CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015120	Klebsiella pneumoniae strain kp757 chromosome, complete genome	0 crisprs	RT,csa3,cas3,DEDDh,DinG,WYL	0	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1312624 : 1327346

Morganella_phage(50.0%)

tail,integrase

attL 1312377:1312397|attR 1332441:1332461

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1312377:1312397	attL	NA	NA	NA	NA
WP_004213157.1\|1312624_1313878_+\|integrase	site-specific integrase	A0A1W6JPG6	Morganella_phage	3.2e-147	60.4
WP_004213158.1\|1313973_1314981_+	hypothetical protein	NA	NA	NA	NA
WP_004213159.1\|1315111_1315330_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_004213160.1\|1315329_1315764_+	hypothetical protein	A0A1W6JPH9	Morganella_phage	2.4e-25	55.3
WP_004213161.1\|1315777_1316380_+	hypothetical protein	A0A1W6JPH8	Morganella_phage	1.2e-54	57.8
WP_004213162.1\|1316379_1316559_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_023302683.1\|1316555_1317521_+	ash family protein	A0A291AWU3	Escherichia_phage	3.9e-07	44.3
WP_004213165.1\|1317517_1318021_+	hypothetical protein	NA	NA	NA	NA
WP_004213166.1\|1318017_1318227_+	hypothetical protein	NA	NA	NA	NA
WP_004213167.1\|1318223_1318850_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.6e-25	37.8
WP_004213168.1\|1318859_1319210_+	hypothetical protein	A0A1B5FPL8	Escherichia_phage	3.4e-38	70.0
WP_004213169.1\|1319202_1321965_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	2.8e-292	56.1
WP_032424539.1\|1322304_1322751_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_077252710.1\|1322764_1323115_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_004213172.1\|1323119_1323593_+	hypothetical protein	NA	NA	NA	NA
WP_004213174.1\|1323946_1324273_+	hypothetical protein	NA	NA	NA	NA
WP_004213175.1\|1324280_1327346_+\|tail	phage tail length tape-measure protein 1	B1GS57	Salmonella_phage	2.0e-94	40.5
1332441:1332461	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1444173 : 1481370

Escherichia_phage(42.11%)

lysis,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002913370.1\|1444173_1444632_-	nucleoside deaminase	A0A0B5J096	Pandoravirus	1.2e-11	32.3
WP_002913369.1\|1444764_1445673_+	transcriptional regulator CynR	A0A2P0ZL89	Lactobacillus_phage	7.8e-10	24.2
WP_023302677.1\|1445682_1446564_-	hypothetical protein	A0A2H4JEC4	uncultured_Caudovirales_phage	1.5e-05	56.8
WP_004214072.1\|1446932_1447415_-	WbuC family cupin fold metalloprotein	NA	NA	NA	NA
WP_023301637.1\|1447751_1447952_-	transcriptional regulator	K7P7V0	Enterobacteria_phage	3.7e-29	86.4
WP_085787642.1\|1447948_1448185_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	1.4e-08	58.8
WP_085787643.1\|1448181_1448886_-	hypothetical protein	A0A1W6JP46	Morganella_phage	4.2e-27	34.6
WP_032427727.1\|1448882_1449449_-	hypothetical protein	A0A077SLQ8	Escherichia_phage	1.5e-40	48.3
WP_029884650.1\|1449663_1450788_-	site-specific DNA-methyltransferase	A0A1P8DTZ3	Salmonella_phage	3.0e-88	48.1
WP_072004922.1\|1450784_1450943_-	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	2.3e-10	60.8
WP_029884651.1\|1450939_1451563_-	hypothetical protein	S0A2A9	Cellulophaga_phage	3.5e-46	49.0
WP_161267657.1\|1451559_1451868_-	hypothetical protein	A0A0F7L7F5	uncultured_marine_virus	2.9e-09	33.3
WP_076741996.1\|1452074_1452359_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	2.0e-28	59.6
WP_032717012.1\|1452447_1452642_-	hypothetical protein	NA	NA	NA	NA
WP_073970525.1\|1452634_1452760_-	hypothetical protein	NA	NA	NA	NA
WP_077267113.1\|1453281_1454034_-	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	1.3e-71	61.7
WP_004177099.1\|1454074_1454308_+	hypothetical protein	A0A0P0ZDD7	Stx2-converting_phage	4.6e-23	71.4
WP_064147795.1\|1454326_1454647_+	hypothetical protein	A0A0M4RU01	Salmonella_phage	8.5e-36	68.9
WP_004151298.1\|1454733_1454880_+	hypothetical protein	NA	NA	NA	NA
WP_085787644.1\|1454872_1455772_+	DNA replication protein	A0A0N7C1Z7	Escherichia_phage	8.4e-81	55.3
WP_161267668.1\|1455776_1457192_+	AAA family ATPase	Q9MCT4	Escherichia_phage	1.6e-182	66.7
WP_085787646.1\|1457191_1457494_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_040181701.1\|1458035_1458296_+	DUF4752 family protein	T1S9K2	Salmonella_phage	1.6e-29	75.6
WP_004141386.1\|1459064_1459277_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
WP_111474833.1\|1459882_1460128_+	DUF551 domain-containing protein	A0A088CE95	Shigella_phage	5.0e-36	83.8
WP_064161787.1\|1460696_1461431_+	hypothetical protein	NA	NA	NA	NA
WP_064161788.1\|1462123_1462579_+	hypothetical protein	K7P7B8	Enterobacteria_phage	2.3e-55	68.9
WP_085787648.1\|1462578_1462749_+	NinE family protein	G8C7V4	Escherichia_phage	9.7e-15	71.4
WP_085787649.1\|1462741_1463380_+	hypothetical protein	H6WRY9	Salmonella_phage	2.4e-74	68.9
WP_032427735.1\|1463376_1463517_+	YlcG family protein	NA	NA	NA	NA
WP_050485953.1\|1463699_1464155_+	hypothetical protein	Q8HA89	Salmonella_phage	3.6e-24	39.4
WP_085787650.1\|1464669_1464984_+	hypothetical protein	H6WRZ3	Salmonella_phage	2.4e-43	85.1
WP_085787651.1\|1464986_1465490_+	lysozyme	K7P7Q3	Enterobacteria_phage	1.5e-74	79.6
WP_077268745.1\|1465486_1465951_+\|lysis	lysis protein	M9NYX9	Enterobacteria_phage	7.0e-39	56.5
WP_001064347.1\|1466142_1466661_+	Rha family transcriptional regulator	Q38450	Enterobacteria_phage	2.9e-94	100.0
WP_085787652.1\|1466720_1467461_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	6.1e-13	66.0
WP_064161794.1\|1467464_1468796_+\|terminase	terminase	A0A0U2JTW9	Escherichia_phage	2.1e-152	59.7
WP_065892269.1\|1468807_1470223_+	DUF1073 domain-containing protein	A0A0U2S5X9	Escherichia_phage	2.0e-89	37.0
WP_053274344.1\|1470219_1471050_+	hypothetical protein	A0A0U2I1R8	Escherichia_phage	6.2e-54	42.2
WP_065892271.1\|1471062_1472676_+	NUDIX hydrolase	NA	NA	NA	NA
WP_065892275.1\|1472691_1473552_+	hypothetical protein	NA	NA	NA	NA
WP_042632526.1\|1473565_1474597_+	hypothetical protein	A0A0U2QQI2	Escherichia_phage	8.7e-74	46.1
WP_017898838.1\|1474668_1475151_+	hypothetical protein	NA	NA	NA	NA
WP_004884210.1\|1475147_1475576_+	hypothetical protein	A0A0U2S646	Escherichia_phage	3.8e-23	39.3
WP_085787653.1\|1475572_1476007_+	hypothetical protein	NA	NA	NA	NA
WP_064161800.1\|1475990_1476929_+	hypothetical protein	A0A0U2SH76	Escherichia_phage	6.5e-52	37.9
WP_064161801.1\|1476933_1478328_+	hypothetical protein	A0A0U2KD19	Escherichia_phage	5.1e-69	35.7
WP_064161802.1\|1478331_1478769_+	hypothetical protein	A0A0U2S616	Escherichia_phage	7.0e-25	38.2
WP_064161803.1\|1478772_1479345_+	hypothetical protein	NA	NA	NA	NA
WP_097403955.1\|1479402_1481370_+	lytic transglycosylase domain-containing protein	I6ZXX9	Escherichia_phage	2.1e-15	40.4

DBSCAN-SWA_3

1714949 : 1721854

Planktothrix_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004180551.1\|1714949_1715813_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_004214747.1\|1715823_1716597_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.1e-26	36.7
WP_004151134.1\|1716837_1717734_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004144192.1\|1717976_1719338_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004201558.1\|1719656_1720379_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_004214740.1\|1720375_1721854_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.4e-29	28.3

DBSCAN-SWA_4

2688795 : 2698197

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_161267581.1\|2688795_2690430_+	DUF4981 domain-containing protein	L0N6M2	Herpes_simplex_virus	4.4e-181	55.5
WP_004176258.1\|2690484_2691750_+	MFS transporter	NA	NA	NA	NA
WP_004209813.1\|2691780_2692869_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	1.0e-210	99.7
WP_004176262.1\|2692955_2693216_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_001620095.1\|2693513_2694374_+	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
WP_004209817.1\|2694394_2695156_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	5.5e-134	99.6
WP_085787672.1\|2695416_2696307_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-155	98.3
WP_004183946.1\|2696318_2697584_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.3
WP_002210516.1\|2697576_2698197_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_5

2733405 : 2815184

Escherichia_phage(19.57%)

protease,holin,capsid,head,integrase,portal,terminase,tail

attL 2751583:2751601|attR 2802034:2802052

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004209779.1\|2733405_2734218_+\|protease	serine protease	NA	NA	NA	NA
WP_002903685.1\|2734231_2734348_+	hypothetical protein	NA	NA	NA	NA
WP_002903683.1\|2734391_2734721_-	multidrug efflux SMR transporter subunit KpnF	NA	NA	NA	NA
WP_002903681.1\|2734707_2735070_-	multidrug efflux SMR transporter subunit KpnE	NA	NA	NA	NA
WP_002903679.1\|2735512_2736547_+	AI-2E family transporter	NA	NA	NA	NA
WP_002903677.1\|2736771_2738427_+	malonate decarboxylase subunit alpha	NA	NA	NA	NA
WP_004143107.1\|2738426_2739269_+	triphosphoribosyl-dephospho-CoA synthase	NA	NA	NA	NA
WP_002903639.1\|2739286_2739586_+	malonate decarboxylase acyl carrier protein	NA	NA	NA	NA
WP_004143105.1\|2739578_2740412_+	biotin-independent malonate decarboxylase subunit beta	NA	NA	NA	NA
WP_004209782.1\|2740411_2741212_+	biotin-independent malonate decarboxylase subunit gamma	NA	NA	NA	NA
WP_004209783.1\|2741348_2742308_+	AEC family transporter	A0A0U2C0Y4	Salmonella_phage	2.7e-53	90.3
WP_004209784.1\|2742311_2742929_+	malonate decarboxylase holo-ACP synthase	NA	NA	NA	NA
WP_004209787.1\|2742928_2743831_+	malonate decarboxylase subunit epsilon	NA	NA	NA	NA
WP_004148289.1\|2743820_2744747_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_022615525.1\|2744904_2746560_-	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_004209791.1\|2746824_2747745_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_004179716.1\|2747908_2748265_-	hypothetical protein	NA	NA	NA	NA
WP_004183910.1\|2748420_2750037_+	two-component system sensor histidine kinase DcuS	NA	NA	NA	NA
WP_004176303.1\|2750033_2750753_+	two-component system response regulator DcuR	NA	NA	NA	NA
WP_004209794.1\|2750733_2751684_-	FAD:protein FMN transferase	NA	NA	NA	NA
2751583:2751601	attL	NA	NA	NA	NA
WP_004209796.1\|2751751_2754529_-	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	6.8e-65	31.0
WP_002903581.1\|2755246_2756683_+	anion permease	NA	NA	NA	NA
WP_004152246.1\|2756737_2758390_+	class I fumarate hydratase	NA	NA	NA	NA
WP_023302609.1\|2758552_2760169_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_004143067.1\|2761213_2761603_-	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
WP_004215412.1\|2761595_2762360_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
WP_020316475.1\|2762349_2763702_-	3-carboxy-cis,cis-muconate cycloisomerase	NA	NA	NA	NA
WP_004214878.1\|2763711_2764914_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_004176317.1\|2764924_2765581_-	CoA transferase subunit B	NA	NA	NA	NA
WP_002903522.1\|2765591_2766278_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA
WP_004151560.1\|2766447_2767254_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004143055.1\|2767250_2767814_-	DNA endonuclease SmrA	NA	NA	NA	NA
WP_004148273.1\|2767915_2768824_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004214881.1\|2768990_2770301_+	M20 family metallo-hydrolase	NA	NA	NA	NA
WP_004176321.1\|2770300_2771746_+	amidohydrolase	NA	NA	NA	NA
WP_022615523.1\|2771865_2772984_+	transporter	NA	NA	NA	NA
WP_004214887.1\|2773112_2774213_+\|integrase	site-specific integrase	A0A1W6JP34	Morganella_phage	8.3e-115	56.8
WP_004214894.1\|2775413_2775713_-	hypothetical protein	NA	NA	NA	NA
WP_022615522.1\|2775880_2776525_+	hypothetical protein	NA	NA	NA	NA
WP_022615521.1\|2776580_2777315_-	hypothetical protein	NA	NA	NA	NA
WP_022615520.1\|2777327_2779481_-	hypothetical protein	B5TAB2	Burkholderia_phage	6.2e-90	42.2
WP_016530179.1\|2779553_2782631_-	hypothetical protein	A0A286S259	Klebsiella_phage	0.0e+00	61.5
WP_022615519.1\|2782627_2783008_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	1.6e-57	80.2
WP_004864228.1\|2783020_2783497_-	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	4.8e-51	65.8
WP_004177132.1\|2783483_2783957_-	hypothetical protein	A0A286S298	Klebsiella_phage	1.4e-55	62.1
WP_016530181.1\|2783977_2787367_-\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	60.6
WP_016530182.1\|2787427_2787661_-	hypothetical protein	K7PH16	Enterobacteria_phage	1.9e-08	47.2
WP_016530183.1\|2787734_2788040_-	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	4.7e-28	64.6
WP_016530184.1\|2788042_2788447_-\|tail	phage tail assembly chaperone	K7PKV6	Enterobacterial_phage	3.2e-32	57.4
WP_016530185.1\|2788477_2789182_-	immunoglobulin domain-containing protein	K7PHL2	Enterobacterial_phage	6.6e-81	67.4
WP_016530186.1\|2789238_2789586_-	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	2.8e-32	63.7
WP_016530187.1\|2789582_2790032_-	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	7.4e-62	81.9
WP_016530188.1\|2790028_2790367_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	7.8e-40	70.5
WP_016530189.1\|2790375_2790693_-\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	1.8e-22	51.0
WP_004104235.1\|2790770_2792009_-\|capsid	phage major capsid protein	Q8SBH8	Shigella_phage	6.8e-158	69.2
WP_000999827.1\|2792018_2792618_-\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.0e-90	82.5
WP_016530190.1\|2792610_2793837_-\|portal	phage portal protein	Q8SBI0	Shigella_phage	3.2e-208	85.3
WP_025108055.1\|2793984_2795736_-\|terminase	terminase large subunit	A0A1P8DTK0	Proteus_phage	4.0e-252	72.5
WP_016530193.1\|2795739_2796237_-\|terminase	phage terminase small subunit P27 family	A0A1W6JP17	Morganella_phage	5.7e-63	73.9
WP_016530194.1\|2796394_2796745_-	HNH endonuclease	A0A1B5FP94	Escherichia_phage	7.8e-51	79.8
WP_016530196.1\|2797378_2798005_-	hypothetical protein	NA	NA	NA	NA
WP_049016906.1\|2798009_2798945_-	DUF4747 family protein	NA	NA	NA	NA
WP_016530199.1\|2799168_2799444_-	hypothetical protein	G8C7W1	Escherichia_phage	1.7e-05	36.0
WP_016530200.1\|2799451_2800081_-	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	1.4e-103	88.0
WP_016530201.1\|2800080_2800362_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	1.6e-30	71.0
WP_004213330.1\|2800348_2800744_-	membrane protein	G8C7V8	Escherichia_phage	1.5e-45	73.1
WP_032427780.1\|2800836_2801409_-	hypothetical protein	NA	NA	NA	NA
WP_004213332.1\|2801520_2802099_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	3.5e-48	56.1
2802034:2802052	attR	NA	NA	NA	NA
WP_004213334.1\|2802112_2803093_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	7.1e-134	66.6
WP_004184734.1\|2803105_2803483_-	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	5.1e-48	73.6
WP_016530204.1\|2803492_2804302_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	4.5e-110	68.9
WP_016530205.1\|2804298_2805237_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	2.6e-101	74.5
WP_004184738.1\|2805226_2805406_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.6e-15	75.0
WP_004213338.1\|2805643_2806105_-	hypothetical protein	K7PJS5	Enterobacterial_phage	1.7e-69	88.2
WP_016530206.1\|2806130_2806328_-	hypothetical protein	H9C161	Pectobacterium_phage	2.7e-16	66.1
WP_032408726.1\|2806432_2807080_+	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	9.3e-74	63.0
WP_004213349.1\|2807847_2808147_+	hypothetical protein	K7PJS4	Enterobacterial_phage	9.4e-13	46.7
WP_085787674.1\|2808250_2808391_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	6.3e-12	77.5
WP_004213338.1\|2808628_2809090_-	hypothetical protein	K7PJS5	Enterobacterial_phage	1.7e-69	88.2
WP_016530206.1\|2809115_2809313_-	hypothetical protein	H9C161	Pectobacterium_phage	2.7e-16	66.1
WP_032408726.1\|2809417_2810065_+	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	9.3e-74	63.0
WP_004213349.1\|2810832_2811132_+	hypothetical protein	K7PJS4	Enterobacterial_phage	9.4e-13	46.7
WP_004213351.1\|2811131_2811917_+	hypothetical protein	C7BGF1	Burkholderia_phage	5.3e-63	52.9
WP_004213355.1\|2812044_2812389_+	hypothetical protein	NA	NA	NA	NA
WP_016530208.1\|2812381_2813044_+	hypothetical protein	Q71T76	Escherichia_phage	2.2e-54	56.0
WP_004213359.1\|2813040_2813226_+	hypothetical protein	NA	NA	NA	NA
WP_016530209.1\|2813345_2813606_+	hypothetical protein	A0A1L5C290	Pseudoalteromonas_phage	1.5e-11	43.7
WP_002903398.1\|2814217_2814376_-	hypothetical protein	NA	NA	NA	NA
WP_004213367.1\|2814668_2815184_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	2.0e-23	54.9

DBSCAN-SWA_6

3407114 : 3416578

Brazilian_cedratvirus(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004209699.1\|3407114_3408836_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_004141853.1\|3408862_3409582_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3409935_3410154_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|3410274_3412554_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|3412584_3412902_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3413227_3413449_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_004209695.1\|3413525_3415466_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896440.1\|3415462_3416578_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_7

3894336 : 3939559

Salmonella_phage(30.77%)

tRNA,holin,integrase,terminase

attL 3896205:3896221|attR 3947409:3947425

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085787696.1\|3894336_3896499_-	hypothetical protein	B5TAB2	Burkholderia_phage	1.1e-89	42.2
3896205:3896221	attL	NA	NA	NA	NA
WP_072271767.1\|3896566_3896752_-	hypothetical protein	NA	NA	NA	NA
WP_074188355.1\|3896751_3897657_-	hypothetical protein	A0A1I9SEW2	Klebsiella_phage	1.3e-49	59.4
WP_040217254.1\|3897656_3898433_-	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	4.7e-80	57.3
WP_039108741.1\|3898429_3899629_-	bacteriophage protein	A0A0M4RD32	Salmonella_phage	1.1e-157	72.9
WP_004152573.1\|3899628_3899982_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_085787697.1\|3899983_3900637_-	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
WP_085787698.1\|3900678_3901095_-	toxin YafO, type II toxin-antitoxin system family protein	NA	NA	NA	NA
WP_085787699.1\|3901096_3901669_-	hypothetical protein	NA	NA	NA	NA
WP_085787700.1\|3901872_3902217_-	hypothetical protein	NA	NA	NA	NA
WP_064162788.1\|3902213_3903242_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	3.0e-98	53.8
WP_074421621.1\|3903244_3903472_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.1e-20	56.0
WP_004225238.1\|3903547_3903961_-	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	8.1e-31	55.9
WP_085787701.1\|3904146_3906072_-	hypothetical protein	A0A0M4REK7	Salmonella_phage	8.1e-182	71.3
WP_016244729.1\|3906061_3906214_-	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	1.4e-17	84.0
WP_085787702.1\|3906255_3906705_-	hypothetical protein	A0A0M4S6U8	Salmonella_phage	3.1e-36	54.6
WP_025269949.1\|3906708_3907149_-	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	2.1e-61	79.5
WP_025269950.1\|3907159_3908311_-	DUF3383 family protein	A0A0M4RD26	Salmonella_phage	2.1e-177	81.5
WP_071057245.1\|3908312_3908864_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.2e-40	44.9
WP_009652660.1\|3908856_3909261_-	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-43	71.5
WP_025269952.1\|3909260_3909767_-	hypothetical protein	NA	NA	NA	NA
WP_064161941.1\|3909763_3910183_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	4.8e-39	60.0
WP_040217287.1\|3910151_3910433_-	hypothetical protein	NA	NA	NA	NA
WP_064161940.1\|3910472_3911414_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	7.8e-138	77.4
WP_000528476.1\|3911425_3911920_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
WP_064161939.1\|3911923_3913126_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	7.0e-107	54.1
WP_064161951.1\|3913177_3913726_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	2.3e-49	56.9
WP_064161938.1\|3913781_3915233_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.2e-191	68.6
WP_021312714.1\|3915470_3916871_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.2
WP_074422973.1\|3916821_3917310_-	hypothetical protein	NA	NA	NA	NA
WP_045354782.1\|3917855_3918305_-	lysozyme	A0A0M4R365	Salmonella_phage	1.2e-59	71.8
WP_025987688.1\|3918291_3918597_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	8.6e-46	97.9
WP_085787703.1\|3919070_3919277_+	hypothetical protein	NA	NA	NA	NA
WP_085787704.1\|3919278_3919650_+	hypothetical protein	NA	NA	NA	NA
WP_085787743.1\|3920086_3920770_-	antiterminator	I6PDF8	Cronobacter_phage	2.5e-53	49.8
WP_085787705.1\|3920769_3920910_-	YlcG family protein	NA	NA	NA	NA
WP_017898851.1\|3920906_3921131_-	hypothetical protein	Q76H69	Enterobacteria_phage	2.0e-23	63.0
WP_085787706.1\|3921127_3921709_-	protein NinG	E7C9S3	Salmonella_phage	6.0e-40	45.3
WP_085787707.1\|3921701_3921872_-	hypothetical protein	G8C7V4	Escherichia_phage	3.3e-15	73.2
WP_085787708.1\|3921852_3922320_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	5.7e-33	45.8
WP_085787709.1\|3922521_3922779_-	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	2.4e-25	71.4
WP_085787710.1\|3922824_3923055_-	hypothetical protein	NA	NA	NA	NA
WP_085787711.1\|3923139_3923493_-	hypothetical protein	NA	NA	NA	NA
WP_023339691.1\|3923901_3924090_-	hypothetical protein	A0A192Y8X2	Salmonella_phage	3.7e-23	88.7
WP_032427730.1\|3924613_3924802_-	hypothetical protein	NA	NA	NA	NA
WP_102804842.1\|3924798_3925284_-	Eae protein	Q858D1	Salmonella_phage	1.2e-33	53.4
WP_012542626.1\|3925280_3925574_-	protein ren	O48423	Enterobacteria_phage	2.5e-26	65.6
WP_032427729.1\|3925570_3926440_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	3.4e-95	69.7
WP_004178813.1\|3927363_3927585_-	hypothetical protein	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
WP_001548452.1\|3927664_3927856_-	hypothetical protein	A0A2R2Z333	Escherichia_phage	2.4e-09	55.4
WP_032419325.1\|3927960_3928671_+	helix-turn-helix domain-containing protein	K7P8B2	Enterobacteria_phage	3.7e-92	70.6
WP_032426564.1\|3929073_3930147_+	AAA family ATPase	E7C9Q8	Salmonella_phage	3.8e-181	86.8
WP_032427826.1\|3930185_3930389_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	7.0e-20	73.1
WP_004219883.1\|3930698_3930824_+	hypothetical protein	NA	NA	NA	NA
WP_008807814.1\|3930816_3931023_+	phage encoded cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	1.4e-31	94.1
WP_016529276.1\|3931103_3931388_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	8.6e-40	79.8
WP_014342891.1\|3931797_3932133_+	hypothetical protein	A0A0F7L7F5	uncultured_marine_virus	1.3e-10	34.3
WP_049016883.1\|3932129_3932753_+	YqaJ-like viral recombinase domain protein	S0A2A9	Cellulophaga_phage	3.5e-46	48.6
WP_023283323.1\|3932749_3932908_+	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	3.0e-10	60.8
WP_074384827.1\|3932904_3933432_+	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	2.4e-56	61.0
WP_074384826.1\|3933645_3934323_+	hypothetical protein	Q71T76	Escherichia_phage	2.0e-58	55.8
WP_074384825.1\|3934319_3935024_+	hypothetical protein	A0A1W6JP46	Morganella_phage	7.1e-27	34.6
WP_074384824.1\|3935020_3935239_+	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	1.1e-10	49.3
WP_004223135.1\|3935240_3935576_+	excisionase family DNA-binding protein	NA	NA	NA	NA
WP_004191604.1\|3935452_3936616_+\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	5.0e-203	87.1
WP_004143017.1\|3937047_3937914_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
WP_004143016.1\|3937915_3938128_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004143010.1\|3938173_3939559_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4
3947409:3947425	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage