
DBSCAN-SWA_7 2860489 : 2911902 68 Geobacillus_phage(20.0%) protease,capsid,portal,terminase,tail,holin,head NA
DBSCAN-SWA_8 3051155 : 3061635 12 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_9 3123782 : 3134488 13 Pandoravirus(25.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage