CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018380	Burkholderia pseudomallei strain 2008724734 chromosome 1, complete sequence	0 crisprs	DinG,csa3,DEDDh,cas3,WYL	0	0	14	0
NZ_CP018381	Burkholderia pseudomallei strain 2008724734 chromosome 2, complete sequence	2 crisprs	csa3,DinG,RT,cas3	0	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

10273 : 65769

Pseudomonas_phage(25.0%)

capsid,terminase,tRNA,plate,head,tail,portal

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004193488.1\|10273_10678_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_004526515.1\|11106_12318_-	EAL domain-containing protein	NA	NA	NA	NA
WP_009965224.1\|12353_12623_-	hypothetical protein	NA	NA	NA	NA
WP_004534949.1\|13360_14293_-	DMT family transporter	NA	NA	NA	NA
WP_004191983.1\|14552_14777_-	lipoprotein	NA	NA	NA	NA
WP_004193128.1\|15028_15241_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_004521865.1\|15464_17396_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_004526521.1\|18053_18359_+	pentapeptide MXKDX repeat protein	NA	NA	NA	NA
WP_004195184.1\|18519_19344_+	DUF1223 domain-containing protein	NA	NA	NA	NA
WP_085504262.1\|19385_20483_+	cytochrome b/b6 domain-containing protein	NA	NA	NA	NA
WP_004526525.1\|20498_21290_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_076802140.1\|21517_21727_-	hypothetical protein	NA	NA	NA	NA
WP_004192284.1\|21743_22679_+	EamA family transporter	NA	NA	NA	NA
WP_004193486.1\|23030_24227_-	MFS transporter	NA	NA	NA	NA
WP_004201361.1\|24234_24387_+	hypothetical protein	NA	NA	NA	NA
WP_004200135.1\|24505_25294_+	hypothetical protein	NA	NA	NA	NA
WP_009965267.1\|25461_25872_+	hypothetical protein	NA	NA	NA	NA
WP_009970370.1\|25843_26134_-	hypothetical protein	NA	NA	NA	NA
WP_004542968.1\|26227_27055_-	phosphodiesterase	NA	NA	NA	NA
WP_004538444.1\|27277_28306_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.5e-21	31.2
WP_020850830.1\|28481_29387_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_009965292.1\|30019_30532_-	hypothetical protein	NA	NA	NA	NA
WP_004191802.1\|30595_31420_-	ABC transporter permease	NA	NA	NA	NA
WP_004193494.1\|31528_32590_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_009965295.1\|32646_33672_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_085503757.1\|34133_34742_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_085503758.1\|35001_35205_-	hypothetical protein	NA	NA	NA	NA
WP_085503759.1\|35208_35748_-	hypothetical protein	NA	NA	NA	NA
WP_157130421.1\|35799_36450_-	glycoside hydrolase family 19 protein	B5M9U5	Pseudomonas_phage	1.2e-31	43.3
WP_085503761.1\|36494_37139_-	HNH endonuclease	A0A096XUV0	Cronobacter_phage	8.5e-19	45.1
WP_085503762.1\|37231_37561_-	hypothetical protein	NA	NA	NA	NA
WP_157130281.1\|37849_40153_-	hypothetical protein	Q8HAL3	Burkholderia_phage	5.6e-12	33.0
WP_085503763.1\|40136_40934_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_085504263.1\|41131_41842_-\|tail	phage tail protein	A9YX14	Burkholderia_phage	3.1e-70	64.9
WP_085503765.1\|42123_42771_-	DUF2313 domain-containing protein	NA	NA	NA	NA
WP_085503766.1\|42779_43901_-\|plate	baseplate J/gp47 family protein	A0A0M3LQN4	Mannheimia_phage	4.5e-15	27.8
WP_085503767.1\|43900_44347_-	hypothetical protein	A0A2P9JZK5	Alteromonadaceae_phage	2.8e-21	38.1
WP_085503768.1\|44343_44943_-\|plate	phage baseplate assembly protein	Q8HAB9	Salmonella_phage	2.7e-19	37.3
WP_085503769.1\|44939_46031_-	Mu P family protein	M1PVV2	Vibrio_phage	1.2e-33	30.4
WP_085503770.1\|46054_46450_+	hypothetical protein	NA	NA	NA	NA
WP_085503771.1\|46452_47910_-	DNA circulation family protein	U5P4I0	Shigella_phage	5.1e-19	22.9
WP_085503772.1\|47906_49757_-\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_085503773.1\|49875_50160_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_085504264.1\|50161_50530_-\|tail	phage tail protein	NA	NA	NA	NA
WP_085503774.1\|50581_52063_-\|tail	phage tail protein	B5TK67	Pseudomonas_phage	1.6e-100	44.3
WP_085503775.1\|52059_52236_-	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_085503776.1\|52246_52891_-	ABC transporter permease	NA	NA	NA	NA
WP_085503777.1\|52887_53217_-	hypothetical protein	NA	NA	NA	NA
WP_157130282.1\|53223_53505_-	hypothetical protein	NA	NA	NA	NA
WP_085503778.1\|53504_54566_-\|capsid	major capsid protein	V5Q8G6	Xylella_phage	2.9e-48	33.3
WP_157130284.1\|54650_55661_-	hypothetical protein	NA	NA	NA	NA
WP_085503781.1\|56386_57268_-	S49 family peptidase	A0A1I9KF73	Aeromonas_phage	9.8e-50	39.9
WP_085504265.1\|57264_58830_-\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	5.5e-88	34.8
WP_085504266.1\|58898_59126_-\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
WP_085503782.1\|59170_61261_-\|terminase	terminase	A0A2K9V3X4	Faecalibacterium_phage	1.0e-97	35.8
WP_157130286.1\|61232_61850_-	hypothetical protein	K4ICN8	Acidithiobacillus_phage	3.6e-06	26.7
WP_157130288.1\|61902_62688_-	hypothetical protein	A0A0H5BBW8	Pseudomonas_phage	1.4e-15	40.3
WP_085503785.1\|62791_63106_-	hypothetical protein	A0A0S4L5D5	Pseudomonas_phage	9.9e-13	44.8
WP_085503786.1\|63098_63293_-	hypothetical protein	NA	NA	NA	NA
WP_085503787.1\|63303_64002_-	hypothetical protein	NA	NA	NA	NA
WP_085503788.1\|64095_64314_-	hypothetical protein	NA	NA	NA	NA
WP_157130290.1\|64279_64552_-	hypothetical protein	A0A2R2YAX9	Pseudomonas_phage	8.8e-10	62.0
WP_157130292.1\|64548_65769_-	hypothetical protein	A0A291LA70	Bordetella_phage	8.2e-156	63.9

DBSCAN-SWA_2

69261 : 75372

Burkholderia_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085503793.1\|69261_69699_-	hypothetical protein	Q6V7S4	Burkholderia_virus	2.8e-29	52.1
WP_157130308.1\|69695_70043_-	hypothetical protein	NA	NA	NA	NA
WP_157130310.1\|70032_70527_-	hypothetical protein	I6NMK4	Burkholderia_virus	1.2e-15	32.7
WP_085504267.1\|70523_70847_-	hypothetical protein	A0A0P0IYD2	Acinetobacter_phage	3.6e-18	53.0
WP_085503796.1\|70846_71029_-	hypothetical protein	NA	NA	NA	NA
WP_157130312.1\|71025_71208_-	hypothetical protein	NA	NA	NA	NA
WP_157130314.1\|71204_71489_-	hypothetical protein	NA	NA	NA	NA
WP_085503797.1\|71485_71698_-	hypothetical protein	NA	NA	NA	NA
WP_157130315.1\|71700_72183_-	hypothetical protein	A0A2D2W3E4	Mycobacterium_phage	2.2e-35	57.4
WP_085503799.1\|72179_72491_-	DUF4406 domain-containing protein	A0A2K8I958	Pseudomonas_phage	1.1e-19	45.0
WP_157130317.1\|72487_73081_-	hypothetical protein	Q3HR01	Burkholderia_phage	9.3e-12	32.4
WP_085503800.1\|73080_73572_-	hypothetical protein	NA	NA	NA	NA
WP_085503801.1\|73582_73867_-	hypothetical protein	NA	NA	NA	NA
WP_085503802.1\|73863_74553_-	HNH endonuclease	NA	NA	NA	NA
WP_085503803.1\|74554_75043_-	HNH endonuclease	A9J705	Pseudomonas_phage	1.9e-18	38.0
WP_085503804.1\|75021_75372_-	DUF1064 domain-containing protein	T1SA23	Salmonella_phage	7.8e-35	66.7

DBSCAN-SWA_3

82385 : 101348

Burkholderia_virus(27.78%)

integrase

attL 95847:95861|attR 102491:102505

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085503810.1\|82385_82526_+	hypothetical protein	Q8W6Q2	Burkholderia_virus	7.5e-05	60.9
WP_157130328.1\|82566_82800_+	hypothetical protein	NA	NA	NA	NA
WP_085503812.1\|82827_83022_+	hypothetical protein	NA	NA	NA	NA
WP_085503813.1\|84535_84796_+	hypothetical protein	I6NVM7	Burkholderia_virus	2.2e-18	56.5
WP_085503814.1\|84844_85135_+	hypothetical protein	NA	NA	NA	NA
WP_157130330.1\|85138_85453_+	hypothetical protein	R9TNI1	Aeromonas_phage	1.8e-06	41.1
WP_085503815.1\|85792_86047_+	hypothetical protein	NA	NA	NA	NA
WP_085503816.1\|86532_86757_+	hypothetical protein	NA	NA	NA	NA
WP_085503817.1\|86766_87036_+	hypothetical protein	F8WPQ1	Bacillus_phage	1.8e-18	53.4
WP_085503818.1\|87035_87239_+	hypothetical protein	NA	NA	NA	NA
WP_157130331.1\|87235_87553_+	DUF2528 family protein	Q6QIE6	Burkholderia_phage	3.7e-07	30.9
WP_157130333.1\|87549_87708_+	hypothetical protein	NA	NA	NA	NA
WP_157129860.1\|87704_88031_+	hypothetical protein	NA	NA	NA	NA
WP_157130335.1\|88027_88213_+	hypothetical protein	NA	NA	NA	NA
WP_085503820.1\|88222_89422_+	hypothetical protein	A0A2D0W9Q9	Bordetella_phage	1.5e-85	43.3
WP_085503821.1\|89554_90481_+	AAA family ATPase	A0A1B1P9H8	Acinetobacter_phage	3.9e-57	56.7
WP_085503822.1\|90488_91268_+	hypothetical protein	X2CYL5	Brucella_phage	5.5e-28	34.0
WP_085503823.1\|91307_91715_+	hypothetical protein	A0A2K9V403	Faecalibacterium_phage	1.5e-24	44.6
WP_085503812.1\|92086_92281_+	hypothetical protein	NA	NA	NA	NA
WP_085503825.1\|92331_93501_+	hypothetical protein	A0A077K9W7	Edwardsiella_phage	6.3e-12	39.5
WP_085504270.1\|93524_93770_+	hypothetical protein	Q6V7Q4	Burkholderia_virus	7.4e-16	76.7
WP_085503826.1\|94191_94824_+	hypothetical protein	D5LH17	Escherichia_phage	1.2e-46	49.1
WP_085503827.1\|94835_95771_+	hypothetical protein	A1YZU8	Burkholderia_virus	2.3e-17	58.5
WP_085503828.1\|95772_96717_+	hypothetical protein	NA	NA	NA	NA
95847:95861	attL	NA	NA	NA	NA
WP_085504272.1\|96808_97315_+	hypothetical protein	NA	NA	NA	NA
WP_085503829.1\|97307_97694_+	hypothetical protein	A9YWU7	Burkholderia_phage	3.4e-07	38.0
WP_085503830.1\|97686_97956_+	hypothetical protein	NA	NA	NA	NA
WP_157130337.1\|98165_98303_+	hypothetical protein	NA	NA	NA	NA
WP_157130339.1\|98295_98580_+	hypothetical protein	NA	NA	NA	NA
WP_085503831.1\|98576_99047_+	hypothetical protein	Q6JIG5	Burkholderia_virus	1.8e-63	76.9
WP_157130341.1\|99043_99406_+	hypothetical protein	NA	NA	NA	NA
WP_157129623.1\|99402_99558_+	hypothetical protein	NA	NA	NA	NA
WP_157130344.1\|99554_99749_+	hypothetical protein	A9YWV0	Burkholderia_phage	2.3e-20	84.0
WP_085503832.1\|99745_100081_+	hypothetical protein	A9YWU9	Burkholderia_phage	1.4e-25	80.0
WP_085503833.1\|100077_100326_+	hypothetical protein	NA	NA	NA	NA
WP_085503834.1\|100310_101348_-\|integrase	site-specific integrase	Q19US1	Mannheimia_phage	1.1e-65	42.7
102491:102505	attR	NA	NA	NA	NA

DBSCAN-SWA_4

201193 : 227265

Stx2-converting_phage(21.43%)

capsid,integrase,plate,transposase

attL 215145:215160|attR 232945:232960

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085503849.1\|201193_202099_-\|capsid	phage capsid protein	NA	NA	NA	NA
WP_085503850.1\|202151_202379_-	hypothetical protein	NA	NA	NA	NA
WP_085503851.1\|202404_203400_-	endonuclease	A6XMH8	Bacillus_virus	1.1e-54	39.8
WP_085503852.1\|203475_203676_-	hypothetical protein	NA	NA	NA	NA
WP_085503853.1\|203672_204641_-	DUF932 domain-containing protein	A0A0H4INH5	Stenotrophomonas_phage	7.4e-59	42.9
WP_085503854.1\|204762_204984_-	hypothetical protein	NA	NA	NA	NA
WP_085503855.1\|205770_208302_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.1e-32	30.6
WP_085503856.1\|208306_209326_+	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_157130351.1\|209389_212209_+	hypothetical protein	NA	NA	NA	NA
WP_085504275.1\|212211_212949_+	hypothetical protein	NA	NA	NA	NA
WP_071810515.1\|213799_214075_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_085503858.1\|214142_215954_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
215145:215160	attL	NA	NA	NA	NA
WP_085962187.1\|216178_217412_+\|transposase	IS3-like element ISButh1 family transposase	A0A1B0Z042	Pseudomonas_phage	3.1e-102	65.2
WP_157130352.1\|217510_217756_-	hypothetical protein	NA	NA	NA	NA
WP_157130353.1\|218329_218932_+	hypothetical protein	A0A1V0SKX7	Klosneuvirus	7.0e-15	33.9
WP_048984163.1\|219612_220020_+\|transposase	transposase	B6DZU5	Stx2-converting_phage	2.1e-15	37.2
WP_049006466.1\|220016_220364_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.3e-41	73.8
WP_048992636.1\|220393_221956_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.7e-150	54.3
WP_080003473.1\|221963_222593_+	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.4e-27	38.1
WP_071810706.1\|224064_224493_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5NNJ1	Burkholderia_phage	4.6e-21	47.4
WP_009941993.1\|224443_224650_+	hypothetical protein	Q8W6S4	Burkholderia_virus	3.7e-16	86.7
WP_004521809.1\|224670_225384_-	hypothetical protein	A4PE26	Ralstonia_virus	1.5e-32	43.3
WP_011204999.1\|225392_225899_-	hypothetical protein	NA	NA	NA	NA
WP_004531127.1\|225870_226344_-	hypothetical protein	NA	NA	NA	NA
WP_004552921.1\|226336_226846_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	3.0e-19	40.1
WP_004534827.1\|226842_227265_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	4.9e-15	48.3
232945:232960	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1115436 : 1119917

Burkholderia_virus(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004527234.1\|1115436_1115670_+	hypothetical protein	A4PE26	Ralstonia_virus	4.3e-13	60.6
WP_004531416.1\|1115705_1115933_-	hypothetical protein	Q8W6S4	Burkholderia_virus	3.8e-22	75.8
WP_004557051.1\|1116186_1116582_+	hypothetical protein	NA	NA	NA	NA
WP_028200808.1\|1116862_1117285_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	9.2e-14	48.3
WP_028200809.1\|1117281_1117788_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	1.0e-19	40.9
WP_071810609.1\|1118129_1118732_+	hypothetical protein	NA	NA	NA	NA
WP_076804729.1\|1119152_1119464_+	hypothetical protein	A4PE26	Ralstonia_virus	4.5e-26	60.2
WP_076833215.1\|1119484_1119670_-	hypothetical protein	Q8W6S4	Burkholderia_virus	4.4e-21	85.2
WP_004196630.1\|1119653_1119917_-	hypothetical protein	Q8W6S4	Burkholderia_virus	2.2e-26	85.5

DBSCAN-SWA_6

1341279 : 1352551

Burkholderia_virus(44.44%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085503997.1\|1341279_1341705_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	4.9e-15	49.4
WP_085503998.1\|1341701_1342211_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	3.0e-19	40.1
WP_085503999.1\|1342203_1342677_+	hypothetical protein	NA	NA	NA	NA
WP_085504000.1\|1342633_1343152_+	hypothetical protein	NA	NA	NA	NA
WP_085504295.1\|1343583_1343892_+	hypothetical protein	A4PE26	Ralstonia_virus	5.0e-25	62.1
WP_085504001.1\|1343927_1344716_-	DNA adenine methylase	Q8W6S4	Burkholderia_virus	1.0e-154	98.9
WP_085504002.1\|1344859_1345405_-	lysozyme	Q8W6S5	Burkholderia_virus	1.6e-74	88.4
WP_085504003.1\|1345404_1345902_-	lysozyme	A4JX20	Burkholderia_virus	2.2e-67	80.0
WP_004533694.1\|1345894_1346089_-	hypothetical protein	NA	NA	NA	NA
WP_085504004.1\|1346902_1347142_+	AlpA family phage regulatory protein	C7BGF0	Burkholderia_phage	1.7e-17	58.1
WP_004525642.1\|1347774_1348995_+\|transposase	ISL3-like element ISBma1 family transposase	A9YX10	Burkholderia_phage	2.7e-239	99.8
WP_101633367.1\|1349878_1352551_+	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	9.3e-27	24.3

DBSCAN-SWA_7

1673123 : 1681937

Tanapox_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004535490.1\|1673123_1673966_+	alpha/beta hydrolase	A7XCB7	Tanapox_virus	1.4e-16	26.6
WP_004522362.1\|1674304_1675228_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	2.4e-43	36.2
WP_151273282.1\|1675355_1676678_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_004550116.1\|1676904_1677807_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	3.3e-53	39.9
WP_004189725.1\|1678141_1678459_-	competence protein ComE	NA	NA	NA	NA
WP_004537712.1\|1678530_1679523_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	9.1e-28	30.9
WP_009921652.1\|1679581_1680505_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.3e-15	27.1
WP_085504045.1\|1680536_1681937_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	2.1e-78	38.3

DBSCAN-SWA_8

2018785 : 2028043

unidentified_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_028201128.1\|2018785_2020333_+	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	4.3e-24	31.2
WP_004194373.1\|2020369_2020897_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_004532195.1\|2020893_2021577_+	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	2.0e-05	26.0
WP_004194137.1\|2021641_2022457_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	8.8e-37	33.3
WP_028201129.1\|2022641_2024660_-	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VT78	Pandoravirus	7.0e-51	34.2
WP_004522147.1\|2024693_2025824_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.7e-22	27.6
WP_004533561.1\|2026090_2028043_-	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	2.7e-148	49.2

DBSCAN-SWA_9

2310124 : 2366847

Pseudomonas_phage(28.57%)

integrase,tRNA,protease,plate

attL 2314345:2314362|attR 2368854:2368871

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004521984.1\|2310124_2311423_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_004527811.1\|2311489_2312572_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	6.7e-08	46.6
WP_004534980.1\|2312615_2313473_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_004186955.1\|2313552_2313861_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_004521981.1\|2313875_2314472_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
2314345:2314362	attL	NA	NA	NA	NA
WP_004521980.1\|2314755_2315544_+	dioxygenase	NA	NA	NA	NA
WP_004527813.1\|2316005_2317607_-	APC family permease	NA	NA	NA	NA
WP_004196837.1\|2318039_2318243_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.3e-21	73.1
WP_009980969.1\|2318429_2319692_-	Hsp70 family protein	NA	NA	NA	NA
WP_004198059.1\|2320400_2321006_-	nitroreductase family protein	NA	NA	NA	NA
WP_004198060.1\|2320967_2321543_+	hypothetical protein	NA	NA	NA	NA
WP_004198061.1\|2321502_2322786_-	MFS transporter	NA	NA	NA	NA
WP_038725086.1\|2322944_2323589_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011204168.1\|2323579_2323930_+	hypothetical protein	NA	NA	NA	NA
WP_085504084.1\|2323926_2324550_+	DUF1415 domain-containing protein	NA	NA	NA	NA
WP_004521971.1\|2324641_2325538_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004535007.1\|2325665_2326802_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_075018965.1\|2326798_2327014_-	hypothetical protein	NA	NA	NA	NA
WP_004545603.1\|2327158_2328277_-	acyltransferase	NA	NA	NA	NA
WP_004545599.1\|2328275_2328755_+	hypothetical protein	NA	NA	NA	NA
WP_011205258.1\|2328714_2329161_-	hypothetical protein	NA	NA	NA	NA
WP_009932025.1\|2329687_2329783_-	hypothetical protein	NA	NA	NA	NA
WP_004204896.1\|2329821_2331987_+	peptidase	A0A0P0IY26	Acinetobacter_phage	1.9e-46	27.1
WP_009945507.1\|2332568_2332967_+	hypothetical protein	NA	NA	NA	NA
WP_011205259.1\|2333009_2333279_+	hypothetical protein	NA	NA	NA	NA
WP_004204906.1\|2333381_2333612_+	hypothetical protein	NA	NA	NA	NA
WP_009967185.1\|2333845_2334202_-	hypothetical protein	NA	NA	NA	NA
WP_004199991.1\|2334227_2335496_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004521963.1\|2335510_2337772_+	peptidase domain-containing ABC transporter	A0A2R8FG22	Brazilian_cedratvirus	2.3e-10	31.9
WP_011852269.1\|2337768_2339217_+	TolC family protein	NA	NA	NA	NA
WP_004521960.1\|2339426_2340395_-	hypothetical protein	NA	NA	NA	NA
WP_004527832.1\|2340406_2341372_+	M15 family metallopeptidase	NA	NA	NA	NA
WP_085504085.1\|2341657_2345551_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004200003.1\|2345547_2346537_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_085504086.1\|2346541_2347474_+	OmpA family protein	NA	NA	NA	NA
WP_004521957.1\|2347672_2348794_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_009967199.1\|2348883_2351553_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	2.9e-89	32.0
WP_004200010.1\|2351586_2352687_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_011205262.1\|2352650_2354477_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_085504087.1\|2354568_2355081_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004527837.1\|2355108_2355612_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004521953.1\|2355684_2357175_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_009967200.1\|2357191_2357710_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004531875.1\|2357746_2358418_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004521950.1\|2358792_2359407_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_009980978.1\|2359515_2360862_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004521948.1\|2360858_2361644_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_080003363.1\|2361730_2362588_+\|integrase	tyrosine-type recombinase/integrase	C8CLF4	Xylella_phage	2.0e-84	58.9
WP_123850113.1\|2362981_2363455_+	hypothetical protein	NA	NA	NA	NA
WP_157130397.1\|2365405_2365897_-	DnaJ domain-containing protein	NA	NA	NA	NA
WP_004535032.1\|2366319_2366847_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	2.0e-21	51.0
2368854:2368871	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2469921 : 2476368

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004198356.1\|2469921_2471112_-	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	1.5e-13	27.9
WP_094188789.1\|2471966_2473087_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.2e-49	39.5
WP_080003473.1\|2473387_2474017_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.4e-27	38.1
WP_048992636.1\|2474024_2475587_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.7e-150	54.3
WP_049006466.1\|2475616_2475964_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.3e-41	73.8
WP_048984163.1\|2475960_2476368_-\|transposase	transposase	B6DZU5	Stx2-converting_phage	2.1e-15	37.2

DBSCAN-SWA_11

2593863 : 2605100

Burkholderia_phage(22.22%)

integrase

attL 2591068:2591085|attR 2607669:2607686

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2591068:2591085	attL	NA	NA	NA	NA
WP_011857935.1\|2593863_2594565_-	chitin-binding protein	A0A0K1Y848	Apis_mellifera_filamentous_virus	4.8e-07	30.4
WP_020850756.1\|2595021_2595198_-	hypothetical protein	NA	NA	NA	NA
WP_004525721.1\|2595408_2595657_-	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	4.0e-41	97.6
WP_004530408.1\|2595813_2596893_-	DUF3396 domain-containing protein	A9YX32	Burkholderia_phage	2.2e-160	99.0
WP_009932249.1\|2596892_2597345_-	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	2.3e-31	58.8
WP_009932250.1\|2597602_2598145_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	8.1e-47	55.8
WP_004530410.1\|2598398_2599316_-	hypothetical protein	A4PE40	Ralstonia_virus	4.0e-46	40.6
WP_009922658.1\|2599315_2599633_-	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	6.2e-15	57.0
WP_004525725.1\|2600012_2600756_-\|integrase	site-specific integrase	A0A0S2SYQ7	Pseudomonas_phage	9.4e-54	47.3
WP_004202928.1\|2601790_2602690_+	cytochrome c	NA	NA	NA	NA
WP_004524472.1\|2603012_2605100_-	AAA family ATPase	A7KV33	Bacillus_phage	1.9e-99	35.8
2607669:2607686	attR	NA	NA	NA	NA

DBSCAN-SWA_12

2828748 : 2937012

108

Burkholderia_phage(44.07%)

capsid,terminase,tRNA,plate,head,tail,holin,portal,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045597403.1\|2828748_2829810_+\|portal	phage portal protein	A4JWV0	Burkholderia_virus	6.8e-199	99.1
WP_004523107.1\|2829883_2830168_-	hypothetical protein	NA	NA	NA	NA
WP_004200731.1\|2830164_2830647_-	DUF2778 domain-containing protein	NA	NA	NA	NA
WP_009962344.1\|2832597_2833728_+	DNA repair exonuclease	NA	NA	NA	NA
WP_038718170.1\|2833724_2836367_+	AAA family ATPase	NA	NA	NA	NA
WP_024430097.1\|2836576_2839039_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_009979570.1\|2839042_2840500_+	type I restriction-modification system subunit M	J7I0U9	Acinetobacter_phage	1.5e-26	31.6
WP_009962363.1\|2840496_2842227_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_009962364.1\|2842398_2843613_-	DUF3396 domain-containing protein	E5E3X7	Burkholderia_phage	3.9e-142	67.4
WP_009962366.1\|2843623_2844373_-	VRR-NUC domain-containing protein	A4JWV4	Burkholderia_virus	3.6e-61	58.0
WP_085504122.1\|2846311_2847406_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_129111995.1\|2847911_2848370_-	hypothetical protein	NA	NA	NA	NA
WP_009962369.1\|2848366_2848936_-	SocA family protein	NA	NA	NA	NA
WP_004200732.1\|2849562_2849967_+	PaaI family thioesterase	NA	NA	NA	NA
WP_004189208.1\|2850004_2850874_+	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_004525849.1\|2850994_2852011_-	D-2-hydroxyacid dehydrogenase family protein	NA	NA	NA	NA
WP_004189230.1\|2852449_2853505_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_009962376.1\|2853728_2856338_-	DNA topoisomerase III	A0A2P1ELA0	Moumouvirus	7.7e-18	25.4
WP_004190199.1\|2856548_2856920_-	thioredoxin family protein	NA	NA	NA	NA
WP_004553745.1\|2856979_2858170_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	2.0e-21	39.2
WP_004525852.1\|2858398_2858902_+	peptide deformylase	A0A067XQZ3	Caulobacter_phage	2.1e-12	34.3
WP_004535363.1\|2858933_2859917_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.3e-07	38.0
WP_004525854.1\|2860037_2860673_+	LysE family translocator	NA	NA	NA	NA
WP_004189409.1\|2860782_2861640_+\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_004523097.1\|2862119_2863529_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_004188929.1\|2863525_2864116_+	DUF4390 domain-containing protein	NA	NA	NA	NA
WP_004523096.1\|2864117_2866526_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
WP_004189647.1\|2866526_2867210_+	response regulator	NA	NA	NA	NA
WP_071810932.1\|2868237_2868588_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_085504123.1\|2869279_2872072_-	hypothetical protein	K4NXL6	Burkholderia_phage	0.0e+00	94.1
WP_071810930.1\|2872083_2872338_-	hypothetical protein	A4JWQ9	Burkholderia_virus	3.0e-36	92.9
WP_085504124.1\|2872334_2872703_-	hypothetical protein	A4JWR0	Burkholderia_virus	5.3e-58	94.3
WP_010100757.1\|2872696_2872903_-	hypothetical protein	K4NZT3	Burkholderia_phage	4.2e-20	67.6
WP_085504125.1\|2873071_2873311_-	hypothetical protein	K4PAZ5	Burkholderia_phage	1.8e-35	98.7
WP_080495621.1\|2873314_2873524_-	hypothetical protein	K4NXL1	Burkholderia_phage	4.5e-30	98.6
WP_085504126.1\|2873552_2873750_-	hypothetical protein	K4NZY3	Burkholderia_phage	5.9e-24	87.7
WP_010100769.1\|2873755_2873974_-	hypothetical protein	A4JWR5	Burkholderia_virus	2.1e-30	88.9
WP_038800161.1\|2874059_2874308_-	ogr/Delta-like zinc finger family protein	K4PAZ0	Burkholderia_phage	8.3e-39	96.3
WP_010100773.1\|2874295_2874499_-	hypothetical protein	E5E3T9	Burkholderia_phage	2.1e-24	85.1
WP_010100775.1\|2874538_2874736_-	hypothetical protein	E5E3U0	Burkholderia_phage	4.1e-25	87.7
WP_010100777.1\|2874750_2874966_-	hypothetical protein	E5E3U1	Burkholderia_phage	1.8e-21	84.6
WP_107974106.1\|2875055_2875553_+	helix-turn-helix domain-containing protein	E5E3U2	Burkholderia_phage	4.2e-42	57.6
WP_085504127.1\|2875579_2876293_-	DUF159 family protein	Q8W6R8	Burkholderia_virus	8.7e-65	50.9
WP_038800163.1\|2876392_2876728_+	hypothetical protein	R4JGF4	Burkholderia_phage	1.2e-24	53.8
WP_010100780.1\|2876874_2877120_+	hypothetical protein	NA	NA	NA	NA
WP_085504128.1\|2877197_2878298_-	phage late control D family protein	K4PAY4	Burkholderia_phage	1.7e-192	94.0
WP_085504129.1\|2878297_2878723_-\|tail	phage tail protein	A4JWS2	Burkholderia_virus	2.8e-71	98.6
WP_085504315.1\|2878740_2881635_-	hypothetical protein	A4JWS3	Burkholderia_virus	1.5e-280	62.1
WP_028201171.1\|2881841_2881955_-\|tail	GpE family phage tail protein	A0A089FGX3	Burkholderia_phage	4.6e-13	94.6
WP_028201170.1\|2881963_2882308_-\|tail	phage tail assembly protein	K4NXA3	Burkholderia_phage	7.7e-51	95.5
WP_028201169.1\|2882365_2882875_-\|tail	phage major tail tube protein	K4NZR9	Burkholderia_phage	1.0e-91	95.9
WP_071810916.1\|2882890_2884063_-\|tail	phage tail sheath protein	A4JWS7	Burkholderia_virus	1.6e-217	96.7
WP_085504130.1\|2884120_2884792_-\|tail	tail assembly chaperone	A4JWS8	Burkholderia_virus	2.6e-103	93.2
WP_080495619.1\|2884808_2887181_-\|tail	phage tail protein	Q45YG3	Burkholderia_virus	0.0e+00	87.5
WP_085504131.1\|2887182_2887737_-\|tail	phage tail protein I	A4JWT0	Burkholderia_virus	6.3e-95	95.1
WP_085504132.1\|2887729_2888635_-\|plate	baseplate assembly protein	K4NZR5	Burkholderia_phage	6.1e-156	95.3
WP_085504133.1\|2888631_2888994_-\|plate	baseplate assembly protein	K4PAX6	Burkholderia_phage	8.1e-59	95.8
WP_085504134.1\|2888990_2889671_-\|plate	phage baseplate assembly protein V	K4NXJ5	Burkholderia_phage	6.7e-115	92.5
WP_085504316.1\|2889745_2890594_+	site-specific DNA-methyltransferase	A4JWY5	Burkholderia_virus	1.6e-145	90.0
WP_085504135.1\|2891098_2891569_-	phage virion morphogenesis protein	K4NZQ8	Burkholderia_phage	2.9e-69	88.4
WP_085504136.1\|2891565_2891982_-\|tail	phage tail protein	A4JWT7	Burkholderia_virus	1.7e-65	89.9
WP_085504137.1\|2892086_2892527_-	protein LYSB	K4NXJ2	Burkholderia_phage	8.0e-69	96.6
WP_085504138.1\|2892523_2893336_-	DUF3380 domain-containing protein	A4JWZ0	Burkholderia_virus	6.7e-146	96.7
WP_085504139.1\|2893332_2893605_-\|holin	phage holin family protein	K4NX91	Burkholderia_phage	2.0e-41	98.9
WP_015985026.1\|2893606_2893951_-	gp45, putative bacteriophage membrane protein	A4JWU2	Burkholderia_virus	2.9e-50	100.0
WP_010112635.1\|2893965_2894172_-\|tail	tail protein	K4PAW7	Burkholderia_phage	1.5e-30	98.5
WP_085504140.1\|2894168_2894420_-	hypothetical protein	K4NXI9	Burkholderia_phage	1.4e-33	90.2
WP_085504141.1\|2894419_2894899_-\|head	head completion/stabilization protein	A4JWU5	Burkholderia_virus	7.9e-78	96.2
WP_085504142.1\|2894998_2895688_-\|terminase	terminase endonuclease subunit	A4JWP8	Burkholderia_virus	2.6e-114	96.9
WP_085504143.1\|2895684_2896698_-\|capsid	phage major capsid protein, P2 family	K4NZP8	Burkholderia_phage	2.0e-184	97.3
WP_085504144.1\|2896731_2897541_-\|capsid	GPO family capsid scaffolding protein	K4PAW2	Burkholderia_phage	3.7e-136	91.8
WP_085504145.1\|2897684_2899454_+\|terminase	terminase ATPase subunit family protein	A4JWQ1	Burkholderia_virus	0.0e+00	97.3
WP_085504146.1\|2899450_2900557_+\|portal	phage portal protein	A4JWQ2	Burkholderia_virus	1.1e-202	98.0
WP_085504147.1\|2900591_2901077_+	hypothetical protein	NA	NA	NA	NA
WP_010100815.1\|2901788_2902460_-	hypothetical protein	NA	NA	NA	NA
WP_010100816.1\|2902440_2903355_-	DNA-processing protein DprA	S6BFL3	Thermus_phage	4.4e-37	41.9
WP_009918037.1\|2904093_2904384_+	hypothetical protein	NA	NA	NA	NA
WP_004190026.1\|2904380_2905115_+	7-cyano-7-deazaguanine synthase QueC	A0A1B0Z0B4	Vibrio_phage	1.6e-50	42.5
WP_038729300.1\|2905208_2905841_+	7-carboxy-7-deazaguanine synthase	R4TAH8	Halovirus	8.1e-06	30.2
WP_004189793.1\|2905860_2906313_+	6-carboxytetrahydropterin synthase QueD	A0A088FAL2	Vibrio_phage	7.6e-14	30.8
WP_076847668.1\|2906409_2906742_-	hypothetical protein	NA	NA	NA	NA
WP_004523095.1\|2906734_2907520_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
WP_004545693.1\|2907516_2908293_+	sel1 repeat family protein	NA	NA	NA	NA
WP_085504148.1\|2908934_2910083_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_004525858.1\|2910094_2912506_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_004523092.1\|2912689_2913202_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_004189331.1\|2913198_2914272_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_004189550.1\|2914391_2915435_-	rod shape-determining protein	NA	NA	NA	NA
WP_004189769.1\|2915800_2916100_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_009962426.1\|2916212_2917703_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_004523090.1\|2917705_2919178_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_004189747.1\|2919304_2920144_+	hypothetical protein	NA	NA	NA	NA
WP_004190029.1\|2920176_2920947_+	exodeoxyribonuclease III	R4TWA8	Phaeocystis_globosa_virus	3.4e-30	33.8
WP_011205251.1\|2921103_2922567_+\|transposase	IS1182-like element ISBma2 family transposase	A0A1X9I5T2	Streptococcus_phage	4.0e-80	38.8
WP_004534096.1\|2922834_2923899_-	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.3e-80	45.8
WP_004531039.1\|2924110_2925055_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_038800902.1\|2925428_2926385_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_004523086.1\|2926470_2927784_-	AmpG family muropeptide MFS transporter	NA	NA	NA	NA
WP_004545692.1\|2927795_2928410_-	methionine biosynthesis protein MetW	NA	NA	NA	NA
WP_004545672.1\|2928406_2929552_-	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_004525865.1\|2929900_2930593_-	nucleoid occlusion factor SlmA	NA	NA	NA	NA
WP_004198307.1\|2930559_2931363_-	pyrimidine 5'-nucleotidase	NA	NA	NA	NA
WP_004200214.1\|2931359_2932259_-	acetylglutamate kinase	NA	NA	NA	NA
WP_004198312.1\|2932583_2932835_+	cysteine-rich CWC family protein	NA	NA	NA	NA
WP_085503378.1\|2932852_2934133_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_004198315.1\|2934153_2934696_+	response regulator transcription factor	NA	NA	NA	NA
WP_004198316.1\|2935122_2936466_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	3.7e-40	28.8
WP_004203414.1\|2936475_2937012_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA

DBSCAN-SWA_13

3708211 : 3719158

Streptococcus_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004197486.1\|3708211_3710326_-	elongation factor G	E4ZFJ7	Streptococcus_phage	5.8e-56	26.7
WP_004530837.1\|3710623_3711133_-	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.5e-13	41.2
WP_071810810.1\|3711324_3711543_-	hypothetical protein	NA	NA	NA	NA
WP_085503329.1\|3711804_3712383_-	pseudouridine synthase	NA	NA	NA	NA
WP_004189552.1\|3712650_3713910_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.2e-12	63.0
WP_009929279.1\|3713882_3714065_-	hypothetical protein	NA	NA	NA	NA
WP_085504213.1\|3714077_3715682_+	multicopper oxidase family protein	NA	NA	NA	NA
WP_004196460.1\|3715811_3716015_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_004194131.1\|3716546_3716861_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	4.4e-13	44.6
WP_004196461.1\|3716857_3719158_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.1e-167	42.1

DBSCAN-SWA_14

3882534 : 3927129

uncultured_Caudovirales_phage(35.48%)

capsid,terminase,plate,head,tail,portal,integrase,protease

attL 3885297:3885315|attR 3919239:3919257

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004522511.1\|3882534_3883074_+\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_009969854.1\|3883171_3884308_-	murein-DD-endopeptidase	NA	NA	NA	NA
WP_004200110.1\|3884556_3884781_-	hypothetical protein	NA	NA	NA	NA
WP_009969855.1\|3884797_3885139_-	hypothetical protein	NA	NA	NA	NA
WP_004526357.1\|3885237_3885714_+	hypothetical protein	NA	NA	NA	NA
3885297:3885315	attL	NA	NA	NA	NA
WP_157130414.1\|3887506_3887908_+	hypothetical protein	NA	NA	NA	NA
WP_085504237.1\|3887896_3888523_-\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	8.8e-37	44.8
WP_009964475.1\|3888977_3890078_+\|integrase	site-specific integrase	A0A2D1GMX8	Marinobacter_phage	1.5e-44	31.0
WP_009964477.1\|3890111_3890342_-	hypothetical protein	NA	NA	NA	NA
WP_038720986.1\|3890338_3891118_-	hypothetical protein	Q6J1P0	Burkholderia_virus	6.5e-21	57.3
WP_025405240.1\|3891126_3891456_-	hypothetical protein	NA	NA	NA	NA
WP_009964483.1\|3891569_3892886_-	hypothetical protein	NA	NA	NA	NA
WP_009964485.1\|3892885_3893335_-	hypothetical protein	NA	NA	NA	NA
WP_004534172.1\|3893331_3893937_-	hypothetical protein	NA	NA	NA	NA
WP_004534202.1\|3893933_3894269_-	hypothetical protein	NA	NA	NA	NA
WP_004550209.1\|3894320_3894539_-	hypothetical protein	NA	NA	NA	NA
WP_123850154.1\|3894667_3895123_-	hypothetical protein	NA	NA	NA	NA
WP_009909040.1\|3895070_3895556_-	helix-turn-helix transcriptional regulator	A0A193GYL7	Enterobacter_phage	4.4e-12	41.2
WP_076853252.1\|3895704_3895932_+	hypothetical protein	NA	NA	NA	NA
WP_009927752.1\|3896020_3896548_+	hypothetical protein	C7BGG0	Burkholderia_phage	9.7e-29	46.5
WP_025405238.1\|3896561_3896894_+	hypothetical protein	NA	NA	NA	NA
WP_009964493.1\|3896901_3897357_-	hypothetical protein	NA	NA	NA	NA
WP_099975963.1\|3897358_3897817_+	hypothetical protein	NA	NA	NA	NA
WP_071810769.1\|3897880_3898060_+	hypothetical protein	NA	NA	NA	NA
WP_009964497.1\|3898190_3898661_+	hypothetical protein	NA	NA	NA	NA
WP_085504238.1\|3898782_3901275_+	virulence protein E	A0A2D1GN57	Marinobacter_phage	8.5e-99	41.8
WP_025405237.1\|3901492_3902266_+	hypothetical protein	NA	NA	NA	NA
WP_025405236.1\|3902485_3902674_+	hypothetical protein	NA	NA	NA	NA
WP_009964504.1\|3902767_3903337_+	hypothetical protein	NA	NA	NA	NA
WP_009964506.1\|3903299_3905288_+\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	6.6e-179	53.3
WP_009964508.1\|3905298_3905505_+	hypothetical protein	NA	NA	NA	NA
WP_038720977.1\|3905501_3906995_+\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	4.1e-133	50.8
WP_071810768.1\|3906991_3908068_+\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	3.1e-50	38.1
WP_038720978.1\|3908094_3908439_+\|head	head decoration protein	NA	NA	NA	NA
WP_009964517.1\|3908504_3909500_+\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	2.8e-109	59.1
WP_009964519.1\|3909503_3909794_+	hypothetical protein	NA	NA	NA	NA
WP_009964520.1\|3909795_3910326_+\|tail	phage tail protein	A0A2H4JBV1	uncultured_Caudovirales_phage	4.1e-11	29.0
WP_004533675.1\|3910315_3910849_+	hypothetical protein	Q9JML9	Wolbachia_phage	6.2e-23	39.5
WP_038720980.1\|3910851_3911532_+\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	9.0e-19	35.1
WP_009964525.1\|3911596_3911803_+	hypothetical protein	NA	NA	NA	NA
WP_004547840.1\|3911799_3912144_+	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.4e-23	50.9
WP_009964528.1\|3912140_3913034_+\|plate	baseplate J protein	A0A1J0I2M3	Salmonella_phage	8.4e-49	40.1
WP_004539949.1\|3913026_3913602_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.0e-32	47.7
WP_004539647.1\|3913589_3915053_+	hypothetical protein	A4JWL8	Burkholderia_virus	8.0e-214	77.8
WP_009964532.1\|3915068_3915521_+\|tail	tail assembly chaperone	A4JWL9	Burkholderia_virus	4.8e-45	77.7
WP_009964534.1\|3915587_3916757_+\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	3.7e-161	73.5
WP_085504239.1\|3916767_3917271_+\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	4.7e-41	47.9
WP_085504240.1\|3917340_3917643_+\|tail	phage tail assembly protein	V5YST8	Pseudomonas_phage	1.5e-05	37.2
WP_085504241.1\|3917730_3920145_+\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	3.3e-63	32.9
3919239:3919257	attR	NA	NA	NA	NA
WP_009964541.1\|3920153_3921035_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	2.0e-31	38.1
WP_009964543.1\|3921009_3921216_+\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.4e-15	59.7
WP_009964545.1\|3921225_3922278_+	phage late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	5.4e-79	44.8
WP_009964547.1\|3922353_3922548_+	hypothetical protein	NA	NA	NA	NA
WP_038720983.1\|3922540_3923038_+	lysozyme	A4JX20	Burkholderia_virus	2.0e-68	80.0
WP_009964551.1\|3923037_3923583_+	lysozyme	Q8W6S5	Burkholderia_virus	7.3e-80	92.8
WP_009964553.1\|3923725_3924514_+	DNA adenine methylase	Q8W6S4	Burkholderia_virus	3.6e-152	96.9
WP_076853254.1\|3924549_3924888_-	hypothetical protein	A4PE26	Ralstonia_virus	1.1e-25	58.0
WP_099975964.1\|3925253_3925688_-	hypothetical protein	NA	NA	NA	NA
WP_038720984.1\|3925731_3926205_-	hypothetical protein	NA	NA	NA	NA
WP_085504242.1\|3926197_3926707_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	2.3e-19	40.9
WP_009964559.1\|3926706_3927129_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	1.1e-14	46.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018381

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018381_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018381_1

2017483-2017607

Orphan

Consensus_repeat	Method
CGAGGCGGAACGCCGGGCGCGCCGCCGCGCACGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018381_1

>merge|NZ_CP018381|1|2017483-2017607|CRISPRCasFinder
CGAGGCGGAACGCCGGGCGCGCCGCCGCGCACGGCGCGTCGGGCGAAGCGGTTCGGATAGGGTTGCGAACGGGCCGAGCGCTTCGATCGCGAGGCGGAACGCCGGCGCGCGCCGCCGCGCACGGC

>NZ_CP018381|1|1|2017483-2017607|CRISPRCasFinder
CGAGGCGGAACGCCGGGCGCGCCGCCGCGCACGGC	GCGTCGGGCGAAGCGGTTCGGATAGGGTTGCGAACGGGCCGAGCGCTTCGATCGC
GAGGCGGAACGCCGGCGCGCGCCGCCGCGCACGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018381.1\|WP_004523344.1\|2025636_2026140_+\|DUF421-domain-containing-protein	unknown	unknown	gnl\|CDD\|225205
NZ_CP018381.1\|WP_011205749.1\|2012795_2013152_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018381.1\|WP_004523340.1\|2020948_2022424_+\|RNA-polymerase-factor-sigma-54	unknown	unknown	gnl\|CDD\|237109
NZ_CP018381.1\|WP_004529441.1\|2010708_2011008_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018381.1\|WP_009927309.1\|2013875_2014733_+\|MipA/OmpV-family-protein	unknown	unknown	gnl\|CDD\|377682
NZ_CP018381.1\|WP_004523342.1\|2022724_2022886_+\|DUF1328-domain-containing-protein	unknown	unknown	gnl\|CDD\|227774
NZ_CP018381.1\|WP_004552250.1\|2017803_2018313_+\|ferritin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377580
NZ_CP018381.1\|WP_085504599.1\|2018570_2019467_-\|manganese-catalase-family-protein	unknown	unknown	gnl\|CDD\|226076
NZ_CP018381.1\|WP_004541992.1\|2019525_2020284_-\|DUF4397-domain-containing-protein	unknown	unknown	gnl\|CDD\|379570
NZ_CP018381.1\|WP_004529428.1\|2022920_2023352_+\|DUF3022-domain-containing-protein	unknown	unknown	gnl\|CDD\|378603
NZ_CP018381.1\|WP_004523334.1\|2012226_2012496_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018381.1\|WP_004552252.1\|2016781_2017339_+\|DUF3005-domain-containing-protein	unknown	unknown	gnl\|CDD\|378664
NZ_CP018381.1\|WP_004529429.1\|2022491_2022680_+\|DUF3008-family-protein	unknown	unknown	gnl\|CDD\|314387
NZ_CP018381.1\|WP_085504600.1\|2023487_2025614_+\|catalase-HPII	unknown	unknown	gnl\|CDD\|236886
NZ_CP018381.1\|WP_004557962.1\|2009853_2010033_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018381.1\|WP_004529443.1\|2010167_2010416_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018381.1\|WP_004553960.1\|2015411_2015762_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018381.1\|WP_004523336.1\|2013188_2013485_+\|lipoprotein	unknown	unknown	unknown
NZ_CP018381.1\|WP_004542031.1\|2016211_2016556_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018381.1\|WP_004536971.1\|2026221_2027328_+\|Ku-protein	unknown	unknown	gnl\|CDD\|274290

Protein	Function_ID	Function_description	E-value
NZ_CP018381.1\|WP_004523344.1\|2025636_2026140_+\|DUF421-domain-containing-protein	gnl\|CDD\|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	3.63901e-31
NZ_CP018381.1\|WP_004523340.1\|2020948_2022424_+\|RNA-polymerase-factor-sigma-54	gnl\|CDD\|237109	PRK12469, PRK12469, RNA polymerase factor sigma-54; Provisional.	0
NZ_CP018381.1\|WP_004529429.1\|2022491_2022680_+\|DUF3008-family-protein	gnl\|CDD\|314387	pfam11450, DUF3008, Protein of unknwon function (DUF3008). This is a bacterial family of uncharacterized proteins.	1.17203e-13
NZ_CP018381.1\|WP_009927309.1\|2013875_2014733_+\|MipA/OmpV-family-protein	gnl\|CDD\|377682	pfam06629, MipA, MltA-interacting protein MipA. This family consists of several bacterial MltA-interacting protein (MipA) like sequences. As well as interacting with the membrane-bound lytic transglycosylase MltA, MipA is known to bind to PBP1B, a bifunctional murein transglycosylase/transpeptidase. MipA is considered to be a structural protein mediating the assembly of MltA to PBP1B into a complex.	6.36239e-51
NZ_CP018381.1\|WP_004552250.1\|2017803_2018313_+\|ferritin-like-domain-containing-protein	gnl\|CDD\|377580	pfam05974, DUF892, Domain of unknown function (DUF892). This family consists of several hypothetical bacterial proteins of unknown function.	2.44459e-48
NZ_CP018381.1\|WP_004541992.1\|2019525_2020284_-\|DUF4397-domain-containing-protein	gnl\|CDD\|379570	pfam14344, DUF4397, Domain of unknown function (DUF4397). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 120 amino acids in length.	3.42152e-26
NZ_CP018381.1\|WP_004529428.1\|2022920_2023352_+\|DUF3022-domain-containing-protein	gnl\|CDD\|378603	pfam11226, DUF3022, Protein of unknown function (DUF3022). This family of proteins with unknown function appears to be restricted to Proteobacteria.	1.51165e-32
NZ_CP018381.1\|WP_085504599.1\|2018570_2019467_-\|manganese-catalase-family-protein	gnl\|CDD\|226076	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism].	2.00343e-108
NZ_CP018381.1\|WP_004523342.1\|2022724_2022886_+\|DUF1328-domain-containing-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	0.00075118
NZ_CP018381.1\|WP_004552252.1\|2016781_2017339_+\|DUF3005-domain-containing-protein	gnl\|CDD\|378664	pfam11448, DUF3005, Protein of unknown function (DUF3005). This is a bacterial family of uncharacterized proteins.	1.05611e-52
NZ_CP018381.1\|WP_085504600.1\|2023487_2025614_+\|catalase-HPII	gnl\|CDD\|236886	PRK11249, katE, hydroperoxidase II; Provisional.	0
NZ_CP018381.1\|WP_004536971.1\|2026221_2027328_+\|Ku-protein	gnl\|CDD\|274290	TIGR02772, conserved_hypothetical_protein, Ku protein, prokaryotic. Members of this protein family are Ku proteins of non-homologous end joining (NHEJ) DNA repair in bacteria and in at least one member of the archaea (Archaeoglobus fulgidus). Most members are encoded by a gene adjacent to the gene for the DNA ligase that completes the repair. The NHEJ system is broadly but rather sparsely distributed, being present in about one fifth of the first 250 completed prokarytotic genomes. A few species (e.g. Archaeoglobus fulgidus and Bradyrhizobium japonicum) have multiple copies that appear to represent recent paralogous family expansion. [DNA metabolism, DNA replication, recombination, and repair].	3.66196e-123

>NZ_CP018381.1|WP_004552252.1|2016781_2017339_+|DUF3005-domain-containing-protein
MQNAESNPTPQKQREIAAKSPVKTPAAGRDMPDAATQEQETRAHERKLTAEAIAGKTPTGLPPIDVDQYASGDGDPVRRAASRIVTLDNANMAATDNTVDVDGKGLEARTGASEWHDNVIYSNASLDEAVDTPDDSLAGIESRPHGYRPEVEPSEGWRVVYLGTVDIEHTLGARTEHKFSFERST
>NZ_CP018381.1|WP_004542031.1|2016211_2016556_+|hypothetical-protein
MKKYLAIMAAVAIVLGGCATKNYGRMGNLTDYERNTMDCREINLEIARVDGFLSHVDEESEFDGRSVLSFLGDFGIGNVLEKDAAKKSARDRRQALDALRAAKQCGYATTGAPL
>NZ_CP018381.1|WP_004553960.1|2015411_2015762_-|hypothetical-protein
MHIKSAATFVSLVLFLHGCTSIDIDQLASHQHDQDENRCRNYGYQIGTNKFADCMMLLDQERRSAAIAEDENDERLKSLSIMRNNDERFPVCVPTMPNVKLDVPNHSWYGPNCRER
>NZ_CP018381.1|WP_009927309.1|2013875_2014733_+|MipA/OmpV-family-protein
MRDAAARRRTARRIVCAACAAAAVSAHAQTPSPLGEWQYSAGVPLDKLFNPNPQTWQISVGAAATLQPRYDGSNQYRPMAGPTFDARYRDLWFVSTGEGIGVNVLRGPNWRATLSAGYDLGRREADDRGHLTGIGNINPAAVIKLSADYVISHAFPLVLRADVRRSVGGANGWVADLAAYMPLPGSSETFYWFAGPTVTFADSRYMNSWFGVNDAQAARSGHPRYAPSAGVKSFGGGMTLVWFVTKHWFVTADGAIEQLVGSAARSPLTQRSTNAVVDVSINYQF
>NZ_CP018381.1|WP_004523336.1|2013188_2013485_+|lipoprotein
MTIRRISTKLAGVAAMALTAACSQNGPYGGSPRAGSTGGTITDGVNQPPAAVTPSDGARYGSPGYHGAQPMAPGGDVGDGNGAGTGSMPAPGAPGSSD
>NZ_CP018381.1|WP_011205749.1|2012795_2013152_+|hypothetical-protein
MAGAARDAPPPLEKAMTIRIEPGDKREIAETLGRYFEARSIPFHIEEHPADVLHIGFHADGHPAAVTVTFDEDAFAAFAQWDIEQKRLALRRLADEFAEMMAQRSPTAHAGDLHINRF
>NZ_CP018381.1|WP_004523334.1|2012226_2012496_+|hypothetical-protein
MHPDVLFHRPYPPIPDPEYVPPDPDEDDDNPVDPPEPYRHPEGDPPPPEPPVHARLAPRGRRGGRLTAAACVCRRTLAHLRGDGRVHCE
>NZ_CP018381.1|WP_004529441.1|2010708_2011008_+|hypothetical-protein
METPKSTVHYESNVCGGSFESVLDRFGNWKREPLVYRPERRMFEGKDSVRRLGDEAFDSPDKARRALIRSCAPRDRFALAAPICDDDHQMWLVMAAFEA
>NZ_CP018381.1|WP_004529443.1|2010167_2010416_-|hypothetical-protein
MTQHSQRQPTPRAPNSPPMKDKDEIRTHRSEDRIDKALEDTFPASDPPATGGVTRVDPSKPTRGDRPHGPAHDTHRRDDAKH
>NZ_CP018381.1|WP_004557962.1|2009853_2010033_-|hypothetical-protein
MSGGECIAAGSSFKEHQMSRTKRMWREVEGAVEVTALAAIECALLVAILVALGFPHAGI
>NZ_CP018381.1|WP_004552250.1|2017803_2018313_+|ferritin-like-domain-containing-protein
MTTPQEHLEDWLRDAYAMERHAETMLKAQAARLDNYPVLRDRIQQHVEETLEQQRLLESCLQRLDTSPSAIKDLAARAAAYGQAASGLFVADEVVKGAMAGYVFEHVEIASYKTLIAAAQLAGENEIRDCCERILKQEVDMAEWMSQHLPDIAVAFLERSAAERRDAKR
>NZ_CP018381.1|WP_085504599.1|2018570_2019467_-|manganese-catalase-family-protein
MFFHNKRLQYTVRVAETNPGLANLLLEQFGGPQGELAAAMRYFTQAIAEEDAGRKDMLYDIATEELSHLEIIGSIVAMLNRGAKGELAEAVDEQAQLYRKLNGGGNDSHVTQLLYGAGAPLINSGAVPWTAAYVDTIGEPTADLRSNIAAEARAKIIYERLINVTDDPGIRDALGFLMTREVSHQKSFEKALYSITPNFPPGKLPAVPEYADLYYAMSDGGGARRKSPWNDGHDLRLVEHPPVPADGGDGKATVALDGDESTTLEAMRHRLKSDPSSDPTTGADLGSGGPDKPRDFPT
>NZ_CP018381.1|WP_004541992.1|2019525_2020284_-|DUF4397-domain-containing-protein
MKPIRTVAALISAVALVAACGGDDTGTELGISNPQARFINAVPAGPSLDYYLNAQANATGIAYKGVTRYRSVGSGSQTASYDVTGTSVTIASQTFNAANGHHYTTIAIPSTSTPISVIDDPFAKGLLSDQARVRGFNASPNAQNVDIYVVPPGTNIAAQSPTLAGAAYQNAVPASGQDSIYLSGGTYQVIVTLPGSKTPILTTPPVSIANNADWLLLTIPAGGVADVVPNDIHVLVAQGNDADTSAQELGPQ
>NZ_CP018381.1|WP_004523340.1|2020948_2022424_+|RNA-polymerase-factor-sigma-54
MSATLALQMRQHLALTPRLQQSLRLLQLSSLEFQQELRQALDTNPFLEDVQSPDDDAAEAAPKPGETPAADANARADDGYAERDEGPFATDASPPAGQDVPLTAELSARGSSRRSDDASDLEPGDWMTAEPTLHEHLHDALRLCQLTRRDRTLARMIIDALDDDGYLRQALPELAAAADPLLHPAEQELLVALRLVQSLDQPGIGARTLSECLLLQLDAMPADTPGVECAKEIAAHHLERLARRETAEMQRRIGCDTHTLRIACALVRRLDPRPGNQYGSTAGNYVVPDVIVRQVRNDWLVTINPAVMPRARIHRRYAELFAQSSGSNQSPLGQQLQEARWLIRNAQKRFDTIRRVGECIVERQRDFFRYGEIALKPLVLRDIADELGLHESTISRATGNKYMSTPHGTFEFKHFFPRKLEAAGKGACSAAVARVLIRDMIAAEQAIDPLSDVALAQRLAGRGIVLARRTVTKYRQAMKIPPAELRRRAPL
>NZ_CP018381.1|WP_004529429.1|2022491_2022680_+|DUF3008-family-protein
MPAKSQAQQRAAGAALSAKRGRTKASELKRPSKSMYSSMSEKELEKLAGTKTRDKPKHKSKS
>NZ_CP018381.1|WP_004523342.1|2022724_2022886_+|DUF1328-domain-containing-protein
MLRYALIFFIIAIIAAVLGFGGIAAGAAEIAKILFYIFVVIFLVTLVLGVARR
>NZ_CP018381.1|WP_004529428.1|2022920_2023352_+|DUF3022-domain-containing-protein
MPRARRPPGAGSGRAMTLPTDLPQRLVEIEHLLSDCFASPSTTVLHVDDSSGRLTIQVSWVAARAASSLLEARCALNLVFEPNVLRRYGRLDAAARARVRERLAALARQTVDAARPVEGSEADACNATLPVTDALLDDALRGG
>NZ_CP018381.1|WP_085504600.1|2023487_2025614_+|catalase-HPII
MADSDRNAPHETPRAAQPDDARADRKSQDLEPYRSKPQGEALRTNQGVRIADDQNTLRAGARGPSLLEDFIMREKITHFDHERIPERVVHARGSAAHGVFRVYESMAEYTKAAFLQDPAKETPVYVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNYDLVGNNMPVFFIQDAIKFPDFVHAVKPEAPNEMPTGASAHDTFWDFVSLVPESAHMVAWLMSDRAIPRSFRTMEGFGVHTFRFVNAQGVARFVKLHWRPVLGSYSLLWDEAQKIAGHDPDFHRRDLWEAIERGDYPEYELGVQIIEARDQHAFGFDLLDPTKLIPEETVPVKLIGKMTLNRNPDNFFAETEQVAFHPGHLVPGIDFTDDPLLQGRLFSYTDTQLSRLGGPNFHELPINRPVCPFANLQRDAMHRQTIDVGQASYEPNSLNGGWPKETDPAGRDGGFDSYPETVEGAKVRVRSGSFADHFSQAALFYQSMSDVERRHIRDAYRFELGKVTRPEIRARVVDEILARFDAGLAAEVAEGLGLPPPPASAPAIVAQPLSPALSLLTRGKRSVRSRKVALVATPGADTRLIERVRRALTDARAVPVLVAPTLARIGELTPEATLAGMPSVMFDAVFVCGGDGDGRDLVHSSDARHFLQEAFKHLKAIAAVGSGRQLLGAAHLPEQGDGVCVGHAADLDQVVAKFFDALSEYRVWSREPLAQGVPA
>NZ_CP018381.1|WP_004523344.1|2025636_2026140_+|DUF421-domain-containing-protein
MDAVLAFFAPLFGSGAPLGAPQMAARAAAAFFIALALIRIAGRRSFGQRSPFDYVVGILLGATLSRAIVGVSPFWPTVAASLAIVLLHRALAWACVRSARLERFFVGAQRELYRNGRFDEAQMSAALITMTDIYESVRQKTGECDLSGVAAAILERNGHVSIIRRKS
>NZ_CP018381.1|WP_004536971.1|2026221_2027328_+|Ku-protein
MARMIWKGAISFGLVHVPVQLYPATRTVKPSFRLLDKRSLDPVGYRQINKRTGKAVPREDIVRGYEYEKERYVILTDEEIRAANPESTQTVDILTFVDDEAVSFLYLDTPYYLVPDRGGEKVYALLRDALKRSGKIGIALVVMRDRQHLGAVIPVGPLLALDTLRWQDELRPLAEIDAPAADAKKAGVSAREFEMAAKLIDDMSGDWSPDDYHDTFRDDILALVDRKVREGRVEEIAQEDTAPARRTADIVDLTELLKRSLGRAKGPRRAPDGGANERGDSGEGGDSGEGGGRGGGELARELERSVGGTRGGRGGGRKKAEPHAPPRKRAQAAATKRGKQAKPRDGASRASARTAAKKPAAARKRRAA

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Crispr_ID: NZ_CP018381_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018381_2

2328566-2328658

Orphan

Consensus_repeat	Method
TCGCCGCCGCGCGCGACGACGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018381_2

>merge|NZ_CP018381|2|2328566-2328658|CRISPRCasFinder
TCGCCGCCGCGCGCGACGACGCGCTGAAGGACGCGCTCGCGCAGGCCGCCGCCGAGCGCGAGCGGCTGATCGCCGCCGCGCGCGCCGACGCGC

>NZ_CP018381|2|2|2328566-2328658|CRISPRCasFinder
TCGCCGCCGCGCGCGACGACGCGC	TGAAGGACGCGCTCGCGCAGGCCGCCGCCGAGCGCGAGCGGCTGA
TCGCCGCCGCGCGCGCCGACGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018381.1\|WP_004188537.1\|2344208_2345735_-\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|182103
NZ_CP018381.1\|WP_004529178.1\|2332139_2333165_+\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257
NZ_CP018381.1\|WP_004524981.1\|2324326_2324584_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018381.1\|WP_046191694.1\|2333224_2333728_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018381.1\|WP_004188221.1\|2326149_2326605_+\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|184057
NZ_CP018381.1\|WP_071811428.1\|2329093_2331088_+\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183987
NZ_CP018381.1\|WP_004524989.1\|2333785_2334295_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018381.1\|WP_071811431.1\|2339881_2343142_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP018381.1\|WP_011204277.1\|2319337_2319508_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018381.1\|WP_057055166.1\|2324555_2326160_+\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|183615
NZ_CP018381.1\|WP_004552097.1\|2338754_2339879_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_CP018381.1\|WP_004548632.1\|2322401_2324195_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|213656
NZ_CP018381.1\|WP_004187193.1\|2328098_2328347_+\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|184067
NZ_CP018381.1\|WP_004524985.1\|2327095_2327404_+\|membrane-protein	unknown	unknown	gnl\|CDD\|274462
NZ_CP018381.1\|WP_004533337.1\|2331084_2331933_+\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|376304
NZ_CP018381.1\|WP_004529184.1\|2319812_2320991_-\|acetate/propionate-family-kinase	unknown	unknown	gnl\|CDD\|235922
NZ_CP018381.1\|WP_085503031.1\|2320987_2322418_-\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|236180
NZ_CP018381.1\|WP_009969306.1\|2343138_2344212_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP018381.1\|WP_004524990.1\|2334835_2336401_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185008
NZ_CP018381.1\|WP_004187346.1\|2327400_2328102_+\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|237383

Protein	Function_ID	Function_description	E-value
NZ_CP018381.1\|WP_004529178.1\|2332139_2333165_+\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP018381.1\|WP_004187193.1\|2328098_2328347_+\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|184067	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional.	4.45015e-37
NZ_CP018381.1\|WP_004188537.1\|2344208_2345735_-\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|182103	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein.	7.30998e-99
NZ_CP018381.1\|WP_004188221.1\|2326149_2326605_+\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|184057	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional.	4.44077e-63
NZ_CP018381.1\|WP_071811428.1\|2329093_2331088_+\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|183987	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional.	0
NZ_CP018381.1\|WP_071811431.1\|2339881_2343142_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.45304e-92
NZ_CP018381.1\|WP_057055166.1\|2324555_2326160_+\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|183615	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional.	0
NZ_CP018381.1\|WP_004552097.1\|2338754_2339879_-\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	1.904e-25
NZ_CP018381.1\|WP_004548632.1\|2322401_2324195_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|213656	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.95969e-179
NZ_CP018381.1\|WP_004524985.1\|2327095_2327404_+\|membrane-protein	gnl\|CDD\|274462	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2. Members of this protein family are uncharacterized, highly hydrophobic proteins encoded in the middle of apparent F1/F0 ATPase operons. We note, however, that this protein is both broadly and sparsely distributed. It is found in about only about two percent of microbial genomes sequenced, with the first ten examples found coming from the Euryarchaeota, Chlorobia, Betaproteobacteria, Deltaproteobacteria, and Planctomycetes. In most of these species, surrounding operon appears to represent a second F1/F0 ATPase system, and the member proteins belong to subfamilies with the same phylogenetic distribution as the current protein family.	4.12229e-10
NZ_CP018381.1\|WP_004533337.1\|2331084_2331933_+\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|376304	pfam00231, ATP-synt, ATP synthase.	4.46992e-34
NZ_CP018381.1\|WP_004529184.1\|2319812_2320991_-\|acetate/propionate-family-kinase	gnl\|CDD\|235922	PRK07058, PRK07058, acetate/propionate family kinase.	0
NZ_CP018381.1\|WP_085503031.1\|2320987_2322418_-\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	gnl\|CDD\|236180	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated.	0
NZ_CP018381.1\|WP_009969306.1\|2343138_2344212_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	2.70657e-39
NZ_CP018381.1\|WP_004524990.1\|2334835_2336401_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	2.47951e-79
NZ_CP018381.1\|WP_004187346.1\|2327400_2328102_+\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|237383	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional.	1.54059e-122

>NZ_CP018381.1|WP_004187193.1|2328098_2328347_+|F0F1-ATP-synthase-subunit-C
MNNLIEVVSIAAAALAVSFGAIGPALAEGRAVGAAMDAIARQPDASGTVSRTLFVGLAMIETMAIYCLVVALLLLFANPFVK
>NZ_CP018381.1|WP_004187346.1|2327400_2328102_+|F0F1-ATP-synthase-subunit-A
MNASPLSTVPLFSVGPVGISAPVLATWAIMAVLVALALVARRRLSVDAPSRLQSVLELFVATVDAQIADTMQTPPARYRALIGTIFVLVFCANGASLVPGVEPPTAHLETDAALALVVLAATLYYGVRARGVRGYLATFAEPTWVMIPLNVVEQLTRTFSLIVRLFGNVMSGVFVIGIVLSLAGLFVPIPLMALDLLTGTVQAYIFMVLSMVFIGAAVSGDETSAPRRGQENT
>NZ_CP018381.1|WP_004524985.1|2327095_2327404_+|membrane-protein
MIEMWETARASFDGIAAAIGLALGFVAGACHFVSLGWNSRLFVAGRAGVALALQLARVALAVAVLVVLARAGFGMLVAGSAGFFAARAIAVRRAAALTGARR
>NZ_CP018381.1|WP_004188221.1|2326149_2326605_+|F0F1-ATP-synthase-subunit-epsilon
MGAELRVTIATPARVCVDDLPIVSLRAEDASGAFGIRAGHVDFVTLLRASVVRWRTADGATHYAALDGGVLRVTRGARIEIACRDAVLGESLAELEAVVRGVRATQLDEKRRARVDETRLHAQAVRRLLTYLRPEHAKDGVHAPLKPETLE
>NZ_CP018381.1|WP_057055166.1|2324555_2326160_+|F0F1-ATP-synthase-subunit-beta
MADPQATNGTGAACAERDASDVGDVSDVGDARDEGAGRVVAVRGAVVDVAFDGGALPALNEALTIPVDGAAPILAEVHAHLSDAAVRALALGPTGGLRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPLLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGISVFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERIASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDVIALLGIDELGADDRRLVGRARRLQRFLTQPFAVTEAFTGQAGASVEIADTIAGCRAILRGDCDDWRESSLYMVGTLDDARRKEAAAREADARREAAAAASGAGPGTTSDPASGSAEPQGARHGR
>NZ_CP018381.1|WP_004524981.1|2324326_2324584_-|hypothetical-protein
MPFVACGSATVAPVWLVRRWLHHNGARRPPADLGQETGNRQTKRGIAQSETIDASASGADTVRAASIVDSNQIPQTYAWLQWPCQ
>NZ_CP018381.1|WP_004548632.1|2322401_2324195_-|alpha/beta-fold-hydrolase
MDTRHAPESGAPDAPLPAHPPASYAPESPYRIFDLAKEASVAKLTSGLSPASLQLALADWLIHLAAAPGKRAELATLALRHAALLGQYLLEAATGRTPAAPAQPSPGDRRFRAGAWQLEPYRFWHQSFLLAEQWWRAATRDVPGVSPHHEDVVAFSARQMLDTFAPANYVATNPEIAQRTALTGGANLAQGVWNYLDDVRRLITKQPPAGAEQFELGRNLATTPGRVVFRNHLIELLQYSPTTPDVYAQPVLIVPAWIMKYYILDLSAHNSLIRYLVGEGHTVFCISWRNVDASDRDLSLDDYRKLGVMDALDTIGAIVPGEKIHATGYCLGGTLLSIAAAAMANTGDDRLASVTLLAAQTDFAEPGELQLFIDDSEIHFLESMMWERGYLGAHQMAGSFQLLMSNDLIWSRVIHDYLLGERTPMIDLMAWNADSTRMPYRMHSEYLRHLFLDNDLATNRYVIDGQTVSVHNIRAPFFVVGTEHDHIAPWRSVYKIHYLSGSDVTFVLTAGGHNAGIVSEPGHAKRHYRMKMTAAAAPSISPDEWLAGATDFEGSWWPAWHAWLARHSSPQRVAPPPLGKPGAHTLGDAPGTYVFQK
>NZ_CP018381.1|WP_085503031.1|2320987_2322418_-|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase
MCSRNRECRVDREILQNRPFDSLAIGDSASLVRTASRDDIDLFAAMSGDVNPAHLDAAFAAHDLFGHVVVHGMWTGALVSAVLGTKLPGPGTIYLDQTLEFRHPVAPGDTITATVTVAEKRPEKRIVLLDTRCTNQDGHVVLRGTATVIAPDTPITWERVPGPEVAVRRHDRYETFVRDAREQPPLRTAIVHPCSPDALRAAIDARDANLIEPILIGPQAKIRAIADAAGVDLAGVPIEAVEHSHAAAARAVEMGGAGEVAALMKGSLHTDELLAAVIGPASRLRTERRISHVYAMDVPAYPKPLLITDAAINIAPTLEQKRDICQNAVDLLHVLGVERPRVAVLAAVETVNPKMPSTLDAAALTVMAARGQIAGAIVDGPLAFDNAVSAVAAMSKGIASPVAGDADVLLVPDLEAGNMLAKQLMYFAGADAAGLVLGARLPIILTSRADSLRVRIASAALAKLVAERTRAGALAS
>NZ_CP018381.1|WP_004529184.1|2319812_2320991_-|acetate/propionate-family-kinase
MSEPLLLTFNAGSSTLKIGLYSVANGEPAPLGRGKIDFNRAPLQFEYANGGEAHAVPLAAPVTDDLHAVLDEALGWIDAHLSVHELVSVGHRVVHGGDTFDGPVRIDERTLDAIAALVPLAPLHQPQSVRLIRALRHLRPHLPQVASFDTAFHRTQSDLVRRFALPRALFDAGIKRYGFHGLSYRYVAGRLRERHPSIARGKVVAAHLGSGASLCALDAGVSRDTSMGFSTLDGIPMATRCGALDAGVVLHLQKTLGRTLDDVEQMLYHRSGLLGVSGVSGDARALLADPSAGARDALELFAFRIAGETARLAATLGGLDALVFTAGIGEHQPQTRAAVCERLRWLGVELDAHANARNAETVSRDGSRVAVLVVPTDEEQVIARDAASVLHA
>NZ_CP018381.1|WP_011204277.1|2319337_2319508_+|hypothetical-protein
MLVSRAHGPKLRRRRARARRQSPAAILPRDLLQLRPLRARPLSAPADAARVATDDR
>NZ_CP018381.1|WP_071811428.1|2329093_2331088_+|F0F1-ATP-synthase-subunit-alpha
MTPTPDAPAAAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAPAACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAALGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYAQFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDARIAALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAFGGEQARGDADRDADHGANREVSPEASREVSREVSHEADRDAAADAARVAGRAPGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGDAARTAPSPQGGADANVNADANVDAEAEARHKR
>NZ_CP018381.1|WP_004533337.1|2331084_2331933_+|F0F1-ATP-synthase-subunit-gamma
MSDKLAAIEARTDTARQLQTVIGAMQGVAAARAHEAQQRLPGIRASAATVGAAIGDALSAGARSGDTAAGARAAPRARLVVVLCSEQGFVGAYNAQLIEHATRPEPSVSREYMMVGSRGAMLADAGGVPLVWRTPMAARADDVVHLANRITDALYAHLAKRGAQPVSIVHAMPGGAARLEVTERRLLPFDYARFDTAPRAQPPLVHLPPATLLAELAQAYVFVELCEAAMLAFAAENEARTRAMIAARESVERALGDLLQAYRIARQDEITADIVELAASGL
>NZ_CP018381.1|WP_004529178.1|2332139_2333165_+|alcohol-dehydrogenase-AdhP
MAQYMKAAVVHAFGEPLRIEEVPVPTPGAGQILVNVKASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGFVAAVGEGVRHVKEGDRVGVPWLYTACGHCEYCQTGWETLCHEQQNTGYSVNGSYAEYVLADPNYVGHLPSNVAFDEIAPILCAGVTVYKGIRVTDTRPGQWIAISGIGGLGHVAVQYAKAMGLHVVAVDVAPQKLELARKLGAAFVVDASKDDPAAVIQKEIGGVHGVLVTAVSRGAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESLDFAAEGLVRAHIHRDKLEHINGVFSALREGKVDGRIVLTGQ
>NZ_CP018381.1|WP_046191694.1|2333224_2333728_+|hypothetical-protein
MRGAGRASPSRARRYENVSKEPNTHREAGAPVHRYRLQVRNMNGECRTYELRLSSLDDGYTLEIDEWLNFPDMHLGDVTPVHVSRPVQFAVPAHEFYRRRRAFRTELIESVAAALRAGEVVRMRDSPDEYSGGHAGNPWVNWIRADLRANPGGRPPPVGDDMQDLIH
>NZ_CP018381.1|WP_004524989.1|2333785_2334295_-|hypothetical-protein
MRRIYFLLPDADTARAIVDELLLKRIEWRHIHVVANDRVPLENLPEASIAQSSDLLPALARGTAAGGVTGALAGLAAIAFPPAGLTIAGGAVVAFAIAGAGFGAWVGTMIGVSVPNTRLKHFEDAVDNGELLMMIDVHRDRVEEIEALVKQHHPNAHLEGTDPTIPAFP
>NZ_CP018381.1|WP_004524990.1|2334835_2336401_+|methyl-accepting-chemotaxis-protein
MPTLSFRQKLWLPLVISLIALLLVSISSAWLSYQTRMEERRNDLTNVAHVGLSIVREYAALAQRGVLTDAQARKEALERLRSVRYGSDGYFIVIDSSPRMIMHPIKPDTVGKDLRHVADADGRHHYLTFASVAQSPQGGFVDYVFAHPNAHPAKAVDKLGYVIRYAPWDWIISTGAYIDDIQAAFAKSLCLSAGVFALLAALLALSVVYTNRGIERMIGGDPRIAAHMAGVIASGDLATPFATRREDRSSLMFAISQMRDALANAVAQIRASAGYVATTAGEIADSNMDLSSHTECQATALQQAASSMQRLTERVRDTADRARAASELAGSAARITDRGGDMVVRVVAAMNDIRAESRKMVDIIGVIEGIAFQTNILALNAAVEAARAGNEGRGFAVVASEVRVLAQRSASAAKDIRALIGRAAERVGNGAELVEATGATIGEAQHAICRVTGIVQDIAAAATDQSQGLEQINAAVSQMDSVTRRNATLVEHAAIAAQSLNEQSRCLQDAVAAFRTEALGC
>NZ_CP018381.1|WP_004552097.1|2338754_2339879_-|ABC-transporter-permease
MRRLAIVYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDASPLSARIASAFFPPQFALPRMVTLAEADRGMNAGDFTFVLDIPPNFQRDVLAGRPAQIQLNVDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVDIAMHMRFNPNLDQTWFGSLMEVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSLAFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQLLSGSLTPRESMPFAVQNIMLAAPTTHFVEIGQAILYRGAGIETVWRKFLILAVIGTALFLLSLKRFRKTIGQMA
>NZ_CP018381.1|WP_071811431.1|2339881_2343142_-|ATP-binding-cassette-domain-containing-protein
MSAPSVVRFSDVSLRYGKTVALERITLEIPAGLTIGLIGPDGVGKSSLLALAAGARALQTGAVDALGGDMRSRRHRERVCRRIAYMPQGLGKNLYPTLSVEENLQFFARLFGHDADERRRRIDALTRSTGLFAFLSRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDLIARIRSERPAMSVIVATAYMDEAQRFDWLIAMDAGRVLATGAPAELLARTGCDSLEAAFIALLPEDERRGHKPVTLEPLRADAQTGTAIEARGLTMRFGDFTAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPATEGTAQLFGKTVDPKDINTRRRVGYMSQAFSLYSELTVRQNLVLHARLFGVPAAEIDARVDEMARRFGLADIYDMLPDSLPLGMRQRLSLAVAMVHKPELLILDEPTSGVDPVARDSFWQLMIDLARRDRVTIFISTHFMNEAQRCDRISLMHAGRVLASDAPAALVRARGAATLEEAFIGYLVDASAQEAQGGAGGRPGAGERAAGESLAGRGAATDGDADGAHARPAAYANGAAQHRAPDADAAGTDVAAETGARDDARTAHAAGHSAGNDVRATVGSEVGSEVGSEVGSDVGSDVASEAGPEAGLAASAESGAERAREPAADITADAGAAIDVEPGASAESATAAVAPARHAESAATSPRAGNAPAGTPFAAAPPSHAAPAEPPHRAFSAQRALSYMWREMLELRRDPVRATLALIGSLVLMCVIGIGISLDVEDLTYAVLDRDQTELSHDYALNLSGSRYFVERPPIADYAALDRRMRDGELSLAIEIPPNFARDVERGAPAQIGMWIDGAMPQRAETIRGYAIGMHTMWLADKARHRLGVTLAPRAEVVTRYRYNPDVKSLPAMIPAVMPLLLLMLPAMLTALAVVRERELGSILNLYVTPVTRTEFLIGKQVPYVVLAMLNFLLMTMLARIAFDVPVKGSFMTLLLAVLIFNVVATGIGLLASTFTRSQVAAIVMTIIGTMIPTVQFAGLLTPLSSLEGTGRLIGLVYPATYMLSISRGVFNKALSLHDLYSQFWPLAACVPVILGATILLLKKQER
>NZ_CP018381.1|WP_009969306.1|2343138_2344212_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MIQVTRKQIVAAAAVVVVALGAYYGWTLLRHQGPGDGFASGNGRIEATEIDVATKLPGRIDAILVDEGDFVKAGQPLANMQIQVLRAQYDEATAQRQRALNTAAGVQSQVAQRKSDKAAAQAMVVLRESELDAAERRLARSQTLSREGASSLQELDDDRARARSAQAAVSAAAAQVAAAQAAIEATEAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQYRVAQPGEVLPAGGKVLNLVDLSDVYMTFFLPETVVGRVALGADARIILDAAPNYVIPATVSFVSSTAQFTPKTVETANERQKLMFRVKARIDRELLQKHLKLVKTGLPGVAWVRVDPSKPWPAQLMVKVAQ
>NZ_CP018381.1|WP_004188537.1|2344208_2345735_-|efflux-transporter-outer-membrane-subunit
MTMRNDARHDERHQRRRGIARRAARHAAALALCAAVSGCLSLAPDYARKPPPVPAAYPAYPGEPGAGSRTLEQLGWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAAYLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKAAALDTFLASDASRRAVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEILLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDASIAPDLAPGLPSELLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFIPNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQTAFRDVADALAARHWLADQVRIAQETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALGGRLDEPARDGAAPRPSPEPSAKQGPLS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

998065 : 1065566

Aeromonas_phage(25.0%)

plate,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004530063.1\|998065_999016_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004523149.1\|999283_1000228_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_004530060.1\|1000699_1002403_+	thermolysin metallopeptidase	NA	NA	NA	NA
WP_085504434.1\|1002520_1003747_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_004200640.1\|1003801_1004944_-	porin	NA	NA	NA	NA
WP_004198249.1\|1005052_1005175_-	hypothetical protein	NA	NA	NA	NA
WP_004535106.1\|1005171_1006170_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004186939.1\|1006205_1007759_-\|holin	choline-sulfatase	NA	NA	NA	NA
WP_076809203.1\|1007894_1008794_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004186920.1\|1008937_1009813_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_004530057.1\|1009899_1011555_-	APC family permease	NA	NA	NA	NA
WP_004186918.1\|1011735_1012599_-	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004530056.1\|1012708_1013854_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_004523139.1\|1013874_1015143_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_004530055.1\|1015167_1015953_-	drug:proton antiporter	NA	NA	NA	NA
WP_004523138.1\|1015949_1017122_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_004186901.1\|1017126_1019052_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004523137.1\|1019054_1021118_-	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_004186987.1\|1021178_1021712_-	4-vinyl reductase	NA	NA	NA	NA
WP_004186989.1\|1021862_1022834_-	membrane dipeptidase	NA	NA	NA	NA
WP_004530801.1\|1022906_1024181_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	5.3e-105	54.1
WP_009923708.1\|1024192_1024456_-	hypothetical protein	NA	NA	NA	NA
WP_004198247.1\|1024614_1025640_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_004523135.1\|1025817_1027017_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	8.4e-12	27.2
WP_004523134.1\|1027442_1028459_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_023358579.1\|1028647_1030213_+	glycoside hydrolase 68 family protein	NA	NA	NA	NA
WP_009967873.1\|1030345_1032010_+	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	4.1e-57	31.6
WP_004545880.1\|1032539_1033793_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004528656.1\|1034309_1035893_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_038724161.1\|1035889_1036072_-	hypothetical protein	NA	NA	NA	NA
WP_004524284.1\|1036197_1037193_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_085504436.1\|1037445_1039032_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_038796383.1\|1039028_1040348_-	glycosyltransferase	NA	NA	NA	NA
WP_076893658.1\|1040355_1040484_-	hypothetical protein	NA	NA	NA	NA
WP_004524288.1\|1040558_1041458_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_009923697.1\|1041733_1041907_+	hypothetical protein	NA	NA	NA	NA
WP_004530793.1\|1042004_1042376_-	hypothetical protein	NA	NA	NA	NA
WP_004530792.1\|1042600_1043023_-	hypothetical protein	NA	NA	NA	NA
WP_004190863.1\|1043045_1043405_-	hypothetical protein	NA	NA	NA	NA
WP_085504437.1\|1043463_1046973_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004530043.1\|1046969_1048685_-	OmpA family protein	NA	NA	NA	NA
WP_004525552.1\|1048710_1050072_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004202226.1\|1050068_1050662_-	hypothetical protein	NA	NA	NA	NA
WP_004190606.1\|1050667_1051057_-	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_004530790.1\|1051099_1051816_-	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_004525550.1\|1051818_1052889_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_004547074.1\|1052888_1055105_-	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_004190563.1\|1055108_1057397_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_085504438.1\|1057562_1059854_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_085504439.1\|1059844_1062715_-	type VI secretion system ATPase TssH	A0A2I7REQ1	Vibrio_phage	2.4e-60	27.2
WP_004190851.1\|1062717_1063707_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004196180.1\|1063703_1065566_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_2

1223309 : 1310286

103

Burkholderia_virus(89.06%)

tail,portal,integrase,terminase,capsid,transposase,holin,head

attL 1245556:1245585|attR 1305665:1305694

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_119011596.1\|1223309_1223549_-\|transposase	transposase	NA	NA	NA	NA
WP_119011631.1\|1223470_1223881_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_009967729.1\|1224441_1225374_-	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA
WP_085504453.1\|1225530_1226901_-	c-type cytochrome	NA	NA	NA	NA
WP_085504454.1\|1226951_1228412_-	serine/threonine protein phosphatase	NA	NA	NA	NA
WP_124465852.1\|1229378_1229747_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_085504456.1\|1230008_1232843_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.1e-09	35.7
WP_085504457.1\|1232846_1234130_+	VRR-NUC domain-containing protein	NA	NA	NA	NA
WP_085504458.1\|1234173_1235505_+	DUF3396 domain-containing protein	NA	NA	NA	NA
WP_085504459.1\|1235512_1235800_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_157130431.1\|1236018_1237179_-	hypothetical protein	NA	NA	NA	NA
WP_157130432.1\|1237181_1238117_-	hypothetical protein	NA	NA	NA	NA
WP_146978766.1\|1238116_1239127_-	nucleoid-associated protein	NA	NA	NA	NA
WP_085504461.1\|1239271_1239967_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_157130433.1\|1240078_1240948_+	hypothetical protein	NA	NA	NA	NA
WP_085504463.1\|1241138_1242176_+	FRG domain-containing protein	NA	NA	NA	NA
WP_157130434.1\|1242201_1242444_+	hypothetical protein	NA	NA	NA	NA
WP_085504464.1\|1242570_1243104_+	hypothetical protein	NA	NA	NA	NA
WP_085504465.1\|1243158_1243992_+	CoiA-like domain protein	A0A2H4J456	uncultured_Caudovirales_phage	4.9e-35	47.8
WP_157130435.1\|1244147_1244795_+	hypothetical protein	NA	NA	NA	NA
WP_085504466.1\|1244880_1245291_-	hypothetical protein	NA	NA	NA	NA
1245556:1245585	attL	NA	NA	NA	NA
WP_157130436.1\|1245803_1246187_-	hypothetical protein	NA	NA	NA	NA
WP_157130437.1\|1246176_1246395_-	hypothetical protein	NA	NA	NA	NA
WP_085504468.1\|1246691_1247381_-	DUF159 family protein	Q8W6R8	Burkholderia_virus	1.6e-119	89.5
WP_085504469.1\|1247466_1248108_+	hypothetical protein	Q8W6R9	Burkholderia_virus	4.0e-109	90.1
WP_085504470.1\|1248242_1249334_-	DUF3396 domain-containing protein	Q8W6S0	Burkholderia_virus	2.0e-209	98.1
WP_085504471.1\|1249361_1250096_-	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	3.7e-135	98.4
WP_085504472.1\|1250092_1250653_-	PAAR domain-containing protein	A4JX23	Burkholderia_virus	2.8e-103	99.5
WP_085504759.1\|1250834_1251569_-	hypothetical protein	Q8W6S3	Burkholderia_virus	4.7e-130	99.1
WP_085504473.1\|1251821_1252610_-	DNA adenine methylase	Q8W6S4	Burkholderia_virus	3.2e-153	98.1
WP_085504474.1\|1252753_1253299_-	lysozyme	Q8W6S5	Burkholderia_virus	4.6e-74	86.7
WP_085504475.1\|1253298_1253790_-	lysozyme	Q6JIK8	Burkholderia_virus	4.3e-87	96.3
WP_085504476.1\|1253782_1253995_-\|holin	holin	Q8W6S7	Burkholderia_virus	8.6e-29	98.6
WP_085504477.1\|1254037_1254772_-	hypothetical protein	Q8W6S8	Burkholderia_virus	2.0e-141	96.3
WP_085504760.1\|1254771_1255038_-	hypothetical protein	Q8W6S9	Burkholderia_virus	9.4e-49	97.7
WP_085504478.1\|1255082_1258388_-	host specificity protein J	Q8W6T0	Burkholderia_virus	0.0e+00	93.0
WP_085504479.1\|1258384_1258969_-\|tail	tail assembly protein	Q8W6T1	Burkholderia_virus	8.6e-95	94.3
WP_085504480.1\|1258965_1259718_-	C40 family peptidase	Q6JIL4	Burkholderia_virus	2.3e-140	93.6
WP_085504481.1\|1259767_1260451_-\|tail	phage minor tail protein L	Q8W6T3	Burkholderia_virus	4.5e-127	95.2
WP_085504482.1\|1260447_1261836_-\|tail	tail fiber domain-containing protein	Q8W6T4	Burkholderia_virus	1.4e-244	89.4
WP_085504483.1\|1261844_1262183_-\|tail	phage tail protein	Q8W6T5	Burkholderia_virus	1.7e-58	95.5
WP_039339132.1\|1262179_1266244_-\|tail	phage tail tape measure protein	Q6JIL8	Burkholderia_virus	0.0e+00	90.0
WP_009901135.1\|1266257_1266536_-	DUF4035 domain-containing protein	Q8W6T7	Burkholderia_virus	2.4e-39	94.7
WP_085504484.1\|1266535_1267000_-\|tail	phage tail protein	Q6JIM0	Burkholderia_virus	1.1e-76	92.2
WP_085504485.1\|1267026_1267482_-\|tail	phage tail protein	Q8W6T9	Burkholderia_virus	2.3e-63	84.7
WP_085504486.1\|1267545_1267893_-	hypothetical protein	A4JX06	Burkholderia_virus	4.1e-52	87.0
WP_085504487.1\|1267889_1268312_-	HK97 gp10 family phage protein	Q8W6U1	Burkholderia_virus	1.5e-61	88.6
WP_085504488.1\|1268304_1268631_-\|head	phage head closure protein	Q8W6U2	Burkholderia_virus	2.7e-53	94.4
WP_085504489.1\|1268630_1269197_-	hypothetical protein	A4JX03	Burkholderia_virus	7.8e-93	91.0
WP_085504490.1\|1269203_1269389_-	hypothetical protein	Q8W6U4	Burkholderia_virus	8.9e-22	83.6
WP_085504491.1\|1269448_1270756_-\|capsid	phage major capsid protein	A4JX01	Burkholderia_virus	6.5e-199	85.5
WP_085504492.1\|1270858_1271827_-	S49 family peptidase	A4JX00	Burkholderia_virus	2.6e-160	93.5
WP_085504493.1\|1271823_1273083_-\|portal	phage portal protein	Q8W6U7	Burkholderia_virus	7.5e-229	94.5
WP_085504494.1\|1273087_1273273_-	hypothetical protein	Q8W6U8	Burkholderia_virus	5.2e-14	73.8
WP_085504495.1\|1273269_1274982_-\|terminase	terminase large subunit	Q8W6U9	Burkholderia_virus	0.0e+00	97.0
WP_085504496.1\|1274991_1275477_-\|terminase	phage terminase small subunit P27 family	Q8W6V0	Burkholderia_virus	2.2e-83	95.0
WP_085504497.1\|1275625_1275982_-	HNH endonuclease	Q8W6N0	Burkholderia_virus	7.7e-62	94.9
WP_004549735.1\|1276042_1276300_+	type II toxin-antitoxin system RelE/ParE family toxin	Q8W6N1	Burkholderia_virus	2.4e-41	100.0
WP_019254588.1\|1276296_1276683_+	helix-turn-helix transcriptional regulator	Q8W6N2	Burkholderia_virus	3.0e-64	98.4
WP_009901158.1\|1276949_1277474_+	hypothetical protein	NA	NA	NA	NA
WP_085504498.1\|1277667_1279242_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	4.8e-124	46.6
WP_085504499.1\|1279305_1279653_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_143751642.1\|1279640_1280036_-\|transposase	transposase	NA	NA	NA	NA
WP_038708291.1\|1280116_1280923_+	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_085504500.1\|1281350_1282922_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_019254590.1\|1283233_1283881_-	hypothetical protein	Q8W6N4	Burkholderia_virus	6.0e-105	92.6
WP_085504501.1\|1283889_1284150_-	hypothetical protein	A4JX60	Burkholderia_virus	5.6e-38	94.9
WP_085504502.1\|1284466_1284883_-	DUF1364 family protein	Q6JIF7	Burkholderia_virus	2.7e-50	70.0
WP_019254593.1\|1284879_1285254_-	hypothetical protein	Q6JIF8	Burkholderia_virus	4.0e-61	95.2
WP_085504503.1\|1285250_1285802_-	DUF1064 domain-containing protein	A4JX56	Burkholderia_virus	6.9e-94	96.2
WP_085504504.1\|1285798_1286791_-	helix-turn-helix domain-containing protein	A4JX55	Burkholderia_virus	4.9e-175	98.2
WP_010110014.1\|1286944_1287205_-	helix-turn-helix domain-containing protein	Q6JIG2	Burkholderia_virus	1.3e-34	87.2
WP_085504505.1\|1287201_1288023_-	hypothetical protein	Q8W6P2	Burkholderia_virus	1.0e-141	97.1
WP_085504506.1\|1288052_1289144_-	site-specific DNA-methyltransferase	Q8W6P4	Burkholderia_virus	2.0e-153	67.8
WP_085504507.1\|1289140_1290310_-	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	1.6e-116	58.9
WP_010110021.1\|1290320_1290761_-	hypothetical protein	Q8W6P5	Burkholderia_virus	1.0e-68	89.0
WP_085504508.1\|1290944_1291181_+	hypothetical protein	NA	NA	NA	NA
WP_085504762.1\|1291432_1291672_+	hypothetical protein	NA	NA	NA	NA
WP_085504509.1\|1291678_1291921_-	hypothetical protein	NA	NA	NA	NA
WP_085504510.1\|1292002_1292392_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_157130438.1\|1292646_1292919_+	hypothetical protein	NA	NA	NA	NA
WP_085504512.1\|1292952_1293858_+	hypothetical protein	NA	NA	NA	NA
WP_157130439.1\|1294327_1294786_+	hypothetical protein	NA	NA	NA	NA
WP_085504763.1\|1295666_1295960_+	hypothetical protein	Q8W6Q1	Burkholderia_virus	1.2e-36	86.2
WP_041190251.1\|1295970_1296096_+	hypothetical protein	Q8W6Q2	Burkholderia_virus	2.4e-07	82.9
WP_157130440.1\|1296465_1296744_-	hypothetical protein	NA	NA	NA	NA
WP_085504513.1\|1297034_1297184_+	hypothetical protein	Q8W6Q6	Burkholderia_virus	1.8e-17	91.8
WP_085504514.1\|1297180_1297993_+	prohibitin family protein	Q8W6Q7	Burkholderia_virus	2.9e-141	95.9
WP_085504515.1\|1298253_1298961_+	hypothetical protein	Q6JII4	Burkholderia_virus	4.7e-119	90.6
WP_085504516.1\|1298975_1300421_+	hypothetical protein	Q6V7T8	Burkholderia_virus	2.4e-37	43.3
WP_157130441.1\|1300417_1300576_+	hypothetical protein	NA	NA	NA	NA
WP_157130442.1\|1300568_1300808_+	hypothetical protein	Q6JIJ1	Burkholderia_virus	5.4e-27	77.0
WP_085504518.1\|1300804_1301065_+	hypothetical protein	A9YWU5	Burkholderia_phage	3.8e-34	81.2
WP_157130443.1\|1301914_1302172_-	DUF1488 family protein	NA	NA	NA	NA
WP_085504520.1\|1302207_1302870_+	hypothetical protein	A0A0U1SZL2	Pseudomonas_phage	1.3e-30	41.4
WP_085504521.1\|1302872_1303202_-	hypothetical protein	NA	NA	NA	NA
WP_085504522.1\|1303250_1303493_-	hypothetical protein	Q6JIJ4	Burkholderia_virus	1.5e-29	84.6
WP_085504523.1\|1303502_1303712_-	hypothetical protein	Q6JIJ5	Burkholderia_virus	3.5e-30	88.4
WP_085504524.1\|1303793_1304030_-	hypothetical protein	Q6JIJ6	Burkholderia_virus	8.4e-33	86.5
WP_085504525.1\|1304352_1305552_+\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	8.2e-108	52.6
WP_004529901.1\|1305816_1307832_-	cation acetate symporter	NA	NA	NA	NA
1305665:1305694	attR	NA	NA	NA	NA
WP_004545569.1\|1307825_1308206_-	DUF4212 domain-containing protein	NA	NA	NA	NA
WP_004188376.1\|1308303_1310286_-	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	1.8e-83	44.8

DBSCAN-SWA_3

1687275 : 1750485

Ralstonia_phage(28.57%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004523686.1\|1687275_1687794_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004523687.1\|1687795_1689676_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004523688.1\|1689672_1690722_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_009967433.1\|1690740_1691811_+	type VI secretion protein ImpA	NA	NA	NA	NA
WP_004536657.1\|1691865_1692894_+	fimbrial protein	NA	NA	NA	NA
WP_038718765.1\|1692926_1694285_+	hypothetical protein	A0A292GJ55	Xanthomonas_phage	9.0e-111	45.6
WP_028200913.1\|1694177_1697630_-	RHS repeat protein	NA	NA	NA	NA
WP_004523693.1\|1697642_1697912_-	PAAR motif protein	NA	NA	NA	NA
WP_080361227.1\|1697986_1700668_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.3e-35	26.0
WP_004529647.1\|1700732_1701302_-	hypothetical protein	NA	NA	NA	NA
WP_009981084.1\|1701491_1705400_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_085504565.1\|1705414_1706713_-	type VI secretion system protein TssL	NA	NA	NA	NA
WP_004523698.1\|1706709_1708059_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_095413485.1\|1708064_1708607_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004529642.1\|1708734_1709217_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004523699.1\|1709416_1710916_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004523700.1\|1710949_1711489_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004523701.1\|1711866_1713543_-	OmpA family protein	NA	NA	NA	NA
WP_076847500.1\|1713545_1714202_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_025986099.1\|1714266_1714839_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_076896864.1\|1714831_1717465_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_004533804.1\|1717688_1718426_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_004533867.1\|1718490_1719036_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_085504566.1\|1719621_1720215_+	hypothetical protein	NA	NA	NA	NA
WP_004523708.1\|1720187_1720403_-	hypothetical protein	NA	NA	NA	NA
WP_085504567.1\|1720438_1721926_+	PhoPQ-regulated protein	NA	NA	NA	NA
WP_085504568.1\|1721992_1724014_-	hypothetical protein	A0A2C9CZG8	Yersinia_phage	4.7e-07	46.1
WP_157129648.1\|1724862_1725222_+	hypothetical protein	NA	NA	NA	NA
WP_028201534.1\|1725566_1727024_+	hypothetical protein	NA	NA	NA	NA
WP_004533827.1\|1727716_1727920_+	hypothetical protein	NA	NA	NA	NA
WP_004523716.1\|1728174_1729770_+	cytochrome c oxidase subunit I	R9VX24	Flavobacterium_phage	1.9e-06	33.3
WP_085504771.1\|1729850_1730474_+	DUF2244 domain-containing protein	NA	NA	NA	NA
WP_009967412.1\|1731059_1731752_-	hypothetical protein	NA	NA	NA	NA
WP_004523720.1\|1732223_1732550_+	thioredoxin family protein	NA	NA	NA	NA
WP_004523721.1\|1732569_1732989_+	YjbQ family protein	NA	NA	NA	NA
WP_045597630.1\|1733403_1733667_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_076854649.1\|1733676_1735032_-	DUF2875 domain-containing protein	NA	NA	NA	NA
WP_085962187.1\|1735096_1736331_-\|transposase	IS3-like element ISButh1 family transposase	A0A1B0Z042	Pseudomonas_phage	3.1e-102	65.2
WP_085504569.1\|1736688_1738929_-	DUF3274 domain-containing protein	A0A077K801	Ralstonia_phage	7.5e-22	27.1
WP_004528499.1\|1742047_1742353_-	H-NS histone family protein	NA	NA	NA	NA
WP_004552621.1\|1742940_1743972_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_004533801.1\|1743968_1744823_-	ABC transporter permease	NA	NA	NA	NA
WP_004533742.1\|1744806_1745727_-	ABC transporter permease	NA	NA	NA	NA
WP_085504772.1\|1746210_1746663_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_009939053.1\|1746682_1747702_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_080002191.1\|1747698_1747953_-	SET domain-containing protein-lysine N-methyltransferase	NA	NA	NA	NA
WP_023358215.1\|1749315_1750485_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	1.9e-32	30.1

DBSCAN-SWA_4

2148778 : 2214353

Acanthocystis_turfacea_Chlorella_virus(14.29%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004190585.1\|2148778_2150182_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004190689.1\|2150197_2151514_+	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_085504612.1\|2151516_2155146_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_085504781.1\|2155151_2156066_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_004529325.1\|2156050_2156278_-	hypothetical protein	NA	NA	NA	NA
WP_085504613.1\|2156276_2158913_+	serine/threonine protein kinase	M1I231	Acanthocystis_turfacea_Chlorella_virus	5.1e-09	26.6
WP_009982092.1\|2158965_2160045_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004524810.1\|2160107_2160686_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_085504614.1\|2160678_2162187_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004190698.1\|2162246_2162738_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_009935240.1\|2162756_2163305_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004524812.1\|2163309_2165181_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_122877902.1\|2165177_2166623_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_085504615.1\|2166635_2169302_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	5.2e-78	30.6
WP_085504616.1\|2169298_2171503_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	4.8e-45	29.9
WP_028200695.1\|2173416_2174685_+	hypothetical protein	NA	NA	NA	NA
WP_085504782.1\|2174698_2179330_+	type IV secretion protein Rhs	A0A2H4JFP5	uncultured_Caudovirales_phage	8.3e-23	34.9
WP_004533385.1\|2179921_2180185_+	hypothetical protein	NA	NA	NA	NA
WP_071811406.1\|2180185_2180383_+	hypothetical protein	NA	NA	NA	NA
WP_085504618.1\|2180534_2189903_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_129112169.1\|2189903_2190209_+	hypothetical protein	NA	NA	NA	NA
WP_071811408.1\|2190176_2190542_-	hypothetical protein	NA	NA	NA	NA
WP_025986261.1\|2190790_2192545_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_004539275.1\|2192758_2193487_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.2e-21	31.2
WP_011205721.1\|2193581_2194487_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_004529289.1\|2194559_2194979_-	PaaI family thioesterase	NA	NA	NA	NA
WP_085504619.1\|2194992_2196846_-	fatty acyl-AMP ligase	NA	NA	NA	NA
WP_004529287.1\|2196842_2197868_-	amidohydrolase	NA	NA	NA	NA
WP_004544778.1\|2197908_2198949_-	acyl-CoA desaturase	NA	NA	NA	NA
WP_004539278.1\|2198945_2199881_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_009927010.1\|2199893_2200178_-	acyl carrier protein	NA	NA	NA	NA
WP_004524878.1\|2200203_2201115_-	fatty acid desaturase	NA	NA	NA	NA
WP_025986259.1\|2202223_2203885_-	AMP-binding protein	A0A1V0SBX8	Catovirus	3.5e-32	25.2
WP_004533395.1\|2204247_2205132_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_004537121.1\|2205166_2207173_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_085504620.1\|2207169_2208012_-	enoyl-CoA hydratase	NA	NA	NA	NA
WP_004529278.1\|2208018_2209170_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_004544675.1\|2209182_2210799_-	acyl-CoA carboxylase subunit beta	NA	NA	NA	NA
WP_004529276.1\|2210800_2211661_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	7.1e-13	28.0
WP_009969373.1\|2211987_2213160_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_085504122.1\|2213258_2214353_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

2526422 : 2562909

Burkholderia_phage(20.0%)

tRNA,portal,integrase,transposase,protease

attL 2551742:2551758|attR 2574158:2574174

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004544833.1\|2526422_2527109_-\|integrase	tyrosine-type recombinase/integrase	E5E3N4	Burkholderia_phage	1.4e-96	83.0
WP_009969175.1\|2527105_2527393_-\|portal	phage portal protein	K4NZV0	Burkholderia_phage	6.4e-43	93.3
WP_004529037.1\|2527638_2527776_+	hypothetical protein	NA	NA	NA	NA
WP_004544614.1\|2528025_2528214_-	hypothetical protein	NA	NA	NA	NA
WP_004540326.1\|2528330_2529557_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_009940975.1\|2529563_2529737_-	hypothetical protein	NA	NA	NA	NA
WP_004540321.1\|2529735_2529999_+	hypothetical protein	NA	NA	NA	NA
WP_009940974.1\|2529923_2530100_+	hypothetical protein	NA	NA	NA	NA
WP_004552023.1\|2530434_2530926_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_009969172.1\|2531585_2531870_-	membrane protein	NA	NA	NA	NA
WP_004190924.1\|2532021_2532291_-	hypothetical protein	NA	NA	NA	NA
WP_004530319.1\|2532287_2533037_-	TIGR00730 family Rossman fold protein	A0A1D8KUT5	Synechococcus_phage	5.6e-22	37.8
WP_085504657.1\|2533038_2535810_+	DNA polymerase I	S5M8J1	Bacillus_phage	2.2e-71	30.0
WP_004190401.1\|2536128_2537511_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_009926480.1\|2537774_2539568_-	membrane protein	NA	NA	NA	NA
WP_009934941.1\|2539741_2539834_+	hypothetical protein	NA	NA	NA	NA
WP_009950014.1\|2539906_2540128_+	hypothetical protein	NA	NA	NA	NA
WP_004190499.1\|2540287_2541163_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_004190656.1\|2541221_2542091_-	sulfurtransferase	NA	NA	NA	NA
WP_082248404.1\|2542214_2543678_+\|transposase	IS1182-like element ISBma2 family transposase	A0A1X9I5T2	Streptococcus_phage	6.8e-80	38.6
WP_004190814.1\|2543829_2544936_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_004190549.1\|2545205_2545499_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_004525142.1\|2545495_2546380_+	(2E,6E)-farnesyl diphosphate synthase	NA	NA	NA	NA
WP_004540286.1\|2546463_2548368_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_004195713.1\|2548518_2549328_+	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
WP_085504787.1\|2549707_2550748_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.3e-93	53.1
WP_085504658.1\|2550887_2552111_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
2551742:2551758	attL	NA	NA	NA	NA
WP_004190342.1\|2552190_2552403_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_004190948.1\|2552569_2553016_+	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	8.8e-23	48.6
WP_004529022.1\|2553110_2554985_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	6.4e-67	36.2
WP_004549232.1\|2555031_2555370_-	hypothetical protein	NA	NA	NA	NA
WP_004190933.1\|2555428_2557471_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	4.2e-35	32.0
WP_085504659.1\|2557883_2559182_-	TniQ family protein	NA	NA	NA	NA
WP_085504660.1\|2559178_2560216_-	AAA family ATPase	NA	NA	NA	NA
WP_085504661.1\|2560224_2561634_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_085962187.1\|2561674_2562909_-\|transposase	IS3-like element ISButh1 family transposase	A0A1B0Z042	Pseudomonas_phage	3.1e-102	65.2
2574158:2574174	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018380

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018381

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection