CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018411	Burkholderia pseudomallei strain 3000015237 chromosome 2, complete sequence	2 crisprs	cas3,csa3,DinG	10	16	3	0
NZ_CP018410	Burkholderia pseudomallei strain 3000015237 chromosome 1, complete sequence	0 crisprs	csa3,DEDDh,cas3,WYL	0	0	11	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018411_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018411_1

501785-503104

Orphan

Consensus_repeat	Method
CCCGTNGCCGTGCTNNNN	CRT

31 spacers

The CRISPR arrays of NZ_CP018411_1

>merge|NZ_CP018411|1|501785-503104|CRT
CCCATCGCCGTGCTCGATTCACCCGACGCGGTAGCATCCTGGCCCGTTGCCGTGCTGTTGTTCCCCGTTGCTTGCGAACCTTGGCCCGTCGCCGTGCTCGATTCACCCGACGCGTTAGCATCCTGCCCCGTTGCCGTGCTGTTGCTGCCCGTCGCTTGCGAGCCTTGGCCCATCGCCGTGCTCGATTCACCCGACGCGGTGGCATCCTGCCCCGTTGCCGTGCTTGATGTGCCCGACGCGGTGGCATCCTGACCCGTTGCCGTGCTGTTGTTCCCCGTCGCTTGCGAGCCTTGGCCTGTCGCCGTGCTCGATTCACCCGACGCGTTAGCATCCTGCCCCGTTGCCGTGCTGTTGCTGCCCGTCGCTTGCGAACCTTGGCCCGTCGCCGTGCTCGATGTGCCCGACGCGGTGGCATCCTGGCCCGTTGCCGTGCTGTTGCTGCCCGTCGCTTGCGAGCCTTGGCCCATCGCCGTGCTCGATTCACCCGACGCGGTGGCATCCTGCCCCGTTGCCGTGCTGTTGCTGCCCGTCGCTTGCGAACCTTGGCCCATCGCCGTGCTCGATTCACCCGACGCGGTGGCATCCTGCCCCGTTGCCGTGCTGTTGCTGCCCGTCGCTTGCGAACCTTGGCCCATCGCCGTGCTCGATTCACCCGACGCGGTGGCATCCTGCCCCGTTGCCGTGCTGTTGTTCCCCGTCGCTTGCGAACCTTGGCCCGTTGCCGTGCTCGATGTGCCCGACGCGGTGGCATCCTGACCCGTTGCCGTGCTGTTGTTCCCCGTCGCTTGCGAACCTTGGCCCGTTGCCGTGCTCGATGTGCCCGACGCGGTGGCATCCTGACCCGTTGCCGTGCTGTTGTCCCCCGTCGCTTGCGAGCCTTGGCCCGTTGCCGTGCTGTTGCTGCCCGTCGCTTGCGAGCCTTGGCCCGTCGCCGTGCTCGATTCACCCGACGCGGTAGCACCCTGGCCCGTTGCCGTGCTGTTGTCCCCCGTCGCTTGCGAACCTTGGCCCGTCGCCGTGCTCGATTCACCCGACGCGGTAGCACCCTGGCCCGTTGCCGTGCTGTTGTCCCCCGTCGCTTGCGAACCTTGGCCCGTCGCCGTGCTCGATTCACCCGACGCGGTGGCATCCTGCCCCGTTGCCGTGCTGTTGCTGCCCGTCGCTTGCGAACCTTGGCCCGTCGCCGTGCTCGATGCACCCGACGCAGTGGCATCCTGACCCGTTGCCGTGCTGTTGCTACCCGTCGCATGCGAGCCTTGGCCCGTTGCCGTGCTATGACTGCCCGTCGCCTGCGCACCGTTACCCAGTGCGGTGCTTTGC

>NZ_CP018411|1|1|501785-503104|CRT
CCCATCGCCGTGCTCGAT	TCACCCGACGCGGTAGCATCCTGG
CCCGTTGCCGTGCTGTTG	TTCCCCGTTGCTTGCGAACCTTGG
CCCGTCGCCGTGCTCGAT	TCACCCGACGCGTTAGCATCCTGC
CCCGTTGCCGTGCTGTTG	CTGCCCGTCGCTTGCGAGCCTTGG
CCCATCGCCGTGCTCGAT	TCACCCGACGCGGTGGCATCCTGC
CCCGTTGCCGTGCTTGAT	GTGCCCGACGCGGTGGCATCCTGA
CCCGTTGCCGTGCTGTTG	TTCCCCGTCGCTTGCGAGCCTTGG
CCTGTCGCCGTGCTCGAT	TCACCCGACGCGTTAGCATCCTGC
CCCGTTGCCGTGCTGTTG	CTGCCCGTCGCTTGCGAACCTTGG
CCCGTCGCCGTGCTCGAT	GTGCCCGACGCGGTGGCATCCTGG
CCCGTTGCCGTGCTGTTG	CTGCCCGTCGCTTGCGAGCCTTGG
CCCATCGCCGTGCTCGAT	TCACCCGACGCGGTGGCATCCTGC
CCCGTTGCCGTGCTGTTG	CTGCCCGTCGCTTGCGAACCTTGG
CCCATCGCCGTGCTCGAT	TCACCCGACGCGGTGGCATCCTGC
CCCGTTGCCGTGCTGTTG	CTGCCCGTCGCTTGCGAACCTTGG
CCCATCGCCGTGCTCGAT	TCACCCGACGCGGTGGCATCCTGC
CCCGTTGCCGTGCTGTTG	TTCCCCGTCGCTTGCGAACCTTGG
CCCGTTGCCGTGCTCGAT	GTGCCCGACGCGGTGGCATCCTGA
CCCGTTGCCGTGCTGTTG	TTCCCCGTCGCTTGCGAACCTTGG
CCCGTTGCCGTGCTCGAT	GTGCCCGACGCGGTGGCATCCTGA
CCCGTTGCCGTGCTGTTG	TCCCCCGTCGCTTGCGAGCCTTGG
CCCGTTGCCGTGCTGTTG	CTGCCCGTCGCTTGCGAGCCTTGG
CCCGTCGCCGTGCTCGAT	TCACCCGACGCGGTAGCACCCTGG
CCCGTTGCCGTGCTGTTG	TCCCCCGTCGCTTGCGAACCTTGG
CCCGTCGCCGTGCTCGAT	TCACCCGACGCGGTAGCACCCTGG
CCCGTTGCCGTGCTGTTG	TCCCCCGTCGCTTGCGAACCTTGG
CCCGTCGCCGTGCTCGAT	TCACCCGACGCGGTGGCATCCTGC
CCCGTTGCCGTGCTGTTG	CTGCCCGTCGCTTGCGAACCTTGG
CCCGTCGCCGTGCTCGAT	GCACCCGACGCAGTGGCATCCTGA
CCCGTTGCCGTGCTGTTG	CTACCCGTCGCATGCGAGCCTTGG
CCCGTTGCCGTGCTATGA	CTGCCCGTCGCCTGCGCACCGTTA
CCCAGTGCGGTGCTTTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018411.1\|WP_004523721.1\|511791_512211_+\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|223509
NZ_CP018411.1\|WP_038731238.1\|512898_514557_-\|DUF2875-family-protein	unknown	unknown	gnl\|CDD\|288282
NZ_CP018411.1\|WP_004549711.1\|498591_499146_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|284781
NZ_CP018411.1\|WP_085509747.1\|510281_510974_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018411.1\|WP_004523700.1\|489921_490461_-\|type-VI-secretion-system-contractile-sheath-small-subunit	unknown	unknown	gnl\|CDD\|226047
NZ_CP018411.1\|WP_004523716.1\|507396_508992_+\|cytochrome-c-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|238833
NZ_CP018411.1\|WP_028201534.1\|504788_506246_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018411.1\|WP_004545009.1\|499443_500895_+\|PhoPQ-regulated-protein	unknown	unknown	gnl\|CDD\|226737
NZ_CP018411.1\|WP_004523720.1\|511445_511772_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP018411.1\|WP_025986099.1\|493238_493811_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP018411.1\|WP_004523708.1\|499156_499372_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018411.1\|WP_004529635.1\|496659_497382_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|236634
NZ_CP018411.1\|WP_004533867.1\|497461_498007_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP018411.1\|WP_004533827.1\|506938_507142_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018411.1\|WP_004523699.1\|488388_489888_-\|type-VI-secretion-system-contractile-sheath-large-subunit	unknown	unknown	gnl\|CDD\|226048
NZ_CP018411.1\|WP_004524152.1\|512625_512889_-\|PAAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|269829
NZ_CP018411.1\|WP_153260193.1\|504084_504444_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018411.1\|WP_009967413.1\|508988_509696_+\|DUF2244-domain-containing-protein	unknown	unknown	gnl\|CDD\|378350
NZ_CP018411.1\|WP_004537300.1\|492517_493207_-\|DotU-family-type-IV/VI-secretion-system-protein	unknown	unknown	gnl\|CDD\|378275
NZ_CP018411.1\|WP_038725385.1\|490838_492515_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586

Protein	Function_ID	Function_description	E-value
NZ_CP018411.1\|WP_004549711.1\|498591_499146_+\|hypothetical-protein	gnl\|CDD\|284781	pfam07437, YfaZ, YfaZ precursor. This family contains the precursor of the bacterial protein YfaZ (approximately 180 residues long). Many members of this family are hypothetical proteins.	1.94915e-11
NZ_CP018411.1\|WP_004523721.1\|511791_512211_+\|YjbQ-family-protein	gnl\|CDD\|223509	COG0432, COG0432, Uncharacterized conserved protein [Function unknown].	1.018e-53
NZ_CP018411.1\|WP_004523700.1\|489921_490461_-\|type-VI-secretion-system-contractile-sheath-small-subunit	gnl\|CDD\|226047	COG3516, COG3516, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	7.24528e-84
NZ_CP018411.1\|WP_004523716.1\|507396_508992_+\|cytochrome-c-oxidase-subunit-I	gnl\|CDD\|238833	cd01663, Cyt_c_Oxidase_I, Cytochrome C oxidase subunit I. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Only subunits I and II are essential for function, but subunit III, which is also conserved, may play a role in assembly or oxygen delivery to the active site. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Subunit I contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme (heme a3) and a copper ion (CuB). It also contains a low-spin heme (heme a), believed to participate in the transfer of electrons to the binuclear center. For every reduction of an O2 molecule, eight protons are taken from the inside aqueous compartment and four electrons are taken from cytochrome c on the opposite side of the membrane. The four electrons and four of the protons are used in the reduction of O2; the four remaining protons are pumped across the membrane. This charge separation of four charges contributes to the electrochemical gradient used for ATP synthesis. Two proton channels, the D-pathway and K-pathway, leading to the binuclear center have been identified in subunit I. A well-defined pathway for the transfer of pumped protons beyond the binuclear center has not been identified. Electrons are transferred from cytochrome c (the electron donor) to heme a via the CuA binuclear site in subunit II, and directly from heme a to the binuclear center.	0
NZ_CP018411.1\|WP_004545009.1\|499443_500895_+\|PhoPQ-regulated-protein	gnl\|CDD\|226737	COG4287, PqaA, PhoPQ-activated pathogenicity-related protein [General function prediction only].	0
NZ_CP018411.1\|WP_004523720.1\|511445_511772_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	5.63925e-18
NZ_CP018411.1\|WP_025986099.1\|493238_493811_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	2.14812e-22
NZ_CP018411.1\|WP_004529635.1\|496659_497382_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|236634	PRK09926, PRK09926, fimbrial chaperone.	6.76191e-96
NZ_CP018411.1\|WP_004533867.1\|497461_498007_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	6.50534e-21
NZ_CP018411.1\|WP_004523699.1\|488388_489888_-\|type-VI-secretion-system-contractile-sheath-large-subunit	gnl\|CDD\|226048	COG3517, COG3517, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	0
NZ_CP018411.1\|WP_004524152.1\|512625_512889_-\|PAAR-domain-containing-protein	gnl\|CDD\|269829	cd14744, PAAR_CT_2, proline-alanine-alanine-arginine (PAAR) domain with uncharacterized C-terminal extension. This domain is found in the PAAR (proline-alanine-alanine-arginine) repeat family of mostly beta- and gamma-proteobacteria, and forms a sharp conical extension on the VgrG spike, a trimeric protein complex of the bacterial type VI secretion system (T6SS). Most members contain C-terminal domain extensions corresponding to several uncharacterized domains such as S-type pyocin, DUF2235, DUF2345 and cytotoxic proteins. However, these terminal domains are exposed to solution, and do not distort the binding site of VgrG. The pointed tip of the PAAR domain is stabilized by a zinc atom positioned close to the cone's vertex and is likely to be important for its integrity during penetration of the target cell envelope. VgrG proteins are orthologous to the central baseplate spikes of bacteriophages with contractile tails, and genes encoding proteins with PAAR motifs have been frequently found immediately downstream from vgrG-like genes.	6.77264e-23
NZ_CP018411.1\|WP_038731238.1\|512898_514557_-\|DUF2875-family-protein	gnl\|CDD\|288282	pfam11394, DUF2875, Protein of unknown function (DUF2875). This family of proteins with unknown function appear to be restricted to Proteobacteria.	0
NZ_CP018411.1\|WP_009967413.1\|508988_509696_+\|DUF2244-domain-containing-protein	gnl\|CDD\|378350	pfam10003, DUF2244, Integral membrane protein (DUF2244). This domain, found in various bacterial hypothetical and putative membrane proteins, has no known function.	1.60511e-36
NZ_CP018411.1\|WP_004537300.1\|492517_493207_-\|DotU-family-type-IV/VI-secretion-system-protein	gnl\|CDD\|378275	pfam09850, DotU, Type VI secretion system protein DotU. DotU is a family of Gram-negative bacterial proteins that form part of the membrane-joining complex of the type VI secretion system. DotU binds tightly to IcmF and together they are tethered to the inner membrane at one end and the peptidoglycan layer at the other; they interact with Lip1 which then tethers the peptidoglycan layer to the outer membrane.	2.62288e-29
NZ_CP018411.1\|WP_038725385.1\|490838_492515_-\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	6.46998e-35

>NZ_CP018411.1|WP_004545009.1|499443_500895_+|PhoPQ-regulated-protein
MLSLAYPRAEAAPIAFPCPIDARRDLTDTLACYRQTVENQPLNYTMTGIVQLPGIEQRTYRLVSQSWSPDQLVRPDTWVHEVALYIPQDALPRRALVIANDGTRHPGEGETPRTPNDFLPDTLADIARSTRTAVISVSDVPNQLLSYADDGKPKAEDDSVARSWTLFMQSPHTRGAMPLHVPMAASIWRAMSLAERELTSLGIHRFVVSGISKRAWTTWLALIGDQRVDAIAPFAIDLLSTRAALENMYRSYGGNWPLAFYPYYAEGIDRTLDSPAFGLLMRIEDPLSYLGTRHGSRLAVPKYIVNASGDDFFVPDNSQRYFDKLPGAKALRMVPNSSHSDIRRATLDSLVPFVKRIQHGKALPQVDAAPIETNGQTILRLRTSERPRQLLLWQATNPLARDFRYACGIRYTSTPIAMNGARPQQLVLVPPTNGWRAYFVEATFDDGFVATSQTYILGDGYPSTSPPAVGGSCRTLLGRDTHS
>NZ_CP018411.1|WP_004523708.1|499156_499372_-|hypothetical-protein
MAIVGEPPEELIDRLLRACRPLAPILPIAPMPQAKRRDERRVLQGKTWREMHRALVPFDRRTIQKEKPAAR
>NZ_CP018411.1|WP_004549711.1|498591_499146_+|hypothetical-protein
MSRTESSIFAKRSDWPRVFSKLGLVASSIGVFAFMPNARASDYSIAIGNGYQSVSRTPTGTGFGFLLDATRSGEDAYSIGSGLSSGVRIGAVSLTVAGKALHVRSADDRSGLTTPVGVIAGIPAASRLSLVARAFYTPRAVFNAALGAYTQATAGVRWTYKPINLEAGWRYEALKGRNGTRDPR
>NZ_CP018411.1|WP_004533867.1|497461_498007_-|type-1-fimbrial-protein
MKKKVVSFAVATLFGLVAAQSVYAQSIDQGQVKFTGELTANTCTIDAGSKDQIVPLPKVSTSALAAPGDVAGSTAFEIKVSKCAADVKKVAAHFEMENMDPNTRTLKNEATGADAATNVTIQLVNSDGTELPVGSTGSYFDVTGTDDARGATMIYGGQYYALDTTTAGKVESHTLFTLAYE
>NZ_CP018411.1|WP_004529635.1|496659_497382_-|fimbria/pilus-periplasmic-chaperone
MCVAVAAACCLASTLSQAAIVITGTRVVYPESSREVNVRLNNVEQSPVLVQAWIDDGNAGASPDEIKVPFVLMPPVFRVEPKKGQTLRVMYTGDDLPKDRESVYWLNVLEIPPKPTVEAEQNLLQLAFRTRIKLFFRPSALEDGNAAQARDQLKWKIVRNEKGVSVLRAENRSPYYISISQATAKSGDKSVQFDPGMVPPFGSKEFVSKHDISTLSTHAEIAYKLLNDYGAEVAGSATAE
>NZ_CP018411.1|WP_025986099.1|493238_493811_-|type-1-fimbrial-protein
MIEMNGLKFRRGAARRWPSIAAAAMFAASAACGAPPSPTVTIKFKGSYNPVTCTVVEGNENKTVHLPTISTSSLANAGETAGATGFDISVLCDGYAGNVLAYFENGPTTNENGNLDVEDPSDGQSASGVQVQLLNGDGSPIKVGDISTMKTVSVEASTPMPIPFFARYYATGKSGAGKVRTYVTFVIQML
>NZ_CP018411.1|WP_004537300.1|492517_493207_-|DotU-family-type-IV/VI-secretion-system-protein
MSIEMPAQPLRMLLQDTMLHVALLTQGARISRVHDWRARCIALVRQFEQALQDGGYRGGIANELGLAQCVFLDEITMRNLSTEQKEEWLRELLQFRFHSIRDGLSKVRARIDRLCRGHSANAALLEMYSLFHEFGLLGDKQGHALADARVSEARPTPGKKAVETAEIWKDGGAANEAAHGRSWRIVGGLLAFAALMTMWLVIDTRLSHEVEQMEVTSGDEAAIHPASGD
>NZ_CP018411.1|WP_038725385.1|490838_492515_-|OmpA-family-protein
MSRQIRFWLVWGAIPFVVLASLCLPLRMQPEWSHVLTIVLIIAAIVLAIEIFEHSRETAQDRTAEAEIDDHELAVIIVAGPHASSLFNSSGDDTAFRREAGALWLRADSVEQLRDTMMRVKASRGRFPDAAVVPLVSESDDESDMRQAFAKWRTELREALCYPDAAYVLPCYLAVYTCLGFKGADGARPKWTGDAIEIGTRQMNAASKVGELLASIRQQLLRPSPTGSSAQCALGLGVFDWLDATALLSSMTMLANTPPFMLKGLTLADVGRRPIRPGAWTRWLTVRTGLHIRQTKSSMAPLPVPRVAKHAESGIREGWSSARHLVSTRASFVPALVFSTVSTLGIAVAVSGWMNSRMIQRVSNDIADYRSGADEWIGRKRFAQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVEVLLIPDVSSDRKASGTEL
>NZ_CP018411.1|WP_004523700.1|489921_490461_-|type-VI-secretion-system-contractile-sheath-small-subunit
MAISNSSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPLEPLPAVGDRKFFSIDIDNFDERMKAMKPRVAFSVPNTLSGDGQLMVDITFESMDDFSPAAIAKKVDALSQLLDARTQLANLQTYMDGKSGAENLVSKVLKDPALLSALAKAPKPVAEQAENRESKEKH
>NZ_CP018411.1|WP_004523699.1|488388_489888_-|type-VI-secretion-system-contractile-sheath-large-subunit
MAARESQARSADAQLATHSDFNALLSREFKPKTEQAREAVEHAVKTLAEQALANSVTLSDDAYKSIEAIIGEIDRKLSEQINLILHHDDFQQLESAWRGLHHLVTNTETDEKLKIRFMDVSKDDLRRTMKRYKGVAWDQSPFFKQIYEEEYGQLGGEPYGCLVADYYFDHTPPDVDLLSSIGKVAAAAHAPFITGASPSVLQMDSWQELANPRDLTKIFTQNLEYAPWNSLRNSEDARYIGLAMPRFLARLPYGIRTNPVDEFDFEESTDGSDHRKYVWANAAYAMAVNINRSFKHYGWCTLIRGVESGGVVENLPCHTFPTDDGGIDMKCPTEIAISDRREAELAKNGFIPLIHRKNTDYAAFIGAQSLQKPAEYYDPDATANANLSARLPYLFACSRFAHYLKCIVRDKIGSFKEREDMQQWLNEWIMNYVDADPANSSQETKARRPLAAAEVVVEDVEGNPGYYQAKFFLRPHFQLEGLTVSLRLVAKLPSVKEAA
>NZ_CP018411.1|WP_153260193.1|504084_504444_+|hypothetical-protein
MMNTPLSTRSTNFNSLVHRLTARLHALVTTRNSSGLLAWKTRDELERLLPAGTPMTHVGWRLGPPHQAVEYPGGCVTWIFLSNGQWLREPGRLLMWSAQTRSLRLTFDREQILTQMQLD
>NZ_CP018411.1|WP_028201534.1|504788_506246_+|hypothetical-protein
MPIRQTHIWIFGFMIACVLAMSGPLTYTFENTFQQTVDIDRKKQGTVAEATAFDARSAEQPSAPDADRMHELPRIDAARSPTDHFDELPIHLAAFGGGEPSPSGPLPPGPLPDTSFAPFPFQHGFDTAIHAGPPIPAPPESTLARTDAPPRDETPFEPGMPQPSETVDTQLSFYADMVAQAIERTAYDSIALAKLDSDTTAPPDLTPERHGALANVNAPMFYADMLTASIHVPPSNDHTLSVPSLLTHQAIGIAWMELFARELPATATQAAPTRHAVSFAATLQAEPFDLAQWSEPDEAHSDGPPLELDGQRTIAPPYPRAGTLPPGTRPTYTDSPPDTGIVQAAAMLATGFESAGKHAAALRGQPPGADECRMGARAIGLGRSGMERLAIEQLVSSARAAYDCARARIHGRATAFANAPASAQPSNHLDANGDPMRIAFLPRLASEPFQEAFSIPGDTAGIASAFAVADDQTGHRNRMAAANSD
>NZ_CP018411.1|WP_004533827.1|506938_507142_+|hypothetical-protein
MADTPQTGATHAFLSARIASNSSKKTFVRRPLGGTRTALSRTGAVNCFTIFHAICCLRRLAARINLG
>NZ_CP018411.1|WP_004523716.1|507396_508992_+|cytochrome-c-oxidase-subunit-I
MSEISTNMPHVRDAAHHAPTGWRRWLFATNHKDIGTLYLLFSIVNLMIGGVMALMIRAELFEPGLQLMRPEFFNQLSTEHGFIMIFGAIMPAFVGLANWMIPLQIGASDMAFARMNNFSFWLLPVSSALLIGSFFVPGGAPAAGWTMYAPLSTQMGPGMDLSIFAIHIAGASSIMGAINIVVTVVNMRAPGLTLMKMPMFAWTWIITSFLLIAIMPVLAGAVTMVLFDRHFGTSFFNASGGGDPVLYQHIFWYFGHPEVYVMILPGFGMISQVIPAFSRKPLFGYASMVYATASIGILSFMVWAHHMFVTGMPVAGQLFFMYATMTIAVPTGVKVFNWVATMWRGSLTFETPMLFSIGFIFVFLIGGLTGVTLAMAPLNVALHGTYYIIAHFHYVMVAASLFSIYAGWYFWVPKWTGYFYDERRGRIHFWGSMISFNVTFFPMHFLGLAGMPRRYADYPAQFTDFNQIATIGAFAFGLMQVYFLFWVALPTYLGKTRRCVDAKPWDGAQGLEWTLPSPAPYHSFETPPAVK
>NZ_CP018411.1|WP_009967413.1|508988_509696_+|DUF2244-domain-containing-protein
MTARPRTRRHARAHADAGANANADADVNMKADARCDTRKHAQRHCTPAFVAHDPRLMTRDVAENRRVWLLKRNCALSPRQSLISMGLLAALTLAIAMPFAIAGAWAVFACAIGEIAAMCGCFLLYARHAVDYDCVALTEQRLEVVQCDGAQLRRYDWNPLWVAVDLDAAHARDPTIRIRHGSETVLVGRHVTLARRRHVAGELNAALAASAGDFGDTDFAPSVRQRQPEPLAAHR
>NZ_CP018411.1|WP_085509747.1|510281_510974_-|hypothetical-protein
MNSQHARFIRPVLGTLCIVSLAALSGCRGDACFGFDGCFDDGGVQTVTLSGTAATGPALASATVNVDCARGSVATLSDGGGHYSVTFDAALPCAITVTSGGTSLHSLAYAGGTFNTTPQTELMLVYLAAQLGTSPARLIGDLPNSSRLQQALENQTNVQAAQTAVVANLQQRYAVMFAVPEFLTTPFFVGQPGVDGDLGVLANAGAIDANGMPDALAVSLLQQAGAAHPL
>NZ_CP018411.1|WP_004523720.1|511445_511772_+|thioredoxin-family-protein
MHSSQAYTADAPTRAEVDALAGATVIEFGANWCGICAGAQPAIRDAFSVHADVRHLKIEDGPGRPLGRSFGIKLWPTLVFLRDGTEVARVVRPTHAEQIETIGFAALV
>NZ_CP018411.1|WP_004523721.1|511791_512211_+|YjbQ-family-protein
MQQSIQHITVEARGRGLVEFTPQVRAFVEVQSVSTGLLTVFCRHTSASLLIQENADPSVQRDIERYFAALAPEDDARYEHDTEGADDMPAHLRTALTQVQLSIPVEHGRMVLGTWQGIYLFEHRRAPHRRDVVLHLIGE
>NZ_CP018411.1|WP_004524152.1|512625_512889_-|PAAR-domain-containing-protein
MRGVIRIGDSTSHGGRVETGREGSTVMGRAVACVGDRCTCPMNGHEHCVIVEGDEDVRIEGRAVAFDGHRTSCGATLVSSMPTSGRV
>NZ_CP018411.1|WP_038731238.1|512898_514557_-|DUF2875-family-protein
MKPRIWPYALGFILMALGWTIVVMARHYHYWQATGQEMPGMVSSIRNGVLVALGVVAAAFTASYFWLHSGSAESAPAATGTASTAPTRSAMDPSENNGASALLAQSGGKFVLEVRGLGLVTGKETNEEIWKAIETKADNHSTYMSQNSADYPANEDERMTEVGLSTRISFKYGARHSVEYWPVPVFIWEPPKASHVSRPANELSGIRQEASLGVTLLLWQEDANTNDGSTIIEKLFAFFDAHPDIPEAIIVTFDGAATRDLNQTPGYVDTFKQSNIPTMPDSMVTLLVSRSDRVDRLIRPYAVEQTENVDKNTTEYDITKLWNFFWEKNNGEGPGSFEAYYQEQQKAAGIQPRAFLGFMSAQWWQTQLPDFWKTISNKGPGEFKPTPYIPVRWTTWQVRQFDNAPLLGYLHRPIDVKLADAHGKPLKTAQQAQALKAGWQQAVDTLPTGETPKRIFYDTTGDRAWVAPINQALAQSGPSAPSLDDVKEGYDIGRRIGNTGISSPLVQIGLGLIASYHEGGASATIHRRPNGTATIVMVSPPTHKQPDVNPFR

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Crispr_ID: NZ_CP018411_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018411_2

1108923-1109015

Orphan

Consensus_repeat	Method
TCGCCGCCGCGCGCGACGACGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018411_2

>merge|NZ_CP018411|2|1108923-1109015|CRISPRCasFinder
TCGCCGCCGCGCGCGACGACGCGCTGAAGGACGCGCTCGCGCAGGCCGCCGCCGAGCGCGAGCGGCTGATCGCCGCCGCGCGCGCCGACGCGC

>NZ_CP018411|2|1|1108923-1109015|CRISPRCasFinder
TCGCCGCCGCGCGCGACGACGCGC	TGAAGGACGCGCTCGCGCAGGCCGCCGCCGAGCGCGAGCGGCTGA
TCGCCGCCGCGCGCGCCGACGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018411.1\|WP_085509814.1\|1104904_1106557_+\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|183615
NZ_CP018411.1\|WP_009969313.1\|1114166_1114676_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018411.1\|WP_004524980.1\|1101336_1102740_-\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|236180
NZ_CP018411.1\|WP_045597583.1\|1113605_1114109_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018411.1\|WP_004188221.1\|1106546_1107002_+\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|184057
NZ_CP018411.1\|WP_004187346.1\|1107757_1108459_+\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|237383
NZ_CP018411.1\|WP_085509816.1\|1109450_1111457_+\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183987
NZ_CP018411.1\|WP_085503033.1\|1100161_1101340_-\|acetate/propionate-family-kinase	unknown	unknown	gnl\|CDD\|235922
NZ_CP018411.1\|WP_004188840.1\|1102750_1104544_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|213656
NZ_CP018411.1\|WP_004524981.1\|1104675_1104933_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018411.1\|WP_004524985.1\|1107452_1107761_+\|membrane-protein	unknown	unknown	gnl\|CDD\|274462
NZ_CP018411.1\|WP_004187193.1\|1108455_1108704_+\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|184067
NZ_CP018411.1\|WP_085509817.1\|1117167_1119003_-\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP018411.1\|WP_004552097.1\|1119152_1120277_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_CP018411.1\|WP_085509815.1\|1106998_1107460_+\|AtpZ/AtpI-family-protein	unknown	unknown	gnl\|CDD\|378198
NZ_CP018411.1\|WP_004524995.1\|1123548_1124622_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP018411.1\|WP_004529178.1\|1112520_1113546_+\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257
NZ_CP018411.1\|WP_085509818.1\|1120279_1123552_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP018411.1\|WP_004533337.1\|1111453_1112302_+\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|376304
NZ_CP018411.1\|WP_004524990.1\|1115216_1116782_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185008

Protein	Function_ID	Function_description	E-value
NZ_CP018411.1\|WP_085509814.1\|1104904_1106557_+\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|183615	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional.	0
NZ_CP018411.1\|WP_004524980.1\|1101336_1102740_-\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	gnl\|CDD\|236180	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated.	0
NZ_CP018411.1\|WP_004188221.1\|1106546_1107002_+\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|184057	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional.	4.44077e-63
NZ_CP018411.1\|WP_004187346.1\|1107757_1108459_+\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|237383	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional.	1.54059e-122
NZ_CP018411.1\|WP_085509816.1\|1109450_1111457_+\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|183987	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional.	0
NZ_CP018411.1\|WP_085503033.1\|1100161_1101340_-\|acetate/propionate-family-kinase	gnl\|CDD\|235922	PRK07058, PRK07058, acetate/propionate family kinase.	0
NZ_CP018411.1\|WP_085509815.1\|1106998_1107460_+\|AtpZ/AtpI-family-protein	gnl\|CDD\|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	8.90579e-17
NZ_CP018411.1\|WP_004188840.1\|1102750_1104544_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|213656	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. [Fatty acid and phospholipid metabolism, Biosynthesis].	6.3979e-179
NZ_CP018411.1\|WP_004524985.1\|1107452_1107761_+\|membrane-protein	gnl\|CDD\|274462	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2. Members of this protein family are uncharacterized, highly hydrophobic proteins encoded in the middle of apparent F1/F0 ATPase operons. We note, however, that this protein is both broadly and sparsely distributed. It is found in about only about two percent of microbial genomes sequenced, with the first ten examples found coming from the Euryarchaeota, Chlorobia, Betaproteobacteria, Deltaproteobacteria, and Planctomycetes. In most of these species, surrounding operon appears to represent a second F1/F0 ATPase system, and the member proteins belong to subfamilies with the same phylogenetic distribution as the current protein family.	4.12229e-10
NZ_CP018411.1\|WP_004187193.1\|1108455_1108704_+\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|184067	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional.	4.45015e-37
NZ_CP018411.1\|WP_085509817.1\|1117167_1119003_-\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	2.83789e-133
NZ_CP018411.1\|WP_004552097.1\|1119152_1120277_-\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	1.904e-25
NZ_CP018411.1\|WP_004524995.1\|1123548_1124622_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	1.83012e-39
NZ_CP018411.1\|WP_004529178.1\|1112520_1113546_+\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP018411.1\|WP_085509818.1\|1120279_1123552_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.22835e-92
NZ_CP018411.1\|WP_004533337.1\|1111453_1112302_+\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|376304	pfam00231, ATP-synt, ATP synthase.	4.46992e-34
NZ_CP018411.1\|WP_004524990.1\|1115216_1116782_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	2.47951e-79

>NZ_CP018411.1|WP_004187193.1|1108455_1108704_+|F0F1-ATP-synthase-subunit-C
MNNLIEVVSIAAAALAVSFGAIGPALAEGRAVGAAMDAIARQPDASGTVSRTLFVGLAMIETMAIYCLVVALLLLFANPFVK
>NZ_CP018411.1|WP_004187346.1|1107757_1108459_+|F0F1-ATP-synthase-subunit-A
MNASPLSTVPLFSVGPVGISAPVLATWAIMAVLVALALVARRRLSVDAPSRLQSVLELFVATVDAQIADTMQTPPARYRALIGTIFVLVFCANGASLVPGVEPPTAHLETDAALALVVLAATLYYGVRARGVRGYLATFAEPTWVMIPLNVVEQLTRTFSLIVRLFGNVMSGVFVIGIVLSLAGLFVPIPLMALDLLTGTVQAYIFMVLSMVFIGAAVSGDETSAPRRGQENT
>NZ_CP018411.1|WP_004524985.1|1107452_1107761_+|membrane-protein
MIEMWETARASFDGIAAAIGLALGFVAGACHFVSLGWNSRLFVAGRAGVALALQLARVALAVAVLVVLARAGFGMLVAGSAGFFAARAIAVRRAAALTGARR
>NZ_CP018411.1|WP_085509815.1|1106998_1107460_+|AtpZ/AtpI-family-protein
MMKRRPPEVKREAHAGAGAAPDDPRDAARRDPPPGSRAARGGATHPAARAAEPAAPKPAADRVERAAHTAAARAARGARDPEPSLGRRLAQIGVLGWTIVAPTLAALALGRWLDRMFATRVFFSAPLLMLGAALGLWLAWRWMKAQQHGDRDD
>NZ_CP018411.1|WP_004188221.1|1106546_1107002_+|F0F1-ATP-synthase-subunit-epsilon
MGAELRVTIATPARVCVDDLPIVSLRAEDASGAFGIRAGHVDFVTLLRASVVRWRTADGATHYAALDGGVLRVTRGARIEIACRDAVLGESLAELEAVVRGVRATQLDEKRRARVDETRLHAQAVRRLLTYLRPEHAKDGVHAPLKPETLE
>NZ_CP018411.1|WP_085509814.1|1104904_1106557_+|F0F1-ATP-synthase-subunit-beta
MADPQATNGTGAACAERDASDVGDVSDVGDARDEGAGRVVAVRGAVVDVAFDGGALPALNEALTIPVDGAAPILAEVHAHLSDAAVRALALGPTGGLRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGISVFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERIASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDVIALLGIDELGADDRRLVGRARRLQRFLTQPFAVTEAFTGQAGASVEIADTIAGCRAILRGDCDDWRESSLYMVGTLDDARRKEAAAREADARREAAAAASGAGPGTTSGTTSGTTSGTTSGTTSDPASGSAEPQGARHGR
>NZ_CP018411.1|WP_004524981.1|1104675_1104933_-|hypothetical-protein
MPFVACGSATVAPVWLVRRWLHHNGARRPPADLGQETGNRQTKRGIAQSETIDASASGADTVRAASIVDSNQIPQTYAWLQWPCQ
>NZ_CP018411.1|WP_004188840.1|1102750_1104544_-|alpha/beta-fold-hydrolase
MDTRHAPESGAPDAPLPAHPPASYAPESPYRIFDLAKEASVAKLTSGLSPASLQLALADWLIHLAAAPGKRAELATLALRHAALLGQYLLEAATGRTPAAPAQPSPGDRRFRAGAWQLEPYRFWHQSFLLAEQWWRAATRDVPGVSPHHEDVVAFSARQMLDTFAPANYVATNPEIAQRTALTGGANLAQGVWNYLDDVRRLITKQPPAGAEQFELGRNLATTPGRVVFRNHLIELLQYSPTTPDVYAQPVLIVPAWIMKYYILDLSAHNSLIRYLVGEGHTVFCISWRNVDASDRDLSLDDYRKLGVMDALDTIGAIVPGEKIHATGYCLGGTLLSIAAAAMANTGDDRLASITLLAAQTDFAEPGELQLFIDDSEIHFLESMMWERGYLGAHQMAGSFQLLMSNDLIWSRVIHDYLLGERTPMIDLMAWNADSTRMPYRMHSEYLRHLFLDNDLATNRYVIDGQTVSVHNIRAPFFVVGTEHDHIAPWRSVYKIHYLSGSDVTFVLTAGGHNAGIVSEPGHAKRHYRMKMTAAAAPSISPDEWLAGATDFEGSWWPAWHAWLARHSSPQRVAPPPLGKPGAHTLGDAPGTYVFQK
>NZ_CP018411.1|WP_004524980.1|1101336_1102740_-|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase
MDREILQNRPFDSLAIGDSASLVRTASRDDIDLFAAMSGDVNPAHLDAAFAAHDLFGHVVVHGMWTGALVSAVLGTKLPGPGTIYLDQTLEFRHPVAPGDTITATVTVAEKRPEKRIVLLDTRCTNQDGHVVLRGTATVIAPDTPITWERVPGPEVAVRRHDRYETFVRDAREQPPLRTAIVHPCSPDALRAAIDARDANLIEPILIGPQAKIRAIADAAGVDLAGVPIEAVEHSHAAAARAVEMGGAGEVAALMKGSLHTDELLAAVIGPASRLRTERRISHVYAMDVPAYPKPLLITDAAINIAPTLEQKRDICQNAVDLLHVLGVERPRVAVLAAVETVNPKMPSTLDAAALTVMAARGQIAGAIVDGPLAFDNAVSAVAAMSKGIASPVAGDADVLLVPDLEAGNMLAKQLMYFAGADAAGLVLGARLPIILTSRADSLRVRIASAALAKLVAERTRAGALAS
>NZ_CP018411.1|WP_085503033.1|1100161_1101340_-|acetate/propionate-family-kinase
MSEPLLLTFNAGSSTLKIGLYSVANGEPAPLGRGKIDFNRAPLQFEYANGSEAHAVPLAAPVTDDLHAVLDEALGWIDAHLSVHELVSVGHRVVHGGDTFDGPVRIDERTLDAIAALVPLAPLHQPQSVRLIRALRHVRPHLPQVASFDTAFHRTQSDLVRRFALPRALFDAGIKRYGFHGLSYRYVAGRLRERHPSIARGKVVAAHLGSGASLCALDAGVSRDTSMGFSTLDGIPMATRCGALDAGVVLHLQKTLGRTLDDVEQMLYHRSGLLGVSGVSGDARALLADPSAGARDALELFAFRIAGETARLAATLGGLDALVFTAGIGEHQPQTRAAVCERLRWLGVELDAHANARNAETVSRDGSRVAVLVVPTDEEQVIARDAASVLHA
>NZ_CP018411.1|WP_085509816.1|1109450_1111457_+|F0F1-ATP-synthase-subunit-alpha
MTPTPDAPAAAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAPAACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAALGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYAQFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDARIAALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAFGGEQARGDADRDADHGANREVSPEASREVSREVSREVSHEADRDAAADAARVAGRAPGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGDAARTAPSPQGGAEANVNADANVDAEAEARHKR
>NZ_CP018411.1|WP_004533337.1|1111453_1112302_+|F0F1-ATP-synthase-subunit-gamma
MSDKLAAIEARTDTARQLQTVIGAMQGVAAARAHEAQQRLPGIRASAATVGAAIGDALSAGARSGDTAAGARAAPRARLVVVLCSEQGFVGAYNAQLIEHATRPEPSVSREYMMVGSRGAMLADAGGVPLVWRTPMAARADDVVHLANRITDALYAHLAKRGAQPVSIVHAMPGGAARLEVTERRLLPFDYARFDTAPRAQPPLVHLPPATLLAELAQAYVFVELCEAAMLAFAAENEARTRAMIAARESVERALGDLLQAYRIARQDEITADIVELAASGL
>NZ_CP018411.1|WP_004529178.1|1112520_1113546_+|alcohol-dehydrogenase-AdhP
MAQYMKAAVVHAFGEPLRIEEVPVPTPGAGQILVNVKASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGFVAAVGEGVRHVKEGDRVGVPWLYTACGHCEYCQTGWETLCHEQQNTGYSVNGSYAEYVLADPNYVGHLPSNVAFDEIAPILCAGVTVYKGIRVTDTRPGQWIAISGIGGLGHVAVQYAKAMGLHVVAVDVAPQKLELARKLGAAFVVDASKDDPAAVIQKEIGGVHGVLVTAVSRGAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESLDFAAEGLVRAHIHRDKLEHINGVFSALREGKVDGRIVLTGQ
>NZ_CP018411.1|WP_045597583.1|1113605_1114109_+|hypothetical-protein
MRGAGRASPSRARRYENVSKEPNTHREAGAPVHRYRLQVRNMNGECRTYELRLSSLDDGYTLEIDEWLNFPDMHLGDVTPVHVSRPVQFAVPAHEFYRRRRAFRTELIESVAAALRAGEVVRMRDSPDEYPGGRAGNPWVNWIRADLRANPGGRPPPVGDDMQDLIH
>NZ_CP018411.1|WP_009969313.1|1114166_1114676_-|hypothetical-protein
MRRIYFLLPDADTARAIVDELLLKRIEWRHIHVVANDRVPLENLPEASIAQSSDLLPALARGTAAGGVTGALAGLAAIAFPPAGLTIAGGAVVAFAIAGAGFGAWVGTMIGVSVPNTRLKHFEDAVDNGELLTMIDVHRDRVEEIEALVKQHHPNAHLEGTDPTIPAFP
>NZ_CP018411.1|WP_004524990.1|1115216_1116782_+|methyl-accepting-chemotaxis-protein
MPTLSFRQKLWLPLVISLIALLLVSISSAWLSYQTRMEERRNDLTNVAHVGLSIVREYAALAQRGVLTDAQARKEALERLRSVRYGSDGYFIVIDSSPRMIMHPIKPDTVGKDLRHVADADGRHHYLTFASVAQSPQGGFVDYVFAHPNAHPAKAVDKLGYVIRYAPWDWIISTGAYIDDIQAAFAKSLCLSAGVFALLAALLALSVVYTNRGIERMIGGDPRIAAHMAGVIASGDLATPFATRREDRSSLMFAISQMRDALANAVAQIRASAGYVATTAGEIADSNMDLSSHTECQATALQQAASSMQRLTERVRDTADRARAASELAGSAARITDRGGDMVVRVVAAMNDIRAESRKMVDIIGVIEGIAFQTNILALNAAVEAARAGNEGRGFAVVASEVRVLAQRSASAAKDIRALIGRAAERVGNGAELVEATGATIGEAQHAICRVTGIVQDIAAAATDQSQGLEQINAAVSQMDSVTRRNATLVEHAAIAAQSLNEQSRCLQDAVAAFRTEALGC
>NZ_CP018411.1|WP_085509817.1|1117167_1119003_-|response-regulator
MHVEVFAQHSSCPGWHGEMARRIRAFDWSATELGPLERWPASLVAAVRTVLASPVPLVMLWGASGYMLYNDAYAAFAGGRHPYLLGQPVELGWPEVADFNRNVMRTCLAGGALSYRDKALVLLRNGRPEEVWMDLYYSPLAGDDGAPAGVLAVVVETTERVLAARHRDRAKAALHETNAELRRLTETLEQRVADAITERASIEEQLRQAQKMEAIGSLTGGIAHDFNNVLQVVSSNLQMLSAELGEDARAQRRIASAANAVARGAQLASHLLAFARRQPLAPAVLEPRGLIDGMREMLHRALGESVHVDADLRDDVWNVLADRHQFENALLNLAINARDAMRGEGTLKITACNIVLDAGRHARRNGLPPGEYVAFDIADNGVGMTPDILERVFEPFFTTKPDGQGTGLGLSMVFGFVKQSGGHTSIESAPGHGTTVRLLLPRCREAPAGEPAAQRRLPAEGGRETILVVEDDADVRLAVVDMLAQLGYKVITASDGEAGLLALESGAPIDLLFTDVIMPGRIKGGELARRAAQRVPPVPVLFTSGYTRDEIFHAGRLDPGVMLLGKPYRRDELAHKVRSVLDAHASARRAHGARHAQADPRAKTAAARVQR
>NZ_CP018411.1|WP_004552097.1|1119152_1120277_-|ABC-transporter-permease
MRRLAIVYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDASPLSARIASAFFPPQFALPRMVTLAEADRGMNAGDFTFVLDIPPNFQRDVLAGRPAQIQLNVDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVDIAMHMRFNPNLDQTWFGSLMEVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSLAFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQLLSGSLTPRESMPFAVQNIMLAAPTTHFVEIGQAILYRGAGIETVWRKFLILAVIGTALFLLSLKRFRKTIGQMA
>NZ_CP018411.1|WP_085509818.1|1120279_1123552_-|ATP-binding-cassette-domain-containing-protein
MSAPSVVRLSDVSLRYGKTVALERITLEIPAGLTIGLIGPDGVGKSSLLALAAGARALQTGAVDALGGDMRSRRHRERVCRRIAYMPQGLGKNLYPTLSVEENLQFFARLFGHDADERRRRIDALTRSTGLFAFLSRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDLIARIRSERPAMSVIVATAYMDEAQRFDWLIAMDAGRVLATGAPAELLARTGCDSLEAAFIALLPEDERRGHKPVTLEPLRADAQTGTAIEARGLTMRFGDFTAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPATEGTAQLFGKTVDPKDINTRRRVGYMSQAFSLYSELTVRQNLVLHARLFGVPAAEIDARVDEMARRFGLADIYDMLPDSLPLGMRQRLSLAVAMVHKPELLILDEPTSGVDPVARDSFWQLMIDLARRDRVTIFISTHFMNEAQRCDRISLMHAGRVLASDAPAALVRARGAATLEEAFIGYLVDASAQEAQGGAGGRPGAGERAAGESLAGRGAATDGDADGAHARPAAYANGAAQHRAPDADAAGTDVAAETGARDDARTAHAAGHSAGNDVRATVGSEVGSEVGSEVGSDVGSDVGSDVASEAGPEAGLAASAESGAERAREPAADITADAGAAIDVEPGASAESATAAVAPARHAESAATSPRAGNAPAGTPFAAAPPSHAAPAEPPHRAFSAQRALSYMWREMLELRRDPVRATLALIGSLVLMCVIGIGISLDVEDLTYAVLDRDQTELSHDYALNLSGSRYFVERPPIADYAALDRRMRDGELSLAIEIPPNFARDVERGAPAQIGMWIDGAMPQRAETIRGYAIGMHTMWLADKARHRLGVTLAPRAEVVTRYRYNPDVKSLPAMIPAVMPLLLLMLPAMLTALAVVRERELGSILNLYVTPVTRTEFLIGKQVPYVVLAMLNFLLMTMLARIAFDVPVKGSFMTLLLAVLIFNVVATGIGLLASTFTRSQVAAIVMTIIGTMIPTVQFAGLLTPLSSLEGTGRLIGLVYPATYMLSISRGVFNKALSLHDLYSQFWPLAASVPVILGATILLLKKQER
>NZ_CP018411.1|WP_004524995.1|1123548_1124622_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MIQVTRKQIVAAAAVVVVALGAYYGWTLLRHQGPGDGFASGNGRIEATEIDVATKLPGRIDAILVDEGDFVKAGQPLANMQIQVLRAQYDEATAQRQRALNTAAGVQSQVAQRKSDKAAAQAMVVLRESELDAAERRLARSQTLSREGASSLQELDDDRARARSAQAAVSAAAAQVAAAQAAIEATEAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQYRVAQPGEVLPAGGKVLNLVDLSDVYMTFFLPETVVGRVALGADARIILDAAPNYVIPATVSFVSSTAQFTPKTVETANERQKLMFRVKARIDRELLQKHLKLVKTGLPGVAWVRVDPSKPWPAQLMVKVPQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP018411_1	1.4\|501929\|24\|NZ_CP018411\|CRT	501929-501952	24	NZ_CP018411.1	501593-501616	1	0.958
NZ_CP018411_1	1.11\|502223\|24\|NZ_CP018411\|CRT	502223-502246	24	NZ_CP018411.1	501593-501616	1	0.958
NZ_CP018411_1	1.21\|502643\|24\|NZ_CP018411\|CRT	502643-502666	24	NZ_CP018411.1	501761-501784	1	0.958
NZ_CP018411_1	1.22\|502685\|24\|NZ_CP018411\|CRT	502685-502708	24	NZ_CP018411.1	501593-501616	1	0.958
NZ_CP018411_1	1.24\|502769\|24\|NZ_CP018411\|CRT	502769-502792	24	NZ_CP018411.1	501677-501700	1	0.958
NZ_CP018411_1	1.26\|502853\|24\|NZ_CP018411\|CRT	502853-502876	24	NZ_CP018411.1	501677-501700	1	0.958
NZ_CP018411_1	1.9\|502139\|24\|NZ_CP018411\|CRT	502139-502162	24	NZ_CP018411.1	501593-501616	2	0.917
NZ_CP018411_1	1.13\|502307\|24\|NZ_CP018411\|CRT	502307-502330	24	NZ_CP018411.1	501593-501616	2	0.917
NZ_CP018411_1	1.15\|502391\|24\|NZ_CP018411\|CRT	502391-502414	24	NZ_CP018411.1	501593-501616	2	0.917
NZ_CP018411_1	1.21\|502643\|24\|NZ_CP018411\|CRT	502643-502666	24	NZ_CP018411.1	501677-501700	2	0.917
NZ_CP018411_1	1.24\|502769\|24\|NZ_CP018411\|CRT	502769-502792	24	NZ_CP018411.1	501761-501784	2	0.917
NZ_CP018411_1	1.26\|502853\|24\|NZ_CP018411\|CRT	502853-502876	24	NZ_CP018411.1	501761-501784	2	0.917
NZ_CP018411_1	1.28\|502937\|24\|NZ_CP018411\|CRT	502937-502960	24	NZ_CP018411.1	501593-501616	2	0.917

1. spacer 1.4|501929|24|NZ_CP018411|CRT matches to position: 501593-501616, mismatch: 1, identity: 0.958

ctgcccgtcgcttgcgagccttgg	CRISPR spacer
ctgcccgccgcttgcgagccttgg	Protospacer
*******.****************

2. spacer 1.11|502223|24|NZ_CP018411|CRT matches to position: 501593-501616, mismatch: 1, identity: 0.958

ctgcccgtcgcttgcgagccttgg	CRISPR spacer
ctgcccgccgcttgcgagccttgg	Protospacer
*******.****************

3. spacer 1.21|502643|24|NZ_CP018411|CRT matches to position: 501761-501784, mismatch: 1, identity: 0.958

tcccccgtcgcttgcgagccttgg	CRISPR spacer
tcccctgtcgcttgcgagccttgg	Protospacer
*****.******************

4. spacer 1.22|502685|24|NZ_CP018411|CRT matches to position: 501593-501616, mismatch: 1, identity: 0.958

ctgcccgtcgcttgcgagccttgg	CRISPR spacer
ctgcccgccgcttgcgagccttgg	Protospacer
*******.****************

5. spacer 1.24|502769|24|NZ_CP018411|CRT matches to position: 501677-501700, mismatch: 1, identity: 0.958

tcccccgtcgcttgcgaaccttgg	CRISPR spacer
tcccccgtcgcttgcgcaccttgg	Protospacer
**************** *******

6. spacer 1.26|502853|24|NZ_CP018411|CRT matches to position: 501677-501700, mismatch: 1, identity: 0.958

tcccccgtcgcttgcgaaccttgg	CRISPR spacer
tcccccgtcgcttgcgcaccttgg	Protospacer
**************** *******

7. spacer 1.9|502139|24|NZ_CP018411|CRT matches to position: 501593-501616, mismatch: 2, identity: 0.917

ctgcccgtcgcttgcgaaccttgg	CRISPR spacer
ctgcccgccgcttgcgagccttgg	Protospacer
*******.*********.******

8. spacer 1.13|502307|24|NZ_CP018411|CRT matches to position: 501593-501616, mismatch: 2, identity: 0.917

ctgcccgtcgcttgcgaaccttgg	CRISPR spacer
ctgcccgccgcttgcgagccttgg	Protospacer
*******.*********.******

9. spacer 1.15|502391|24|NZ_CP018411|CRT matches to position: 501593-501616, mismatch: 2, identity: 0.917

ctgcccgtcgcttgcgaaccttgg	CRISPR spacer
ctgcccgccgcttgcgagccttgg	Protospacer
*******.*********.******

10. spacer 1.21|502643|24|NZ_CP018411|CRT matches to position: 501677-501700, mismatch: 2, identity: 0.917

tcccccgtcgcttgcgagccttgg	CRISPR spacer
tcccccgtcgcttgcgcaccttgg	Protospacer
**************** .******

11. spacer 1.24|502769|24|NZ_CP018411|CRT matches to position: 501761-501784, mismatch: 2, identity: 0.917

tcccccgtcgcttgcgaaccttgg	CRISPR spacer
tcccctgtcgcttgcgagccttgg	Protospacer
*****.***********.******

12. spacer 1.26|502853|24|NZ_CP018411|CRT matches to position: 501761-501784, mismatch: 2, identity: 0.917

tcccccgtcgcttgcgaaccttgg	CRISPR spacer
tcccctgtcgcttgcgagccttgg	Protospacer
*****.***********.******

13. spacer 1.28|502937|24|NZ_CP018411|CRT matches to position: 501593-501616, mismatch: 2, identity: 0.917

ctgcccgtcgcttgcgaaccttgg	CRISPR spacer
ctgcccgccgcttgcgagccttgg	Protospacer
*******.*********.******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018411_1	1.31\|503063\|24\|NZ_CP018411\|CRT	503063-503086	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3366341-3366364	2	0.917
NZ_CP018411_1	1.31\|503063\|24\|NZ_CP018411\|CRT	503063-503086	24	NZ_CP054618	Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence	194448-194471	3	0.875
NZ_CP018411_1	1.31\|503063\|24\|NZ_CP018411\|CRT	503063-503086	24	NZ_CP025552	Streptomyces rimosus strain WT5260 plasmid unnamed, complete sequence	169321-169344	3	0.875
NZ_CP018411_1	1.5\|501971\|24\|NZ_CP018411\|CRT	501971-501994	24	NC_012725	Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence	15063-15086	4	0.833
NZ_CP018411_1	1.5\|501971\|24\|NZ_CP018411\|CRT	501971-501994	24	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	58203-58226	4	0.833
NZ_CP018411_1	1.10\|502181\|24\|NZ_CP018411\|CRT	502181-502204	24	NZ_CP024936	Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence	362719-362742	4	0.833
NZ_CP018411_1	1.12\|502265\|24\|NZ_CP018411\|CRT	502265-502288	24	NC_012725	Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence	15063-15086	4	0.833
NZ_CP018411_1	1.12\|502265\|24\|NZ_CP018411\|CRT	502265-502288	24	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	58203-58226	4	0.833
NZ_CP018411_1	1.14\|502349\|24\|NZ_CP018411\|CRT	502349-502372	24	NC_012725	Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence	15063-15086	4	0.833
NZ_CP018411_1	1.14\|502349\|24\|NZ_CP018411\|CRT	502349-502372	24	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	58203-58226	4	0.833
NZ_CP018411_1	1.16\|502433\|24\|NZ_CP018411\|CRT	502433-502456	24	NC_012725	Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence	15063-15086	4	0.833
NZ_CP018411_1	1.16\|502433\|24\|NZ_CP018411\|CRT	502433-502456	24	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	58203-58226	4	0.833
NZ_CP018411_1	1.17\|502475\|24\|NZ_CP018411\|CRT	502475-502498	24	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	210775-210798	4	0.833
NZ_CP018411_1	1.19\|502559\|24\|NZ_CP018411\|CRT	502559-502582	24	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	210775-210798	4	0.833
NZ_CP018411_1	1.23\|502727\|24\|NZ_CP018411\|CRT	502727-502750	24	NC_012725	Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence	15063-15086	4	0.833
NZ_CP018411_1	1.23\|502727\|24\|NZ_CP018411\|CRT	502727-502750	24	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	58203-58226	4	0.833
NZ_CP018411_1	1.24\|502769\|24\|NZ_CP018411\|CRT	502769-502792	24	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	210775-210798	4	0.833
NZ_CP018411_1	1.25\|502811\|24\|NZ_CP018411\|CRT	502811-502834	24	NC_012725	Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence	15063-15086	4	0.833
NZ_CP018411_1	1.25\|502811\|24\|NZ_CP018411\|CRT	502811-502834	24	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	58203-58226	4	0.833
NZ_CP018411_1	1.26\|502853\|24\|NZ_CP018411\|CRT	502853-502876	24	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	210775-210798	4	0.833
NZ_CP018411_1	1.27\|502895\|24\|NZ_CP018411\|CRT	502895-502918	24	NC_012725	Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence	15063-15086	4	0.833
NZ_CP018411_1	1.27\|502895\|24\|NZ_CP018411\|CRT	502895-502918	24	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	58203-58226	4	0.833
NZ_CP018411_1	1.6\|502013\|24\|NZ_CP018411\|CRT	502013-502036	24	NZ_CP024936	Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence	362719-362742	5	0.792
NZ_CP018411_1	1.18\|502517\|24\|NZ_CP018411\|CRT	502517-502540	24	NZ_CP024936	Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence	362719-362742	5	0.792
NZ_CP018411_1	1.20\|502601\|24\|NZ_CP018411\|CRT	502601-502624	24	NZ_CP024936	Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence	362719-362742	5	0.792
NZ_CP018411_1	1.31\|503063\|24\|NZ_CP018411\|CRT	503063-503086	24	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	640343-640366	5	0.792

1. spacer 1.31|503063|24|NZ_CP018411|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 2, identity: 0.917

ctgcccgtcgcctgcgcaccgtta	CRISPR spacer
ctgcccgtcgccggcgcaccgttc	Protospacer
************ **********

2. spacer 1.31|503063|24|NZ_CP018411|CRT matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 3, identity: 0.875

ctgcccgtcgcctgcgcaccgtta	CRISPR spacer
ctggccgtcgcctgcgcgccgttc	Protospacer
*** *************.*****

3. spacer 1.31|503063|24|NZ_CP018411|CRT matches to NZ_CP025552 (Streptomyces rimosus strain WT5260 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

ctgcccgtcgcctgcgcaccgtta	CRISPR spacer
ctgcccgtcgtctgcgtaccgttg	Protospacer
**********.*****.******.

4. spacer 1.5|501971|24|NZ_CP018411|CRT matches to NC_012725 (Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtggcatcctgc	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
******************.**  .

5. spacer 1.5|501971|24|NZ_CP018411|CRT matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtggcatcctgc	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
******************.**  .

6. spacer 1.10|502181|24|NZ_CP018411|CRT matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 4, identity: 0.833

gtgcccgacgcggtggcatcctgg	CRISPR spacer
ttgcccgacgcggtggcatcggtg	Protospacer
 *******************   *

7. spacer 1.12|502265|24|NZ_CP018411|CRT matches to NC_012725 (Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtggcatcctgc	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
******************.**  .

8. spacer 1.12|502265|24|NZ_CP018411|CRT matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtggcatcctgc	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
******************.**  .

9. spacer 1.14|502349|24|NZ_CP018411|CRT matches to NC_012725 (Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtggcatcctgc	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
******************.**  .

10. spacer 1.14|502349|24|NZ_CP018411|CRT matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtggcatcctgc	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
******************.**  .

11. spacer 1.16|502433|24|NZ_CP018411|CRT matches to NC_012725 (Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtggcatcctgc	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
******************.**  .

12. spacer 1.16|502433|24|NZ_CP018411|CRT matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtggcatcctgc	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
******************.**  .

13. spacer 1.17|502475|24|NZ_CP018411|CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 4, identity: 0.833

ttccccgtcgcttgcgaaccttgg	CRISPR spacer
ggccccgacgcttgcgaaccttgc	Protospacer
  ***** ***************

14. spacer 1.19|502559|24|NZ_CP018411|CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 4, identity: 0.833

ttccccgtcgcttgcgaaccttgg	CRISPR spacer
ggccccgacgcttgcgaaccttgc	Protospacer
  ***** ***************

15. spacer 1.23|502727|24|NZ_CP018411|CRT matches to NC_012725 (Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtagcaccctgg	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
**************.******

16. spacer 1.23|502727|24|NZ_CP018411|CRT matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtagcaccctgg	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
**************.******

17. spacer 1.24|502769|24|NZ_CP018411|CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 4, identity: 0.833

tcccccgtcgcttgcgaaccttgg	CRISPR spacer
ggccccgacgcttgcgaaccttgc	Protospacer
  ***** ***************

18. spacer 1.25|502811|24|NZ_CP018411|CRT matches to NC_012725 (Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtagcaccctgg	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
**************.******

19. spacer 1.25|502811|24|NZ_CP018411|CRT matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtagcaccctgg	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
**************.******

20. spacer 1.26|502853|24|NZ_CP018411|CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 4, identity: 0.833

tcccccgtcgcttgcgaaccttgg	CRISPR spacer
ggccccgacgcttgcgaaccttgc	Protospacer
  ***** ***************

21. spacer 1.27|502895|24|NZ_CP018411|CRT matches to NC_012725 (Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtggcatcctgc	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
******************.**  .

22. spacer 1.27|502895|24|NZ_CP018411|CRT matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtggcatcctgc	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
******************.**  .

23. spacer 1.6|502013|24|NZ_CP018411|CRT matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 5, identity: 0.792

gtgcccgacgcggtggcatcctga	CRISPR spacer
ttgcccgacgcggtggcatcggtg	Protospacer
 *******************   .

24. spacer 1.18|502517|24|NZ_CP018411|CRT matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 5, identity: 0.792

gtgcccgacgcggtggcatcctga	CRISPR spacer
ttgcccgacgcggtggcatcggtg	Protospacer
 *******************   .

25. spacer 1.20|502601|24|NZ_CP018411|CRT matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 5, identity: 0.792

gtgcccgacgcggtggcatcctga	CRISPR spacer
ttgcccgacgcggtggcatcggtg	Protospacer
 *******************   .

26. spacer 1.31|503063|24|NZ_CP018411|CRT matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 5, identity: 0.792

ctgcccgtcgcctgcgcaccgtta	CRISPR spacer
tggcccgtcgcctgcgcaccggct	Protospacer
. ******************* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

930727 : 996291

Acanthocystis_turfacea_Chlorella_virus(14.29%)

transposase,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004530163.1\|930727_932131_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004529328.1\|932146_933463_+	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_085504612.1\|933465_937095_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_164977913.1\|937076_938042_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_004529325.1\|938026_938254_-	hypothetical protein	NA	NA	NA	NA
WP_085503058.1\|938252_940865_+	serine/threonine protein kinase	M1I231	Acanthocystis_turfacea_Chlorella_virus	5.0e-09	26.6
WP_009982092.1\|940904_941984_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004524810.1\|942046_942625_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004190849.1\|942617_944126_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004190698.1\|944185_944677_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_009935240.1\|944695_945244_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004524812.1\|945248_947120_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004537556.1\|947116_948562_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004533146.1\|948574_951241_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	5.2e-78	30.6
WP_085508262.1\|951237_953442_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.3e-45	29.9
WP_164977887.1\|954916_955339_+	hypothetical protein	NA	NA	NA	NA
WP_085509797.1\|955354_956623_+	hypothetical protein	NA	NA	NA	NA
WP_164977914.1\|956609_961268_+	type IV secretion protein Rhs	A0A2H4JFP5	uncultured_Caudovirales_phage	8.3e-23	34.9
WP_085510113.1\|961859_962123_+	putative Immunity protein 75	NA	NA	NA	NA
WP_071811406.1\|962123_962321_+	hypothetical protein	NA	NA	NA	NA
WP_129112169.1\|971839_972145_+	hypothetical protein	NA	NA	NA	NA
WP_071811408.1\|972112_972478_-	hypothetical protein	NA	NA	NA	NA
WP_085509798.1\|972726_974481_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_004539275.1\|974694_975423_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.2e-21	31.2
WP_004536963.1\|975517_976489_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_004529289.1\|976495_976915_-	PaaI family thioesterase	NA	NA	NA	NA
WP_085509799.1\|976928_978782_-	fatty acyl-AMP ligase	NA	NA	NA	NA
WP_009969385.1\|978778_979804_-	amidohydrolase	NA	NA	NA	NA
WP_004544778.1\|979844_980885_-	acyl-CoA desaturase	NA	NA	NA	NA
WP_085509800.1\|980881_981817_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_009927010.1\|981829_982114_-	acyl carrier protein	NA	NA	NA	NA
WP_004548868.1\|982139_983174_-	acyl-CoA desaturase	NA	NA	NA	NA
WP_025986259.1\|984160_985822_-	AMP-binding protein	A0A1V0SBX8	Catovirus	3.5e-32	25.2
WP_009969379.1\|986184_987069_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_004540584.1\|987104_989111_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_085504620.1\|989107_989950_-	enoyl-CoA hydratase	NA	NA	NA	NA
WP_004529278.1\|989956_991108_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_009982064.1\|991120_992737_-	acyl-CoA carboxylase subunit beta	NA	NA	NA	NA
WP_004529276.1\|992738_993599_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	7.1e-13	28.0
WP_009969373.1\|993925_995098_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_080495655.1\|995196_996291_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

2830100 : 2889304

Burkholderia_virus(10.81%)

transposase,tail,plate,head,terminase,capsid,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085509998.1\|2830100_2830868_-	recombinase	K7ZRM9	Xanthomonas_citri_phage	3.5e-11	23.7
WP_085509999.1\|2832969_2833152_-	hypothetical protein	NA	NA	NA	NA
WP_129112310.1\|2833148_2833388_-	hypothetical protein	NA	NA	NA	NA
WP_157130333.1\|2833470_2833629_-	hypothetical protein	NA	NA	NA	NA
WP_129112311.1\|2833625_2833943_-	DUF2528 family protein	Q6QIE6	Burkholderia_phage	2.5e-08	32.0
WP_085510001.1\|2833939_2834143_-	hypothetical protein	NA	NA	NA	NA
WP_085510002.1\|2834142_2834412_-	hypothetical protein	F8WPQ1	Bacillus_phage	8.7e-18	52.3
WP_085510003.1\|2834421_2834637_-	hypothetical protein	NA	NA	NA	NA
WP_129112312.1\|2834950_2835190_-	acyl carrier protein	NA	NA	NA	NA
WP_164977941.1\|2835186_2835345_-	hypothetical protein	NA	NA	NA	NA
WP_129112313.1\|2835475_2835757_-	hypothetical protein	NA	NA	NA	NA
WP_085510005.1\|2835911_2836202_-	hypothetical protein	I6X6S0	Burkholderia_virus	9.4e-26	64.9
WP_129112314.1\|2836201_2836531_-	hypothetical protein	Q3HQW8	Burkholderia_phage	3.7e-18	76.3
WP_085509634.1\|2836776_2837184_+\|transposase	transposase	B6DZU5	Stx2-converting_phage	3.1e-14	36.5
WP_017335489.1\|2837180_2837528_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.2e-40	72.9
WP_085504666.1\|2837557_2839120_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.6e-149	53.5
WP_009982077.1\|2839160_2839757_+	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.0e-27	38.1
WP_085510147.1\|2840108_2840348_-	hypothetical protein	Q6V7Q4	Burkholderia_virus	2.1e-15	75.0
WP_085510007.1\|2840371_2841568_-	hypothetical protein	A0A077K9W7	Edwardsiella_phage	7.6e-13	41.9
WP_085510008.1\|2841564_2841753_-	hypothetical protein	NA	NA	NA	NA
WP_157129866.1\|2841749_2841887_-	hypothetical protein	NA	NA	NA	NA
WP_085510009.1\|2841888_2842167_-	hypothetical protein	NA	NA	NA	NA
WP_164977942.1\|2843090_2843252_-	hypothetical protein	NA	NA	NA	NA
WP_129112316.1\|2843379_2843577_+	hypothetical protein	NA	NA	NA	NA
WP_085510010.1\|2843539_2843725_-	hypothetical protein	NA	NA	NA	NA
WP_129112317.1\|2844149_2844548_-	hypothetical protein	NA	NA	NA	NA
WP_085510011.1\|2844626_2844848_+	hypothetical protein	NA	NA	NA	NA
WP_129112318.1\|2845050_2845443_+	hypothetical protein	NA	NA	NA	NA
WP_085510013.1\|2845439_2845637_+	hypothetical protein	NA	NA	NA	NA
WP_129112319.1\|2846208_2846814_+	hypothetical protein	NA	NA	NA	NA
WP_085510015.1\|2846813_2848313_+	DEAD/DEAH box helicase	A0A2I7RTF8	Vibrio_phage	5.1e-83	37.5
WP_129112320.1\|2848299_2848956_+	hypothetical protein	A0A0U1WFE9	Staphylococcus_phage	6.4e-30	41.1
WP_085510148.1\|2848945_2849839_+	hypothetical protein	A0A0H5AWB1	Pseudomonas_phage	4.5e-50	37.7
WP_085510016.1\|2850014_2850365_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	2.7e-35	67.6
WP_164977943.1\|2850373_2850832_+	HNH endonuclease	H9YT15	environmental_Halophage	1.0e-18	38.3
WP_085510018.1\|2850833_2851514_+	HNH endonuclease	NA	NA	NA	NA
WP_085510019.1\|2851510_2851792_+	hypothetical protein	NA	NA	NA	NA
WP_129112321.1\|2851831_2852305_+	hypothetical protein	NA	NA	NA	NA
WP_129112322.1\|2852669_2853002_+	hypothetical protein	NA	NA	NA	NA
WP_085510022.1\|2852998_2853310_+	DUF4406 domain-containing protein	A0A2K8I958	Pseudomonas_phage	9.1e-19	44.8
WP_129112323.1\|2853306_2853789_+	hypothetical protein	A0A2D2W3E4	Mycobacterium_phage	2.2e-35	57.4
WP_129112324.1\|2853812_2854013_+	hypothetical protein	NA	NA	NA	NA
WP_129112325.1\|2854009_2854378_+	hypothetical protein	NA	NA	NA	NA
WP_164977944.1\|2854374_2854551_+	hypothetical protein	NA	NA	NA	NA
WP_085510025.1\|2854547_2854964_+	recombination protein NinB	F1C5C7	Cronobacter_phage	3.8e-28	47.4
WP_164977945.1\|2854960_2855107_+	hypothetical protein	NA	NA	NA	NA
WP_085510149.1\|2855381_2855660_+	hypothetical protein	Q6V7S4	Burkholderia_virus	1.6e-22	62.5
WP_085510026.1\|2855656_2856382_+	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	4.9e-63	50.7
WP_164977946.1\|2856378_2856537_+	hypothetical protein	NA	NA	NA	NA
WP_129112326.1\|2856533_2856725_+	hypothetical protein	NA	NA	NA	NA
WP_129112327.1\|2856721_2856913_+	hypothetical protein	NA	NA	NA	NA
WP_129112328.1\|2856909_2857305_+	hypothetical protein	NA	NA	NA	NA
WP_085510028.1\|2857297_2857813_+	hypothetical protein	NA	NA	NA	NA
WP_129112329.1\|2857907_2858270_+	hypothetical protein	NA	NA	NA	NA
WP_129112330.1\|2858875_2859055_+	hypothetical protein	NA	NA	NA	NA
WP_085510029.1\|2860699_2861188_+	hypothetical protein	A5H1K2	Xanthomonas_virus	9.9e-20	57.3
WP_085510030.1\|2861416_2862586_+	winged helix-turn-helix domain-containing protein	A0A1P8L636	Pectobacterium_phage	3.0e-107	53.2
WP_085510031.1\|2862692_2863400_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_085510032.1\|2863396_2863579_+	hypothetical protein	NA	NA	NA	NA
WP_085510033.1\|2863672_2864371_+	hypothetical protein	NA	NA	NA	NA
WP_129112331.1\|2864608_2865262_+	hypothetical protein	B0VK26	Azospirillum_phage	1.0e-19	43.3
WP_129112332.1\|2865346_2865955_+	hypothetical protein	K4ICN8	Acidithiobacillus_phage	2.4e-07	24.7
WP_085510035.1\|2865890_2868017_+\|terminase	terminase	A0A2K9V3X4	Faecalibacterium_phage	8.0e-98	35.6
WP_085504266.1\|2868061_2868289_+\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
WP_085504265.1\|2868357_2869923_+\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	5.5e-88	34.8
WP_085510036.1\|2869919_2870801_+	S49 family peptidase	A0A1I9KF73	Aeromonas_phage	9.8e-50	39.9
WP_085503778.1\|2872621_2873683_+\|capsid	major capsid protein	V5Q8G6	Xylella_phage	2.9e-48	33.3
WP_085510038.1\|2873970_2874300_+	hypothetical protein	NA	NA	NA	NA
WP_085510039.1\|2874296_2874941_+	ABC transporter permease	NA	NA	NA	NA
WP_085503775.1\|2874951_2875128_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_085510040.1\|2875124_2876606_+\|tail	phage tail protein	B5TK67	Pseudomonas_phage	2.2e-102	44.9
WP_085504264.1\|2876657_2877026_+\|tail	phage tail protein	NA	NA	NA	NA
WP_085503773.1\|2877027_2877312_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_085510041.1\|2877430_2879281_+\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_085510042.1\|2879277_2880735_+	DNA circulation family protein	U5P4I0	Shigella_phage	1.5e-18	22.1
WP_085503770.1\|2880737_2881133_-	hypothetical protein	NA	NA	NA	NA
WP_085510043.1\|2881156_2882248_+	Mu P family protein	M1PVV2	Vibrio_phage	2.7e-33	29.9
WP_085503768.1\|2882244_2882844_+\|plate	phage baseplate assembly protein	Q8HAB9	Salmonella_phage	2.7e-19	37.3
WP_085503767.1\|2882840_2883287_+	hypothetical protein	A0A2P9JZK5	Alteromonadaceae_phage	2.8e-21	38.1
WP_085510044.1\|2883286_2884408_+\|plate	baseplate J/gp47 family protein	A0A0M3LQN4	Mannheimia_phage	3.1e-16	28.2
WP_085510045.1\|2884416_2885064_+	DUF2313 domain-containing protein	NA	NA	NA	NA
WP_085510150.1\|2885345_2886050_+\|tail	phage tail protein	A9YX14	Burkholderia_phage	2.3e-81	71.7
WP_129112333.1\|2886059_2886245_+	hypothetical protein	NA	NA	NA	NA
WP_164977947.1\|2886237_2886849_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_129112334.1\|2887000_2889304_+	hypothetical protein	I6X6U1	Burkholderia_virus	1.5e-12	43.3

DBSCAN-SWA_3

3069749 : 3137556

Aeromonas_phage(25.0%)

plate,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004530063.1\|3069749_3070700_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004523149.1\|3070967_3071912_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_004530060.1\|3072383_3074087_+	thermolysin metallopeptidase	NA	NA	NA	NA
WP_004545903.1\|3074204_3075431_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_004200640.1\|3075485_3076628_-	porin	NA	NA	NA	NA
WP_004198249.1\|3076736_3076859_-	hypothetical protein	NA	NA	NA	NA
WP_004530058.1\|3076855_3077893_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_025986125.1\|3077889_3079443_-\|holin	choline-sulfatase	NA	NA	NA	NA
WP_004554841.1\|3079605_3080478_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004186920.1\|3080621_3081497_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_004530057.1\|3081583_3083239_-	APC family permease	NA	NA	NA	NA
WP_004186918.1\|3083419_3084283_-	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_085510065.1\|3084392_3085538_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_004535147.1\|3085558_3086800_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_004530055.1\|3086851_3087637_-	drug:proton antiporter	NA	NA	NA	NA
WP_004523138.1\|3087633_3088806_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_004186901.1\|3088810_3090736_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004523137.1\|3090738_3092802_-	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_004186987.1\|3092862_3093396_-	4-vinyl reductase	NA	NA	NA	NA
WP_004186989.1\|3093546_3094518_-	membrane dipeptidase	NA	NA	NA	NA
WP_004530801.1\|3094590_3095865_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	5.3e-105	54.1
WP_004198247.1\|3096298_3097324_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_004523135.1\|3097501_3098701_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	8.4e-12	27.2
WP_004530800.1\|3099146_3100163_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_004546670.1\|3100351_3101917_+	glycoside hydrolase 68 family protein	NA	NA	NA	NA
WP_009967873.1\|3102049_3103714_+	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	4.1e-57	31.6
WP_004186853.1\|3104281_3105535_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004528656.1\|3106261_3107845_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_038724161.1\|3107841_3108024_-	hypothetical protein	NA	NA	NA	NA
WP_004186828.1\|3108149_3109145_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_045597683.1\|3109415_3111002_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_162483310.1\|3112206_3112509_+	hypothetical protein	NA	NA	NA	NA
WP_004524288.1\|3112550_3113450_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_004536812.1\|3114000_3114276_-	hypothetical protein	NA	NA	NA	NA
WP_004530792.1\|3114596_3115019_-	hypothetical protein	NA	NA	NA	NA
WP_004190863.1\|3115041_3115401_-	hypothetical protein	NA	NA	NA	NA
WP_085510067.1\|3115459_3118963_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_045597681.1\|3118959_3120618_-	OmpA family protein	NA	NA	NA	NA
WP_004525552.1\|3120700_3122062_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004530042.1\|3122058_3122652_-	type VI secretion lipoprotein TssJ	NA	NA	NA	NA
WP_004190606.1\|3122657_3123047_-	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_004190800.1\|3123089_3123806_-	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_004525550.1\|3123808_3124879_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_004547074.1\|3124878_3127095_-	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_004190563.1\|3127098_3129387_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_085510068.1\|3129552_3131844_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004525547.1\|3131834_3134705_-	type VI secretion system ATPase TssH	A0A2I7REQ1	Vibrio_phage	2.4e-60	27.2
WP_004190851.1\|3134707_3135697_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004196180.1\|3135693_3137556_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018410

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

501818 : 507679

Burkholderia_virus(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004527234.1\|501818_502052_+	hypothetical protein	A4PE26	Ralstonia_virus	4.3e-13	60.6
WP_004531416.1\|502087_502315_-	hypothetical protein	Q8W6S4	Burkholderia_virus	3.8e-22	75.8
WP_004557051.1\|503948_504344_+	hypothetical protein	NA	NA	NA	NA
WP_028200808.1\|504624_505047_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	9.2e-14	48.3
WP_028200809.1\|505043_505550_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	1.0e-19	40.9
WP_071810609.1\|505891_506494_+	hypothetical protein	NA	NA	NA	NA
WP_009920998.1\|506500_507226_+	hypothetical protein	A4PE26	Ralstonia_virus	5.8e-32	44.0
WP_076833215.1\|507246_507432_-	hypothetical protein	Q8W6S4	Burkholderia_virus	4.4e-21	85.2
WP_004196630.1\|507415_507679_-	hypothetical protein	Q8W6S4	Burkholderia_virus	2.2e-26	85.5

DBSCAN-SWA_2

1032927 : 1041801

Tanapox_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012730421.1\|1032927_1033770_+	alpha/beta hydrolase	A7XCB7	Tanapox_virus	3.6e-17	27.0
WP_004522362.1\|1034108_1035032_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	2.4e-43	36.2
WP_164977834.1\|1035210_1036518_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_004550116.1\|1036744_1037647_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	3.3e-53	39.9
WP_004189725.1\|1038005_1038323_-	competence protein ComE	NA	NA	NA	NA
WP_004537712.1\|1038394_1039387_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	9.1e-28	30.9
WP_009921652.1\|1039445_1040369_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.3e-15	27.1
WP_004522358.1\|1040400_1041801_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.9e-79	38.5

DBSCAN-SWA_3

1380085 : 1389329

unidentified_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_028201128.1\|1380085_1381633_+	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	4.3e-24	31.2
WP_004194373.1\|1381669_1382197_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_004532195.1\|1382193_1382877_+	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	2.0e-05	26.0
WP_004194137.1\|1382941_1383757_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	8.8e-37	33.3
WP_085509357.1\|1383939_1385946_-	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VT78	Pandoravirus	1.8e-51	34.3
WP_004533593.1\|1385979_1387110_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	3.8e-22	27.6
WP_004533561.1\|1387376_1389329_-	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	2.7e-148	49.2

DBSCAN-SWA_4

1678437 : 1734596

Pseudomonas_phage(28.57%)

plate,tRNA,integrase,protease

attL 1682658:1682675|attR 1736609:1736626

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004521984.1\|1678437_1679736_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_004527811.1\|1679802_1680885_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	6.7e-08	46.6
WP_004534980.1\|1680928_1681786_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_004186955.1\|1681865_1682174_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_004521981.1\|1682188_1682785_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
1682658:1682675	attL	NA	NA	NA	NA
WP_004521980.1\|1683068_1683857_+	dioxygenase	NA	NA	NA	NA
WP_028200846.1\|1684278_1685880_-	APC family permease	NA	NA	NA	NA
WP_004196837.1\|1686313_1686517_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.3e-21	73.1
WP_004198059.1\|1688595_1689201_-	nitroreductase family protein	NA	NA	NA	NA
WP_004198060.1\|1689162_1689738_+	hypothetical protein	NA	NA	NA	NA
WP_004198061.1\|1689697_1690981_-	MFS transporter	NA	NA	NA	NA
WP_004534987.1\|1691139_1691784_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_004527819.1\|1692121_1692745_+	DUF1415 domain-containing protein	NA	NA	NA	NA
WP_004521971.1\|1692829_1693726_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004535007.1\|1693853_1694990_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004545617.1\|1694966_1695272_+	hypothetical protein	NA	NA	NA	NA
WP_004545603.1\|1695346_1696465_-	acyltransferase	NA	NA	NA	NA
WP_004545599.1\|1696463_1696943_+	hypothetical protein	NA	NA	NA	NA
WP_004199982.1\|1696902_1697406_-	lipoprotein	NA	NA	NA	NA
WP_004204896.1\|1698009_1700175_+	peptidase	A0A0P0IY26	Acinetobacter_phage	1.9e-46	27.1
WP_009945507.1\|1700756_1701155_+	hypothetical protein	NA	NA	NA	NA
WP_004185238.1\|1701230_1701467_+	hypothetical protein	NA	NA	NA	NA
WP_004204906.1\|1701569_1701800_+	hypothetical protein	NA	NA	NA	NA
WP_009967185.1\|1702033_1702390_-	hypothetical protein	NA	NA	NA	NA
WP_004199991.1\|1702415_1703684_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004521963.1\|1703698_1705960_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	4.2e-36	27.8
WP_004199995.1\|1705956_1707405_+	TolC family protein	NA	NA	NA	NA
WP_004555447.1\|1707614_1708601_-	hypothetical protein	NA	NA	NA	NA
WP_004199998.1\|1708726_1709578_+	M15 family metallopeptidase	NA	NA	NA	NA
WP_009967195.1\|1709856_1713750_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004200003.1\|1713746_1714736_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_004535030.1\|1714740_1715673_+	OmpA family protein	NA	NA	NA	NA
WP_004521957.1\|1715871_1716993_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_071810443.1\|1717082_1719752_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	5.0e-89	31.8
WP_004200010.1\|1719785_1720886_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004527836.1\|1720849_1722688_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004204912.1\|1722767_1723250_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004527837.1\|1723307_1723811_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004521953.1\|1723883_1725374_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_009967200.1\|1725390_1725909_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004531875.1\|1725945_1726617_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004521950.1\|1726992_1727607_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004521949.1\|1727715_1729062_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004521948.1\|1729058_1729844_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_080003363.1\|1729930_1730788_+\|integrase	tyrosine-type recombinase/integrase	C8CLF4	Xylella_phage	2.0e-84	58.9
WP_129112226.1\|1731181_1731655_+	hypothetical protein	NA	NA	NA	NA
WP_004527881.1\|1734074_1734596_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.9e-21	51.0
1736609:1736626	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1960164 : 1971908

Stx2-converting_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004195754.1\|1960164_1960809_-	chitin-binding protein	A0A0K1Y848	Apis_mellifera_filamentous_virus	5.7e-07	30.4
WP_009982077.1\|1961593_1962190_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.0e-27	38.1
WP_085504666.1\|1962230_1963793_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.6e-149	53.5
WP_017335489.1\|1963822_1964170_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.2e-40	72.9
WP_085509634.1\|1964166_1964574_-\|transposase	transposase	B6DZU5	Stx2-converting_phage	3.1e-14	36.5
WP_004525721.1\|1964802_1965051_-	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	4.0e-41	97.6
WP_004530408.1\|1965207_1966287_-	DUF3396 domain-containing protein	A9YX32	Burkholderia_phage	2.2e-160	99.0
WP_009932249.1\|1966286_1966739_-	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	2.3e-31	58.8
WP_009932250.1\|1966996_1967539_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	8.1e-47	55.8
WP_004530410.1\|1967792_1968710_-	DUF4935 domain-containing protein	A4PE40	Ralstonia_virus	4.0e-46	40.6
WP_009922658.1\|1968709_1969027_-	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	6.2e-15	57.0
WP_009982080.1\|1969564_1969972_+\|transposase	transposase	B6DZU5	Stx2-converting_phage	1.0e-14	37.2
WP_017335489.1\|1969968_1970316_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.2e-40	72.9
WP_085504666.1\|1970345_1971908_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.6e-149	53.5

DBSCAN-SWA_6

2209017 : 2279579

Liberibacter_phage(17.39%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080495655.1\|2209017_2210112_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_076894123.1\|2210520_2210718_+	hypothetical protein	NA	NA	NA	NA
WP_085509432.1\|2210714_2212217_+	SAM-dependent DNA methyltransferase	A0A220A2U4	Liberibacter_phage	2.0e-151	53.7
WP_085509659.1\|2212306_2213845_+	SAM-dependent DNA methyltransferase	A0A220A2U5	Liberibacter_phage	3.6e-140	57.4
WP_085509433.1\|2213837_2215001_+	restriction endonuclease subunit S	A0A240FAT6	Liberibacter_phage	4.0e-43	47.3
WP_085509434.1\|2214997_2217985_+	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	2.7e-192	39.2
WP_085509435.1\|2217994_2220856_+	chromosome segregation protein SMC	A0A1B1IUG5	uncultured_Mediterranean_phage	2.2e-13	22.7
WP_085509436.1\|2220857_2222126_+	transcriptional regulator	NA	NA	NA	NA
WP_009982080.1\|2222280_2222688_+\|transposase	transposase	B6DZU5	Stx2-converting_phage	1.0e-14	37.2
WP_017335489.1\|2222684_2223032_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.2e-40	72.9
WP_085504666.1\|2223061_2224624_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.6e-149	53.5
WP_009982077.1\|2224664_2225261_+	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.0e-27	38.1
WP_129112240.1\|2225387_2226224_-	hypothetical protein	NA	NA	NA	NA
WP_085509438.1\|2226373_2227591_-	DUF3396 domain-containing protein	E5E3X7	Burkholderia_phage	1.0e-137	66.8
WP_085509439.1\|2227615_2228374_-	VRR-NUC domain-containing protein	A4JWV4	Burkholderia_virus	1.6e-53	47.4
WP_085509440.1\|2228370_2228895_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	4.9e-57	61.6
WP_004200732.1\|2229518_2229923_+	PaaI family thioesterase	NA	NA	NA	NA
WP_004189208.1\|2229960_2230830_+	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_004525849.1\|2230950_2231967_-	D-2-hydroxyacid dehydrogenase family protein	NA	NA	NA	NA
WP_004189230.1\|2232405_2233461_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004525850.1\|2233684_2236294_-	DNA topoisomerase III	A0A2P1ELA0	Moumouvirus	7.7e-18	25.7
WP_004190199.1\|2236504_2236876_-	thioredoxin family protein	NA	NA	NA	NA
WP_004525851.1\|2236935_2238240_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	2.2e-21	39.2
WP_085509441.1\|2238354_2238858_+	peptide deformylase	A0A067XQZ3	Caulobacter_phage	9.3e-13	34.3
WP_004525853.1\|2238889_2239873_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.3e-07	38.0
WP_004525854.1\|2239993_2240629_+	LysE family translocator	NA	NA	NA	NA
WP_004189409.1\|2240738_2241596_+\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_009962382.1\|2242115_2243525_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_004188929.1\|2243521_2244112_+	DUF4390 domain-containing protein	NA	NA	NA	NA
WP_004523096.1\|2244113_2246522_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
WP_004189647.1\|2246522_2247206_+	response regulator	NA	NA	NA	NA
WP_004190026.1\|2247673_2248408_+	7-cyano-7-deazaguanine synthase QueC	A0A1B0Z0B4	Vibrio_phage	1.6e-50	42.5
WP_038729300.1\|2248501_2249134_+	7-carboxy-7-deazaguanine synthase	R4TAH8	Halovirus	8.1e-06	30.2
WP_004189793.1\|2249153_2249606_+	6-carboxytetrahydropterin synthase QueD	A0A088FAL2	Vibrio_phage	7.6e-14	30.8
WP_004189570.1\|2250026_2250812_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
WP_028201345.1\|2250808_2251585_+	sel1 repeat family protein	NA	NA	NA	NA
WP_004525857.1\|2251976_2253125_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_004525858.1\|2253136_2255548_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_004523092.1\|2255731_2256244_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_004189331.1\|2256240_2257314_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_004189550.1\|2257433_2258477_-	rod shape-determining protein	NA	NA	NA	NA
WP_004189769.1\|2258842_2259142_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_004525859.1\|2259254_2260745_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_009962428.1\|2260747_2262220_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_004189747.1\|2262346_2263186_+	hypothetical protein	NA	NA	NA	NA
WP_004190029.1\|2263217_2263988_+	exodeoxyribonuclease III	R4TWA8	Phaeocystis_globosa_virus	3.4e-30	33.8
WP_004531040.1\|2264354_2265419_-	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L339	Tupanvirus	9.9e-81	46.1
WP_004531039.1\|2265630_2266575_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_004534253.1\|2266948_2268001_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_004523086.1\|2267990_2269304_-	AmpG family muropeptide MFS transporter	NA	NA	NA	NA
WP_004545692.1\|2269315_2269930_-	methionine biosynthesis protein MetW	NA	NA	NA	NA
WP_004545672.1\|2269926_2271072_-	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_004525865.1\|2271420_2272113_-	nucleoid occlusion factor SlmA	NA	NA	NA	NA
WP_004198307.1\|2272079_2272883_-	pyrimidine 5'-nucleotidase	NA	NA	NA	NA
WP_004200214.1\|2272879_2273779_-	acetylglutamate kinase	NA	NA	NA	NA
WP_004198312.1\|2274103_2274355_+	cysteine-rich CWC family protein	NA	NA	NA	NA
WP_085503378.1\|2274372_2275653_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_004198315.1\|2275672_2276215_+	response regulator transcription factor	NA	NA	NA	NA
WP_082250115.1\|2276655_2278119_+\|transposase	IS1182-like element ISBma2 family transposase	A0A1X9I5T2	Streptococcus_phage	4.0e-80	38.3
WP_025985937.1\|2278235_2279579_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	5.3e-39	28.4

DBSCAN-SWA_7

2639706 : 2696783

Stx2-converting_phage(21.43%)

protease,tRNA,integrase,transposase

attL 2635688:2635706|attR 2700699:2700717

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2635688:2635706	attL	NA	NA	NA	NA
WP_004202941.1\|2639706_2640312_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_004200150.1\|2640425_2641040_-	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_004195243.1\|2641203_2642160_-	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	5.3e-41	35.5
WP_004195241.1\|2642337_2643219_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_004522859.1\|2643252_2643876_-	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_004530938.1\|2643872_2645693_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004522858.1\|2645781_2646612_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	NA	NA	NA
WP_004195232.1\|2646616_2647723_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_004195230.1\|2648116_2648749_-\|protease	ATP-dependent protease	NA	NA	NA	NA
WP_004530937.1\|2648775_2649669_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	4.4e-05	30.8
WP_004195225.1\|2649754_2650723_-	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_004534308.1\|2650851_2651361_-	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_004195219.1\|2651593_2651953_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_004195216.1\|2652102_2653611_-	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_004195214.1\|2653779_2654556_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-22	28.3
WP_004195213.1\|2654552_2655218_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_085509464.1\|2655236_2655851_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_085509465.1\|2655856_2656396_-	HAD family hydrolase	E3T535	Cafeteria_roenbergensis_virus	8.4e-12	28.0
WP_004195206.1\|2656395_2657379_-	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	9.9e-43	37.5
WP_004522854.1\|2657506_2659516_+	sodium/hydrogen exchanger family protein	NA	NA	NA	NA
WP_020850417.1\|2659599_2660163_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.5e-27	41.1
WP_004526063.1\|2660256_2660871_+	LysE family translocator	NA	NA	NA	NA
WP_009963293.1\|2660883_2661741_+	DUF4743 domain-containing protein	NA	NA	NA	NA
WP_004522850.1\|2661792_2662674_+	formyltetrahydrofolate deformylase	M4QRX9	Synechococcus_phage	4.3e-13	35.7
WP_004202932.1\|2662972_2664058_-	membrane protein	NA	NA	NA	NA
WP_004537849.1\|2664276_2667144_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	2.3e-305	55.0
WP_085509466.1\|2667356_2668544_+	MFS transporter	NA	NA	NA	NA
WP_085509467.1\|2668657_2669224_+	single-stranded DNA-binding protein	C5IHK5	Burkholderia_virus	2.6e-48	87.7
WP_085509662.1\|2669672_2669975_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_129112242.1\|2672254_2672617_+	hypothetical protein	NA	NA	NA	NA
WP_129112243.1\|2672904_2674031_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	4.3e-58	44.7
WP_048984163.1\|2674614_2675022_+\|transposase	transposase	B6DZU5	Stx2-converting_phage	2.1e-15	37.2
WP_049006466.1\|2675018_2675366_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.3e-41	73.8
WP_085509468.1\|2675395_2676958_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.3e-149	54.1
WP_048987429.1\|2676998_2677595_+	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	2.7e-27	39.2
WP_085509469.1\|2678306_2680502_-	hypothetical protein	NA	NA	NA	NA
WP_085509470.1\|2680516_2684719_-	helicase	NA	NA	NA	NA
WP_085509664.1\|2684705_2687258_-	hypothetical protein	NA	NA	NA	NA
WP_085509665.1\|2687458_2689141_-	N-6 DNA methylase	NA	NA	NA	NA
WP_085509471.1\|2689414_2691268_-	DUF3732 domain-containing protein	NA	NA	NA	NA
WP_129112244.1\|2691264_2691711_-	hypothetical protein	NA	NA	NA	NA
WP_129112245.1\|2691703_2692918_-	hypothetical protein	NA	NA	NA	NA
WP_085509474.1\|2694004_2695261_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_085509475.1\|2695244_2696783_+\|integrase	site-specific integrase	NA	NA	NA	NA
2700699:2700717	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3048097 : 3059052

Streptococcus_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004197486.1\|3048097_3050212_-	elongation factor G	E4ZFJ7	Streptococcus_phage	5.8e-56	26.7
WP_004185496.1\|3050509_3051019_-	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.5e-13	41.2
WP_071810810.1\|3051210_3051429_-	hypothetical protein	NA	NA	NA	NA
WP_085503329.1\|3051691_3052270_-	pseudouridine synthase	NA	NA	NA	NA
WP_004189552.1\|3052537_3053797_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.2e-12	63.0
WP_009929279.1\|3053769_3053952_-	hypothetical protein	NA	NA	NA	NA
WP_004536101.1\|3053964_3055575_+	multicopper oxidase family protein	NA	NA	NA	NA
WP_004196460.1\|3055704_3055908_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_004194131.1\|3056440_3056755_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	4.4e-13	44.6
WP_004196461.1\|3056751_3059052_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.1e-167	42.1

DBSCAN-SWA_9

3225362 : 3285950

Burkholderia_phage(86.49%)

terminase,portal,holin,capsid,tail,protease,head,integrase

attL 3245000:3245020|attR 3286023:3286043

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004522511.1\|3225362_3225902_+\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_009969854.1\|3225999_3227136_-	murein-DD-endopeptidase	NA	NA	NA	NA
WP_004200110.1\|3227376_3227601_-	hypothetical protein	NA	NA	NA	NA
WP_004526357.1\|3228057_3228534_+	hypothetical protein	NA	NA	NA	NA
WP_085509519.1\|3230204_3239528_+	contact-dependent inhibition toxin BcpA	A0A0R6PJK4	Moraxella_phage	1.2e-33	33.9
WP_123850157.1\|3239524_3239815_+	hypothetical protein	NA	NA	NA	NA
WP_004543927.1\|3239916_3240096_+	hypothetical protein	NA	NA	NA	NA
WP_020850843.1\|3240114_3240339_+	CDI system lipoprotein BcpO	NA	NA	NA	NA
WP_004556790.1\|3240363_3242121_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_004543939.1\|3242153_3242351_+	hypothetical protein	NA	NA	NA	NA
WP_004541745.1\|3242525_3243110_+	hypothetical protein	NA	NA	NA	NA
WP_164977860.1\|3243415_3243571_-	hypothetical protein	NA	NA	NA	NA
WP_085509520.1\|3243621_3244836_-\|integrase	tyrosine-type recombinase/integrase	A0A1B0VMI6	Pseudomonas_phage	9.6e-88	43.8
3245000:3245020	attL	NA	NA	NA	NA
WP_085509521.1\|3245182_3246193_+\|integrase	site-specific integrase	A0A0A0YR56	Pseudomonas_phage	3.4e-70	51.2
WP_085509522.1\|3246189_3246495_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_164977861.1\|3248222_3248987_-	PRTRC system ThiF family protein	NA	NA	NA	NA
WP_129112250.1\|3248983_3249349_-	hypothetical protein	NA	NA	NA	NA
WP_085509672.1\|3249360_3250152_-	PRTRC system protein A	NA	NA	NA	NA
WP_085509525.1\|3250166_3250880_-	PRTRC system protein B	NA	NA	NA	NA
WP_164977862.1\|3250876_3251938_-	PRTRC system protein F	NA	NA	NA	NA
WP_164977863.1\|3251934_3252120_-	hypothetical protein	NA	NA	NA	NA
WP_085509527.1\|3252116_3252599_-	PRTRC system protein C	NA	NA	NA	NA
WP_085509528.1\|3252613_3253162_-	PRTRC system protein E	NA	NA	NA	NA
WP_085509529.1\|3253183_3253474_-	hypothetical protein	Q546W6	Burkholderia_phage	4.1e-21	56.7
WP_085509530.1\|3253477_3253684_-	hypothetical protein	C7BGF3	Burkholderia_phage	5.3e-23	85.3
WP_129112251.1\|3253813_3254038_-	hypothetical protein	NA	NA	NA	NA
WP_085509531.1\|3254309_3254975_-	helix-turn-helix domain-containing protein	A0A0M3LSL8	Mannheimia_phage	2.0e-31	44.7
WP_085509532.1\|3255073_3255316_+	helix-turn-helix transcriptional regulator	A0A2H4JEY0	uncultured_Caudovirales_phage	1.1e-06	47.1
WP_101633359.1\|3255550_3256072_+	hypothetical protein	C7BGG0	Burkholderia_phage	8.3e-49	63.4
WP_085509534.1\|3256098_3257469_+	replicative DNA helicase	C7BGG1	Burkholderia_phage	1.6e-152	61.2
WP_085509535.1\|3257507_3258518_+	helix-turn-helix domain-containing protein	C7BGG2	Burkholderia_phage	1.8e-71	44.3
WP_085509536.1\|3258530_3258935_+	hypothetical protein	C7BGG3	Burkholderia_phage	9.4e-32	52.2
WP_085509537.1\|3259377_3259746_+	HNH endonuclease	C7BGG5	Burkholderia_phage	1.9e-60	89.3
WP_085509538.1\|3259940_3260444_+	hypothetical protein	C7BGG6	Burkholderia_phage	4.8e-86	92.8
WP_085509539.1\|3260488_3262165_+\|terminase	terminase large subunit	C7BGG7	Burkholderia_phage	0.0e+00	96.2
WP_085509540.1\|3262161_3263451_+\|portal	phage portal protein	C7BGG8	Burkholderia_phage	2.5e-243	97.2
WP_085509673.1\|3263416_3264226_+\|protease	Clp protease ClpP	C7BGG9	Burkholderia_phage	7.7e-102	98.5
WP_085509541.1\|3264294_3265560_+\|capsid	phage major capsid protein	C7BGH0	Burkholderia_phage	7.8e-234	98.1
WP_085509542.1\|3265610_3266195_+	hypothetical protein	C7BGH1	Burkholderia_phage	1.5e-99	93.8
WP_085509543.1\|3266205_3266532_+\|head	phage head closure protein	C7BGH2	Burkholderia_phage	6.3e-55	98.1
WP_085509544.1\|3266942_3267284_+	DUF3168 domain-containing protein	Q3HQT5	Burkholderia_phage	1.8e-39	74.6
WP_085509545.1\|3267343_3267808_+\|tail	phage tail protein	Q4FAS7	Burkholderia_phage	8.1e-72	90.9
WP_085509546.1\|3267836_3268304_+\|tail	phage tail protein	C7BGC7	Burkholderia_phage	2.0e-65	80.0
WP_085509547.1\|3268300_3268579_+	DUF4035 domain-containing protein	Q4FAS6	Burkholderia_phage	9.9e-41	92.4
WP_085509548.1\|3268592_3272693_+\|tail	phage tail tape measure protein	C7BGC8	Burkholderia_phage	0.0e+00	91.3
WP_085509549.1\|3272692_3273031_+\|tail	phage tail protein	C7BGC9	Burkholderia_phage	3.2e-57	94.6
WP_085509550.1\|3274502_3275186_+\|tail	phage minor tail protein L	C7BGD1	Burkholderia_phage	3.8e-118	89.0
WP_085509551.1\|3275235_3275988_+	C40 family peptidase	C7BGD2	Burkholderia_phage	1.2e-141	92.0
WP_085509552.1\|3275984_3276548_+\|tail	tail assembly protein	C7BGD3	Burkholderia_phage	2.4e-94	98.4
WP_085509553.1\|3276544_3280450_+	DUF1983 domain-containing protein	C7BGD4	Burkholderia_phage	0.0e+00	96.5
WP_085509554.1\|3280756_3281473_+	hypothetical protein	C7BGD6	Burkholderia_phage	5.6e-128	91.6
WP_085509555.1\|3281528_3281813_+\|holin	holin	C7BGD7	Burkholderia_phage	5.0e-40	97.9
WP_085509556.1\|3281815_3282265_+	peptidase M15	C7BGD8	Burkholderia_phage	1.9e-70	91.3
WP_085509557.1\|3282261_3282744_+	DUF2514 family protein	C7BGD9	Burkholderia_phage	2.6e-65	84.4
WP_085509558.1\|3282882_3283674_+	DNA adenine methylase	C7BGE1	Burkholderia_phage	1.8e-140	89.7
WP_085509559.1\|3283776_3284673_+	hypothetical protein	C7BGE2	Burkholderia_phage	3.4e-151	91.6
WP_085509560.1\|3284700_3285192_-	hypothetical protein	C7BGE3	Burkholderia_phage	3.7e-83	89.6
WP_085509561.1\|3285245_3285950_+	DUF159 family protein	A0A1S5NTJ1	Burkholderia_phage	3.2e-104	73.4
3286023:3286043	attR	NA	NA	NA	NA

DBSCAN-SWA_10

3663419 : 3703179

Stx2-converting_phage(28.57%)

integrase,transposase

attL 3676628:3676644|attR 3704112:3704128

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009982077.1\|3663419_3664016_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.0e-27	38.1
WP_085509468.1\|3664056_3665619_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.3e-149	54.1
WP_049006466.1\|3665648_3665996_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.3e-41	73.8
WP_085509592.1\|3666308_3666905_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	5.4e-28	39.7
WP_085509593.1\|3666944_3668507_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.7e-142	52.4
WP_025404693.1\|3668536_3668884_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.2e-40	71.0
WP_129112256.1\|3668883_3669246_-\|transposase	transposase	NA	NA	NA	NA
WP_085509678.1\|3669863_3670076_+	hypothetical protein	NA	NA	NA	NA
WP_085509594.1\|3670211_3670442_+	hypothetical protein	NA	NA	NA	NA
WP_006397367.1\|3672209_3672425_-	hypothetical protein	NA	NA	NA	NA
WP_085509595.1\|3672436_3673432_-	endonuclease	A6XMH8	Bacillus_virus	3.9e-55	39.2
WP_085509596.1\|3673501_3673702_-	hypothetical protein	NA	NA	NA	NA
WP_085509597.1\|3673698_3674667_-	DUF932 domain-containing protein	A0A0H4INH5	Stenotrophomonas_phage	5.7e-59	43.3
WP_059844718.1\|3674762_3674990_-	hypothetical protein	NA	NA	NA	NA
WP_085509598.1\|3675791_3676979_+	hypothetical protein	A0A1V0SHS2	Klosneuvirus	9.5e-24	23.5
3676628:3676644	attL	NA	NA	NA	NA
WP_012492498.1\|3677093_3677471_+	DUF3592 domain-containing protein	NA	NA	NA	NA
WP_085509599.1\|3677495_3678068_+	hypothetical protein	NA	NA	NA	NA
WP_129112259.1\|3678069_3678195_-	hypothetical protein	NA	NA	NA	NA
WP_105800266.1\|3678289_3679412_+\|transposase	IS3-like element ISBvi7 family transposase	S5WIU1	Leptospira_phage	5.4e-45	40.7
WP_085509600.1\|3681325_3683437_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	4.4e-64	30.6
WP_129112260.1\|3683448_3684741_+	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_085509601.1\|3684725_3685916_+	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_045579254.1\|3686026_3686824_+	ankryin	NA	NA	NA	NA
WP_129112261.1\|3686923_3687961_+	hypothetical protein	NA	NA	NA	NA
WP_085509602.1\|3687973_3688435_+	hypothetical protein	NA	NA	NA	NA
WP_164977868.1\|3689369_3689528_+	hypothetical protein	NA	NA	NA	NA
WP_085509603.1\|3690885_3691152_+	DUF600 family protein	NA	NA	NA	NA
WP_085509680.1\|3691588_3691903_+	hypothetical protein	NA	NA	NA	NA
WP_164977869.1\|3695946_3697068_+	hypothetical protein	NA	NA	NA	NA
WP_129112262.1\|3697064_3698519_+	hypothetical protein	NA	NA	NA	NA
WP_071810706.1\|3700111_3700540_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5NNJ1	Burkholderia_phage	4.6e-21	47.4
WP_004521809.1\|3700717_3701431_-	hypothetical protein	A4PE26	Ralstonia_virus	1.5e-32	43.3
WP_164977870.1\|3701439_3702033_-	hypothetical protein	NA	NA	NA	NA
WP_129112243.1\|3702052_3703179_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	4.3e-58	44.7
3704112:3704128	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3929873 : 4001055

Stx2-converting_phage(25.0%)

tRNA,integrase,transposase

attL 3957789:3957806|attR 4003908:4003925

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038718503.1\|3929873_3930809_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_004193982.1\|3931078_3932638_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_004521673.1\|3932660_3933896_-	EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_028201109.1\|3933963_3935460_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_004192835.1\|3935559_3936057_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_004191941.1\|3936256_3936397_-	hypothetical protein	NA	NA	NA	NA
WP_004193111.1\|3936349_3938176_+	translational GTPase TypA	NA	NA	NA	NA
WP_004526855.1\|3938514_3941379_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
WP_004526856.1\|3941513_3942791_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
WP_004534933.1\|3942890_3944321_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.4e-42	28.0
WP_085509688.1\|3944427_3945525_+	cell division protein ZapE	NA	NA	NA	NA
WP_004191720.1\|3945719_3946130_+\|transposase	transposase	NA	NA	NA	NA
WP_004526860.1\|3946366_3946828_-	DUF2147 domain-containing protein	NA	NA	NA	NA
WP_004550550.1\|3947071_3948751_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_004521664.1\|3948901_3950167_-	collagen-like triple helix repeat-containing protein	NA	NA	NA	NA
WP_004550548.1\|3950216_3951806_-	collagen-like triple helix repeat-containing protein	NA	NA	NA	NA
WP_004521661.1\|3952443_3952641_+	Flp family type IVb pilin	NA	NA	NA	NA
WP_004521660.1\|3952723_3953224_+	hypothetical protein	NA	NA	NA	NA
WP_004193213.1\|3953220_3953688_+	pilus assembly protein	NA	NA	NA	NA
WP_024430415.1\|3953767_3954667_+	Flp pilus assembly protein CpaB	NA	NA	NA	NA
WP_004192085.1\|3954730_3956056_+	type II and III secretion system protein family protein	NA	NA	NA	NA
WP_004193624.1\|3956122_3957361_+	fimbrial protein	NA	NA	NA	NA
WP_004521658.1\|3957364_3958708_+	CpaF family protein	NA	NA	NA	NA
3957789:3957806	attL	NA	NA	NA	NA
WP_085509627.1\|3958700_3959699_+	pilus assembly protein	NA	NA	NA	NA
WP_004545233.1\|3959704_3960715_+	type II secretion system F family protein	NA	NA	NA	NA
WP_004550545.1\|3960751_3961687_+	pilus assembly protein	NA	NA	NA	NA
WP_038787156.1\|3961708_3962104_+	DUF3613 domain-containing protein	NA	NA	NA	NA
WP_004526869.1\|3962111_3963920_+	membrane protein	NA	NA	NA	NA
WP_009966349.1\|3963936_3965328_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_004531212.1\|3965418_3966132_+	DUF2968 domain-containing protein	NA	NA	NA	NA
WP_004547026.1\|3966282_3966927_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_004521652.1\|3967231_3967504_+	hypothetical protein	NA	NA	NA	NA
WP_017882207.1\|3967679_3968678_-	DUF1571 domain-containing protein	NA	NA	NA	NA
WP_004199468.1\|3968698_3970471_-	long-chain-fatty-acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	6.6e-37	29.9
WP_004526875.1\|3970655_3971606_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_004192776.1\|3971822_3973049_-	MFS transporter	NA	NA	NA	NA
WP_004192889.1\|3973460_3974015_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004193730.1\|3974152_3974779_+	hypothetical protein	NA	NA	NA	NA
WP_004192099.1\|3974825_3976538_+	SulP family inorganic anion transporter	NA	NA	NA	NA
WP_004545114.1\|3976942_3978529_-	hypothetical protein	NA	NA	NA	NA
WP_004193117.1\|3978765_3980253_-	alkaline phosphatase family protein	NA	NA	NA	NA
WP_004191606.1\|3980786_3982499_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	8.3e-13	27.3
WP_085509628.1\|3982908_3983235_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_085509629.1\|3983231_3986174_-	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	8.0e-80	30.6
WP_085509630.1\|3986170_3987484_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_085509631.1\|3987470_3989303_-	N-6 DNA methylase	A0A220A2U4	Liberibacter_phage	1.2e-54	29.4
WP_085509632.1\|3989480_3991502_+	AAA family ATPase	NA	NA	NA	NA
WP_085509633.1\|3991498_3992644_+	AAA family ATPase	NA	NA	NA	NA
WP_129112265.1\|3992653_3993007_+\|transposase	transposase	NA	NA	NA	NA
WP_085509634.1\|3993127_3993535_+\|transposase	transposase	B6DZU5	Stx2-converting_phage	3.1e-14	36.5
WP_017335489.1\|3993531_3993879_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.2e-40	72.9
WP_085504666.1\|3993908_3995471_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.6e-149	53.5
WP_009982077.1\|3995511_3996108_+	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.0e-27	38.1
WP_129112266.1\|3996144_3997065_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.7e-44	40.5
WP_085509635.1\|3997103_3997886_-\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A2H4JAT5	uncultured_Caudovirales_phage	1.7e-50	45.0
WP_004550537.1\|3998616_4001055_+	ribonuclease R	Q0GXV6	Lactococcus_phage	1.5e-68	32.6
4003908:4003925	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018411

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018410

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection