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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP018869 Sporosarcina sp. P37 plasmid pSporoP37, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP015349 Sporosarcina sp. P37 chromosome, complete genome 1 crisprs RT,DEDDh,csa3,cas3,PrimPol,DinG 0 1 4 0

Results visualization

1. NZ_CP015349
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015349_1 2342175-2342266 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP015349_1 1.1|2342207|28|NZ_CP015349|CRISPRCasFinder 2342207-2342234 28 NZ_CP026547 Cupriavidus metallidurans strain Ni-2 plasmid unnamed3 26525-26552 5 0.821
NZ_CP015349_1 1.1|2342207|28|NZ_CP015349|CRISPRCasFinder 2342207-2342234 28 NZ_CP029602 Streptomyces sp. WAC 01438 plasmid unnamed1, complete sequence 43682-43709 6 0.786
NZ_CP015349_1 1.1|2342207|28|NZ_CP015349|CRISPRCasFinder 2342207-2342234 28 NZ_CP009155 Burkholderia pseudomallei strain TSV202 plasmid 1, complete sequence 93271-93298 6 0.786
NZ_CP015349_1 1.1|2342207|28|NZ_CP015349|CRISPRCasFinder 2342207-2342234 28 NZ_CP015038 Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence 147918-147945 6 0.786

1. spacer 1.1|2342207|28|NZ_CP015349|CRISPRCasFinder matches to NZ_CP026547 (Cupriavidus metallidurans strain Ni-2 plasmid unnamed3) position: , mismatch: 5, identity: 0.821

ccccatgcgcaagcgctcataccagcaa	CRISPR spacer
cgccatgcgcaagcgctcataccaaatg	Protospacer
* **********************.  .

2. spacer 1.1|2342207|28|NZ_CP015349|CRISPRCasFinder matches to NZ_CP029602 (Streptomyces sp. WAC 01438 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

ccccatgcgcaagcgctcataccagcaa	CRISPR spacer
ccccatgcgcaagcgcacctaccacttc	Protospacer
**************** * ***** .  

3. spacer 1.1|2342207|28|NZ_CP015349|CRISPRCasFinder matches to NZ_CP009155 (Burkholderia pseudomallei strain TSV202 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.786

ccccatgcgcaagcgctcataccagcaa	CRISPR spacer
caccatgcgcaagcgctcgtacgagatc	Protospacer
* ****************.*** **   

4. spacer 1.1|2342207|28|NZ_CP015349|CRISPRCasFinder matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 6, identity: 0.786

ccccatgcgcaagcgctcataccagcaa	CRISPR spacer
caccatacgcaagcgctcatacgagatc	Protospacer
* ****.*************** **   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 28941 : 78672 77 Bacillus_phage(18.42%) terminase,plate,integrase,portal,capsid,holin,tail attL 25849:25863|attR 53887:53901
DBSCAN-SWA_2 306531 : 383266 96 Bacillus_phage(37.21%) tRNA,terminase,protease,holin,capsid,portal,tail NA
DBSCAN-SWA_3 2683934 : 2743747 53 Streptococcus_phage(23.08%) tRNA,integrase,transposase attL 2716358:2716379|attR 2747808:2747829
DBSCAN-SWA_4 3116386 : 3204057 108 Vibrio_phage(16.67%) tRNA,terminase,plate,integrase,protease,portal,capsid,holin,tail,transposase attL 3118753:3118771|attR 3210005:3210023
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage