CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018390	Burkholderia pseudomallei strain 2011756189 chromosome 2, complete sequence	2 crisprs	cas3,DinG,csa3,PD-DExK	0	0	4	0
NZ_CP018389	Burkholderia pseudomallei strain 2011756189 chromosome 1, complete sequence	1 crisprs	PD-DExK,csa3,DEDDh,cas3,WYL	0	2	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018390_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018390_1

2741737-2741829

Orphan

Consensus_repeat	Method
GCGCGTCGGCGCGCGCGGCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018390_1

>merge|NZ_CP018390|1|2741737-2741829|CRISPRCasFinder
GCGCGTCGGCGCGCGCGGCGGCGATCAGCCGCTCGCGCTCGGCGGCGGCCTGCGCGAGCGCGTCCTTCAGCGCGTCGTCGCGCGCGGCGGCGA

>NZ_CP018390|1|1|2741737-2741829|CRISPRCasFinder
GCGCGTCGGCGCGCGCGGCGGCGA	TCAGCCGCTCGCGCTCGGCGGCGGCCTGCGCGAGCGCGTCCTTCA
GCGCGTCGTCGCGCGCGGCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018390.1\|WP_085546911.1\|2744233_2745820_-\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|183615
NZ_CP018390.1\|WP_004548632.1\|2746180_2747974_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|213656
NZ_CP018390.1\|WP_085546910.1\|2743291_2743792_-\|AtpZ/AtpI-family-protein	unknown	unknown	gnl\|CDD\|378198
NZ_CP018390.1\|WP_004524989.1\|2736063_2736573_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018390.1\|WP_045597583.1\|2736630_2737134_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018390.1\|WP_071811430.1\|2731760_2733596_+\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP018390.1\|WP_085503031.1\|2747957_2749388_+\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|236180
NZ_CP018390.1\|WP_004524995.1\|2726153_2727227_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP018390.1\|WP_004524990.1\|2733957_2735523_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185008
NZ_CP018390.1\|WP_004188221.1\|2743788_2744244_-\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|184057
NZ_CP018390.1\|WP_085503033.1\|2749384_2750563_+\|acetate/propionate-family-kinase	unknown	unknown	gnl\|CDD\|235922
NZ_CP018390.1\|WP_004524981.1\|2745791_2746049_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018390.1\|WP_004187193.1\|2742047_2742296_-\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|184067
NZ_CP018390.1\|WP_004533337.1\|2738449_2739298_-\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|376304
NZ_CP018390.1\|WP_058040623.1\|2739294_2741301_-\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183987
NZ_CP018390.1\|WP_004552097.1\|2730486_2731611_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_CP018390.1\|WP_004524985.1\|2742990_2743299_-\|membrane-protein	unknown	unknown	gnl\|CDD\|274462
NZ_CP018390.1\|WP_085546909.1\|2727223_2730484_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP018390.1\|WP_004187346.1\|2742292_2742994_-\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|237383
NZ_CP018390.1\|WP_004529178.1\|2737193_2738219_-\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257

Protein	Function_ID	Function_description	E-value
NZ_CP018390.1\|WP_085546911.1\|2744233_2745820_-\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|183615	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional.	0
NZ_CP018390.1\|WP_004548632.1\|2746180_2747974_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|213656	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.95969e-179
NZ_CP018390.1\|WP_085546910.1\|2743291_2743792_-\|AtpZ/AtpI-family-protein	gnl\|CDD\|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	2.75693e-17
NZ_CP018390.1\|WP_085546909.1\|2727223_2730484_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.78872e-92
NZ_CP018390.1\|WP_085503033.1\|2749384_2750563_+\|acetate/propionate-family-kinase	gnl\|CDD\|235922	PRK07058, PRK07058, acetate/propionate family kinase.	0
NZ_CP018390.1\|WP_071811430.1\|2731760_2733596_+\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	5.65725e-132
NZ_CP018390.1\|WP_085503031.1\|2747957_2749388_+\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	gnl\|CDD\|236180	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated.	0
NZ_CP018390.1\|WP_004524995.1\|2726153_2727227_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	1.83012e-39
NZ_CP018390.1\|WP_004524990.1\|2733957_2735523_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	2.47951e-79
NZ_CP018390.1\|WP_004188221.1\|2743788_2744244_-\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|184057	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional.	4.44077e-63
NZ_CP018390.1\|WP_004187193.1\|2742047_2742296_-\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|184067	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional.	4.45015e-37
NZ_CP018390.1\|WP_004533337.1\|2738449_2739298_-\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|376304	pfam00231, ATP-synt, ATP synthase.	4.46992e-34
NZ_CP018390.1\|WP_058040623.1\|2739294_2741301_-\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|183987	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional.	0
NZ_CP018390.1\|WP_004552097.1\|2730486_2731611_+\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	1.904e-25
NZ_CP018390.1\|WP_004524985.1\|2742990_2743299_-\|membrane-protein	gnl\|CDD\|274462	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2. Members of this protein family are uncharacterized, highly hydrophobic proteins encoded in the middle of apparent F1/F0 ATPase operons. We note, however, that this protein is both broadly and sparsely distributed. It is found in about only about two percent of microbial genomes sequenced, with the first ten examples found coming from the Euryarchaeota, Chlorobia, Betaproteobacteria, Deltaproteobacteria, and Planctomycetes. In most of these species, surrounding operon appears to represent a second F1/F0 ATPase system, and the member proteins belong to subfamilies with the same phylogenetic distribution as the current protein family.	4.12229e-10
NZ_CP018390.1\|WP_004187346.1\|2742292_2742994_-\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|237383	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional.	1.54059e-122
NZ_CP018390.1\|WP_004529178.1\|2737193_2738219_-\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0

>NZ_CP018390.1|WP_058040623.1|2739294_2741301_-|F0F1-ATP-synthase-subunit-alpha
MTPTPDAPAAAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAPAACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAALGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYAQFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDARIAALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAFGGEQARGDADRDADHGANREVSPEASREVSREVSREVSHEANRDAAADAARVAGRAPGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGDAARTAPSPQGGADANVNADANVDAEAEARHKR
>NZ_CP018390.1|WP_004533337.1|2738449_2739298_-|F0F1-ATP-synthase-subunit-gamma
MSDKLAAIEARTDTARQLQTVIGAMQGVAAARAHEAQQRLPGIRASAATVGAAIGDALSAGARSGDTAAGARAAPRARLVVVLCSEQGFVGAYNAQLIEHATRPEPSVSREYMMVGSRGAMLADAGGVPLVWRTPMAARADDVVHLANRITDALYAHLAKRGAQPVSIVHAMPGGAARLEVTERRLLPFDYARFDTAPRAQPPLVHLPPATLLAELAQAYVFVELCEAAMLAFAAENEARTRAMIAARESVERALGDLLQAYRIARQDEITADIVELAASGL
>NZ_CP018390.1|WP_004529178.1|2737193_2738219_-|alcohol-dehydrogenase-AdhP
MAQYMKAAVVHAFGEPLRIEEVPVPTPGAGQILVNVKASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGFVAAVGEGVRHVKEGDRVGVPWLYTACGHCEYCQTGWETLCHEQQNTGYSVNGSYAEYVLADPNYVGHLPSNVAFDEIAPILCAGVTVYKGIRVTDTRPGQWIAISGIGGLGHVAVQYAKAMGLHVVAVDVAPQKLELARKLGAAFVVDASKDDPAAVIQKEIGGVHGVLVTAVSRGAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESLDFAAEGLVRAHIHRDKLEHINGVFSALREGKVDGRIVLTGQ
>NZ_CP018390.1|WP_045597583.1|2736630_2737134_-|hypothetical-protein
MRGAGRASPSRARRYENVSKEPNTHREAGAPVHRYRLQVRNMNGECRTYELRLSSLDDGYTLEIDEWLNFPDMHLGDVTPVHVSRPVQFAVPAHEFYRRRRAFRTELIESVAAALRAGEVVRMRDSPDEYPGGRAGNPWVNWIRADLRANPGGRPPPVGDDMQDLIH
>NZ_CP018390.1|WP_004524989.1|2736063_2736573_+|hypothetical-protein
MRRIYFLLPDADTARAIVDELLLKRIEWRHIHVVANDRVPLENLPEASIAQSSDLLPALARGTAAGGVTGALAGLAAIAFPPAGLTIAGGAVVAFAIAGAGFGAWVGTMIGVSVPNTRLKHFEDAVDNGELLMMIDVHRDRVEEIEALVKQHHPNAHLEGTDPTIPAFP
>NZ_CP018390.1|WP_004524990.1|2733957_2735523_-|methyl-accepting-chemotaxis-protein
MPTLSFRQKLWLPLVISLIALLLVSISSAWLSYQTRMEERRNDLTNVAHVGLSIVREYAALAQRGVLTDAQARKEALERLRSVRYGSDGYFIVIDSSPRMIMHPIKPDTVGKDLRHVADADGRHHYLTFASVAQSPQGGFVDYVFAHPNAHPAKAVDKLGYVIRYAPWDWIISTGAYIDDIQAAFAKSLCLSAGVFALLAALLALSVVYTNRGIERMIGGDPRIAAHMAGVIASGDLATPFATRREDRSSLMFAISQMRDALANAVAQIRASAGYVATTAGEIADSNMDLSSHTECQATALQQAASSMQRLTERVRDTADRARAASELAGSAARITDRGGDMVVRVVAAMNDIRAESRKMVDIIGVIEGIAFQTNILALNAAVEAARAGNEGRGFAVVASEVRVLAQRSASAAKDIRALIGRAAERVGNGAELVEATGATIGEAQHAICRVTGIVQDIAAAATDQSQGLEQINAAVSQMDSVTRRNATLVEHAAIAAQSLNEQSRCLQDAVAAFRTEALGC
>NZ_CP018390.1|WP_071811430.1|2731760_2733596_+|response-regulator
MHVEVFAQHSSCPGWHGEMARRIRAFDWSATELGPLERWPASLVAAVRTVLASPVPLVMLWGASGYMLYNDAYAAFAGGRHPYLLGQPVELGWPEVADFNRNVMRTCLAGGALSYRDKALVLLRNGRPEEVWMDLYYSPLAGDDGAPAGVLAVVVETTERVLAARHRDRAKAALHETNAELRRLTETLEQRVADAITERASIEEQLRQAQKMEAIGSLTGGIAHDFNNVLQVVSSNLQMLSAELGEDARAQRRIASAANAVARGAQLASHLLAFARRQPLAPAVLEPRGLIDGMREMLHRALGESVHVDADLRDDVWNVLADRHQFENALLNLAINARDAMRGEGTLKITACNIVLDAGRHARRNGLPPGEYVAFDIADNGVGMTPDILERVFEPFFTTKPDGQGTGLGLSMVFGFVKQSGGHTSIESAPGRGTTVRLLLPRCREAPAGEPAAQRRLPAEGGRETILVVEDDADVRLAVVDMLAQLGYKVITASDGEAGLLALESGAPIDLLFTDVIMPGRIKGGELARRAAQRVPPVPVLFTSGYTRDEIFHAGRLDPGVMLLGKPYRRDELAHKVRSVLDAHASARRARGARHAQADPRAKTAAARVQR
>NZ_CP018390.1|WP_004552097.1|2730486_2731611_+|ABC-transporter-permease
MRRLAIVYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDASPLSARIASAFFPPQFALPRMVTLAEADRGMNAGDFTFVLDIPPNFQRDVLAGRPAQIQLNVDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVDIAMHMRFNPNLDQTWFGSLMEVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSLAFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQLLSGSLTPRESMPFAVQNIMLAAPTTHFVEIGQAILYRGAGIETVWRKFLILAVIGTALFLLSLKRFRKTIGQMA
>NZ_CP018390.1|WP_085546909.1|2727223_2730484_+|ATP-binding-cassette-domain-containing-protein
MSAPSVVRFSDVSLRYGKTVALERITLEIPAGLTIGLIGPDGVGKSSLLALAAGARALQTGAVDALGGDMRSRRHRERVCRRIAYMPQGLGKNLYPTLSVEENLQFFARLFGHDADERRRRIDALTRSTGLFAFLSRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDLIARIRSERPAMSVIVATAYMDEAQRFDWLIAMDAGRVLATGAPAELLARTGCDSLEAAFIALLPEDERRGHKPVTLEPLRADAQTGTAIEARGLTMRFGDFTAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPATEGTAQLFGKTVDPKDINTRRRVGYMSQAFSLYSELTVRQNLVLHARLFGVPAAEIDARVDEMARRFGLADIYDMLPDSLPLGMRQRLSLAVAMVHKPELLILDEPTSGVDPVARDSFWQLMIDLARRDRVTIFISTHFMNEAQRCDRISLMHAGRVLASDAPAALVRARGAATLEEAFIGYLVDASAQEAQGGAGGRPGAGERAAGESLAGRGAATDGDADGAHARPAAYANGAAQHRAPDADAAGTDVAAETGARDDARTAHAAGHSAGNDVRATVGSEVGSEVGSEVGSDVGSDVASEAGPEAGLAASAESGAERAREPAADITADAGAAIDVEPGASAESATAAVAPARHAESAATSPRAGNAPAGTPFAAAPPSHAAPAEPPHRAFSAQRALSYMWREMLELRRDPVRATLALIGSLVLMCVIGIGISLDVEDLTYAVLDRDQTELSHDYALNLSGSRSFVERPPIADYAALDRRMRDGELSLAIEIPPNFARDVERGAPAQIGMWIDGAMPQRAETIRGYAIGMHTMWLADKARHRLGVTLAPRAEVVTRYRYNPDVKSLPAMIPAVMPLLLLMLPAMLTALAVVRERELGSILNLYVTPVTRTEFLIGKQVPYVVLAMLNFLLMTMLARIAFDVPVKGSFMTLLLAVLIFNVVATGIGLLASTFTRSQVAAIVMTIIGTMIPTVQFAGLLTPLSSLEGTGRLIGLVYPATYMLSISRGVFNKALSLHDLYSQFWPLAASVPVILGATILLLKKQER
>NZ_CP018390.1|WP_004524995.1|2726153_2727227_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MIQVTRKQIVAAAAVVVVALGAYYGWTLLRHQGPGDGFASGNGRIEATEIDVATKLPGRIDAILVDEGDFVKAGQPLANMQIQVLRAQYDEATAQRQRALNTAAGVQSQVAQRKSDKAAAQAMVVLRESELDAAERRLARSQTLSREGASSLQELDDDRARARSAQAAVSAAAAQVAAAQAAIEATEAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQYRVAQPGEVLPAGGKVLNLVDLSDVYMTFFLPETVVGRVALGADARIILDAAPNYVIPATVSFVSSTAQFTPKTVETANERQKLMFRVKARIDRELLQKHLKLVKTGLPGVAWVRVDPSKPWPAQLMVKVPQ
>NZ_CP018390.1|WP_004187193.1|2742047_2742296_-|F0F1-ATP-synthase-subunit-C
MNNLIEVVSIAAAALAVSFGAIGPALAEGRAVGAAMDAIARQPDASGTVSRTLFVGLAMIETMAIYCLVVALLLLFANPFVK
>NZ_CP018390.1|WP_004187346.1|2742292_2742994_-|F0F1-ATP-synthase-subunit-A
MNASPLSTVPLFSVGPVGISAPVLATWAIMAVLVALALVARRRLSVDAPSRLQSVLELFVATVDAQIADTMQTPPARYRALIGTIFVLVFCANGASLVPGVEPPTAHLETDAALALVVLAATLYYGVRARGVRGYLATFAEPTWVMIPLNVVEQLTRTFSLIVRLFGNVMSGVFVIGIVLSLAGLFVPIPLMALDLLTGTVQAYIFMVLSMVFIGAAVSGDETSAPRRGQENT
>NZ_CP018390.1|WP_004524985.1|2742990_2743299_-|membrane-protein
MIEMWETARASFDGIAAAIGLALGFVAGACHFVSLGWNSRLFVAGRAGVALALQLARVALAVAVLVVLARAGFGMLVAGSAGFFAARAIAVRRAAALTGARR
>NZ_CP018390.1|WP_085546910.1|2743291_2743792_-|AtpZ/AtpI-family-protein
MMKRRPPEVKHEAREARDDAARGDARHAGAGAAPDDPRDAARRDPSPGSRAARGGATHPAARAAEPAAPKPAADRVERAAHTAAARAARGARDPEPSLGRRLAQIGVLGWTIVAPTLAALALGRWLDRMFATRVFFSAPLLMLGAALGLWLAWRWMKAQQHGDRDD
>NZ_CP018390.1|WP_004188221.1|2743788_2744244_-|F0F1-ATP-synthase-subunit-epsilon
MGAELRVTIATPARVCVDDLPIVSLRAEDASGAFGIRAGHVDFVTLLRASVVRWRTADGATHYAALDGGVLRVTRGARIEIACRDAVLGESLAELEAVVRGVRATQLDEKRRARVDETRLHAQAVRRLLTYLRPEHAKDGVHAPLKPETLE
>NZ_CP018390.1|WP_085546911.1|2744233_2745820_-|F0F1-ATP-synthase-subunit-beta
MADPQATNGTGAACAERDASDVGDARDEGAGRVVAVRGAVIDVAFDGGALSALNEALTIPVDGAAPILAEVHAHLSDAAVRALALGPTGGLRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPLLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGISVFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERIASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDVIALLGIDELGADDRRLVGRARRLQRFLTQPFAVTEAFTGQAGASVEIADTIAGCRAILRGDCDDWRESSLYMVGTLDDARRKEAAAREADARREAAAAASGAGPGTTSDPASGSAEPQGARHGR
>NZ_CP018390.1|WP_004524981.1|2745791_2746049_+|hypothetical-protein
MPFVACGSATVAPVWLVRRWLHHNGARRPPADLGQETGNRQTKRGIAQSETIDASASGADTVRAASIVDSNQIPQTYAWLQWPCQ
>NZ_CP018390.1|WP_004548632.1|2746180_2747974_+|alpha/beta-fold-hydrolase
MDTRHAPESGAPDAPLPAHPPASYAPESPYRIFDLAKEASVAKLTSGLSPASLQLALADWLIHLAAAPGKRAELATLALRHAALLGQYLLEAATGRTPAAPAQPSPGDRRFRAGAWQLEPYRFWHQSFLLAEQWWRAATRDVPGVSPHHEDVVAFSARQMLDTFAPANYVATNPEIAQRTALTGGANLAQGVWNYLDDVRRLITKQPPAGAEQFELGRNLATTPGRVVFRNHLIELLQYSPTTPDVYAQPVLIVPAWIMKYYILDLSAHNSLIRYLVGEGHTVFCISWRNVDASDRDLSLDDYRKLGVMDALDTIGAIVPGEKIHATGYCLGGTLLSIAAAAMANTGDDRLASVTLLAAQTDFAEPGELQLFIDDSEIHFLESMMWERGYLGAHQMAGSFQLLMSNDLIWSRVIHDYLLGERTPMIDLMAWNADSTRMPYRMHSEYLRHLFLDNDLATNRYVIDGQTVSVHNIRAPFFVVGTEHDHIAPWRSVYKIHYLSGSDVTFVLTAGGHNAGIVSEPGHAKRHYRMKMTAAAAPSISPDEWLAGATDFEGSWWPAWHAWLARHSSPQRVAPPPLGKPGAHTLGDAPGTYVFQK
>NZ_CP018390.1|WP_085503031.1|2747957_2749388_+|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase
MCSRNRECRVDREILQNRPFDSLAIGDSASLVRTASRDDIDLFAAMSGDVNPAHLDAAFAAHDLFGHVVVHGMWTGALVSAVLGTKLPGPGTIYLDQTLEFRHPVAPGDTITATVTVAEKRPEKRIVLLDTRCTNQDGHVVLRGTATVIAPDTPITWERVPGPEVAVRRHDRYETFVRDAREQPPLRTAIVHPCSPDALRAAIDARDANLIEPILIGPQAKIRAIADAAGVDLAGVPIEAVEHSHAAAARAVEMGGAGEVAALMKGSLHTDELLAAVIGPASRLRTERRISHVYAMDVPAYPKPLLITDAAINIAPTLEQKRDICQNAVDLLHVLGVERPRVAVLAAVETVNPKMPSTLDAAALTVMAARGQIAGAIVDGPLAFDNAVSAVAAMSKGIASPVAGDADVLLVPDLEAGNMLAKQLMYFAGADAAGLVLGARLPIILTSRADSLRVRIASAALAKLVAERTRAGALAS
>NZ_CP018390.1|WP_085503033.1|2749384_2750563_+|acetate/propionate-family-kinase
MSEPLLLTFNAGSSTLKIGLYSVANGEPAPLGRGKIDFNRAPLQFEYANGSEAHAVPLAAPVTDDLHAVLDEALGWIDAHLSVHELVSVGHRVVHGGDTFDGPVRIDERTLDAIAALVPLAPLHQPQSVRLIRALRHVRPHLPQVASFDTAFHRTQSDLVRRFALPRALFDAGIKRYGFHGLSYRYVAGRLRERHPSIARGKVVAAHLGSGASLCALDAGVSRDTSMGFSTLDGIPMATRCGALDAGVVLHLQKTLGRTLDDVEQMLYHRSGLLGVSGVSGDARALLADPSAGARDALELFAFRIAGETARLAATLGGLDALVFTAGIGEHQPQTRAAVCERLRWLGVELDAHANARNAETVSRDGSRVAVLVVPTDEEQVIARDAASVLHA

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Crispr_ID: NZ_CP018390_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018390_2

3182521-3182606

Orphan

Consensus_repeat	Method
CGGAATGCCCGATCATCGGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018390_2

>merge|NZ_CP018390|2|3182521-3182606|CRISPRCasFinder
CGGAATGCCCGATCATCGGGATGCCTGCTCGCCGAAGCACTCCACCGCAGAGGCGCCGCCGCCGGAATACCCGATCATCGGGATGC

>NZ_CP018390|2|2|3182521-3182606|CRISPRCasFinder
CGGAATGCCCGATCATCGGGATGC	CTGCTCGCCGAAGCACTCCACCGCAGAGGCGCCGCCGC
CGGAATACCCGATCATCGGGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018390.1\|WP_009969560.1\|3171988_3172315_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018390.1\|WP_009969588.1\|3196019_3197825_-\|fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|235730
NZ_CP018390.1\|WP_004530663.1\|3192348_3192798_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341411
NZ_CP018390.1\|WP_004545438.1\|3183210_3184482_+\|polyhydroxyalkanoate-depolymerase	unknown	unknown	gnl\|CDD\|130908
NZ_CP018390.1\|WP_004200700.1\|3173779_3174895_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378454
NZ_CP018390.1\|WP_004523291.1\|3175192_3176128_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176109
NZ_CP018390.1\|WP_009950893.1\|3172646_3172952_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240624
NZ_CP018390.1\|WP_004552281.1\|3193251_3193905_+\|SagB/ThcOx-family-dehydrogenase	unknown	unknown	gnl\|CDD\|380318
NZ_CP018390.1\|WP_004196898.1\|3173037_3173478_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP018390.1\|WP_009982169.1\|3178975_3181249_-\|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|369639
NZ_CP018390.1\|WP_085546945.1\|3190029_3191892_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223732
NZ_CP018390.1\|WP_004529498.1\|3193972_3194407_-\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|223149
NZ_CP018390.1\|WP_076851866.1\|3184754_3186539_+\|ribonucleotide-reductase-like-protein	unknown	unknown	gnl\|CDD\|180772
NZ_CP018390.1\|WP_038793455.1\|3177033_3178692_+\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP018390.1\|WP_009982175.1\|3189001_3190033_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236122
NZ_CP018390.1\|WP_009927403.1\|3174955_3175066_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018390.1\|WP_085546986.1\|3194812_3195940_-\|porin	unknown	unknown	gnl\|CDD\|238208
NZ_CP018390.1\|WP_076804964.1\|3176302_3176734_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018390.1\|WP_004187469.1\|3181381_3181777_-\|conjugal-transfer-protein-TraR	unknown	unknown	gnl\|CDD\|224648
NZ_CP018390.1\|WP_004532595.1\|3186613_3188425_+\|bifunctional-aminoglycoside-phosphotransferase/ATP-binding-protein	unknown	unknown	gnl\|CDD\|225098

Protein	Function_ID	Function_description	E-value
NZ_CP018390.1\|WP_004530663.1\|3192348_3192798_-\|CBS-domain-containing-protein	gnl\|CDD\|341411	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and archaea. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	3.14402e-50
NZ_CP018390.1\|WP_004545438.1\|3183210_3184482_+\|polyhydroxyalkanoate-depolymerase	gnl\|CDD\|130908	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some [Fatty acid and phospholipid metabolism, Degradation].	2.62791e-114
NZ_CP018390.1\|WP_076851866.1\|3184754_3186539_+\|ribonucleotide-reductase-like-protein	gnl\|CDD\|180772	PRK06948, PRK06948, ribonucleotide reductase-like protein; Provisional.	0
NZ_CP018390.1\|WP_004523291.1\|3175192_3176128_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176109	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of dinitrotoluene and similar compounds, such as DntR, NahR, and LinR. The transcription of the genes encoding enzymes involved in such degradation is regulated and expression of these enzymes is enhanced by inducers, which are either an intermediate in the metabolic pathway or compounds to be degraded. Also included are related LysR-type regulators clustered together in phylogenetic trees, including NodD, ToxR, LeuO, SyrM, TdcA, and PnbR. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.07132e-61
NZ_CP018390.1\|WP_009950893.1\|3172646_3172952_-\|hypothetical-protein	gnl\|CDD\|240624	cd05299, CtBP_dh, C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor. The transcriptional corepressor CtBP is a dehydrogenase with sequence and structural similarity to the d2-hydroxyacid dehydrogenase family. CtBP was initially identified as a protein that bound the PXDLS sequence at the adenovirus E1A C terminus, causing the loss of CR-1-mediated transactivation. CtBP binds NAD(H) within a deep cleft, undergoes a conformational change upon NAD binding, and has NAD-dependent dehydrogenase activity.	0.0059154
NZ_CP018390.1\|WP_004552281.1\|3193251_3193905_+\|SagB/ThcOx-family-dehydrogenase	gnl\|CDD\|380318	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC. This family is the oxidase domain of NRPS (non-ribosomal peptide synthetase) and other systems that modify polypeptides by cyclizing a thioester to form a ring. These include EpoB, part of the epothilone biosynthesis pathway; TubD, part of the tubulysin biosynthesis pathway, MtsD, part of the myxothiozol biosynthesis pathway; IndC, part of the indigoidine biosynthesis pathway and TfxB, part of the trifitoxin processing pathway. All are FMN-dependent and oxidize the product of the cyclization of thioesters in short polypeptides.	4.23582e-20
NZ_CP018390.1\|WP_004187469.1\|3181381_3181777_-\|conjugal-transfer-protein-TraR	gnl\|CDD\|224648	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms].	1.7869e-14
NZ_CP018390.1\|WP_004196898.1\|3173037_3173478_+\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	3.1145e-25
NZ_CP018390.1\|WP_009982169.1\|3178975_3181249_-\|pyridine-nucleotide-disulfide-oxidoreductase	gnl\|CDD\|369639	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.	1.85643e-56
NZ_CP018390.1\|WP_085546945.1\|3190029_3191892_+\|STAS-domain-containing-protein	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	5.87102e-106
NZ_CP018390.1\|WP_004529498.1\|3193972_3194407_-\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	9.00264e-33
NZ_CP018390.1\|WP_004532595.1\|3186613_3188425_+\|bifunctional-aminoglycoside-phosphotransferase/ATP-binding-protein	gnl\|CDD\|225098	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown].	3.75845e-75
NZ_CP018390.1\|WP_009982175.1\|3189001_3190033_+\|hypothetical-protein	gnl\|CDD\|236122	PRK07877, PRK07877, Rv1355c family protein.	2.5119e-30
NZ_CP018390.1\|WP_009969588.1\|3196019_3197825_-\|fatty-acid--CoA-ligase	gnl\|CDD\|235730	PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP018390.1\|WP_085546986.1\|3194812_3195940_-\|porin	gnl\|CDD\|238208	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane. Individual 16-strand anti-parallel beta-barrels form a central pore, and trimerizes thru mainly hydrophobic interactions at the interface. Trimers are stabilized by hytrophillic clamping of Loop L2. Loop 3 bends into the pore, creating an elliptical constriction of about 7 x 11A, large enough to allow passage of a glucose molecule without steric hindrance. Removal of the C-terminal residue (usuallly F) destabilizes the trimer and removal of the 16th beta-sheet abolishes trimerization. Unlike typical membrane proteins, porins lack long hydrophobic stretches. Short turns are found at the smooth, periplasmic end, longer irregular loops are found at the rough, extracellular end. C-terminal residue forms salt bridge with N-terminus.	1.39174e-54
NZ_CP018390.1\|WP_004200700.1\|3173779_3174895_-\|hypothetical-protein	gnl\|CDD\|378454	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport. This family contains polyketide cylcases/dehydrases which are enzymes involved in polyketide synthesis. It also includes other proteins of the START superfamily.	2.16274e-11
NZ_CP018390.1\|WP_038793455.1\|3177033_3178692_+\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	1.99057e-37

>NZ_CP018390.1|WP_004187469.1|3181381_3181777_-|conjugal-transfer-protein-TraR
MAAFDEHQLQVLGALLRACRQALQADVRAGERQRADEPYANLAGPAPDEGDEANADLFVDVDHALLGMKLAELRDVDAALQRIARRDYGCCADCGQPIAYERLLARPTALRCAPCQRAHERRFATQPRPSL
>NZ_CP018390.1|WP_009982169.1|3178975_3181249_-|pyridine-nucleotide-disulfide-oxidoreductase
MREFDYLLVGGGIASVTAARTLRGEDASASIAILCGEPVLPYQRPPLSQEWLMGAVQPVSITLHDAAFYAAQRIDIALGVRAEQLDRAKRIVRTSSGATFRYGKLLIATGASAKAPALPGFGLDGVHVLHTFAQAQALKDAAAHARRATVLGGGFLGVEIAATLQALGLQVTLVERAPGVMPSLRAPALGGHFEALCRARGIDVLTRCEVRRVLGAQCVEAVETSDGGTRPCDLFVAAVGVTPNCGWLDGSGLALGDGVEVDAFLQTADPDVFAAGDVAHFDDPIFGVRRRIEHWDNAVRQGRIAARNMLGHRLPYRDVSIFYGSVFGLSYNLLGYPVGATETIERGAFDEASYMQLYLADDVLRAAFTIDRPAVEIAALNDAIRLHVNVAAHKMKLSDPNYPLDKLPVQTILILQGGGALGAFECGAVKALEQHGVRPDVISAVSIGAFNGAIVASHPKGATKALEAFWRELSIALPLPYESQWREAWLSSYVLSFGVPNFLKPQWSQLGFDADRLRAKWTSFFDATAIEQLIARYVDFDSLGMSPTRLLIGAVDVETGEPRIFDSYVDRLSPAHVLASGSLPPGMPWTVVDGRPYWDGGVVSNSPLDLVIARCGQIGGRVFIVDLFSGSKALPTNLVEVMLRREEIAYMDRVRNDLRFEEYASDFRDLVDGILAHVDAPSANEIRQQPLYIRLMGNRAAIDIARITLNREGRLSFIEDYDFSSDAIAQLQQQGYDAALVALANGRSRRRRGRRRA
>NZ_CP018390.1|WP_038793455.1|3177033_3178692_+|GMC-family-oxidoreductase
MKQQSYDYDYVVVGSGFGGSVSALRLSEKGYRVLVIEQGRRWTPENLPESTWNLSRWQWRPALGLRGFFSMRFFRHVVVLHGNAVGGGSITYANTLLVPPDKVWREGTWAGLEDWERVMPAHYATAKRMLGVVTNRRMDAADFRLKDMAKLIGVEKSFYPTEVGVFFGDDADAPGTRYADPYFGGAGPERTSCIGCGGCMVGCRHGAKNTLDRNYLYLAERLGAQVREQTKVVDVRPLDARADGAAGYAVEAVSLAAGARGAKSRLTCRGVVFAASSLGTQDLLMRLKEKGSLPRLSDALGKRVRTNAESLIGVRFPKSRVDLSKGVAIGSGIYIDEHTHIEATRYPSGSDTMGLLTTVLTRGAPGGLRVLVWLGALAKLVLTRPLSAWRMIDPRGFARETMIFLCMQTLEGHLTMRLKRRWFWPFSKQLATSGAKIPAYIPAANDFAQKAARALGGVPMTSLTEILLNVPMTAHCMGGAAMARDARDGVCDGRSRVFGYRNMYVCDGSVLGANLGVNPSLTITALAEHAMSHVPAAREQRWDSTAETLVAA
>NZ_CP018390.1|WP_076804964.1|3176302_3176734_+|hypothetical-protein
MHQERRKRNADRHGTHQYDADSRAAPREAPRFEHEPKKQRDAAQHEVDRDRAAREIRERIEHKARPDVRRAERPISQDVAQAPIGAAGAISPSTAHSIFLEIGLALAGRPIQVRRNRAPFTHGTPRRRPARGPTARTASPAPV
>NZ_CP018390.1|WP_004523291.1|3175192_3176128_+|LysR-family-transcriptional-regulator
MIQNLRQLDLNLLLVFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEPVRQALYLLQIGLGPQADFEPDTHHLFKLSMNDYGQTVLLPDLLAHIKSRAPNVMLSVQSDDAGSIPAQLTTGTLDLAIDYLHFDNPELCYEPLHEEHLVVIGRAGHPAFAGGLALRGYEESGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSDLLGTIPRRLAERFADVYALQIAPLPIDIAPIQVSLIWHRQQDAQPGLRWLREQVVLTHRAIIGCDEHAPA
>NZ_CP018390.1|WP_009927403.1|3174955_3175066_-|hypothetical-protein
MQSTGSFDISARRMIEFRSVNKSNHDCPLEKSSGLL
>NZ_CP018390.1|WP_004200700.1|3173779_3174895_-|hypothetical-protein
MTQDVTVFRARYRASVHPRYNAWLHGGFVLAYGCAAIAFFLKDVARVSAVQWASVPAAFLLFNWLEFTVHRHVGHVKRRFGAMFYRRHTGDHHSFFANEQIAYREARDWRVILFPAWLIVVFSLGLFALHAVLGRFDANVAGLFASTMLGGYLLYECVHACEHLPDAHPLAKWPWIRQMRVLHRVHHRDALMRSCNFDVIWPLMDWLHGTLRWSEAPGADMSTRMRHEIDIACAGADVLAYASDASRWPEWHPSSLRVDGPAGSLAAGSRFDEDVRAAGRVDRLHWDVVRNEPGVMWQARAANTAGSLRILLTYECSGGPRGARFVRTLHYHSPNPLLRLANALVMRGRVERESAYSLTLLKRRLEAARDA
>NZ_CP018390.1|WP_004196898.1|3173037_3173478_+|SRPBCC-family-protein
MKQQRIEIAEEFDAPVHQVFRFFSEHENLKSIFSPAKIRRISDGEPARNGVGSAREMRVPGAPPFVETVTAYQENELIEYRITRGSPLRDHLGVMRFVPIDERRTYFHYVITFEGKVPFVAPVVRHVLEGSIRRGLGKVATRRLWG
>NZ_CP018390.1|WP_009950893.1|3172646_3172952_-|hypothetical-protein
MRHDSRLRCTRDDDDIDQCHRQSGRSPLDAEPNRGCAARRLRASGGRRPRGANTEPRRRKPHARVIRQRSWRAARTRPCRRFSAACGRFGQAMARRARPPA
>NZ_CP018390.1|WP_009969560.1|3171988_3172315_+|hypothetical-protein
MRHACRACGPRVRRTRFCAMRKRGETHGRSLSLSLAHRATDARRARCPHSRHELCTRARAPARERRRCIASRISLITTINFRAVAFRPRLPKNYIDRCNHRSAGTPAA
>NZ_CP018390.1|WP_004545438.1|3183210_3184482_+|polyhydroxyalkanoate-depolymerase
MLYAWLEAQREFFRACQPWAGAAQRAGAGAGARPAGWPTWGPMARAADAVPAPPPFAIASIEIDGAAVPVDECVVDDTPFCALRKFSRRLRGDAAARPAVFLCTPLAGHHAVMLRETVETILATRDVYVTDWRNARDVPLEAGAFGLDDYVCTLERFVAGAAGDGLHMMAVCQATVPALAAVALLAARDVHVTSVALLGGPVDTRSHPTLIDRFALEHDLDWFRRTAIDIVPPPYAGAGRRVYPGFIQHAAIIVAHPQRRASLESRYWAAWMTGDFAAAARCLREMNEYGAVLDMTERYFLDTIRVIFHERLLAQGRWSIGRRLVAPRRLTRTALCTIEGGRDDIAGAGQTHAAHALCDAVPDAVRERITEPDCDHYDLFLGPRWRRTIHPALDAFWTRAEAARAAAGEPRPTAERAERRIAH
>NZ_CP018390.1|WP_076851866.1|3184754_3186539_+|ribonucleotide-reductase-like-protein
MIGDMDDQPICDAVFADRYALPGEHSRAQACARVARALALAEPMATRSGAARRFYRNLLNGAFGAGRIMARAGAAPDQTMASCFVHPIRAPAALTRFHPNLDEALDEARLALAMGADIGYDFSAIPPAGARPDADHPDSPGVCAALDRFDRIGTQAGERDGRRRAQLAVLRCDHPDLLAFAAAKHRHAGRHARWTTLELAVAATDAFMQAVEQDLPWTLRHTAPPRDAPGGALPGADGAWTYASVPARHVWREIVSAARDGAGPGLVFVDAIDAADPLRGRERIDATSPCGAQPLPPYGSAMLGAINLSRFVRNPFGAGGEPRFDFAAFDTAVRIEVRLLDNALDVTRWPLAAHARESYQKRRIGVGVTGLADMLAMMRLRYDSPAAREMARYIASDLRHHAYAASAELAAERGAYPLCDRHAHLDALRAGPPLPHAVCHAIERDGLRHSHLTSFAPVIGVSLAFGDHCSPGIEPARAWIEHRPVRAGAAGAPGMRAENHAHRLFRSLRGERAALPDYFATDADVAPGERLAMRVALQPYVDAGIDNTLTLANHYSLEEVNALLFAAWRAKLKSVAIRRADLARDAQPSDDDGV
>NZ_CP018390.1|WP_004532595.1|3186613_3188425_+|bifunctional-aminoglycoside-phosphotransferase/ATP-binding-protein
MTTGAVAARRLPRRGTARGRRAPSRAFTIHGGDEMRRSRPPKPAKPAAVRRRPHGAARAHAIRGNGPQRRAVRERAARRLSRDIDAALRRASTYPHPAGPIVRIETHLSVVYLVGRFAYKRLKPFDFGFANFSELAARRRACEAELALNRPLAAPIYLAAGPLVRRARGLRLFGAGAAVDHVVRMRRFDERMLFSRLLARGALDAADIDAAATRLAAYHLHAPRDIPRRAYGSARELRRQLDDMLAPLERALGAALPASLRAWCVRRCDELAAHLDARRADGYVRACHGDLHLNNVVKRGRDALMFDCIDFDDALRWIDVINDLSFLLMDLHAHDRAALAHRLLNRWLDETGDFAGLAALPLYVAYRALVRALVATMRAGGDAAARAARIERARRYVDVAAHAARARRPCLLLCHGYSGSGKSVASRALADVSGAIRLSSDSERKRARPFAAVDARPLPASAYTPQQIDAQYERLRALARDVLRAGYTALVDATFLSHARRARFFALARELGVPVYVLDFHASRACLERRVDARAAARDDHSDAGAAVLATQRASADPLDADERARTIGFDTDVPLATLRSAGYWRPVLDALDAARVDAQATR
>NZ_CP018390.1|WP_009982175.1|3189001_3190033_+|hypothetical-protein
METSPLKTTTPEAIPPFNPSASVEDKLRLAIHYAILAPSSHNTQPWRFMVGDGSVMLCADRLRALSVVDPYDRELLISCGAALLNLRVALSRFGFAYVIDMFPSPSDPDVIALVRLDPHGYHDESLVPLFDAILERVTTRTPYANEAVPCDVQRALVDAGAAEGAEIACVDAPHALDEIAELIADADRLQFADPRFRRELANWVHPRRHDDGMPAFAAGVPALLDFATPVVASAIRTFDLGGGLAAMHHKLVDGSPLIVGISTASDDRDAWVAAGQALERVLLVAAAAGLTASYLNQPIEIDALRERLRPLLHVDAHPQLLLRIGRGPVVAHAPRRPLMDVVS
>NZ_CP018390.1|WP_085546945.1|3190029_3191892_+|STAS-domain-containing-protein
MTERERAARGRNDARRGGGDSGGDDEAWRRWLPGIATLRTYRRAWLARDLYAGVALTAVLVPVGMSYAQAAGLPVIAGLNASIAALVGYAIFGPSRILVLGPDSALAALIAGAIAPLAHGEPAHAVALAAALALMSGGFCVLAGLLKLGFVTDLLSKPIQYGYLNGLALTLIASQLPSLLGTVPLGGTFVDQVASLAATVAQGRIDFASLALGGGCLAGIALLRRVAPAWPGMLIAVAGASIVAAWLGAAPDAGGAHAHVAYAHVAYAHVAYAHVANAHVALVGSLAGTLPPLGLPSISLADASRLIAGALAIAMVSVADISVLSHVFAQHDGSETDRNQELCALGAANLLAGMLRGCAVSSSASRTPVALAAGARTQLTSLVAAACIALLLVAPTLLARVPLAALAAVVVYSANALVDVRAIVRLYRVRRGECAVSVLCFAGVVLLGVVPGILLAVGLSLLSFVWRAWHPYDAVLGRVEGMHGYHDVSRHPGAALTRGLVAFRWDAPLFHANATIFRDHVRDAIAEADAPVRCVVIAAEPITDVDVTAADMLATLRDELAARRIALVFAEMKGPVKDRLRTYGLFEKIGADHFFPTVTDAIEHFTRMRKDVATARRARR
>NZ_CP018390.1|WP_004530663.1|3192348_3192798_-|CBS-domain-containing-protein
MNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIVLSLIAKDVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMRLTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASISRRQIHFEEKARD
>NZ_CP018390.1|WP_004552281.1|3193251_3193905_+|SagB/ThcOx-family-dehydrogenase
MSDPELLTYQPIAVALPGPAEAGAPAVIDLPPPDLGAGLPLMSALSLRASTREFSSAALAPTTLGELLWAADGVNRPTTGGRTAPSAHAFNEIDVYAALPDGVYRYDAALHRLLLKHAVDARNLTGYQDFVGAAPLDLIYVVRMSRLLSMPKPLRETFSAVAAGAIAQNVALYCASTGLGCVVRGWINHRLLAEALSLNEDELPILAQTVGKPAAHP
>NZ_CP018390.1|WP_004529498.1|3193972_3194407_-|Hsp20/alpha-crystallin-family-protein
MSNVTRYDPFSLEPVSDLFQGLFRPLRGIADADDEKLASMKIDVTENDQAYAVKAELPGVDKNDINVQIDGNTVSISAKVERNKELKEGERVIRRERYSGEFARTFSLANELDRDAASAQYQDGVLSLTLPKKASSEKKKLTIG
>NZ_CP018390.1|WP_085546986.1|3194812_3195940_-|porin
MNAKSIAAAALAVAQAGFAHAQSSVTLYGALDAGVLWQNTSAASFSPTAPNTGAVGRFKDGGVYSSLWGIKGTEDLGGGYRVHFRLQGAFDGGTGKFGLSDAPGAVAAFNQIATLGVSGPFGTFNAGRQIVPMIYAMADTDVRAARFFGSVLTAWLGLNTAAGWPGNSTNAPIGALYDSDALVYQSPAFGGASLALEYAPGGVPGGVQRGARASIVLKYASNALNLAAVYYNGHDTNPAPGASATGLDNNRFVYVGAQYKLKDVAVSASYGNGRNPARGDRVNLDMFAFGLGYRVSPFFRVSSGVYYLKDRNRSANRSTSIVLGADYELSKHTTLYAQGGRVDNRGTMAQMLAYGQPVAPGLATTAAMLGMRHSF
>NZ_CP018390.1|WP_009969588.1|3196019_3197825_-|fatty-acid--CoA-ligase
MHATDQHSALNAAPSAYVYPLLVGQLLTHARGADAGRQIVYRGDVRHSYAQFRERIGRLAGALAALGVGADATVAVMDWDSHRYLESYFAIPMMGATLFTVNVRLSPRQIAHTLRDARASVVVAHADFLPLLEQVRDALGDSACVIVACDGGAMPATSLPLAGEYERLVAAADPDYPFADFDENARAVLFYTTGTTGDPKGVCYSHRQIVLHALATAAALGAARDDQRLHRDDVYMPITPMFHVMAWGMPYIAVMLGLKIVLPGRYRAHALLDLRQAERVTFSHCVPAVLQMLLDEARLRACDLSGWKMIVGGSALPASLCRAARARRIDVFAGYGMSETGPVVALAQLRGTEGGVDVHADEDAGIDADVGAGIDVDTDVDADINANAGANASDSSVTTAAAHADDETAKRCAAGWPPPLVELRVVDAAMRDVPRDGRTPGEIVLRGPALALGYRGNPQASAALWAGGYLHTQDVAVMHGDGAIRIVDRIKDVIKTGGEWVSSLELEGLLNDIAGIRESAVVGVPDARWGERPAAVVVCERDAPLAAQDVRARLLEHVAANRISRYAVPECERIVFVDALPKTSVGKIDKKSLRRLVERID

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

128636 : 195428

Ralstonia_phage(25.0%)

holin,transposase,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004187738.1\|128636_130832_+\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
WP_009939047.1\|131023_131179_+	hypothetical protein	NA	NA	NA	NA
WP_157130097.1\|131317_131461_+	hypothetical protein	NA	NA	NA	NA
WP_119566680.1\|131498_132679_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.4e-54	37.0
WP_085546723.1\|132697_133354_+	hypothetical protein	NA	NA	NA	NA
WP_023358215.1\|133907_135077_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	1.9e-32	30.1
WP_080002191.1\|136439_136694_+	SET domain-containing protein-lysine N-methyltransferase	NA	NA	NA	NA
WP_009939053.1\|136690_137710_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_085546951.1\|137729_138182_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004533742.1\|138665_139586_+	ABC transporter permease	NA	NA	NA	NA
WP_004533801.1\|139569_140424_+	ABC transporter permease	NA	NA	NA	NA
WP_004552621.1\|140420_141452_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_004528499.1\|142039_142345_+	H-NS histone family protein	NA	NA	NA	NA
WP_085546952.1\|142674_145452_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	5.2e-89	34.6
WP_038797082.1\|145465_147706_+	DUF3274 domain-containing protein	A0A077K801	Ralstonia_phage	2.0e-22	27.4
WP_095413486.1\|147844_149383_+	DUF2875 domain-containing protein	NA	NA	NA	NA
WP_045597630.1\|149392_149656_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_004523721.1\|150070_150490_-	YjbQ family protein	NA	NA	NA	NA
WP_004523720.1\|150509_150836_-	thioredoxin family protein	NA	NA	NA	NA
WP_009967412.1\|151307_152000_+	hypothetical protein	NA	NA	NA	NA
WP_080307406.1\|152585_153209_-	DUF2244 domain-containing protein	NA	NA	NA	NA
WP_004523716.1\|153289_154885_-	cytochrome c oxidase subunit I	R9VX24	Flavobacterium_phage	1.9e-06	33.3
WP_004533827.1\|155139_155343_-	hypothetical protein	NA	NA	NA	NA
WP_028201534.1\|156035_157493_-	hypothetical protein	NA	NA	NA	NA
WP_153260193.1\|157837_158197_-	hypothetical protein	NA	NA	NA	NA
WP_085546725.1\|159046_161278_+	hypothetical protein	A0A2C9CZG8	Yersinia_phage	5.2e-07	46.1
WP_076852902.1\|161344_162832_-	PhoPQ-regulated protein	NA	NA	NA	NA
WP_004523708.1\|162867_163083_+	hypothetical protein	NA	NA	NA	NA
WP_004549711.1\|163093_163648_-	hypothetical protein	NA	NA	NA	NA
WP_085546726.1\|164232_164778_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_004533804.1\|164842_165580_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_085546953.1\|165803_168437_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_004529637.1\|168429_169002_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_076847500.1\|169066_169723_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004523701.1\|169725_171402_+	OmpA family protein	NA	NA	NA	NA
WP_004523700.1\|171779_172319_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004523699.1\|172352_173852_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004529642.1\|174051_174534_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_095413485.1\|174661_175204_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_085546954.1\|175209_176559_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004556024.1\|176555_177857_+	type VI secretion system protein TssL	NA	NA	NA	NA
WP_085546727.1\|177871_181780_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_028201324.1\|181969_182539_+	hypothetical protein	NA	NA	NA	NA
WP_080362472.1\|182603_185237_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.1e-35	26.0
WP_004523693.1\|185311_185581_+	PAAR motif protein	NA	NA	NA	NA
WP_004547811.1\|185593_189046_+	RHS repeat protein	NA	NA	NA	NA
WP_038718765.1\|188938_190297_-	hypothetical protein	A0A292GJ55	Xanthomonas_phage	9.0e-111	45.6
WP_004536657.1\|190329_191358_-	fimbrial protein	NA	NA	NA	NA
WP_009967433.1\|191412_192483_-	type VI secretion protein ImpA	NA	NA	NA	NA
WP_004544916.1\|192501_193551_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004523687.1\|193547_195428_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_2

726383 : 798045

Vibrio_phage(25.0%)

holin,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004525541.1\|726383_727151_-\|holin	phosphocholine cytidylyltransferase family protein	NA	NA	NA	NA
WP_004206084.1\|727189_728191_-	HpnL family protein	NA	NA	NA	NA
WP_038734825.1\|728187_728961_-	2OG-Fe(II) oxygenase	NA	NA	NA	NA
WP_004188272.1\|728957_729647_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_085546765.1\|730011_731526_+	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_076853326.1\|731495_731828_-	hypothetical protein	NA	NA	NA	NA
WP_004530037.1\|733235_734174_+	hypothetical protein	NA	NA	NA	NA
WP_004202234.1\|734207_734756_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004530038.1\|734752_736264_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004530039.1\|736407_736935_+	hypothetical protein	NA	NA	NA	NA
WP_004190879.1\|737014_737446_+	GPW/gp25 family protein	NA	NA	NA	NA
WP_004196180.1\|737459_739322_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004190851.1\|739318_740308_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_085546766.1\|740310_743181_+	type VI secretion system ATPase TssH	A0A2I7REQ1	Vibrio_phage	4.0e-60	27.2
WP_004536618.1\|743171_745463_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_085503230.1\|745628_747917_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004547074.1\|747920_750137_+	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_004525550.1\|750136_751207_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_004530790.1\|751209_751926_+	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_004190606.1\|751968_752358_+	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_004202226.1\|752363_752957_+	hypothetical protein	NA	NA	NA	NA
WP_004525552.1\|752953_754315_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_076852928.1\|754340_756056_+	OmpA family protein	NA	NA	NA	NA
WP_085513962.1\|756052_759556_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004190863.1\|759614_759974_+	hypothetical protein	NA	NA	NA	NA
WP_023358641.1\|760075_760366_+	hypothetical protein	NA	NA	NA	NA
WP_004530793.1\|760590_760962_+	hypothetical protein	NA	NA	NA	NA
WP_009967872.1\|761059_761233_-	hypothetical protein	NA	NA	NA	NA
WP_004524288.1\|761508_762408_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_004199051.1\|762494_762623_+	hypothetical protein	NA	NA	NA	NA
WP_011857650.1\|762630_763950_+	glycosyltransferase	NA	NA	NA	NA
WP_004524286.1\|763946_765533_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_004186828.1\|765779_766775_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_038724161.1\|766900_767083_+	hypothetical protein	NA	NA	NA	NA
WP_004528656.1\|767079_768663_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_004545880.1\|769389_770643_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_009967873.1\|771164_772829_-	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	4.1e-57	31.6
WP_004546670.1\|772961_774527_-	glycoside hydrolase 68 family protein	NA	NA	NA	NA
WP_004530800.1\|774715_775732_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_004523135.1\|776199_777399_+	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	8.4e-12	27.2
WP_004198247.1\|777576_778602_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_009923708.1\|778760_779024_+	hypothetical protein	NA	NA	NA	NA
WP_004530801.1\|779035_780310_+	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	5.3e-105	54.1
WP_004186989.1\|780382_781354_+	membrane dipeptidase	NA	NA	NA	NA
WP_004186987.1\|781504_782038_+	4-vinyl reductase	NA	NA	NA	NA
WP_004523137.1\|782098_784162_+	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_004186901.1\|784164_786090_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004523138.1\|786094_787267_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_004530055.1\|787263_788049_+	drug:proton antiporter	NA	NA	NA	NA
WP_004523139.1\|788073_789342_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_085546767.1\|789362_790508_+	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_004186918.1\|790617_791481_+	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004530057.1\|791661_793317_+	APC family permease	NA	NA	NA	NA
WP_004186920.1\|793403_794279_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_004523143.1\|794422_795322_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_025986125.1\|795457_797011_+\|holin	choline-sulfatase	NA	NA	NA	NA
WP_085546963.1\|797046_798045_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA

DBSCAN-SWA_3

1481079 : 1523161

Burkholderia_phage(93.33%)

tail,transposase,protease,terminase,plate,integrase

attL 1476066:1476085|attR 1523953:1523972

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1476066:1476085	attL	NA	NA	NA	NA
WP_004199327.1\|1481079_1481952_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_004199325.1\|1482163_1482868_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_085504368.1\|1483037_1484084_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_004199295.1\|1484753_1484912_+	lipoprotein	NA	NA	NA	NA
WP_004199294.1\|1484927_1485449_+	sigma-70 family RNA polymerase sigma factor	A0A076YQ50	Rhizobium_phage	5.1e-06	27.1
WP_004553369.1\|1485445_1486270_+	anti-sigma factor	NA	NA	NA	NA
WP_028201567.1\|1486327_1487314_+	YceI family protein	NA	NA	NA	NA
WP_004528277.1\|1487353_1487713_+	lipoprotein	NA	NA	NA	NA
WP_009967859.1\|1488155_1488590_-\|tail	tail assembly chaperone	A4JWL9	Burkholderia_virus	6.1e-45	78.3
WP_146978539.1\|1488603_1489890_-	hypothetical protein	A4JWL8	Burkholderia_virus	1.4e-126	62.0
WP_009967856.1\|1489901_1490498_-	DUF2313 domain-containing protein	B5TAB0	Burkholderia_phage	2.3e-58	60.7
WP_009967855.1\|1490497_1491619_-\|plate	baseplate J/gp47 family protein	B5TAA9	Burkholderia_phage	4.0e-149	71.3
WP_038721769.1\|1491615_1492203_-\|tail	tail protein	B5TAA8	Burkholderia_phage	5.3e-76	68.8
WP_009967851.1\|1492288_1492783_-\|plate	baseplate assembly protein	B5TAA7	Burkholderia_phage	4.5e-52	61.4
WP_009967850.1\|1492779_1493946_-	hypothetical protein	B5TAA6	Burkholderia_phage	8.9e-184	80.3
WP_038721767.1\|1493949_1495326_-	multidrug DMT transporter	B5TAA5	Burkholderia_phage	1.7e-194	75.3
WP_085507911.1\|1495325_1498001_-\|tail	phage tail protein	B5TAA4	Burkholderia_phage	4.0e-195	62.0
WP_009967847.1\|1498049_1498598_-	hypothetical protein	B5TAA3	Burkholderia_phage	2.6e-61	67.4
WP_038721765.1\|1498691_1499063_-	hypothetical protein	B5TAA2	Burkholderia_phage	1.6e-46	72.4
WP_009967845.1\|1499109_1500588_-\|tail	tail sheath protein	B5TAA1	Burkholderia_phage	8.9e-221	76.0
WP_009967844.1\|1500634_1500901_-	hypothetical protein	B5TAA0	Burkholderia_phage	3.1e-15	63.2
WP_009967842.1\|1500887_1501484_-	DUF1834 family protein	B5TA99	Burkholderia_phage	2.4e-47	48.2
WP_009967840.1\|1501483_1501918_-	virion morphogenesis protein	B5TA98	Burkholderia_phage	1.0e-55	76.4
WP_009967839.1\|1501914_1502418_-	DUF1320 domain-containing protein	B5TA97	Burkholderia_phage	1.5e-87	91.6
WP_038721772.1\|1502414_1502816_-	hypothetical protein	B5TA96	Burkholderia_phage	2.5e-16	75.8
WP_009967836.1\|1502889_1503837_-	hypothetical protein	B5TA95	Burkholderia_phage	5.6e-168	94.0
WP_009967834.1\|1503888_1504245_-	hypothetical protein	B5TA94	Burkholderia_phage	1.1e-41	77.1
WP_009967832.1\|1504289_1505438_-	hypothetical protein	B5TA92	Burkholderia_phage	9.1e-181	82.8
WP_009967831.1\|1505653_1506055_-	hypothetical protein	B5TA91	Burkholderia_phage	1.7e-62	89.5
WP_009967830.1\|1506051_1506486_-	regulatory protein GemA	B5TA90	Burkholderia_phage	6.3e-58	81.1
WP_009967829.1\|1506487_1506799_-	hypothetical protein	B5TA89	Burkholderia_phage	1.0e-30	64.6
WP_009967827.1\|1506950_1507268_-	hypothetical protein	B5TA88	Burkholderia_phage	3.7e-07	76.5
WP_009967826.1\|1507356_1507629_-	HU family DNA-binding protein	B5TA87	Burkholderia_phage	2.6e-33	85.6
WP_009967825.1\|1507692_1508085_-	ASCH domain-containing protein	B5TA86	Burkholderia_phage	2.3e-59	83.1
WP_009967824.1\|1508098_1508725_-	DUF3164 family protein	B5TA85	Burkholderia_phage	9.6e-100	89.9
WP_085546816.1\|1508721_1509309_-	hypothetical protein	B5TA84	Burkholderia_phage	3.1e-84	92.4
WP_038721762.1\|1509295_1509601_-	hypothetical protein	B5TA83	Burkholderia_phage	6.4e-33	73.3
WP_009967822.1\|1509597_1509786_-	hypothetical protein	B5TA82	Burkholderia_phage	7.7e-13	63.8
WP_009967820.1\|1509793_1510786_-	AAA family ATPase	B5TA81	Burkholderia_phage	3.9e-180	97.0
WP_038721760.1\|1510795_1512421_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	B5TA80	Burkholderia_phage	6.6e-302	95.2
WP_085546817.1\|1512460_1513507_-	hypothetical protein	B5TA79	Burkholderia_phage	4.9e-125	72.7
WP_009927791.1\|1513503_1513695_-	DNA-binding protein	B5TA78	Burkholderia_phage	2.7e-21	89.3
WP_038721759.1\|1513776_1514262_+	helix-turn-helix transcriptional regulator	B5TA77	Burkholderia_phage	3.4e-52	71.3
WP_009967816.1\|1514305_1514839_+	hypothetical protein	B5TA76	Burkholderia_phage	1.5e-66	74.0
WP_009967814.1\|1515202_1515685_+	DUF2778 domain-containing protein	NA	NA	NA	NA
WP_009967812.1\|1515681_1515954_+	hypothetical protein	NA	NA	NA	NA
WP_038721770.1\|1516073_1516385_+	membrane protein	B5TA74	Burkholderia_phage	4.4e-37	70.2
WP_009967808.1\|1516381_1517056_+	lytic transglycosylase domain-containing protein	B5TA73	Burkholderia_phage	2.2e-89	81.2
WP_038721757.1\|1517624_1517846_+	hypothetical protein	B5TA71	Burkholderia_phage	1.9e-31	89.0
WP_009927781.1\|1517842_1518133_+	hypothetical protein	B5TA70	Burkholderia_phage	1.3e-40	89.6
WP_009967806.1\|1518136_1518634_+	DUF1804 family protein	B5TA69	Burkholderia_phage	8.4e-83	95.2
WP_009967805.1\|1518640_1520257_+\|terminase	phage terminase large subunit	B5TA68	Burkholderia_phage	1.4e-304	92.6
WP_038721755.1\|1520246_1521776_+	DUF935 family protein	B5TA67	Burkholderia_phage	4.4e-247	88.0
WP_009967802.1\|1521928_1523161_+	hypothetical protein	B5TA65	Burkholderia_phage	6.1e-215	88.5
1523953:1523972	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2875160 : 2960817

Stx2-converting_phage(20.0%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004539275.1\|2875160_2875889_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.2e-21	31.2
WP_025986261.1\|2876102_2877857_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_071811408.1\|2878105_2878471_+	hypothetical protein	NA	NA	NA	NA
WP_129112169.1\|2878438_2878744_-	hypothetical protein	NA	NA	NA	NA
WP_085546920.1\|2878744_2888113_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_076849157.1\|2888264_2888462_-	hypothetical protein	NA	NA	NA	NA
WP_085546983.1\|2889318_2893950_-	type IV secretion protein Rhs	A0A2H4JFP5	uncultured_Caudovirales_phage	8.3e-23	34.9
WP_004524859.1\|2893963_2895232_-	hypothetical protein	NA	NA	NA	NA
WP_009935222.1\|2895247_2897452_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.7e-42	28.0
WP_009969392.1\|2898908_2899805_-	DUF1016 family protein	A0A0U2BZN7	Salmonella_phage	3.6e-23	43.4
WP_009982075.1\|2900911_2901379_+	decarboxylase	NA	NA	NA	NA
WP_009969395.1\|2901534_2902560_+	hypothetical protein	NA	NA	NA	NA
WP_009982076.1\|2903123_2903723_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_004524853.1\|2903747_2904158_-	RidA family protein	NA	NA	NA	NA
WP_076853184.1\|2904272_2905328_-	asparaginase	NA	NA	NA	NA
WP_004544583.1\|2905563_2906196_+	hypothetical protein	NA	NA	NA	NA
WP_123850111.1\|2907428_2907647_-\|transposase	transposase	A0A2L1IVA1	Escherichia_phage	4.0e-05	62.5
WP_004524850.1\|2908230_2908668_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_076831005.1\|2909406_2909592_-	hypothetical protein	NA	NA	NA	NA
WP_004540470.1\|2909567_2909714_+	hypothetical protein	NA	NA	NA	NA
WP_009969402.1\|2909904_2910984_-	porin	NA	NA	NA	NA
WP_011205726.1\|2911395_2912835_-	aldehyde dehydrogenase (NADP(+))	NA	NA	NA	NA
WP_025986264.1\|2913035_2914220_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_004557911.1\|2914230_2915127_-	aldose 1-epimerase	NA	NA	NA	NA
WP_009969404.1\|2915120_2915891_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_004544686.1\|2915905_2916769_-	sugar ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.9e-13	25.4
WP_004524842.1\|2916765_2917734_-	ABC transporter permease	NA	NA	NA	NA
WP_004524841.1\|2917754_2918753_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004524840.1\|2918790_2919993_-	mandelate racemase/muconate lactonizing enzyme family protein	Q6A202	Oenococcus_phage	6.9e-46	31.9
WP_004557914.1\|2920003_2920717_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_004544619.1\|2920848_2921739_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_011205728.1\|2922180_2922810_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.4e-27	38.1
WP_085546921.1\|2922817_2924380_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.5e-149	53.7
WP_004524834.1\|2924409_2924757_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.6e-40	72.9
WP_004524833.1\|2924753_2925161_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	3.2e-11	36.5
WP_009969406.1\|2925593_2927627_-	hypothetical protein	NA	NA	NA	NA
WP_004546333.1\|2927867_2930039_-	alpha-galactosidase	NA	NA	NA	NA
WP_004524829.1\|2930043_2930895_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_004544732.1\|2930895_2931849_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_004524827.1\|2931881_2933123_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_004524825.1\|2933158_2934403_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.1e-22	32.8
WP_004553674.1\|2934445_2936506_-	hypothetical protein	NA	NA	NA	NA
WP_009927050.1\|2936856_2937915_-	LacI family transcriptional regulator	NA	NA	NA	NA
WP_085546922.1\|2939728_2940514_+	hypothetical protein	NA	NA	NA	NA
WP_076838784.1\|2943856_2944423_-	suppressor of fused domain protein	NA	NA	NA	NA
WP_071811399.1\|2944424_2944679_-	hypothetical protein	NA	NA	NA	NA
WP_004544694.1\|2944682_2945084_-	VENN motif pre-toxin domain-containing protein	NA	NA	NA	NA
WP_076851816.1\|2949367_2950519_+	hypothetical protein	NA	NA	NA	NA
WP_085546923.1\|2950606_2950858_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_085508576.1\|2951822_2952341_-\|transposase	transposase	S5WIU1	Leptospira_phage	4.3e-21	53.1
WP_038719067.1\|2951955_2953806_-	RHS repeat protein	NA	NA	NA	NA
WP_004533449.1\|2953765_2954476_-	hypothetical protein	NA	NA	NA	NA
WP_071811397.1\|2954491_2956696_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.3e-45	29.9
WP_085546924.1\|2956692_2959359_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	4.0e-78	30.6
WP_154822116.1\|2959371_2960817_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018389

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018389_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018389_1

3431657-3431850

Orphan

Consensus_repeat	Method
CTTCGATGCCTTCGGTGCCTTCGGTGCCTTCG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP018389_1

>merge|NZ_CP018389|1|3431657-3431850|CRISPRCasFinder
CTTCGGTGGCTTCGACGGCTTCGGTGGCTTCGATGCCTTCGGCGGCTTCGATGCCTTCGGTGCCTTCGGTGCCTTCGGTGCCTTCGGTGCCTTCGGTGCCTTCGGTGCCTTCGGTGCCTTCGGTGCCTTCGGTGCCTTCGACAATCTCACCGTCTTCGGAGTTTTCGCAGCCTCCGTCGCCTTCCTTTCCTTTG

>NZ_CP018389|1|1|3431657-3431850|CRISPRCasFinder
CTTCGGTGGCTTCGACGGCTTCGGTGGCTTCG	ATGCCTTCGGCGGCTTCGATGC
CTTCGGTGCCTTCGGTGCCTTCGGTGCCTTCG	GTGCCTTCGGTGCCTTCGGTGC
CTTCGGTGCCTTCGGTGCCTTCGGTGCCTTCG	ACAATCTCACCGTCTTCGGAGT
TTTCGCAGCCTCCGTCGCCTTCCTTTCCTTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018389.1\|WP_004522532.1\|3428464_3429223_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235975
NZ_CP018389.1\|WP_085546618.1\|3439944_3440658_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|185029
NZ_CP018389.1\|WP_004193987.1\|3436414_3436753_+\|P-II-family-nitrogen-regulator	unknown	unknown	gnl\|CDD\|366157
NZ_CP018389.1\|WP_011325270.1\|3442725_3443424_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|380375
NZ_CP018389.1\|WP_004526333.1\|3425759_3426950_+\|heme-biosynthesis-protein-HemY	unknown	unknown	gnl\|CDD\|273126
NZ_CP018389.1\|WP_009980222.1\|3433351_3434530_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|377314
NZ_CP018389.1\|WP_004522539.1\|3418312_3419068_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP018389.1\|WP_004191560.1\|3419475_3422460_-\|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl\|CDD\|234570
NZ_CP018389.1\|WP_004534273.1\|3437171_3438272_-\|porin	unknown	unknown	gnl\|CDD\|238208
NZ_CP018389.1\|WP_004522531.1\|3430911_3431439_+\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|179262
NZ_CP018389.1\|WP_009969767.1\|3434650_3436354_+\|NAD+-synthase	unknown	unknown	gnl\|CDD\|237577
NZ_CP018389.1\|WP_004531968.1\|3427118_3428426_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP018389.1\|WP_004199404.1\|3422572_3422752_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018389.1\|WP_004193185.1\|3422786_3423776_+\|hydroxymethylbilane-synthase	unknown	unknown	gnl\|CDD\|234612
NZ_CP018389.1\|WP_004192946.1\|3439142_3439910_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226961
NZ_CP018389.1\|WP_004193146.1\|3423775_3425755_+\|fused-uroporphyrinogen-III-synthase-HemD/membrane-protein-HemX	unknown	unknown	gnl\|CDD\|235899
NZ_CP018389.1\|WP_004522525.1\|3440654_3441344_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|185089
NZ_CP018389.1\|WP_009969764.1\|3432585_3433200_+\|beta-glucosidase	unknown	unknown	gnl\|CDD\|185053
NZ_CP018389.1\|WP_085546616.1\|3429311_3430751_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143427
NZ_CP018389.1\|WP_004198602.1\|3441554_3442331_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270421

Protein	Function_ID	Function_description	E-value
NZ_CP018389.1\|WP_004522532.1\|3428464_3429223_-\|SDR-family-oxidoreductase	gnl\|CDD\|235975	PRK07231, FabG-like, SDR family oxidoreductase.	5.14693e-137
NZ_CP018389.1\|WP_085546618.1\|3439944_3440658_-\|ABC-transporter-permease	gnl\|CDD\|185029	PRK15069, PRK15069, histidine ABC transporter permease HisM.	3.37176e-163
NZ_CP018389.1\|WP_004193987.1\|3436414_3436753_+\|P-II-family-nitrogen-regulator	gnl\|CDD\|366157	pfam00543, P-II, Nitrogen regulatory protein P-II. P-II modulates the activity of glutamine synthetase.	1.39283e-55
NZ_CP018389.1\|WP_011325270.1\|3442725_3443424_+\|pirin-family-protein	gnl\|CDD\|380375	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain. This family includes the N-terminal cupin domains of YhhW and YhaK, Escherichia coli pirin-like proteins with unknown function. YhhW is structurally similar not only to human pirin but also to quercitin 2,3-dioxygenase (quercitinase). Although the function of YhhW is not completely understood, YhhW and its human ortholog have quercitinase activity and are likely to play an important role in transcription and apoptosis. This N-terminal cupin domain of YhhW has a metal coordination site and is thought to have catalytic activity while the C-terminal cupin-like domain has diverged considerably and has closer alignment with C-terminal pirin. YhaK is found in low abundance in the cytosol of E. coli and is strongly up-regulated by nitroso-glutathione (GSNO). There are major structural differences at the N-terminus of YhaK compared with YhhW; YhaK lacks the canonical cupin metal-binding residues of pirins and may be involved in chloride binding and/or sensing of oxidative stress in enterobacteria. YhaK showed no quercetinase and peroxidase activity; however, reduced YhaK was very sensitive to reactive oxygen species (ROS). Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	5.01337e-78
NZ_CP018389.1\|WP_004526333.1\|3425759_3426950_+\|heme-biosynthesis-protein-HemY	gnl\|CDD\|273126	TIGR00540, TPR_hemY_coli, heme biosynthesis-associated TPR protein. Members of this protein family are uncharacterized tetratricopeptide repeat (TPR) proteins invariably found in heme biosynthesis gene clusters. The absence of any invariant residues other than Ala argues against this protein serving as an enzyme per se. The gene symbol hemY assigned in E. coli is unfortunate in that an unrelated protein, protoporphyrinogen oxidase (HemG in E. coli) is designated HemY in Bacillus subtilis. [Unknown function, General].	4.7326e-120
NZ_CP018389.1\|WP_009980222.1\|3433351_3434530_-\|N-acetyltransferase	gnl\|CDD\|377314	pfam04339, FemAB_like, Peptidogalycan biosysnthesis/recognition. FemAB_like is a family of both baterial and Viridiplantae proteins with responsibility for building interpeptide bridges in peptidoglycan. Such a function is feasible for bacteria but less likely for the plant members of this family. Perhaps the plant-members are using homologous proteins to recognize bacterial peptidoglcans as part of their innate immune system.	0
NZ_CP018389.1\|WP_004522539.1\|3418312_3419068_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.43078e-26
NZ_CP018389.1\|WP_004191560.1\|3419475_3422460_-\|phosphoenolpyruvate-carboxylase	gnl\|CDD\|234570	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed.	0
NZ_CP018389.1\|WP_004534273.1\|3437171_3438272_-\|porin	gnl\|CDD\|238208	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane. Individual 16-strand anti-parallel beta-barrels form a central pore, and trimerizes thru mainly hydrophobic interactions at the interface. Trimers are stabilized by hytrophillic clamping of Loop L2. Loop 3 bends into the pore, creating an elliptical constriction of about 7 x 11A, large enough to allow passage of a glucose molecule without steric hindrance. Removal of the C-terminal residue (usuallly F) destabilizes the trimer and removal of the 16th beta-sheet abolishes trimerization. Unlike typical membrane proteins, porins lack long hydrophobic stretches. Short turns are found at the smooth, periplasmic end, longer irregular loops are found at the rough, extracellular end. C-terminal residue forms salt bridge with N-terminus.	1.93053e-65
NZ_CP018389.1\|WP_004522531.1\|3430911_3431439_+\|inorganic-diphosphatase	gnl\|CDD\|179262	PRK01250, PRK01250, inorganic diphosphatase.	1.23775e-114
NZ_CP018389.1\|WP_009969767.1\|3434650_3436354_+\|NAD+-synthase	gnl\|CDD\|237577	PRK13981, PRK13981, NAD synthetase; Provisional.	0
NZ_CP018389.1\|WP_004531968.1\|3427118_3428426_-\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.79565e-100
NZ_CP018389.1\|WP_004193185.1\|3422786_3423776_+\|hydroxymethylbilane-synthase	gnl\|CDD\|234612	PRK00072, hemC, porphobilinogen deaminase; Reviewed.	3.39289e-158
NZ_CP018389.1\|WP_004192946.1\|3439142_3439910_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226961	COG4598, HisP, ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism].	1.92846e-161
NZ_CP018389.1\|WP_004193146.1\|3423775_3425755_+\|fused-uroporphyrinogen-III-synthase-HemD/membrane-protein-HemX	gnl\|CDD\|235899	PRK06975, PRK06975, bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed.	0
NZ_CP018389.1\|WP_004522525.1\|3440654_3441344_-\|ABC-transporter-permease-subunit	gnl\|CDD\|185089	PRK15135, PRK15135, histidine ABC transporter permease HisQ.	4.18901e-109
NZ_CP018389.1\|WP_009969764.1\|3432585_3433200_+\|beta-glucosidase	gnl\|CDD\|185053	PRK15098, PRK15098, beta-glucosidase BglX.	6.80418e-14
NZ_CP018389.1\|WP_085546616.1\|3429311_3430751_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143427	cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.	0
NZ_CP018389.1\|WP_004198602.1\|3441554_3442331_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270421	cd13703, PBP2_HisJ_LAO, Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold. This subgroup includes the periplasmic-binding proteins, HisJ and LAO, that serve as initial receptors in the ABC transport of histidine and lysine-arginine-ornithine amino acids. They are belong to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.0768e-128

>NZ_CP018389.1|WP_004522531.1|3430911_3431439_+|inorganic-diphosphatase
MSFSNVPAGKDLPQDFNVIIEIPAQSEPVKYEADKALGLLVVDRFIGTGMRYPVNYGFIPQTLSGDGDPVDVLVITPFPLLAGSVVRARALGMLKMTDESGVDAKLVAVPHDKVCPMTANLKSIDDVPAYLKDQIKHFFEQYKALEKGKWVKVEGWDGIDAAHKEITDGVANFKK
>NZ_CP018389.1|WP_085546616.1|3429311_3430751_-|aldehyde-dehydrogenase-family-protein
MEEAKHFIAGAWAPPAGGETIAVIDPSDGEPFARLARGTAPDVGAAVQAARAAFDGPWGALGAADRGRMLYRLSMLVAACREELALIESRDTGKPLTQARADADALARYLEFYAGAADKLHGETLPYRDGYTVLTLREPHGVTGHIVPWNYPMQILGRSVGAALAAGNACVVKPSEDACLSILRVATLAAEAGLPEGAFNVVTGYGHEAGAALARHPGVDHLSFTGSPDTGRLVAQMAAEHHASVTLELGGKSPQIVFADADLDAALPVLVSAIVQNAGQTCSAGSRVLIDKAVYEPLVERLAAAFNGLKVGPGRADLDCGPLINAKQQQRVWDFLSDAQHDGIAMAAHGQVVPDAPETGFYQAPALLRDVPHTHRLAQEEVFGPVLAAMPFADEDKALALANGTPFGLVAGIWTRDGARQMRLARKVRAGQVFVNNYGAGGGVELPFGGTGRSGYGREKGFEALYGFTVLKTIALRHG
>NZ_CP018389.1|WP_004522532.1|3428464_3429223_-|SDR-family-oxidoreductase
MRLSGKTAVVTGAGSGFGEGIAKTFAREGACVVVNDLHAAAAERVASEIALAGGRALAVAGDVSRGEDWQALRDAALAAFGSVQVVVNNAGTTHRNKPVLDITEAEYDRVYAINMKSLFWSVQTFVPYFRGAGGGAFVNIASTAAVRPRPGLVWYNSTKGAMLTASKTLAAELGADRIRVNCVNPVLGETGLTSEFMGVPDTPENRARFVATIPLGRLSTPQDVANAALYLASDEAAFVTGACLEVDGGRCV
>NZ_CP018389.1|WP_004531968.1|3427118_3428426_-|MFS-transporter
MASTLPATTPDAPSAFEAATYRKVSWRLAPLLLLCYVVAYLDRVNVGFAKLQMAADLHLSDAVYGLGAGIFFIGYFLFEVPSNVILHKVGARVWIARIMVTWGIISALTMFVSTPAMFYTMRFLLGVAEAGFFPGVILYLTYWYPAHRRGRMTTLFMTAVALSGVVGGPISGYILKTFDGMNGWRGWQWLFLLEGVPSVLVGILLLFALDDGIAKAKWLDGDEKALLSRNVAAEEARKEDLPLSAVFASPRVWLMGFIYFSFVMGLYGVGFWLPTIIKSTGVTDAFAIGLLSAVPYAAAVVAMLAVARSADRRRERRWHLAIPAAAGALGLVLSVVWAHDTLLAMLGLTIATMGILTTLPLFWSLPTAFLGGTAAAAGIAIINSVGNLAGFLSPYLVGWLKQASASNAAGMYMLAGFLVLGGLLALTVPKSLVDI
>NZ_CP018389.1|WP_004526333.1|3425759_3426950_+|heme-biosynthesis-protein-HemY
MTLRGIIWLAVLFAIAAALATVGRFDTGQVLIVYPPYRIDVSLNFFVLAIIVAFIVLYALMRIVRNVWRMPQRVAAYRARMRNERAQAALRDALANLYAGRFSRAEKAARDALAVDANQSAASLVAAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGRDAEGALAALAEMQASGGKRIHAQQIALRAQQQNKNWAEVLKIAKALEKREALHPAAAVRLRQQAAEHLLRDRRHDADALLEVWQSLSAAERQSPRLADLAAELLIALERRQEARRIVEDALAHNWNARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESALKLADDEPLRIRAHRALARLFEHLGETDKAAQHYRESALAITVV
>NZ_CP018389.1|WP_004193146.1|3423775_3425755_+|fused-uroporphyrinogen-III-synthase-HemD/membrane-protein-HemX
MAGAPRTFTAVLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNAVDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESLFAEIARAFDGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAWERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARALGFDRITLTGAGDERIVRAFRTLADQADQPATAAPMPSRMTDTNDTKDVSSKPAAAPVAPPNQPFTPFETKERRGAASAALWFVVVVIAAAAGVGGYALNRKVDRLDQHATERQKALDAQTAELRTKTEQALASVRQADSQLSQLEGKLADAQTAQTALQQQYQDLSRNRDAWMIEEVGQMLSSASQQLLLTGNTQLALIALQNADARLASSQSAQAVVVRKAIAQDIERLKAAPSADLTGLAIKLDDAIAKVDTLPLAGEVLAPHAQAKPDAAASARQAAAAAGEPRWKAWWRGFSAGIGEQLKSLVEVRRIDHADAMLASPEQGYFVRENVKLRLLSARLSLLARDDGAMKSDLHAAQAAVARYFDGASKDTRVVQDLLKQVDAASLTVAVPNLNTSLNAVQQFKSRG
>NZ_CP018389.1|WP_004193185.1|3422786_3423776_+|hydroxymethylbilane-synthase
MNSETLPAELPATLTIASRESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGARAIVDALVAASAQAQKGGA
>NZ_CP018389.1|WP_004199404.1|3422572_3422752_+|hypothetical-protein
MKPDDAANDAAGDAAANRTRWRMPDAFSNRTAVRDLDADRTGRSRSPPGGRARKVRVLP
>NZ_CP018389.1|WP_004191560.1|3419475_3422460_-|phosphoenolpyruvate-carboxylase
MKSSGSARATRRNAVSSSSAPAHAEPPARRAAKPARKLDGAAARPLAPTNAASAKPQGRTREDKDRPLFEDIRYLGRLLGDVVREQEGDAVFDVVETIRQTAVKFRREDDKAAAQTLEKMLRKLTPEQTVSVVRAFSYFSHLANIAEDRHHNRRRRIHALAGSAAQAGTVAYALDKLKQAGDASSKTIKQFFEGALIVPVLTAHPTEVQRKSILDAQHDIARLLAERDQPLTARELAHNEALLRARVTTLWQTRMLRDARLTVADEIENALSYYRATFLDELPALYADIEEALAEHGLRARVPAFFQMGSWIGGDRDGNPNVTAATLDEAISRQAAVIFEHYLEQVHKLGAELSVSNLLVGASDALKALAAASPDQSPHRVDEPYRRALIGVYTRLAASARVRLGEGTVPVRSAGRGAAPVRATPYADAEEFAADLRVLTDSLALHHGESLATPRLAPLMRAAEVFGFHLASIDLRQSSDIHEAVVAELLARGGVEADYAALPEADKLRVLLAALADPRPLRSPYLDYSDLAKSELGVLERAHAIRAQFGARAVRNYIISHTETVSDLVEVLLLQKETGLFEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLAHQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGGPTYQAILSQPPGTVNGQIRLTEQGEVIASKFANPEIGRRNLETVVAATLEATLAPHSNAPKQLPAFEAAMQTLSDAAMASYRALVYETPGFTDYFFSSTPITEIAELNIGSRPASRKLQDPKNRKIEDLRAIPWGFSWGQCRLLLTGWYGFGSAVAAYLDGAPDAAERGKRVALLKKMNKTWPFFANLLSNMDMVLAKTDLAVASRYAQLVADKKLRKHVFERIVAEWHRTADALAEITGAHARLAANPLLARSIKNRFPYLDPLNHLQVELIKRHRAGDTNARLRRGIHLTINGIAAGLRNTG
>NZ_CP018389.1|WP_004522539.1|3418312_3419068_+|class-I-SAM-dependent-methyltransferase
MKHHDRVADAFGTTASAYLTSAVHATGADLDTFAAEIGATPGARVLDLGCGAGHASFAAARGGAHEVIAYDLAPQMLATVEAAARERGLSNVRIEQGAAERLPFADASFDWIVSRMSAHHWHGVPRALAEARRVLKPGGRVLFVDVAGADHPLADTHLQAVEVLRDASHVRDYRVDEWLAFFAQAGFAARVRERWRLSIGFDGWVARMRTPDVRAHAIRALWADAPDEVRAYFDVQPDGSFKLDVVMIDAR
>NZ_CP018389.1|WP_009969764.1|3432585_3433200_+|beta-glucosidase
MERQRLVMQPPAQRPARDREAFAGDANPSGKLPITFARKAADLPQPAIDPASLRTVYGEGLMIGYRWYDATNVQPLFPFGVGLPYTTFVYSGMSAQAGAAGNVTVGFTVTNTGARGRGSRADLCGAARRARRAAAAARRPGEGRAAAGPGAARRRHDCGETLRDLGRGRARVAVECGSYRLSVAASSRDPNALSQPGSFNGARL
>NZ_CP018389.1|WP_009980222.1|3433351_3434530_-|N-acetyltransferase
MKHERRDYRMGILTSVLDASAAEWDALVARAPRPTPFLKHAFLSALHRAGCATDGTGWTPRFVTLADSATDALVAAAPVYAKRHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQGSRLLAVDDDARRRLAATLVALAEQSDVSSLHVLFPTGDEARALADMGMMLREGVQFHWLNDGYRDFDAFLGTLEQKKRKNIRAERRKVADAGVTLRRVRGEDATDADWRFFARCYRQTYREHFSSPYLNLEFFREIGATMPENLLLVIAERDGRPIASALAVYQRGEAGGGTLYGRYWGALEHVPCLHFETAYYQLLEFCLEERLDTFEGGAQGEHKLARGFMPTVTHSAHWLAHPAFADAVGHFLAQETNQIHAYVDELREHNPFRAGER
>NZ_CP018389.1|WP_009969767.1|3434650_3436354_+|NAD+-synthase
MKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPAFYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGGAAASSADGNANRPIERGAAPVDTYNAASLIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVWHASAAQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLDGAGELVAKMPQFEEGHAIVEFDGARALPAPIAPALPVEAQVYRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGALDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESID
>NZ_CP018389.1|WP_004193987.1|3436414_3436753_+|P-II-family-nitrogen-regulator
MKRITAIIKPFKLDEVREALAEVGLTGLTVTEVKGFGRQKGHTELYRGAEYVVDFLPKMKIEVVVANNLVDQVIDAVIGAARTGKIGDGKIFVSDVERVIRIRTGEENEAAV
>NZ_CP018389.1|WP_004534273.1|3437171_3438272_-|porin
MEEMMKKVMLAAVLATAGVAAHAQSSVTLYGRLDAGIEYMNGLPSANGGSTSRWRAESGNWGTSLWGLKGSEDIGGGNKIVFQLEGSFDTMNGNGPGAGSIWNRWATIGISNDTYGTLLLGRELAIANGVWDFDPFGQSSWSTASLVRGRNWNKTSNNISYQSPKFYGFDVYGQYALSNATNWNGNGSTSQGRSAGLQLTYTTSLFQIRGLYDEARDPANGKLDDVFNYSREYFAGVNVFLGQFKLQAAYQASHADGGPVVNNGITTTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIFTVGGSYNLSKRTLLDVQVATVRNSKTANFGLNANPAGTDISTGNPKFGGSQTGVYAGIQHLF
>NZ_CP018389.1|WP_004192946.1|3439142_3439910_-|ABC-transporter-ATP-binding-protein
MHKLFVDDLHKRYGNNEVLKGVSLRANAGDVISVIGSSGSGKSTMLRCINFLEQPNAGRIFVDGEEVRTAQDRTGALKAADSKQLRRVRTKLAMVFQHFNLWAHMNVLENVMEAPVHVLGITKREAQERAREYLEKVGLAPRVETQYPSHLSGGQQQRVAIARALAMHPDVMLFDEPTSALDPELVGEVLKVMQKLAEEGRTMIVVTHEMGFARNVSNHVMFLHQGRVEEEGAPADVFGATKSERLRQFLSGSLK
>NZ_CP018389.1|WP_085546618.1|3439944_3440658_-|ABC-transporter-permease
MIELIQEYWRNYLYTDGYRFTGLAITMWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVWLYTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMSTFTLYRRIVLPSALRRALPLYSNEVILMLHATTIAFTATVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRRAERRWLAYLRPQGK
>NZ_CP018389.1|WP_004522525.1|3440654_3441344_-|ABC-transporter-permease-subunit
MFLQGYGPLILSGTWQTVKLAVLSLALSFLLGLVGAAAKLSRNRVSNGIGTLYTTLIRGVPDLVLMLLLFYSLQIWLNQLTDLMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVFARVMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVKASQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRKADL
>NZ_CP018389.1|WP_004198602.1|3441554_3442331_-|ABC-transporter-substrate-binding-protein
MKKLALCAALALAAGGAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRINAKCTWTPQDLDGIIPALKAKKFDVIVSSLTVTDKRREQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVGVEQGSTQETFAKAHWEPKGVTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTPRGKGFAWAGPAVKDPRTLGDGTAMGLRKEDADLKDAINRALASMHKDGTYDRLSRKYFPYSVYSAK
>NZ_CP018389.1|WP_011325270.1|3442725_3443424_+|pirin-family-protein
MFEIRRAGDRGHADHGWLDTHHSFSFADYRDPEHMYFGALRVLNDDRIAPTRGFGMHPHRDMEIVTYVLEGALAHRDSMGNGSIVRAGDVQRMSAGTGIVHSEYNASCDAPLHLLQIWLLPVEPGGRPGYQEARFTDADKRGRLRLVASPDGRDGAVTVRADASIYAGLVDGDERAEFAPPAGRRAYVHVARGCVVVNGEVLAAGDGARIAEVGRVVFERGERAEVLLFDLA

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018389_1	1.2\|3431743\|22\|NZ_CP018389\|CRISPRCasFinder	3431743-3431764	22	MF140416	Mycobacterium phage LastHope, complete genome	6359-6380	1	0.955
NZ_CP018389_1	1.2\|3431743\|22\|NZ_CP018389\|CRISPRCasFinder	3431743-3431764	22	MT114163	Mycobacterium phage Settecandela, complete genome	64638-64659	1	0.955
NZ_CP018389_1	1.2\|3431743\|22\|NZ_CP018389\|CRISPRCasFinder	3431743-3431764	22	MK937592	Mycobacterium phage Phrappuccino, complete genome	64638-64659	1	0.955
NZ_CP018389_1	1.1\|3431689\|22\|NZ_CP018389\|CRISPRCasFinder	3431689-3431710	22	NC_011758	Methylorubrum extorquens CM4 plasmid pCMU01, complete sequence	379897-379918	2	0.909
NZ_CP018389_1	1.2\|3431743\|22\|NZ_CP018389\|CRISPRCasFinder	3431743-3431764	22	NC_042031	Mycobacterium phage Anaya, complete sequence	7332-7353	2	0.909
NZ_CP018389_1	1.2\|3431743\|22\|NZ_CP018389\|CRISPRCasFinder	3431743-3431764	22	NC_042031	Mycobacterium phage Anaya, complete sequence	7341-7362	2	0.909
NZ_CP018389_1	1.2\|3431743\|22\|NZ_CP018389\|CRISPRCasFinder	3431743-3431764	22	MF347636	Streptomyces phage NootNoot, complete genome	102732-102753	3	0.864

1. spacer 1.2|3431743|22|NZ_CP018389|CRISPRCasFinder matches to MF140416 (Mycobacterium phage LastHope, complete genome) position: , mismatch: 1, identity: 0.955

gtgccttcggtgccttcggtgc	CRISPR spacer
gtgccttcggtgccgtcggtgc	Protospacer
************** *******

2. spacer 1.2|3431743|22|NZ_CP018389|CRISPRCasFinder matches to MT114163 (Mycobacterium phage Settecandela, complete genome) position: , mismatch: 1, identity: 0.955

gtgccttcggtgccttcggtgc	CRISPR spacer
gtgccttcggtgacttcggtgc	Protospacer
************ *********

3. spacer 1.2|3431743|22|NZ_CP018389|CRISPRCasFinder matches to MK937592 (Mycobacterium phage Phrappuccino, complete genome) position: , mismatch: 1, identity: 0.955

gtgccttcggtgccttcggtgc	CRISPR spacer
gtgccttcggtgacttcggtgc	Protospacer
************ *********

4. spacer 1.1|3431689|22|NZ_CP018389|CRISPRCasFinder matches to NC_011758 (Methylorubrum extorquens CM4 plasmid pCMU01, complete sequence) position: , mismatch: 2, identity: 0.909

atgccttcggcggcttcgatgc	CRISPR spacer
ttgcctccggcggcttcgatgc	Protospacer
 *****.***************

5. spacer 1.2|3431743|22|NZ_CP018389|CRISPRCasFinder matches to NC_042031 (Mycobacterium phage Anaya, complete sequence) position: , mismatch: 2, identity: 0.909

gtgccttcggtgccttcggtgc	CRISPR spacer
gtgccttcggtgccttcggtcg	Protospacer
********************

6. spacer 1.2|3431743|22|NZ_CP018389|CRISPRCasFinder matches to NC_042031 (Mycobacterium phage Anaya, complete sequence) position: , mismatch: 2, identity: 0.909

gtgccttcggtgccttcggtgc	CRISPR spacer
ccgccttcggtgccttcggtgc	Protospacer
 .********************

7. spacer 1.2|3431743|22|NZ_CP018389|CRISPRCasFinder matches to MF347636 (Streptomyces phage NootNoot, complete genome) position: , mismatch: 3, identity: 0.864

gtgccttcggtgccttcggtgc	CRISPR spacer
cgaccttcggtgccttcggtgc	Protospacer
  .*******************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

705164 : 714602

Burkholderia_virus(44.44%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011325645.1\|705164_706187_+	class II histone deacetylase	A0A2K9L2T7	Tupanvirus	3.8e-37	31.6
WP_004193371.1\|706381_707005_+	phospholipase D family protein	NA	NA	NA	NA
WP_009951345.1\|707001_707439_+	hypothetical protein	NA	NA	NA	NA
WP_085546465.1\|708204_708741_+	avidin	NA	NA	NA	NA
WP_085962187.1\|708757_709991_+\|transposase	IS3-like element ISButh1 family transposase	A0A1B0Z042	Pseudomonas_phage	3.1e-102	65.2
WP_004527234.1\|710121_710355_+	hypothetical protein	A4PE26	Ralstonia_virus	4.3e-13	60.6
WP_004531416.1\|710390_710618_-	hypothetical protein	Q8W6S4	Burkholderia_virus	3.8e-22	75.8
WP_004557051.1\|710871_711267_+	hypothetical protein	NA	NA	NA	NA
WP_028200808.1\|711547_711970_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	9.2e-14	48.3
WP_028200809.1\|711966_712473_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	1.0e-19	40.9
WP_071810609.1\|712814_713417_+	hypothetical protein	NA	NA	NA	NA
WP_076804729.1\|713837_714149_+	hypothetical protein	A4PE26	Ralstonia_virus	4.5e-26	60.2
WP_071897863.1\|714169_714355_-	hypothetical protein	Q8W6S4	Burkholderia_virus	4.4e-21	85.2
WP_004196630.1\|714338_714602_-	hypothetical protein	Q8W6S4	Burkholderia_virus	2.2e-26	85.5

DBSCAN-SWA_2

1239764 : 1248611

Tanapox_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004535490.1\|1239764_1240607_+	alpha/beta hydrolase	A7XCB7	Tanapox_virus	1.4e-16	26.6
WP_004522362.1\|1240945_1241869_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	2.4e-43	36.2
WP_122771151.1\|1241996_1243325_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_004550116.1\|1243551_1244454_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	3.3e-53	39.9
WP_004189725.1\|1244815_1245133_-	competence protein ComE	NA	NA	NA	NA
WP_004537712.1\|1245204_1246197_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	9.1e-28	30.9
WP_009921652.1\|1246255_1247179_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.3e-15	27.1
WP_004537711.1\|1247210_1248611_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	4.2e-79	38.5

DBSCAN-SWA_3

1603741 : 1612990

unidentified_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_028201128.1\|1603741_1605289_+	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	4.3e-24	31.2
WP_004194373.1\|1605325_1605853_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_004532195.1\|1605849_1606533_+	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	2.0e-05	26.0
WP_004194137.1\|1606597_1607413_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	8.8e-37	33.3
WP_028201129.1\|1607588_1609607_-	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VT78	Pandoravirus	7.0e-51	34.2
WP_004522147.1\|1609640_1610771_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.7e-22	27.6
WP_004533561.1\|1611037_1612990_-	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	2.7e-148	49.2

DBSCAN-SWA_4

1896803 : 1950922

Pseudomonas_phage(14.29%)

transposase,integrase,tRNA,plate

attL 1938128:1938147|attR 1958291:1958310

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004521984.1\|1896803_1898102_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_085546533.1\|1898168_1899251_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	6.7e-08	46.6
WP_085546534.1\|1899294_1900152_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_004186955.1\|1900231_1900540_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_004521981.1\|1900554_1901151_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_004521980.1\|1901434_1902223_+	dioxygenase	NA	NA	NA	NA
WP_004527813.1\|1902677_1904279_-	APC family permease	NA	NA	NA	NA
WP_004196837.1\|1904712_1904916_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.3e-21	73.1
WP_045591085.1\|1905022_1906486_+\|transposase	IS1182-like element ISBma2 family transposase	A0A1X9I5T2	Streptococcus_phage	1.2e-79	38.3
WP_004555450.1\|1906697_1907960_-	Hsp70 family protein	NA	NA	NA	NA
WP_004198059.1\|1908724_1909330_-	nitroreductase family protein	NA	NA	NA	NA
WP_004198060.1\|1909291_1909867_+	hypothetical protein	NA	NA	NA	NA
WP_004198061.1\|1909826_1911110_-	MFS transporter	NA	NA	NA	NA
WP_004534987.1\|1911268_1911913_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011204168.1\|1911903_1912254_+	hypothetical protein	NA	NA	NA	NA
WP_004527819.1\|1912250_1912874_+	DUF1415 domain-containing protein	NA	NA	NA	NA
WP_004521971.1\|1912958_1913855_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004535007.1\|1913982_1915119_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_075018965.1\|1915115_1915331_-	hypothetical protein	NA	NA	NA	NA
WP_004545603.1\|1915475_1916594_-	acyltransferase	NA	NA	NA	NA
WP_011205258.1\|1917030_1917477_-	hypothetical protein	NA	NA	NA	NA
WP_009932025.1\|1918003_1918099_-	hypothetical protein	NA	NA	NA	NA
WP_004204896.1\|1918137_1920303_+	peptidase	A0A0P0IY26	Acinetobacter_phage	1.9e-46	27.1
WP_009945507.1\|1920884_1921283_+	hypothetical protein	NA	NA	NA	NA
WP_011205259.1\|1921325_1921595_+	hypothetical protein	NA	NA	NA	NA
WP_004204906.1\|1921697_1921928_+	hypothetical protein	NA	NA	NA	NA
WP_009967185.1\|1922161_1922518_-	hypothetical protein	NA	NA	NA	NA
WP_004199991.1\|1922543_1923812_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004545619.1\|1923826_1926088_+	peptidase domain-containing ABC transporter	A0A2R8FG22	Brazilian_cedratvirus	2.3e-10	31.9
WP_004199995.1\|1926084_1927533_+	TolC family protein	NA	NA	NA	NA
WP_004555447.1\|1927742_1928729_-	hypothetical protein	NA	NA	NA	NA
WP_004527832.1\|1928740_1929706_+	M15 family metallopeptidase	NA	NA	NA	NA
WP_076839823.1\|1929991_1933885_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004200003.1\|1933881_1934871_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_024430742.1\|1934875_1935808_+	OmpA family protein	NA	NA	NA	NA
WP_004521957.1\|1936006_1937128_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_085546535.1\|1937217_1939887_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	2.9e-89	31.6
1938128:1938147	attL	NA	NA	NA	NA
WP_004200010.1\|1939920_1941021_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_011205262.1\|1940984_1942811_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_080495565.1\|1942902_1943415_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004527837.1\|1943442_1943946_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004521953.1\|1944018_1945509_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004521952.1\|1945525_1946044_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004531875.1\|1946080_1946752_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004521950.1\|1947126_1947741_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_009967204.1\|1947849_1949196_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004521948.1\|1949192_1949978_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_080003363.1\|1950064_1950922_+\|integrase	tyrosine-type recombinase/integrase	C8CLF4	Xylella_phage	2.0e-84	58.9
1958291:1958310	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2213477 : 2224705

Burkholderia_phage(22.22%)

integrase

attL 2210682:2210699|attR 2227276:2227293

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2210682:2210699	attL	NA	NA	NA	NA
WP_011857935.1\|2213477_2214179_-	chitin-binding protein	A0A0K1Y848	Apis_mellifera_filamentous_virus	4.8e-07	30.4
WP_004525721.1\|2215022_2215271_-	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	4.0e-41	97.6
WP_004530408.1\|2215427_2216507_-	DUF3396 domain-containing protein	A9YX32	Burkholderia_phage	2.2e-160	99.0
WP_009932249.1\|2216506_2216959_-	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	2.3e-31	58.8
WP_009932250.1\|2217216_2217759_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	8.1e-47	55.8
WP_004530410.1\|2218012_2218930_-	hypothetical protein	A4PE40	Ralstonia_virus	4.0e-46	40.6
WP_009922658.1\|2218929_2219247_-	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	6.2e-15	57.0
WP_004525725.1\|2219626_2220370_-\|integrase	site-specific integrase	A0A0S2SYQ7	Pseudomonas_phage	9.4e-54	47.3
WP_004202928.1\|2221395_2222295_+	cytochrome c	NA	NA	NA	NA
WP_004524472.1\|2222617_2224705_-	AAA family ATPase	A7KV33	Bacillus_phage	1.9e-99	35.8
2227276:2227293	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3286932 : 3297882

Streptococcus_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004197486.1\|3286932_3289047_-	elongation factor G	E4ZFJ7	Streptococcus_phage	5.8e-56	26.7
WP_004530837.1\|3289338_3289848_-	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.5e-13	41.2
WP_071810810.1\|3290039_3290258_-	hypothetical protein	NA	NA	NA	NA
WP_004189780.1\|3290520_3291099_-	pseudouridine synthase	NA	NA	NA	NA
WP_004189552.1\|3291366_3292626_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.2e-12	63.0
WP_009929279.1\|3292598_3292781_-	hypothetical protein	NA	NA	NA	NA
WP_004536101.1\|3292793_3294404_+	multicopper oxidase family protein	NA	NA	NA	NA
WP_004196460.1\|3294534_3294738_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_004194131.1\|3295270_3295585_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	4.4e-13	44.6
WP_004196461.1\|3295581_3297882_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.1e-167	42.1

DBSCAN-SWA_7

3460871 : 3542040

uncultured_Caudovirales_phage(26.83%)

protease,integrase,portal,capsid,transposase,plate,tail,head,terminase

attL 3503247:3503262|attR 3542578:3542593

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004522511.1\|3460871_3461411_+\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_009969854.1\|3461508_3462645_-	murein-DD-endopeptidase	NA	NA	NA	NA
WP_004200110.1\|3462885_3463110_-	hypothetical protein	NA	NA	NA	NA
WP_009969855.1\|3463126_3463468_-	hypothetical protein	NA	NA	NA	NA
WP_004526357.1\|3463566_3464043_+	hypothetical protein	NA	NA	NA	NA
WP_085546621.1\|3465714_3472497_+	filamentous hemagglutinin N-terminal domain-containing protein	A0A0R6PJK4	Moraxella_phage	9.0e-34	33.9
WP_123850157.1\|3472493_3472784_+	hypothetical protein	NA	NA	NA	NA
WP_004543927.1\|3472885_3473065_+	hypothetical protein	NA	NA	NA	NA
WP_020850843.1\|3473083_3473308_+	CDI system lipoprotein BcpO	NA	NA	NA	NA
WP_004556790.1\|3473332_3475090_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_004543939.1\|3475122_3475320_+	hypothetical protein	NA	NA	NA	NA
WP_004541745.1\|3475494_3476079_+	hypothetical protein	NA	NA	NA	NA
WP_038802333.1\|3476813_3477933_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-49	39.5
WP_009969682.1\|3478731_3479307_-	recombinase family protein	A0A219Y912	Aeromonas_phage	8.7e-23	39.6
WP_009969683.1\|3480033_3481035_+	hypothetical protein	NA	NA	NA	NA
WP_076831080.1\|3481027_3481945_+	hypothetical protein	NA	NA	NA	NA
WP_009951642.1\|3482352_3482874_+	DNA-binding protein	NA	NA	NA	NA
WP_101539261.1\|3483099_3484334_-\|transposase	IS3-like element ISButh1 family transposase	A0A1B0Z042	Pseudomonas_phage	1.2e-101	64.8
WP_011850884.1\|3484431_3484602_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_004535931.1\|3484601_3485081_+	hypothetical protein	NA	NA	NA	NA
WP_004524590.1\|3485448_3485625_+	hypothetical protein	NA	NA	NA	NA
WP_004524589.1\|3485617_3485875_+	hypothetical protein	NA	NA	NA	NA
WP_004524588.1\|3485871_3486213_+	hypothetical protein	NA	NA	NA	NA
WP_038762690.1\|3489953_3490790_+	hypothetical protein	NA	NA	NA	NA
WP_038762084.1\|3490898_3492113_-\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.6e-85	41.1
WP_009964475.1\|3492567_3493668_+\|integrase	site-specific integrase	A0A2D1GMX8	Marinobacter_phage	1.5e-44	31.0
WP_009964477.1\|3493701_3493932_-	hypothetical protein	NA	NA	NA	NA
WP_038720986.1\|3493928_3494708_-	hypothetical protein	Q6J1P0	Burkholderia_virus	6.5e-21	57.3
WP_025405240.1\|3494716_3495046_-	hypothetical protein	NA	NA	NA	NA
WP_009964483.1\|3495159_3496476_-	hypothetical protein	NA	NA	NA	NA
WP_009964485.1\|3496475_3496925_-	hypothetical protein	NA	NA	NA	NA
WP_004534172.1\|3496921_3497527_-	hypothetical protein	NA	NA	NA	NA
WP_004534202.1\|3497523_3497859_-	hypothetical protein	NA	NA	NA	NA
WP_004550209.1\|3497910_3498129_-	hypothetical protein	NA	NA	NA	NA
WP_123850154.1\|3498257_3498713_-	hypothetical protein	NA	NA	NA	NA
WP_009909040.1\|3498660_3499146_-	helix-turn-helix transcriptional regulator	A0A193GYL7	Enterobacter_phage	4.4e-12	41.2
WP_076853252.1\|3499294_3499522_+	hypothetical protein	NA	NA	NA	NA
WP_009927752.1\|3499610_3500138_+	hypothetical protein	C7BGG0	Burkholderia_phage	9.7e-29	46.5
WP_025405238.1\|3500151_3500484_+	hypothetical protein	NA	NA	NA	NA
WP_009964493.1\|3500491_3500947_-	hypothetical protein	NA	NA	NA	NA
WP_099975963.1\|3500948_3501407_+	hypothetical protein	NA	NA	NA	NA
WP_009964497.1\|3501780_3502251_+	hypothetical protein	NA	NA	NA	NA
WP_085507505.1\|3502372_3504865_+	virulence protein E	A0A2D1GN57	Marinobacter_phage	7.2e-98	41.5
3503247:3503262	attL	NA	NA	NA	NA
WP_085546623.1\|3505082_3505856_+	hypothetical protein	NA	NA	NA	NA
WP_025405236.1\|3506075_3506264_+	hypothetical protein	NA	NA	NA	NA
WP_009964504.1\|3506357_3506927_+	hypothetical protein	NA	NA	NA	NA
WP_009964506.1\|3506889_3508878_+\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	6.6e-179	53.3
WP_009964508.1\|3508888_3509095_+	hypothetical protein	NA	NA	NA	NA
WP_038720977.1\|3509091_3510585_+\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	4.1e-133	50.8
WP_071810768.1\|3510581_3511658_+\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	3.1e-50	38.1
WP_038720978.1\|3511684_3512029_+\|head	head decoration protein	NA	NA	NA	NA
WP_009964517.1\|3512093_3513089_+\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	2.8e-109	59.1
WP_009964519.1\|3513092_3513383_+	hypothetical protein	NA	NA	NA	NA
WP_009964520.1\|3513384_3513915_+\|tail	phage tail protein	A0A2H4JBV1	uncultured_Caudovirales_phage	4.1e-11	29.0
WP_004533675.1\|3513904_3514438_+	hypothetical protein	Q9JML9	Wolbachia_phage	6.2e-23	39.5
WP_038720980.1\|3514440_3515121_+\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	9.0e-19	35.1
WP_009964525.1\|3515185_3515392_+	hypothetical protein	NA	NA	NA	NA
WP_004547840.1\|3515388_3515733_+	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.4e-23	50.9
WP_009964528.1\|3515729_3516623_+\|plate	baseplate J protein	A0A1J0I2M3	Salmonella_phage	8.4e-49	40.1
WP_004539949.1\|3516615_3517191_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.0e-32	47.7
WP_004539647.1\|3517178_3518642_+	hypothetical protein	A4JWL8	Burkholderia_virus	8.0e-214	77.8
WP_009964532.1\|3518657_3519110_+\|tail	tail assembly chaperone	A4JWL9	Burkholderia_virus	4.8e-45	77.7
WP_009964534.1\|3519176_3520346_+\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	3.7e-161	73.5
WP_085504239.1\|3520356_3520860_+\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	4.7e-41	47.9
WP_085504240.1\|3520929_3521232_+\|tail	phage tail assembly protein	V5YST8	Pseudomonas_phage	1.5e-05	37.2
WP_085546624.1\|3521319_3523734_+\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	2.0e-68	34.5
WP_085546625.1\|3523742_3524624_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	6.6e-30	37.4
WP_004540041.1\|3524598_3524805_+\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	4.0e-15	61.2
WP_085546626.1\|3524814_3525867_+	late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	1.2e-78	44.8
WP_004533694.1\|3525942_3526137_+	hypothetical protein	NA	NA	NA	NA
WP_085546627.1\|3526129_3526627_+	lysozyme	A4JX20	Burkholderia_virus	6.3e-70	81.8
WP_085546628.1\|3526626_3527172_+	lysozyme	Q8W6S5	Burkholderia_virus	8.9e-78	92.3
WP_085507497.1\|3527314_3528103_+	DNA adenine methylase	Q8W6S4	Burkholderia_virus	2.1e-152	96.9
WP_085507834.1\|3528138_3528447_-	hypothetical protein	A4PE26	Ralstonia_virus	1.1e-24	61.2
WP_123895699.1\|3528848_3529442_-	hypothetical protein	NA	NA	NA	NA
WP_085507495.1\|3529326_3529800_-	hypothetical protein	NA	NA	NA	NA
WP_085546629.1\|3529792_3530299_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	3.9e-19	40.1
WP_038782997.1\|3530295_3530718_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	4.9e-15	49.4
WP_080295183.1\|3530779_3531061_-	hypothetical protein	NA	NA	NA	NA
WP_009890265.1\|3531060_3531525_-	hypothetical protein	C7BGE3	Burkholderia_phage	9.7e-49	60.4
WP_085507492.1\|3531605_3532175_+	DUF159 family protein	A4JX27	Burkholderia_virus	2.6e-88	81.8
WP_157130088.1\|3532472_3532943_+	hypothetical protein	NA	NA	NA	NA
WP_025369304.1\|3533295_3533757_+	excisionase family DNA-binding protein	K4ICM4	Acidithiobacillus_phage	8.4e-45	62.1
WP_085546447.1\|3533881_3535042_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-41	38.4
WP_101539261.1\|3535321_3536555_+\|transposase	IS3-like element ISButh1 family transposase	A0A1B0Z042	Pseudomonas_phage	1.2e-101	64.8
WP_123850137.1\|3536691_3537294_-	hypothetical protein	NA	NA	NA	NA
WP_085507488.1\|3537295_3538327_-	ParA family protein	H2BD62	Pseudomonas_phage	1.9e-65	39.4
WP_009951418.1\|3538957_3540097_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004534921.1\|3540093_3540927_+	hypothetical protein	NA	NA	NA	NA
WP_011203829.1\|3541317_3541410_-	hypothetical protein	NA	NA	NA	NA
WP_085546630.1\|3541686_3542040_-\|integrase	integrase	NA	NA	NA	NA
3542578:3542593	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3958250 : 3966456

Burkholderia_virus(28.57%)

integrase

attL 3938680:3938700|attR 3983212:3983232

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3938680:3938700	attL	NA	NA	NA	NA
WP_085507438.1\|3958250_3961334_+	AAA family ATPase	A0A1B1IUG5	uncultured_Mediterranean_phage	2.2e-11	36.6
WP_085507816.1\|3961953_3962160_-	KTSC domain-containing protein	D2IZW7	Enterococcus_phage	1.5e-06	47.5
WP_071810706.1\|3963255_3963684_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5NNJ1	Burkholderia_phage	4.6e-21	47.4
WP_009941993.1\|3963634_3963841_+	hypothetical protein	Q8W6S4	Burkholderia_virus	3.7e-16	86.7
WP_004521809.1\|3963861_3964575_-	hypothetical protein	A4PE26	Ralstonia_virus	1.5e-32	43.3
WP_011204999.1\|3964583_3965090_-	hypothetical protein	NA	NA	NA	NA
WP_004531127.1\|3965061_3965535_-	hypothetical protein	NA	NA	NA	NA
WP_004552921.1\|3965527_3966037_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	3.0e-19	40.1
WP_004534827.1\|3966033_3966456_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	4.9e-15	48.3
3983212:3983232	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018390

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018389

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection