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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP020827 Listeria monocytogenes strain CFSAN028538 chromosome, complete genome 4 crisprs DinG,cas3,WYL,casR,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,RT,DEDDh,csa3 6 35 6 2

Results visualization

1. NZ_CP020827
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020827_1 526529-527207 Unclear I-A
10 spacers
cas6,cas8b2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020827_2 543633-547436 Unclear I-A
58 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020827_3 2544719-2544880 Orphan NA
1 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020827_4 2809716-2809826 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP020827_1 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527079-527114 36 NZ_CP020827.1 1271511-1271546 0 1.0
NZ_CP020827_2 2.16|544640|38|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544640-544677 38 NZ_CP020827.1 2384046-2384083 0 1.0
NZ_CP020827_2 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546465-546500 36 NZ_CP020827.1 1260750-1260785 0 1.0
NZ_CP020827_2 2.49|546790|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546790-546826 37 NZ_CP020827.1 1259169-1259205 0 1.0
NZ_CP020827_1 1.8|527015|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527015-527049 35 NZ_CP020827.1 1291048-1291082 1 0.971
NZ_CP020827_2 2.17|544707|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544707-544743 37 NZ_CP020827.1 1283989-1284025 1 0.973

1. spacer 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to position: 1271511-1271546, mismatch: 0, identity: 1.0

aaaataggaggaaataaattatgactatcaaattaa	CRISPR spacer
aaaataggaggaaataaattatgactatcaaattaa	Protospacer
************************************

2. spacer 2.16|544640|38|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to position: 2384046-2384083, mismatch: 0, identity: 1.0

caaagcaagtacagaagcgtattatgctctattagagt	CRISPR spacer
caaagcaagtacagaagcgtattatgctctattagagt	Protospacer
**************************************

3. spacer 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to position: 1260750-1260785, mismatch: 0, identity: 1.0

gttgaaaagcgcaccattgttttaatttttttaatt	CRISPR spacer
gttgaaaagcgcaccattgttttaatttttttaatt	Protospacer
************************************

4. spacer 2.49|546790|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to position: 1259169-1259205, mismatch: 0, identity: 1.0

tcgttaatcataattgatgaaagtcatcatgtgttag	CRISPR spacer
tcgttaatcataattgatgaaagtcatcatgtgttag	Protospacer
*************************************

5. spacer 1.8|527015|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to position: 1291048-1291082, mismatch: 1, identity: 0.971

ctaaaacatccttcactgtatcaactcctttctat	CRISPR spacer
ctaaaacatccttcactgtctcaactcctttctat	Protospacer
******************* ***************

6. spacer 2.17|544707|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to position: 1283989-1284025, mismatch: 1, identity: 0.973

atttaagtattaatgtttttaaaaagtttgatttatt	CRISPR spacer
atttaagtattaatgtttttaaaaagtctgatttatt	Protospacer
***************************.*********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP020827_1 1.4|526759|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526759-526793 35 NZ_LR134403 Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence 214611-214645 0 1.0
NZ_CP020827_1 1.4|526759|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526759-526793 35 MT500540 Listeria phage LP-HM00113468, complete genome 39834-39868 0 1.0
NZ_CP020827_1 1.4|526759|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526759-526793 35 KJ094023 Listeria phage LP-101, complete genome 5084-5118 0 1.0
NZ_CP020827_1 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527079-527114 36 MT500540 Listeria phage LP-HM00113468, complete genome 683-718 0 1.0
NZ_CP020827_1 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527079-527114 36 NC_009812 Listeria phage B025, complete genome 3896-3931 0 1.0
NZ_CP020827_1 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527079-527114 36 KJ094023 Listeria phage LP-101, complete genome 3936-3971 0 1.0
NZ_CP020827_1 1.10|527144|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527144-527178 35 DQ003642 Listeria phage A006, complete genome 15712-15746 0 1.0
NZ_CP020827_2 2.9|544180|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544180-544216 37 NC_009813 Listeria phage B054, complete genome 37396-37432 0 1.0
NZ_CP020827_2 2.23|545103|34|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545103-545136 34 NC_003216 Listeria phage A118, complete genome 31160-31193 0 1.0
NZ_CP020827_2 2.23|545103|34|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545103-545136 34 AJ242593 Bacteriophage A118 complete genome 31160-31193 0 1.0
NZ_CP020827_2 2.23|545103|34|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545103-545136 34 MH341451 Listeria phage PSU-VKH-LP019, complete genome 27908-27941 0 1.0
NZ_CP020827_2 2.24|545166|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545166-545200 35 NZ_CP011399 Listeria monocytogenes strain CFSAN008100 plasmid pCFSAN008100, complete sequence 2235-2269 0 1.0
NZ_CP020827_2 2.24|545166|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545166-545200 35 DQ003642 Listeria phage A006, complete genome 18012-18046 0 1.0
NZ_CP020827_2 2.25|545230|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545230-545266 37 NC_003216 Listeria phage A118, complete genome 38899-38935 0 1.0
NZ_CP020827_2 2.25|545230|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545230-545266 37 AJ242593 Bacteriophage A118 complete genome 38899-38935 0 1.0
NZ_CP020827_2 2.25|545230|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545230-545266 37 DQ003642 Listeria phage A006, complete genome 36194-36230 0 1.0
NZ_CP020827_2 2.27|545361|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545361-545397 37 KP399678 Listeria phage vB_LmoS_293, complete genome 29179-29215 0 1.0
NZ_CP020827_2 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546465-546500 36 NC_021539 Listeria phage LP-030-2, complete genome 32865-32900 0 1.0
NZ_CP020827_2 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546465-546500 36 NC_009812 Listeria phage B025, complete genome 37685-37720 0 1.0
NZ_CP020827_2 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546465-546500 36 KJ094023 Listeria phage LP-101, complete genome 38525-38560 0 1.0
NZ_CP020827_2 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546530-546566 37 MH299806 Listeria phage LP-KV022, complete genome 50264-50300 0 1.0
NZ_CP020827_2 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546530-546566 37 MN114083 Listeria phage LP-013, complete genome 45785-45821 0 1.0
NZ_CP020827_2 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546530-546566 37 NC_021785 Listeria phage LP-110, complete genome 7982-8018 0 1.0
NZ_CP020827_2 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546530-546566 37 MN128593 Listeria phage LP-031, complete genome 45080-45116 0 1.0
NZ_CP020827_2 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546530-546566 37 MN904502 Listeria phage LP-018, complete genome 45239-45275 0 1.0
NZ_CP020827_2 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546530-546566 37 KJ094021 Listeria phage LP-114, complete genome 35521-35557 0 1.0
NZ_CP020827_2 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546530-546566 37 MN114082 Listeria phage LP-010, complete genome 45070-45106 0 1.0
NZ_CP020827_2 2.49|546790|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546790-546826 37 NZ_LR134403 Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence 202696-202732 0 1.0
NZ_CP020827_2 2.49|546790|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546790-546826 37 KJ094023 Listeria phage LP-101, complete genome 36939-36975 0 1.0
NZ_CP020827_1 1.6|526888|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526888-526922 35 MH341453 Listeria phage PSU-VKH-LP041, complete genome 10139-10173 1 0.971
NZ_CP020827_1 1.8|527015|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527015-527049 35 NC_021539 Listeria phage LP-030-2, complete genome 18926-18960 1 0.971
NZ_CP020827_1 1.8|527015|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527015-527049 35 KJ094023 Listeria phage LP-101, complete genome 22882-22916 1 0.971
NZ_CP020827_1 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527079-527114 36 NZ_LR134403 Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence 213463-213498 1 0.972
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 JB137888 Sequence 7 from Patent WO2012159774 44325-44361 1 0.973
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 KJ094025 Listeria phage LP-032 contig 2, partial genome 33696-33732 1 0.973
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 NC_021787 Listeria phage LP-037, complete genome 26196-26232 1 0.973
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 JX442241 Listeria phage P70, complete genome 9319-9355 1 0.973
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 KJ094020 Listeria phage LP-026, complete genome 53366-53402 1 0.973
NZ_CP020827_2 2.17|544707|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544707-544743 37 NZ_LR134403 Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence 225937-225973 1 0.973
NZ_CP020827_2 2.17|544707|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544707-544743 37 NZ_CP011399 Listeria monocytogenes strain CFSAN008100 plasmid pCFSAN008100, complete sequence 577-613 1 0.973
NZ_CP020827_2 2.17|544707|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544707-544743 37 KJ094023 Listeria phage LP-101, complete genome 16410-16446 1 0.973
NZ_CP020827_2 2.22|545039|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545039-545073 35 MN904502 Listeria phage LP-018, complete genome 46274-46308 1 0.971
NZ_CP020827_2 2.22|545039|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545039-545073 35 JX442241 Listeria phage P70, complete genome 52734-52768 1 0.971
NZ_CP020827_2 2.25|545230|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545230-545266 37 MH341451 Listeria phage PSU-VKH-LP019, complete genome 37088-37124 1 0.973
NZ_CP020827_2 2.27|545361|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545361-545397 37 DQ003637 Listeria phage A500, complete genome 28158-28194 1 0.973
NZ_CP020827_2 2.27|545361|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545361-545397 37 KP399677 Listeria phage vB_LmoS_188, complete genome 27810-27846 1 0.973
NZ_CP020827_2 2.29|545492|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545492-545526 35 JX442241 Listeria phage P70, complete genome 52280-52314 1 0.971
NZ_CP020827_2 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545622-545656 35 JB137888 Sequence 7 from Patent WO2012159774 3663-3697 1 0.971
NZ_CP020827_2 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545622-545656 35 MH299806 Listeria phage LP-KV022, complete genome 49650-49684 1 0.971
NZ_CP020827_2 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545622-545656 35 MN114083 Listeria phage LP-013, complete genome 45171-45205 1 0.971
NZ_CP020827_2 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545622-545656 35 NC_021785 Listeria phage LP-110, complete genome 7368-7402 1 0.971
NZ_CP020827_2 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545622-545656 35 MN128593 Listeria phage LP-031, complete genome 44466-44500 1 0.971
NZ_CP020827_2 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545622-545656 35 NC_021787 Listeria phage LP-037, complete genome 1834-1868 1 0.971
NZ_CP020827_2 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545622-545656 35 MN904502 Listeria phage LP-018, complete genome 44625-44659 1 0.971
NZ_CP020827_2 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545622-545656 35 JX442241 Listeria phage P70, complete genome 51085-51119 1 0.971
NZ_CP020827_2 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545622-545656 35 KJ094021 Listeria phage LP-114, complete genome 34907-34941 1 0.971
NZ_CP020827_2 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545622-545656 35 MN114082 Listeria phage LP-010, complete genome 44456-44490 1 0.971
NZ_CP020827_2 2.40|546204|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546204-546239 36 KJ094023 Listeria phage LP-101, complete genome 29149-29184 1 0.972
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 MH299806 Listeria phage LP-KV022, complete genome 51799-51833 1 0.971
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 NC_021785 Listeria phage LP-110, complete genome 9517-9551 1 0.971
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 MN128593 Listeria phage LP-031, complete genome 46615-46649 1 0.971
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 MN904502 Listeria phage LP-018, complete genome 46772-46806 1 0.971
NZ_CP020827_2 2.43|546399|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546399-546435 37 KJ094023 Listeria phage LP-101, complete genome 18674-18710 1 0.973
NZ_CP020827_2 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546465-546500 36 MT500540 Listeria phage LP-HM00113468, complete genome 10614-10649 1 0.972
NZ_CP020827_2 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546465-546500 36 NZ_LR134403 Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence 204282-204317 1 0.972
NZ_CP020827_2 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546465-546500 36 AJ312240 Bacteriophage PSA complete genome 32207-32242 1 0.972
NZ_CP020827_2 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546725-546760 36 JB137888 Sequence 7 from Patent WO2012159774 48996-49031 1 0.972
NZ_CP020827_2 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546725-546760 36 KJ094025 Listeria phage LP-032 contig 2, partial genome 38367-38402 1 0.972
NZ_CP020827_2 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546725-546760 36 MH299806 Listeria phage LP-KV022, complete genome 4649-4684 1 0.972
NZ_CP020827_2 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546725-546760 36 MN114083 Listeria phage LP-013, complete genome 64794-64829 1 0.972
NZ_CP020827_2 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546725-546760 36 NC_021785 Listeria phage LP-110, complete genome 27495-27530 1 0.972
NZ_CP020827_2 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546725-546760 36 MN128593 Listeria phage LP-031, complete genome 64602-64637 1 0.972
NZ_CP020827_2 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546725-546760 36 NC_021787 Listeria phage LP-037, complete genome 21526-21561 1 0.972
NZ_CP020827_2 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546725-546760 36 MN904502 Listeria phage LP-018, complete genome 64418-64453 1 0.972
NZ_CP020827_2 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546725-546760 36 JX442241 Listeria phage P70, complete genome 4649-4684 1 0.972
NZ_CP020827_2 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546725-546760 36 KJ094020 Listeria phage LP-026, complete genome 48696-48731 1 0.972
NZ_CP020827_2 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546725-546760 36 KJ094021 Listeria phage LP-114, complete genome 54645-54680 1 0.972
NZ_CP020827_2 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546725-546760 36 MN114082 Listeria phage LP-010, complete genome 63763-63798 1 0.972
NZ_CP020827_2 2.49|546790|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546790-546826 37 AJ312240 Bacteriophage PSA complete genome 30621-30657 1 0.973
NZ_CP020827_1 1.4|526759|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526759-526793 35 NC_009812 Listeria phage B025, complete genome 5044-5078 2 0.943
NZ_CP020827_1 1.6|526888|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526888-526922 35 NC_009813 Listeria phage B054, complete genome 10139-10173 2 0.943
NZ_CP020827_1 1.8|527015|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527015-527049 35 NC_009812 Listeria phage B025, complete genome 23381-23415 2 0.943
NZ_CP020827_2 2.2|543725|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 543725-543759 35 JB137888 Sequence 7 from Patent WO2012159774 2439-2473 2 0.943
NZ_CP020827_2 2.7|544050|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544050-544085 36 KJ094021 Listeria phage LP-114, complete genome 35818-35853 2 0.944
NZ_CP020827_2 2.9|544180|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544180-544216 37 MH341453 Listeria phage PSU-VKH-LP041, complete genome 37986-38022 2 0.946
NZ_CP020827_2 2.29|545492|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545492-545526 35 NC_021787 Listeria phage LP-037, complete genome 3029-3063 2 0.943
NZ_CP020827_2 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545622-545656 35 KJ094026 Listeria phage LP-032 contig 3, partial genome 13183-13217 2 0.943
NZ_CP020827_2 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545622-545656 35 KJ094020 Listeria phage LP-026, complete genome 27985-28019 2 0.943
NZ_CP020827_2 2.34|545813|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545813-545847 35 MH341453 Listeria phage PSU-VKH-LP041, complete genome 39753-39787 2 0.943
NZ_CP020827_2 2.34|545813|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545813-545847 35 NC_009813 Listeria phage B054, complete genome 39161-39195 2 0.943
NZ_CP020827_2 2.41|546269|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546269-546305 37 JQ797329 Listeria phage vB_LmoM_AG20, complete genome 7374-7410 2 0.946
NZ_CP020827_2 2.41|546269|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546269-546305 37 KJ535721 Listeria phage List-36, complete genome 122410-122446 2 0.946
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 JB137888 Sequence 7 from Patent WO2012159774 1514-1548 2 0.943
NZ_CP020827_2 2.43|546399|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546399-546435 37 NZ_LR134403 Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence 228202-228238 2 0.946
NZ_CP020827_2 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546530-546566 37 JB137888 Sequence 7 from Patent WO2012159774 3047-3083 2 0.946
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 MH299806 Listeria phage LP-KV022, complete genome 9319-9355 3 0.919
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 MN114083 Listeria phage LP-013, complete genome 3804-3840 3 0.919
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 NC_021785 Listeria phage LP-110, complete genome 32165-32201 3 0.919
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 MN128593 Listeria phage LP-031, complete genome 3804-3840 3 0.919
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 MN904502 Listeria phage LP-018, complete genome 3804-3840 3 0.919
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 KJ094021 Listeria phage LP-114, complete genome 59315-59351 3 0.919
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 MN114082 Listeria phage LP-010, complete genome 3804-3840 3 0.919
NZ_CP020827_2 2.40|546204|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546204-546239 36 MH341451 Listeria phage PSU-VKH-LP019, complete genome 32668-32703 3 0.917
NZ_CP020827_2 2.40|546204|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546204-546239 36 KP399677 Listeria phage vB_LmoS_188, complete genome 32868-32903 3 0.917
NZ_CP020827_2 2.40|546204|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546204-546239 36 KP399678 Listeria phage vB_LmoS_293, complete genome 34105-34140 3 0.917
NZ_CP020827_2 2.40|546204|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546204-546239 36 KP399678 Listeria phage vB_LmoS_293, complete genome 35152-35187 3 0.917
NZ_CP020827_2 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546530-546566 37 KJ094026 Listeria phage LP-032 contig 3, partial genome 12567-12603 3 0.919
NZ_CP020827_2 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546530-546566 37 NC_021787 Listeria phage LP-037, complete genome 2448-2484 3 0.919
NZ_CP020827_2 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546530-546566 37 JX442241 Listeria phage P70, complete genome 51699-51735 3 0.919
NZ_CP020827_2 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546530-546566 37 KJ094020 Listeria phage LP-026, complete genome 28599-28635 3 0.919
NZ_CP020827_2 2.47|546660|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546660-546695 36 KJ094020 Listeria phage LP-026, complete genome 27349-27384 3 0.917
NZ_CP020827_2 2.47|546660|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546660-546695 36 JB137888 Sequence 7 from Patent WO2012159774 4301-4336 3 0.917
NZ_CP020827_2 2.47|546660|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546660-546695 36 KJ094026 Listeria phage LP-032 contig 3, partial genome 13818-13853 3 0.917
NZ_CP020827_2 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544442-544476 35 MH299806 Listeria phage LP-KV022, complete genome 51195-51229 4 0.886
NZ_CP020827_2 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544442-544476 35 JB137888 Sequence 7 from Patent WO2012159774 2118-2152 4 0.886
NZ_CP020827_2 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544442-544476 35 MN114083 Listeria phage LP-013, complete genome 46716-46750 4 0.886
NZ_CP020827_2 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544442-544476 35 NC_021785 Listeria phage LP-110, complete genome 8913-8947 4 0.886
NZ_CP020827_2 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544442-544476 35 KJ094021 Listeria phage LP-114, complete genome 36721-36755 4 0.886
NZ_CP020827_2 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544442-544476 35 MN114082 Listeria phage LP-010, complete genome 46001-46035 4 0.886
NZ_CP020827_2 2.24|545166|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545166-545200 35 KJ094022 Listeria phage LP-030-3, complete genome 27891-27925 4 0.886
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 KJ094020 Listeria phage LP-026, complete genome 30134-30168 4 0.886
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 KJ094026 Listeria phage LP-032 contig 3, partial genome 11034-11068 4 0.886
NZ_CP020827_2 2.49|546790|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546790-546826 37 NC_021539 Listeria phage LP-030-2, complete genome 31281-31317 4 0.892
NZ_CP020827_1 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527079-527114 36 JN700520 Staphylococcus phage StB12, complete genome 6832-6867 5 0.861
NZ_CP020827_2 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544442-544476 35 NC_021787 Listeria phage LP-037, complete genome 3379-3413 5 0.857
NZ_CP020827_1 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526558-526599 42 MN114083 Listeria phage LP-013, complete genome 44286-44327 6 0.857
NZ_CP020827_1 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526558-526599 42 MN128593 Listeria phage LP-031, complete genome 43519-43560 6 0.857
NZ_CP020827_1 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526558-526599 42 JX442241 Listeria phage P70, complete genome 50135-50176 6 0.857
NZ_CP020827_1 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526558-526599 42 KJ094021 Listeria phage LP-114, complete genome 33960-34001 6 0.857
NZ_CP020827_1 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526558-526599 42 MN114082 Listeria phage LP-010, complete genome 43509-43550 6 0.857
NZ_CP020827_2 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT 547373-547407 35 MN694189 Marine virus AFVG_250M578, complete genome 47879-47913 6 0.829
NZ_CP020827_1 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526558-526599 42 JB137888 Sequence 7 from Patent WO2012159774 4606-4647 7 0.833
NZ_CP020827_1 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526558-526599 42 KJ094026 Listeria phage LP-032 contig 3, partial genome 14123-14164 7 0.833
NZ_CP020827_1 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526558-526599 42 MH299806 Listeria phage LP-KV022, complete genome 48765-48806 7 0.833
NZ_CP020827_1 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526558-526599 42 NC_021785 Listeria phage LP-110, complete genome 6483-6524 7 0.833
NZ_CP020827_1 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526558-526599 42 NC_021787 Listeria phage LP-037, complete genome 949-990 7 0.833
NZ_CP020827_1 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526558-526599 42 MN904502 Listeria phage LP-018, complete genome 43740-43781 7 0.833
NZ_CP020827_1 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526558-526599 42 KJ094020 Listeria phage LP-026, complete genome 27038-27079 7 0.833
NZ_CP020827_2 2.8|544115|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544115-544150 36 MN114083 Listeria phage LP-013, complete genome 48000-48035 7 0.806
NZ_CP020827_2 2.8|544115|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544115-544150 36 MN114082 Listeria phage LP-010, complete genome 47285-47320 7 0.806
NZ_CP020827_1 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527079-527114 36 MW084976 Bacillus phage Kirov, complete genome 27565-27600 8 0.778
NZ_CP020827_2 2.22|545039|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545039-545073 35 MN693074 Marine virus AFVG_25M380, complete genome 29085-29119 8 0.771
NZ_CP020827_2 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545686-545720 35 NZ_MF547664 Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence 23518-23552 8 0.771
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 AP014248 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S34-C282, *** SEQUENCING IN PROGRESS *** 2516-2550 9 0.743
NZ_CP020827_2 2.51|546921|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546921-546955 35 NZ_CP043831 Bacillus sp. BS98 plasmid unnamed1 257925-257959 9 0.743
NZ_CP020827_2 2.52|546985|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546985-547019 35 NC_014533 Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence 491525-491559 9 0.743
NZ_CP020827_2 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT 547373-547407 35 MK448625 Streptococcus satellite phage Javan738, complete genome 5960-5994 9 0.743
NZ_CP020827_2 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT 547373-547407 35 MK448449 Streptococcus satellite phage Javan356, complete genome 4490-4524 9 0.743
NZ_CP020827_2 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT 547373-547407 35 MK448636 Streptococcus satellite phage Javan749, complete genome 6112-6146 9 0.743
NZ_CP020827_2 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT 547373-547407 35 NZ_CP045037 Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence 34734-34768 9 0.743
NZ_CP020827_2 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT 547373-547407 35 NZ_CP018177 Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence 11325-11359 9 0.743
NZ_CP020827_2 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT 547373-547407 35 NZ_CP018181 Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence 63608-63642 9 0.743
NZ_CP020827_1 1.3|526694|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526694-526729 36 NZ_CP016330 Leuconostoc garlicum strain KFRI01 plasmid unnamed1, complete sequence 22971-23006 10 0.722
NZ_CP020827_1 1.3|526694|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526694-526729 36 NC_016821 Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE03, complete sequence 22403-22438 10 0.722
NZ_CP020827_1 1.3|526694|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526694-526729 36 NZ_CP014603 Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK3, complete sequence 16537-16572 10 0.722
NZ_CP020827_1 1.3|526694|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 526694-526729 36 NZ_CP014603 Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK3, complete sequence 41085-41120 10 0.722
NZ_CP020827_2 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 544376-544412 37 MK368614 Vibrio phage 2 TSL-2019, complete genome 30775-30811 10 0.73
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 NZ_CP046510 Erwinia sp. J780 plasmid pla1, complete sequence 17274-17308 10 0.714
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 NZ_CP045356 Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence 79653-79687 10 0.714
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 NZ_CP046163 Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence 1496861-1496895 10 0.714
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 NZ_CP046066 Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence 1680253-1680287 10 0.714
NZ_CP020827_1 1.10|527144|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527144-527178 35 NZ_CP029455 Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence 130632-130666 11 0.686
NZ_CP020827_1 1.10|527144|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527144-527178 35 NZ_CP015592 Bacillus cereus strain AR156 plasmid pAR460, complete sequence 17622-17656 11 0.686
NZ_CP020827_1 1.10|527144|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527144-527178 35 NZ_CP009368 Bacillus cereus strain FM1 plasmid unnamed, complete sequence 31860-31894 11 0.686
NZ_CP020827_1 1.10|527144|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 527144-527178 35 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 338888-338922 11 0.686
NZ_CP020827_2 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545686-545720 35 NZ_CP012103 Bacillus thuringiensis strain HS18-1 plasmid pHS18-4, complete sequence 37712-37746 11 0.686
NZ_CP020827_2 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545686-545720 35 AP022644 Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence 47741-47775 11 0.686
NZ_CP020827_2 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545686-545720 35 NZ_CP012101 Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence 203066-203100 11 0.686
NZ_CP020827_2 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545686-545720 35 NZ_CP031072 Bacillus mycoides strain BPN401 plasmid pl395, complete sequence 369457-369491 11 0.686
NZ_CP020827_2 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545686-545720 35 NZ_CP013276 Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence 346229-346263 11 0.686
NZ_CP020827_2 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545686-545720 35 NZ_CP039722 Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence 124018-124052 11 0.686
NZ_CP020827_2 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545686-545720 35 CP024686 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence 308509-308543 11 0.686
NZ_CP020827_2 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545686-545720 35 NC_018687 Bacillus thuringiensis MC28 plasmid pMC189, complete sequence 2072-2106 11 0.686
NZ_CP020827_2 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545686-545720 35 NZ_CP009349 Bacillus thuringiensis HD1002 plasmid 1, complete sequence 62669-62703 11 0.686
NZ_CP020827_2 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 545686-545720 35 NZ_CP045023 Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence 346275-346309 11 0.686
NZ_CP020827_2 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT 546335-546369 35 NC_048106 Synechococcus phage S-CBWM1, complete genome 44408-44442 11 0.686

1. spacer 1.4|526759|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 0, identity: 1.0

acagatcaaactccggaagggtgattgtaaatggc	CRISPR spacer
acagatcaaactccggaagggtgattgtaaatggc	Protospacer
***********************************

2. spacer 1.4|526759|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 0, identity: 1.0

acagatcaaactccggaagggtgattgtaaatggc	CRISPR spacer
acagatcaaactccggaagggtgattgtaaatggc	Protospacer
***********************************

3. spacer 1.4|526759|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

acagatcaaactccggaagggtgattgtaaatggc	CRISPR spacer
acagatcaaactccggaagggtgattgtaaatggc	Protospacer
***********************************

4. spacer 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 0, identity: 1.0

aaaataggaggaaataaattatgactatcaaattaa	CRISPR spacer
aaaataggaggaaataaattatgactatcaaattaa	Protospacer
************************************

5. spacer 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 0, identity: 1.0

aaaataggaggaaataaattatgactatcaaattaa	CRISPR spacer
aaaataggaggaaataaattatgactatcaaattaa	Protospacer
************************************

6. spacer 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

aaaataggaggaaataaattatgactatcaaattaa	CRISPR spacer
aaaataggaggaaataaattatgactatcaaattaa	Protospacer
************************************

7. spacer 1.10|527144|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgaatcaacggatatagattttacaatttc	CRISPR spacer
tttgttgaatcaacggatatagattttacaatttc	Protospacer
***********************************

8. spacer 2.9|544180|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 0, identity: 1.0

agagtttccagctgtaaggccagatattgataatttc	CRISPR spacer
agagtttccagctgtaaggccagatattgataatttc	Protospacer
*************************************

9. spacer 2.23|545103|34|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 0, identity: 1.0

atactaaaacttcgctcattttccgcaactcctt	CRISPR spacer
atactaaaacttcgctcattttccgcaactcctt	Protospacer
**********************************

10. spacer 2.23|545103|34|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 0, identity: 1.0

atactaaaacttcgctcattttccgcaactcctt	CRISPR spacer
atactaaaacttcgctcattttccgcaactcctt	Protospacer
**********************************

11. spacer 2.23|545103|34|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 0, identity: 1.0

atactaaaacttcgctcattttccgcaactcctt	CRISPR spacer
atactaaaacttcgctcattttccgcaactcctt	Protospacer
**********************************

12. spacer 2.24|545166|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011399 (Listeria monocytogenes strain CFSAN008100 plasmid pCFSAN008100, complete sequence) position: , mismatch: 0, identity: 1.0

ttaagaaatatgattgattctctggatatcacttt	CRISPR spacer
ttaagaaatatgattgattctctggatatcacttt	Protospacer
***********************************

13. spacer 2.24|545166|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

ttaagaaatatgattgattctctggatatcacttt	CRISPR spacer
ttaagaaatatgattgattctctggatatcacttt	Protospacer
***********************************

14. spacer 2.25|545230|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 0, identity: 1.0

cctccacaatcactcggctttcttcgtctttatcgac	CRISPR spacer
cctccacaatcactcggctttcttcgtctttatcgac	Protospacer
*************************************

15. spacer 2.25|545230|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 0, identity: 1.0

cctccacaatcactcggctttcttcgtctttatcgac	CRISPR spacer
cctccacaatcactcggctttcttcgtctttatcgac	Protospacer
*************************************

16. spacer 2.25|545230|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

cctccacaatcactcggctttcttcgtctttatcgac	CRISPR spacer
cctccacaatcactcggctttcttcgtctttatcgac	Protospacer
*************************************

17. spacer 2.27|545361|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 0, identity: 1.0

gtcgctagagctaaaaaatggatagaggaacaacaag	CRISPR spacer
gtcgctagagctaaaaaatggatagaggaacaacaag	Protospacer
*************************************

18. spacer 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 0, identity: 1.0

gttgaaaagcgcaccattgttttaatttttttaatt	CRISPR spacer
gttgaaaagcgcaccattgttttaatttttttaatt	Protospacer
************************************

19. spacer 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 0, identity: 1.0

gttgaaaagcgcaccattgttttaatttttttaatt	CRISPR spacer
gttgaaaagcgcaccattgttttaatttttttaatt	Protospacer
************************************

20. spacer 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

gttgaaaagcgcaccattgttttaatttttttaatt	CRISPR spacer
gttgaaaagcgcaccattgttttaatttttttaatt	Protospacer
************************************

21. spacer 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 0, identity: 1.0

ttttgtcgcataaattctttgatgtggcggactgacg	CRISPR spacer
ttttgtcgcataaattctttgatgtggcggactgacg	Protospacer
*************************************

22. spacer 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 0, identity: 1.0

ttttgtcgcataaattctttgatgtggcggactgacg	CRISPR spacer
ttttgtcgcataaattctttgatgtggcggactgacg	Protospacer
*************************************

23. spacer 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 0, identity: 1.0

ttttgtcgcataaattctttgatgtggcggactgacg	CRISPR spacer
ttttgtcgcataaattctttgatgtggcggactgacg	Protospacer
*************************************

24. spacer 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 0, identity: 1.0

ttttgtcgcataaattctttgatgtggcggactgacg	CRISPR spacer
ttttgtcgcataaattctttgatgtggcggactgacg	Protospacer
*************************************

25. spacer 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 0, identity: 1.0

ttttgtcgcataaattctttgatgtggcggactgacg	CRISPR spacer
ttttgtcgcataaattctttgatgtggcggactgacg	Protospacer
*************************************

26. spacer 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 0, identity: 1.0

ttttgtcgcataaattctttgatgtggcggactgacg	CRISPR spacer
ttttgtcgcataaattctttgatgtggcggactgacg	Protospacer
*************************************

27. spacer 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 0, identity: 1.0

ttttgtcgcataaattctttgatgtggcggactgacg	CRISPR spacer
ttttgtcgcataaattctttgatgtggcggactgacg	Protospacer
*************************************

28. spacer 2.49|546790|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 0, identity: 1.0

tcgttaatcataattgatgaaagtcatcatgtgttag	CRISPR spacer
tcgttaatcataattgatgaaagtcatcatgtgttag	Protospacer
*************************************

29. spacer 2.49|546790|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

tcgttaatcataattgatgaaagtcatcatgtgttag	CRISPR spacer
tcgttaatcataattgatgaaagtcatcatgtgttag	Protospacer
*************************************

30. spacer 1.6|526888|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 1, identity: 0.971

gcgatttttgtcaaagggacagcgatgggttacaa	CRISPR spacer
gcgatttttgtcaaaggaacagcgatgggttacaa	Protospacer
*****************.*****************

31. spacer 1.8|527015|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.971

ctaaaacatccttcactgtatcaactcctttctat	CRISPR spacer
ctaaaacatccttcactgtctcaactcctttctat	Protospacer
******************* ***************

32. spacer 1.8|527015|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.971

ctaaaacatccttcactgtatcaactcctttctat	CRISPR spacer
ctaaaacatccttcactgtctcaactcctttctat	Protospacer
******************* ***************

33. spacer 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.972

aaaataggaggaaataaattatgactatcaaattaa	CRISPR spacer
aaaataggaggaaatagattatgactatcaaattaa	Protospacer
****************.*******************

34. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 1, identity: 0.973

gtttatagtatgtaaaacaaacacaggaaaatatatc	CRISPR spacer
gtttatagtatgtaaaaccaacacaggaaaatatatc	Protospacer
****************** ******************

35. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094025 (Listeria phage LP-032 contig 2, partial genome) position: , mismatch: 1, identity: 0.973

gtttatagtatgtaaaacaaacacaggaaaatatatc	CRISPR spacer
gtttatagtatgtaaaaccaacacaggaaaatatatc	Protospacer
****************** ******************

36. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 1, identity: 0.973

gtttatagtatgtaaaacaaacacaggaaaatatatc	CRISPR spacer
gtttatagtatgtaaaaccaacacaggaaaatatatc	Protospacer
****************** ******************

37. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 1, identity: 0.973

gtttatagtatgtaaaacaaacacaggaaaatatatc	CRISPR spacer
gtttatagtatgtaaaaccaacacaggaaaatatatc	Protospacer
****************** ******************

38. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 1, identity: 0.973

gtttatagtatgtaaaacaaacacaggaaaatatatc	CRISPR spacer
gtttatagtatgtaaaaccaacacaggaaaatatatc	Protospacer
****************** ******************

39. spacer 2.17|544707|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.973

atttaagtattaatgtttttaaaaagtttgatttatt	CRISPR spacer
atttaagtattaatgtttttaaaaagtctgatttatt	Protospacer
***************************.*********

40. spacer 2.17|544707|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011399 (Listeria monocytogenes strain CFSAN008100 plasmid pCFSAN008100, complete sequence) position: , mismatch: 1, identity: 0.973

atttaagtattaatgtttttaaaaagtttgatttatt	CRISPR spacer
atttaagtattaatgtttttaaaaagtctgatttatt	Protospacer
***************************.*********

41. spacer 2.17|544707|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.973

atttaagtattaatgtttttaaaaagtttgatttatt	CRISPR spacer
atttaagtattaatgtttttaaaaagtctgatttatt	Protospacer
***************************.*********

42. spacer 2.22|545039|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 1, identity: 0.971

aaaattagcgttccaaaaataagacctgtcgcaac	CRISPR spacer
aaaattagcgttccaaaaattagacctgtcgcaac	Protospacer
******************** **************

43. spacer 2.22|545039|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 1, identity: 0.971

aaaattagcgttccaaaaataagacctgtcgcaac	CRISPR spacer
aaaattagcgttccaaaaattagacctgtcgcaac	Protospacer
******************** **************

44. spacer 2.25|545230|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 1, identity: 0.973

cctccacaatcactcggctttcttcgtctttatcgac	CRISPR spacer
cctccacaatcacacggctttcttcgtctttatcgac	Protospacer
************* ***********************

45. spacer 2.27|545361|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 1, identity: 0.973

gtcgctagagctaaaaaatggatagaggaacaacaag	CRISPR spacer
gtcgctagagctaaaaaatggattgaggaacaacaag	Protospacer
*********************** *************

46. spacer 2.27|545361|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 1, identity: 0.973

gtcgctagagctaaaaaatggatagaggaacaacaag	CRISPR spacer
gtcgctagagctaaaaaatggattgaggaacaacaag	Protospacer
*********************** *************

47. spacer 2.29|545492|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 1, identity: 0.971

acttgaaggacgtgcttcaaaatatttagttgcat	CRISPR spacer
gcttgaaggacgtgcttcaaaatatttagttgcat	Protospacer
.**********************************

48. spacer 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 1, identity: 0.971

acattttgcacgcaccaagcttgacggtctgaaac	CRISPR spacer
acattttgcacgcaccaagcttggcggtctgaaac	Protospacer
***********************.***********

49. spacer 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 1, identity: 0.971

acattttgcacgcaccaagcttgacggtctgaaac	CRISPR spacer
acattttgcacgcaccacgcttgacggtctgaaac	Protospacer
***************** *****************

50. spacer 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 1, identity: 0.971

acattttgcacgcaccaagcttgacggtctgaaac	CRISPR spacer
acattttgcacgcaccacgcttgacggtctgaaac	Protospacer
***************** *****************

51. spacer 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 1, identity: 0.971

acattttgcacgcaccaagcttgacggtctgaaac	CRISPR spacer
acattttgcacgcaccacgcttgacggtctgaaac	Protospacer
***************** *****************

52. spacer 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 1, identity: 0.971

acattttgcacgcaccaagcttgacggtctgaaac	CRISPR spacer
acattttgcacgcaccacgcttgacggtctgaaac	Protospacer
***************** *****************

53. spacer 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 1, identity: 0.971

acattttgcacgcaccaagcttgacggtctgaaac	CRISPR spacer
acattttgcacgcaccacgcttgacggtctgaaac	Protospacer
***************** *****************

54. spacer 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 1, identity: 0.971

acattttgcacgcaccaagcttgacggtctgaaac	CRISPR spacer
acattttgcacgcaccacgcttgacggtctgaaac	Protospacer
***************** *****************

55. spacer 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 1, identity: 0.971

acattttgcacgcaccaagcttgacggtctgaaac	CRISPR spacer
acattttgcacgcaccacgcttgacggtctgaaac	Protospacer
***************** *****************

56. spacer 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 1, identity: 0.971

acattttgcacgcaccaagcttgacggtctgaaac	CRISPR spacer
acattttgcacgcaccacgcttgacggtctgaaac	Protospacer
***************** *****************

57. spacer 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 1, identity: 0.971

acattttgcacgcaccaagcttgacggtctgaaac	CRISPR spacer
acattttgaacgcaccaagcttgacggtctgaaac	Protospacer
******** **************************

58. spacer 2.40|546204|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.972

ccagaaatggagtgcgcggttgattttggatttagc	CRISPR spacer
cccgaaatggagtgcgcggttgattttggatttagc	Protospacer
** *********************************

59. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 1, identity: 0.971

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
aaaccagaaccagaaaaagaagttgtgaaagaaga	Protospacer
********.**************************

60. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 1, identity: 0.971

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
aaaccagaaccagaaaaagaagttgtgaaagaaga	Protospacer
********.**************************

61. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 1, identity: 0.971

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
aaaccagaaccagaaaaagaagttgtgaaagaaga	Protospacer
********.**************************

62. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 1, identity: 0.971

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
aaaccagaaccagaaaaagaagttgtgaaagaaga	Protospacer
********.**************************

63. spacer 2.43|546399|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.973

acgtcacttgtttttgcctttgttttcgccctttcct	CRISPR spacer
acgtcacttgtttttgcctttgtttttgccctttcct	Protospacer
**************************.**********

64. spacer 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 1, identity: 0.972

gttgaaaagcgcaccattgttttaatttttttaatt	CRISPR spacer
gttgaaaagcgcaccattgttttaagttttttaatt	Protospacer
************************* **********

65. spacer 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.972

gttgaaaagcgcaccattgttttaatttttttaatt	CRISPR spacer
gttgaaaagcgcaccattgctttaatttttttaatt	Protospacer
*******************.****************

66. spacer 2.44|546465|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to AJ312240 (Bacteriophage PSA complete genome) position: , mismatch: 1, identity: 0.972

gttgaaaagcgcaccattgttttaatttttttaatt	CRISPR spacer
gttgaaaagcgcaccattgctttaatttttttaatt	Protospacer
*******************.****************

67. spacer 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 1, identity: 0.972

ttctattgcagaacagaatgaattgtatgcacaagg	CRISPR spacer
ttctattgcagaacagaatgaattatatgcacaagg	Protospacer
************************.***********

68. spacer 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094025 (Listeria phage LP-032 contig 2, partial genome) position: , mismatch: 1, identity: 0.972

ttctattgcagaacagaatgaattgtatgcacaagg	CRISPR spacer
ttctattgcagaacagaatgaattatatgcacaagg	Protospacer
************************.***********

69. spacer 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 1, identity: 0.972

ttctattgcagaacagaatgaattgtatgcacaagg	CRISPR spacer
ttctattgcagaacagaatgaattatatgcacaagg	Protospacer
************************.***********

70. spacer 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 1, identity: 0.972

ttctattgcagaacagaatgaattgtatgcacaagg	CRISPR spacer
ttctattgcagaacagaatgaattatatgcacaagg	Protospacer
************************.***********

71. spacer 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 1, identity: 0.972

ttctattgcagaacagaatgaattgtatgcacaagg	CRISPR spacer
ttctattgcagaacagaatgaattatatgcacaagg	Protospacer
************************.***********

72. spacer 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 1, identity: 0.972

ttctattgcagaacagaatgaattgtatgcacaagg	CRISPR spacer
ttctattgcagaacagaatgaattatatgcacaagg	Protospacer
************************.***********

73. spacer 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 1, identity: 0.972

ttctattgcagaacagaatgaattgtatgcacaagg	CRISPR spacer
ttctattgcagaacagaatgaattatatgcacaagg	Protospacer
************************.***********

74. spacer 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 1, identity: 0.972

ttctattgcagaacagaatgaattgtatgcacaagg	CRISPR spacer
ttctattgcagaacagaatgaattatatgcacaagg	Protospacer
************************.***********

75. spacer 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 1, identity: 0.972

ttctattgcagaacagaatgaattgtatgcacaagg	CRISPR spacer
ttctattgcagaacagaatgaattatatgcacaagg	Protospacer
************************.***********

76. spacer 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 1, identity: 0.972

ttctattgcagaacagaatgaattgtatgcacaagg	CRISPR spacer
ttctattgcagaacagaatgaattatatgcacaagg	Protospacer
************************.***********

77. spacer 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 1, identity: 0.972

ttctattgcagaacagaatgaattgtatgcacaagg	CRISPR spacer
ttctattgcagaacagaatgaattatatgcacaagg	Protospacer
************************.***********

78. spacer 2.48|546725|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 1, identity: 0.972

ttctattgcagaacagaatgaattgtatgcacaagg	CRISPR spacer
ttctattgcagaacagaatgaattatatgcacaagg	Protospacer
************************.***********

79. spacer 2.49|546790|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to AJ312240 (Bacteriophage PSA complete genome) position: , mismatch: 1, identity: 0.973

tcgttaatcataattgatgaaagtcatcatgtgttag	CRISPR spacer
tcattaatcataattgatgaaagtcatcatgtgttag	Protospacer
**.**********************************

80. spacer 1.4|526759|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.943

acagatcaaactccggaagggtgattgtaaatggc	CRISPR spacer
gcagaacaaactccggaagggtgattgtaaatggc	Protospacer
.**** *****************************

81. spacer 1.6|526888|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 2, identity: 0.943

gcgatttttgtcaaagggacagcgatgggttacaa	CRISPR spacer
gcgatttttgtcaaaggaacggcgatgggttacaa	Protospacer
*****************.**.**************

82. spacer 1.8|527015|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.943

ctaaaacatccttcactgtatcaactcctttctat	CRISPR spacer
ctaaaacatccttcactatctcaactcctttctat	Protospacer
*****************.* ***************

83. spacer 2.2|543725|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 2, identity: 0.943

tcaagctggtatgcactttttgaggtaagctattg	CRISPR spacer
tcaagttggtatgcacttttcgaggtaagctattg	Protospacer
*****.**************.**************

84. spacer 2.7|544050|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 2, identity: 0.944

tgtaactgcaaacgtctttccgcaaattcgtgtagt	CRISPR spacer
tgtaactgtaaacgtctttccacaaattcgtgtagt	Protospacer
********.************.**************

85. spacer 2.9|544180|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 2, identity: 0.946

agagtttccagctgtaaggccagatattgataatttc	CRISPR spacer
agagtttccagctgtaagaccagatattgataatttt	Protospacer
******************.*****************.

86. spacer 2.29|545492|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 2, identity: 0.943

acttgaaggacgtgcttcaaaatatttagttgcat	CRISPR spacer
gcttgaagggcgtgcttcaaaatatttagttgcat	Protospacer
.********.*************************

87. spacer 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 2, identity: 0.943

acattttgcacgcaccaagcttgacggtctgaaac	CRISPR spacer
acattttgaacgcaccaagcttgtcggtctgaaac	Protospacer
******** ************** ***********

88. spacer 2.31|545622|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 2, identity: 0.943

acattttgcacgcaccaagcttgacggtctgaaac	CRISPR spacer
acattttgaacgcaccaagcttgtcggtctgaaac	Protospacer
******** ************** ***********

89. spacer 2.34|545813|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 2, identity: 0.943

aaaaaaacaactgcgcaagaagggtatgagcaatt	CRISPR spacer
aaaaaaacaactatgcaagaagggtatgagcaatt	Protospacer
************..*********************

90. spacer 2.34|545813|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 2, identity: 0.943

aaaaaaacaactgcgcaagaagggtatgagcaatt	CRISPR spacer
aaaaaaacaactatgcaagaagggtatgagcaatt	Protospacer
************..*********************

91. spacer 2.41|546269|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 2, identity: 0.946

aagaacattagatgaacttaaagcgtctgttgaacaa	CRISPR spacer
aggaacattagatgagcttaaagcgtctgttgaacaa	Protospacer
*.*************.*********************

92. spacer 2.41|546269|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ535721 (Listeria phage List-36, complete genome) position: , mismatch: 2, identity: 0.946

aagaacattagatgaacttaaagcgtctgttgaacaa	CRISPR spacer
aggaacattagatgagcttaaagcgtctgttgaacaa	Protospacer
*.*************.*********************

93. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 2, identity: 0.943

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
aaaccggaaccagaaaaagaagttgtgaaagaaga	Protospacer
*****.**.**************************

94. spacer 2.43|546399|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 2, identity: 0.946

acgtcacttgtttttgcctttgttttcgccctttcct	CRISPR spacer
acgtcgcttgtttttgcctttgtttttgccctttcct	Protospacer
*****.********************.**********

95. spacer 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 2, identity: 0.946

ttttgtcgcataaattctttgatgtggcggactgacg	CRISPR spacer
ttttgtcgcataaattctttgatgtggcgaactggcg	Protospacer
*****************************.****.**

96. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 3, identity: 0.919

gtttatagtatgtaaaacaaacacaggaaaatatatc-	CRISPR spacer
gtttatagtatgtaaaacccacacagg-aaatatatct	Protospacer
******************  ******* ********* 

97. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 3, identity: 0.919

gtttatagtatgtaaaacaaacacaggaaaatatatc-	CRISPR spacer
gtttatagtatgtaaaacccacacagg-aaatatatct	Protospacer
******************  ******* ********* 

98. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 3, identity: 0.919

gtttatagtatgtaaaacaaacacaggaaaatatatc-	CRISPR spacer
gtttatagtatgtaaaacccacacagg-aaatatatct	Protospacer
******************  ******* ********* 

99. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 3, identity: 0.919

gtttatagtatgtaaaacaaacacaggaaaatatatc-	CRISPR spacer
gtttatagtatgtaaaacccacacagg-aaatatatct	Protospacer
******************  ******* ********* 

100. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 3, identity: 0.919

gtttatagtatgtaaaacaaacacaggaaaatatatc-	CRISPR spacer
gtttatagtatgtaaaacccacacagg-aaatatatct	Protospacer
******************  ******* ********* 

101. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 3, identity: 0.919

gtttatagtatgtaaaacaaacacaggaaaatatatc-	CRISPR spacer
gtttatagtatgtaaaacccacacagg-aaatatatct	Protospacer
******************  ******* ********* 

102. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 3, identity: 0.919

gtttatagtatgtaaaacaaacacaggaaaatatatc-	CRISPR spacer
gtttatagtatgtaaaacccacacagg-aaatatatct	Protospacer
******************  ******* ********* 

103. spacer 2.40|546204|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 3, identity: 0.917

ccagaaatggagtgcgcggttgattttggatttagc	CRISPR spacer
cccgaaatggagtgcgcggttgattttggatttaat	Protospacer
** *******************************..

104. spacer 2.40|546204|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 3, identity: 0.917

ccagaaatggagtgcgcggttgattttggatttagc	CRISPR spacer
cccgaaatggagtgcgcggttgattttggatttaat	Protospacer
** *******************************..

105. spacer 2.40|546204|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 3, identity: 0.917

ccagaaatggagtgcgcggttgattttggatttagc	CRISPR spacer
cccgaaatggagtgcgcggttgattttggatttaat	Protospacer
** *******************************..

106. spacer 2.40|546204|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 3, identity: 0.917

ccagaaatggagtgcgcggttgattttggatttagc	CRISPR spacer
cccgaaatggagtgcgcggttgattttggatttaat	Protospacer
** *******************************..

107. spacer 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 3, identity: 0.919

ttttgtcgcataaattctttgatgtggcggactgacg	CRISPR spacer
ttttgtcgcataaattctttgatgtggcgaattgatg	Protospacer
*****************************.*.***.*

108. spacer 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 3, identity: 0.919

ttttgtcgcataaattctttgatgtggcggactgacg	CRISPR spacer
ttttgtcgcataaattctttgatgtggcgaattgatg	Protospacer
*****************************.*.***.*

109. spacer 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 3, identity: 0.919

ttttgtcgcataaattctttgatgtggcggactgacg	CRISPR spacer
ttttgtcgcataaattctttgatgtggcgaattgatg	Protospacer
*****************************.*.***.*

110. spacer 2.45|546530|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 3, identity: 0.919

ttttgtcgcataaattctttgatgtggcggactgacg	CRISPR spacer
ttttgtcgcataaattctttgatgtggcgaattgatg	Protospacer
*****************************.*.***.*

111. spacer 2.47|546660|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 3, identity: 0.917

taaccaagcattgccaaaaactcgtctgttgataat	CRISPR spacer
tatccaagcattgccaaaaactcatctgttgataac	Protospacer
** ********************.***********.

112. spacer 2.47|546660|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 3, identity: 0.917

taaccaagcattgccaaaaactcgtctgttgataat	CRISPR spacer
taaccaagcattgccaaaaattcctctgttgataaa	Protospacer
********************.** *********** 

113. spacer 2.47|546660|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 3, identity: 0.917

taaccaagcattgccaaaaactcgtctgttgataat	CRISPR spacer
tatccaagcattgccaaaaactcatctgttgataac	Protospacer
** ********************.***********.

114. spacer 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 4, identity: 0.886

taaattgttaagcttgtcaacaacctgcaagaact	CRISPR spacer
cacattgttaaacttgtcaacaacctgccagaact	Protospacer
.* ********.**************** ******

115. spacer 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 4, identity: 0.886

taaattgttaagcttgtcaacaacctgcaagaact	CRISPR spacer
cacattgttaaacttgtcaacaacctgccagaact	Protospacer
.* ********.**************** ******

116. spacer 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 4, identity: 0.886

taaattgttaagcttgtcaacaacctgcaagaact	CRISPR spacer
cacattgttaaacttgtcaacaacctgccagaact	Protospacer
.* ********.**************** ******

117. spacer 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 4, identity: 0.886

taaattgttaagcttgtcaacaacctgcaagaact	CRISPR spacer
cacattgttaaacttgtcaacaacctgccagaact	Protospacer
.* ********.**************** ******

118. spacer 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 4, identity: 0.886

taaattgttaagcttgtcaacaacctgcaagaact	CRISPR spacer
cacattgttaaacttgtcaacaacctgccagaact	Protospacer
.* ********.**************** ******

119. spacer 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 4, identity: 0.886

taaattgttaagcttgtcaacaacctgcaagaact	CRISPR spacer
cacattgttaaacttgtcaacaacctgccagaact	Protospacer
.* ********.**************** ******

120. spacer 2.24|545166|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 4, identity: 0.886

ttaagaaatatgattgattctctggatatcacttt	CRISPR spacer
ttgcgaaatatgattgattctcttgatataacttt	Protospacer
**. ******************* ***** *****

121. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 4, identity: 0.886

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
aaaccagaaccagaaaaagaagttgtgaaagagcc	Protospacer
********.***********************.  

122. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 4, identity: 0.886

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
aaaccagaaccagaaaaagaagttgtgaaagagcc	Protospacer
********.***********************.  

123. spacer 2.49|546790|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 4, identity: 0.892

tcgttaatcataattgatgaaagtcatcatgtgttag	CRISPR spacer
gctttaatcattattgatgaaagtcatcatgtgctag	Protospacer
 * ******** *********************.***

124. spacer 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JN700520 (Staphylococcus phage StB12, complete genome) position: , mismatch: 5, identity: 0.861

aaaataggaggaaataaattatgact-atcaaattaa	CRISPR spacer
taaataggaggaagtaaataatgactaatcaaacta-	Protospacer
 ************.***** ****** ******.** 

125. spacer 2.13|544442|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 5, identity: 0.857

taaattgttaagcttgtcaacaacctgcaagaact	CRISPR spacer
caccttgttaaacttgtcaacaacctgccagaact	Protospacer
.*  *******.**************** ******

126. spacer 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 6, identity: 0.857

acacaaatatgaaaaaacttctattaaaagcaattccatcct	CRISPR spacer
acgataatatgaaacaacttctattaaaagcaattccaagct	Protospacer
**.  ********* ***********************  **

127. spacer 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 6, identity: 0.857

acacaaatatgaaaaaacttctattaaaagcaattccatcct	CRISPR spacer
acgataatatgaaacaacttctattaaaagcaattccaagct	Protospacer
**.  ********* ***********************  **

128. spacer 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 6, identity: 0.857

acacaaatatgaaaaaacttctattaaaagcaattccatcct	CRISPR spacer
acgataatatgaaacaacttctattaaaagcaattccaagct	Protospacer
**.  ********* ***********************  **

129. spacer 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 6, identity: 0.857

acacaaatatgaaaaaacttctattaaaagcaattccatcct	CRISPR spacer
acgataatatgaaacaacttctattaaaagcaattccaagct	Protospacer
**.  ********* ***********************  **

130. spacer 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 6, identity: 0.857

acacaaatatgaaaaaacttctattaaaagcaattccatcct	CRISPR spacer
acgataatatgaaacaacttctattaaaagcaattccaagct	Protospacer
**.  ********* ***********************  **

131. spacer 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT matches to MN694189 (Marine virus AFVG_250M578, complete genome) position: , mismatch: 6, identity: 0.829

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
taataaaaaatgagggcttagaaaatgaaaaaatt	Protospacer
*  *.*** ******.***************** *

132. spacer 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 7, identity: 0.833

acacaaatatgaaaaaacttctattaaaagcaattccatcct	CRISPR spacer
acgataatatgaaacaacttctattaaaagctattccaagct	Protospacer
**.  ********* **************** ******  **

133. spacer 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 7, identity: 0.833

acacaaatatgaaaaaacttctattaaaagcaattccatcct	CRISPR spacer
acgataatatgaaacaacttctattaaaagctattccaagct	Protospacer
**.  ********* **************** ******  **

134. spacer 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 7, identity: 0.833

acacaaatatgaaaaaacttctattaaaagcaattccatcct	CRISPR spacer
acgataatatgaaacaacttctattaaaagctattccaagct	Protospacer
**.  ********* **************** ******  **

135. spacer 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 7, identity: 0.833

acacaaatatgaaaaaacttctattaaaagcaattccatcct	CRISPR spacer
acgataatatgaaacaacttctattaaaagctattccaagct	Protospacer
**.  ********* **************** ******  **

136. spacer 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 7, identity: 0.833

acacaaatatgaaaaaacttctattaaaagcaattccatcct	CRISPR spacer
acgataatatgaaacaacttctattaaaagctattccaagct	Protospacer
**.  ********* **************** ******  **

137. spacer 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 7, identity: 0.833

acacaaatatgaaaaaacttctattaaaagcaattccatcct	CRISPR spacer
acgataatatgaaacaacttctattaaaagctattccaagct	Protospacer
**.  ********* **************** ******  **

138. spacer 1.1|526558|42|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 7, identity: 0.833

acacaaatatgaaaaaacttctattaaaagcaattccatcct	CRISPR spacer
acgataatatgaaacaacttctattaaaagctattccaagct	Protospacer
**.  ********* **************** ******  **

139. spacer 2.8|544115|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 7, identity: 0.806

ttatccattccgtcatatccccacgcatctgttcca	CRISPR spacer
ttatccattccatcatatccccaagcattgttgcct	Protospacer
***********.*********** ****.  * ** 

140. spacer 2.8|544115|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 7, identity: 0.806

ttatccattccgtcatatccccacgcatctgttcca	CRISPR spacer
ttatccattccatcatatccccaagcattgttgcct	Protospacer
***********.*********** ****.  * ** 

141. spacer 1.9|527079|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MW084976 (Bacillus phage Kirov, complete genome) position: , mismatch: 8, identity: 0.778

aaaataggaggaaataaattatgactatcaaattaa	CRISPR spacer
ttaataggaggaaataaataatggctatcgtaagaa	Protospacer
  ***************** ***.*****. *  **

142. spacer 2.22|545039|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MN693074 (Marine virus AFVG_25M380, complete genome) position: , mismatch: 8, identity: 0.771

aaaattagcgttccaaaaataagacctgtcgcaac	CRISPR spacer
gaaattagcgttccaaaaataagaccatgggaagt	Protospacer
.*************************    * *..

143. spacer 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 8, identity: 0.771

tttatctttatctatttctccag-taatagagcacg	CRISPR spacer
aatatctttatctatttctccagttatttgtgctt-	Protospacer
  ********************* ** * * ** . 

144. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to AP014248 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S34-C282, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.743

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
gaaccagaacccgaaaaagaagttgttattactga	Protospacer
.*******.** ************** *  .  **

145. spacer 2.51|546921|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043831 (Bacillus sp. BS98 plasmid unnamed1) position: , mismatch: 9, identity: 0.743

tttatcactcctatgcttttcttatttctgtaaat	CRISPR spacer
tttatcactcctatgctttttatatactcctaata	Protospacer
********************. *** ... ***  

146. spacer 2.52|546985|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 9, identity: 0.743

gcttttttcaacaattttatcaccagatgtcatta	CRISPR spacer
agttttttcaacaattttatgaacagataattttt	Protospacer
. ****************** * *****. . ** 

147. spacer 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT matches to MK448625 (Streptococcus satellite phage Javan738, complete genome) position: , mismatch: 9, identity: 0.743

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
gtatgaactatgaggacttagaaagtgaagacctg	Protospacer
 * **** ****************.****.*    

148. spacer 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT matches to MK448449 (Streptococcus satellite phage Javan356, complete genome) position: , mismatch: 9, identity: 0.743

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
gtatgaactatgaggacttagaaagtgaagacctg	Protospacer
 * **** ****************.****.*    

149. spacer 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT matches to MK448636 (Streptococcus satellite phage Javan749, complete genome) position: , mismatch: 9, identity: 0.743

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
gtctgaactatgaggacttagaaagtgaagacctg	Protospacer
 *.**** ****************.****.*    

150. spacer 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT matches to NZ_CP045037 (Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.743

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
ttaagaaatataaggacttagtaaatgaagttatg	Protospacer
**  *******.********* *******.  *  

151. spacer 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT matches to NZ_CP018177 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence) position: , mismatch: 9, identity: 0.743

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
ttaagaaatataaggacttagtaaatgaagttatg	Protospacer
**  *******.********* *******.  *  

152. spacer 2.58|547373|35|NZ_CP020827|CRISPRCasFinder,CRT matches to NZ_CP018181 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence) position: , mismatch: 9, identity: 0.743

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
ttaagaaatataaggacttagtaaatgaagttatg	Protospacer
**  *******.********* *******.  *  

153. spacer 1.3|526694|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016330 (Leuconostoc garlicum strain KFRI01 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.722

gtagtttgcgaacgtttaaaaacataatttgaaaac	CRISPR spacer
ctgaaaaacgaacgtttaaaaatataagttgaaaat	Protospacer
 *..   .**************.**** *******.

154. spacer 1.3|526694|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_016821 (Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE03, complete sequence) position: , mismatch: 10, identity: 0.722

gtagtttgcgaacgtttaaaaacataatttgaaaac	CRISPR spacer
ctgaaaaacgaacgtttaaaaatataagttgaaaat	Protospacer
 *..   .**************.**** *******.

155. spacer 1.3|526694|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014603 (Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK3, complete sequence) position: , mismatch: 10, identity: 0.722

gtagtttgcgaacgtttaaaaacataatttgaaaac	CRISPR spacer
ctgaaaaacgaacgtttaaaaatataagttgaaaat	Protospacer
 *..   .**************.**** *******.

156. spacer 1.3|526694|36|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014603 (Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK3, complete sequence) position: , mismatch: 10, identity: 0.722

gtagtttgcgaacgtttaaaaacataatttgaaaac	CRISPR spacer
ctgaaaaacgaacgtttaaaaatataagttgaaaat	Protospacer
 *..   .**************.**** *******.

157. spacer 2.12|544376|37|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to MK368614 (Vibrio phage 2 TSL-2019, complete genome) position: , mismatch: 10, identity: 0.73

gtttatagtatgtaaaacaaacacaggaaaatatatc	CRISPR spacer
ggacttagtatgtaaaacaaacaaaggaagatactaa	Protospacer
*  . ****************** *****.***.   

158. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046510 (Erwinia sp. J780 plasmid pla1, complete sequence) position: , mismatch: 10, identity: 0.714

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
gatgatgagccagaaaatgaagttgtgaaagttcc	Protospacer
.*    *********** *************    

159. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045356 (Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence) position: , mismatch: 10, identity: 0.714

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
gtagagcagccagaaaaagaagttgagaaagagac	Protospacer
. *  . ****************** ******.. 

160. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046163 (Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence) position: , mismatch: 10, identity: 0.714

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
gtagagcagccagaaaaagaagttgagaaagagac	Protospacer
. *  . ****************** ******.. 

161. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046066 (Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence) position: , mismatch: 10, identity: 0.714

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
gtagagcagccagaaaaagaagttgagaaagagac	Protospacer
. *  . ****************** ******.. 

162. spacer 1.10|527144|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 11, identity: 0.686

tttgttgaatcaacggatatagattttacaatttc	CRISPR spacer
agaaaaaaatcaaccgatatagattttaaaatctt	Protospacer
   .  .******* ************* ***.*.

163. spacer 1.10|527144|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 11, identity: 0.686

tttgttgaatcaacggatatagattttacaatttc	CRISPR spacer
aagaaaaaatcaaccgatatagattttaaaatctt	Protospacer
   .  .******* ************* ***.*.

164. spacer 1.10|527144|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

tttgttgaatcaacggatatagattttacaatttc	CRISPR spacer
agaaaaaaatcaaccgatatagattttaaaatctt	Protospacer
   .  .******* ************* ***.*.

165. spacer 1.10|527144|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.686

tttgttgaatcaacggatatagattttacaatttc	CRISPR spacer
agaaaaaaatcaaccgatatagattttaaaatctt	Protospacer
   .  .******* ************* ***.*.

166. spacer 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012103 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-4, complete sequence) position: , mismatch: 11, identity: 0.686

tttatctttatctatttctccagtaatagagcacg	CRISPR spacer
aaaatctttatctattttttcagtaatatctatct	Protospacer
   **************.*.********     * 

167. spacer 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to AP022644 (Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence) position: , mismatch: 11, identity: 0.686

tttatctttatctatttctccagtaatagagcacg	CRISPR spacer
aaaatctttatctattttttcagtaatatctatct	Protospacer
   **************.*.********     * 

168. spacer 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 11, identity: 0.686

tttatctttatctatttctccagtaatagagcacg	CRISPR spacer
aaaatctttatctattttttcagtaatatctatct	Protospacer
   **************.*.********     * 

169. spacer 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031072 (Bacillus mycoides strain BPN401 plasmid pl395, complete sequence) position: , mismatch: 11, identity: 0.686

tttatctttatctatttctccagtaatagagcacg	CRISPR spacer
aaaatctttatctattttttcagtaatatctatct	Protospacer
   **************.*.********     * 

170. spacer 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013276 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence) position: , mismatch: 11, identity: 0.686

tttatctttatctatttctccagtaatagagcacg	CRISPR spacer
aaaatctttatctattttttcagtaatatctatct	Protospacer
   **************.*.********     * 

171. spacer 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039722 (Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.686

tttatctttatctatttctccagtaatagagcacg	CRISPR spacer
aaaatctttatctattttttcagtaatatctatct	Protospacer
   **************.*.********     * 

172. spacer 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to CP024686 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence) position: , mismatch: 11, identity: 0.686

tttatctttatctatttctccagtaatagagcacg	CRISPR spacer
aaaatctttatctattttttcagtaatatctatct	Protospacer
   **************.*.********     * 

173. spacer 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_018687 (Bacillus thuringiensis MC28 plasmid pMC189, complete sequence) position: , mismatch: 11, identity: 0.686

tttatctttatctatttctccagtaatagagcacg	CRISPR spacer
aaaatctttatctattttttcagtaatatctatct	Protospacer
   **************.*.********     * 

174. spacer 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009349 (Bacillus thuringiensis HD1002 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.686

tttatctttatctatttctccagtaatagagcacg	CRISPR spacer
aaaatctttatctattttttcagtaatatctatct	Protospacer
   **************.*.********     * 

175. spacer 2.32|545686|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045023 (Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.686

tttatctttatctatttctccagtaatagagcacg	CRISPR spacer
aaaatctttatctattttttcagtaatatctatct	Protospacer
   **************.*.********     * 

176. spacer 2.42|546335|35|NZ_CP020827|PILER-CR,CRISPRCasFinder,CRT matches to NC_048106 (Synechococcus phage S-CBWM1, complete genome) position: , mismatch: 11, identity: 0.686

aaaccagagccagaaaaagaagttgtgaaagaaga	CRISPR spacer
ctaccagaggcagagaaagaagttgtgaggatgat	Protospacer
  ******* ****.*************... .. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 125821 : 132346 9 Listeria_phage(33.33%) tail NA
DBSCAN-SWA_2 1126420 : 1135378 9 Hokovirus(28.57%) NA NA
DBSCAN-SWA_3 1246898 : 1327988 104 Listeria_phage(80.0%) tail,terminase,portal,tRNA,capsid,holin,integrase,protease attL 1246782:1246803|attR 1291696:1291717
DBSCAN-SWA_4 1862926 : 1871212 8 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 2386313 : 2426698 63 Listeria_phage(94.12%) tail,holin,terminase NA
DBSCAN-SWA_6 2568809 : 2576653 7 Streptococcus_phage(50.0%) NA NA
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP020827.1|WP_003723550.1|1300545_1300740_-|hypothetical-protein 1300545_1300740_- 64 aa aa NA WHTH_GntR NA 1246898-1327988 yes
NZ_CP020827.1|WP_003723553.1|1301986_1302124_-|hypothetical-protein 1301986_1302124_- 45 aa aa NA WHTH_GntR NA 1246898-1327988 yes