CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018387	Burkholderia pseudomallei strain 2010007509 chromosome 1, complete sequence	0 crisprs	DEDDh,DinG,csa3,cas3,WYL	0	0	9	0
NZ_CP018388	Burkholderia pseudomallei strain 2010007509 chromosome 2, complete sequence	2 crisprs	csa3,cas3,DinG	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

174612 : 228808

Pseudomonas_phage(14.29%)

tRNA,integrase,plate,transposase

attL 216013:216032|attR 232986:233005

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004521984.1\|174612_175911_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_004527811.1\|175977_177060_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	6.7e-08	46.6
WP_085514447.1\|177103_177961_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_004186955.1\|178040_178349_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_004521981.1\|178363_178960_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_004521980.1\|179243_180032_+	dioxygenase	NA	NA	NA	NA
WP_004527813.1\|180535_182137_-	APC family permease	NA	NA	NA	NA
WP_004196837.1\|182570_182774_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.3e-21	73.1
WP_085503478.1\|182880_184344_+\|transposase	IS1182-like element ISBma2 family transposase	A0A1X9I5T2	Streptococcus_phage	1.2e-79	37.9
WP_004555450.1\|184555_185818_-	Hsp70 family protein	NA	NA	NA	NA
WP_004198059.1\|186618_187224_-	nitroreductase family protein	NA	NA	NA	NA
WP_004198060.1\|187185_187761_+	hypothetical protein	NA	NA	NA	NA
WP_004198061.1\|187720_189004_-	MFS transporter	NA	NA	NA	NA
WP_004534987.1\|189162_189807_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011204168.1\|189797_190148_+	hypothetical protein	NA	NA	NA	NA
WP_004527819.1\|190144_190768_+	DUF1415 domain-containing protein	NA	NA	NA	NA
WP_004521971.1\|190852_191749_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004535007.1\|191876_193013_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_085514750.1\|193009_193225_-	hypothetical protein	NA	NA	NA	NA
WP_085514448.1\|193369_194488_-	acyltransferase	NA	NA	NA	NA
WP_052107327.1\|194486_194936_+	hypothetical protein	NA	NA	NA	NA
WP_011205258.1\|194929_195376_-	hypothetical protein	NA	NA	NA	NA
WP_076893105.1\|195902_195998_-	hypothetical protein	NA	NA	NA	NA
WP_004553842.1\|196036_198202_+	peptidase M1	A0A0P0IY26	Acinetobacter_phage	1.9e-46	27.1
WP_009945507.1\|198783_199182_+	hypothetical protein	NA	NA	NA	NA
WP_011205259.1\|199224_199494_+	hypothetical protein	NA	NA	NA	NA
WP_004204906.1\|199596_199827_+	hypothetical protein	NA	NA	NA	NA
WP_076906246.1\|200060_200417_-	hypothetical protein	NA	NA	NA	NA
WP_004199991.1\|200442_201711_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004521963.1\|201725_203987_+	peptidase domain-containing ABC transporter	A0A2R8FG22	Brazilian_cedratvirus	2.3e-10	31.9
WP_004199995.1\|203983_205432_+	TolC family protein	NA	NA	NA	NA
WP_004555447.1\|205641_206628_-	hypothetical protein	NA	NA	NA	NA
WP_004527832.1\|206639_207605_+	M15 family metallopeptidase	NA	NA	NA	NA
WP_009922418.1\|207622_207901_+	hypothetical protein	NA	NA	NA	NA
WP_085514449.1\|207876_211770_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004200003.1\|211766_212756_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_024430742.1\|212760_213693_+	OmpA family protein	NA	NA	NA	NA
WP_004521957.1\|213891_215013_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_009967199.1\|215102_217772_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	2.9e-89	32.0
216013:216032	attL	NA	NA	NA	NA
WP_004200010.1\|217805_218906_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_085514751.1\|218869_220696_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_011205263.1\|220787_221300_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004527837.1\|221327_221831_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004521953.1\|221903_223394_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_009967200.1\|223410_223929_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004531875.1\|223965_224637_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004521950.1\|225012_225627_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004521949.1\|225735_227082_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004521948.1\|227078_227864_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_080003363.1\|227950_228808_+\|integrase	tyrosine-type recombinase/integrase	C8CLF4	Xylella_phage	2.0e-84	58.9
232986:233005	attR	NA	NA	NA	NA

DBSCAN-SWA_2

490965 : 497858

Burkholderia_phage(25.0%)

integrase

attL 488170:488187|attR 504765:504782

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
488170:488187	attL	NA	NA	NA	NA
WP_085514471.1\|490965_491667_-	chitin-binding protein	A0A0K1Y848	Apis_mellifera_filamentous_virus	4.8e-07	30.4
WP_020850756.1\|492123_492300_-	hypothetical protein	NA	NA	NA	NA
WP_004525721.1\|492510_492759_-	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	4.0e-41	97.6
WP_004530408.1\|492915_493995_-	DUF3396 domain-containing protein	A9YX32	Burkholderia_phage	2.2e-160	99.0
WP_009932249.1\|493994_494447_-	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	2.3e-31	58.8
WP_009932250.1\|494704_495247_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	8.1e-47	55.8
WP_004530410.1\|495500_496418_-	hypothetical protein	A4PE40	Ralstonia_virus	4.0e-46	40.6
WP_009922658.1\|496417_496735_-	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	6.2e-15	57.0
WP_004525725.1\|497114_497858_-\|integrase	site-specific integrase	A0A0S2SYQ7	Pseudomonas_phage	9.4e-54	47.3
504765:504782	attR	NA	NA	NA	NA

DBSCAN-SWA_3

687262 : 755621

Liberibacter_phage(16.67%)

tRNA,integrase,transposase,portal

attL 724135:724151|attR 761427:761443

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011205178.1\|687262_688726_+\|transposase	IS1182-like element ISBma2 family transposase	A0A1X9I5T2	Streptococcus_phage	1.5e-79	38.3
WP_004545318.1\|688831_689293_-	transcriptional regulator	NA	NA	NA	NA
WP_004524586.1\|689588_690992_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_009906630.1\|691160_692390_+\|integrase	tyrosine-type recombinase/integrase	Q858E8	Salmonella_phage	1.2e-66	38.7
WP_038740319.1\|692488_693328_+	DNA damage-inducible protein D	A0A1W6JPJ7	Morganella_phage	2.1e-81	69.2
WP_080558221.1\|694036_696904_-	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	6.6e-71	35.2
WP_009907004.1\|697033_697375_-	hypothetical protein	NA	NA	NA	NA
WP_025405247.1\|697371_697629_-	hypothetical protein	NA	NA	NA	NA
WP_009907002.1\|697621_697798_-	hypothetical protein	NA	NA	NA	NA
WP_025405248.1\|698168_698648_-	hypothetical protein	NA	NA	NA	NA
WP_004525824.1\|698647_698818_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_009906999.1\|699048_699561_-	hypothetical protein	NA	NA	NA	NA
WP_025405250.1\|699969_700911_-	hypothetical protein	NA	NA	NA	NA
WP_025405251.1\|700879_701980_-	hypothetical protein	NA	NA	NA	NA
WP_106936425.1\|702006_702156_-	hypothetical protein	NA	NA	NA	NA
WP_085514482.1\|702610_703186_+	recombinase family protein	A0A219Y9V9	Aeromonas_phage	4.2e-25	40.1
WP_157130482.1\|703213_704164_-	hypothetical protein	NA	NA	NA	NA
WP_085514483.1\|704167_705226_-	DGQHR domain-containing protein	NA	NA	NA	NA
WP_076808774.1\|706224_707157_-	hypothetical protein	NA	NA	NA	NA
WP_004525828.1\|707524_708682_+	DUF4382 domain-containing protein	NA	NA	NA	NA
WP_004533510.1\|708744_708900_+	lipoprotein	NA	NA	NA	NA
WP_004554138.1\|709247_709559_+	hypothetical protein	NA	NA	NA	NA
WP_004524603.1\|709576_710137_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_011204742.1\|710625_710970_+	hypothetical protein	NA	NA	NA	NA
WP_004197759.1\|711185_711740_+	YaeQ family protein	NA	NA	NA	NA
WP_004197761.1\|711969_712386_-	lactoylglutathione lyase	NA	NA	NA	NA
WP_004523120.1\|712788_713883_+	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	5.0e-19	37.4
WP_004545654.1\|713879_714821_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
WP_076853110.1\|714991_716593_+	glutamate--cysteine ligase	NA	NA	NA	NA
WP_004531075.1\|716611_718060_-	RNA polymerase sigma factor RpoD/SigA	A0A2I7SAT0	Vibrio_phage	2.9e-30	33.5
WP_009962325.1\|718322_718871_-	hypothetical protein	NA	NA	NA	NA
WP_017843685.1\|719262_719373_+	hypothetical protein	NA	NA	NA	NA
WP_004189874.1\|719461_720031_-	periplasmic heavy metal sensor	NA	NA	NA	NA
WP_004543087.1\|720133_721102_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_009962333.1\|721244_722339_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004536006.1\|722367_723480_+	histone deacetylase	A0A2K9KZC4	Tupanvirus	3.5e-36	30.5
WP_004535322.1\|723490_724366_+	N-carbamoylputrescine amidase	A7IVZ1	Paramecium_bursaria_Chlorella_virus	2.1e-73	47.0
724135:724151	attL	NA	NA	NA	NA
WP_009969932.1\|725384_726410_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_041197015.1\|726406_727288_-	ABC transporter permease	NA	NA	NA	NA
WP_009972644.1\|727284_728139_-	ABC transporter permease	NA	NA	NA	NA
WP_009972645.1\|728323_729337_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_085514485.1\|729343_729778_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_157130483.1\|730917_731973_+\|portal	phage portal protein	A4JWQ2	Burkholderia_virus	3.7e-205	99.1
WP_004188977.1\|732045_732330_-	hypothetical protein	NA	NA	NA	NA
WP_004200731.1\|732326_732809_-	DUF2778 domain-containing protein	NA	NA	NA	NA
WP_085504122.1\|733437_734532_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_076894123.1\|734940_735138_+	hypothetical protein	NA	NA	NA	NA
WP_085509432.1\|735134_736637_+	SAM-dependent DNA methyltransferase	A0A220A2U4	Liberibacter_phage	2.0e-151	53.7
WP_085509659.1\|736726_738265_+	SAM-dependent DNA methyltransferase	A0A220A2U5	Liberibacter_phage	3.6e-140	57.4
WP_085509433.1\|738257_739421_+	restriction endonuclease subunit S	A0A240FAT6	Liberibacter_phage	4.0e-43	47.3
WP_085512352.1\|739417_742405_+	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	4.1e-209	40.6
WP_085514486.1\|742414_745276_+	chromosome segregation protein SMC	A0A1B1IUG5	uncultured_Mediterranean_phage	2.8e-13	22.3
WP_085509436.1\|745277_746546_+	transcriptional regulator	NA	NA	NA	NA
WP_009982080.1\|746700_747108_+\|transposase	transposase	B6DZU5	Stx2-converting_phage	1.0e-14	37.2
WP_017335489.1\|747104_747452_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.2e-40	72.9
WP_085504666.1\|747481_749044_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.6e-149	53.5
WP_080003473.1\|749051_749681_+	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.4e-27	38.1
WP_129112240.1\|749807_750644_-	hypothetical protein	NA	NA	NA	NA
WP_085509438.1\|750793_752011_-	DUF3396 domain-containing protein	E5E3X7	Burkholderia_phage	1.0e-137	66.8
WP_085509439.1\|752035_752794_-	VRR-NUC domain-containing protein	A4JWV4	Burkholderia_virus	1.6e-53	47.4
WP_085509440.1\|752790_753315_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	4.9e-57	61.6
WP_085514487.1\|753902_755273_+\|integrase	integrase family protein	A0A221SAN4	Ralstonia_phage	1.8e-05	23.3
WP_085514488.1\|755303_755621_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2I6TCA4	Escherichia_phage	5.3e-14	47.9
761427:761443	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1551712 : 1562662

Streptococcus_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004197486.1\|1551712_1553827_-	elongation factor G	E4ZFJ7	Streptococcus_phage	5.8e-56	26.7
WP_050869651.1\|1554124_1554628_-	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.4e-13	41.2
WP_071810810.1\|1554819_1555038_-	hypothetical protein	NA	NA	NA	NA
WP_004189780.1\|1555300_1555879_-	pseudouridine synthase	NA	NA	NA	NA
WP_004189552.1\|1556146_1557406_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.2e-12	63.0
WP_009929279.1\|1557378_1557561_-	hypothetical protein	NA	NA	NA	NA
WP_004536101.1\|1557573_1559184_+	multicopper oxidase family protein	NA	NA	NA	NA
WP_004196460.1\|1559314_1559518_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_004194131.1\|1560050_1560365_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	4.4e-13	44.6
WP_004196461.1\|1560361_1562662_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.1e-167	42.1

DBSCAN-SWA_5

2151095 : 2157886

Burkholderia_virus(33.33%)

integrase

attL 2148898:2148918|attR 2174669:2174689

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2148898:2148918	attL	NA	NA	NA	NA
WP_004192768.1\|2151095_2151797_-	peptidoglycan DD-metalloendopeptidase family protein	A0A292GJG6	Xanthomonas_phage	9.9e-13	44.8
WP_004526695.1\|2152093_2153002_-	hypothetical protein	NA	NA	NA	NA
WP_004521810.1\|2153549_2154380_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_071810706.1\|2154688_2155117_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5NNJ1	Burkholderia_phage	4.6e-21	47.4
WP_009941993.1\|2155067_2155274_+	hypothetical protein	Q8W6S4	Burkholderia_virus	3.7e-16	86.7
WP_004521809.1\|2155294_2156008_-	hypothetical protein	A4PE26	Ralstonia_virus	1.5e-32	43.3
WP_011204999.1\|2156016_2156523_-	hypothetical protein	NA	NA	NA	NA
WP_009982284.1\|2156494_2156968_-	hypothetical protein	NA	NA	NA	NA
WP_028200809.1\|2156960_2157467_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	1.0e-19	40.9
WP_028200808.1\|2157463_2157886_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	9.2e-14	48.3
2174669:2174689	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2999239 : 3003720

Burkholderia_virus(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004527234.1\|2999239_2999473_+	hypothetical protein	A4PE26	Ralstonia_virus	4.3e-13	60.6
WP_004531416.1\|2999508_2999736_-	hypothetical protein	Q8W6S4	Burkholderia_virus	3.8e-22	75.8
WP_004557051.1\|2999989_3000385_+	hypothetical protein	NA	NA	NA	NA
WP_028200808.1\|3000665_3001088_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	9.2e-14	48.3
WP_028200809.1\|3001084_3001591_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	1.0e-19	40.9
WP_071810609.1\|3001932_3002535_+	hypothetical protein	NA	NA	NA	NA
WP_076804729.1\|3002955_3003267_+	hypothetical protein	A4PE26	Ralstonia_virus	4.5e-26	60.2
WP_076833215.1\|3003287_3003473_-	hypothetical protein	Q8W6S4	Burkholderia_virus	4.4e-21	85.2
WP_004196630.1\|3003456_3003720_-	hypothetical protein	Q8W6S4	Burkholderia_virus	2.2e-26	85.5

DBSCAN-SWA_7

3519462 : 3528291

Tanapox_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004535490.1\|3519462_3520305_+	alpha/beta hydrolase	A7XCB7	Tanapox_virus	1.4e-16	26.6
WP_004522362.1\|3520643_3521567_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	2.4e-43	36.2
WP_122771151.1\|3521694_3523023_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_004550116.1\|3523249_3524152_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	3.3e-53	39.9
WP_004189725.1\|3524495_3524813_-	competence protein ComE	NA	NA	NA	NA
WP_004537712.1\|3524884_3525877_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	9.1e-28	30.9
WP_009921652.1\|3525935_3526859_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.3e-15	27.1
WP_004537711.1\|3526890_3528291_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	4.2e-79	38.5

DBSCAN-SWA_8

3590901 : 3626656

Stx2-converting_phage(30.0%)

plate,integrase,transposase

attL 3604331:3604345|attR 3621060:3621074

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045591085.1\|3590901_3592365_-\|transposase	IS1182-like element ISBma2 family transposase	A0A1X9I5T2	Streptococcus_phage	1.2e-79	38.3
WP_004522322.1\|3592623_3593184_-	transcription elongation factor GreB	NA	NA	NA	NA
WP_085514684.1\|3593721_3596091_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A291L9W9	Bordetella_phage	2.0e-12	34.8
WP_004185855.1\|3596157_3596361_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_004185877.1\|3596421_3597105_-	guanylate kinase	A0A218KC48	Bacillus_phage	7.4e-13	33.5
WP_004185526.1\|3597111_3598035_-	YicC family protein	NA	NA	NA	NA
WP_004186400.1\|3598206_3598938_+	ribonuclease PH	NA	NA	NA	NA
WP_004186211.1\|3598934_3599567_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
WP_085514685.1\|3599563_3600781_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA
WP_080303461.1\|3601304_3601511_-	hypothetical protein	NA	NA	NA	NA
WP_004534014.1\|3601505_3601715_+	hypothetical protein	A0A077KET4	Ralstonia_phage	1.2e-11	62.7
WP_076849568.1\|3601988_3602567_-	hypothetical protein	NA	NA	NA	NA
WP_004186041.1\|3602740_3603235_+	TonB family protein	NA	NA	NA	NA
WP_009980815.1\|3603653_3604967_+	MHS family MFS transporter	NA	NA	NA	NA
3604331:3604345	attL	NA	NA	NA	NA
WP_004186356.1\|3605147_3605330_+	hypothetical protein	NA	NA	NA	NA
WP_004522315.1\|3605364_3606387_-	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
WP_004532268.1\|3606548_3608210_+	chloride channel protein	NA	NA	NA	NA
WP_004194891.1\|3608326_3608746_-	BcpO-related WXXGXW repeat protein	NA	NA	NA	NA
WP_004186076.1\|3608867_3609122_-	cell division topological specificity factor MinE	NA	NA	NA	NA
WP_004185427.1\|3609134_3609950_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_004522312.1\|3610008_3610821_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_004552529.1\|3610974_3611547_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004541356.1\|3612465_3612738_+	hypothetical protein	NA	NA	NA	NA
WP_085514686.1\|3613129_3614320_+\|integrase	tyrosine-type recombinase/integrase	A0A077KET4	Ralstonia_phage	6.1e-63	40.6
WP_085514687.1\|3614511_3617442_+	DUF4365 domain-containing protein	NA	NA	NA	NA
WP_085962187.1\|3617478_3618712_+\|transposase	IS3-like element ISButh1 family transposase	A0A1B0Z042	Pseudomonas_phage	3.1e-102	65.2
WP_157130501.1\|3618759_3619383_+	hypothetical protein	NA	NA	NA	NA
WP_011205728.1\|3619415_3620045_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.4e-27	38.1
WP_085504666.1\|3620052_3621615_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.6e-149	53.5
3621060:3621074	attR	NA	NA	NA	NA
WP_004524834.1\|3621644_3621992_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.6e-40	72.9
WP_085514782.1\|3621988_3622396_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	2.4e-11	35.7
WP_157130502.1\|3622467_3622914_+	hypothetical protein	NA	NA	NA	NA
WP_085514688.1\|3624844_3626656_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_9

3926991 : 3936258

unidentified_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038752072.1\|3926991_3928539_+	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	4.3e-24	31.2
WP_004194373.1\|3928575_3929103_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_004532195.1\|3929099_3929783_+	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	2.0e-05	26.0
WP_004194137.1\|3929847_3930663_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	8.8e-37	33.3
WP_028201129.1\|3930856_3932875_-	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VT78	Pandoravirus	7.0e-51	34.2
WP_004522147.1\|3932908_3934039_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.7e-22	27.6
WP_004533561.1\|3934305_3936258_-	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	2.7e-148	49.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018388

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018388_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018388_1

347097-347182

Orphan

Consensus_repeat	Method
CGGAATGCCCGATCATCGGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018388_1

>merge|NZ_CP018388|1|347097-347182|CRISPRCasFinder
CGGAATGCCCGATCATCGGGATGCCTGCTCGCCGAAGCACTCCACCGCAGAGGCGCCGCCGCCGGAATACCCGATCATCGGGATGC

>NZ_CP018388|1|1|347097-347182|CRISPRCasFinder
CGGAATGCCCGATCATCGGGATGC	CTGCTCGCCGAAGCACTCCACCGCAGAGGCGCCGCCGC
CGGAATACCCGATCATCGGGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018388.1\|WP_044490955.1\|354574_356392_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223732
NZ_CP018388.1\|WP_009927403.1\|339531_339642_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018388.1\|WP_004545438.1\|347768_349040_+\|polyhydroxyalkanoate-depolymerase	unknown	unknown	gnl\|CDD\|130908
NZ_CP018388.1\|WP_004188381.1\|360491_362297_-\|fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|235730
NZ_CP018388.1\|WP_004530663.1\|356863_357313_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341411
NZ_CP018388.1\|WP_009950893.1\|337222_337528_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240624
NZ_CP018388.1\|WP_004529498.1\|358487_358922_-\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|223149
NZ_CP018388.1\|WP_004532595.1\|351159_352971_+\|bifunctional-aminoglycoside-phosphotransferase/ATP-binding-protein	unknown	unknown	gnl\|CDD\|225098
NZ_CP018388.1\|WP_004196898.1\|337613_338054_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP018388.1\|WP_076804964.1\|340878_341310_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018388.1\|WP_004523279.1\|353546_354578_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236122
NZ_CP018388.1\|WP_009982169.1\|343551_345825_-\|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|369639
NZ_CP018388.1\|WP_085503095.1\|349300_351085_+\|ribonucleotide-reductase-like-protein	unknown	unknown	gnl\|CDD\|180772
NZ_CP018388.1\|WP_154233013.1\|336942_337218_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018388.1\|WP_038793455.1\|341609_343268_+\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP018388.1\|WP_085514812.1\|352987_353449_+\|quinone-oxidoreductase	unknown	unknown	unknown
NZ_CP018388.1\|WP_011204702.1\|359284_360412_-\|porin	unknown	unknown	gnl\|CDD\|238208
NZ_CP018388.1\|WP_004200700.1\|338355_339471_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378454
NZ_CP018388.1\|WP_004523291.1\|339768_340704_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176109
NZ_CP018388.1\|WP_004187469.1\|345957_346353_-\|conjugal-transfer-protein-TraR	unknown	unknown	gnl\|CDD\|224648

Protein	Function_ID	Function_description	E-value
NZ_CP018388.1\|WP_044490955.1\|354574_356392_+\|STAS-domain-containing-protein	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	8.86866e-108
NZ_CP018388.1\|WP_004523279.1\|353546_354578_+\|hypothetical-protein	gnl\|CDD\|236122	PRK07877, PRK07877, Rv1355c family protein.	3.7258e-30
NZ_CP018388.1\|WP_004545438.1\|347768_349040_+\|polyhydroxyalkanoate-depolymerase	gnl\|CDD\|130908	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some [Fatty acid and phospholipid metabolism, Degradation].	2.62791e-114
NZ_CP018388.1\|WP_004188381.1\|360491_362297_-\|fatty-acid--CoA-ligase	gnl\|CDD\|235730	PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP018388.1\|WP_004530663.1\|356863_357313_-\|CBS-domain-containing-protein	gnl\|CDD\|341411	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and archaea. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	3.14402e-50
NZ_CP018388.1\|WP_009950893.1\|337222_337528_-\|hypothetical-protein	gnl\|CDD\|240624	cd05299, CtBP_dh, C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor. The transcriptional corepressor CtBP is a dehydrogenase with sequence and structural similarity to the d2-hydroxyacid dehydrogenase family. CtBP was initially identified as a protein that bound the PXDLS sequence at the adenovirus E1A C terminus, causing the loss of CR-1-mediated transactivation. CtBP binds NAD(H) within a deep cleft, undergoes a conformational change upon NAD binding, and has NAD-dependent dehydrogenase activity.	0.0059154
NZ_CP018388.1\|WP_004529498.1\|358487_358922_-\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	9.00264e-33
NZ_CP018388.1\|WP_004532595.1\|351159_352971_+\|bifunctional-aminoglycoside-phosphotransferase/ATP-binding-protein	gnl\|CDD\|225098	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown].	3.75845e-75
NZ_CP018388.1\|WP_004196898.1\|337613_338054_+\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	3.1145e-25
NZ_CP018388.1\|WP_004523291.1\|339768_340704_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176109	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of dinitrotoluene and similar compounds, such as DntR, NahR, and LinR. The transcription of the genes encoding enzymes involved in such degradation is regulated and expression of these enzymes is enhanced by inducers, which are either an intermediate in the metabolic pathway or compounds to be degraded. Also included are related LysR-type regulators clustered together in phylogenetic trees, including NodD, ToxR, LeuO, SyrM, TdcA, and PnbR. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.07132e-61
NZ_CP018388.1\|WP_085503095.1\|349300_351085_+\|ribonucleotide-reductase-like-protein	gnl\|CDD\|180772	PRK06948, PRK06948, ribonucleotide reductase-like protein; Provisional.	0
NZ_CP018388.1\|WP_038793455.1\|341609_343268_+\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	1.99057e-37
NZ_CP018388.1\|WP_011204702.1\|359284_360412_-\|porin	gnl\|CDD\|238208	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane. Individual 16-strand anti-parallel beta-barrels form a central pore, and trimerizes thru mainly hydrophobic interactions at the interface. Trimers are stabilized by hytrophillic clamping of Loop L2. Loop 3 bends into the pore, creating an elliptical constriction of about 7 x 11A, large enough to allow passage of a glucose molecule without steric hindrance. Removal of the C-terminal residue (usuallly F) destabilizes the trimer and removal of the 16th beta-sheet abolishes trimerization. Unlike typical membrane proteins, porins lack long hydrophobic stretches. Short turns are found at the smooth, periplasmic end, longer irregular loops are found at the rough, extracellular end. C-terminal residue forms salt bridge with N-terminus.	3.6975e-55
NZ_CP018388.1\|WP_004200700.1\|338355_339471_-\|hypothetical-protein	gnl\|CDD\|378454	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport. This family contains polyketide cylcases/dehydrases which are enzymes involved in polyketide synthesis. It also includes other proteins of the START superfamily.	2.16274e-11
NZ_CP018388.1\|WP_009982169.1\|343551_345825_-\|pyridine-nucleotide-disulfide-oxidoreductase	gnl\|CDD\|369639	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.	1.85643e-56
NZ_CP018388.1\|WP_004187469.1\|345957_346353_-\|conjugal-transfer-protein-TraR	gnl\|CDD\|224648	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms].	1.7869e-14

>NZ_CP018388.1|WP_004187469.1|345957_346353_-|conjugal-transfer-protein-TraR
MAAFDEHQLQVLGALLRACRQALQADVRAGERQRADEPYANLAGPAPDEGDEANADLFVDVDHALLGMKLAELRDVDAALQRIARRDYGCCADCGQPIAYERLLARPTALRCAPCQRAHERRFATQPRPSL
>NZ_CP018388.1|WP_009982169.1|343551_345825_-|pyridine-nucleotide-disulfide-oxidoreductase
MREFDYLLVGGGIASVTAARTLRGEDASASIAILCGEPVLPYQRPPLSQEWLMGAVQPVSITLHDAAFYAAQRIDIALGVRAEQLDRAKRIVRTSSGATFRYGKLLIATGASAKAPALPGFGLDGVHVLHTFAQAQALKDAAAHARRATVLGGGFLGVEIAATLQALGLQVTLVERAPGVMPSLRAPALGGHFEALCRARGIDVLTRCEVRRVLGAQCVEAVETSDGGTRPCDLFVAAVGVTPNCGWLDGSGLALGDGVEVDAFLQTADPDVFAAGDVAHFDDPIFGVRRRIEHWDNAVRQGRIAARNMLGHRLPYRDVSIFYGSVFGLSYNLLGYPVGATETIERGAFDEASYMQLYLADDVLRAAFTIDRPAVEIAALNDAIRLHVNVAAHKMKLSDPNYPLDKLPVQTILILQGGGALGAFECGAVKALEQHGVRPDVISAVSIGAFNGAIVASHPKGATKALEAFWRELSIALPLPYESQWREAWLSSYVLSFGVPNFLKPQWSQLGFDADRLRAKWTSFFDATAIEQLIARYVDFDSLGMSPTRLLIGAVDVETGEPRIFDSYVDRLSPAHVLASGSLPPGMPWTVVDGRPYWDGGVVSNSPLDLVIARCGQIGGRVFIVDLFSGSKALPTNLVEVMLRREEIAYMDRVRNDLRFEEYASDFRDLVDGILAHVDAPSANEIRQQPLYIRLMGNRAAIDIARITLNREGRLSFIEDYDFSSDAIAQLQQQGYDAALVALANGRSRRRRGRRRA
>NZ_CP018388.1|WP_038793455.1|341609_343268_+|GMC-family-oxidoreductase
MKQQSYDYDYVVVGSGFGGSVSALRLSEKGYRVLVIEQGRRWTPENLPESTWNLSRWQWRPALGLRGFFSMRFFRHVVVLHGNAVGGGSITYANTLLVPPDKVWREGTWAGLEDWERVMPAHYATAKRMLGVVTNRRMDAADFRLKDMAKLIGVEKSFYPTEVGVFFGDDADAPGTRYADPYFGGAGPERTSCIGCGGCMVGCRHGAKNTLDRNYLYLAERLGAQVREQTKVVDVRPLDARADGAAGYAVEAVSLAAGARGAKSRLTCRGVVFAASSLGTQDLLMRLKEKGSLPRLSDALGKRVRTNAESLIGVRFPKSRVDLSKGVAIGSGIYIDEHTHIEATRYPSGSDTMGLLTTVLTRGAPGGLRVLVWLGALAKLVLTRPLSAWRMIDPRGFARETMIFLCMQTLEGHLTMRLKRRWFWPFSKQLATSGAKIPAYIPAANDFAQKAARALGGVPMTSLTEILLNVPMTAHCMGGAAMARDARDGVCDGRSRVFGYRNMYVCDGSVLGANLGVNPSLTITALAEHAMSHVPAAREQRWDSTAETLVAA
>NZ_CP018388.1|WP_076804964.1|340878_341310_+|hypothetical-protein
MHQERRKRNADRHGTHQYDADSRAAPREAPRFEHEPKKQRDAAQHEVDRDRAAREIRERIEHKARPDVRRAERPISQDVAQAPIGAAGAISPSTAHSIFLEIGLALAGRPIQVRRNRAPFTHGTPRRRPARGPTARTASPAPV
>NZ_CP018388.1|WP_004523291.1|339768_340704_+|LysR-family-transcriptional-regulator
MIQNLRQLDLNLLLVFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEPVRQALYLLQIGLGPQADFEPDTHHLFKLSMNDYGQTVLLPDLLAHIKSRAPNVMLSVQSDDAGSIPAQLTTGTLDLAIDYLHFDNPELCYEPLHEEHLVVIGRAGHPAFAGGLALRGYEESGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSDLLGTIPRRLAERFADVYALQIAPLPIDIAPIQVSLIWHRQQDAQPGLRWLREQVVLTHRAIIGCDEHAPA
>NZ_CP018388.1|WP_009927403.1|339531_339642_-|hypothetical-protein
MQSTGSFDISARRMIEFRSVNKSNHDCPLEKSSGLL
>NZ_CP018388.1|WP_004200700.1|338355_339471_-|hypothetical-protein
MTQDVTVFRARYRASVHPRYNAWLHGGFVLAYGCAAIAFFLKDVARVSAVQWASVPAAFLLFNWLEFTVHRHVGHVKRRFGAMFYRRHTGDHHSFFANEQIAYREARDWRVILFPAWLIVVFSLGLFALHAVLGRFDANVAGLFASTMLGGYLLYECVHACEHLPDAHPLAKWPWIRQMRVLHRVHHRDALMRSCNFDVIWPLMDWLHGTLRWSEAPGADMSTRMRHEIDIACAGADVLAYASDASRWPEWHPSSLRVDGPAGSLAAGSRFDEDVRAAGRVDRLHWDVVRNEPGVMWQARAANTAGSLRILLTYECSGGPRGARFVRTLHYHSPNPLLRLANALVMRGRVERESAYSLTLLKRRLEAARDA
>NZ_CP018388.1|WP_004196898.1|337613_338054_+|SRPBCC-family-protein
MKQQRIEIAEEFDAPVHQVFRFFSEHENLKSIFSPAKIRRISDGEPARNGVGSAREMRVPGAPPFVETVTAYQENELIEYRITRGSPLRDHLGVMRFVPIDERRTYFHYVITFEGKVPFVAPVVRHVLEGSIRRGLGKVATRRLWG
>NZ_CP018388.1|WP_009950893.1|337222_337528_-|hypothetical-protein
MRHDSRLRCTRDDDDIDQCHRQSGRSPLDAEPNRGCAARRLRASGGRRPRGANTEPRRRKPHARVIRQRSWRAARTRPCRRFSAACGRFGQAMARRARPPA
>NZ_CP018388.1|WP_154233013.1|336942_337218_-|hypothetical-protein
MRIAEALCARIVETRVDASAARSLPGSGAVTTARASADISGLVRVAEAGGALSGARIEFMGESGAGGTPRAAKACRFGIRTISRVRAVSLS
>NZ_CP018388.1|WP_004545438.1|347768_349040_+|polyhydroxyalkanoate-depolymerase
MLYAWLEAQREFFRACQPWAGAAQRAGAGAGARPAGWPTWGPMARAADAVPAPPPFAIASIEIDGAAVPVDECVVDDTPFCALRKFSRRLRGDAAARPAVFLCTPLAGHHAVMLRETVETILATRDVYVTDWRNARDVPLEAGAFGLDDYVCTLERFVAGAAGDGLHMMAVCQATVPALAAVALLAARDVHVTSVALLGGPVDTRSHPTLIDRFALEHDLDWFRRTAIDIVPPPYAGAGRRVYPGFIQHAAIIVAHPQRRASLESRYWAAWMTGDFAAAARCLREMNEYGAVLDMTERYFLDTIRVIFHERLLAQGRWSIGRRLVAPRRLTRTALCTIEGGRDDIAGAGQTHAAHALCDAVPDAVRERITEPDCDHYDLFLGPRWRRTIHPALDAFWTRAEAARAAAGEPRPTAERAERRIAH
>NZ_CP018388.1|WP_085503095.1|349300_351085_+|ribonucleotide-reductase-like-protein
MIGDMDDQPICDAVFADRYALPGEHSRAQACARVARALALAEPMATRSGAARRFYRNLLNGAFGAGRIMARAGAAPDQTMASCFVHPIRAPAALTRFHPNLDEALDEARLALAMGADIGYDFSAIPPAGARPDADHPDSPGVCAALDRFDRIGTQAGERDGRRRAQLAVLRCDHPDLLAFAAAKHRHAGRHARWTTLELAVAATDAFMQAVEQDLPWTLRHTAPPRDAPGGALPGADGAWTYASVPARHVWREIVSAARDGAGPGLVFVDAIDAADPLRGRERIDATSPCGAQPLPPYGSAMLGAIDLSRFVRNPFGAGGEPRFDFAAFDTAVRIEVRLLDNALDVTRWPLAAHARESYQKRRIGVGVTGLADMLAMMRLRYDSPAAREMARYIASDLRNHAYAASAELAAERGAYPLCDRHAHLDALRAGPPLPHAVCHAIERDGLRHSHLTSFAPVIGVSLAFGDHCSPGIEPARAWIEHRPVRAGAAGAPGMRAENHAHRLFRSLRGERAALPDYFATDADVAPGERLAMRVALQPYVDAGIDNTLTLANHYSLEEVNALLFAAWRAKLKSVAIRRADLARDAQPSDDDGV
>NZ_CP018388.1|WP_004532595.1|351159_352971_+|bifunctional-aminoglycoside-phosphotransferase/ATP-binding-protein
MTTGAVAARRLPRRGTARGRRAPSRAFTIHGGDEMRRSRPPKPAKPAAVRRRPHGAARAHAIRGNGPQRRAVRERAARRLSRDIDAALRRASTYPHPAGPIVRIETHLSVVYLVGRFAYKRLKPFDFGFANFSELAARRRACEAELALNRPLAAPIYLAAGPLVRRARGLRLFGAGAAVDHVVRMRRFDERMLFSRLLARGALDAADIDAAATRLAAYHLHAPRDIPRRAYGSARELRRQLDDMLAPLERALGAALPASLRAWCVRRCDELAAHLDARRADGYVRACHGDLHLNNVVKRGRDALMFDCIDFDDALRWIDVINDLSFLLMDLHAHDRAALAHRLLNRWLDETGDFAGLAALPLYVAYRALVRALVATMRAGGDAAARAARIERARRYVDVAAHAARARRPCLLLCHGYSGSGKSVASRALADVSGAIRLSSDSERKRARPFAAVDARPLPASAYTPQQIDAQYERLRALARDVLRAGYTALVDATFLSHARRARFFALARELGVPVYVLDFHASRACLERRVDARAAARDDHSDAGAAVLATQRASADPLDADERARTIGFDTDVPLATLRSAGYWRPVLDALDAARVDAQATR
>NZ_CP018388.1|WP_085514812.1|352987_353449_+|quinone-oxidoreductase
MRNRCRDTSRQRGPRRPRRRPFARGHLAAPLRSLAHSLSATPRHAMPCHAAPHRTAPHRNATQRNGNGDGDGDGNDDRTPPPAGSARAARRADSRANRTRSRAHARRAGEIRRSRGPRRNGRRPRERRPNARSTHRPSAVDLGQSAPAGRSID
>NZ_CP018388.1|WP_004523279.1|353546_354578_+|hypothetical-protein
METSPLKTTTPEAIPPFDPSASVEDKLRLAIHYAILAPSSHNTQPWRFMVGDGSVMLCADRLRALSVVDPYDRELLISCGAALLNLRVALSRFGFAYVIDMFPSPSDPDVIALVRLDPHGYHDESLVPLFDAILERVTTRTPYANEAVPCDVQRALVDAGAAEGAEIACVDAPHALDEIAELIADADRLQFADPRFRRELANWVHPRRHDDGMPAFAAGVPALLDFATPVVASAIRTFDLGGGLAAMHHKLVDGSPLIVGISTASDDRDAWVAAGQALERVLLVAAAAGLTASYLNQPIEIDALRERLRPLLHVDAHPQLLLRIGRGPVVAHAPRRPLMDVVS
>NZ_CP018388.1|WP_044490955.1|354574_356392_+|STAS-domain-containing-protein
MTERERAARGRNDARRGGGDSGGDDEAWRRWLPGIATLRTYRRAWLARDLYAGVALTAVLVPVGMSYAQAAGLPVIAGLNASIAALVGYAIFGPSRILVLGPDSALAALIAGAIAPLAHGEPAHAVALAAALALMSGGFCVLAGLLKLGFVTDLLSKPIQYGYLNGLALTLIASQLPSLLGTVPLGGTFVDQVASLAATVAQGRIDFASLALGGGCLAGIALLRRVAPAWPGMLIAVAGASIVAAWLGAAPDAGGAHAHVAYAHVALVGSLAGTLPPLGLPSISLADASRLIAGALAIAMVSVADISVLSHVFAQHDGSETDRNQELCALGAANLLAGMLRGCAVSSSASRTPVALAAGARTQLTSLVAAACIALLLVAPTLLARVPLAALAAVVVYSANALVDVRAIVRLYRVRRGECAVSVLCFAGVVLLGVVPGILLAVGLSLLSFVWRAWHPYDAVLGRVEGMHGYHDVSRHPGAALTRGLVAFRWDAPLFHANATIFRDHVRDAIAEAGAPVRCVVIAAEPITDVDVTAADMLATLRDELAARRIALVFAEMKGPVKDRLRTYGLFEKIGADHFFPTVTDAIEHFTRMRKDVATARRARR
>NZ_CP018388.1|WP_004530663.1|356863_357313_-|CBS-domain-containing-protein
MNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIVLSLIAKDVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMRLTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASISRRQIHFEEKARD
>NZ_CP018388.1|WP_004529498.1|358487_358922_-|Hsp20/alpha-crystallin-family-protein
MSNVTRYDPFSLEPVSDLFQGLFRPLRGIADADDEKLASMKIDVTENDQAYAVKAELPGVDKNDINVQIDGNTVSISAKVERNKELKEGERVIRRERYSGEFARTFSLANELDRDAASAQYQDGVLSLTLPKKASSEKKKLTIG
>NZ_CP018388.1|WP_011204702.1|359284_360412_-|porin
MNAKSIAAAALAVAQAGLAHAQSSVTLYGALDAGVLWQNTSAASFSPTAPNTGAVVRFKDGGVYSSLWGIKGTEDLGGGYRVNFRLQGAFDGGTGKFGLSDAPGAVAAFNQIATLGVSGPFGTFNAGRQIVPMIYAMADTDVRAARFFGSVLTAWLGLNTAAGWPGNSTNAPIGALYDSDALVYQSPAFGGASLALEYAPGGVPGGVQRGARASIVLKYASNALNLAAVYYNGHDTNPAPGASATGLDNNRFVYVGAQYKLKDVAVSASYGNGRNPARGDRVNLDMFAFGLGYRVSPFFRVSSGVYYLKDRNRSANRSTSIVLGADYELSKHTTLYAQGGRVDNRGTMAQMLAYGQPVAPGLATTAAMLGMRHSF
>NZ_CP018388.1|WP_004188381.1|360491_362297_-|fatty-acid--CoA-ligase
MHATDQHSALNAAPSAYVYPLLVGQLLTHARGADAGRQIVYRGDVRHSYAQFRERIGRLAGALAALGVGADATVAVMDWDSHRYLESYFAIPMMGATLFTVNVRLSPRQIAHTLRDARASVVVAHADFLPLLEQVRDALGDSTCVIVACDGGAMPATSLPLAGEYERLVAAADPDYPFADFDENARAVLFYTTGTTGDPKGVCYSHRQIVLHALATAAALGAARDGQRLHRDDVYMPITPMFHVMAWGMPYIAVMLGLKIVLPGRYRAHALLDLRQAERVTFSHCVPAVLQMLLDEARLRACDLSGWKMIVGGSALPASLCRAARARRIDVFAGYGMSETGPVVALAQLRGTEGGVDVHADEDAGIDADVGAGIDVDTDVDADINANAGANASDSSVTTAAAHADDETAKRCAAGWPPPLVELRVVDAAMRDVPRDGRTPGEIVLRGPALALGYRGNPQASAALWAGGYLHTQDVAVMHGDGAIRIVDRIKDVIKTGGEWVSSLELEGLLNDIAGIRESAVVGVPDARWGERPAAVVVCERDAPLAAQDVRARLLEHVAANRISRYAVPECERIVFVDALPKTSVGKIDKKSLRRLVERID

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Crispr_ID: NZ_CP018388_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018388_2

3101226-3101318

Orphan

Consensus_repeat	Method
GCGCGTCGGCGCGCGCGGCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018388_2

>merge|NZ_CP018388|2|3101226-3101318|CRISPRCasFinder
GCGCGTCGGCGCGCGCGGCGGCGATCAGCCGCTCGCGCTCGGCGGCGGCCTGCGCGAGCGCGTCCTTCAGCGCGTCGTCGCGCGCGGCGGCGA

>NZ_CP018388|2|2|3101226-3101318|CRISPRCasFinder
GCGCGTCGGCGCGCGCGGCGGCGA	TCAGCCGCTCGCGCTCGGCGGCGGCCTGCGCGAGCGCGTCCTTCA
GCGCGTCGTCGCGCGCGGCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018388.1\|WP_004524993.1\|3089963_3091088_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_CP018388.1\|WP_004524985.1\|3102479_3102788_-\|membrane-protein	unknown	unknown	gnl\|CDD\|274462
NZ_CP018388.1\|WP_071811430.1\|3091237_3093073_+\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP018388.1\|WP_004524989.1\|3095564_3096074_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018388.1\|WP_004533337.1\|3097938_3098787_-\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|376304
NZ_CP018388.1\|WP_085503031.1\|3107465_3108896_+\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|236180
NZ_CP018388.1\|WP_004529178.1\|3096694_3097720_-\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257
NZ_CP018388.1\|WP_004187193.1\|3101536_3101785_-\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|184067
NZ_CP018388.1\|WP_004529184.1\|3108892_3110071_+\|acetate/propionate-family-kinase	unknown	unknown	gnl\|CDD\|235922
NZ_CP018388.1\|WP_046191694.1\|3096131_3096635_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018388.1\|WP_004548632.1\|3105688_3107482_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|213656
NZ_CP018388.1\|WP_004524990.1\|3093458_3095024_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185008
NZ_CP018388.1\|WP_004187346.1\|3101781_3102483_-\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|237383
NZ_CP018388.1\|WP_045597581.1\|3086700_3089961_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP018388.1\|WP_011204277.1\|3110375_3110546_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018388.1\|WP_004524981.1\|3105299_3105557_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018388.1\|WP_011853763.1\|3103723_3105328_-\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|183615
NZ_CP018388.1\|WP_004188221.1\|3103278_3103734_-\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|184057
NZ_CP018388.1\|WP_004524995.1\|3085630_3086704_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP018388.1\|WP_058040623.1\|3098783_3100790_-\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183987

Protein	Function_ID	Function_description	E-value
NZ_CP018388.1\|WP_004524993.1\|3089963_3091088_+\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	3.93708e-26
NZ_CP018388.1\|WP_004529184.1\|3108892_3110071_+\|acetate/propionate-family-kinase	gnl\|CDD\|235922	PRK07058, PRK07058, acetate/propionate family kinase.	0
NZ_CP018388.1\|WP_071811430.1\|3091237_3093073_+\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	5.65725e-132
NZ_CP018388.1\|WP_004548632.1\|3105688_3107482_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|213656	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.95969e-179
NZ_CP018388.1\|WP_004533337.1\|3097938_3098787_-\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|376304	pfam00231, ATP-synt, ATP synthase.	4.46992e-34
NZ_CP018388.1\|WP_085503031.1\|3107465_3108896_+\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	gnl\|CDD\|236180	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated.	0
NZ_CP018388.1\|WP_004529178.1\|3096694_3097720_-\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP018388.1\|WP_004187193.1\|3101536_3101785_-\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|184067	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional.	4.45015e-37
NZ_CP018388.1\|WP_004524985.1\|3102479_3102788_-\|membrane-protein	gnl\|CDD\|274462	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2. Members of this protein family are uncharacterized, highly hydrophobic proteins encoded in the middle of apparent F1/F0 ATPase operons. We note, however, that this protein is both broadly and sparsely distributed. It is found in about only about two percent of microbial genomes sequenced, with the first ten examples found coming from the Euryarchaeota, Chlorobia, Betaproteobacteria, Deltaproteobacteria, and Planctomycetes. In most of these species, surrounding operon appears to represent a second F1/F0 ATPase system, and the member proteins belong to subfamilies with the same phylogenetic distribution as the current protein family.	4.12229e-10
NZ_CP018388.1\|WP_004524990.1\|3093458_3095024_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	2.47951e-79
NZ_CP018388.1\|WP_004187346.1\|3101781_3102483_-\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|237383	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional.	1.54059e-122
NZ_CP018388.1\|WP_045597581.1\|3086700_3089961_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.7979e-92
NZ_CP018388.1\|WP_011853763.1\|3103723_3105328_-\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|183615	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional.	0
NZ_CP018388.1\|WP_004188221.1\|3103278_3103734_-\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|184057	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional.	4.44077e-63
NZ_CP018388.1\|WP_004524995.1\|3085630_3086704_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	1.83012e-39
NZ_CP018388.1\|WP_058040623.1\|3098783_3100790_-\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|183987	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional.	0

>NZ_CP018388.1|WP_058040623.1|3098783_3100790_-|F0F1-ATP-synthase-subunit-alpha
MTPTPDAPAAAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAPAACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAALGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYAQFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDARIAALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAFGGEQARGDADRDADHGANREVSPEASREVSREVSREVSHEANRDAAADAARVAGRAPGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGDAARTAPSPQGGADANVNADANVDAEAEARHKR
>NZ_CP018388.1|WP_004533337.1|3097938_3098787_-|F0F1-ATP-synthase-subunit-gamma
MSDKLAAIEARTDTARQLQTVIGAMQGVAAARAHEAQQRLPGIRASAATVGAAIGDALSAGARSGDTAAGARAAPRARLVVVLCSEQGFVGAYNAQLIEHATRPEPSVSREYMMVGSRGAMLADAGGVPLVWRTPMAARADDVVHLANRITDALYAHLAKRGAQPVSIVHAMPGGAARLEVTERRLLPFDYARFDTAPRAQPPLVHLPPATLLAELAQAYVFVELCEAAMLAFAAENEARTRAMIAARESVERALGDLLQAYRIARQDEITADIVELAASGL
>NZ_CP018388.1|WP_004529178.1|3096694_3097720_-|alcohol-dehydrogenase-AdhP
MAQYMKAAVVHAFGEPLRIEEVPVPTPGAGQILVNVKASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGFVAAVGEGVRHVKEGDRVGVPWLYTACGHCEYCQTGWETLCHEQQNTGYSVNGSYAEYVLADPNYVGHLPSNVAFDEIAPILCAGVTVYKGIRVTDTRPGQWIAISGIGGLGHVAVQYAKAMGLHVVAVDVAPQKLELARKLGAAFVVDASKDDPAAVIQKEIGGVHGVLVTAVSRGAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESLDFAAEGLVRAHIHRDKLEHINGVFSALREGKVDGRIVLTGQ
>NZ_CP018388.1|WP_046191694.1|3096131_3096635_-|hypothetical-protein
MRGAGRASPSRARRYENVSKEPNTHREAGAPVHRYRLQVRNMNGECRTYELRLSSLDDGYTLEIDEWLNFPDMHLGDVTPVHVSRPVQFAVPAHEFYRRRRAFRTELIESVAAALRAGEVVRMRDSPDEYSGGHAGNPWVNWIRADLRANPGGRPPPVGDDMQDLIH
>NZ_CP018388.1|WP_004524989.1|3095564_3096074_+|hypothetical-protein
MRRIYFLLPDADTARAIVDELLLKRIEWRHIHVVANDRVPLENLPEASIAQSSDLLPALARGTAAGGVTGALAGLAAIAFPPAGLTIAGGAVVAFAIAGAGFGAWVGTMIGVSVPNTRLKHFEDAVDNGELLMMIDVHRDRVEEIEALVKQHHPNAHLEGTDPTIPAFP
>NZ_CP018388.1|WP_004524990.1|3093458_3095024_-|methyl-accepting-chemotaxis-protein
MPTLSFRQKLWLPLVISLIALLLVSISSAWLSYQTRMEERRNDLTNVAHVGLSIVREYAALAQRGVLTDAQARKEALERLRSVRYGSDGYFIVIDSSPRMIMHPIKPDTVGKDLRHVADADGRHHYLTFASVAQSPQGGFVDYVFAHPNAHPAKAVDKLGYVIRYAPWDWIISTGAYIDDIQAAFAKSLCLSAGVFALLAALLALSVVYTNRGIERMIGGDPRIAAHMAGVIASGDLATPFATRREDRSSLMFAISQMRDALANAVAQIRASAGYVATTAGEIADSNMDLSSHTECQATALQQAASSMQRLTERVRDTADRARAASELAGSAARITDRGGDMVVRVVAAMNDIRAESRKMVDIIGVIEGIAFQTNILALNAAVEAARAGNEGRGFAVVASEVRVLAQRSASAAKDIRALIGRAAERVGNGAELVEATGATIGEAQHAICRVTGIVQDIAAAATDQSQGLEQINAAVSQMDSVTRRNATLVEHAAIAAQSLNEQSRCLQDAVAAFRTEALGC
>NZ_CP018388.1|WP_071811430.1|3091237_3093073_+|response-regulator
MHVEVFAQHSSCPGWHGEMARRIRAFDWSATELGPLERWPASLVAAVRTVLASPVPLVMLWGASGYMLYNDAYAAFAGGRHPYLLGQPVELGWPEVADFNRNVMRTCLAGGALSYRDKALVLLRNGRPEEVWMDLYYSPLAGDDGAPAGVLAVVVETTERVLAARHRDRAKAALHETNAELRRLTETLEQRVADAITERASIEEQLRQAQKMEAIGSLTGGIAHDFNNVLQVVSSNLQMLSAELGEDARAQRRIASAANAVARGAQLASHLLAFARRQPLAPAVLEPRGLIDGMREMLHRALGESVHVDADLRDDVWNVLADRHQFENALLNLAINARDAMRGEGTLKITACNIVLDAGRHARRNGLPPGEYVAFDIADNGVGMTPDILERVFEPFFTTKPDGQGTGLGLSMVFGFVKQSGGHTSIESAPGRGTTVRLLLPRCREAPAGEPAAQRRLPAEGGRETILVVEDDADVRLAVVDMLAQLGYKVITASDGEAGLLALESGAPIDLLFTDVIMPGRIKGGELARRAAQRVPPVPVLFTSGYTRDEIFHAGRLDPGVMLLGKPYRRDELAHKVRSVLDAHASARRARGARHAQADPRAKTAAARVQR
>NZ_CP018388.1|WP_004524993.1|3089963_3091088_+|ABC-transporter-permease
MRRLAIVYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDASPLSARIASAFFPPQFALPRMVTLAEADRGMDAGDFTFALDIPPNFQRDVLAGRPAQIQLNVDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVDIAMHMRFNPNLDQTWFGSLMEVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSLAFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQLLSGSLTPRESMPFAVQNIMLAAPTTHFVEIGQAILYRGAGIETVWRQFLILAVIGTALFLLSLKRFRKTIGQMA
>NZ_CP018388.1|WP_045597581.1|3086700_3089961_+|ATP-binding-cassette-domain-containing-protein
MSAPSVVRFSDVSLRYGKTVALERITLEIPAGLTIGLIGPDGVGKSSLLALAAGARALQTGAVDALGGDMRSRRHRERVCRRIAYMPQGLGKNLYPTLSVEENLQFFARLFGHDADERRRRIDALTRSTGLFAFLSRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDLIARIRSERPAMSVIVATAYMDEAQRFDWLIAMDAGRVLATGAPAELLARTGCDSLEAAFIALLPEDERRGHKPVTLEPLRADAQTGTAIEARGLTMRFGDFTAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPATEGTAQLFGKTVDPKDINTRRRVGYMSQAFSLYSELTVRQNLVLHARLFGVPAAEIDARVDEMARRFGLADIYDMLPDSLPLGMRQRLSLAVAMVHKPELLILDEPTSGVDPVARDSFWQLMIDLARRDRVTIFISTHFMNEAQRCDRISLMHAGRVLASDAPAALVRARGAATLEEAFIGYLVDASAQEAQGGAGGRPGAGERAAGESLAGRGAATDGDADGAHARPAAYANGAAQHRAPDADAAGTDVAAETGARDDARTAHAAGHSAGNDVRATVGSEVGSEVGSEVGSDVGSDVASEAGPEAGLAASAESGAERAREPAADITADAGAAIDVEPGASAESATAAVAPARHAESAATSPRAGNAPAGTPFAAAPPSHAAPAEPPHRAFSAQRALSYMWREMLELRRDPVRATLALIGSLVLMCVIGIGISLDVEDLTYAVLDRDQTELSHDYALNLSGSRYFVERPPIADYAALDRRMRDGELSLAIEIPPNFARDVERGAPAQIGMWIDGAMPQRAETIRGYAIGMHTMWLADKARHRLGVTLAPRAEVVTRYRYNPDVKSLPAMIPAVMPLLLLMLPAMLTALAVVRERELGSILNLYVTPVTRTEFLIGKQVPYVVLAMLNFLLMTMLARIAFDVPVKGSFMTLLLAVLIFNVVATGIGLLASTFTRSQVAAIVMTIIGTMIPTVQFAGLLTPLSSLEGTGRLIGLVYPATYMLSISRGVFNKALSLHDLYSQFWPLAASVPVILGATILLLKKQER
>NZ_CP018388.1|WP_004524995.1|3085630_3086704_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MIQVTRKQIVAAAAVVVVALGAYYGWTLLRHQGPGDGFASGNGRIEATEIDVATKLPGRIDAILVDEGDFVKAGQPLANMQIQVLRAQYDEATAQRQRALNTAAGVQSQVAQRKSDKAAAQAMVVLRESELDAAERRLARSQTLSREGASSLQELDDDRARARSAQAAVSAAAAQVAAAQAAIEATEAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQYRVAQPGEVLPAGGKVLNLVDLSDVYMTFFLPETVVGRVALGADARIILDAAPNYVIPATVSFVSSTAQFTPKTVETANERQKLMFRVKARIDRELLQKHLKLVKTGLPGVAWVRVDPSKPWPAQLMVKVPQ
>NZ_CP018388.1|WP_004187193.1|3101536_3101785_-|F0F1-ATP-synthase-subunit-C
MNNLIEVVSIAAAALAVSFGAIGPALAEGRAVGAAMDAIARQPDASGTVSRTLFVGLAMIETMAIYCLVVALLLLFANPFVK
>NZ_CP018388.1|WP_004187346.1|3101781_3102483_-|F0F1-ATP-synthase-subunit-A
MNASPLSTVPLFSVGPVGISAPVLATWAIMAVLVALALVARRRLSVDAPSRLQSVLELFVATVDAQIADTMQTPPARYRALIGTIFVLVFCANGASLVPGVEPPTAHLETDAALALVVLAATLYYGVRARGVRGYLATFAEPTWVMIPLNVVEQLTRTFSLIVRLFGNVMSGVFVIGIVLSLAGLFVPIPLMALDLLTGTVQAYIFMVLSMVFIGAAVSGDETSAPRRGQENT
>NZ_CP018388.1|WP_004524985.1|3102479_3102788_-|membrane-protein
MIEMWETARASFDGIAAAIGLALGFVAGACHFVSLGWNSRLFVAGRAGVALALQLARVALAVAVLVVLARAGFGMLVAGSAGFFAARAIAVRRAAALTGARR
>NZ_CP018388.1|WP_004188221.1|3103278_3103734_-|F0F1-ATP-synthase-subunit-epsilon
MGAELRVTIATPARVCVDDLPIVSLRAEDASGAFGIRAGHVDFVTLLRASVVRWRTADGATHYAALDGGVLRVTRGARIEIACRDAVLGESLAELEAVVRGVRATQLDEKRRARVDETRLHAQAVRRLLTYLRPEHAKDGVHAPLKPETLE
>NZ_CP018388.1|WP_011853763.1|3103723_3105328_-|F0F1-ATP-synthase-subunit-beta
MADPQATNGTGAACAERDASDVGDVSDVGDARDEGAGRVVAVRGAVVDVAFDGGALPALNEALTIPVDGAAPILAEVHAHLSDAAVRALALGPTGGLRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGISVFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERIASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDVIALLGIDELGADDRRLVGRARRLQRFLTQPFAVTEAFTGQAGASVEIADTIAGCRAILRGDCDDWRESSLYMVGTLDDARRKEAAAREADARREAAAAASGAGPGTTSDPASGSAEPQGARHGR
>NZ_CP018388.1|WP_004524981.1|3105299_3105557_+|hypothetical-protein
MPFVACGSATVAPVWLVRRWLHHNGARRPPADLGQETGNRQTKRGIAQSETIDASASGADTVRAASIVDSNQIPQTYAWLQWPCQ
>NZ_CP018388.1|WP_004548632.1|3105688_3107482_+|alpha/beta-fold-hydrolase
MDTRHAPESGAPDAPLPAHPPASYAPESPYRIFDLAKEASVAKLTSGLSPASLQLALADWLIHLAAAPGKRAELATLALRHAALLGQYLLEAATGRTPAAPAQPSPGDRRFRAGAWQLEPYRFWHQSFLLAEQWWRAATRDVPGVSPHHEDVVAFSARQMLDTFAPANYVATNPEIAQRTALTGGANLAQGVWNYLDDVRRLITKQPPAGAEQFELGRNLATTPGRVVFRNHLIELLQYSPTTPDVYAQPVLIVPAWIMKYYILDLSAHNSLIRYLVGEGHTVFCISWRNVDASDRDLSLDDYRKLGVMDALDTIGAIVPGEKIHATGYCLGGTLLSIAAAAMANTGDDRLASVTLLAAQTDFAEPGELQLFIDDSEIHFLESMMWERGYLGAHQMAGSFQLLMSNDLIWSRVIHDYLLGERTPMIDLMAWNADSTRMPYRMHSEYLRHLFLDNDLATNRYVIDGQTVSVHNIRAPFFVVGTEHDHIAPWRSVYKIHYLSGSDVTFVLTAGGHNAGIVSEPGHAKRHYRMKMTAAAAPSISPDEWLAGATDFEGSWWPAWHAWLARHSSPQRVAPPPLGKPGAHTLGDAPGTYVFQK
>NZ_CP018388.1|WP_085503031.1|3107465_3108896_+|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase
MCSRNRECRVDREILQNRPFDSLAIGDSASLVRTASRDDIDLFAAMSGDVNPAHLDAAFAAHDLFGHVVVHGMWTGALVSAVLGTKLPGPGTIYLDQTLEFRHPVAPGDTITATVTVAEKRPEKRIVLLDTRCTNQDGHVVLRGTATVIAPDTPITWERVPGPEVAVRRHDRYETFVRDAREQPPLRTAIVHPCSPDALRAAIDARDANLIEPILIGPQAKIRAIADAAGVDLAGVPIEAVEHSHAAAARAVEMGGAGEVAALMKGSLHTDELLAAVIGPASRLRTERRISHVYAMDVPAYPKPLLITDAAINIAPTLEQKRDICQNAVDLLHVLGVERPRVAVLAAVETVNPKMPSTLDAAALTVMAARGQIAGAIVDGPLAFDNAVSAVAAMSKGIASPVAGDADVLLVPDLEAGNMLAKQLMYFAGADAAGLVLGARLPIILTSRADSLRVRIASAALAKLVAERTRAGALAS
>NZ_CP018388.1|WP_004529184.1|3108892_3110071_+|acetate/propionate-family-kinase
MSEPLLLTFNAGSSTLKIGLYSVANGEPAPLGRGKIDFNRAPLQFEYANGGEAHAVPLAAPVTDDLHAVLDEALGWIDAHLSVHELVSVGHRVVHGGDTFDGPVRIDERTLDAIAALVPLAPLHQPQSVRLIRALRHLRPHLPQVASFDTAFHRTQSDLVRRFALPRALFDAGIKRYGFHGLSYRYVAGRLRERHPSIARGKVVAAHLGSGASLCALDAGVSRDTSMGFSTLDGIPMATRCGALDAGVVLHLQKTLGRTLDDVEQMLYHRSGLLGVSGVSGDARALLADPSAGARDALELFAFRIAGETARLAATLGGLDALVFTAGIGEHQPQTRAAVCERLRWLGVELDAHANARNAETVSRDGSRVAVLVVPTDEEQVIARDAASVLHA
>NZ_CP018388.1|WP_011204277.1|3110375_3110546_-|hypothetical-protein
MLVSRAHGPKLRRRRARARRQSPAAILPRDLLQLRPLRARPLSAPADAARVATDDR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

74719 : 130235

Trichoplusia_ni_ascovirus(14.29%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085504122.1\|74719_75814_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_004524887.1\|75971_77144_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_004529276.1\|77472_78333_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	7.1e-13	28.0
WP_009982064.1\|78334_79951_+	acyl-CoA carboxylase subunit beta	NA	NA	NA	NA
WP_004529278.1\|79963_81115_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_004524882.1\|81121_81964_+	enoyl-CoA hydratase	NA	NA	NA	NA
WP_085514796.1\|81960_83967_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_009969379.1\|84001_84886_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_085515004.1\|85248_86910_+	AMP-binding protein	A0A1V0SBX8	Catovirus	4.6e-32	25.2
WP_004524878.1\|88018_88930_+	fatty acid desaturase	NA	NA	NA	NA
WP_009927010.1\|88955_89240_+	acyl carrier protein	NA	NA	NA	NA
WP_004539278.1\|89252_90188_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_004544778.1\|90184_91225_+	acyl-CoA desaturase	NA	NA	NA	NA
WP_004529287.1\|91265_92291_+	amidohydrolase	NA	NA	NA	NA
WP_085514797.1\|92287_94141_+	fatty acyl-AMP ligase	NA	NA	NA	NA
WP_004529289.1\|94154_94574_+	PaaI family thioesterase	NA	NA	NA	NA
WP_011205721.1\|94646_95552_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_004540486.1\|96021_96618_+	GDP-mannose pyrophosphatase NudK	NA	NA	NA	NA
WP_004529292.1\|96854_97583_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	8.4e-23	31.7
WP_038802333.1\|98786_99907_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-49	39.5
WP_009969387.1\|99937_100312_-	DUF746 domain-containing protein	NA	NA	NA	NA
WP_085515005.1\|100530_102300_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_009941131.1\|102811_103141_-	hypothetical protein	NA	NA	NA	NA
WP_085514798.1\|103147_112459_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_071811406.1\|112610_112808_-	hypothetical protein	NA	NA	NA	NA
WP_004533385.1\|112808_113072_-	hypothetical protein	NA	NA	NA	NA
WP_080003471.1\|113663_118295_-	type IV secretion protein Rhs	A0A2H4JFP5	uncultured_Caudovirales_phage	8.3e-23	34.9
WP_004524859.1\|118308_119577_-	hypothetical protein	NA	NA	NA	NA
WP_157130508.1\|119592_121473_-	hypothetical protein	NA	NA	NA	NA
WP_004203275.1\|121488_123693_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.6e-46	29.9
WP_004533146.1\|123689_126356_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	5.2e-78	30.6
WP_004537556.1\|126368_127814_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004524812.1\|127810_129682_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_009935240.1\|129686_130235_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_2

981087 : 1003731

Burkholderia_virus(30.77%)

integrase,transposase

attL 980591:980609|attR 988348:988366

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
980591:980609	attL	NA	NA	NA	NA
WP_009967711.1\|981087_982368_+\|integrase	putative integrase	NA	NA	NA	NA
WP_025249783.1\|982588_984223_-	TIGR02391 family protein	NA	NA	NA	NA
WP_009967713.1\|984215_985265_-	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	3.0e-53	39.8
WP_009935582.1\|985442_985724_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_157130511.1\|985883_987003_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-49	39.5
WP_017882403.1\|987125_987533_+	DNA mismatch endonuclease Vsr	E5E3X5	Burkholderia_phage	9.1e-35	53.3
WP_080003473.1\|989034_989664_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.4e-27	38.1
988348:988366	attR	NA	NA	NA	NA
WP_085504666.1\|989671_991234_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.6e-149	53.5
WP_017335489.1\|991263_991611_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.2e-40	72.9
WP_009982080.1\|991607_992015_-\|transposase	transposase	B6DZU5	Stx2-converting_phage	1.0e-14	37.2
WP_004542548.1\|992665_993247_+	hypothetical protein	A9YX38	Burkholderia_phage	2.2e-21	100.0
WP_009967718.1\|993492_993759_+	hypothetical protein	Q8W6Q4	Burkholderia_virus	3.6e-40	95.2
WP_004552390.1\|993743_993965_-	hypothetical protein	NA	NA	NA	NA
WP_004557715.1\|993991_994099_-	hypothetical protein	Q6JIH6	Burkholderia_virus	8.2e-12	97.1
WP_009923452.1\|994100_994232_-	bacteriophage protein Gp48	Q8W6Q2	Burkholderia_virus	2.6e-15	97.7
WP_004537565.1\|994241_994517_-	bacteriophage protein Gp49	Q6JIH4	Burkholderia_virus	5.2e-42	95.6
WP_004547086.1\|995135_995357_+	BrnT family toxin	NA	NA	NA	NA
WP_004525420.1\|995340_995625_+	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	1.4e-10	50.0
WP_085504122.1\|996028_997123_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_085514864.1\|998627_1000088_+	serine/threonine protein phosphatase	NA	NA	NA	NA
WP_085504453.1\|1000138_1001509_+	c-type cytochrome	NA	NA	NA	NA
WP_009967729.1\|1001665_1002598_+	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA
WP_157130512.1\|1003041_1003731_+\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1149419 : 1221150

Vibrio_phage(25.0%)

holin,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004525541.1\|1149419_1150187_-\|holin	phosphocholine cytidylyltransferase family protein	NA	NA	NA	NA
WP_004206084.1\|1150225_1151227_-	HpnL family protein	NA	NA	NA	NA
WP_009969809.1\|1151223_1151997_-	2OG-Fe(II) oxygenase	NA	NA	NA	NA
WP_009969808.1\|1151993_1152689_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_009969807.1\|1153053_1154568_+	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_076853326.1\|1154537_1154870_-	hypothetical protein	NA	NA	NA	NA
WP_004525545.1\|1156277_1157216_+	hypothetical protein	NA	NA	NA	NA
WP_004202234.1\|1157249_1157798_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004530038.1\|1157794_1159306_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004530039.1\|1159449_1159977_+	hypothetical protein	NA	NA	NA	NA
WP_004190879.1\|1160056_1160488_+	GPW/gp25 family protein	NA	NA	NA	NA
WP_004196180.1\|1160501_1162364_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004190851.1\|1162360_1163350_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004525547.1\|1163352_1166223_+	type VI secretion system ATPase TssH	A0A2I7REQ1	Vibrio_phage	2.4e-60	27.2
WP_050868720.1\|1166213_1168505_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004190563.1\|1168670_1170959_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004547074.1\|1170962_1173179_+	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_004525550.1\|1173178_1174249_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_004190800.1\|1174251_1174968_+	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_004190606.1\|1175010_1175400_+	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_004202226.1\|1175405_1175999_+	hypothetical protein	NA	NA	NA	NA
WP_004525552.1\|1175995_1177357_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_076852928.1\|1177382_1179098_+	OmpA family protein	NA	NA	NA	NA
WP_004190265.1\|1179094_1182598_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004190863.1\|1182656_1183016_+	hypothetical protein	NA	NA	NA	NA
WP_004530792.1\|1183038_1183461_+	hypothetical protein	NA	NA	NA	NA
WP_004530793.1\|1183685_1184057_+	hypothetical protein	NA	NA	NA	NA
WP_009967872.1\|1184154_1184328_-	hypothetical protein	NA	NA	NA	NA
WP_004524288.1\|1184607_1185507_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_004199051.1\|1185581_1185710_+	hypothetical protein	NA	NA	NA	NA
WP_011857650.1\|1185717_1187037_+	glycosyltransferase	NA	NA	NA	NA
WP_045597683.1\|1187033_1188620_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_041220842.1\|1188884_1189880_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_038724161.1\|1190005_1190188_+	hypothetical protein	NA	NA	NA	NA
WP_004528656.1\|1190184_1191768_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_004545880.1\|1192494_1193748_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_009967873.1\|1194269_1195934_-	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	4.1e-57	31.6
WP_004546670.1\|1196066_1197632_-	glycoside hydrolase 68 family protein	NA	NA	NA	NA
WP_004530800.1\|1197820_1198837_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_004523135.1\|1199304_1200504_+	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	8.4e-12	27.2
WP_004198247.1\|1200681_1201707_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_009923708.1\|1201865_1202129_+	hypothetical protein	NA	NA	NA	NA
WP_004530801.1\|1202140_1203415_+	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	5.3e-105	54.1
WP_004186989.1\|1203487_1204459_+	membrane dipeptidase	NA	NA	NA	NA
WP_004186987.1\|1204609_1205143_+	4-vinyl reductase	NA	NA	NA	NA
WP_004523137.1\|1205203_1207267_+	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_004186901.1\|1207269_1209195_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_071811252.1\|1209199_1210372_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_004530055.1\|1210368_1211154_+	drug:proton antiporter	NA	NA	NA	NA
WP_004523139.1\|1211178_1212447_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_004530056.1\|1212467_1213613_+	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_004186918.1\|1213722_1214586_+	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004530057.1\|1214766_1216422_+	APC family permease	NA	NA	NA	NA
WP_004186920.1\|1216508_1217384_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_076809203.1\|1217527_1218427_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004186939.1\|1218562_1220116_+\|holin	choline-sulfatase	NA	NA	NA	NA
WP_004535106.1\|1220151_1221150_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA

DBSCAN-SWA_4

2529838 : 2558497

Agrobacterium_phage(33.33%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004530572.1\|2529838_2530300_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_028201330.1\|2530336_2532079_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_028201329.1\|2532066_2533089_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_085514965.1\|2533075_2536132_+	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	7.0e-79	29.6
WP_009968887.1\|2536158_2539182_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	7.1e-23	24.8
WP_009981800.1\|2539207_2541841_+	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_085504699.1\|2541858_2542923_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_038727444.1\|2542919_2543675_+	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_004200966.1\|2543703_2544096_+	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_004200965.1\|2544105_2544903_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004536933.1\|2544935_2546333_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_028201661.1\|2546329_2546995_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_085515032.1\|2547006_2550984_+	type VI secretion system protein ImpL	NA	NA	NA	NA
WP_157130524.1\|2551076_2551259_+	hypothetical protein	NA	NA	NA	NA
WP_085514966.1\|2551617_2553066_+	peptidase	NA	NA	NA	NA
WP_076841883.1\|2553025_2553271_-	hypothetical protein	NA	NA	NA	NA
WP_009940791.1\|2553229_2553523_+	hypothetical protein	NA	NA	NA	NA
WP_004528803.1\|2553527_2554160_+	GTP cyclohydrolase I	A0A0P0HSD2	Acinetobacter_phage	9.9e-20	30.6
WP_157130522.1\|2555092_2556076_-	hypothetical protein	NA	NA	NA	NA
WP_009949406.1\|2556046_2556349_+	hypothetical protein	NA	NA	NA	NA
WP_004551886.1\|2556782_2557226_-	hypothetical protein	NA	NA	NA	NA
WP_004557777.1\|2557310_2557598_-\|transposase	transposase	NA	NA	NA	NA
WP_085515033.1\|2557915_2558497_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018387

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018388

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection