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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP018417 Burkholderia pseudomallei strain 3000465972 chromosome 2, complete sequence 2 crisprs csa3,DinG,cas14j,cas3,PD-DExK 0 0 7 0
NZ_CP018416 Burkholderia pseudomallei strain 3000465972 chromosome 1, complete sequence 0 crisprs cas3,WYL,DEDDh,DinG,csa3 0 0 12 0

Results visualization

1. NZ_CP018417
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018417_1 1574363-1574496 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018417_2 1998807-1998899 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 414921 : 420778 11 Burkholderia_virus(50.0%) integrase attL 412233:412249|attR 426039:426055
DBSCAN-SWA_2 423872 : 482453 78 Pseudomonas_phage(11.11%) head,terminase,capsid,portal,plate,transposase,tail NA
DBSCAN-SWA_3 661222 : 728856 52 Aeromonas_phage(25.0%) holin,plate NA
DBSCAN-SWA_4 739170 : 797155 63 Burkholderia_phage(95.45%) holin,terminase,capsid,integrase,plate,transposase,tail attL 748870:748886|attR 786976:786992
DBSCAN-SWA_5 1317439 : 1382951 50 Ralstonia_phage(28.57%) transposase,holin,plate NA
DBSCAN-SWA_6 1777128 : 1829533 32 Acanthocystis_turfacea_Chlorella_virus(16.67%) transposase,plate NA
DBSCAN-SWA_7 2563392 : 2629191 52 Acinetobacter_phage(12.5%) transposase,plate NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP018416
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 309468 : 318725 7 unidentified_phage(16.67%) NA NA
DBSCAN-SWA_2 589338 : 671130 76 Acinetobacter_phage(21.43%) plate,tRNA,protease,transposase,integrase attL 587453:587512|attR 678517:678533
DBSCAN-SWA_3 894655 : 908974 14 Stx2-converting_phage(23.08%) integrase,transposase attL 891860:891877|attR 911545:911562
DBSCAN-SWA_4 1093169 : 1157851 59 Stx2-converting_phage(15.79%) integrase,tRNA,protease,transposase attL 1124923:1124940|attR 1168863:1168880
DBSCAN-SWA_5 1165434 : 1203460 51 Burkholderia_phage(60.42%) terminase,plate,holin,capsid,portal,tail,head NA
DBSCAN-SWA_6 2001380 : 2012336 10 Streptococcus_phage(16.67%) protease NA
DBSCAN-SWA_7 2121424 : 2192393 58 Bacillus_virus(25.0%) transposase,capsid,coat NA
DBSCAN-SWA_8 2208027 : 2272446 71 uncultured_Caudovirales_phage(31.25%) terminase,plate,protease,capsid,portal,tail,transposase,head,integrase attL 2210789:2210807|attR 2255303:2255321
DBSCAN-SWA_9 2655838 : 2672927 22 Burkholderia_virus(21.43%) integrase,transposase attL 2649902:2649922|attR 2689683:2689703
DBSCAN-SWA_10 2720707 : 2764909 41 uncultured_Caudovirales_phage(50.0%) coat,plate,transposase NA
DBSCAN-SWA_11 3516437 : 3520918 9 Burkholderia_virus(57.14%) NA NA
DBSCAN-SWA_12 4073504 : 4082370 8 Yaba_monkey_tumor_virus(16.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage