CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP020873	Prosthecochloris sp. HL-130-GSB chromosome, complete genome	3 crisprs	Cas9_archaeal,RT,PD-DExK,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas3HD,csa3	0	15	5	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP020873_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020873_1

257625-257726

Orphan

Consensus_repeat	Method
CCGGCAGCAAAAGGCGCTCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020873_1

>merge|NZ_CP020873|1|257625-257726|CRISPRCasFinder
CCTGCTCCAAAAGGCGCTCCGGCAGCAAAAGGCGCTCCGGCAGCAAAGGGTGCGCCCAAAGCACCTCCGAAGGGTGCACCGGCAGCAAAAGGAGCTCCGGCA

>NZ_CP020873|1|1|257625-257726|CRISPRCasFinder
CCTGCTCCAAAAGGCGCTCCGGCA	GCAAAAGGCGCTCCGGCAGCAAAGGGTGCGCCCAAAGCACCTCCGAAGGGTGCA
CCGGCAGCAAAAGGAGCTCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020873.1\|WP_085658897.1\|251169_251910_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|237896
NZ_CP020873.1\|WP_085658894.1\|247561_249433_+\|DNA-mismatch-repair-endonuclease-MutL	unknown	unknown	gnl\|CDD\|234630
NZ_CP020873.1\|WP_085658891.1\|243198_245661_+\|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I	unknown	unknown	gnl\|CDD\|181856
NZ_CP020873.1\|WP_085658900.1\|255081_257277_+\|photosystem-I-reaction-center-subunit-IX	unknown	unknown	gnl\|CDD\|365957
NZ_CP020873.1\|WP_085660502.1\|268594_269113_+\|50S-ribosomal-protein-L10	unknown	unknown	gnl\|CDD\|234632
NZ_CP020873.1\|WP_085658906.1\|266774_267350_+\|transcription-termination/antitermination-factor-NusG	unknown	unknown	gnl\|CDD\|180161
NZ_CP020873.1\|WP_085658902.1\|261385_262702_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP020873.1\|WP_085658898.1\|252866_253892_-\|AmmeMemoRadiSam-system-radical-SAM-enzyme	unknown	unknown	gnl\|CDD\|275136
NZ_CP020873.1\|WP_157115565.1\|253897_254665_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP020873.1\|WP_085658903.1\|262845_263166_+\|septum-formation-initiator-family-protein	unknown	unknown	gnl\|CDD\|368217
NZ_CP020873.1\|WP_085658907.1\|267887_268577_+\|50S-ribosomal-protein-L1	unknown	unknown	gnl\|CDD\|180071
NZ_CP020873.1\|WP_085658895.1\|249656_250070_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|365823
NZ_CP020873.1\|WP_085658905.1\|266561_266753_+\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|236066
NZ_CP020873.1\|WP_085658901.1\|258181_258916_+\|polyprenol-monophosphomannose-synthase	unknown	unknown	gnl\|CDD\|133062
NZ_CP020873.1\|WP_085658896.1\|250193_251177_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP020873.1\|WP_085658908.1\|269170_269551_+\|50S-ribosomal-protein-L7/L12	unknown	unknown	gnl\|CDD\|234671
NZ_CP020873.1\|WP_085658904.1\|265317_266055_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP020873.1\|WP_085658892.1\|245670_246939_+\|CinA-family-nicotinamide-mononucleotide-deamidase-related-protein	unknown	unknown	gnl\|CDD\|234789
NZ_CP020873.1\|WP_085660501.1\|263222_265268_+\|(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|377382
NZ_CP020873.1\|WP_085658893.1\|246927_247431_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP020873.1\|WP_085658897.1\|251169_251910_+\|ABC-transporter-permease	gnl\|CDD\|237896	PRK15066, PRK15066, inner membrane transport permease; Provisional.	7.93305e-16
NZ_CP020873.1\|WP_085658894.1\|247561_249433_+\|DNA-mismatch-repair-endonuclease-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
NZ_CP020873.1\|WP_085658891.1\|243198_245661_+\|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I	gnl\|CDD\|181856	PRK09436, thrA, bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional.	0
NZ_CP020873.1\|WP_085658900.1\|255081_257277_+\|photosystem-I-reaction-center-subunit-IX	gnl\|CDD\|365957	pfam00223, PsaA_PsaB, Photosystem I psaA/psaB protein.	3.71204e-05
NZ_CP020873.1\|WP_085660502.1\|268594_269113_+\|50S-ribosomal-protein-L10	gnl\|CDD\|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	7.32308e-61
NZ_CP020873.1\|WP_085658906.1\|266774_267350_+\|transcription-termination/antitermination-factor-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	3.79867e-62
NZ_CP020873.1\|WP_085658902.1\|261385_262702_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP020873.1\|WP_085658898.1\|252866_253892_-\|AmmeMemoRadiSam-system-radical-SAM-enzyme	gnl\|CDD\|275136	TIGR04337, Radical_SAM, AmmeMemoRadiSam system radical SAM enzyme. Members of this protein family are uncharacterized radical SAM enzymes that occur in a prokaryotic three-gene system along with homologs of mammalian proteins Memo (Mediator of ErbB2-driven cell MOtility) and AMMERCR1 (Alport syndrome, Mental Retardation, Midface hypoplasia, and Elliptocytosis). Among radical SAM enzymes that have been experimentally characterized, the most closely related in sequence include activases of pyruvate formate-lyase and of benzylsuccinate synthase.	4.9356e-94
NZ_CP020873.1\|WP_157115565.1\|253897_254665_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	7.77147e-97
NZ_CP020873.1\|WP_085658903.1\|262845_263166_+\|septum-formation-initiator-family-protein	gnl\|CDD\|368217	pfam04977, DivIC, Septum formation initiator. DivIC from B. subtilis is necessary for both vegetative and sporulation septum formation. These proteins are mainly composed of an amino terminal coiled-coil.	3.82086e-05
NZ_CP020873.1\|WP_085658907.1\|267887_268577_+\|50S-ribosomal-protein-L1	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	1.02237e-141
NZ_CP020873.1\|WP_085658895.1\|249656_250070_-\|c-type-cytochrome	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	5.42671e-05
NZ_CP020873.1\|WP_085658901.1\|258181_258916_+\|polyprenol-monophosphomannose-synthase	gnl\|CDD\|133062	cd06442, DPM1_like, DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.	3.97661e-96
NZ_CP020873.1\|WP_085658896.1\|250193_251177_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.21668e-99
NZ_CP020873.1\|WP_085658908.1\|269170_269551_+\|50S-ribosomal-protein-L7/L12	gnl\|CDD\|234671	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed.	1.05631e-43
NZ_CP020873.1\|WP_085658904.1\|265317_266055_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	3.94067e-74
NZ_CP020873.1\|WP_085658892.1\|245670_246939_+\|CinA-family-nicotinamide-mononucleotide-deamidase-related-protein	gnl\|CDD\|234789	PRK00549, PRK00549, competence damage-inducible protein A; Provisional.	6.2059e-130
NZ_CP020873.1\|WP_085660501.1\|263222_265268_+\|(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl\|CDD\|377382	pfam04551, GcpE, GcpE protein. In a variety of organisms, including plants and several eubacteria, isoprenoids are synthesized by the mevalonate-independent 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway. Although different enzymes of this pathway have been described, the terminal biosynthetic steps of the MEP pathway have not been fully elucidated. GcpE gene of Escherichia coli is involved in this pathway.	1.04706e-124
NZ_CP020873.1\|WP_085658905.1\|266561_266753_+\|preprotein-translocase-subunit-SecE	gnl\|CDD\|236066	PRK07597, secE, preprotein translocase subunit SecE; Reviewed.	8.92656e-14

>NZ_CP020873.1|WP_085658900.1|255081_257277_+|photosystem-I-reaction-center-subunit-IX
MADQANPTGVAPKGKVPPPKGKVPPPKGNGSPGAASVIQEKDAAKMKRFLFQRTETRSTKWYQIFDTDKLDDEQVVGAHLALLGVLGFVMGIYYLSGMQVMPWGGPGFHDNWFYLTIKPRMVSLGIDTYSARTEDLMAASTKLMGWAILHFISGSILLFGGWRHWSHNLTNPFTGRAGNFRDFRFLGKFGDVVFQGTSAKTYKDALGPHSVYMALLFLGWGLMLWLALGIAPIPDFQTINSEAFMSFVWFVVFFALGVYWWKNPPNAAIHLNDDMKAAFSVHLTAMGYVNIALGIIAFVAFQQDSFAPYYAELDKLVFYIYGEPFNRVSFDFVQEGGQIISGSKEFAEFAPYAILPKNGEAFGMSRVVINLIVFNHIICGVLYVFAGVYHGGQYLLKIQINGLYSQIKSIWVAKGRDQDVQVKILGTIMALCFATMLSVYAVIVWNTICELNVFGTNIMMSFYWLKPLPILHWMFEDPSINDWVMAHVVVAGSLFSLIALARIAFFSHTSPLWDDLGLKKNSYSFPCLGPVYGGTCGVSIQDQLWFAMLWGVKGLSAVCWYIDGAWIASMMYAVPVADAKSWDAVAGLSHHYSAGIFYYFWTETVTIFSSSHLSVILMIGHLVWFISFAVWFEDRGSRLEGADIQTRTVRWLGKKFLNRDVTFRFPVLTISDSKLAGTFLYFGGTFMLVFLFIANGFYQTDTPDLPPVGEAAGSGQMLLTQVVDFIMKLIA
>NZ_CP020873.1|WP_157115565.1|253897_254665_-|diaminopimelate-epimerase
MSGAGNDFIVIDNMRLETDLAEEQIRNLCTRRTGIGADGMILVEPSDRYDFTMKYFNADGRPGSMCGNGGRCAVYFAWKYGICPEQTVFEANGCRYEAHVTGHEEVRLKMTLPGDFRDEFPAGEFTCAFVDTGSPHTIIYTDDVSRVDVDTSGRRIRNDTSLFPEGTNVNFLQITSPGTLTLRTFERGVEAETLACGTGAVAAALMSYRLGKISSRRVEITVKSGDILTVDFSEDMTDVYLAGPAKIVYKGTVKL
>NZ_CP020873.1|WP_085658898.1|252866_253892_-|AmmeMemoRadiSam-system-radical-SAM-enzyme
MSTVSKLCDHEARFWHHLQKSAVQCDLCHHYCRLRDGAPGMCRTRINKSGTLCSLNYGHPAAIALDPVEKKPLYHFMPGTLTFSIGTFGCNFRCDNCQNWEISQFPCQGSQHEQMEYTPERVVREARNAGASSVSCTYSEPTVFAEYAFDIMKLAKKAGLGTIWVSNGYMSDICMKELIPLLDAVNIDLKSVDEAFYRRICKADLAPVLKNIELFARSGVHLELSTLLIPGYSDDMSMLQRAAEFIVDAAGPRTPWHLLDFVPEISWRMQRSEATRPDLAEDAARIAKQAGLTYIYSRSHRNTHCPECGRTIIERNRYAVRRHDHNGQCPACRTVLPVRDA
>NZ_CP020873.1|WP_085658897.1|251169_251910_+|ABC-transporter-permease
MRNSLIAAWSIVLKDMKAYYLKPPNISWGLLFPLVWTGMFFVKTGREAGDIAGVLPGMVALSVLFGTTSMLAVTVTFERKAKAFERLLLSPVPLGVLVLAKTSGAIVFGMVNTLVPFAIALYLADLSMVSWGVVVPAVMLVAVVSTFLGLFVAVSVSEVFEAQTFSNFFRFPMIFLCGLFFPVQDLPSYLQPVSMILPLTYGVDLLHGAINGSAMFSPAFDVVMLLFFITLLFSLSLRSVHRRWIY
>NZ_CP020873.1|WP_085658896.1|250193_251177_+|ABC-transporter-ATP-binding-protein
MFDAGNECIQVEVLTKSFGRVKAVDGVSFSVSHGEVFGFLGPNGAGKTTTINMLTGLARPDSGRIVIDGVDCSSRPKAAQHLMGVVPDESNLYPELTGFENLCFCGALYSMKSAPRKARAGELLGLFGLSEAADRRFAEYSKGMKRRLVIAAALMHSPGILFLDEPTAGIDVESARGIRGMLEELQRNGTTIFLTTHHIEEAERLCDRVAFIVEGRLRRLDSLENLLRPVRGHEVMVLDLGMSATPGQDELERRFPGYRFSYSSPSLLTVTSPRPIPVAPLAGYLSSLGIEVFEARRKQLSLEDVFVRVTGIGAHLMKSGKPGRGHA
>NZ_CP020873.1|WP_085658895.1|249656_250070_-|c-type-cytochrome
MDRISKALYGMLFFCITLPGPVTALEATGPGAVPDGKVIYEQNCRSCHAMKPPATSAPPIVALASRYRTAYSTRDEAVEAMTGFMKAPTEKQALLGRGAIKRFGLMPAMTISDAELNAVSGWLWDQYDPGFDTGKCR
>NZ_CP020873.1|WP_085658894.1|247561_249433_+|DNA-mismatch-repair-endonuclease-MutL
MPRISKLPEAVANRISAGEVVQRPASVVKELIENAIDAGADRIVLSVKDAGKELIQIIDNGQGMSEADAMMCVERFATSKISSADELEHLTTLGFRGEALASISSVSHFELRTRIEDDDAGIMLRYEGGMLSDKTAVASDRGTTVSVRNLFFNVPARRKFLKTNATEFKHIFEAVRAQVLAYPEIRWQMFSDDEELFHFRNSDMHERLNFFFGEGFADSLIQVREENDFLSLYGYIGKPGMLKRQKNDQLFYINRRLVQNRMLSQALQQAYGELLVERQVPFALLFLGIDTRRVDVNVHPAKMEVRFEDERSVRHMFYPVVKRAVQLQDFSPDVGVRDFREHPLERPGPGPENAIRNLGYQPTPSMASGTADLYDSYRSSSFSPRRIAENMPGFQEDMFSSLGSVAGSERELRRSGNDNGEQRSQDDHRPDASGSDPKIWQLHNKYIICQIKTGLMVIDQHVAHERVLYERAVEIMENNVPNSQQLLFPQKIELKSWEFEIFQEIREELQRLGFNVRTFGGRNVVIEGVPQDVRNGSESMILQNMIDEYQQNAIKLKLEKRENLAKSYSCRNAIMSGQKLGQEEMRSLIDRLFATSMPYVCPHGRPVIIRISLDQLDRMFGRT
>NZ_CP020873.1|WP_085658893.1|246927_247431_-|hypothetical-protein
MKASLAKTTILLLFFIFSASFAGSTETAAQPENTAQNRHRELTGSWKLVRATITPDVLGIPVPVHGFTARGVISTDSTCTIHASGSFLGKEYSYSGNGRIEETDGATLVFTVDKGIIVRDGTQHHDRPGSRIHASYRVTADDTLIIMTFRDADGIRYRFDLELSLSG
>NZ_CP020873.1|WP_085658892.1|245670_246939_+|CinA-family-nicotinamide-mononucleotide-deamidase-related-protein
MNAEIISIGDELLTGQKVNTNAASICSGLAAIGIGVDRIIVCADREDAIIRQFSDSLDRSDIVLVTGGLGPTKDDRTRNAAAALLNARMVFDESTYNRSLQRYAASGNVPTQGLRENAMVIEGATVIANSCGLAPGMILTAGPEFDNHVLVLMPGVPSEMEAMMRNTVIPWFSGRSGSVIHHSHIMTTGAGETTIARRIVDIEESLPDGTTLAYLPHQAGVSLRVSTTGKDRDNVERANSAVVEAICKAVPELVYATREVSLEAVIGKLLLERGFTVSTAESCTGGLIASRLTDVAGSSAYFQRGYIVYSNASKQEMLGVSGETLERFGAVSEEVAGEMARGCLDSSKADLSISATGIAGPGGEMPGKPLGMVCLGLAVRQPDGSPMVHTTTFCAHGDRLRNKYRFSEAALRLLWQELISSR
>NZ_CP020873.1|WP_085658891.1|243198_245661_+|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I
MNVLKFGGTSIENSERIRNILAIIREALRNGPVIVVVSAIRKVTDLLLDAAIAASGGDERYRTVLDEIERLHTSLVADLLEGDAARDTLEYLHEGLRELRDVLHGVCLLRELSDKSTALVMSFGERFSARIVSSFLSSEGVPSVCSDARDLIVTDTSHCDARVDMVASSRRIGNSFDDIGDVVPVVTGYIGAAPDGTVTTLGRGGSDYTATIIGSVLGAGEIQIWTDVDGFFSADPKRVHDAFALPFISYTEAMELSHAGAKVLHPYAVHPAMKAGIPVIVKNSLDPSVPGTRIENAPLEERVPPGPVTGLSSISNIVLLTLSGSGMVGVPGIASRLFSCLARHMINIIFISQASSEQSISIVINAAQAAKARKILEAEFASELKNRQVESLSVRRHIAMIAIVGRNMAGHPGVSAHLFETLGKNGINVVAVAQGANEMNISFVIDSHDEDKALNCIHESFLLSRRKVHVFIAGTGTIAKSLIGQIREHREILRTEKNLDVVVSGMANTRMIALNDSGIDLQDWENALVAREGERTIADYIGRIKSRNLHNTIFVDCTASGDVAKAYPELLASNISVVTANKLGMAGSWDLYEAIDASLQGSNARFLYETNVGAGLPIINTLNDLRNSGDKIFSIEGVLSGTLSYIFNELRKGGSFSDIVRSAREAGFTEPDPREDLSGADFARKFLILGRELGYRMDYDDIECESLVPEGLRGEMSVDEFLDRLSCIDAHYDDLNREAAGRGMTIAYAGEICEGKARISVKMLPLDNPVAGLNGTENMVVFTTGRYHSTPLVVKGPGAGGEVTAGGVFADILRIASYLI
>NZ_CP020873.1|WP_085658901.1|258181_258916_+|polyprenol-monophosphomannose-synthase
MPSPKNPVLVIIPTYNEADNIARLVRDIMAMYDERFDILVIDDHSPDATAGIVRQMQHAFPGLHLYERSGKLGLGTAYIEGFRYGLEHGYEFLVEMDADYSHDPSVLGEMIRQAEAHDLVIGSRYVNNTVNVINWPLSRLILSRAASLYTSLVTGMPVSDPTSGYKCFRADMLEKIDLARVHSQGYSFQIEMNFRVWKKNGAIAEVPIIFTDRTVGQSKMSRRNIAEAVWIVWLLKLKSLFRLL
>NZ_CP020873.1|WP_085658902.1|261385_262702_+|phosphopyruvate-hydratase
MPLITNVIARQILDSRGNPTVEVDVLTESSFGRAAVPSGASTGIHEAVELRDGDTDVYLGKGVLRAVENVNTVINDALEGMMVTEQAEIDNLLLSLDGTPNKSRLGANALLGVSLACAKAAAEYSGLPLFRYIGGTFARTLPVPMMNVLNGGAHADNNVDFQEFMIMPIGFSSYSDALRAGAEIFHALKALLKSKGLSTAVGDEGGFAPDLGSNEEAIELVIEAVGKAGYRIGSPASKGGLGEDDHVMIALDPASSEFFDAEKKKYVFKKSSQRELAPAEMAAYWESWASQYPIISIEDGMAEDDWEGWKLLTDKIGNQVQLVGDDLFVTNSRRLADGIGRGVGNSILIKVNQIGTLTETLDAIDLAKRNGYTSVISHRSGETEDSTIAQIAVATNAGQIKTGSMSRSDRMAKYNELLRIEEELGGEAVYPGRAAFRV
>NZ_CP020873.1|WP_085658903.1|262845_263166_+|septum-formation-initiator-family-protein
MVNRLKALVTGFFSYILERPKKVFFIALAGAFLVWIVFGDYGILARLRMEADNRMLRERYEKEEAEIEQNRQTLRQVSDPGAVEKTAREKYNFRKEGETLFIIREQ
>NZ_CP020873.1|WP_085660501.1|263222_265268_+|(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MYDYQRRLTREVGFGPISLGGHQPIRVESMTTTHTMDTAASVEQCRRLYEAGCEIIRLTVPTEKDADNLRIIREQLRRDAIDTPLVADIHFSRKAAMKAVEHVDNIRINPGNYANRKKFSSDGYTDEEFQREQENVREEFLPLVARAKELGVSMRIGTNHGSLSDRIVSRYGNTPEGMVEAALEFARICEDEGYHDILFSMKSSNVRVMIEAYRLLCVKADAELRHAYPLHLGVTEAGSGDEGRIKSAMGIGALLEEGLGDTIRVSLTEDPVNEVPVGFALVKKYNDVMKVQGEQGHRAVNRVIGPQQGVVSGQLPPFDPFSYARRVSRHFQFGELEAGGQSFPAVESVACHGLDDPDALLEEILQRLHTDAPSRIVKSECVSVRVRSKEDIHLLDQLLDRLGVARSRVGAAVSDPALACELLDKVIKVRLDITEGEQIDKALLDRLHDRNAVIEFCFMHATSSLSVPAEVLSMIVSRVSSNGLKRIMVSVDSRDAIYAYRRVLQRFSSAGIDVPVLVRYRGRSDERLAVLIECAVQAGTLFCDGLGDMLALETGMGPDEEAELCFNILQAARVRMSKTEFISCPGCGRTYFELEKTAGVIKSRLSHLTGLKIGIMGCIVNGPGEMADADFGYVGAGKGRVSLYVGKECVASGVAEDKAVDQLIELIKSKGCWIEPISVET
>NZ_CP020873.1|WP_085658904.1|265317_266055_+|SDR-family-NAD(P)-dependent-oxidoreductase
MGIGRSFALEYAQRGCDLVLTSRSEELLERLASEIRSTGRVDVQVCPADLSSPEGPEMVFGFCQDKGVRVTGLVHCAGFGYAGSFHSMPENVVREMVFVNMFAVTELTRLFLPDMIQQRRGSVITVASMAGLQGVAGLSLYAATKSFLLTFSEALHAEYSGKGIRALVVCPGYIMTSFHRRAGQDLSRSLLPVSAPEVVVRAVFRGLRHNRVRVYPCASDYMLAFLQRFTPRKLVLKIAARLAPL
>NZ_CP020873.1|WP_085658905.1|266561_266753_+|preprotein-translocase-subunit-SecE
MKAYLDKVSRYYHDVVGEMKKVSWPGREEVKDLTVVVLTVSGILALFTFVVDWVISSFISQLL
>NZ_CP020873.1|WP_085658906.1|266774_267350_+|transcription-termination/antitermination-factor-NusG
MSEKKSEQDIQRHPEARWYALRIYSGHERKVKEGIENEVERLGLSDKIVQVYVPYERFVEVKNGKKRSLTKNAFPGYVLIEAVLDKQTKNLIMDIPSVMGFLGVGDVPTPLRPDEVEKILEPESTVEQRSVVEAPFQVGDSVKVIDGPFSSLTGVVHDVCTERMKVKVMINFFGRSTPTELDFSQVKSVSQ
>NZ_CP020873.1|WP_085658907.1|267887_268577_+|50S-ribosomal-protein-L1
MAGKNYRNALGRVSAQNEYELLEAVEVLKEITNVKFDASVDVALRLGVDPRHADQVVRGTVMLPHGTGKTVSVLVICSPAKAAEAEEAGADFVGFEDYIEKIQGGWTDVDVIIATPDVMGKLGRVGKILGPRGLMPNPKSGTVTMDVAKAVQEVKAGKIEFRVDKAGNVHAPVGKISFDAEKLVENINSFVKEVVRLKPSAAKGQYLLGMSVSSTMSPGIKVRKEKFVA
>NZ_CP020873.1|WP_085660502.1|268594_269113_+|50S-ribosomal-protein-L10
MKREKKEQVVQHVAEKLEKAQGIYLTEFQGLDVAQMAELRAEFRKAGVEYKVVKNTLVRKALENVAGGDKLAEGLVNTTGLAIGYDDPVVPAKIIEKFGKKNESLKFKMAAIEGAVFEADKLSELAKMLSKTENIGRVAGLVNSVVASVPMVVNAVMRDLVSVIDQVAKQKQ
>NZ_CP020873.1|WP_085658908.1|269170_269551_+|50S-ribosomal-protein-L7/L12
MATIEALVEEIGKLSLTEASELVKALEDKFGVSAAPAVVAGGMMAAPAGEAAAQEEKTEFDVELKAAGANKINVIKVVRSITGLGLKEAKELVDGAPKVVKEAVSKDEAEKIAKELKDAGAEVELK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP020873_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020873_2

616424-616529

Orphan

Consensus_repeat	Method
ATTACAGCACACGAACAGGCGTTCAAGGCTTTCCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020873_2

>merge|NZ_CP020873|2|616424-616529|CRISPRCasFinder
ATTACAGCACACGAACAGGCGTTCAAGGCTTTCCAGTAAGGTCAACGCGCCCATAAGTGATAAGCACCTCATTACAGCACACGAACAGGCGTTCAAGGCTTTCCAG

>NZ_CP020873|2|2|616424-616529|CRISPRCasFinder
ATTACAGCACACGAACAGGCGTTCAAGGCTTTCCAG	TAAGGTCAACGCGCCCATAAGTGATAAGCACCTC
ATTACAGCACACGAACAGGCGTTCAAGGCTTTCCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020873.1\|WP_085659168.1\|614688_615729_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|377294
NZ_CP020873.1\|WP_085659164.1\|611790_612981_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379062
NZ_CP020873.1\|WP_157115474.1\|617515_618301_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224401
NZ_CP020873.1\|WP_085659166.1\|613767_614109_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|379098
NZ_CP020873.1\|WP_085659163.1\|610696_611536_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP020873.1\|WP_157115473.1\|614105_614447_-\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP020873.1\|WP_085659160.1\|605288_606617_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	unknown	unknown	gnl\|CDD\|235422
NZ_CP020873.1\|WP_085659170.1\|620183_620936_+\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750
NZ_CP020873.1\|WP_157115477.1\|629390_629585_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020873.1\|WP_085659165.1\|613256_613805_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP020873.1\|WP_085659161.1\|607176_607959_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370470
NZ_CP020873.1\|WP_085659175.1\|627805_628303_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020873.1\|WP_085659172.1\|622226_623768_+\|IS1634-family-transposase	unknown	unknown	gnl\|CDD\|227708
NZ_CP020873.1\|WP_157115476.1\|628582_629299_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|226163
NZ_CP020873.1\|WP_085659169.1\|618996_619572_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370579
NZ_CP020873.1\|WP_085659171.1\|621142_621979_+\|3'(2'),5'-bisphosphate-nucleotidase-CysQ	unknown	unknown	gnl\|CDD\|238816
NZ_CP020873.1\|WP_085659162.1\|608660_610157_-\|Fic-family-protein	unknown	unknown	gnl\|CDD\|376885
NZ_CP020873.1\|WP_085659173.1\|624022_624508_+\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP020873.1\|WP_157115475.1\|624504_625521_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP020873.1\|WP_012506645.1\|610382_610673_+\|transposase	unknown	unknown	gnl\|CDD\|366690

Protein	Function_ID	Function_description	E-value
NZ_CP020873.1\|WP_085659168.1\|614688_615729_-\|metal-dependent-hydrolase	gnl\|CDD\|377294	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase. YdjM is a family of putative LexA-binding proteins. Members are predicted to be membrane-bound metal-dependent hydrolases that may be acting as phospholipases. It is a member of the SOS network, that rescues cells from UV and other DNA-damage. Expression of YdjM is regulated by LexA.	6.6354e-27
NZ_CP020873.1\|WP_085659164.1\|611790_612981_+\|AAA-family-ATPase	gnl\|CDD\|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	1.22625e-07
NZ_CP020873.1\|WP_157115474.1\|617515_618301_+\|ATP-binding-protein	gnl\|CDD\|224401	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair].	1.05801e-49
NZ_CP020873.1\|WP_085659166.1\|613767_614109_-\|IS3-family-transposase	gnl\|CDD\|379098	pfam13276, HTH_21, HTH-like domain. This domain contains a predicted helix-turn-helix suggesting a DNA-binding function.	3.30631e-12
NZ_CP020873.1\|WP_085659163.1\|610696_611536_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	7.50651e-28
NZ_CP020873.1\|WP_157115473.1\|614105_614447_-\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.36219e-11
NZ_CP020873.1\|WP_085659160.1\|605288_606617_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	0
NZ_CP020873.1\|WP_085659170.1\|620183_620936_+\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	4.52483e-30
NZ_CP020873.1\|WP_085659165.1\|613256_613805_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.09916e-55
NZ_CP020873.1\|WP_085659161.1\|607176_607959_+\|hypothetical-protein	gnl\|CDD\|370470	pfam09407, AbiEi_1, AbiEi antitoxin C-terminal domain. AbiEi_1 is the cognate antitoxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	9.61542e-49
NZ_CP020873.1\|WP_085659172.1\|622226_623768_+\|IS1634-family-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	1.31968e-21
NZ_CP020873.1\|WP_157115476.1\|628582_629299_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|226163	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane].	1.53861e-09
NZ_CP020873.1\|WP_085659169.1\|618996_619572_-\|hypothetical-protein	gnl\|CDD\|370579	pfam09603, Fib_succ_major, Fibrobacter succinogenes major domain (Fib_succ_major). This domain of about 175 to 200 amino acids is found, in from one to five copies, in over 50 proteins in Fibrobacter succinogenes S85, an obligate anaerobe of the rumen. Many members of this family have an apparent lipoprotein signal sequence. Conserved cysteine residues, suggestive of disulfide bond formation, are also consistent with an extracytoplasmic location for this domain. This domain can also be found in small numbers of proteins in Chlorobium tepidum and Bacteroides thetaiotaomicron.	9.43197e-53
NZ_CP020873.1\|WP_085659171.1\|621142_621979_+\|3'(2'),5'-bisphosphate-nucleotidase-CysQ	gnl\|CDD\|238816	cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family. It has been proposed that CysQ helps control intracellular levels of PAPS, which is an intermediate in cysteine biosynthesis (a principal route of sulfur assimilation).	9.76429e-81
NZ_CP020873.1\|WP_085659162.1\|608660_610157_-\|Fic-family-protein	gnl\|CDD\|376885	pfam02661, Fic, Fic/DOC family. This family consists of the Fic (filamentation induced by cAMP) protein and doc (death on curing). The Fic protein is involved in cell division and is suggested to be involved in the synthesis of PAB or folate, indicating that the Fic protein and cAMP are involved in a regulatory mechanism of cell division via folate metabolism. This family contains a central conserved motif HPFXXGNG in most members. The exact molecular function of these proteins is uncertain. P1 lysogens of Escherichia coli carry the prophage as a stable low copy number plasmid. The frequency with which viable cells cured of prophage are produced is about 10(-5) per cell per generation. A significant part of this remarkable stability can be attributed to a plasmid-encoded mechanism that causes death of cells that have lost P1. In other words, the lysogenic cells appear to be addicted to the presence of the prophage. The plasmid withdrawal response depends on a gene named doc (death on curing) that is represented by this family. Doc induces a reversible growth arrest of E. coli cells by targetting the protein synthesis machinery. Doc hosts the C-terminal domain of its antitoxin partner Phd (prevents host death) through fold complementation, a domain that is intrinsically disordered in solution but that folds into an alpha-helix on binding to Doc.This domain forms complexes with Phd antitoxins containing pfam02604.	9.68036e-05
NZ_CP020873.1\|WP_085659173.1\|624022_624508_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	0.000215935
NZ_CP020873.1\|WP_157115475.1\|624504_625521_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	6.77976e-18
NZ_CP020873.1\|WP_012506645.1\|610382_610673_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	6.84142e-09

>NZ_CP020873.1|WP_085659168.1|614688_615729_-|metal-dependent-hydrolase
MDSITQASLGAAVAHAAWHKPLGRKALPWGAFFGTLPDLDVVFFPFLDDVQQLYWHRGESHSVFFVLIGGALLGALLWSTRWKTKISPQRVITAIVLILATHVLIDSFNIYGTQFFAPFSRFGFSLGNLFIIDPLYTGPLLLGIIAAAFSRSGYGYRFTGAGLAISSVYILFSLVSHAYADSVFSRQLDTRQIGVKASYTGATPMNTLLWRHVALTDSGILVGYFSVVADSPEEEIGFVRVQRNEGLIAPYRGRSNVEAVDWFSNGFWVAEETDGVITMADLRFGELRNDPDDPPEKWQYIFSWEISDDPGSLTQQSVSLDETRKALVTLWARLTGDIREGSPFEK
>NZ_CP020873.1|WP_157115473.1|614105_614447_-|transposase
MRSHTLPFQEVCKMSQTPMRRKYSKEFKQDAVNLALKGEKPVTEITSDLGIRPDLLYRWKYEHQKHQQDAFPGSGKLKDAQEEKIRQLERELQLVKEERAILKKAFAVFTKTP
>NZ_CP020873.1|WP_085659166.1|613767_614109_-|IS3-family-transposase
MKYQFIKEHRKEFAVRTMCRVLEVSVSSYYAWIQRPESHRAQENRQLCEAIQRMHEEKYQTYGSPRMTAELRKNGYKCSRPRVARLMQSLGIQAKTEPPGTDRPQPAGSGVSC
>NZ_CP020873.1|WP_085659165.1|613256_613805_-|IS3-family-transposase
MAPNLLDQEFHVDQPNEVWTSDLTYVRTAAGWQYLTVILELFNREIIGYSLSPRLTAESTVNVALDMAVLHRQPPAGVILHSDRGVQYASKSFRKRLKKYGMIQSMSGKGNCYDNAVTETFFKTLKTEWIYGTKYRNQHELRQSLFTCIEVFYNRKRMHSALGYLSPVEFMMHYQQSIALAS
>NZ_CP020873.1|WP_085659164.1|611790_612981_+|AAA-family-ATPase
MDKIRNPFSPGAGAPPPELAGRDGVLEQAEVLFARIRQKRPEKSLIMTGLRGVGKTVLLNEMERMAREVGYRTVFIEASEQKPLAVLLVPQLRSLLYALDRVAGAGNKVRQGLAVLKSFVGAIKVSFGDVELGLDIEPEKGTADSGDLEVDLPSLFIAIGEAAEERQSAVAIFIDEIQFFSKTELNALIMAMHKMQQRQLPLVLVGAGLPILPGLAGDAKSYAERLFSFPDIGPLQEEDAAKALQDPVMDEGVAFEVEALEEIFQLTKGYPYFLQEWGYQAWNQAESSPISLQLVHETTKHVIARLDENFFRVRFDRLTDGEKKYLRAMAELGQGPYRTTDITQKLGVESSTALSSVRSKLIKKGMIYSPAHGLLNFTVPLFDEFTRRAIPDDGVF
>NZ_CP020873.1|WP_085659163.1|610696_611536_+|IS3-family-transposase
MVEKEHPELSMTRQCDLLSIHRSGLYYQSKKASKLNLELMRLIDHQYLKKPYYGVYRMWQWLQRDKGYNINIKRVRRLYRLMGLEAIGPKPNTSRPAPGHKVYPYLLRGLVITHSNHVWATDITYVPMAQGFMYLMAVIDLKSRYVLNWSVSNTMDAEWCAEVFRETVRLHGAPEILNTDQGSQFTSEVFTRAVIKEAGSQLSMDGKGRAIDNVFIERLWRSVKYEYIYYRPPVDGLELYQGLKEWFIDYNTDRRHTALNDEFPETVYEFYKPKAPEAA
>NZ_CP020873.1|WP_012506645.1|610382_610673_+|transposase
MKRTRRKFSAEFKTKVVLEALSERLTLTELAQKHEIHPNQITQWKREFLEKAPDVFSKGDKAQKAEQDHEQEAEQLYKTIGQLKVEVDWLKKKLQS
>NZ_CP020873.1|WP_085659162.1|608660_610157_-|Fic-family-protein
MESMLKNTTNDDSLILYAELNAAEIRAAQRRLKAGSYQRIVRGVLSARPEKEWPALIALHRIRVLAALFPGAVIGFRSAFKGAMPVDDVIHLSYSYNRTVRLPGLTVVLVKGQGNIAGDEPMSGRNIYFPSQARMLLENLTSSRGVIKKSVGKAAVEERLLTIFDSRGPDALNRIRDDAHTLAPLLGFDKEFQVLNELIGTILGTKSAQLSTTSGQALTRGTPLDARRLALFETLAAALRANPLKENGSPVTTENARINFAFLESYFSNFIEGTKFDIAEARQIVLEGKIIDQRPKDSHDILGVFRQTINPGWSNQSMAIGEAVVHQLQQRHADLMKERPETAPGEFKDRENFAGNTTFVSPKNVRGTLIEGSKLLPSVPSGMARALLAMFIVSEVRPFIDGNGQLARLVMNSELSVVNASRIIIPTLFREEYLDCLRVLTRQGKPEPFIAAMQKIQQWSAEFDYTDLDQVISRMQACNAFEKSRRLYRLLNISELST
>NZ_CP020873.1|WP_085659161.1|607176_607959_+|hypothetical-protein
MKLSQYIDGLQAKGSYCFRGEEVGAALESSTVATRAALRRLKQHGAIAMPFRGFYAIVPPEYRQMGCLPANQFIPELMEYLKEPYYAGIFSAGEFYGAAHQRPQAFQVVTEHSRSGILCGTVKVDFIKRKNAAMMPTREFKTPRGYLKVPTPEVTAFDVVGYPHHAGRLDNAATVLAELAESLDADKLIAIAGLSPITWSQRLGYLLELIGETELAEGLASYVAERKPVPAPLSPSRSYHGVRQNPRWRLLPNEKVSPDL
>NZ_CP020873.1|WP_085659160.1|605288_606617_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX
MSREKEPGKGGRKTGSRGRDYNKVECSFCGRSSDEVNSMVAGPDAFICDRCIMSSVEILRKEISAIKQNDAQQHHEPFQPRLISPKHIMESLGQYVIGQERARKALAVAVYNHYRRIASQEWVRDEHDDVVIEKSNILLIGPTGTGKTLLAQTLATLLDVPFTIVDATSLTEAGYVGDDVETILTRLLQAADFNLERAERGIIYVDEIDKIARKSANVSITRDVSGEGVQQALLKILEGAVVGVPPRGGRKHPEQQLINVNTRNILFICGGAFEGLDKIIGRRVAKSSMGFGTNVKEQKTEVDPSILQKVSQDDLHEYGLIPEFIGRLPVISVLDPLDAKALRNILVEPKNALAKQYKKLFEMDGCELIFNEDALDRVVEIAIERGTGARALRSVLENIMIDIMFELPSMEGVKKCVITLDTINGEGDAEFYYGNGRRKKIA
>NZ_CP020873.1|WP_157115474.1|617515_618301_+|ATP-binding-protein
MMTTVQHITEQARELRLSSLVTDLPALLEQARREEPSYTEFAALLLDTELAYRQKNNLERRLKTAQLPLVHDLDQYDHKTINGISKTQLQELRQLVWLDQTYNMLLVGPSGTGKTFLAGGLCYDAIKQGYTGLFRRMDDLIQTIKLKDITTSAAREYKRLQKAQLLVIDDIMMFPLKKDVSVGLFQLIDQLHEQTSFIITTNKNPKEWAEMLGDEVLATALLDRLLYRSEVIQLSGNSYRMEHRKTIFSNNHTAAGGADSQ
>NZ_CP020873.1|WP_085659169.1|618996_619572_-|hypothetical-protein
MLDAQLPESITIGDQIWMVSNLNVTRFRNGDAITEINDPTQWRHQASAGRCSIPGQNDDKTGKLYNWYAVTDSRGLAPEGWRIPNEEDWCTLIEYLGGMNSAGGALKQHHDNHWKSPNAGANNKSGFSALPAGMRTLYGDFMYHNTHCYFWSSTPLNDKHARVFSLNYFDPSIHETSCPFGTGASIRCIKA
>NZ_CP020873.1|WP_085659170.1|620183_620936_+|YdcF-family-protein
MLIWHKVLPLFFLPLGFGIVLLFLGAVLRRWVLVWLGIVWLWVMSTPMMGDALMRFVEGTDRRVEVASLEEADAVVVLSGMMIHVPGVQFGEWGDASDRFEAGVELFQAGKAPLLMFTGAKMPWTPAVRAEGEVLRERALRLGIADDAVRVTERVGNTADEAREIRQMLGGERSRVILVTSAFHMRRAAMLFRRAGLEVVEFPVDFRTDVYSEWTLKDVLPQVAGLEDSEQALRELMGLGFYLVKERFAR
>NZ_CP020873.1|WP_085659171.1|621142_621979_+|3'(2'),5'-bisphosphate-nucleotidase-CysQ
MESSPELMLAVEAALKAGEVILDVYEREHIDVEMKVDDSPVTEADREANRVICDILRLSGAFVISEEAEVLSYEDRQKWGALWVVDPLDGTREFLKRNDEFTVNIALLDYDTPKLGVIYAPALGKMYVCSELFGPWLVDDVHDALRSEEGFFSRAKRLPFEQERRPFRVVASRSHMDGMTRRYIDGLREEHPDLEVVQVGSSLKLAMVASGEADVYVRYGRTMEWDTAAGHAILNASGCELVTLDLGMDLLYNKKEMDNPPFIARRKGGWRQAQSGDQ
>NZ_CP020873.1|WP_085659172.1|622226_623768_+|IS1634-family-transposase
MRGDLTIRTVRTKSGATAVQVVQNKGKTRSFLKHIGSAHTEQELELLMAEAREYAQAHCLQPSLFAETPPEPSPSAVPNVLVHAKLVGVTHQFARRVLLVCARKCGLGDLPELYQDLALMRIIEPASKLKTLELLDRYFGVRYIERTAYRMLSKLIDHQATIETAAIQTARDDMQEQFSLVLYDVTTLYFESFKAYDFQKPGFSKDNKPMQPQIVIGLITTRSGFPIMHEVFEGNTFEGHTMLAVVKRFQERVGETKPVIVADAAMLSKTNMKELQDEGYCYIVGARLANTAAKFIAKIDKKLPRTDKATMRFDYGHAVENAAMICQYSDARYKKDKREFDKQVKRALDLLERNEPGRRAKFVKKSGEKNKPFIFDTALQAKTEKLLGVKGFVTNIPEATLSSAKVIEYYQDLWHVEQAFRMSKSDLQARPIFHRTQDSIKAHMLVCFMGLMMGKYMEIKTGVSLRKIREELWKVHEAQILDQSTGEVHIMQMETSELTKSLLEKIGVPEFSH
>NZ_CP020873.1|WP_085659173.1|624022_624508_+|transposase
MGYSHAVRQSILKKVLPPESRSIAEVSRETGINHQTIRNWIKQAESGILADGTQDSCPRFLTPKEKYELVVEAAGIDDEQLGEFLRERGLHTEHLTIWNQELRDMVDKKSERQDKENKELKKKVRDLEKELQRKEKALAEAAALLVLKKKLNALIKENEDD
>NZ_CP020873.1|WP_157115475.1|624504_625521_+|IS3-family-transposase
MILETHKAEVIMLIEEAHENGARYSKACEVVGISHRTLQRWKQCGLQDRRKGSKKTVVRKVPQETRDEIINVCNEPRFRDLTPYEIVPQLLEEGRYLASERTIYRILKEADQLHHRSESRVRHRHSKPPERRATGSDQVYTWDITYMARTIRGLFFYAYVIKDIFDKSIVGWSIHAEESERHSRALFERVLKGRRIQLKALHADNGHPMKGVSLMGLLQDLNVAVSHNRPRTSNDNPFVESLFKTMKYHVTYPRAFDTLADARQWMADFVHWYNTEHLHSSIGYVTPHQMRYGQAEAIFEQRNDAINRARELHPERWGSRPAKQWIVNREVVLNPDKK
>NZ_CP020873.1|WP_085659175.1|627805_628303_-|hypothetical-protein
MAEENTQHRLNFALVNIKTEQLNIHPEAFKADTNAKINSGINFGVDNSKKLLKVIFKNVFFHSEGEKATEEEAGNPFIDIVISCVFAIDPESWKMLSNEEKNMFVLPREVAGHFASIVQSTARGILHNETENTDYNRYMIPANNIGDIIKDHVRLPLQAPAQQQQ
>NZ_CP020873.1|WP_157115476.1|628582_629299_-|outer-membrane-beta-barrel-protein
MKKALSLIMVFAIAGICSTAAHAADKYVSGSIGISWINDIDAEVKRNSESQKGATFEIGSGVTFLGAAGCDYGDYRVEAELGYQSGDIDTMQKIRGPKKGQGDGPPAYDINGDISLYSLMLNGYYDIALGKGVELSPYIGAGFSHILLESNEALFEYDPDDDTVANTEFDATAFSCQTGLVLAIPVADNIMLDARYRYFATLDFSVTDTVEDNRDTETNKYTMDVESHSMLLGLRVGL
>NZ_CP020873.1|WP_157115477.1|629390_629585_-|hypothetical-protein
MTGEPFTIHRAQRIPAKRDPVTGKASPLQSVGNKKKSKVKRQKSKSGHWPAETTPHNHGHYFRS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP020873_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020873_3

1429168-1431859

TypeI

I-C

Consensus_repeat	Method
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	PILER-CR
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CRISPRCasFinder
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CRT

40 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas3HD

The CRISPR arrays of NZ_CP020873_3

>merge|NZ_CP020873|3|1429168-1431859|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGACGACGCTGCAGCCGCTGATCAGGTGACGTAACCGCGTTTCAATCCACGCCCCTGCGGGAGGGGCGACTTGCACCATATTTTAAACCTTAGATATTTTATCATGTTTCAATCCACGCCCCTGCGGGAGGGGCGACTAAACTCCCTTGGAATCCAATATACTACTGACCGAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCCGACCCAATCTGTCGCCATACTCGCCACAATGGGTTTCAATCCACGCCCCTGCGGGAGGGGCGACAATCCCCGAACGCATACCGCCTATGCGCGCAAACGTTTCAATCCACGCCCCTGCGGGAGGGGCGACGTTACCACAACAAACAAAACCAAACCAACCAAGGAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCTGCGCGAGGGTGTACCCCAGTGGAACTCCTGGCGTTTCAATCCACGCCCCTGCGGGAGGGGCGACAAGGCGCCGGTAGAGGGTCTCCAAGCCCTCATAACTGTTTCAATCCACGCCCCTGCGGGAGGGGCGACACTGACGCTGATTCTAACGAGTTACTTACGATTCAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACTGATGCAACTGCAGCAACTATCAACCAGCTACGGGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCGCACAGGATTTTGATTCTTGTCCTGTTTTGAATGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCACTTCTGCAACCCGCGCTTCCATCATTTCCGAACTGTTTCAATCCACGCCCCTGCGGGAGGGGCGACGTGCGGACCTCCTCAACGTGGATCTAAGCGAAGTGTTTCAATCCACGCCCCTGCGGGAGGGGCGACAGTAAGCCGTTACCGTTGGACAAACCGCAAGCAAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACATTTTGCATAACAGCAGAAGCTCCTGCAGGAGTTGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCGCACAGTAAAGTTTATGATAAAAATCTGCCTTGTTTCAATCCACGCCCCTGCGGGAGGGGCGACGTCTGCTAACGCGGCTAATCTTCAAATTGCTCGTGTTTCAATCCACGCCCCTGCGGGAGGGGCGACGCTATACGCGGGTTTTGGGGGTGAGATGATCAAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCGATTATTTTACGTCCTGTCTGCCTTGGCCGCAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACGACGGGCATATCTGCATACCCGTCACGAGGGTTGTTTCAATCCACGCCCCTGCGGGAGGGGCGACGAGTCACCGGGATTTTTTTGTTCACCCATGAATTTTTGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCCGCGCTTTCAAAAGTAACGTCTCCAACCGTGTTGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCACCTTGTACATATAGTCTATTATCAGATGGCCCAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCTAAGCGTGCAAAGGCGGTAGTTTTTAAGTTAAAAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACGAGGCCCGGTCCATCACGATGCCCGGCAGGACAAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACAGTCTCCTTTGCAGCCAAGTTATCGTCCAGCTCCTCGTTTCAATCCACGCCCCTGCGGGAGGGGCGACACTTGCCTTTGATGAGCAGTATTAGACATGCGCTCTTGTTTCAATCCACGCCCCTGCGGGAGGGGCGACGACTTCCACCACTACTATTATATGATCCTCGTCGTTTCAATCCACGCCCCTGCGGGAGGGGCGACTCAGCGCTTTTTCATCGCGCGTATAACCTTATTTGGTTTCAATCCACGCCCCTGCGGGAGGGGCGACTCAATGTTCTTTGCGCCTGCCAATTGTGTCTTTAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCTTACTCGACTTGATCCTTATCTAGGGCCATCTGGGTTTCAATCCACGCCCCTGCGGGAGGGGCGACGTCTGCTAACGCAGCAAATTTGCAGATTGCCCGCGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCTGATGCAACCGCAGCTACGATTAATCAGCTCCGTGTTTCAATCCACGCCCCTGCGGGAGGGGCGACATCCGTGCTGTCACCCGGATTACGTTGCTCTCCCATGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCAGGTGTTGAAGCTCCAGATCCACCAGCCGCAAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACGGTTTGGTTTTGTTTTTGTCGCATCTCACCGCCAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACAACCAACAACAACCAAGGAGGCAACAATGACCACAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCGCCAGGCGTTCCACTGGGCCACATCCTCGCGCAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACGTGCATAACCTTCCGCGCCAATGCGCTAAAAATCCAGTTTCAATCCACGCCCCTGCGGGAGGGGCGACCGGCAACGTACGGTGTGCCGTATAGTGAGATTTTGTTTCAATCCACGCCCCTGCGGGAGGGGCGAC

>NZ_CP020873|3|1|1429168-1431859|PILER-CR
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GACGCTGCAGCCGCTGATCAGGTGACGTAACCGC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TTGCACCATATTTTAAACCTTAGATATTTTATCAT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TAAACTCCCTTGGAATCCAATATACTACTGACCGA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CCGACCCAATCTGTCGCCATACTCGCCACAATGG
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AATCCCCGAACGCATACCGCCTATGCGCGCAAAC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTTACCACAACAAACAAAACCAAACCAACCAAGGA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CTGCGCGAGGGTGTACCCCAGTGGAACTCCTGGC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AAGGCGCCGGTAGAGGGTCTCCAAGCCCTCATAACT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	ACTGACGCTGATTCTAACGAGTTACTTACGATTCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TGATGCAACTGCAGCAACTATCAACCAGCTACGG
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGCACAGGATTTTGATTCTTGTCCTGTTTTGAAT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CACTTCTGCAACCCGCGCTTCCATCATTTCCGAACT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTGCGGACCTCCTCAACGTGGATCTAAGCGAAGT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AGTAAGCCGTTACCGTTGGACAAACCGCAAGCAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	ATTTTGCATAACAGCAGAAGCTCCTGCAGGAGTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGCACAGTAAAGTTTATGATAAAAATCTGCCTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTCTGCTAACGCGGCTAATCTTCAAATTGCTCGT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GCTATACGCGGGTTTTGGGGGTGAGATGATCAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGATTATTTTACGTCCTGTCTGCCTTGGCCGCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GACGGGCATATCTGCATACCCGTCACGAGGGTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GAGTCACCGGGATTTTTTTGTTCACCCATGAATTTTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CCGCGCTTTCAAAAGTAACGTCTCCAACCGTGTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CACCTTGTACATATAGTCTATTATCAGATGGCCCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CTAAGCGTGCAAAGGCGGTAGTTTTTAAGTTAAAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GAGGCCCGGTCCATCACGATGCCCGGCAGGACAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AGTCTCCTTTGCAGCCAAGTTATCGTCCAGCTCCTC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	ACTTGCCTTTGATGAGCAGTATTAGACATGCGCTCTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GACTTCCACCACTACTATTATATGATCCTCGTC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TCAGCGCTTTTTCATCGCGCGTATAACCTTATTTG
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TCAATGTTCTTTGCGCCTGCCAATTGTGTCTTTA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CTTACTCGACTTGATCCTTATCTAGGGCCATCTGG
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTCTGCTAACGCAGCAAATTTGCAGATTGCCCGC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CTGATGCAACCGCAGCTACGATTAATCAGCTCCGT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	ATCCGTGCTGTCACCCGGATTACGTTGCTCTCCCAT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CAGGTGTTGAAGCTCCAGATCCACCAGCCGCAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GGTTTGGTTTTGTTTTTGTCGCATCTCACCGCCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AACCAACAACAACCAAGGAGGCAACAATGACCACA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGCCAGGCGTTCCACTGGGCCACATCCTCGCGCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTGCATAACCTTCCGCGCCAATGCGCTAAAAATCCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGGCAACGTACGGTGTGCCGTATAGTGAGATTTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC

>NZ_CP020873|3|3|1429168-1431859|CRISPRCasFinder
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GACGCTGCAGCCGCTGATCAGGTGACGTAACCGC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TTGCACCATATTTTAAACCTTAGATATTTTATCAT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TAAACTCCCTTGGAATCCAATATACTACTGACCGA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CCGACCCAATCTGTCGCCATACTCGCCACAATGG
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AATCCCCGAACGCATACCGCCTATGCGCGCAAAC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTTACCACAACAAACAAAACCAAACCAACCAAGGA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CTGCGCGAGGGTGTACCCCAGTGGAACTCCTGGC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AAGGCGCCGGTAGAGGGTCTCCAAGCCCTCATAACT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	ACTGACGCTGATTCTAACGAGTTACTTACGATTCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TGATGCAACTGCAGCAACTATCAACCAGCTACGG
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGCACAGGATTTTGATTCTTGTCCTGTTTTGAAT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CACTTCTGCAACCCGCGCTTCCATCATTTCCGAACT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTGCGGACCTCCTCAACGTGGATCTAAGCGAAGT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AGTAAGCCGTTACCGTTGGACAAACCGCAAGCAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	ATTTTGCATAACAGCAGAAGCTCCTGCAGGAGTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGCACAGTAAAGTTTATGATAAAAATCTGCCTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTCTGCTAACGCGGCTAATCTTCAAATTGCTCGT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GCTATACGCGGGTTTTGGGGGTGAGATGATCAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGATTATTTTACGTCCTGTCTGCCTTGGCCGCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GACGGGCATATCTGCATACCCGTCACGAGGGTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GAGTCACCGGGATTTTTTTGTTCACCCATGAATTTTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CCGCGCTTTCAAAAGTAACGTCTCCAACCGTGTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CACCTTGTACATATAGTCTATTATCAGATGGCCCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CTAAGCGTGCAAAGGCGGTAGTTTTTAAGTTAAAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GAGGCCCGGTCCATCACGATGCCCGGCAGGACAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AGTCTCCTTTGCAGCCAAGTTATCGTCCAGCTCCTC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	ACTTGCCTTTGATGAGCAGTATTAGACATGCGCTCTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GACTTCCACCACTACTATTATATGATCCTCGTC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TCAGCGCTTTTTCATCGCGCGTATAACCTTATTTG
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TCAATGTTCTTTGCGCCTGCCAATTGTGTCTTTA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CTTACTCGACTTGATCCTTATCTAGGGCCATCTGG
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTCTGCTAACGCAGCAAATTTGCAGATTGCCCGC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CTGATGCAACCGCAGCTACGATTAATCAGCTCCGT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	ATCCGTGCTGTCACCCGGATTACGTTGCTCTCCCAT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CAGGTGTTGAAGCTCCAGATCCACCAGCCGCAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GGTTTGGTTTTGTTTTTGTCGCATCTCACCGCCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AACCAACAACAACCAAGGAGGCAACAATGACCACA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGCCAGGCGTTCCACTGGGCCACATCCTCGCGCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTGCATAACCTTCCGCGCCAATGCGCTAAAAATCCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGGCAACGTACGGTGTGCCGTATAGTGAGATTTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC

>NZ_CP020873|3|1|1429168-1431859|CRT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GACGCTGCAGCCGCTGATCAGGTGACGTAACCGC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TTGCACCATATTTTAAACCTTAGATATTTTATCAT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TAAACTCCCTTGGAATCCAATATACTACTGACCGA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CCGACCCAATCTGTCGCCATACTCGCCACAATGG
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AATCCCCGAACGCATACCGCCTATGCGCGCAAAC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTTACCACAACAAACAAAACCAAACCAACCAAGGA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CTGCGCGAGGGTGTACCCCAGTGGAACTCCTGGC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AAGGCGCCGGTAGAGGGTCTCCAAGCCCTCATAACT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	ACTGACGCTGATTCTAACGAGTTACTTACGATTCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TGATGCAACTGCAGCAACTATCAACCAGCTACGG
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGCACAGGATTTTGATTCTTGTCCTGTTTTGAAT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CACTTCTGCAACCCGCGCTTCCATCATTTCCGAACT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTGCGGACCTCCTCAACGTGGATCTAAGCGAAGT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AGTAAGCCGTTACCGTTGGACAAACCGCAAGCAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	ATTTTGCATAACAGCAGAAGCTCCTGCAGGAGTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGCACAGTAAAGTTTATGATAAAAATCTGCCTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTCTGCTAACGCGGCTAATCTTCAAATTGCTCGT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GCTATACGCGGGTTTTGGGGGTGAGATGATCAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGATTATTTTACGTCCTGTCTGCCTTGGCCGCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GACGGGCATATCTGCATACCCGTCACGAGGGTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GAGTCACCGGGATTTTTTTGTTCACCCATGAATTTTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CCGCGCTTTCAAAAGTAACGTCTCCAACCGTGTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CACCTTGTACATATAGTCTATTATCAGATGGCCCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CTAAGCGTGCAAAGGCGGTAGTTTTTAAGTTAAAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GAGGCCCGGTCCATCACGATGCCCGGCAGGACAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AGTCTCCTTTGCAGCCAAGTTATCGTCCAGCTCCTC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	ACTTGCCTTTGATGAGCAGTATTAGACATGCGCTCTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GACTTCCACCACTACTATTATATGATCCTCGTC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TCAGCGCTTTTTCATCGCGCGTATAACCTTATTTG
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	TCAATGTTCTTTGCGCCTGCCAATTGTGTCTTTA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CTTACTCGACTTGATCCTTATCTAGGGCCATCTGG
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTCTGCTAACGCAGCAAATTTGCAGATTGCCCGC
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CTGATGCAACCGCAGCTACGATTAATCAGCTCCGT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	ATCCGTGCTGTCACCCGGATTACGTTGCTCTCCCAT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CAGGTGTTGAAGCTCCAGATCCACCAGCCGCAA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GGTTTGGTTTTGTTTTTGTCGCATCTCACCGCCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	AACCAACAACAACCAAGGAGGCAACAATGACCACA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGCCAGGCGTTCCACTGGGCCACATCCTCGCGCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	GTGCATAACCTTCCGCGCCAATGCGCTAAAAATCCA
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC	CGGCAACGTACGGTGTGCCGTATAGTGAGATTTT
GTTTCAATCCACGCCCCTGCGGGAGGGGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020873.1\|WP_085659733.1\|1416561_1417029_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP020873.1\|WP_085659734.1\|1417025_1417787_-\|slipin-family-protein	unknown	unknown	gnl\|CDD\|259808
NZ_CP020873.1\|WP_085659742.1\|1432329_1433361_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP020873.1\|WP_085659749.1\|1440761_1441511_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213260
NZ_CP020873.1\|WP_085659750.1\|1441500_1442259_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223673
NZ_CP020873.1\|WP_085659731.1\|1408166_1410062_+\|propionyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|341271
NZ_CP020873.1\|WP_085659744.1\|1434005_1434905_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|274216
NZ_CP020873.1\|WP_085659732.1\|1415567_1416587_+\|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	unknown	unknown	gnl\|CDD\|236515
NZ_CP020873.1\|WP_085659748.1\|1439404_1439650_-\|CRISPR-associated-endonuclease-Cas3''	cas3HD	cd09641_cas3HD_CAS-I	gnl\|CDD\|193608
NZ_CP020873.1\|WP_085659740.1\|1427425_1428988_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP020873.1\|WP_085659735.1\|1420186_1420945_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP020873.1\|WP_085659741.1\|1432036_1432327_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP020873.1\|WP_085659738.1\|1425292_1426264_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350098
NZ_CP020873.1\|WP_085659739.1\|1426667_1427408_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NZ_CP020873.1\|WP_085659746.1\|1436667_1437381_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_CP020873.1\|WP_085660616.1\|1410201_1410606_+\|methylmalonyl-CoA-epimerase	unknown	unknown	gnl\|CDD\|319912
NZ_CP020873.1\|WP_085659743.1\|1433357_1434002_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP020873.1\|WP_085659737.1\|1423774_1425286_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020873.1\|WP_085659745.1\|1434907_1436671_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP020873.1\|WP_085659747.1\|1437401_1439408_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688

Protein	Function_ID	Function_description	E-value
NZ_CP020873.1\|WP_085659733.1\|1416561_1417029_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	1.08461e-36
NZ_CP020873.1\|WP_085659734.1\|1417025_1417787_-\|slipin-family-protein	gnl\|CDD\|259808	cd08826, SPFH_eoslipins_u1, Uncharacterized prokaryotic subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes a subgroup of the stomatin-like protein family (SLPs or slipins) that is found in bacteria and archaebacteria. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Bacterial and archaebacterial SLPs remain uncharacterized. This subgroup contains PH1511 from the hyperthermophilic archaeon Pyrococcus horikoshi.	1.48993e-112
NZ_CP020873.1\|WP_085659743.1\|1433357_1434002_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	6.04176e-45
NZ_CP020873.1\|WP_085659749.1\|1440761_1441511_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.04608e-86
NZ_CP020873.1\|WP_085659731.1\|1408166_1410062_+\|propionyl-CoA-synthetase	gnl\|CDD\|341271	cd05967, PrpE, Propionyl-CoA synthetase (PrpE). EC 6.2.1.17: propanoate:CoA ligase (AMP-forming) or propionate#CoA ligase (PrpE) catalyzes the first step of the 2-methylcitric acid cycle for propionate catabolism. It activates propionate to propionyl-CoA in a two-step reaction, which proceeds through a propionyl-AMP intermediate and requires ATP and Mg2+. In Salmonella enterica, the PrpE protein is required for growth of Salmonella enterica on propionate and can substitute for the acetyl-CoA synthetase (Acs) enzyme during growth on acetate. PrpE can also activate acetate, 3HP, and butyrate to their corresponding CoA-thioesters, although with less efficiency.	0
NZ_CP020873.1\|WP_085659744.1\|1434005_1434905_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|274216	TIGR02589, conserved_hypothetical_protein, CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csd2 protein of the Dvulg subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02590, the Csh2 protein of the Hmari CRISPR subtype.	4.36377e-155
NZ_CP020873.1\|WP_085659732.1\|1415567_1416587_+\|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	gnl\|CDD\|236515	PRK09435, PRK09435, methylmalonyl Co-A mutase-associated GTPase MeaB.	1.46404e-167
NZ_CP020873.1\|WP_085659748.1\|1439404_1439650_-\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|193608	cd09641, Cas3''_I, CRISPR/Cas system-associated protein Cas3''. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; HD-like nuclease, specifically digesting double-stranded oligonucleotides and preferably cleaving at G:C pairs; signature gene for Type I.	3.02963e-10
NZ_CP020873.1\|WP_085659740.1\|1427425_1428988_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.69011e-13
NZ_CP020873.1\|WP_085659735.1\|1420186_1420945_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	9.05607e-72
NZ_CP020873.1\|WP_085659741.1\|1432036_1432327_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.67372e-31
NZ_CP020873.1\|WP_085659738.1\|1425292_1426264_+\|hypothetical-protein	gnl\|CDD\|350098	cd08984, GH43-like, Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43)-like subfamily includes uncharacterized enzymes similar to those with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	0.000381407
NZ_CP020873.1\|WP_085659739.1\|1426667_1427408_-\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	2.7343e-57
NZ_CP020873.1\|WP_085659746.1\|1436667_1437381_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.42524e-105
NZ_CP020873.1\|WP_085660616.1\|1410201_1410606_+\|methylmalonyl-CoA-epimerase	gnl\|CDD\|319912	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE). MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.	2.1631e-45
NZ_CP020873.1\|WP_085659750.1\|1441500_1442259_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	1.11577e-39
NZ_CP020873.1\|WP_085659742.1\|1432329_1433361_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP020873.1\|WP_085659745.1\|1434907_1436671_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	0
NZ_CP020873.1\|WP_085659747.1\|1437401_1439408_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.79339e-57

>NZ_CP020873.1|WP_085659740.1|1427425_1428988_-|IS21-family-transposase
MANKPLDMLQIRRCLVLLQEARSVRQIHRLTGIHRNTVKSYVERFKHSGKTYAELLALPDHDLAELIYPPRNNHQADDRYLYLSGRLQHYADELKRPHVTRQRLWEEYLEQQPHGYRYAQFCLHLDRYIQQHEPTMPQVHHPGDKQQIDFAGDPLRYYDPVAHEWINCPVLVCSLPCSAMFYVEPLTSSRQEHLIPALNSALAYFGGVPRNILSDNMAQVVTKPSRYEPVFTELVEQWALHYRTNMQATRVGKPKDKASVENSVHIAYQQIYAAMRNECHHSLKALKHRVRELLEKANERTMTAYGKSRKERFLELEKEHLVPLPPKHFVYKHQAKAKVKKNYHVILGEDWHQYSVPHAYIGQRVKLIYDGDVVEIFCEYKRIAVHQRAFVRNGYSTIKEHMPESHRNYLLQKGWTPDDFLEKAHEIGPGTEEVVIRFLAAKAFPEQSYDACIGLLRLAKGFGRKRLENACSLALQGSRVTYRIVKTILENNRDKLVLPTEEQAPMLPFHENIRGKHFYN
>NZ_CP020873.1|WP_085659739.1|1426667_1427408_-|ATP-binding-protein
MNTQLTLDQLRRMRLHGMAEAYDALLTLPVQEQPTADLMIGQLVEAERIYRKEQTTRRYLQQSKIRYPALLEQIHCNTERNLSQQQLLSLADGRFIERGENVLITGATGCGKSYLASALGRQACSLGYSTLYLSMNRMMEQLTQVKLDGTYLKWLNKLEKTRLLIIDDFGLQPLDQPTRLALLQILEDRYGKQAAIFTAQLPVAEWHDVIAEPTIADSILDRLLSNAHRIELKGPSLRRQKQEKNM
>NZ_CP020873.1|WP_085659738.1|1425292_1426264_+|hypothetical-protein
MIKKLIPVIAFIAGIATAYIINDHRSSIRKFIRNTLTYNAQQTDDCGHWSIGIYEGPTPFDLAPPPDVRNPVLTCRNVSDVASEFVADPFMIARSDSLYMFFEVLNKESGHGDIGYATSTDARKWQYHRVVLDETYHLSYPYVFLWDDEYFMIPESHQDLSVKLYRASSFPEKWEYAATLLSGYHYVDPSIVRRNDTWWMFVSIPDSDVLNLYYAKELTGPWTPHPMNPIVKFNKHSARPAGRLFDYQGRLYRVAQDDAPTYGIQVFAYEITSLSETYYKERPAASGPLITKTGSGWNAEGMHHIDVQHIGGKWIGVVDGRNR
>NZ_CP020873.1|WP_085659737.1|1423774_1425286_+|hypothetical-protein
MNTLPYATPVPSRNSGKRTVIGNMATMPERLHCLYKALGSILPQLDHLNLYLNNFPRTFNLYEHYPELEAYSHIIQFTSSRDIGDRRDHARFTDALKYGQGHYYVCVDDDIVYPADYIERLAGRSETYHDKVALCIHGYGLWENLQDFTSDRARASRYFHFEHELASDALVDVAGIGTLFCPAELIEEDFSSPPYGFSDLVLAKYFFTRSIPVVAIRRQKSWLKGIPNKSTLYKEARSENNDAKTYARELAGIMKNISRKNCTTLLDLNQTPEEIVCSDTALCLPDDIDRHEIYICLSGVNCGTKIKAVCIALQKALVNILSRRMNICFLDDGSDDDTRRQIATHAFTHLSRYRISTFRNDASQGPSCSKAMLVNEARKKTGRKLFCMLDLDRTVTPVLGRLLHAIIMQGYHQALYSTTGRAPDTIIWWEESGTLMDFKALRNARNKRDSRQHKAFLDALLDTLPQYCRKKLRYKLTTAPPPFHRQQRKLHQVLHSLLVKSRK
>NZ_CP020873.1|WP_085659735.1|1420186_1420945_+|SDR-family-NAD(P)-dependent-oxidoreductase
MRSEKLSSPAGGTITGNAQVPCRRTCRLLEYQGRHLPLDLSDTCSAEHLVAFCREKQLVIDILVNNAGFGLAGPFSNAQAEEIENMVNLHNLTMMKLSSLLLPDMLKRGQGGIINVSSITAFQGVPFNAVYAATKAFTLSLSEALHEELKGSGVHVCAVCPGLTKTPLFEKTGVDPHKTLLPVGDPAPVVKAAIKALERNKPLVVPGLVNKILIHGGRLLPRSLMVRMGVLLARNQTSDCRRPSTRNSCNNG
>NZ_CP020873.1|WP_085659734.1|1417025_1417787_-|slipin-family-protein
MLSLNLIPLLVLLVAFLASAVKIIPEYERAVVFRLGRIIGSKGPGLIILIPVIDKMVRIDLRTVTLDVPPQDIITKDNVTVKVSAVVYFRVLDAIKAVVDVEDFYFATSQLAQTTLRSTCGQGEMDHLLSERDEINEQIQSILDKDTEPWGVKVSKVEIKEIDLPIEMQRAMAKQAEAERERRAKVINAEGEFQAAKRLNEAAAIISENPGALQLRYLQTLQDIAAENNSTTVFPIPIDLFKPFLENLKTKES
>NZ_CP020873.1|WP_085659733.1|1416561_1417029_-|universal-stress-protein
MIKIRKILCPVDFSDASRKSIRYADEFARGMGASLHLLNVVEPRPMAVDMSLSYVPLEEDLEKAAMEDLEQIADEERAHGLNVTTEVEIGTPSEIILEKAVELDVNLIILGSHGKTGLSRILMGSVAESVVRKAACPVLIVKAEEKEFIEEDEGG
>NZ_CP020873.1|WP_085659732.1|1415567_1416587_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB
MNTAGPGRTAMTTPDIVEGIRSGRRSALSRAITLIESQRDDHQEKAHDILDACLEFRADSFRIGITGPPGVGKSTLIEALGEEILSDSSHRLAVLSIDPSSERSRGSILGDKARMEKLSALPDVFIRPSPSSGHLGGTSPKTHEVIMLCEAAGYNVIIVETVGVGQSEISVESMVDYILLLIQPGSGDELQGMKRGIMEIADAIAVTKSDVPSSDAVERSVASCRSALGLLRPSYPCWKPSVFTCSSVNKTGIREIWQNAEEFARTLKEHGLFDHHRQEQLEKLFRAITEQELHRAFFKHPLVTDTLPAISADIRNNRLSPFSGARRVVGKVIPLHPPR
>NZ_CP020873.1|WP_085660616.1|1410201_1410606_+|methylmalonyl-CoA-epimerase
MLTNIDHIAIAVRDLDSAIERYIALTGISRESVHVEEVPAEHVRVAFLKIGTTKIELLEPVGDKGAIAAFLEKRGEGLHHIALETPDLEAETERTQSQGLHPLSAPSAGADNKKIVFFNPKDTNRVLIEFVQKM
>NZ_CP020873.1|WP_085659731.1|1408166_1410062_+|propionyl-CoA-synthetase
MSLSYDNLYRQSIEHPEEFWAEAAEKLHWYKQWDKVLDSSNPPFYRWFAGGKTNTCYNALDRHVDEGRGNDTAVIYDSPVTGAKEKFTFREFRDKVALFAGALQSRGVRKGDRVIIYMPMIPEALIAMLACARIGAVHSVVFGGFASHELAVRIDDCKPKVIISASCGIERDKVIDYKRLLDFAIELAHFKPEICIVRQRPQLRAELNEERDLTWKQALLGAEPAACVPVESSDPLYILYTSGTTGKPKGVVRDNGGHMVALKWSMEHVYGIKPGETYWAASDVGWVVGHSYIVYAPLLNGNATIIFEGKPVGTPDPGVFWRIIEEYDVSVFFTAPTAFRAIKKEDPKGNYIRKYDLSRFRTLFLAGERADPDTVKWAEEQLDVPVIDHWWQTETGWAIAANCQGIEPGPVKYGSASKPVPGYNVQVVNHKMEKLEAGQMGDIVISLPLPPGTMLTLWKADNHFIESYMKTYPGYYQTSDAGYIDEDGYIYIMSRTDDIINVAGHRLSTGAIEAELSAHPDVAESAVIGVADELKGEIPVGFLVLKSGVDTPHSQIIRHVIEYVRENIGPVAAFKQAVIVDRLPKTRSGKILRATMRKIANGEEYSMPATIDDPAILDEIITALKSIGYAK
>NZ_CP020873.1|WP_085659741.1|1432036_1432327_-|CRISPR-associated-endonuclease-Cas2
MVVLVTYDVSTEDREGRRRLRRIAKMCQNYGQRVQYSVFECTVDPAQWTLLRAQLVDIMDREKDSLRFYHLGSNWKHRVEHEGIKEPRDFDAPLIL
>NZ_CP020873.1|WP_085659742.1|1432329_1433361_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLQNTLYVSTQGAYLSKDGECVLVKIDGEEKSRIPIHILDSIVCFGQISVSPYLMGFCAEKGVAVTFLSQYGKFLCSVQGPVRGNILLRRAQYRMADDPAVSGVLARSFVIGKIANARVTISRIVRDHVHKVDVDRLKTAQQLLAGAVKHLRDETDPDRIRGIEGDAAKIYFSVFDQGIISGDSAFGFNGRNRRPPLDRVNCLLSFFYTLLTHDIRSALESVGLDPAAGFLHRDRPGRPSLALDMLEEFRSYVADRLTLTLINRGQVKPGDFEIAESGAVLLKDDARKEILVAYQNRKSEEIMHPFLAEKMPVGLLWHMQALLLARYIRGDIEAYPPFVWS
>NZ_CP020873.1|WP_085659743.1|1433357_1434002_-|CRISPR-associated-protein-Cas4
MYAESDLIALSAVQHYVFCSRQCALIHLEQIWEENLYTAEGRQMHERVDGGENSYRPGVKITRSMPLRSLEYGISGVADVVEWHKKDGELKSFPVEYKRGKPKFHDADRVQLCLQALCLEEMLHCDIDRGALFYGKTWHRHDVVFDNVLRAKTVAAVEATHHMFQSGITPLPDPGPKCKQCSLVDLCLPEAISRKKAPALYLNKLYKSMSEDEV
>NZ_CP020873.1|WP_085659744.1|1434005_1434905_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSSITKRYDFVLLFDVQDGNPNGDPDAGNLPRIDAETGMGLVTDVCLKRKVRNYVQLSGQEIFIKEKAVLNNKIGEAYAKINIDLNDVPQDPKDGKKRNKTGTAQGGEVDKGRAQMCETYYDIRTFGAVMSTGANAGQVRGPIQLTFARSVEPVVALEHSITRMAITTEADAEKQSGDNRTMGRKYTVPYGLYRAHGFVSAHLAHQTGFSHDDLELFWEALQNMFEHDRSAARGMMSTRGLYVFEHHSALGNAPAHKLFERIQVERVPGSEGPARSFNDFQVDVDDSGLDGVTLLRKLG
>NZ_CP020873.1|WP_085659745.1|1434907_1436671_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILQALYDYYQRKADDNNSCVAPEGFEWKEIPFVIVIDRDGNLVSLQDTREGDAKKKTGKRYLLPKSVGRSGSNSWQTSFLLWDHYGYVVGHPKSDSDKDQAMAQKQFSSFIQKLQSLPSELKNDDGVLGVLRFYEKNGYEKVKSIENWGDCAKIVGCNMSFRLDGDSELIPCRDAVQSYVKSQTGENSGGVTGLCLVTGKMGAIARTHTDTPINKDSKKFVSFQKNSGYDSYGKQQGFNAPISQSAEFAYTTALNILLGKNSKNKVQVGDATAVFWAQHKNDFEEIFPAFFGYPKDDPDADVKAVKALYEGILSGQANTDTETRFYVLGLAPNSARIAVRFWHTGRIGDFSINIRQHFDDHQIIRSQNDSRHYSMFWILSSMAHDSKIDNVPPNLSAQIFQSVITGGLYPITMLQQTIRRIRATQAKDLKRYSIQASILKAYLNRFSRIYNKKSQEIQVALDPTNHNSGYCLGRLFAVLERIQEKASSSSLNTTIRDRFYGAASSTPVTVYPQLLKLKNHHLSKIDERSKRYYERLVGEIIDGLGEGMPSHLAMEDQARFAIGYYHQRQDFFKKKDSENKNDSEGE
>NZ_CP020873.1|WP_085659746.1|1436667_1437381_-|type-I-C-CRISPR-associated-protein-Cas5
MEHWNKTFCLEVRGDYACFTRPEMKVERVSYDVITPSAARGILEAVFWKPAIRWRVRKIEVLNPVKWISVRRNELGQTASTRSDGIFIDQARQQRAGLFLRDVAYRLHAELEFIPMAKRVNSSQPVPETLHSSWETNELRKDENPGKYYGIFERRARKGQCFNQPYLGCREFSCEFRLVDNMENEPEPIAENRDLGFMLYDLDFDKNLKEPPPAFFRAKMEMGVIDVPAWESEEVRK
>NZ_CP020873.1|WP_085659747.1|1437401_1439408_-|CRISPR-associated-helicase-Cas3'
MKKIDHSTAGALHAVEEAGGYGRILAYLIAGHHAGLPDWYPEPGTGGALSGRLENKEHLEKALSGLPPSHVLKFVMPTTYPCNQQSGDSDLAHVWIRMLYSCLVDADFLDTEAFMEPEKALSRKSDLSLAVLKKRFDAYMDEKQAEAHSTPINAARQNILIQCRRRASLVPGLFSLTVPTGGGKTLSSMAFALEHALKYGKDRIIVAIPFTSIIEQTAEEYRKIFGDEAVLEHHSNLDPKKESVRNRLASENWDAPIIVTTNVQLFESLFAAKSSACRKLHNIVNSVVILDEVQTLPTDYLQPIISILRVLSNYFNTSIVLCTATQPVLTGKIGSGTAALQGFENDAVRELIDDPKRLFQIFQRVRIELMEGEADKRLSWEQVAESMMKHRQALAIVNTRKDCRSLYDIMPDGTVHLSALMCPEHRSDVIFEIKHKLRDDKPVHVVSTQLLEAGVDIDFPIVFRAFSGLDRIAQAAGRCNREGRLENGKVFVFNPPDASPSGLLLKAEHAGQEMFRVFPELASSLMPEAFQRYFTLYFNGLNDFDKKEILDLLAGPDVTEFKIQFRTAAWRFKIINDANQHGIIVKYNSENKKAHVEALIEQLKYAGPSRMLMRALQRFSVNVYDNDLRQMRDNGTIEEINGVWVQTVPDLYSSVFGVDIDATPNFYL
>NZ_CP020873.1|WP_085659748.1|1439404_1439650_-|CRISPR-associated-endonuclease-Cas3''
MSSTYKHIVAHLRLNEEGRMEYHMLSDHSAGVSERAAEFAAKFGNADWAGVAGLLHDLGKYSPEWQEYIRANNGEYEDGEE
>NZ_CP020873.1|WP_085659749.1|1440761_1441511_-|ATP-binding-cassette-domain-containing-protein
MGSEILRCNGLSKKFGQTTVLESFSCSLRRGEVMGIVGPSGCGKTTILRMIAGLEQPTSGTVELVRPDARLAYIFQEERLIPWFTVQENIRFVLSQKHQERTSRELVRDALEAVRLIGYADYYPDQLSGGMRQRVALARGLAYQPDIFLMDEPFSGLDFPLRMQMIEFLDELLKETGISVIFISHDTREITHLCDRVAVLNGSPGRLGHIIELQPKNRRMEHPGYLQKMEEEMLRCMVEGSDENAEKIT
>NZ_CP020873.1|WP_085659750.1|1441500_1442259_-|ABC-transporter-permease-subunit
MRSLFFFLLGISGVVVLWFVLCAVYPPAIIPPPLSVFHALGDVVADGYFMADLQVTLWRVVGSFAASLVVGTILGILAGLRKELLDMLHPVMVLAESAPPVAWLVIAILLFGMGSAPSFMVGLSAAVPIFFFNTVSAVKGLDRDLIEMAVAYKVRRSKLFVSVYLPGILMSSIAASSASLSVIWRVIIMAEAFTAARGFGPRLWGAYLYSDADVVYAYIVLIVLLGFSLEYGVIRPGVNMLKSKLRIERDGK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP020873_3	3.12\|1429932\|36\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1429932-1429967	36	NC_025028	Uncultured bacterium pMCBF6 plasmid pMCBF6, complete sequence	35119-35154	0	1.0
NZ_CP020873_3	3.19\|1430394\|33\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430394-1430426	33	MH617608	Microviridae sp. isolate ctbj976, complete genome	588-620	2	0.939
NZ_CP020873_3	3.19\|1430394\|33\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430394-1430426	33	MH617086	Microviridae sp. isolate ctcc904, complete genome	684-716	2	0.939
NZ_CP020873_3	3.19\|1430394\|33\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430394-1430426	33	MH617099	Microviridae sp. isolate ctch628, complete genome	759-791	3	0.909
NZ_CP020873_3	3.19\|1430394\|33\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430394-1430426	33	MH572425	Microviridae sp. isolate SD_MC_58, complete genome	573-605	3	0.909
NZ_CP020873_3	3.19\|1430394\|33\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430394-1430426	33	MH622933	Microviridae sp. isolate ctcd651, complete genome	552-584	3	0.909
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MH617576	Microviridae sp. isolate ctcc822, complete genome	1852-1888	5	0.865
NZ_CP020873_3	3.15\|1430132\|34\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430132-1430165	34	MH572404	Microviridae sp. isolate SD_SF_20, complete genome	1797-1830	6	0.824
NZ_CP020873_3	3.18\|1430329\|33\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430329-1430361	33	NZ_CP025980	Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence	41031-41063	6	0.818
NZ_CP020873_3	3.19\|1430394\|33\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430394-1430426	33	MH617765	Microviridae sp. isolate cth992, complete genome	582-614	6	0.818
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MG945454	UNVERIFIED: Microviridae sp. isolate 8431-1602, complete genome	3954-3990	6	0.838
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MG945147	UNVERIFIED: Microviridae sp. isolate 192-18012, partial genome	2723-2759	6	0.838
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MH617439	Microviridae sp. isolate ctdi816, complete genome	1762-1798	6	0.838
NZ_CP020873_3	3.33\|1431327\|35\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1431327-1431361	35	MH572466	Microviridae sp. isolate SD_MF_40, complete genome	818-852	6	0.829
NZ_CP020873_3	3.33\|1431327\|35\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1431327-1431361	35	MH572424	Microviridae sp. isolate SD_MC_87, complete genome	818-852	6	0.829
NZ_CP020873_3	3.10\|1429800\|34\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1429800-1429833	34	MH992207	Apis mellifera associated microvirus 25 isolate INH_SP_247, complete genome	1730-1763	7	0.794
NZ_CP020873_3	3.10\|1429800\|34\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1429800-1429833	34	MG945883	UNVERIFIED: Microviridae sp. isolate 830-1602, partial genome	1315-1348	7	0.794
NZ_CP020873_3	3.19\|1430394\|33\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430394-1430426	33	MN582073	Microviridae sp. ctbuH30, complete genome	567-599	7	0.788
NZ_CP020873_3	3.22\|1430593\|34\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430593-1430626	34	MH572302	Microviridae sp. isolate SD_SC_37, complete genome	3648-3681	7	0.794
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MK496794	Capybara microvirus Cap3_SP_445, complete genome	1906-1942	7	0.811
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MH029529	Gokushovirinae environmental samples clone NHS-Seq407, complete sequence	1812-1848	7	0.811
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	KT264783	Gokushovirus WZ-2015a isolate 35Fra05, complete genome	2261-2297	7	0.811
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MG945399	UNVERIFIED: Microviridae sp. isolate 3685-1801, complete genome	4980-5016	7	0.811
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MH572281	Microviridae sp. isolate SD_SC_105, complete genome	1708-1744	7	0.811
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MG945296	UNVERIFIED: Microviridae sp. isolate 1814-1801, partial genome	4342-4378	7	0.811
NZ_CP020873_3	3.28\|1430996\|33\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430996-1431028	33	MK614706	Gammaproteobacteria virus GOV_bin_2604, complete genome	23764-23796	7	0.788
NZ_CP020873_3	3.19\|1430394\|33\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430394-1430426	33	MH029524	Gokushovirinae environmental samples clone NHS-Seq376, complete sequence	3442-3474	8	0.758
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MG945715	UNVERIFIED: Microviridae sp. isolate 1982-1801, complete genome	4759-4795	8	0.784
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MG945152	UNVERIFIED: Microviridae sp. isolate 346-1801, partial genome	2655-2691	8	0.784
NZ_CP020873_3	3.4\|1429400\|34\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1429400-1429433	34	MG945712	UNVERIFIED: Microviridae sp. isolate 1921-1801, complete genome	291-324	9	0.735
NZ_CP020873_3	3.21\|1430524\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430524-1430560	37	MH572281	Microviridae sp. isolate SD_SC_105, complete genome	281-317	9	0.757
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MK496823	Capybara microvirus Cap3_SP_645, complete genome	1782-1818	9	0.757
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	MH617216	Microviridae sp. isolate ctcb794, complete genome	1892-1928	9	0.757
NZ_CP020873_3	3.27\|1430927\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430927-1430963	37	KT264770	Gokushovirus WZ-2015a isolate 22Mky17, complete genome	2123-2159	9	0.757
NZ_CP020873_3	3.2\|1429266\|35\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1429266-1429300	35	NZ_CP029650	Staphylococcus aureus strain AR_0471 plasmid unnamed1, complete sequence	120-154	10	0.714
NZ_CP020873_3	3.21\|1430524\|37\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430524-1430560	37	MH617663	Microviridae sp. isolate ctcc12, complete genome	290-326	10	0.73
NZ_CP020873_3	3.25\|1430793\|34\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430793-1430826	34	MT771346	Gordonia phage MichaelScott, complete genome	24532-24565	10	0.706
NZ_CP020873_3	3.16\|1430198\|33\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1430198-1430230	33	MN727882	Geobacillus phage GBK1, complete genome	16931-16963	11	0.667
NZ_CP020873_3	3.29\|1431061\|35\|NZ_CP020873\|PILER-CR,CRISPRCasFinder,CRT	1431061-1431095	35	MN035551	Leviviridae sp. isolate H1_Bulk_29_scaffold_154 hypothetical protein (H1Bulk29154_000001), hypothetical protein (H1Bulk29154_000002), and RNA-dependent RNA polymerase (H1Bulk29154_000003) genes, complete cds	1306-1340	11	0.686

1. spacer 3.12|1429932|36|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to NC_025028 (Uncultured bacterium pMCBF6 plasmid pMCBF6, complete sequence) position: , mismatch: 0, identity: 1.0

cacttctgcaacccgcgcttccatcatttccgaact	CRISPR spacer
cacttctgcaacccgcgcttccatcatttccgaact	Protospacer
************************************

2. spacer 3.19|1430394|33|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH617608 (Microviridae sp. isolate ctbj976, complete genome) position: , mismatch: 2, identity: 0.939

cgattattttacgtcctgtctgccttggccgca	CRISPR spacer
tgattattttacgtcctgtctgccttggcctca	Protospacer
.***************************** **

3. spacer 3.19|1430394|33|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH617086 (Microviridae sp. isolate ctcc904, complete genome) position: , mismatch: 2, identity: 0.939

cgattattttacgtcctgtctgccttggccgca	CRISPR spacer
cgattattttacgtcgtgtttgccttggccgca	Protospacer
*************** ***.*************

4. spacer 3.19|1430394|33|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH617099 (Microviridae sp. isolate ctch628, complete genome) position: , mismatch: 3, identity: 0.909

cgattattttacgtcctgtctgccttggccgca	CRISPR spacer
tgattactttacgtcttgtctgccttggccgca	Protospacer
.*****.********.*****************

5. spacer 3.19|1430394|33|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH572425 (Microviridae sp. isolate SD_MC_58, complete genome) position: , mismatch: 3, identity: 0.909

cgattattttacgtcctgtctgccttggccgca	CRISPR spacer
tgattattttacgtcgtgtctcccttggccgca	Protospacer
.************** ***** ***********

6. spacer 3.19|1430394|33|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH622933 (Microviridae sp. isolate ctcd651, complete genome) position: , mismatch: 3, identity: 0.909

cgattattttacgtcctgtctgccttggccgca	CRISPR spacer
tgattattttacgtcgtgtctgccgtggccgca	Protospacer
.************** ******** ********

7. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH617576 (Microviridae sp. isolate ctcc822, complete genome) position: , mismatch: 5, identity: 0.865

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
acctcgcgctgatgagcagtattagacatgcgctctt	Protospacer
**.*  * .****************************

8. spacer 3.15|1430132|34|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH572404 (Microviridae sp. isolate SD_SF_20, complete genome) position: , mismatch: 6, identity: 0.824

attttgcataacagcagaagctcctgcaggagtt	CRISPR spacer
gttttgcataacagcagaagcccctgcggggcta	Protospacer
.********************.*****.**. *

9. spacer 3.18|1430329|33|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025980 (Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence) position: , mismatch: 6, identity: 0.818

-gctatacgcgggttttgggggtgagatgatcaa	CRISPR spacer
tgccattc-cgcgttttggtggtgagatgatcat	Protospacer
 **.** * ** ******* *************

10. spacer 3.19|1430394|33|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH617765 (Microviridae sp. isolate cth992, complete genome) position: , mismatch: 6, identity: 0.818

cgattattttacgtcctgtctgccttggccgca	CRISPR spacer
tgattattttacgtcgtgtctgccgtgggttca	Protospacer
.************** ******** *** . **

11. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MG945454 (UNVERIFIED: Microviridae sp. isolate 8431-1602, complete genome) position: , mismatch: 6, identity: 0.838

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
acctctcgctgatgagcagtattagacatacgctctt	Protospacer
**.* .* .********************.*******

12. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MG945147 (UNVERIFIED: Microviridae sp. isolate 192-18012, partial genome) position: , mismatch: 6, identity: 0.838

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
acctcacgttgatgagccgtattagacatacgctctt	Protospacer
**.*  * ********* ***********.*******

13. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH617439 (Microviridae sp. isolate ctdi816, complete genome) position: , mismatch: 6, identity: 0.838

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
acctcgcgttgatgagcagtatttgacatacgctctt	Protospacer
**.*  * *************** *****.*******

14. spacer 3.33|1431327|35|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH572466 (Microviridae sp. isolate SD_MF_40, complete genome) position: , mismatch: 6, identity: 0.829

ctgatgcaaccgcagctacgattaatcagctccgt	CRISPR spacer
cggctgcaacggcagctacaattaatcagctcagg	Protospacer
* * ****** ********.************ *

15. spacer 3.33|1431327|35|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH572424 (Microviridae sp. isolate SD_MC_87, complete genome) position: , mismatch: 6, identity: 0.829

ctgatgcaaccgcagctacgattaatcagctccgt	CRISPR spacer
cggctgcaacggcagctacaattaatcagctcagg	Protospacer
* * ****** ********.************ *

16. spacer 3.10|1429800|34|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH992207 (Apis mellifera associated microvirus 25 isolate INH_SP_247, complete genome) position: , mismatch: 7, identity: 0.794

tgatgcaactgcagcaactatcaaccagctacgg	CRISPR spacer
tgatgcaactgctgcaactattaaccaattcaga	Protospacer
************ ********.*****..*  *.

17. spacer 3.10|1429800|34|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MG945883 (UNVERIFIED: Microviridae sp. isolate 830-1602, partial genome) position: , mismatch: 7, identity: 0.794

tgatgcaactgcagcaactatcaaccagctacgg	CRISPR spacer
tgatgcatctgctgcaactatcaacgatttgcgt	Protospacer
******* **** ************ * .*.**

18. spacer 3.19|1430394|33|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MN582073 (Microviridae sp. ctbuH30, complete genome) position: , mismatch: 7, identity: 0.788

cgattattttacgtcctgtctgccttggccgca	CRISPR spacer
tgattattttacgtcttgtcttcctactcctca	Protospacer
.**************.***** ***   ** **

19. spacer 3.22|1430593|34|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH572302 (Microviridae sp. isolate SD_SC_37, complete genome) position: , mismatch: 7, identity: 0.794

ccgcgctttcaaaagtaacgtctccaaccgtgtt	CRISPR spacer
cagcgctttcaaatgtaacgtttccaaccgatac	Protospacer
* *********** *******.********   .

20. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MK496794 (Capybara microvirus Cap3_SP_445, complete genome) position: , mismatch: 7, identity: 0.811

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
acttctctttgatgagcagtattagacatttgagttt	Protospacer
**** .*********************** .*  .**

21. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH029529 (Gokushovirinae environmental samples clone NHS-Seq407, complete sequence) position: , mismatch: 7, identity: 0.811

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
gcttcacgctgatgcgcagtattagacatacgctctt	Protospacer
.***  * .***** **************.*******

22. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to KT264783 (Gokushovirus WZ-2015a isolate 35Fra05, complete genome) position: , mismatch: 7, identity: 0.811

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
gcttgtctttgataagcagtattagacatcatttctt	Protospacer
.****.*******.***************   .****

23. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MG945399 (UNVERIFIED: Microviridae sp. isolate 3685-1801, complete genome) position: , mismatch: 7, identity: 0.811

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
acctctcgctgatgagcagtattggacatacgctctt	Protospacer
**.* .* .**************.*****.*******

24. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH572281 (Microviridae sp. isolate SD_SC_105, complete genome) position: , mismatch: 7, identity: 0.811

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
acctcgcgctgatgagcagtgttagacatacgctctt	Protospacer
**.*  * .***********.********.*******

25. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MG945296 (UNVERIFIED: Microviridae sp. isolate 1814-1801, partial genome) position: , mismatch: 7, identity: 0.811

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
acctcacgctgatgggcagtattagacatgagctctt	Protospacer
**.*  * .*****.*************** ******

26. spacer 3.28|1430996|33|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MK614706 (Gammaproteobacteria virus GOV_bin_2604, complete genome) position: , mismatch: 7, identity: 0.788

gacttccaccactactattatatg-atcctcgtc	CRISPR spacer
gatttccaccacttctattatatgtaccagcat-	Protospacer
**.********** ********** *.*  *.*

27. spacer 3.19|1430394|33|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH029524 (Gokushovirinae environmental samples clone NHS-Seq376, complete sequence) position: , mismatch: 8, identity: 0.758

cgattattttacgtcctgtctgccttggccgca	CRISPR spacer
tgattattttacgtcttgtttgccttttgttca	Protospacer
.**************.***.******   . **

28. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MG945715 (UNVERIFIED: Microviridae sp. isolate 1982-1801, complete genome) position: , mismatch: 8, identity: 0.784

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
acttccctttggtgagcagtattagacatttcagcct	Protospacer
**** ******.***************** .   *.*

29. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MG945152 (UNVERIFIED: Microviridae sp. isolate 346-1801, partial genome) position: , mismatch: 8, identity: 0.784

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
acttgtctttgatgagcagtattagatatatttgttt	Protospacer
*****.********************.**.. . .**

30. spacer 3.4|1429400|34|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MG945712 (UNVERIFIED: Microviridae sp. isolate 1921-1801, complete genome) position: , mismatch: 9, identity: 0.735

ccgacccaatctgtcgccatactcgccacaatgg	CRISPR spacer
tcgaaagaatctgtcaccatactctccacaagaa	Protospacer
.***   ********.******** ****** ..

31. spacer 3.21|1430524|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH572281 (Microviridae sp. isolate SD_SC_105, complete genome) position: , mismatch: 9, identity: 0.757

gagtcaccgggatttttttgttcacccatgaattttt	CRISPR spacer
ctatccgcaggatttttttgttcaccattgaatttct	Protospacer
  .**  *.*****************  *******.*

32. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MK496823 (Capybara microvirus Cap3_SP_645, complete genome) position: , mismatch: 9, identity: 0.757

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
acctgcctttgataagcagtattagacatttcagtct	Protospacer
**.**********.*************** .   ..*

33. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH617216 (Microviridae sp. isolate ctcb794, complete genome) position: , mismatch: 9, identity: 0.757

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
gtagcccgctgataagcagtattagacattcgctctt	Protospacer
..   ** .****.*************** *******

34. spacer 3.27|1430927|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to KT264770 (Gokushovirus WZ-2015a isolate 22Mky17, complete genome) position: , mismatch: 9, identity: 0.757

acttgcctttgatgagcagtattagacatgcgctctt	CRISPR spacer
acctcacgctgatgggcggtattagacatgcgctcga	Protospacer
**.*  * .*****.**.*****************

35. spacer 3.2|1429266|35|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029650 (Staphylococcus aureus strain AR_0471 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

ttgcaccatattttaaaccttagatattttatcat	CRISPR spacer
aacaagaatattttagaccttagataatttatagt	Protospacer
    *  ********.********** ***** .*

36. spacer 3.21|1430524|37|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MH617663 (Microviridae sp. isolate ctcc12, complete genome) position: , mismatch: 10, identity: 0.73

gagtcaccgggatttttttgttcacccatgaattttt	CRISPR spacer
gagtcaccaggatttttctgttcaccgcaaaagcgct	Protospacer
********.********.********   .** . .*

37. spacer 3.25|1430793|34|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MT771346 (Gordonia phage MichaelScott, complete genome) position: , mismatch: 10, identity: 0.706

gaggcccggtccatcacgatgcccggcaggacaa	CRISPR spacer
ccgtcgcggtcgaccacgatgcccggcaggtagc	Protospacer
  * * ***** *.****************  .

38. spacer 3.16|1430198|33|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MN727882 (Geobacillus phage GBK1, complete genome) position: , mismatch: 11, identity: 0.667

cgcacagtaaagtttatgataaaaatctgcctt	CRISPR spacer
cgcacagcaaagtttaagataaaagaaaattac	Protospacer
*******.******** *******.   ... .

39. spacer 3.29|1431061|35|NZ_CP020873|PILER-CR,CRISPRCasFinder,CRT matches to MN035551 (Leviviridae sp. isolate H1_Bulk_29_scaffold_154 hypothetical protein (H1Bulk29154_000001), hypothetical protein (H1Bulk29154_000002), and RNA-dependent RNA polymerase (H1Bulk29154_000003) genes, complete cds) position: , mismatch: 11, identity: 0.686

tcagcgctttttcatcgcgcgtataaccttatttg	CRISPR spacer
gccaaagattttcatggcgcgtagaaccttattcc	Protospacer
 * . .  ******* ******* *********.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

555429 : 673397

105

Escherichia_phage(13.04%)

protease,transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085659057.1\|555429_556827_+\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_085659125.1\|557074_557791_+	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_085659126.1\|557839_558025_-	ferredoxin	NA	NA	NA	NA
WP_157115468.1\|558241_558880_+	DUF3793 family protein	NA	NA	NA	NA
WP_085659127.1\|558936_559227_-	ferrous iron transport protein A	NA	NA	NA	NA
WP_085659128.1\|559448_559922_-	rubrerythrin family protein	NA	NA	NA	NA
WP_157115469.1\|560067_560484_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_085659130.1\|560485_560950_+	hypothetical protein	NA	NA	NA	NA
WP_157115470.1\|560982_561768_-	DUF4857 domain-containing protein	NA	NA	NA	NA
WP_085659132.1\|561650_562925_-	DUF4857 domain-containing protein	NA	NA	NA	NA
WP_085659133.1\|562935_563823_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.5e-13	24.3
WP_085659134.1\|563913_565968_-	hypothetical protein	NA	NA	NA	NA
WP_085659135.1\|565970_566417_-	TonB-dependent receptor plug domain-containing protein	NA	NA	NA	NA
WP_085659136.1\|566757_568614_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_085659137.1\|568880_570146_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	9.6e-99	47.5
WP_085659138.1\|570169_571492_+	serine hydroxymethyltransferase	A0A240F2Y9	Aeromonas_phage	8.5e-90	47.6
WP_085659139.1\|571601_573506_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.8e-56	35.3
WP_085659121.1\|573774_574521_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_085659122.1\|574527_575061_+	biopolymer transporter ExbD	NA	NA	NA	NA
WP_085659123.1\|575062_575626_+	biopolymer transporter ExbD	NA	NA	NA	NA
WP_085659140.1\|575609_576440_+	energy transducer TonB	NA	NA	NA	NA
WP_085659141.1\|576444_576681_-	hypothetical protein	NA	NA	NA	NA
WP_085659142.1\|576667_577873_-	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_085659143.1\|577869_578124_-	hypothetical protein	NA	NA	NA	NA
WP_085659144.1\|578127_579423_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_085659145.1\|579543_580038_-	cupin domain-containing protein	NA	NA	NA	NA
WP_085659146.1\|580024_580540_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.0e-27	45.3
WP_085659147.1\|580676_582104_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA
WP_157115471.1\|582165_583311_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_085660531.1\|583326_583653_+	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_085659148.1\|583686_584658_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_085659149.1\|584627_586577_-	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.0e-55	29.5
WP_085659150.1\|588320_588623_+\|transposase	transposase	NA	NA	NA	NA
WP_157115472.1\|588583_589501_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-53	38.5
WP_085659152.1\|589581_590382_+	N-formylglutamate amidohydrolase	NA	NA	NA	NA
WP_085659153.1\|590378_592307_+	DUF1704 domain-containing protein	NA	NA	NA	NA
WP_085659154.1\|592303_593350_+	glutathione synthase	NA	NA	NA	NA
WP_085659155.1\|593459_594632_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_085660532.1\|594772_595225_+	nucleoside deaminase	NA	NA	NA	NA
WP_085659156.1\|595250_596270_-	hypothetical protein	NA	NA	NA	NA
WP_085659157.1\|596354_597623_-	nitronate monooxygenase	NA	NA	NA	NA
WP_085659158.1\|597949_598693_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_085659159.1\|604970_605240_+	DUF4404 family protein	NA	NA	NA	NA
WP_085659160.1\|605288_606617_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.1e-120	53.2
WP_085659161.1\|607176_607959_+	hypothetical protein	NA	NA	NA	NA
WP_085659162.1\|608660_610157_-	Fic family protein	NA	NA	NA	NA
WP_012506645.1\|610382_610673_+\|transposase	transposase	NA	NA	NA	NA
WP_085659163.1\|610696_611536_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_085659164.1\|611790_612981_+	AAA family ATPase	NA	NA	NA	NA
WP_085659165.1\|613256_613805_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.4e-38	43.8
WP_085659166.1\|613767_614109_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_157115473.1\|614105_614447_-\|transposase	transposase	NA	NA	NA	NA
WP_085659168.1\|614688_615729_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_157115474.1\|617515_618301_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	1.1e-28	33.7
WP_085659169.1\|618996_619572_-	hypothetical protein	NA	NA	NA	NA
WP_085659170.1\|620183_620936_+	YdcF family protein	NA	NA	NA	NA
WP_085659171.1\|621142_621979_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_085659172.1\|622226_623768_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_085659173.1\|624022_624508_+\|transposase	transposase	NA	NA	NA	NA
WP_157115475.1\|624504_625521_+\|transposase	IS3 family transposase	A0A2P1JR32	Mycobacterium_phage	1.1e-07	27.0
WP_085659175.1\|627805_628303_-	hypothetical protein	NA	NA	NA	NA
WP_157115476.1\|628582_629299_-	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_157115477.1\|629390_629585_-	hypothetical protein	NA	NA	NA	NA
WP_085660535.1\|629674_631117_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	2.4e-53	29.1
WP_085659178.1\|632015_632891_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.9e-103	61.1
WP_085659179.1\|633016_633382_+	four helix bundle protein	NA	NA	NA	NA
WP_085659180.1\|633452_633998_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A1D7XFA9	Escherichia_phage	3.7e-39	47.1
WP_085659181.1\|634154_635027_+	dTDP-4-dehydrorhamnose reductase	A0A140G5S3	Enterobacteria_phage	2.3e-35	39.7
WP_085659182.1\|635266_636283_+	dTDP-glucose 4,6-dehydratase	K7QJG5	Escherichia_phage	3.7e-85	48.9
WP_085659183.1\|636477_636990_+	hypothetical protein	NA	NA	NA	NA
WP_085659184.1\|637043_637544_+	S26 family signal peptidase	NA	NA	NA	NA
WP_085659185.1\|637688_638666_+	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA
WP_085660536.1\|638733_639030_+	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_085659186.1\|639026_639278_+	conjugal transfer protein	NA	NA	NA	NA
WP_085659187.1\|639277_641737_+	conjugal transfer protein TrbE	NA	NA	NA	NA
WP_085660537.1\|641751_642513_+	conjugal transfer protein	NA	NA	NA	NA
WP_157115478.1\|642523_642694_+	hypothetical protein	NA	NA	NA	NA
WP_085659188.1\|642700_643495_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
WP_157115479.1\|643458_643956_+	hypothetical protein	NA	NA	NA	NA
WP_085659190.1\|643978_644680_+	conjugal transfer protein	NA	NA	NA	NA
WP_085659191.1\|644686_645625_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA
WP_085659192.1\|645652_646933_+	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_085660538.1\|647397_647601_+	hypothetical protein	NA	NA	NA	NA
WP_085659194.1\|647852_651098_+\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	2.3e-176	35.0
WP_085659195.1\|651214_651652_+	molecular chaperone DnaK	NA	NA	NA	NA
WP_085659196.1\|651744_653235_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.7e-44	29.7
WP_157115480.1\|653475_653739_-	hypothetical protein	NA	NA	NA	NA
WP_085659197.1\|653848_654364_+	hypothetical protein	NA	NA	NA	NA
WP_085659198.1\|654683_655556_+	ABC transporter permease	NA	NA	NA	NA
WP_085659199.1\|655552_656404_-	deoxyribonuclease IV	L7RDB2	Acanthamoeba_polyphaga_moumouvirus	3.2e-37	33.5
WP_085659200.1\|658307_658910_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.0e-25	37.2
WP_085659201.1\|658996_660571_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	9.6e-64	45.6
WP_085659202.1\|660966_661935_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_085659203.1\|662017_663943_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_085659204.1\|664349_665483_-	serine hydrolase	A0A0B5A438	Mycobacterium_phage	5.5e-05	26.8
WP_085659205.1\|665496_666378_-	MCE family protein	NA	NA	NA	NA
WP_085659206.1\|666396_667131_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-27	33.5
WP_085659207.1\|667133_667928_-	ABC transporter permease	NA	NA	NA	NA
WP_085659208.1\|668034_668895_-	PHP domain-containing protein	NA	NA	NA	NA
WP_085659209.1\|669110_669959_-	undecaprenyl-diphosphatase UppP	NA	NA	NA	NA
WP_085660539.1\|669981_670653_-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
WP_085659210.1\|670685_671405_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_085659211.1\|671749_672712_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_085659212.1\|672736_673015_+\|transposase	transposase	NA	NA	NA	NA
WP_085659213.1\|673007_673397_+\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1237405 : 1270326

uncultured_Caudovirales_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085659057.1\|1237405_1238803_+\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_085659613.1\|1239084_1240284_-	ATP citrate lyase	NA	NA	NA	NA
WP_085659614.1\|1240428_1241277_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_085659615.1\|1241256_1242042_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_157115574.1\|1242038_1242707_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.3e-14	31.3
WP_085659617.1\|1242813_1243209_+	DUF87 domain-containing protein	NA	NA	NA	NA
WP_085659618.1\|1243205_1245347_+	ATP-binding protein	NA	NA	NA	NA
WP_085659619.1\|1245322_1245976_-	TMEM165/GDT1 family protein	NA	NA	NA	NA
WP_085660601.1\|1246064_1246550_-	lipocalin	A0A2K9L4H1	Tupanvirus	2.2e-11	31.4
WP_085659620.1\|1246650_1247097_+	GNAT family N-acetyltransferase	M1NMF1	Moumouvirus	8.3e-05	32.3
WP_085659621.1\|1247233_1247398_+	rubredoxin	NA	NA	NA	NA
WP_085659622.1\|1247487_1247886_+	DUF2391 family protein	NA	NA	NA	NA
WP_085659623.1\|1249178_1250426_-	ABC transporter permease	NA	NA	NA	NA
WP_085659624.1\|1250429_1251707_-	GGDEF domain-containing protein	G3MA91	Bacillus_virus	5.5e-09	25.1
WP_157115514.1\|1251715_1252630_-	hypothetical protein	NA	NA	NA	NA
WP_085659626.1\|1252907_1253924_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_085659627.1\|1253954_1255238_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA
WP_157115515.1\|1255253_1256162_+	acetylglutamate kinase	NA	NA	NA	NA
WP_085659628.1\|1256179_1257196_+	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_085659629.1\|1257202_1257649_+	arginine repressor	NA	NA	NA	NA
WP_085659630.1\|1257663_1258872_+	argininosuccinate synthase	NA	NA	NA	NA
WP_085659631.1\|1258980_1259835_-	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	3.3e-71	51.4
WP_157115516.1\|1259846_1260167_-	STAS domain-containing protein	A0A2H4J153	uncultured_Caudovirales_phage	1.3e-31	68.4
WP_085660603.1\|1260301_1261774_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.3e-151	57.2
WP_157115475.1\|1262408_1263425_-\|transposase	IS3 family transposase	A0A2P1JR32	Mycobacterium_phage	1.1e-07	27.0
WP_085659173.1\|1263421_1263907_-\|transposase	transposase	NA	NA	NA	NA
WP_085659632.1\|1263996_1265043_+\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	6.8e-42	33.4
WP_085659633.1\|1265045_1265486_-	AAA family ATPase	NA	NA	NA	NA
WP_085659634.1\|1265568_1266531_-	hypothetical protein	A0A1S6KZY1	Salmonella_phage	1.3e-111	59.4
WP_085659635.1\|1267980_1268574_-	recombinase family protein	E5FFF9	Burkholderia_phage	1.9e-36	48.9
WP_085660604.1\|1268797_1269088_-	hypothetical protein	NA	NA	NA	NA
WP_157115472.1\|1269145_1270063_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-53	38.5
WP_085659150.1\|1270023_1270326_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1729776 : 1802058

uncultured_virus(11.76%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085659954.1\|1729776_1730439_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_085659955.1\|1730498_1731179_-	7-cyano-7-deazaguanine synthase QueC	E7DN66	Pneumococcus_phage	2.5e-29	37.4
WP_085659956.1\|1731300_1732941_-	chaperonin GroEL	A0A240F779	uncultured_virus	1.1e-179	63.7
WP_085659957.1\|1732989_1733277_-	co-chaperone GroES	A0A221S3C8	uncultured_virus	2.4e-21	58.7
WP_085659958.1\|1733507_1733795_+	hypothetical protein	NA	NA	NA	NA
WP_085659959.1\|1733807_1736660_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	6.3e-223	43.2
WP_085659960.1\|1736765_1737185_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_085659961.1\|1737319_1738192_+	alpha/beta hydrolase	A0A2K9KZN8	Tupanvirus	8.6e-06	30.3
WP_085659962.1\|1738209_1739634_-	hypothetical protein	NA	NA	NA	NA
WP_085659963.1\|1739714_1740854_-	LPS-assembly protein LptD	NA	NA	NA	NA
WP_085659964.1\|1740961_1742164_+	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_085660633.1\|1743426_1744590_-	Fic family protein	A0A1V0E025	Clostridioides_phage	2.2e-09	25.4
WP_085659965.1\|1744882_1745509_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_085659966.1\|1745550_1746744_-	quorum-sensing autoinducer synthase	NA	NA	NA	NA
WP_085659967.1\|1747026_1749552_+	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	7.5e-18	22.1
WP_085659968.1\|1749555_1750281_+	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_085660634.1\|1750423_1751584_+	sodium:proton exchanger	NA	NA	NA	NA
WP_085659969.1\|1751593_1754020_-	ribonuclease R	Q0GXV6	Lactococcus_phage	6.2e-70	34.9
WP_085659970.1\|1754370_1756575_-	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	1.8e-68	26.8
WP_085659971.1\|1756577_1758113_-	hypothetical protein	NA	NA	NA	NA
WP_157115532.1\|1758109_1758277_-	hypothetical protein	NA	NA	NA	NA
WP_085659972.1\|1758273_1758663_-	DUF4440 domain-containing protein	NA	NA	NA	NA
WP_085659973.1\|1758942_1759200_+	hypothetical protein	NA	NA	NA	NA
WP_085659974.1\|1759185_1760190_-	DUF2156 domain-containing protein	NA	NA	NA	NA
WP_085659975.1\|1760445_1761102_+	hypothetical protein	NA	NA	NA	NA
WP_157115580.1\|1761249_1762872_-	hydroxylamine reductase	NA	NA	NA	NA
WP_085659977.1\|1762889_1763294_-	hypothetical protein	NA	NA	NA	NA
WP_085659978.1\|1763315_1764041_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_085659979.1\|1764541_1765936_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_085659980.1\|1765944_1768431_+	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	3.4e-15	28.1
WP_085659981.1\|1768472_1769906_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_085660635.1\|1769976_1770642_-	response regulator transcription factor	NA	NA	NA	NA
WP_085659982.1\|1770655_1771141_-	DUF4405 domain-containing protein	NA	NA	NA	NA
WP_085659983.1\|1771183_1771567_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA
WP_085659986.1\|1772337_1773015_-	energy transducer TonB	NA	NA	NA	NA
WP_085659987.1\|1772989_1773403_-	biopolymer transporter ExbD	NA	NA	NA	NA
WP_085659988.1\|1773399_1774005_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_085659989.1\|1774362_1775757_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_157115581.1\|1775860_1777054_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_085660637.1\|1777245_1778397_+	phosphate ABC transporter substrate-binding protein	A0A1B1IWY0	uncultured_Mediterranean_phage	7.4e-90	48.1
WP_085659990.1\|1778517_1779372_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-16	30.0
WP_085660638.1\|1779373_1779814_-	arsenate reductase ArsC	A0A2H4PQT9	Staphylococcus_phage	6.6e-15	35.5
WP_085659991.1\|1781671_1782304_+	DUF4194 domain-containing protein	NA	NA	NA	NA
WP_085659992.1\|1782296_1785665_+	ATP-dependent exonuclease SbcCD, C subunit-like protein	NA	NA	NA	NA
WP_085659993.1\|1785661_1786948_+	hypothetical protein	NA	NA	NA	NA
WP_157115533.1\|1787063_1787975_+	TonB-dependent receptor plug domain-containing protein	A0A0P0I887	Acinetobacter_phage	4.9e-12	30.7
WP_085659995.1\|1787860_1789159_+	TonB-dependent receptor	NA	NA	NA	NA
WP_085659996.1\|1789128_1790007_+	DUF4198 domain-containing protein	NA	NA	NA	NA
WP_085659997.1\|1790003_1790480_+	hypothetical protein	NA	NA	NA	NA
WP_085659998.1\|1790714_1792811_-	TonB-dependent receptor	NA	NA	NA	NA
WP_085659999.1\|1792977_1793355_+	transcriptional repressor	NA	NA	NA	NA
WP_157115534.1\|1793687_1794473_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	5.0e-29	34.1
WP_085660000.1\|1794472_1796050_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_085660001.1\|1796293_1796680_-	DUF4168 domain-containing protein	NA	NA	NA	NA
WP_157115475.1\|1797052_1798069_-\|transposase	IS3 family transposase	A0A2P1JR32	Mycobacterium_phage	1.1e-07	27.0
WP_085659173.1\|1798065_1798551_-\|transposase	transposase	NA	NA	NA	NA
WP_085660002.1\|1798583_1799939_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_085660003.1\|1799935_1800616_-	response regulator transcription factor	NA	NA	NA	NA
WP_085660004.1\|1800769_1801078_+\|transposase	transposase	NA	NA	NA	NA
WP_157115535.1\|1801074_1802058_+\|transposase	IS3 family transposase	I3VR70	Rhinolophus_affinis_foamy_virus	1.3e-05	28.4

DBSCAN-SWA_4

1846148 : 1854129

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085660041.1\|1846148_1846901_-	SDR family oxidoreductase	W8CYX9	Bacillus_phage	3.9e-07	42.9
WP_085660042.1\|1846900_1847143_-	acyl carrier protein	NA	NA	NA	NA
WP_085660043.1\|1847154_1847808_-	acetyltransferase	NA	NA	NA	NA
WP_085660044.1\|1847831_1848968_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	2.3e-11	25.0
WP_085660045.1\|1848964_1850026_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.1e-90	51.9
WP_085660046.1\|1850093_1850684_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A1D7XFA9	Escherichia_phage	1.1e-36	49.4
WP_085660047.1\|1850789_1851686_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.6e-106	62.8
WP_085660048.1\|1851755_1852976_-	GDP-mannose 4,6-dehydratase	M1IBC3	Acanthocystis_turfacea_Chlorella_virus	3.4e-133	62.6
WP_085660049.1\|1853091_1854129_-	GDP-L-fucose synthase	M1I463	Paramecium_bursaria_Chlorella_virus	1.1e-87	50.1

DBSCAN-SWA_5

2322841 : 2392351

Hokovirus(33.33%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085659172.1\|2322841_2324383_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_085660410.1\|2324557_2325835_-	4-hydroxybutyrate CoA-transferase	NA	NA	NA	NA
WP_085660411.1\|2327633_2328128_-	succinate dehydrogenase	NA	NA	NA	NA
WP_085660412.1\|2328152_2328584_-	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA
WP_085660413.1\|2328720_2330013_-	cell division protein FtsZ	NA	NA	NA	NA
WP_085660414.1\|2331411_2332257_-	FtsQ-type POTRA domain-containing protein	NA	NA	NA	NA
WP_085660415.1\|2333180_2334587_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_085660416.1\|2334641_2335736_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA
WP_085660417.1\|2335732_2336932_-	cell division protein FtsW	NA	NA	NA	NA
WP_085660418.1\|2342455_2344501_-	PASTA domain-containing protein	NA	NA	NA	NA
WP_085660419.1\|2344497_2344956_-	hypothetical protein	NA	NA	NA	NA
WP_085660420.1\|2344948_2345938_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA
WP_085660421.1\|2345944_2346421_-	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA
WP_085660422.1\|2346591_2347101_+	hypothetical protein	NA	NA	NA	NA
WP_085660423.1\|2347176_2347497_+	chorismate mutase	NA	NA	NA	NA
WP_085660424.1\|2347481_2348495_+	endolytic transglycosylase MltG	NA	NA	NA	NA
WP_085660425.1\|2348592_2349786_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_085660426.1\|2349885_2350734_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_085660689.1\|2350771_2351221_+	DUF1232 domain-containing protein	NA	NA	NA	NA
WP_085660427.1\|2351229_2352666_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_085660429.1\|2357685_2358834_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_085660430.1\|2359183_2360011_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_085660431.1\|2360093_2360390_-	hypothetical protein	A3QSC6	Clostridium_virus	7.4e-10	33.3
WP_085660432.1\|2360766_2361042_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_085660433.1\|2361657_2362059_-	PIN domain-containing protein	NA	NA	NA	NA
WP_085660434.1\|2362045_2362315_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_156767507.1\|2362820_2362961_+	hypothetical protein	NA	NA	NA	NA
WP_085660436.1\|2363048_2363345_-	transcriptional regulator	NA	NA	NA	NA
WP_068867638.1\|2363325_2363691_-	hypothetical protein	NA	NA	NA	NA
WP_085660437.1\|2364178_2365279_-	linear amide C-N hydrolase	NA	NA	NA	NA
WP_157115556.1\|2365532_2365991_-	hypothetical protein	NA	NA	NA	NA
WP_085659150.1\|2366116_2366419_+\|transposase	transposase	NA	NA	NA	NA
WP_157115472.1\|2366379_2367297_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-53	38.5
WP_085660440.1\|2367471_2368137_-	hypothetical protein	NA	NA	NA	NA
WP_085660441.1\|2369083_2369308_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_085660442.1\|2369320_2371804_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.1e-110	35.0
WP_085660443.1\|2371890_2372088_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_157115557.1\|2372268_2372805_+	PAS domain-containing protein	NA	NA	NA	NA
WP_085660445.1\|2372648_2374940_+	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	4.1e-07	22.8
WP_085660446.1\|2374936_2375311_+	response regulator	NA	NA	NA	NA
WP_085660447.1\|2375307_2378268_+	response regulator	A0A1V0SGX0	Hokovirus	5.8e-70	33.3
WP_085660448.1\|2380478_2380949_-	hypothetical protein	NA	NA	NA	NA
WP_085659632.1\|2381016_2382063_-\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	6.8e-42	33.4
WP_085660449.1\|2382572_2383034_-	hypothetical protein	NA	NA	NA	NA
WP_085660450.1\|2383442_2384144_-	response regulator transcription factor	NA	NA	NA	NA
WP_085660452.1\|2384558_2385191_+	hypothetical protein	NA	NA	NA	NA
WP_085660453.1\|2385303_2388039_+	AAA family ATPase	NA	NA	NA	NA
WP_085660454.1\|2388074_2389532_-	hypothetical protein	NA	NA	NA	NA
WP_085660455.1\|2389644_2390502_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_085660456.1\|2390489_2391149_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_085660457.1\|2391475_2392351_+\|protease	protease HtpX	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP020873

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection