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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP020805 Bacillus velezensis strain 9D-6 chromosome, complete genome 1 crisprs cas3,csa3,DinG,casR,DEDDh 0 1 9 0

Results visualization

1. NZ_CP020805
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020805_1 3092920-3093021 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP020805_1 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder 3092958-3092983 26 MH616750 Microviridae sp. isolate ctcj929, complete genome 555-580 3 0.885
NZ_CP020805_1 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder 3092958-3092983 26 NZ_CP024320 Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp41, complete sequence 17742-17767 4 0.846
NZ_CP020805_1 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder 3092958-3092983 26 NZ_CP024354 Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-1, complete sequence 29390-29415 4 0.846
NZ_CP020805_1 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder 3092958-3092983 26 NZ_CP024374 Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp41, complete sequence 33573-33598 4 0.846
NZ_CP020805_1 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder 3092958-3092983 26 NZ_CP024393 Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp41, complete sequence 14433-14458 4 0.846
NZ_CP020805_1 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder 3092958-3092983 26 NZ_CP024208 Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp41, complete sequence 14471-14496 4 0.846
NZ_CP020805_1 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder 3092958-3092983 26 NZ_CP024336 Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp41, complete sequence 14618-14643 4 0.846
NZ_CP020805_1 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder 3092958-3092983 26 NZ_CP024355 Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-2, complete sequence 14471-14496 4 0.846

1. spacer 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder matches to MH616750 (Microviridae sp. isolate ctcj929, complete genome) position: , mismatch: 3, identity: 0.885

caaaaggggatgggaaaagaattact	CRISPR spacer
aaaaagggcatgggaaaaggattact	Protospacer
 ******* **********.******

2. spacer 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder matches to NZ_CP024320 (Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp41, complete sequence) position: , mismatch: 4, identity: 0.846

caaaaggggatgggaaaagaattact	CRISPR spacer
caaaaggtgatggcaaaagaatttca	Protospacer
******* ***** ********* * 

3. spacer 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder matches to NZ_CP024354 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-1, complete sequence) position: , mismatch: 4, identity: 0.846

caaaaggggatgggaaaagaattact	CRISPR spacer
caaaaggtgatggcaaaagaatttca	Protospacer
******* ***** ********* * 

4. spacer 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder matches to NZ_CP024374 (Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp41, complete sequence) position: , mismatch: 4, identity: 0.846

caaaaggggatgggaaaagaattact	CRISPR spacer
caaaaggtgatggcaaaagaatttca	Protospacer
******* ***** ********* * 

5. spacer 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder matches to NZ_CP024393 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp41, complete sequence) position: , mismatch: 4, identity: 0.846

caaaaggggatgggaaaagaattact	CRISPR spacer
caaaaggtgatggcaaaagaatttca	Protospacer
******* ***** ********* * 

6. spacer 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder matches to NZ_CP024208 (Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp41, complete sequence) position: , mismatch: 4, identity: 0.846

caaaaggggatgggaaaagaattact	CRISPR spacer
caaaaggtgatggcaaaagaatttca	Protospacer
******* ***** ********* * 

7. spacer 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder matches to NZ_CP024336 (Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp41, complete sequence) position: , mismatch: 4, identity: 0.846

caaaaggggatgggaaaagaattact	CRISPR spacer
caaaaggtgatggcaaaagaatttca	Protospacer
******* ***** ********* * 

8. spacer 1.1|3092958|26|NZ_CP020805|CRISPRCasFinder matches to NZ_CP024355 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-2, complete sequence) position: , mismatch: 4, identity: 0.846

caaaaggggatgggaaaagaattact	CRISPR spacer
caaaaggtgatggcaaaagaatttca	Protospacer
******* ***** ********* * 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 173575 : 218696 47 Cafeteria_roenbergensis_virus(11.11%) protease,coat NA
DBSCAN-SWA_2 1158044 : 1167935 9 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 1631299 : 1664907 37 Planktothrix_phage(16.67%) coat,tRNA NA
DBSCAN-SWA_4 1735490 : 1745926 17 uncultured_Caudovirales_phage(38.46%) holin,portal NA
DBSCAN-SWA_5 2302544 : 2308758 7 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_6 2581209 : 2594216 16 Bacillus_phage(90.0%) NA NA
DBSCAN-SWA_7 2627251 : 2693779 77 Bacillus_phage(39.53%) coat,head,capsid,portal,tail,plate,protease,terminase,tRNA,holin,integrase attL 2644739:2644757|attR 2684708:2684726
DBSCAN-SWA_8 2770710 : 2776964 9 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_9 3425451 : 3494780 65 Bacillus_phage(48.0%) head,capsid,portal,tail,holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage