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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP016705 Lactococcus lactis subsp. lactis strain UL8 plasmid pUL8B, complete sequence 0 crisprs csa3 0 0 1 0
NZ_CP015908 Lactococcus lactis subsp. lactis strain UL8 chromosome, complete genome 0 crisprs DEDDh,cas3,csa3,DinG 0 0 12 0
NZ_CP016706 Lactococcus lactis subsp. lactis strain UL8 plasmid pUL8C, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP016704 Lactococcus lactis subsp. lactis strain UL8 plasmid pUL8A, complete sequence 0 crisprs csa3 0 0 0 0

Results visualization

1. NZ_CP016705
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 8090 : 13377 8 Streptococcus_phage(50.0%) transposase,integrase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP015908
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 35152 : 49355 25 Lactococcus_phage(100.0%) terminase,bacteriocin,integrase attL 34544:34571|attR 49464:49491
DBSCAN-SWA_2 259193 : 267332 8 Lactococcus_phage(42.86%) transposase NA
DBSCAN-SWA_3 415523 : 427654 14 Streptococcus_phage(40.0%) tRNA NA
DBSCAN-SWA_4 485562 : 499035 25 Lactococcus_phage(92.0%) protease,head,transposase,integrase attL 485820:485848|attR 501402:501430
DBSCAN-SWA_5 969119 : 982904 12 Enterococcus_phage(25.0%) NA NA
DBSCAN-SWA_6 991562 : 1044429 71 Lactococcus_phage(82.26%) holin,portal,capsid,terminase,tail,transposase NA
DBSCAN-SWA_7 1132594 : 1181948 45 unidentified_phage(16.67%) protease,transposase,tRNA,integrase attL 1162703:1162721|attR 1194131:1194149
DBSCAN-SWA_8 1334436 : 1434165 106 Lactococcus_phage(78.33%) holin,integrase,portal,capsid,terminase,tail,head,protease,transposase attL 1419444:1419460|attR 1436710:1436726
DBSCAN-SWA_9 1770233 : 1786483 21 Lactococcus_phage(100.0%) integrase attL 1768771:1768786|attR 1782738:1782753
DBSCAN-SWA_10 1903423 : 1984547 95 Lactococcus_phage(74.07%) holin,portal,tRNA,capsid,terminase,tail,head,protease,transposase NA
DBSCAN-SWA_11 2192470 : 2235546 53 Lactococcus_phage(95.74%) holin,portal,capsid,terminase,tail,transposase NA
DBSCAN-SWA_12 2318078 : 2334696 23 Lactococcus_phage(90.0%) protease,head,integrase attL 2314648:2314664|attR 2340519:2340535
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage