CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019343	Oceanicoccus sagamiensis strain NBRC 107125 chromosome, complete genome	7 crisprs	csa3,Cas9_archaeal,cas3,DEDDh,DinG	3	1	2	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019343_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019343_1

350361-350432

Orphan

Consensus_repeat	Method
GGTGGATTATAATCCACCCTACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019343_1

>merge|NZ_CP019343|1|350361-350432|CRISPRCasFinder
GGTGGATTATAATCCACCCTACTTACAAGTATGTTTACAGGCGTGTTTTGGTGGATTTTAATCCACCCTACT

>NZ_CP019343|1|1|350361-350432|CRISPRCasFinder
GGTGGATTATAATCCACCCTACT	TACAAGTATGTTTACAGGCGTGTTTT
GGTGGATTTTAATCCACCCTACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019343.1\|WP_085756990.1\|340880_341846_-\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	unknown	unknown	gnl\|CDD\|226985
NZ_CP019343.1\|WP_085756989.1\|339602_340304_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP019343.1\|WP_085757004.1\|357106_357754_-\|DUF4114-domain-containing-protein	unknown	unknown	gnl\|CDD\|377877
NZ_CP019343.1\|WP_085757005.1\|357947_358811_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP019343.1\|WP_085756994.1\|346540_347503_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|223681
NZ_CP019343.1\|WP_085756995.1\|347653_347941_-\|ComEA-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|224472
NZ_CP019343.1\|WP_085757002.1\|354938_355826_-\|prephenate-dehydrogenase/arogenate-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|237820
NZ_CP019343.1\|WP_085757001.1\|353502_354792_-\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|237003
NZ_CP019343.1\|WP_085757007.1\|360190_363079_+\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP019343.1\|WP_085757000.1\|350972_352649_-\|30S-ribosomal-protein-S1	unknown	unknown	gnl\|CDD\|235775
NZ_CP019343.1\|WP_085756999.1\|350532_350826_-\|integration-host-factor-subunit-beta	unknown	unknown	gnl\|CDD\|178925
NZ_CP019343.1\|WP_085756993.1\|344722_346501_-\|SLC13-family-permease	unknown	unknown	gnl\|CDD\|238535
NZ_CP019343.1\|WP_085760451.1\|352814_353501_-\|(d)CMP-kinase	unknown	unknown	gnl\|CDD\|234579
NZ_CP019343.1\|WP_085756997.1\|348789_349983_-\|lipopolysaccharide-assembly-protein-LapB	unknown	unknown	gnl\|CDD\|236983
NZ_CP019343.1\|WP_085756998.1\|349985_350321_-\|LapA-family-protein	unknown	unknown	gnl\|CDD\|377648
NZ_CP019343.1\|WP_085756996.1\|348049_348745_-\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234695
NZ_CP019343.1\|WP_085756991.1\|341868_343893_-\|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl\|CDD\|235395
NZ_CP019343.1\|WP_085757006.1\|358958_360086_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|237435
NZ_CP019343.1\|WP_085756992.1\|344285_344468_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085757003.1\|355853_356957_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235064

Protein	Function_ID	Function_description	E-value
NZ_CP019343.1\|WP_085756990.1\|340880_341846_-\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	gnl\|CDD\|226985	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only].	6.13366e-40
NZ_CP019343.1\|WP_085756989.1\|339602_340304_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	1.56857e-140
NZ_CP019343.1\|WP_085757004.1\|357106_357754_-\|DUF4114-domain-containing-protein	gnl\|CDD\|377877	pfam07589, VPEP, PEP-CTERM motif. This motif has been identified in a wide range of bacteria at their C-terminus. It has been suggested that this is a protein sorting signal. Based on phylogenetic profiling it has been suggested that the EpsH family of proteins mediate this function.	2.61941e-05
NZ_CP019343.1\|WP_085757005.1\|357947_358811_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	5.00789e-45
NZ_CP019343.1\|WP_085756994.1\|346540_347503_-\|acetyltransferase	gnl\|CDD\|223681	COG0608, RecJ, Single-stranded DNA-specific exonuclease [DNA replication, recombination, and repair].	0.00400202
NZ_CP019343.1\|WP_085756995.1\|347653_347941_-\|ComEA-family-DNA-binding-protein	gnl\|CDD\|224472	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair].	1.04251e-22
NZ_CP019343.1\|WP_085757002.1\|354938_355826_-\|prephenate-dehydrogenase/arogenate-dehydrogenase-family-protein	gnl\|CDD\|237820	PRK14806, PRK14806, bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	1.02601e-139
NZ_CP019343.1\|WP_085757001.1\|353502_354792_-\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|237003	PRK11860, PRK11860, bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase.	0
NZ_CP019343.1\|WP_085757007.1\|360190_363079_+\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP019343.1\|WP_085757000.1\|350972_352649_-\|30S-ribosomal-protein-S1	gnl\|CDD\|235775	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed.	0
NZ_CP019343.1\|WP_085756999.1\|350532_350826_-\|integration-host-factor-subunit-beta	gnl\|CDD\|178925	PRK00199, ihfB, integration host factor subunit beta; Reviewed.	3.12752e-61
NZ_CP019343.1\|WP_085756993.1\|344722_346501_-\|SLC13-family-permease	gnl\|CDD\|238535	cd01115, SLC13_permease, Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.	4.1803e-41
NZ_CP019343.1\|WP_085760451.1\|352814_353501_-\|(d)CMP-kinase	gnl\|CDD\|234579	PRK00023, cmk, (d)CMP kinase.	4.4356e-117
NZ_CP019343.1\|WP_085756997.1\|348789_349983_-\|lipopolysaccharide-assembly-protein-LapB	gnl\|CDD\|236983	PRK11788, PRK11788, tetratricopeptide repeat protein; Provisional.	2.6025e-161
NZ_CP019343.1\|WP_085756998.1\|349985_350321_-\|LapA-family-protein	gnl\|CDD\|377648	pfam06305, LapA_dom, Lipopolysaccharide assembly protein A domain. This family includes a domain found in lipopolysaccharide assembly protein A (LapA). LapA functions along with LapB in the assembly of lipopolysaccharide (LPS). Domains in this family are also found in some uncharacterized bacterial proteins.	2.49785e-07
NZ_CP019343.1\|WP_085756996.1\|348049_348745_-\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234695	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase.	3.97253e-137
NZ_CP019343.1\|WP_085756991.1\|341868_343893_-\|excinuclease-ABC-subunit-UvrB	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP019343.1\|WP_085757006.1\|358958_360086_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|237435	PRK13579, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP019343.1\|WP_085757003.1\|355853_356957_-\|histidinol-phosphate-transaminase	gnl\|CDD\|235064	PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated.	0

>NZ_CP019343.1|WP_085756998.1|349985_350321_-|LapA-family-protein
MRSLQRLLVGCLLIVVLAFGVLFSIQNTDKAALDLLIVQLPEQRVSLWVLLAFAVGGIAGLLVSSAAIIRLKSQGLLLQRKLDKREKELAKLRTSDFRTPVTVKPNKGSKS
>NZ_CP019343.1|WP_085756997.1|348789_349983_-|lipopolysaccharide-assembly-protein-LapB
MADIWQLLLVFTAIAIGWWLGRRGRLVSADEGALHHQYYKGLNFLINDQPDGALDAFIEALEVNSETLETHIAVGNLMRRKGEVERAIRIHQNLLARPSLPRVHLHQAHLELARDFISAGLLDRAERLLHDLIKEAPELKETAMRHLLEIYKDEKEWQQAIDVAEQLLPKRSLLKAAAPVDKTITAALSHYCCELAELSLVKNDYHSARAQLKKALSHDRNCVRASLLIADIEFRTGHYAKAIKSLRKVRDQDPVFIPETIELLRSSFEHLGDDEGFYRYMMESLDIYPSASVLLHLVDDITAKKGVVAAAGFLGQELKKRPSLRGLAKLVEFHIANSSGQSKESLGILQLLIEQLMQSKPQYQCHHCGFSGKRLHWMCPGCKQWGQVKAIRGAEGD
>NZ_CP019343.1|WP_085756996.1|348049_348745_-|orotidine-5'-phosphate-decarboxylase
MTTTSPVIVAMDYSDLASVEALADQLDPSQCRLKVGKELFTHCGPQVVRSIQDRGFDVFLDLKFHDIPNTVAGAVKAAADLGVWMVNVHASGGARMMEAAKEALVNYSSAPSLIAVTVLTSMEQQDLQGIGLDCQPIDQVVRLARLTKECGLDGVVCSAQETDILRKEIGSDFQLVTPGIRPANAEQGDQRRVATPSSAMASGSSYLVIGRPITQHADPLAALAAINQELH
>NZ_CP019343.1|WP_085756995.1|347653_347941_-|ComEA-family-DNA-binding-protein
MRIFRTIFLSLSLALSGLVLPSLAFSAEPNLPVNINTADAETLSAALKGVGTRKAEAIIAYRESYGPFKALEELTAVKGIGESLLNKNRDSITLE
>NZ_CP019343.1|WP_085756994.1|346540_347503_-|acetyltransferase
MANIDLFNGDADGICALTQLRNAEPLESTLVTGVKRDIQLMDKIEAKAGDKITVLDISLDKNREGLHQALEAGAEVFYVDHHFAGDIPESDKLTAIINPAADVCTSILVNHHLNGQFVEWAITGAFGDNLKNSANVLAKPLNLSEQQLSSLENLGIYINYNGYGSNLDDLHFTPEELYRKVSVHASPFDFINDSRESFEKLENGYNSDMASAASLKPEFANDAVAAYILPNEAWARRVSGVYSNDLANGTPSRAHAVLTVKANGNYLISVRAPLDNKTGADELCRSFATGGGRAAAAGVNDLPADELQTFIDRFNQFYAD
>NZ_CP019343.1|WP_085756993.1|344722_346501_-|SLC13-family-permease
MALTPEAFQTLAVIAFCFGLLVFSRYPADAILVAGVALLTLLNIITAEEALVGMSNEGMATVAVLFVVARGLAQTGVVGWVSNSLLGRPKNTAAAQLRLMLPVSAMSTVLNNTPVVAMMVPAVADWAKRNNLNVSQLMMPLSYAAIVGGTCTLVGSSTNLVINGMLTAHSGDTGLRMFDLAWVGVPCVIVVTAFTIAFSRWLLPHRGEKDQQLFGDAREYIVEMEIESDSPLVGKSIEEAGLRQLPGMFLVEIDRDGRLITAVAPNEMLLAGDHLIFAGDVRSVVDLKNIHGLKVAEKQVFKLNSGAHTRCLVEVVISRNFPQLGKSIKDMRFRNLYSAAIIAVARDGERIKTKIGDIYLKPGDTLLLETHDRFVNQQRYSKNFLLVSEIENSRPVRHEQRNLAAAIMLAMVISVAVGFLSMFKAALLAAGLMILTRCIKVQDARESVNWQVILVIAASIGLGGALEKTGAATVIAETMIGLTAHSPVGVLITLFVLTAAFSAVVSNLAAAVLIFPIAIAASQQLDVNLLPFAVTVMIAASACFATPIGYQTNLMVYGPGNYRFGDFMKIGLPLTVMVGITTVLVVPMVWSF
>NZ_CP019343.1|WP_085756992.1|344285_344468_-|hypothetical-protein
MMNIKQVMIAMVAALLAVSVSASEPAPSVDADANKHKCYMEDQRNSEFCQRVMFPPVPFR
>NZ_CP019343.1|WP_085756991.1|341868_343893_-|excinuclease-ABC-subunit-UvrB
MSKPFEVVSKFEPAGDQPTAIAGLLEGVKAGLRSQTLLGVTGSGKTFTIANVVEGIQRPTIVMAPNKTLAAQLYGEFKEFFPKNAVEYFVSYYDYYQPEAYVPSSDTFIDKDASVNEHIEQMRLSATKALMEREDTIVVATVSAIYGLGDPSQYLKMMMHLDRGDQVDQRYILRRLAELQYTRNDIDFARGTYRVRGDVIDIFPADAEKEAVRVELFDEEIDNLSTFDPLTGEVFRRLPRVSIYPKSHYVTSRETLLGALDEIEEELRGRLKQLRDNNKLVEAQRLEQRTRYDLEMIRELGYCNGIENYSRYLSGRDSGDAPPTLFDYLPDNALVVIDESHVGVPQLGAMYKGDRSRKETLVEYGFRLPSALDNRPMRFEEWERIVPQLIFVSATPGKYEQEHADRVVEQVVRPTGLIDPEIEVRPATTQVDDLLSEIHIRVKKEERVLVTTLTKRMSEDLTEYLDEHGVKVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSDRSLIQTIGRAARNLNGKAILYADKITGSMERAMGETERRREKQLAHNKEHNIVPIGVKKDIADIMEGARAPGTRFARNAKGKLVAEAPADYQVEAAAMTPKQLSQEIKRLEQKMFEHAKNLEFEEAANTRDKISGLKAQAFVS
>NZ_CP019343.1|WP_085756990.1|340880_341846_-|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha
MSASPTAKQQPLLAGHWYVIASPHQLRSKPLALERFGERLVLWRQQSGQIVAMPDQCVHRGAQLSGGHIDNDTIVCPFHGFAYDASGQCTVMPCEESWQIPSGFKLQTYTVCEAGDWIWLWRGPETGSLPPPPVEPLLEGLVYGELCDDWNAHYTRAIEVQIDYAHLPFVHKKSIGRFMQGNSFDVGTDLSSGTIKSWLNNHKKGSQQWAAIHYPNTWINSVGGKFYIQAVFIPVAQQRCHVIMRFHHPVKIPLIRQLVSWFGTQLGRKVIKEDRPVVQGQFPANSDDANEKLTPADAGIVGYRKLRRSHQAQLKAEIKPQ
>NZ_CP019343.1|WP_085756989.1|339602_340304_-|aquaporin-Z
MTLTKKLGAEFIGTFWLVLGGCGSAVLAAAFPDVGIGLLGVSLAFGLTVLTMAFAIGHISGCHLNPAVSIGLWSGGRFSAAELGPYIVAQVAGGLAGAAILFVIASGQAGFDASAGFASNGFGEHSPGGYSMTAALVTEIVMTFMFLIIILGATDSRAPAGLAPVAIGLGLTLIHLISIPVTNTSVNPARSTGVAIFQGDWAVSQLWLFWVAPIIGAILAGIVYRWLGAEEDA
>NZ_CP019343.1|WP_085756999.1|350532_350826_-|integration-host-factor-subunit-beta
MTKSELIERIASRQTQLSLKDVELAVKTVIEQMSQTLATGERIEIRGFGSFSLHYREPRQGRNPKTGETVELSGKYVPHFKPGKEMRERVNESLQRG
>NZ_CP019343.1|WP_085757000.1|350972_352649_-|30S-ribosomal-protein-S1
MESFADLFEESLNTIDMKPGSIVTGVVIDIDSDWVTVHAGLKSEGVIPRSEFVSESGELSLEVGDEVQVALEAVEDGWGATKLSREKAKRAEAWKVLEAAYAGEESVIGVINGKVKGGFTVDVNSIRAFLPGSLVDVRPVRETTHLEGKELEFKVIKLDQKRNNVVVSRRAVMEDANSAERDELLATLQEGQSVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVGDEIDVKVLKFDRERNRVSLGLKQLGEDPWVSITGRYPEGARVQATITNLTDYGCFAEIEEGVEGLVHVSEMDWTNKNIHPSKVVNLGDEVEVMILDIDEERRRISLGIKQCMENPWDAFGRQFNKGDKISGAIKSITDFGIFIGLDGAIDGLVHLSDISWNETGEEAVRKYKKGDEIETVILSVDPERERISLGIKQLEDDPFNDYVTENDKNSIVKGVIKEVDAKAAIVTLSGDIEGTLKASEISRDKVEDARNALKEGEEVEVKIITVDRKNRTIALSIKAKDMADEKEAIKAHKESEAEAAAPATIGDLIKAQMDGKE
>NZ_CP019343.1|WP_085760451.1|352814_353501_-|(d)CMP-kinase
MNTVPVVTIDGPSGSGKGTICQLLAKELGWHLLDSGALYRIVGLAAERKGVPFDDDAALADLAANLDVEFRPGEPGEPSAVLLDGEDISNEVRSETTGTLASYVAVHNPVRDALKGLQRGFAKSPGLVADGRDMGTVIFTDAPVKIYLIASAEERAERRYKQLKAKGESVNLAALLKDIQLRDERDMNRPVAPLKPADDAIVIDSTGTAIEDVFKQVLDKVKSTILTV
>NZ_CP019343.1|WP_085757001.1|353502_354792_-|3-phosphoshikimate-1-carboxyvinyltransferase
MSSLEQLVLQPIAGVNGEVIIPGSKSLSNRALLLAALAEGETRIKNLLDSDDIRHMLNALEQLGVDYQLSDDRSVCLVKGKGGALVASGRYELFLGNAGTAMRPLTAALCLGGGDFTLTGEPRMFERPIKHLVDALLPLGANIEYLQAAGYPPLKITGTGLTGGEIAIDGSISSQFLTALLMSAPLASEDITITVKGDLVSKPYIDITLDLMAKFGVSVTNNDYQSFSVTGGQSYRSPGEIMVEGDASSASYFLAAAAISGGTVRVYGVGKNSVQGDIRFADVLAQMGAEISYGEDYIEASKAKLDGVDVDLNHIPDAAMTIATTALFANGPTRIRNVYNWRVKETDRLTAMATELRKVGAEVVEGEDFIEITPPARITSAAIDTYDDHRVAMCFSLAAMGDAAITINDPGCTAKTFPTYFELFGKICA
>NZ_CP019343.1|WP_085757002.1|354938_355826_-|prephenate-dehydrogenase/arogenate-dehydrogenase-family-protein
MTIAIDQITILAVGLIGGSLAKALKANGFSGEIVGWGRREVSLKKGLELGVIDRYSLDLNEAVKGADLIVVATPTLIAADMIKQLVSMVDEHVIITDVASVKGNLLVAAKQAFGKVPPNLVLGHPIAGSEQSGVDAAKADLFVNHRVILTPTEETNPDALQAVKSLWESTGADLVEMPVDEHDEVLAATSHLPHILAYTLVDALAGNPEQQNIFRFAAGGFRDFTRIASSDPTMWHEISLANRDALLKMIDTFSDQLGDLRQAIADGDSENIVASFTRAKSARDKFAQMLEEQQK
>NZ_CP019343.1|WP_085757003.1|355853_356957_-|histidinol-phosphate-transaminase
MSCDYIALANQGVQGLSPYQAGKPIEELQRELGLKHIVKLASNENPLGPSPNVLAAVDKAAAEIARYPDSNGFELKAALANKLGVAAEQITLGNGSNDVLELITRAYIEPGKSAVYSQHAFIVYPLAIQACSGRSIVTKAKDWGHDLNAMADAIADDTQLLFIANPNNPTGTVVDEASLVNFLDKVPANVVVVLDEAYFEYVEASDDDSVDGVALLKHYPNLIVTRTFSKAYGLAALRVGYAIASPEITDVLNRVRAPFNVNSMALAAAQAVLADDEYLQQGRQVNAEGMKQLTQGFDTLGLTYIPSAGNFIAVEFATDTAELYQKLLKEGVIVRPVGIYEMPNHLRVSIGLEAENTALLDALKKVL
>NZ_CP019343.1|WP_085757004.1|357106_357754_-|DUF4114-domain-containing-protein
MKHIITGLLAAACSFNAAAFTVNFLDTNPISFGSSWDGTDLLVGNVLGARSETAVLNQVDIATFSGTGAVSVILEEVAGYETRTTFGYYTGIDDGSGMTQLFSGADTNGAEASFDLGVVTDFGFYIDSNGPDRNPGIMYSDSLLNDGRHQMAIFEIVGEADTYIIGWEDLNISGSSDDDYQDMILRVKIQNVPEPGSIALLALGLIGLTIARKRV
>NZ_CP019343.1|WP_085757005.1|357947_358811_-|LysR-family-transcriptional-regulator
MKNLPIEMLRSFVVINEEGGFTAAADKLGRTQPAISQQLKKLEQLLDRSLMDRDSPKLELTPAGESLLTYARQILSLNDEAVGYFSSPPVSGRIRFGIPSEFAITLLPKIVSRFAKAYPDVTLEVNCDLSRNLLSDDQRNEYDLILALHDKVSAQQRRSIKNYIKTDELVWVSSASSRAHSQETLPLVAAPSGCIYRQRALRVLGKAKRSCRIVYTIPDLTGIQAAIDEGLGVTVLARSTVPDSLAIIEQSKHLPVLGTVGISLKQMDNTNNRAVKVLAEFIKSGLL
>NZ_CP019343.1|WP_085757006.1|358958_360086_+|glycine-cleavage-system-aminomethyltransferase-GcvT
MTDQDLLQTPLNDLHIELGAKMVPFAGYSMPVQYPLGVLKEHLHTREQAGLFDVSHMGQVRIKGAGITEALEKLVPVDLATLALFKQTYAVLTNEAGGILDDLIITRWAEDEFFLVVNAGCKQQDIAHLQQHLPGFELEVMDNHALLALQGPQARSVMDELLPAATELRFMSGCFDSIELDGDSTECFITCSGYTGEDGYEISVPADKACALARKLLSFEQVEAIGLGARDSLRLEVGLCLYGHDMNTETTPIEAGLIWSISKSRRAGGEKAAGFIGAEAILQQIADGAPRKRVGLQISGRAPAREGAELVNTQGHVIGQITSGGFGPSLGGPVAMGYVETEYAAIGTQIFVLLRKKQIPVEVVKMPFMPQNYVR
>NZ_CP019343.1|WP_085757007.1|360190_363079_+|aminomethyl-transferring-glycine-dehydrogenase
MLNNNASLLELEAHDEFIQRHIGPDDQQQQDMLQGLGVNSLDELISSTVPANILREKAMDLPPPKTESEALAELKALAAQNTVMTNMIGQGYHPTKTPNVILRNVLENPGWYTAYTPYQPEIAQGRLEGLLNYQQMVMDLTGMELANASMLDEGTAAAEAMALLKRVNKKNRANQFFVANDCHPQTIAVLKTRAETYGFELVFGEAEELVGQEVFGALLQYPGTYGHITDLGSLIEQAHGQNTLVVVAADIMSLVLLTPPGELGADIVVGNSQRFGVPMGFGGPHAAFFATKDKYKRSTPGRIIGVSIDRHGNQALRMAMQTREQHIRREKATSNICTAQALLAIMASFYAVYHGPEGLTTIANRIHRLTNILANGLNKLGLTPENSDWFDTLTYQVDDQQSDIIERAVSAGINLRIIAEDRVAISLDETTTRDEIETLWAVMSGNNIDFSIESIDVETANHSPIPEKNRRSSDFLTHPVFNQHHSETEMLRYMKRLESKDIALNHSMIALGSCTMKLNATAEMIPITWPEFGSMHPFAPQYQAQGYLTMFKQLEKMLIEATGYDAISLQPNSGAQGEYAGLLAIKKYHESRGDFNRDVCLIPSSAHGTNPASAAVAGMRVVITECDANGNVDMADLKEKAERHADDLAALMVTYPSTHGVFEESITDICDLIHEHGGQVYVDGANLNALVGIAAPGKFGADVSHINLHKTFCIPHGGGGPGMGPIGVGKHLAPFLPNNPAQPIEGLAIDNDTVSSASWGSAAILPISWMYVAMMGEEGLKKATQVAILSANYIAKKLSDHYPVLYTGRNDRVAHECIIDMRPLKEATGISEEDVAKRLMDFGFHAPTMSFPVPGTLMIEPTESEPKEELDRFIEAMVTIRKEIAQVEAGELEENDNPLKNAPHTSMEATSSDWEHAYTREQAVFPVGSDNKFWPPVARIDNVFGDRNLVCSCPSIDSYREE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019343_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019343_2

933642-933995

Orphan

Consensus_repeat	Method
GGTGGATTGTAATCCACC	CRT

7 spacers

The CRISPR arrays of NZ_CP019343_2

>merge|NZ_CP019343|2|933642-933995|CRT
GGTGGATTGTAATCCACCGATTATGACGGGCTCTTAGCCGGGCTTGGTGGATTGTAATCCACCCTACATACTTAATTCTCGCAAGCATTCCAAGTAGGGTGGATTGTAATCCACCGGTTATGACGGGCTCTTAGCCGGGCTTGGTGGATTGTAATCCACCCTACATACTTAATTCTCGCAAGCATTCCAAGTAGGGTGGATTGTAATCCACCGGTTATGACGGGCTCTTGGCCAGGCTTGGTGAATTGTAATCCACCCTACATACTTAATTCTCGCAAGCATTCCAAGTAGGGTGGATTGTAATCCACCGGTTATGACGGGCTCTTAGCCGGGCTTGGTGGATTGTAATCCACC

>NZ_CP019343|2|1|933642-933995|CRT
GGTGGATTGTAATCCACC	GATTATGACGGGCTCTTAGCCGGGCTT
GGTGGATTGTAATCCACC	CTACATACTTAATTCTCGCAAGCATTCCAAGTAG
GGTGGATTGTAATCCACC	GGTTATGACGGGCTCTTAGCCGGGCTT
GGTGGATTGTAATCCACC	CTACATACTTAATTCTCGCAAGCATTCCAAGTAG
GGTGGATTGTAATCCACC	GGTTATGACGGGCTCTTGGCCAGGCTT
GGTGAATTGTAATCCACC	CTACATACTTAATTCTCGCAAGCATTCCAAGTAG
GGTGGATTGTAATCCACC	GGTTATGACGGGCTCTTAGCCGGGCTT
GGTGGATTGTAATCCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019343.1\|WP_085757496.1\|938445_939378_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293834
NZ_CP019343.1\|WP_085757485.1\|924882_925293_-\|GFA-family-protein	unknown	unknown	gnl\|CDD\|226314
NZ_CP019343.1\|WP_085757492.1\|935081_935663_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085757497.1\|939378_940173_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|226005
NZ_CP019343.1\|WP_085760469.1\|925592_926600_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085757487.1\|927353_928085_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085757500.1\|941903_942572_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223698
NZ_CP019343.1\|WP_085757493.1\|935646_936864_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340913
NZ_CP019343.1\|WP_085757489.1\|929092_932197_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP019343.1\|WP_085757483.1\|923934_924387_-\|DUF3291-domain-containing-protein	unknown	unknown	gnl\|CDD\|378694
NZ_CP019343.1\|WP_085757488.1\|928094_928895_-\|class-D-beta-lactamase	unknown	unknown	gnl\|CDD\|225322
NZ_CP019343.1\|WP_085757490.1\|932196_933414_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP019343.1\|WP_085757498.1\|940173_940860_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368697
NZ_CP019343.1\|WP_085757486.1\|926824_927199_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085757495.1\|937695_938409_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085757484.1\|924415_924886_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_CP019343.1\|WP_169713905.1\|922748_923825_+\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190
NZ_CP019343.1\|WP_085757499.1\|940859_941876_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085757494.1\|936897_937626_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|315383
NZ_CP019343.1\|WP_085757491.1\|934169_935048_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|227135

Protein	Function_ID	Function_description	E-value
NZ_CP019343.1\|WP_085757496.1\|938445_939378_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293834	cd16276, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	5.76413e-55
NZ_CP019343.1\|WP_085757485.1\|924882_925293_-\|GFA-family-protein	gnl\|CDD\|226314	COG3791, COG3791, Uncharacterized conserved protein [Function unknown].	1.69642e-22
NZ_CP019343.1\|WP_085757497.1\|939378_940173_-\|c-type-cytochrome	gnl\|CDD\|226005	COG3474, COG3474, Cytochrome c2 [Energy production and conversion].	5.86836e-29
NZ_CP019343.1\|WP_085757500.1\|941903_942572_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	1.98859e-36
NZ_CP019343.1\|WP_085757493.1\|935646_936864_-\|MFS-transporter	gnl\|CDD\|340913	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters. This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.99162e-41
NZ_CP019343.1\|WP_085757489.1\|929092_932197_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	2.95289e-172
NZ_CP019343.1\|WP_085757483.1\|923934_924387_-\|DUF3291-domain-containing-protein	gnl\|CDD\|378694	pfam11695, DUF3291, Domain of unknown function (DUF3291). This bacterial family of proteins has no known function.	1.76434e-60
NZ_CP019343.1\|WP_085757488.1\|928094_928895_-\|class-D-beta-lactamase	gnl\|CDD\|225322	COG2602, COG2602, Beta-lactamase class D [Defense mechanisms].	2.48588e-78
NZ_CP019343.1\|WP_085757490.1\|932196_933414_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	4.36485e-28
NZ_CP019343.1\|WP_085757498.1\|940173_940860_-\|hypothetical-protein	gnl\|CDD\|368697	pfam05996, Fe_bilin_red, Ferredoxin-dependent bilin reductase. This family consists of several different but closely related proteins which include phycocyanobilin:ferredoxin oxidoreductase EC:1.3.7.5 (PcyA), 15,16-dihydrobiliverdin:ferredoxin oxidoreductase EC:1.3.7.2 (PebA) and phycoerythrobilin:ferredoxin oxidoreductase EC:1.3.7.3 (PebB). Phytobilins are linear tetrapyrrole precursors of the light-harvesting prosthetic groups of the phytochrome photoreceptors of plants and the phycobiliprotein photosynthetic antennae of cyanobacteria, red algae, and cryptomonads. It is known that that phytobilins are synthesized from heme via the intermediary of biliverdin IX alpha (BV), which is reduced subsequently by ferredoxin-dependent bilin reductases with different double-bond specificities.	1.043e-13
NZ_CP019343.1\|WP_085757484.1\|924415_924886_-\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	1.30324e-09
NZ_CP019343.1\|WP_169713905.1\|922748_923825_+\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	1.12636e-132
NZ_CP019343.1\|WP_085757494.1\|936897_937626_-\|hypothetical-protein	gnl\|CDD\|315383	pfam12695, Abhydrolase_5, Alpha/beta hydrolase family. This family contains a diverse range of alpha/beta hydrolase enzymes.	3.6268e-37
NZ_CP019343.1\|WP_085757491.1\|934169_935048_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|227135	COG4798, COG4798, Predicted methyltransferase [General function prediction only].	8.74903e-40

>NZ_CP019343.1|WP_085757490.1|932196_933414_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MKFLKSFKINSLVVLSLGVIVAAGLVVAKPKPQAMPMVEQAAPAADVIYVSPESRSLVVKTQGTVTARREIDVVAQVSGVVTSVSDQFVDGGFFDDSHPLLTIEEHDYRFALVRAESKLASAKEVLATERGRQRVAKREWRELGNKDANALFLREPQIASAEAAIKSAEADRDQAQMDLDRTQLVAPFKGRIWETYVDIGQYVTAGTKIARVYSTDVVEVRLPLSDRQVALLDLPLSYQGADTATPIPVTLKGVFGGKEWQWQGTITRTDASIDVKSRMVFAVAEVAMPFSREAGSQRPPLSIGQFVHADIRGAVQQDVVSLPRKALHPGDKVWVLDQDDRLKQLSVSVLQSNVNQVMVKGDFSQQSRVVVSSLSVNVAGMKVTPVVDAEQYAALTDKKSSVAIN
>NZ_CP019343.1|WP_085757489.1|929092_932197_-|efflux-RND-transporter-permease-subunit
MKRIVEWFIANPIAANLLMVLIIIGGLASLSSVSKQFFPADKGSNIRMTMLYPGAGPAEVETQIVMRIEEAIDDIDGIDEIKSYAREGGAELTIKVMAGYDGQRLVNDLKSRVDTITTFPVDAERAQIAEIGWQRRMITVALYGDIDEASLKELGEQIRDDLAGLSDVGKVELKDPRDYEMSIEVSEDSLRRYGLRFDDVVNAIRNSSLNLPAGKLRTDKGDIQLQTRAQGYTAVDFETIVLLRDLNGTQIFVGDVATVVDGFAETDIIGRFNNQPALSLNIFSSSEPNVIKTATAVRDYVESYKPQLPPGVEMKVWKDMSEAYELRIGTLLSNGLGGLLLVFLVLMLFLRPLLAMWVCIGIAVAFLGALWMIPVGGGSLDMVSLFAFILILGIVVDDAIIVSESVYSHQQGGLEGVAGANKGATLVIKPVIFAVVSTMIFFSILFLLPGNNGSPTAIALVVMAALCFSLIESLLILPAHLAHMGPEKKSKNPWMLKFQLLREACANGMLTFADKVYRPFLDRCMAAKRLTVSSFFVLFLISLSLLMGGWLQSSFFPRVPADFMKANITMPEGGPFAEVRQTVDRVEQAAKLVKKEFNQQYDYPVIGNIESNAVNNVVRVTVELLNVDKAKIPPQALKASWQSKIGDLAIADEFDINFTVINVGKPIELILSADDTQTLREFSREVREEFAKYPAVFNVRDSLDSPRPEIQLRLKPQAQTLNLSLADVAKQVRRGFYGEEVQRIPRAREDVKVMVRYPNAERRSEDFLRDMRIRTPDGTEVPFEAVAEVDYVDGYAQIERLDRQRISIVKADLNRSMGSAGEITAAVMRTKMPEWQSRFSGAKVVTSGEQKEFKEFGGAMVKLLFGGIVIIYGLIAVAFKSYWKPLLVLAAIPFGLTGAILGHVILGIEISMFSMMGIIAAVGVVVNDNLVLIDRINLLRDQGVSVKAAILEGAQDRFRPIILTSMTTLIGLLPIMLETSVQAQFLIPMVVSLAFGVMAATVISLVFVPVLYLSLDSRMERIKVLFQPKKTALV
>NZ_CP019343.1|WP_085757488.1|928094_928895_-|class-D-beta-lactamase
MLIKSGFLLAAVFFFSSPGYGQGNIVERSDWVQYFEQFAAKGTIVVVDERGTYPRNWVFDHSRALKRFSPASTYKIPHTLFALDAGVVQDEFQVFQWDGANRDYKLHNQNQDLRSAMKYSTAWVYEQLAKKIGKKRSQRYLMEIDYGNKDAYTSSGNYWVDGNLAISAYEQIDFLKKVYNEQLPFSTEHHGIVKHIMLVEQGDDWRLCAKTGWEGRYGWWVGWVEWPTGPVFFALNIDTPNRKEDLYKREAIVRVVLQSLYALPSE
>NZ_CP019343.1|WP_085757487.1|927353_928085_+|hypothetical-protein
MNISATLTAHVLQRLQELEAITEVCQGNKPYHSFYHPESGDEVGYIRLYKGEHILDHVVEVNIRAATMEMDAYMIMAFTQPGSLYPHLAFDTELLPNDSAFHIDLLHKREFATDIDYIQSVMAPLSDAFDAANANPDFRFSDATHLMKALLNPWMASYHCSPEHLAQSQTTIDAYLDHWLSLADRAEGEVIVNTSHSHQVADYDRQHRAAIFDAKVDILWDMIANLIGTDSRDLILTLVRGQK
>NZ_CP019343.1|WP_085757486.1|926824_927199_-|hypothetical-protein
MRVFIAALLSSLSVVPFYLILLAVSGDLDNRLLYTVLIGALVVATVAIFCIALPLHLLLTRLGLVRGYYYIGAGFFAPAIFTLLLNPLGSDVASWVKWQALGLGLLGGSVAFVFWSLATAKSKT
>NZ_CP019343.1|WP_085760469.1|925592_926600_+|hypothetical-protein
MTATHYLGMLGSLLLMAVVVAVGPYSSADMFAPDQGPGWYYWKLQDPDFMSRFTSWGLYSLHQVAIWGTIAYAQIQRPKYSKTLNPVNIAALGLNVLFILLHILQTKVWYDGLAQDTPVWSSQASVVFMLVFVLMMENSRRGLFFGKKIEFVDKPTDFLKRYHGYYFSWAVIYTFWFHPIEDNLGHMLGTFYVIMLMLQGSLMFTRYHMNRKWTLWLECFVLIHGSLVAYMTIEGDQWKMFFFGFLTLFVVTQMHGIGLGNKTRTAIVLAYIGGVIAAYYGNWGDMAAIIRIPFAEYGFVFLFAAIAWLPVGLGRLVKFRKAKPEEPIPTNVSNA
>NZ_CP019343.1|WP_085757485.1|924882_925293_-|GFA-family-protein
MIYKGSCHCQAVTFEVEAPEHIEADYCNCSICAKSGYLHLIVPLSKFNLLTGAEALSTYTFNSGVAKHTFCKVCGVKPFYTPRSNPDGMDINIHCLDNRPTSIEVVDFDGQNWEKHAHQLAHKSKEPSLFAMVEEL
>NZ_CP019343.1|WP_085757484.1|924415_924886_-|MOSC-domain-containing-protein
MSVMKKVVALFIAEDGEAPMQAVDTVQLESGKGIVGDRYYHDKGTFSEKLAGLPDRELTLIESEKIADFNQTFGFDFSSGDFRRNIVTEGVDLNSLVDQEFSIGAVRLRGIRLCEPCAHLAGVLVPELLPGMVHKAGLRAQILEDGLINISDPIQI
>NZ_CP019343.1|WP_085757483.1|923934_924387_-|DUF3291-domain-containing-protein
MSYQLAQFNIAQFLLPMEHPNNADFINNIDRVNGAAESQPGFIWRLVGDGGVDNALEVKAYEDNHTAVNMSVWQDQQSLEEFVFRSEGHLSIMRRRREWFDKMEFYSVLWWVKAGHQPTVVEAKERLEQLRDNGPTVNAFTFRSSFPAPD
>NZ_CP019343.1|WP_169713905.1|922748_923825_+|NADP-dependent-oxidoreductase
MTDTNRQWRLKRFVQPDEILGEEHYELSESPMPTIDDEQILVKTLLLGTSPAQRMYVTEERTFHIAVEIGEVMSGRGVGVVMESKHPDFEAGEIIQATLGWQDYVALTPDDKSDTGKNVRTVQKVPNPVRPLTTIMGLFGQLAFSAYVGIIEVGQVKEGDVVLVSSAAGGVGSVACQLARIQGASKVVGIAGGQEKCDWLVEQGLCDSAIDYKKPGQDLAAAIGEHCPDGADVYLDNVGGAMLDAALQNIAVGARVVICGMISTEYMNPRPDGPKHYFNLLYKRSRMEGFFVFDYVPRWPEFEEQLREWYSQGKLKLVDDVFDGLPSAPRALGSLFTGGHTGGCVIRVADDPENIPAI
>NZ_CP019343.1|WP_085757491.1|934169_935048_-|class-I-SAM-dependent-methyltransferase
MIIKHSPVIVNTALLAVSLLLAACTSTSVSDDDQAASAKLTSVLDSRSAELKARDISRHPKQTIEFFGVTPGMKIAEVLPGGGWYSKILAPYVGSEGAFYGINYADTMWPMFGFFKPEVIAQRVEAHKAFGDKVATYPGAGNVPSAGYAFGGIPESLNGTLDAVIMVRALHNLNRFEAKGGTRTKALKEVNAMLKPGGIVGVVQHRAPADADDEWANGSNGYLKQADVVAMFEQAGFELVGSSEINANPKDQPVVGDSVWRLPPSLRTSPENKAVNMAIGETDRMTLKFVKK
>NZ_CP019343.1|WP_085757492.1|935081_935663_-|hypothetical-protein
MQPQSNQAPPSSLSTRLAGFATLPYVMLSLLAFLPFLAVNNLFWSPLFIERFGYQPLDLALGLDGVSVQEYLTAYGEEGRSWYLRFQIYDFFLPLFGAIMFVLWAAWLITMYWPEQPGKLRFAWLGTLPMFADWAENIGFITQLMMFPEVSVDVGNITFLLSQIKITLLSGFGIGLLIASMALLVVPLSGPEE
>NZ_CP019343.1|WP_085757493.1|935646_936864_-|MFS-transporter
MKLYYPWLMAVLAALTLLVSNGMTLTGLSVFDESLLAEFGWSRGELKLRDLITLLMTGILAPFAGILIDRYGVRICFMAGWLVLIIAFWMYGNISSLMDMYLIHIMFAIVLVFCGLNPGVILVSQWFTEKRGAAIGIALVGTSLGGAVFPQYGTRMIEALGWRDAFHSEIIFPVILLLLAFFVIKNKPSDIGMEPVGGKEEVSTEGELPGMEYREAISTVSFWALASVAMFTFYSVLGISAHLFLYMRDLDFSPPVAANFISTFFLCALAGKFVFGFLADYLDHKKVFYGNISVMLVGSIILAAMQKDLIWLSVVLFGLGWGGVYTMIQLTAINCFGLKAAGKILGTITILDAFGGGLGIWLSGVLNDTYGNYELAFQIFAALIFLALLAITQIKNIPVRSAAAE
>NZ_CP019343.1|WP_085757494.1|936897_937626_-|hypothetical-protein
MAFTDRYMMMLRIFTLLIVASLVWGCSSKPMPEALERLATAEEADDYYLFKADNPISDTCYIYYPGGLVHAEAYAPYTADVAQAGVHTFLLKLTLDMAMMDVDAANDAKQSEFAKANCKNYVLGGHSLGGIGIAMYAETNQDDGLLFISSYAHKEGLIDKHPQPVMLVYGANDLLSTEEEILGARGNLPAEAIYFKIEGGNHAQMGHYGPQNNDGEATISREEQQKILVEKTVEIIQIMSEQ
>NZ_CP019343.1|WP_085757495.1|937695_938409_-|hypothetical-protein
MNKLSKTLLIASAIALTACGGDDGEEKVYTTFAEGPQDIIPADYCEKIQTYMASTTMPVVNEVHQNYDSFVKSKPAIEPLTSHQYIHYLPLTVNGQPEEFPAVVSCKLKTADRIQGVHGDDKAGEEQRCSDIIKRDVEQVVAEMAAAGIANNNSNYLIDEDEVSRIGPKWLNPWPYETAVRDAENILHFRSKALLVPYSVLIPMPDRFKGTHYCHLPTKQYIQAVLTDAITAPDNFE
>NZ_CP019343.1|WP_085757496.1|938445_939378_-|MBL-fold-metallo-hydrolase
MPNRFRPILTLLLCCFMPAAWSQYAPPGIVPTETEQLAEGLYAFRWGAYRSIFLVSDQGVIVTDPISADAAKVYRQEIAKITDQPVKYVVYSHAHWDHAAGGAIFKQEGAQFVAQQRCVDNIKSSPHPDIVMPDITFDKQHTVTVGDKSMDLYYYGPSHGTCLVAMIPRPHPMLYVVDVVTPPSGWYMPWDPQVADFHFYNIDAYLAELEALAEREGLTQVIASHLVPALNKQGKIAPSATLGDIKAVSERRRFWQQSMAAVKAEMDKGTISFMVHRKVDVTPFEDTRGYNEKKFRVLLQRIASYYAIGR
>NZ_CP019343.1|WP_085757497.1|939378_940173_-|c-type-cytochrome
MFKKLLLIPLLLAPALFAETTISPDALKYADYFQGKKTFQGRCSACHTLAEDSMDLTGPALWNMFERKAGAKPGFSFSDGMKAAGFQWTPEHLNQFLKNPKKYIPGNTMGIPEPVPGKLRLGLISFMMVETGAASWPRPENAMTEKADDKSLPPEERFPSFWNHMMSNTVRYRMNSGEEEIIFEAYFHPSGKVSTNTKARGFWYLTEKDFFCYALHKLDIQPSQFVECFPVAAMAIPRFSQELWQSKPVDGVVLYGGILPGRPE
>NZ_CP019343.1|WP_085757498.1|940173_940860_-|hypothetical-protein
MNQDQRLQAVLDKVSQYMPLEEVEVDADISDNKAFLKLVTVSCHNWAAGSIPRIGALRMTVKVPALDALTMIFYPQADSDAPIFLFFFLITGRKVISHFNVCCPFDDQAYLDKWVKPLDAIQATYPEFECMDRYPEWMKAYQHDCTVYGLFKQDRLDDLSNCSLEYLNHYLKLVAENEKTVDSERLQTIADFHDHFKEDIRTRDKAQGMTSKFIGKDKAKRIFYEVVT
>NZ_CP019343.1|WP_085757499.1|940859_941876_-|hypothetical-protein
MTEQHSSSQEKTFSIWWGMAGCVAIMAVVWIVGPYSEDVVLAPYREGFWYRWQLAEPTFWTRFTAWSGYALHQITAWGIIYYAQHIYAKGKKPKYTNGLHSFNIWALAANAFFVGLHILQTKIWYDATAQDVHEATSFGSVTFMLVFILIMENQRRGMFFGKRAPLLKEAGAFLRRYHGYYFSWAIIYTFWYHPIEITYGHLLGTFYILLLILQGSLFFTRMHINRSWTLFLEMFVVIHAIAVAIVQQGEVATARFFFGFIVVFLITQMHGLKLSVKTQWALVALCAVLMALYYPARSSVEEFYRAFQVPLMEYGLLFILLIVLWPAYKLMGFSSEKK
>NZ_CP019343.1|WP_085757500.1|941903_942572_-|glutathione-S-transferase-family-protein
MAASIQLYSNDGCPYAQRTRIALLEKGLDFDFAEVDLANKPDWFVEASPSGKVPVLVHDGHRLFESAIINEYIDEVWPQPALMPADAVLRAQARIWVDKFSAFASTLFYIGVKKDQQELQQLTEKLKAELQTIEDNGFAVFSGEGPYWFGQQLSLVDINFYTFFERMPMVEQKVGINLAAYPLISRWYQAMSDRESVKATARTAEQHIESFNRLSDRLAARL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019343_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019343_3

1145559-1145783

Orphan

Consensus_repeat	Method
AGTTTTCTTCCACAGGCGTATC	CRT
CCGAGGGTATTTAAAGTTTTCTTCCACAGGCGTATCAG	PILER-CR
GGTGTTTAAAGTTTTCTTCCACAGGCGTA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP019343_3

>merge|NZ_CP019343|3|1145559-1145783|CRT,PILER-CR,CRISPRCasFinder
ACTTTTCTTCCACAGGGCTGTCGCTAGGGTTTTGATCAAAATGCAATCAACTACCGTGGGTGTTTAAAGTTTTCTTCCACAGGCGTATCAGTTCTGACTTACTTAAAAATCAGACTACAAGATAAGGTGCTTTAAAGTTTTCTTCCACAGGCGTACGCCTAGGATTTTGATCAAAGGGTAATCAACCCCGAGGGTATTTAGAGTTTTCTTCCACAGGCGTATCAG

>NZ_CP019343|3|2|1145559-1145781|CRT
ACTTTTCTTCCACAGGGCTGTC	GCTAGGGTTTTGATCAAAATGCAATCAACTACCGTGGGTGTTTAA
AGTTTTCTTCCACAGGCGTATC	AGTTCTGACTTACTTAAAAATCAGACTACAAGATAAGGTGCTTTAA
AGTTTTCTTCCACAGGCGTACG	CCTAGGATTTTGATCAAAGGGTAATCAACCCCGAGGGTATTTAG
AGTTTTCTTCCACAGGCGTATC

>NZ_CP019343|3|1|1145612-1145783|PILER-CR
CCGTGGGTGTTTAAAGTTTTCTTCCACAGGCGTATCAG	TTCTGACTTACTTAAAAATCAGACTACAAGATAAGGTGC
TTTAAAGTTTTCTTCCACAGGCGTACGCCTAGGATTTT	GATCAAAGGGTAATCAACCCCGAGGGTATTTA
GAGTTTTCTTCCACAGGCGTATCAG

>NZ_CP019343|3|2|1145617-1145779|CRISPRCasFinder
GGTGTTTAAAGTTTTCTTCCACAGGCGTA	TCAGTTCTGACTTACTTAAAAATCAGACTACAAGATAAG
GTGCTTTAAAGTTTTCTTCCACAGGCGTA	CGCCTAGGATTTTGATCAAAGGGTAATCAACCCCGAG
GGTATTTAGAGTTTTCTTCCACAGGCGTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019343.1\|WP_157117864.1\|1157879_1159130_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226249
NZ_CP019343.1\|WP_085757673.1\|1159119_1161393_-\|DNA-topoisomerase-IV-subunit-A	unknown	unknown	gnl\|CDD\|235503
NZ_CP019343.1\|WP_085757663.1\|1143390_1143960_-\|elongation-factor-P	unknown	unknown	gnl\|CDD\|234788
NZ_CP019343.1\|WP_085757659.1\|1137139_1138216_+\|tRNA-dihydrouridine-synthase-DusB	unknown	unknown	gnl\|CDD\|129820
NZ_CP019343.1\|WP_085757656.1\|1132535_1133879_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	unknown	unknown	gnl\|CDD\|236307
NZ_CP019343.1\|WP_085757661.1\|1140261_1141551_+\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|234856
NZ_CP019343.1\|WP_085757664.1\|1144167_1145457_+\|integrase-family-protein	unknown	unknown	gnl\|CDD\|271177
NZ_CP019343.1\|WP_085757667.1\|1149078_1150785_-\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|223740
NZ_CP019343.1\|WP_085757674.1\|1161655_1161904_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085757657.1\|1133941_1134838_+\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|283886
NZ_CP019343.1\|WP_085757666.1\|1147829_1148837_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085757668.1\|1151224_1152274_+\|EF-P-beta-lysylation-protein-EpmB	unknown	unknown	gnl\|CDD\|163533
NZ_CP019343.1\|WP_085757669.1\|1152465_1154265_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085757670.1\|1154383_1156468_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|376350
NZ_CP019343.1\|WP_085757658.1\|1135208_1136852_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|378759
NZ_CP019343.1\|WP_085757665.1\|1145798_1146458_-\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_CP019343.1\|WP_085757671.1\|1156503_1157715_-\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP019343.1\|WP_085757660.1\|1138665_1140243_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NZ_CP019343.1\|WP_085757662.1\|1141719_1142361_+\|2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone-monooxygenase	unknown	unknown	gnl\|CDD\|225492
NZ_CP019343.1\|WP_085760476.1\|1138263_1138563_+\|DNA-binding-transcriptional-regulator-Fis	unknown	unknown	gnl\|CDD\|179020

Protein	Function_ID	Function_description	E-value
NZ_CP019343.1\|WP_157117864.1\|1157879_1159130_+\|hypothetical-protein	gnl\|CDD\|226249	COG3726, AhpA, Uncharacterized membrane protein affecting hemolysin expression [General function prediction only].	7.25854e-08
NZ_CP019343.1\|WP_085757673.1\|1159119_1161393_-\|DNA-topoisomerase-IV-subunit-A	gnl\|CDD\|235503	PRK05561, PRK05561, DNA topoisomerase 4 subunit A.	0
NZ_CP019343.1\|WP_085757663.1\|1143390_1143960_-\|elongation-factor-P	gnl\|CDD\|234788	PRK00529, PRK00529, elongation factor P; Validated.	1.37608e-110
NZ_CP019343.1\|WP_085757659.1\|1137139_1138216_+\|tRNA-dihydrouridine-synthase-DusB	gnl\|CDD\|129820	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family. This model represents one branch of COG0042 (Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family). This branch includes NifR3 itself, from Rhodobacter capsulatus. It excludes a broadly distributed but more sparsely populated subfamily that contains sll0926 from Synechocystis PCC6803, HI0634 from Haemophilus influenzae, and BB0225 from Borrelia burgdorferi. It also excludes a shorter and more distant archaeal subfamily.The function of nifR3, a member of this family, is unknown, but it is found in an operon with nitrogen-sensing two component regulators in Rhodobacter capsulatus.Members of this family show a distant relationship to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. [Unknown function, General].	1.01917e-146
NZ_CP019343.1\|WP_085757656.1\|1132535_1133879_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	gnl\|CDD\|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	0
NZ_CP019343.1\|WP_085757661.1\|1140261_1141551_+\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
NZ_CP019343.1\|WP_085757664.1\|1144167_1145457_+\|integrase-family-protein	gnl\|CDD\|271177	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain. Rci protein is a tyrosine recombinase specifically involved in Shufflon type of DNA rearrangement in bacteria. The shufflon of plasmid R64 consists of four invertible DNA segments which are separated and flanked by seven 19-bp repeat sequences. RCI recombinase facilitates the site-specific recombination between any inverted repeats results in an inversion of the DNA segment(s) either independently or in groups. HP1 integrase promotes site-specific recombination of the HP1 genome into that of Haemophilus influenza. Bacteriophage Hp1_like integrases are tyrosine based site specific recombinases. They belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	4.38485e-13
NZ_CP019343.1\|WP_085757667.1\|1149078_1150785_-\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	2.04571e-57
NZ_CP019343.1\|WP_085757657.1\|1133941_1134838_+\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|283886	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.	5.27285e-125
NZ_CP019343.1\|WP_085757668.1\|1151224_1152274_+\|EF-P-beta-lysylation-protein-EpmB	gnl\|CDD\|163533	TIGR03821, EFP_modif_epmB, EF-P beta-lysylation protein EpmB. Members of this radical SAM protein subfamily, including yjeK in E. coli, form a distinctive clade, homologous to lysine-2,3-aminomutase of Bacillus, Clostridium, and methanogenic archaea. Members of this family are found in E. coli, Buchnera, Yersinia, etc. The gene symbol is now reassigned as EpmB (Elongation factor P Modification B). [Protein fate, Protein modification and repair].	0
NZ_CP019343.1\|WP_085757670.1\|1154383_1156468_+\|EAL-domain-containing-protein	gnl\|CDD\|376350	pfam00563, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.	3.69567e-42
NZ_CP019343.1\|WP_085757658.1\|1135208_1136852_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|378759	pfam11906, DUF3426, Protein of unknown function (DUF3426). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 262 to 463 amino acids in length.	1.53689e-44
NZ_CP019343.1\|WP_085757665.1\|1145798_1146458_-\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	2.22889e-24
NZ_CP019343.1\|WP_085757671.1\|1156503_1157715_-\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.76663e-101
NZ_CP019343.1\|WP_085757660.1\|1138665_1140243_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_CP019343.1\|WP_085757662.1\|1141719_1142361_+\|2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone-monooxygenase	gnl\|CDD\|225492	COG2941, CAT5, Ubiquinone biosynthesis protein COQ7 [Coenzyme metabolism].	1.55994e-78
NZ_CP019343.1\|WP_085760476.1\|1138263_1138563_+\|DNA-binding-transcriptional-regulator-Fis	gnl\|CDD\|179020	PRK00430, fis, DNA-binding transcriptional regulator Fis.	6.95511e-43

>NZ_CP019343.1|WP_085757664.1|1144167_1145457_+|integrase-family-protein
MSDKLKLTDNAVDRWLRANRKKNEVLRDTQVEGFHVRVINDSPQGELAVASYCIDFRVSSTGKKRRLKVASFKERTVSQARKLAGDRKSEGRSGIDVIKDREHERTLQQQEKDKAANALPTIQSWFDSTHRDHLYERDDTGKRRINYLEKDWLPALGHLTAPELNIKTISNQMKAILDDRAYGQDTKPLRESTAKKYLEYFKEACSAYCAQHECPNPLNNLKWATVKKTGKLTFAEIKDNEHEGSPRTKIPQTTFIVIVKELESLYKESENLLPLALLFMAYSGLRPSDIVTLQWSHLKLEGDSPYLRKVLIKSKHIKSSPTIIPLHSDAVATLKKAEKHRVSDFVFSDNMKAKNTQSLNYWWDKVRENSEFDFPPYQLRHNVAHRIIDAGGTIVNVAAVLGNTVEVCIRNYLNTDLESTAELLRSLKF
>NZ_CP019343.1|WP_085757663.1|1143390_1143960_-|elongation-factor-P
MATYSTNEFKNGLKLMVEGDPCTIVENEFVRPGKGQAFSRVKFRNLKTGRIWERSLKSGETLEAADVMEMEMEYLYNDGEFWYFMEPETFEQHQADATAVGDEAKWLKEQDRCEVTLYNGSPLTISVPNFVELEVTETDPGLKGDTAQGGSKPATLQTGAVVRVPLFVNIGEVLRIDTRTGEYVSRAKG
>NZ_CP019343.1|WP_085757662.1|1141719_1142361_+|2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone-monooxygenase
MQRRLSFVDKLICNADQALRTLVPTAANSIIPSPAEKKHHAELSEQEQKHIAGLMRINHTGEVCAQALYQGQALTAKLPEIREEMEQAAQEEIDHLVWCEERLNQLGSRTSLLNPIFYAASFSMGAAAGLVGDKWSLGFVAATEEQVCKHLSDHLQQLPEQDEKSRAILEQMLEDEAEHGSNALAAGGHEFSAPVKKLMTAMSKVMTQTTYRM
>NZ_CP019343.1|WP_085757661.1|1140261_1141551_+|phosphoribosylamine--glycine-ligase
MNVLVIGSGGREHALAWKAAQSPDVETVFVAPGNAGTAIEPGCTNIAIDTMDFAALAAFATDNGVGLTIVGPEAPLVEGVVDFFAEKNLRCFGPSKGASQLEGSKSFTKDFLARHNIPSAFYQTFTEIDPALAYIKEKGAPIVVKADGLAAGKGVIVAMTEAEAEAAVRDMLAGNAFGEAGHRVVIEGFLEGEEASFIVMVDGKNILPMATSQDHKRAEDGDQGPNTGGMGAYSPAPVVTDEVYQRIMSEVIEPTVAGMAAEGNDYTGFLYAGLMISSDGAPQVIEYNCRFGDPETQPIMMRLQGDLVAMCNAALDSKLDTVSAQWDSRCAVGVVLAAGGYPASYGKGAVISGLDAAAEVSDSKVFHAGTALDNGEVVTSGGRVLCATALGNTVTEAQQQAYQQVKAINWDNVYYRNDIAYRAIEREQG
>NZ_CP019343.1|WP_085757660.1|1138665_1140243_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MSNDQNLLPIKRALISVSDKSGIVEFAQALQAQGVEILSTGGTYKLLCDNNIDAVEVSEYTGFPEMMDGRVKTLHPKVHGGILARRGQDDAVMAEHGINAIDMVVVNLYPFEKTVANPDCSLEDAIENIDIGGPTMVRAAAKNNAFVNIVVNASDYDAILAEMKNNNGATSQATRFDLAIKAYEHTSAYDGAIANYFGHKVPGGNDNFPRTFNSQFTKTQDMRYGENSHQNSAFYIEKNPAAGSISTATQLQGKELSYNNIADTDAALECVKQFSEPACVIVKHANPCGVAIAADIKTAYDLAFETDTESAFGGIIAFNRELDAATAEAICERQFVEVIIAPTVSKEAVDIVTAKKNVRLLECGQWGDAVADFDFKRVNGGLLVQDRDMGVITEADLKIVTKRQPTEAEIRDLLFTWKVAKFVKSNAIIYGNDGRTIGVGAGQMSRVNSARIAGIKAEHAGLEVKGSVMASDAFFPFSDGIENAAAAGISCVIQPGGSIRDDEVIAAADNANMAMVFTGMRHFRH
>NZ_CP019343.1|WP_085760476.1|1138263_1138563_+|DNA-binding-transcriptional-regulator-Fis
MVSDFDQTEQDVQKQHLTNAPVAQAQTLRDSVSIALNNYFAHLEGQDVTDVYEMVLSEVEAPLLEEVMKYTRNNQTKASILLGLNRGTLRKKLKQYGLL
>NZ_CP019343.1|WP_085757659.1|1137139_1138216_+|tRNA-dihydrouridine-synthase-DusB
MFQIGPYVLASRVVLAPMAGVTDLPFRQLCRRFGAGLVVSEMVTSDTRLWNTRKSQYRLNHDGEAEPRSVQIAGGDALMMAEAAKLNVERGAQIIDINMGCPAKKVCKKAAGSALLKDQALVTEILQAVVNAVDVPVTLKIRTGWSPEQRNGLDIARIAEDSGIAALAVHGRTRACRFNGEAEYDTIARIKAAVDIPVIANGDIDSPEKALQVMQYTGADAVMVGRAAQGRPWLCREIDQFISNGDVIESPGTAEIKGILLEHLNALHHFYGEFMGVKIARKHVGWYLQATSQQDEANTANNSAEFRKHFNQLDSASLQSDAIENYFQQILEYDNTINDQGRIHSERPETINKEVIAA
>NZ_CP019343.1|WP_085757658.1|1135208_1136852_+|zinc-ribbon-domain-containing-protein
MTSQVTQCPNCNTSFRVTEVQLSVANGMVRCGSCLHIFNAADHWLINPAMDQDQGQPHGEEPTELPVSPEEPGDDELINDTFDNTLEQPSLAEDSLSLDSVLDDEPEPDHRPALEPEPNAELASDLDADLDASLDNIFDGDLFADDDLDLLADEVLESHEQAEQALDPSQPENLAEEPLPEQEAAPFAMSSEFEELDSDEILLDESELESDATTHTIINTDNDLDELIQDDEEISDSDFSDSFLELDQEEESALAVFKELDDIGEDNGLEEEDWARKLLEEEVEEHQPVAEAAAEPETEEPIEEPRDEFTDLFESLEDDETPLDPGLLDILNERNDDSAPQPIQEDEFVISDEAIVAGDRIGFDKSDLLANIEPEPVELDIASRRNLWIKRTWLASIVLATLLLAVQHIAFNYDRLARDNSYRPVFSSLCSVFGCEVPALHDISQIRSSNLMVRSHPELKHALVVDAIIINRAEFKQQFPVMELQFTDINGSVVAGRRFKPSEYLAGELAGTRIMPTKQPIHISLEIVDPGEQAVNYQLRFYPKQGS
>NZ_CP019343.1|WP_085757657.1|1133941_1134838_+|50S-ribosomal-protein-L11-methyltransferase
MSWLQLRVDTSRETTEAIEDALLAAGAVSVTMEDSADQPILEPAVGETPLWNQTRVTGLFNADTDTDQATVIATASFGNHLPPYRWEILEDKDWEREWMENFHPMRFGQRLWICPSWKQPPQADAVNLMLDPGLAFGTGTHPTTALCLEWLDGCDLQGKTVIDYGCGSGILGIAALLLGAKEVVAIDNDPQALIATMDNAKRNQIDSSKISVYLPEDAPSDYQADVMLANILAGPLAELAPLLNQLTLNQGLLVLSGLIHSQSAELLKIYGQWFAMDEPALQDEWVRLSGKKQDKYPG
>NZ_CP019343.1|WP_085757656.1|1132535_1133879_+|acetyl-CoA-carboxylase-biotin-carboxylase-subunit
MLEKIVIANRGEIALRILRACKEMGIKTVAVHSQADRDLMHVRLADESVCIGPAPSPLSYLNIPAIISAAEVTDSVGVHPGYGFLAENADFAEQVQKSGFAFIGPSADTIRLMGDKVSAIEAMRKAGVPTVPGSNGPLPVDNKERCLQIARDIGYPVIIKAAAGGGGRGMRTVQSEAALLNSIHVTRGEAAAAFGDGTVYMEKFLENPRHVEIQVMGDGQGNAVHFYDRDCSLQRRHQKVLEEAPAPGIPDDIREGVYSACVNACIEIGYRGAGTFEFLYEDGAFYFIEMNTRIQVEHPVTEMVTNFDLIKEQIRVCSGEKLSVKQEDIKLSGHAFECRINAEDPKTFMPCPGTVKIYHPPGGLGVRVDSHLYSGYSVPPNYDSMIAKVITWAEDRTTALDRMRSALDEMVIDGIRTNIPLQQDLVRDGPFREGGTNIHYLEKKLGL
>NZ_CP019343.1|WP_085757665.1|1145798_1146458_-|recombinase-family-protein
MTKYVAYYRVSTDKQGADGLGMEAQRRDIDLFMVNYAGGDSEIIAEFVEVASGKDDHNRPELQEAITLAKRHKAEVLVAKLDRLSRDVEFIAGMIKRVPFKVACMPDADVLQLQIYAVLAEQERRFVSQRTKAALAAAKERGVKLGGQRPNNQRANKETKRLAALRAEKLRPILAKLAVAGDSYREMARTLNDMDLRTERNAEFTHVQVRRMCSRLGLA
>NZ_CP019343.1|WP_085757666.1|1147829_1148837_+|hypothetical-protein
MIDSSPLRAEVKAKTEEIVLKLNEYLRGENVTEIKPILERVGRGGQLPHWYDLLESGQSMPNLDGKTIGSVIEMTLLGVLEKHTLQKFKIPPLEVNPAKGVDIPLLDLGVKSPSENFCTSEPFFSAYERVLGNESDALILLTDYQTAKKNPPPVRIQIIKTAYLKGSEIADKNLCLVARRNREQLYHESEALCKKMFQFLCHLNQQDWRAKALLSLVKILYNSDEDINEQIDTLSANFEERCNTAIENNSEPLSQDELNRILAIKDANPKVPAIINACSDWVIDNHKDFARLPNDNEWQRFLRSDLDGKIGLSFALQWRYNFGSLFRSLPMIDQG
>NZ_CP019343.1|WP_085757667.1|1149078_1150785_-|mechanosensitive-ion-channel-family-protein
MTPILSRLFSRMLATLFIGLLLSPLTLSAQANPAPKVAAAELVEPELEINPLVTEADELRKLIDIKVSETQQLLKEQSQTTAEDYDAYGRRIASRQLAILDEMDNLCSNILEQEQQNLETAEIRKYAGKLLDAAGEKLIAYIDLVEASQESAADPMQKPGSHIPLDRLYQSLGKQITLRESLGMDVTRQKEDLSRRVITRAERLSGRIEISKESEQAITKKVSAEPTNKEHQLALLDIQEKVAKQAKSLSVTITIMNTLEMDSSAYQRLLIKSTGDITTGILDKGVVTGLFAEWFDEAQTTIRENGAVIIFKLFIFSLVIFIFKMLANIVGKLVERSVSTSSLQLSNLLQDMIISSASRIVLITGVLIALSQVGFSLGPLLAGLGVAGFIVGFALQDTLGNFASGMMILIYRPFDNGDLIETGGVLGTVASMNLVSTTLLTIDNQTMIIPNNKIWGDVIKNITNQRHRRVDMVFGIGYGDDIEKTEKVLHDIVTSHDKVLPLPETTIRLHKLNDSSVDFIVRPWVNTADYWDVYWDITREVKMRFDREGISIPFPQRDVHLYQESTNT
>NZ_CP019343.1|WP_085757668.1|1151224_1152274_+|EF-P-beta-lysylation-protein-EpmB
MTTHPSVINPAQLPTPESWQQALANVVRQPEELFDLLQLDKSSLPAALAASQDFALRVPRAFVARMKTGCADDPLLKQVLPLGAELDYQPGFSEDPLGEMDCNPVPGLIHKYHGRVLLIVSGGCAINCRYCFRRHFPYSDNNPGRSERQQMLDYIRSDSSIHEVILSGGDPLAASDILLAELVEELAAIPHLTTLRVHSRMPVVIPQRITSQCLQWLTATRLNTVMVVHCNHANEIDQTVQDSLHRLKYAGITVLNQTVLLAGINDNADSLAELSERLFAAGALPYYLHTLDKVQGAGHFQVPEEVGQQLITALLARLPGYLVPKLVKEMAGARSKVPVSYGVSLADRP
>NZ_CP019343.1|WP_085757669.1|1152465_1154265_+|hypothetical-protein
MSSENTIRLKVPRQELEKSSFFADSGAAVDLWVANLPMANLGQSTRQLYQALAELNRVRMLPNKRFEILEKLRTSIYFVSKSLTRHYINQPIVLPEQPRKVAILAHTLHQQLATGYTIVATHTAALGKRAGFSKPESLIAQALHRAITDHTINMQRHYQLYEPINKRVWNDLHQFYALARQQHILDTAITDTEFGDSSVENCYKRALLIGCCKPNQLRQEDLLGIFKPLTEWASLCPLGPTSNDGLFIIDPTADKPPVYRELFESALEPEWLSLDTQPLAQHLKKLREDAKPDSLKADAGSYQVSIDLLGHLILAWDAMSKRTFMRLEANDELELCVGLSATHHFVSGELSFESLVEERGAKTFTMQAENPFMKVQAQQHRNKDVWDSPYEANMGQTSVSLESIEFHIRDNEQQNKDNAQKYRSHSVQMLNSSAHGYCVEWPPEAEAFIKTGEIVGIKEANSHNWSIAVIRWVKHGEDKQTQMGLELISPSAAPYGARIVRKTGAAAEYMRVLVLPEVAVSKQPITLLTPRVPFKTGFKVVLNQRGKEVQATLTKKLNETGAYNQFEFKRLGTPVSDEQVKTDNDDLAGDDFDSLWGNL
>NZ_CP019343.1|WP_085757670.1|1154383_1156468_+|EAL-domain-containing-protein
MARKSTIKLLLINESDNEGERLISLFRNAGRVARAQRASSAEDLHSLLEQENWDLLIANDKHPEIAVEQCLEHLKKQQSDIPCLIIRDSNADAALEAGASDVVSSDDDQRLIFAAFRELRHLETYRELYATKEKLSDAEERSEMLMSKSQDAIAYLSDGMLISSNPLFCQRFGYDDPDDLDCAPIIDLIDAGDQESFKNLLKTQISNGEGSTDFNFTGINQAGEGFSAAMRLNNAVFDEEPCIQLTIKEQGAESNSSSGGNPDIDPATGLYSYQYFLSQLETANQQATAGTQVSTLLYLGLDKFTSIRSRYGITHAYNILLDLAEFIQAKSDEANCLAHYCDDSFTLLMPNTGTEKAKQYALDLCQQISEHIVEVDGQSIQCTVSVGLVAIDGKSQQEANQLIDNAFSASEKLREDADNEGVGNGAELYIHVREKKALGDANGDDELDAFIQEAIEDERFTLTFQPVVSLRGTSGDHYEVRTTMTSDEGEALGPNQFLGNINFSSINTRLDRWILLEATKKLSAHTENGHDTRVIINLTNNALQDETLIPWLSVALKAGGIPPQALIFQFLEADITDFLKPAKTFAEAVKDLGCKISITNFGKVDEPFKALNHVGADYAKIASELTEALQSGGDTQEIKSMVTTINESSTQAIISGVENAAALAHLWQIGVDYIQGGYLAGQSGEMDYEFTDIA
>NZ_CP019343.1|WP_085757671.1|1156503_1157715_-|phosphoserine-phosphatase-SerB
MKEIILINVAGDDKPGLTSSVTEILAGYDVNILDIGQAVIHDTLSLGILVEVPATAESSPVLKDILFRTHELGLSVRFSPIDEQSYGHWVQGQGKPRHIVTLLARMITAEHLSAVTAVVANNQLNIDRIDRLSGRVPLDTVQDQTKACIEFSVRGEVADSPAFRSQLMELTSRFDIDIAFQEDNMFRRNRRLVVFDMDSTLIEAEVIDELAKAAGVGDQVAEITERAMAGELDFTESFSARVALLKGLDESVLAKIAETLPVTEGAEKLVSNLKRLGYKTAILSGGFNYFGEYLQRKLDIDYVYANDLEIVDGKVTGNVTGQVVDGARKAELLKSIAQQENISLEQSIAVGDGANDLPMLSIAGLGIAFRAKPIVKESAKQSISTLGLDGILYLLGIGDRHSA
>NZ_CP019343.1|WP_157117864.1|1157879_1159130_+|hypothetical-protein
MLNKLISKFLHLSIARKIAWLCAICSLLASLTLMMASHHGDRQLIERSSQLFGDSLAQQLARDASNPLVQGDKLSLQSIVNKLVASPIVLRGAIYDVENRPIAEAGEQQADGQSLSASITFQDSIAGYAVITLDAKPLLQQAANTRWQLAFLALLLSAFCYLLALIPARRLTAVLLDLAAITRLPKSRRDSNTGIDYPGQDELQQLAAIILAMPAPPEPGKVTISSSLSPAILAIEIVNLKALQQDPNTQQLSQGLAKLKQQLEMICKLYEGELQVNRSNGFSIHFKPTDDENNYPFRALCSGYLIVQWMQDQDLFTLHAGLALDGKSGKHSSEIDKDLALQATTEQALDIAIEGKLVINSTIYNHASVGNRVQSSISNHTEKVSKNSSRIVETLLEPYGALLERQLETLKAQVNP
>NZ_CP019343.1|WP_085757673.1|1159119_1161393_-|DNA-topoisomerase-IV-subunit-A
MSDQFNIADDGVEQISLKSYTEKAYLDYSMYVILDRALPNIADGLKPVQRRIVYAMSELGLKAAAKYKKSARTVGDVIGKFHPHGDSSVYEAMVLMAQDFSYRYPLVDGQGNWGSSDDPKSFAAMRYTESKLSPFSELLLSELGQGTVDWQPNFDGTLDEPQVMPSRVPTVLLNGTTGIAVGMATDIPPHNMREVVNACIHILENPKATLEDLSAYIPGPDYPTEAEIITPLADIQNLYQTGKGSIRMRALWQKEGTDVVVTALPHQVSGSKVLEQIAQQIHAKKLPMVADLRDESDHENPTRLVIIPRSNRVDIEPMMNHLFASTDLERTYRVNLNMIGIDGRPEVKSLDKILKEWLQFRTETTKRRLQYRLQKVEERLMRLAALMIVYLNVDEVIRIIREEEKPKQVLMERFDLVEMQAEYILETKLRQLARLEEMKIREEEEALEKEKEDLEKVIDSPRRLKTLVKKELMEAAEQYGDDRRSPIVSRDDAKAFSEEELMTTEPVTVVLSAKGWIRSAKGHDMDPASLNYKSGDGFHLAARGKSNQSAVVLDSGGKAYTVAAHSLPSARGQGEPLTGRINSPSGASFEGLMMGSADDLYLLASDAGYGFVVKVSDLQTKNKAGKAALTVPKGGQVIQPARVGGSSVEDAFVVAVSNEGRMLLFPLTDLPIMGRGKGNKIIGIPTSRLQAREEYMVSVNIIREKDTLRVFAGKRHVNMKFKELDHYIGERGRRGHKLPRGFQKVDSVEVVSPEAKD
>NZ_CP019343.1|WP_085757674.1|1161655_1161904_+|hypothetical-protein
MQSTDNVVQLDNFKRDNQQEIVDDIGAKAFLFLRDAAEEMGVPVKQVITEHMLGLALVMSAVEGTAEAKATLRKIEAQLGSA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019343_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019343_4

1374604-1374953

Orphan

Consensus_repeat	Method
GCTTTCTTTCTAACCGGTAGGGTGGATTATAATCCACCGGTATAGGCTAGGCTTGGTGGATTG	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP019343_4

>merge|NZ_CP019343|4|1374604-1374953|PILER-CR
CTTTCTTTCTAACCGGTAGGGTGGATTATAATCCACCGGTATAGGCTAGGCTTGGTGGATTGTAATCCACCCTACGATGGTGGTATCTCGTTTACGCTTTCTTTCTAACCGGTAGGGTGGATTATAATCCACCGGTATAGGCTAGGCTTGGTGGATTGCAATCCACCCTACGATGGTGGTATCTCGTTTACGCTTTCTTTCTAACCTGTAGGGTGGATTATAATCCACCGGTATAGGCTAGGCTTGGTGGATTGCAATCCACCCTACGATAGTGGTATCTCGTTTACGCTTTCTTTCTAACCTGTAGGGTGGATTATAATCCACCGGTATAGGCTAGGCTTGGTGGATTG

>NZ_CP019343|4|2|1374604-1374953|PILER-CR
CTTTCTTTCTAACCGGTAGGGTGGATTATAATCCACCGGTATAGGCTAGGCTTGGTGGATTGT	AATCCACCCTACGATGGTGGTATCTCGTTTACG
CTTTCTTTCTAACCGGTAGGGTGGATTATAATCCACCGGTATAGGCTAGGCTTGGTGGATTGC	AATCCACCCTACGATGGTGGTATCTCGTTTACG
CTTTCTTTCTAACCTGTAGGGTGGATTATAATCCACCGGTATAGGCTAGGCTTGGTGGATTGC	AATCCACCCTACGATAGTGGTATCTCGTTTACG
CTTTCTTTCTAACCTGTAGGGTGGATTATAATCCACCGGTATAGGCTAGGCTTGGTGGATTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019343.1\|WP_085757867.1\|1383231_1384071_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224041
NZ_CP019343.1\|WP_085757853.1\|1368861_1370010_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NZ_CP019343.1\|WP_085757866.1\|1382211_1383210_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
NZ_CP019343.1\|WP_085757850.1\|1366103_1366841_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176523
NZ_CP019343.1\|WP_085757868.1\|1384127_1385372_+\|alginate-export-family-protein	unknown	unknown	gnl\|CDD\|372583
NZ_CP019343.1\|WP_085757861.1\|1376383_1377544_-\|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|341473
NZ_CP019343.1\|WP_157117875.1\|1372111_1372825_-\|UPF0149-family-protein	unknown	unknown	gnl\|CDD\|236680
NZ_CP019343.1\|WP_085757852.1\|1368224_1368836_-\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|224766
NZ_CP019343.1\|WP_157117876.1\|1373743_1374562_+\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|223740
NZ_CP019343.1\|WP_157117874.1\|1371773_1371950_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085757860.1\|1375869_1376208_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_CP019343.1\|WP_085757865.1\|1380789_1382196_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|372585
NZ_CP019343.1\|WP_085757855.1\|1370499_1371591_-\|PilZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP019343.1\|WP_085757851.1\|1367033_1368200_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP019343.1\|WP_085757864.1\|1379630_1380470_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085757857.1\|1372990_1373626_-\|riboflavin-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183846
NZ_CP019343.1\|WP_085757863.1\|1378318_1379527_+\|L-2-hydroxyglutarate-oxidase	unknown	unknown	gnl\|CDD\|183292
NZ_CP019343.1\|WP_085757854.1\|1370075_1370282_-\|YdcH-family-protein	unknown	unknown	gnl\|CDD\|377305
NZ_CP019343.1\|WP_169713925.1\|1377667_1378174_-\|DUF4124-domain-containing-protein	unknown	unknown	gnl\|CDD\|379230
NZ_CP019343.1\|WP_085757859.1\|1375437_1375644_+\|DUF1289-domain-containing-protein	unknown	unknown	gnl\|CDD\|377738

Protein	Function_ID	Function_description	E-value
NZ_CP019343.1\|WP_085757867.1\|1383231_1384071_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	9.20686e-128
NZ_CP019343.1\|WP_085757853.1\|1368861_1370010_-\|HD-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	2.32173e-28
NZ_CP019343.1\|WP_085757866.1\|1382211_1383210_+\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	2.86842e-51
NZ_CP019343.1\|WP_085757850.1\|1366103_1366841_+\|hypothetical-protein	gnl\|CDD\|176523	cd08581, GDPD_like_1, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.	6.46576e-66
NZ_CP019343.1\|WP_085757868.1\|1384127_1385372_+\|alginate-export-family-protein	gnl\|CDD\|372583	pfam13372, Alginate_exp, Alginate export. This domain forms an 18-stranded beta-barrel pore which is likely to act as an alginate export channel.	4.0658e-07
NZ_CP019343.1\|WP_157117875.1\|1372111_1372825_-\|UPF0149-family-protein	gnl\|CDD\|236680	PRK10396, PRK10396, hypothetical protein; Provisional.	3.84073e-16
NZ_CP019343.1\|WP_085757852.1\|1368224_1368836_-\|flavin-reductase-family-protein	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	7.77693e-29
NZ_CP019343.1\|WP_157117876.1\|1373743_1374562_+\|mechanosensitive-ion-channel	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	2.58757e-38
NZ_CP019343.1\|WP_085757861.1\|1376383_1377544_-\|iron-containing-alcohol-dehydrogenase	gnl\|CDD\|341473	cd08194, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like. This family contains iron-containing alcohol dehydrogenase (Fe-ADH) most of which have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. It is distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.	0
NZ_CP019343.1\|WP_085757860.1\|1375869_1376208_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	1.95504e-08
NZ_CP019343.1\|WP_085757865.1\|1380789_1382196_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|372585	pfam13379, NMT1_2, NMT1-like family. This family is closely related to the pfam09084 family.	6.19842e-117
NZ_CP019343.1\|WP_085757855.1\|1370499_1371591_-\|PilZ-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	1.62055e-68
NZ_CP019343.1\|WP_085757851.1\|1367033_1368200_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	3.02834e-60
NZ_CP019343.1\|WP_085757857.1\|1372990_1373626_-\|riboflavin-synthase-subunit-alpha	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.55058e-101
NZ_CP019343.1\|WP_085757863.1\|1378318_1379527_+\|L-2-hydroxyglutarate-oxidase	gnl\|CDD\|183292	PRK11728, PRK11728, L-2-hydroxyglutarate oxidase.	0
NZ_CP019343.1\|WP_085757854.1\|1370075_1370282_-\|YdcH-family-protein	gnl\|CDD\|377305	pfam04325, DUF465, Protein of unknown function (DUF465). Family members are found in small bacterial proteins, and also in the heavy chains of eukaryotic myosin and kinesin, C terminal of the motor domain (Myosin pfam00063, Kinesin pfam00225). Members of this family may form coiled coil structures.	2.99251e-06
NZ_CP019343.1\|WP_169713925.1\|1377667_1378174_-\|DUF4124-domain-containing-protein	gnl\|CDD\|379230	pfam13511, DUF4124, Domain of unknown function (DUF4124). This presumed domain is found in a variety of bacterial proteins. It is found associated at the N-terminus associated with other domains such as the SLT domain and glutaredoxin domains in some proteins. The function of this domain is unknown, but it may have an Ig-like fold.	3.94362e-06
NZ_CP019343.1\|WP_085757859.1\|1375437_1375644_+\|DUF1289-domain-containing-protein	gnl\|CDD\|377738	pfam06945, DUF1289, Protein of unknown function (DUF1289). This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N-terminus. The function of this family is unknown. Structural modelling suggests this domain may bind nucleic acids.	1.5304e-14

>NZ_CP019343.1|WP_157117876.1|1373743_1374562_+|mechanosensitive-ion-channel
MDEELRQITAIYDMAVEFFVNYSFQLVGAVLILIIGFWLGGRIAALVLRLCERHSLDATLAGFFANTAKLLVIAIMSIIAMGKLGISIGPFVAALGAVSLGAGLAIQSPLSNYGAGLNIILTRPFVVGDTIKVQAVTGIVKEIRLAYTLLTNEDGVEIIIPNKHIIGEVIHNSHEDTLIELEVGISYHADPDQAIAAVKQALQHLDISTSRNQPEIGIDNFADSNVTLAVRLWAPTISHYQIRYQANSAIYTALKNANIEIAFPQREIKMLP
>NZ_CP019343.1|WP_085757857.1|1372990_1373626_-|riboflavin-synthase-subunit-alpha
MFTGIVQGSFPLLKVERKPGLHSFTIELPAPLREDLAIGASVAVDGVCLTVTAIEQAKVYFDIMQQTLSLTTLGELNSGDVVNIERSAKQGVEIGGHVISGHVDNTAEVVAIEQPENNRFITYRAPAEKMKYIFEKGFVGLNGCSLTVAAVDRDEHTLTVCYIPETLRVTTHGAKVIGDKINFEIDRQTQAIVDTVENFLVANPEMTNQGR
>NZ_CP019343.1|WP_157117875.1|1372111_1372825_-|UPF0149-family-protein
MRTVEFTHFDKEQEQSLRERLARLHSHEAVLSYPQLQGFLFALACSPETIRPSEWFDLIWLNDEPQFDNEQEARSFYRQVVALSEHIADMARQRRFLPFSARYSELWQQELSQWCEGLLMGHHYLEDLWMIAIDDLNDQTVIENVDTALSLASTFADVINAQQLSFEEGMELTDDHLPEAYDLFWKVLGTYASVARLWAEGAWDFDAEQLFLALEPVGHEEACPCGSGEVFSKCCLH
>NZ_CP019343.1|WP_157117874.1|1371773_1371950_+|hypothetical-protein
MVQVRAEVGRSFRGTLFAIHGRSSAAIPAADGPGKTYPPQLWHHVYAFFLVFWASESI
>NZ_CP019343.1|WP_085757855.1|1370499_1371591_-|PilZ-domain-containing-protein
MLKKGSNYKELAESICSEVQSCLPTQFERSAAKKVLLGKIEKLLLASDINDAAPESRSVTILLSDIRGFTALAETFSALTVMELLNRYFSRMTEVIVQHGGTIDKLMGDSIMVLFGAPQSGVDDVERAIACAVEMQRAMSEFNEQNLALGLPEMFMGIGINTGQVMAGSLGSDHHREYTVIGDEVNLTSRIEAQSLRGQILISENTYRMAKSFVLVGEPNKVRVKGKKEAVHLYDLMGTTRPRAMTVPRREIRKSPRVAIHMPCFFHRLVGKQVDSKEFQGEVVDLGYNGLLMVSPIMLEPFSEIKMQVSLQLLGTGTTDIYARVVKVDQGENGVLCSLEFTSMDTAGQQTIKQFVDNQLYQS
>NZ_CP019343.1|WP_085757854.1|1370075_1370282_-|YdcH-family-protein
MENSEIPSLGSQLLALRTEHRMLDVEILRLQEFPYIDQLQLQRLKRQKLRLKQNIERIKAMMIPDLDA
>NZ_CP019343.1|WP_085757853.1|1368861_1370010_-|HD-domain-containing-protein
MGVFQCDDIDLAVVRELIDDINNHYQISEQALLMLDRQPDDTELLLSLFRSVHTIKGDLSIVGFAPAMPLMNAVEDLSSLLREGRVHYTPLISDLVLLVLDRVRSFVDSFKAHGFVEYDQQEVQQLGDSMAAIAADISRGGLQSGQEAKIAELIRRLDPSVVIEEHQPGYGSRLQEDEFLRELGLDRDHDLDFFRDLMEPVEKRSQYWQGRSDRILKMALILNQLGGSPVDERQMAAAVYCHDFGMAFMPLDLLHKEGTLENSEILLLRSHVQSSAHLLQFMEQWQPAKEIVLQHHEAANGSGYPYGLREKEICDGAKILAIADTFDALTHLRAYSAHQKRPIIRAVKEINDCAGKQLSAHWVDIFNRAVQPVLLAHRARQL
>NZ_CP019343.1|WP_085757852.1|1368224_1368836_-|flavin-reductase-family-protein
MHFDLSELSPSRVYYTMIQTLVPRPVAWVLSDNGNDSFNLAPFSYFNGVASDPPLIMLSVGKKPDGSLKDTRNNIIERSEFVIHIAHREMAPQVTETSRVLAAGESELDSTGLETVAFGDFRLPRLKDCRVALACERYRVEDITPTQAMILGEVKAIYVDDAVITEDEKGRAKIHADKIDPITRLGGDEYGLFGGIINVPRPK
>NZ_CP019343.1|WP_085757851.1|1367033_1368200_+|GGDEF-domain-containing-protein
MSIKNSVLFLPLDYFALPPFEGDSLQLSRARALVGANLFIALLMIIGVLFIYAADSLGDMGNLFIWSLIVPGFIVNGLVPFTLRRTGWLSLCQHVTLLITFAAIVIGICTSGGPVLASNNQLMVMQAALSLFLLGIRGGLIWSAIVLLTQSFLYYLFVSGVDFPNIQPPEAATAGAIFNWFLAFCAIVSLILLIELSRDQLEFQRNNEQEKLRYMATHDGLTKLANRSLFEERLKAAIDQSESNDSKVLLLYLDLDKFKPINDEWGHDMGDRVLKIVAARLKATTRECDTVARLGGDEFAVVLPNLVKDISVNKLTESIYDRITQPINLHGKHFNIGCSIGICSYPESANSSEQLWQQADAAMYIAKKKSARWHIHNISDMKIADFRS
>NZ_CP019343.1|WP_085757850.1|1366103_1366841_+|hypothetical-protein
MHDLLIAHRGWQRRYPENTLLGIEQALLLGARHIEIDIQLTADAVPVLCHDQTLERLSASPLNINHCLYTDLAEHSAYEPQRLGDQFLGTPLSTLAECLTLLADYPETTLYIELKVESAKTFGADCIFEAIHPLIQHCANPYAVISFSLELLQLFQQRGGHRVVPVLSSWQQAFSEEVQILNPPLIFCDIHLIPEDSTPADLPYPSAFYEVDRPELAQQLLSEGAALIETFAIGEMLNAESTANT
>NZ_CP019343.1|WP_085757859.1|1375437_1375644_+|DUF1289-domain-containing-protein
MSINAVLIEETTQDNNPCVRNCCLDDTKVCMGCGRSLAEILEWHNADSPRQQQISQRAKQRMGQRPGF
>NZ_CP019343.1|WP_085757860.1|1375869_1376208_-|nuclear-transport-factor-2-family-protein
MKAGRNQQVIRRLIDAVSDNDKDRILSFFSDDSVYHHPQGSKAIGQEAIWHIIAGVEDQVEQVDWQLDHLQETEAGSVLTEGRVRHLINGDWREFAVKGEFEIRGSKVTQWH
>NZ_CP019343.1|WP_085757861.1|1376383_1377544_-|iron-containing-alcohol-dehydrogenase
MVASSIYLPNILRIGAGASGQLAEVLAELGASRPMLVTDPFMQQCGYVDRIVQCLKDGAIEHGVFADCVPDPTTDSVAAAVRYWQQGDFDAVVALGGGSSIDTAKAVAVLAIHGGAMRDYKAPNPVPVGAPIIAIPTTAGTGSEATRVTVVTDTETQEKMMCLGVGLMPSAALVDFELTMSMPYRLTADTGIDSLCHAMEAYVSRKANTFTDSIALASMSAIARHIRSACDEPDNRAAREAMMLAATQGGMAFSNASVTLIHGMSRPLGAFFHVPHGLSNAMLMPQLTEFSLPGATQRYADCARAMGLASAADSDKAAGIALLDGLYQLNADLSVPSPQAYGIDNSRYMSVISTMAQQALASGSPNNNPLIPDQQQIEALYSSVWQ
>NZ_CP019343.1|WP_169713925.1|1377667_1378174_-|DUF4124-domain-containing-protein
MDLLLTIHRRCYQNICQRVIVYCALLLMPAMAVADIYQCVDSHGRPSFSHTPCAVESVTGDSAAHVLWRDMQVLVNTGKDNAVSQGADMQSIIDCKNREQAFAKTLDAIDQRLAQLSSVEHKYLFAAQKSLRQCGACGSSAMTHCKRADKSLEKEMIALMPQLKASSR
>NZ_CP019343.1|WP_085757863.1|1378318_1379527_+|L-2-hydroxyglutarate-oxidase
MPNTLYDYTIIGGGIVGVSVAWQLKQRLPHASILLIDKESQLAQHQTGHNSGVIHAGVYYAPGSLKAELCKKGAAATLAFCRQYGIAVKQPGKLLVACNALELQRMQALQQRCQKNGIGVTALNQQQLKQQEPNITGLGALLVEDSGIVDYSQITKTMARLFQQQGGHVQLNTQLQAAVENRDNISLTTNRGAITSRYVIACAGLAADRVARLLNLAIDFSIVPFRGEYYQLSPENHDLIQRLIYPIPDPALPFLGVHLTPMINGGISVGPNAVLGWKREGYGRINFKLKDAIDMLRFPGFWKLCRSQYQSGISEYKNSLYKRGYLKQIQKYCPQLTLQDLEPYPSGIRAQAVLADGSLVQDFLFAESARSLHVCNAPSPAATSAIPIGDYICQRLQEKTSV
>NZ_CP019343.1|WP_085757864.1|1379630_1380470_+|hypothetical-protein
MHLIEPQTSQSEALSTTFKQLQQGLTTLKLLCQLTQLLQHHRGSSMAYLSGSQDFLPQIEKLQLSIETALQLINELNHSYYRCIPEDLLNNINNDWKTIAMGWQQDQVMPNFEFHSHLVDSCNKLLRLCMVEQLRPLMLQGNSRHQNLLELIFITFPNSIENLAMLRGLSTNVAVIKACGTESHAKISFLIKEIEQQNKVLLGDIITIKSDIDLIKNYQKPLHKFLLTVKLSILESPDITADSSQLFKMSTDIINTQWNAVGQGMQRIEDSLYRLLISA
>NZ_CP019343.1|WP_085757865.1|1380789_1382196_+|ABC-transporter-substrate-binding-protein
MIFNQQKSLRKTITRTMAAIATVAASSFFTLHSSANAEELGWPEKEELTFGFIKLTDMAPIAIAYENGYFEDEGLYVTIEAQANWKVLLDGVIDGRLDGAHMLAGQPIAATMGFGTKAHIITPFSMDLNGNGITVSNSVWEQMKPNIPKMADGRPVHPIKADALKPVVEQYKADGKPFNMGMVFPVSTHNYELRYWLAAGGIHPGYYAPHKGDNSGKIDADALLSVTPPPQMPATLEAGTIYGYCVGEPWNQQAVFKGIGVPVITDYEIWKNNPEKVFGITAEFAEKYPNTTIRLTRALIRAAQWLDENNNANRPAAVKILSQSNYVGADYDVIANSMTGTFEYEKGDKREIPDFNVFFRYNATYPYYSDAIWYLTQMRRWGQISEDKSDSWYIDMAKSVYRPDIYQKAAESLIAEKKVKATDFPNFAEETGFKPAQKDFIDNIEFDGSKPNAYIDSFAIGLKQGDLL
>NZ_CP019343.1|WP_085757866.1|1382211_1383210_+|ABC-transporter-permease
MNSSATVFSKLLPNQSSGFHYGKLINSALKNIGIPLLGIGLFLLLWAGAAQNIDTSLGKFPGPAAVTTQFAALYNEHSAEREKADKFYQRQENRNAERLAKDPGYQAKIRNYTGKETFLDQIVTSLITVSSGFLLAAFIAIPLGIAIGLSKTLNMAVNPIIQIFKPVSPLAWLPLVTMVVSALYISPEPMVAKSFLNSMITVTLCCIWPMVINTSVGVAGIDDDLVNVSRVLRLPALKHVQKIVLPAAIPMIFTGMRLSLSVAWMVLIAAEMLAQNPGLGKFVWDEFQNGSSESLSRIMAAVITIGFIGFLLDRLMLQLQRWVSWDKSSAQR
>NZ_CP019343.1|WP_085757867.1|1383231_1384071_+|ABC-transporter-ATP-binding-protein
MSVLLDISHIDMEFPTPDGCFKALDDVDLQINKGEFVSLIGHSGCGKSTVLNIVAGLYQATKGGVILNSKEVSEPGPERAVVFQNHSLLPWLSAYENVELAVKQVFKNSKSRQQTREWIEHNLKLVHMDHAMHKRPDEISGGMKQRVGIARALAMQPDVLLMDEPFGALDALTRAHMQDSLMEIQAELNNTVIMITHDVDEAVLLSDRIVMMTNGPAATIGEILAINLPRPRSRLALADNPEYNRLRSEVLKFLYEKQRKVEPLPSSKPANSKNTEQAA
>NZ_CP019343.1|WP_085757868.1|1384127_1385372_+|alginate-export-family-protein
MQARKSFLGHRPSLLLGASLLTISTFSPTALSDAIAEALSSGTAYGDFRMRFETVDQDNALDDADALTLRSRLGYTTGAVSGFSATIEFEDSRSVAGIDDYNDTIGNGTEYSVIADPETTELDQGFLHYKTDKLSSKLGRQVIKLDNTRFVGDVGWRQDRQTFDGLSFDYNPLEDLTVKYAYLEQRNRIFAEEKDIDSKDHLLNASYKTGLGTLTGYGYLLEEDTDTELAFDTFGIRFKGATDTGDIKLLYTAEFATQEKSSQGAEDLDADYIFLEGGAVISGFTAKLGYEVLGSDDGQFGFSTPLATLHAFNGWSDQFLNTPNEGLVDTYISVSGKLAGGKWVVAYHDFSADEDSDISDDFGDEINISYGKSFGKHYSAGIKYAAYSADDPANNGATGFVDTDKIWIWAGAKF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019343_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019343_5

1510905-1511089

Orphan

Consensus_repeat	Method
GGTGGATTNTAATCCACC	CRT

4 spacers

The CRISPR arrays of NZ_CP019343_5

>merge|NZ_CP019343|5|1510905-1511089|CRT
GGTGGATTATAATCCACCGATTGTGACGGCTTCTGCTGGGTTTGGTGGATTTTAATCCACCGGTTGTGATGACTTCTGCTGGGTTTGGTGGATTTTAATCCACCCTACAATGACCAATCGTAGGGTGGATTGTAATCCACCGGTTGTGACGGCTTCTGGATGGGTTTGGTGGATTTTAATCCACC

>NZ_CP019343|5|3|1510905-1511089|CRT
GGTGGATTATAATCCACC	GATTGTGACGGCTTCTGCTGGGTTT
GGTGGATTTTAATCCACC	GGTTGTGATGACTTCTGCTGGGTTT
GGTGGATTTTAATCCACC	CTACAATGACCAATCGTAG
GGTGGATTGTAATCCACC	GGTTGTGACGGCTTCTGGATGGGTTT
GGTGGATTTTAATCCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019343.1\|WP_085757977.1\|1517973_1519272_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP019343.1\|WP_085757973.1\|1512995_1514429_-\|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE	unknown	unknown	gnl\|CDD\|183085
NZ_CP019343.1\|WP_085757963.1\|1500789_1501179_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319923
NZ_CP019343.1\|WP_085757974.1\|1514603_1515221_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379276
NZ_CP019343.1\|WP_085757979.1\|1521630_1522191_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|376775
NZ_CP019343.1\|WP_085757975.1\|1516168_1517245_-\|terpene-cyclase/mutase-family-protein	unknown	unknown	gnl\|CDD\|238362
NZ_CP019343.1\|WP_085757972.1\|1512315_1512834_-\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP019343.1\|WP_085757969.1\|1508891_1510106_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223651
NZ_CP019343.1\|WP_085757965.1\|1503543_1504122_-\|esterase-YqiA	unknown	unknown	gnl\|CDD\|182945
NZ_CP019343.1\|WP_085757964.1\|1501312_1503196_-\|DNA-topoisomerase-IV-subunit-B	unknown	unknown	gnl\|CDD\|235501
NZ_CP019343.1\|WP_085757976.1\|1517241_1517958_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_CP019343.1\|WP_085757968.1\|1507498_1508776_-\|3-deoxy-D-manno-octulosonic-acid-transferase	unknown	unknown	gnl\|CDD\|235589
NZ_CP019343.1\|WP_085757978.1\|1519437_1521459_-\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|224011
NZ_CP019343.1\|WP_085757980.1\|1522187_1523108_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187543
NZ_CP019343.1\|WP_085757970.1\|1510102_1510897_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381321
NZ_CP019343.1\|WP_085757966.1\|1505247_1505715_-\|DUF1249-domain-containing-protein	unknown	unknown	gnl\|CDD\|377720
NZ_CP019343.1\|WP_085757971.1\|1511099_1512146_-\|alpha-amylase	unknown	unknown	unknown
NZ_CP019343.1\|WP_157117887.1\|1499348_1499948_+\|LysE-family-transporter	unknown	unknown	gnl\|CDD\|224198
NZ_CP019343.1\|WP_085757960.1\|1498896_1499280_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319923
NZ_CP019343.1\|WP_085757967.1\|1506000_1507425_+\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|236529

Protein	Function_ID	Function_description	E-value
NZ_CP019343.1\|WP_085757977.1\|1517973_1519272_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	6.17254e-65
NZ_CP019343.1\|WP_085757973.1\|1512995_1514429_-\|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE	gnl\|CDD\|183085	PRK11316, PRK11316, bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE.	0
NZ_CP019343.1\|WP_085757963.1\|1500789_1501179_+\|VOC-family-protein	gnl\|CDD\|319923	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	2.0962e-52
NZ_CP019343.1\|WP_085757974.1\|1514603_1515221_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379276	pfam13578, Methyltransf_24, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.04952e-18
NZ_CP019343.1\|WP_085757979.1\|1521630_1522191_-\|sugar-transferase	gnl\|CDD\|376775	pfam02397, Bac_transf, Bacterial sugar transferase. This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.	9.92054e-67
NZ_CP019343.1\|WP_085757975.1\|1516168_1517245_-\|terpene-cyclase/mutase-family-protein	gnl\|CDD\|238362	cd00688, ISOPREN_C2_like, This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.	1.24761e-08
NZ_CP019343.1\|WP_085757972.1\|1512315_1512834_-\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.66234e-29
NZ_CP019343.1\|WP_085757969.1\|1508891_1510106_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|223651	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	3.16713e-20
NZ_CP019343.1\|WP_085757965.1\|1503543_1504122_-\|esterase-YqiA	gnl\|CDD\|182945	PRK11071, PRK11071, esterase YqiA; Provisional.	1.52523e-76
NZ_CP019343.1\|WP_085757964.1\|1501312_1503196_-\|DNA-topoisomerase-IV-subunit-B	gnl\|CDD\|235501	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed.	0
NZ_CP019343.1\|WP_085757976.1\|1517241_1517958_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	3.87893e-23
NZ_CP019343.1\|WP_085757968.1\|1507498_1508776_-\|3-deoxy-D-manno-octulosonic-acid-transferase	gnl\|CDD\|235589	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.	0
NZ_CP019343.1\|WP_085757978.1\|1519437_1521459_-\|polysaccharide-biosynthesis-protein	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NZ_CP019343.1\|WP_085757980.1\|1522187_1523108_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187543	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.66785e-110
NZ_CP019343.1\|WP_085757970.1\|1510102_1510897_+\|aldo/keto-reductase	gnl\|CDD\|381321	cd19095, AKR_PA4992-like, Pseudomona aeruginosa PA4992 and similar proteins. Pseudomona aeruginosa PA4992 is the prototype of this family. It is a putative aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NAD(P)H as a hydride donor.	2.49415e-81
NZ_CP019343.1\|WP_085757966.1\|1505247_1505715_-\|DUF1249-domain-containing-protein	gnl\|CDD\|377720	pfam06853, DUF1249, Protein of unknown function (DUF1249). This family consists of several hypothetical bacterial proteins of around 150 residues in length. The function of this family is unknown.	1.65349e-44
NZ_CP019343.1\|WP_157117887.1\|1499348_1499948_+\|LysE-family-transporter	gnl\|CDD\|224198	COG1279, COG1279, Lysine efflux permease [General function prediction only].	3.7737e-63
NZ_CP019343.1\|WP_085757960.1\|1498896_1499280_+\|VOC-family-protein	gnl\|CDD\|319923	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.34267e-44
NZ_CP019343.1\|WP_085757967.1\|1506000_1507425_+\|TolC-family-outer-membrane-protein	gnl\|CDD\|236529	PRK09465, tolC, outer membrane channel protein; Reviewed.	3.54182e-121

>NZ_CP019343.1|WP_085757970.1|1510102_1510897_+|aldo/keto-reductase
MSESLITRPFGDTGIMVSPIGLGTVKLGRDQGVKYPNGFTIPDDKAASHLIDLARDLGINLIDTAPAYGISEQRLGPLLKGQRQDWVICSKVGEEFNEGDSSFDFSAKHTRFSIERSLKRLDTDFIDMVLVHSDGNDLNVIEQQEVLDELLRCKQEGLIRAYGVSTKTVAGGLRAAEKTDAVMATFNLDYKDEKPVIDFCEKNNKGLLIKKAFASGHICLAGEDPIQASMDFIFSHPGVSSAIVGTINPTHLTANVKAVIKATT
>NZ_CP019343.1|WP_085757969.1|1508891_1510106_+|FAD-dependent-oxidoreductase
MTTDTATVDIAIIGGGIAGLWLLNRLCNDGYNAILFEQGDLGGAQTIASQGMIHGGIKYALGGALTGASEAIADMPDHWRRCLEGKGDVDLQQAQVLSEHFYMWSTQSITSKVTSFFASKLTRGRVDDVSKAERPAVFQDNAFKGNLYKLVDLVLDVPSVVAALRDNYQGRIFSIDWQHSEFSQKADGSVDTLVASDGENSVTLSANQFVFTAGEGNEQLCSLLSINKPAMQRRPLKQVLVKHHYPHSLYAHCMGGNPSPRLTISSHATEDGKNVWYLGGDLATEGVALDDDALIEKAKDELNDLFPWLDFNGSEWAVLYVDRAEPKQKGLIKPDKAFAETAKSCSNVIISWPTKLTLAPNMTDEVCDILKQQNVSASHGEIPAAFNDFKKPAIGTPCWETLFK
>NZ_CP019343.1|WP_085757968.1|1507498_1508776_-|3-deoxy-D-manno-octulosonic-acid-transferase
MARYLYSLVFYLITPLILLRLWYRASKAPAYGQRIAERFGFFTAPKLTDTIWVHSVSVGETIAAAPLVKRLQQQHPHASIVVTTMTPTGSDRVKALFGDSVFHVYAPYDLPGAVQRFLKRIQPKLLVIMETELWPNTIHYCRQSSIPVVLANARLSEKSAAGYQRLSWLTGAMLNNLSKVVAQNQTDADRFLALGLPDDHVEVSGSIKFDVEIDNRLIAKAASLKDQWSQQGQRLILMAASTHQGEDEIILDAFKQVLNTLSDALLIIVPRHPERFDQVAGLCAGSFSTTRRSQSHTVDAQTQVLLGDTMGELLLLCGCADIVFVGGSLVDSGGHNMLEPAAWSLPLITGDSDFNFAEASRLLQQRSALLRVSDARMLAEKILMLGESEPLRQSMGTNARAVVDENRGALDRLLLAINALLKSIG
>NZ_CP019343.1|WP_085757967.1|1506000_1507425_+|TolC-family-outer-membrane-protein
MKCLIRPLSLAIALCAGSHLAQADTLADIYEQALLNDPKLKGAEASYRANIETEEQAFSSLLPQVNASGEYRESDTTDISSRSLDTIPPQDLESDDDTESDRTTLSLSLDQKLFDLSTWFTFQQGKELTKQASAQLAFDQQDVIVRVAEAYFDVLRALDNLEASRAEERATKRQLEQTQQRFDVGLIAITDVHEARAVYDSTVVTRLTDEGNLGTSYESLTVLTGQSHQNLWLLNKDYPVVDPDPMSRDEWVQFSLQNNNALKAAMFGMEAAKQNASSKKMGHAPTLTGNVTYTDYEEDGDNTSNINDAVRPFETESDGYVWSVRLSVPIYSGGGVSAQRRQAYEQYNVALQTKIETQRTVIRNARASHITVVTDVQRVKARQQAIVSTSSALDATEAGYEVGTRNIVDVLQAQRSLFSSIRDYSNSRYDYVLNMLRLKRAAGTLTPQDVYDIDKWMVEPGAPNANQYQEYLVQ
>NZ_CP019343.1|WP_085757966.1|1505247_1505715_-|DUF1249-domain-containing-protein
MQKKKYTVDLAGQMAECEANYARMMQLMPDMAEVDQRLFGVELSGGRPAHIRIDITERCKYTTMVDICQLPSNQSEQPWTTAPSFSLRVYHDAQMAEVVSYDAHRALHASYEYPNEKMFQRDEKIQLNTFLGEWLSHCLKYGHALDDTELCFQSL
>NZ_CP019343.1|WP_085757965.1|1503543_1504122_-|esterase-YqiA
MRPLVIYIHGFLSSPQSIKAQETQQYIDSEQLAVELLTPGLSNYPMQAYQQLQAIVEQHSNRQMALIGSSLGGFMATALAEAYDLKALVINPAVRPYELISGVLGENKNPYTGETFFLDASHIEELHQLEVQTLSKPERIKVLLQTGDETLDYRKAVSYYQGCPQLIEEGGDHRFQGFENHLPEAFKFLELQ
>NZ_CP019343.1|WP_085757964.1|1501312_1503196_-|DNA-topoisomerase-IV-subunit-B
MSDYNAESIEVLTGLDPVRKRPGMYTETTRPNHLAQEVIDNSVDEALAGHAKQIDVVIHKDGSLSCTDDGRGMPVDMHPEQKKPGVEVILTTLHSGGKFNNDNYQFSGGLHGVGVSVVNALSKVLEINIRRGGEVYEMEFKDGEKSKDLKVVDTCGKRNTGTSIRFLPDASYFDSAKFSISRMRHVLRAKAVLCPGLKVTFKDEASGEKEEWFYEDGLQDYMMASTKGWETLPAEPFIGSFAGSNEGADWAVQWLPEGGELTTESYVNLIPTAQGGTHVNGLRTGLLDAMREFCEFRNLLPRGLKLSPDDIWDKCCFILSSKLADPQFSGQTKERLSSREAAAFVSGVAKDSFSLWLNQHTEDAEKLADMCINNAQSRMKKSKKVARKKITSGPALPGKLADCSGDDAERGELFLVEGDSAGGSAKQGRDRQYQAILPLRGKILNTWEVDSQEILASEEVHNIAVAIGVDPASDDLSGLRYHKVCILADADSDGLHIATLICALFVRHFRPLVQAGHVFIAMPPLYRIDIGKEVFYALDEGEKQGILDRIEAEKKKGKIGVQRFKGLGEMNPMQLRETVMSGDTRRLVRLTIESGDETNQMMDMLLAKKRSSDRKSWLEEKGNLAEV
>NZ_CP019343.1|WP_085757963.1|1500789_1501179_+|VOC-family-protein
MLSHVTLGVNNIEESTKFYDAVMETIGYQRGSCGESWVGYGDISGKCIDTLWLLTPANGEAATSGNGTNVGLVAPTRESVDKFYNTALANGGVDEGAPGIRAVNHPNFYAAYVRDLDGNKLLAVCHEAE
>NZ_CP019343.1|WP_157117887.1|1499348_1499948_+|LysE-family-transporter
MMVFIAGFTLSLSLILAIGSQNAFVLKQGIQQQSVLLICSICALSDAILISLGVAGFGVIVNEYPVIEEYARYGGAGFLFVYSALSFKSSFSQNHALIPEEKLQNSTLKTVAICLAFTWLNPHVYLDTMVLLGSISTQYEGEQLQFALGAILGSFIFFFSLGYGARLLAPIFQSPKAWKVLEFIVGLTMLFIALLLVSG
>NZ_CP019343.1|WP_085757960.1|1498896_1499280_+|VOC-family-protein
MIDHVTISVSDVEKSKKFYESAFLPLGYNVSFGEEGKFWAFDLGKGFLFEICSPQTTEELTSFHIAFRAESQAKVQEFYEAALAAGARDNGGPGPRPNYSENYYACFVRDPDGHNIEAMFDTWDNCG
>NZ_CP019343.1|WP_085757971.1|1511099_1512146_-|alpha-amylase
MLLFRSLTIPLIALSLSSAVLADASHRADSHGPIGVMGEHMHKEGEVMFSYRYMLMEMDGNLDGTSSVSTDEILEDYRVAPENMTMEMHMLGAMYAPSDDLTLMLMVPLINNEMDHTMQMMGGMGGMGMMMPMRSEFTTETDGVGDIKVGGLYRLNQTDDSTLILNMTLSLPTGSIDEKDVTGMSMGNKVQLPYSMQLGSGTYDLKPGLTYTNSQPTYSWGAQTIATIRLDENDNDYSLGDRIMATAWYARPFADTFSWSLRGAYEYWGDVDGEDKKLNPMMKNMVPTADPDLRGGQRVDLAAGVNWIIPGSATNRLALELIKPVYQDLNGPQMETDYSLVLGWQLSL
>NZ_CP019343.1|WP_085757972.1|1512315_1512834_-|transposase
MSQYRRSYQKNGCYFFTVVTHHRMPLFSDPDNVDLLRHAFKKVKTRYPFTLESIVILPDHLHCIWVLPDGDSDYSVRWRLIKTEVSKRIAASVNTRGEKLIWQRRFWEHTIRDENDWRRHMDYIFYNPVKHGLCKRPGDWPYSSFTHAVKKGWYKQSWGAEQPESIAGVNYE
>NZ_CP019343.1|WP_085757973.1|1512995_1514429_-|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE
MKLSMPRFDQAQVLVVGDVMLDRYWHGGTSRISPEAPVPVVKVDQIEDRPGGAANVALNIAALGAGASLTGLVGNDEAAVALSETLSAAQVHSDFQVVESHPTITKLRVISRHQQLIRMDFEDSYSSEDAVALSGKAQQLLQAGIGALILSDYAKGALDDPQPLIQAARAAGIPVLVDPKGTDFSRYNGATLLTPNLHEFETIVGPCANEEELVSKGEQLMLEHNLQALLVTRGEQGMTLLRPNETELHLPARAREVFDVTGAGDTVISVLAASLAAGEPLPQSVALANLAASIVVAKLGTAAISAPELRRAVQAERGSERGVLSLEQLQVALQDARAHGEKVVFTNGCFDILHPGHAGYLEQARALGDRLVVAVNGDESISRLKGPGRPINPVDSRMSLLSKLESVDWVISFDTDTPEELLEALRPDILAKGGDYDKKSVVGWEIVEGYGGEVNVLSLFDNFSTTAIVEKVLDKNQ
>NZ_CP019343.1|WP_085757974.1|1514603_1515221_+|class-I-SAM-dependent-methyltransferase
MAIELAIDIDQVKGFLAEDEAAALYDAALTLSAKAPVLEIGSYCGKSTVYIGTACKKAGGVLYALDHHRGSEEHQLGEEYHDPDLYDDGAGLMDTFKEFRKNMRAADLEDTVIPIVASSGLACRGWNTPLSMVFIDGGHSMEAAMTDYQSWASHVMPGGILAIHDLFPNPDEGGQAPITIYRLAVASGLFEEIEVVNTLGLLRKL
>NZ_CP019343.1|WP_085757975.1|1516168_1517245_-|terpene-cyclase/mutase-family-protein
MSGVFLSKGLFPSDFFQPTVDFILNCQQDDGSIPWFEGSYADPWDHTEAAMALSIGGEWDAAAKAYQWLADNQLDDGSWWAAYKAGEIDNGERRESNFVAYIATGVWHHYLISHNKNFLKRMWPTVERAIEFVLSLQSEHGDIQWAVKPNGSPKMDALITGCSSIYKSLECAINIAVTMGEDSAEWVAARESLGDALRNKPERFDRTWESKARYSMDWFYPVLTGVLSKTQSQARLKERWDEFVEPELGCRCVSDEPWVTIAESCELTMALLAAGDHARAVNVYSWLHQWRLEDGSYWTGYQFVQDVLWPDEKPTWTAGAILLAADALTEYTPAAKLFTEVNLLSEGKSVPTSSTLIK
>NZ_CP019343.1|WP_085757976.1|1517241_1517958_-|class-I-SAM-dependent-methyltransferase
MQTVNFKYLPLQPGETILDLGCGEGRHVISAYLEQNVTSIGVDLSVDDLKTTWEKFQPFADPGNPNKSFGLSAANALQLPFADNTFDKIICSEVLEHIPDFKGALVEIERVLKPGGLFCASVPRTWPEKICWYFSDAYHNVEGGHLRIFEASKLKQQIEALGFTAFHKHWAHALHSPFWWLKCVFWQTQESNWLIKQYHRFLVWDLMDRPWFTRTLERLLNPLMGKSVVMYFKKEGNA
>NZ_CP019343.1|WP_085757977.1|1517973_1519272_-|glycosyltransferase-family-4-protein
MQAESVLPTAEPAATLADIASREGQPLKICLLGYRSQPYGGGQGIYIKYLSKALVEAGHQVDVISGQPYPHVDPRVKLIKMPGMNLFETGLGSLTWSHLRSLTNIIEWTGKLTGGFAEPRCFGRRVFKYLKHHGRHYDIIHDNQCLSWGMLKLQQRGFPLVTTIHHPITSDLQIALNAAPDWKARLLIKRWHSFLTMQKKVAQRLDNVVTVSERSQQDIASAFELQPSAINLVYNGIDTAEFRPMPEVAKKPYRIMATASADAPLKGVRYLLEAVAELAKRYPQLELLMVGQPQAGGATEQLIKRLKLGDRIIFVSGISTEQLVRHYAEAQVVVIPSVYEGFGLPAGEAMACGVPVVSTDGGALPEVVGDAGIIVPVKNSRAISEAVSDLLEHENKRKTLSAAGRQRIETLFCWQRAAGQMTEYYSQVMASR
>NZ_CP019343.1|WP_085757978.1|1519437_1521459_-|polysaccharide-biosynthesis-protein
MKLASKFSVKRRIVRLRGLFSIPAEKFFSLPRQWKQSGLLALDLCFIPLAFWLAVVARWGGLIYEFKVVDLVAIMLTMVFSAAFFLRIGLYRAVIRFMGQQAIITIIQGVTVSAVILALAAFLTRSGVPRSTPIIYWATALILIGGSRLLLRSLYHSVYTKQGVKAVIYGAGVSGRQLLNTIFHGGEYQTAAIVDDDPALVGSVINGVSVYHSSQLSDLCTEFSISHVFLAMPSASHLRRREIIDELEGLPVYVKTVPDFADLMSGAAKVGQLQDIELADLLGRDTVPPDPELIDQCIRDKVVMVTGAGGSIGSELCRQIVLCQPKELILFDISEYALYQIVRELERSKAKGEHDIRITPLLGSVQNQARLESIMTEFAVNTVYHAAAYKHVPMVEYNVVEGVSNNVFGTLAAAGAAVKAGVEHFVLISTDKAVRPTNVMGASKRMAELLLQAFASKYDNTGFCMVRFGNVLGSSGSVVPLFRHQILNGGPVTVTHKDIIRYFMTIPEAAQLVLQASAMGKGGDVFVLDMGEPVRIVNLARRLIRLMGCEVKDKAHPKGDIEIHFTGLRPGEKLYEELLLGDNVTGTGHPKVMRAEESLLPEDEIDRYTQQLKEACDKNDCEAIQQTLQQAVAEFDAKDGISDAIWTRRMENGLIEASVAEDNVVTGNFPKVT
>NZ_CP019343.1|WP_085757979.1|1521630_1522191_-|sugar-transferase
MNSLPIRILDWVLALSGLVLALPVLLLVTLLGFLDTGSPVFMQQRVGRHKKPFTLIKFRTMGLATASVATHQVDSSAVTTLGRFLRKTKLDELPQLINVLKGDMSLVGPRPCLFNQELLIAERDKKGVFTVLPGITGLAQVNHIDMSTPQRLAEWDQRMIENFTVGDYFKYLLMTVTGSGQGDRVK
>NZ_CP019343.1|WP_085757980.1|1522187_1523108_-|NAD-dependent-epimerase/dehydratase-family-protein
MKIAITGANGFVGRQLCPLLVDAGHDVLALSRDNQGQASGAVAIGDIEHCDQWARLLKGVDVVIHLAARVHSMDPEGAADLEQYQRINKDATLSLAEEAIRQGVKRFVFLSTIKVNGENTVPGQRFANTDQAKPGDAYALSKWQAEQGLQARCAEAEMELVVIRPPLVYGPGVSANFQRLMGLARLPLPFALVNNRRDMVSVDNLCDLLSLCISHPITANTVFLVSDGKPYSLATLLATISRVQGAASLLWPFPVSLLSALLTLLGKQALAQRLLGNLEVDISHTVTTLGWQPPNTLEQTLRKMHP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019343_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019343_6

4341235-4341326

Orphan

Consensus_repeat	Method
GTAGGTGATAATGCCGATGCATTCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019343_6

>merge|NZ_CP019343|6|4341235-4341326|CRISPRCasFinder
GTAGGTGATAATGCCGATGCATTCCCGAATGACGCCAATGAAACCGCCGATACTGATGGTGACGGCGTAGGTGATAATGCCGATGTATTCCC

>NZ_CP019343|6|3|4341235-4341326|CRISPRCasFinder
GTAGGTGATAATGCCGATGCATTCCC	GAATGACGCCAATGAAACCGCCGATACTGATGGTGACGGC
GTAGGTGATAATGCCGATGTATTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019343.1\|WP_157118063.1\|4348331_4348679_+\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|379309
NZ_CP019343.1\|WP_157118023.1\|4323857_4326692_-\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499
NZ_CP019343.1\|WP_085760330.1\|4332163_4332880_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085760331.1\|4332908_4333856_-\|aspartyl/asparaginyl-beta-hydroxylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|377460
NZ_CP019343.1\|WP_085760328.1\|4329902_4330277_-\|succinate-dehydrogenase,-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|181900
NZ_CP019343.1\|WP_085760345.1\|4353938_4355366_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143465
NZ_CP019343.1\|WP_085760327.1\|4329522_4329909_-\|succinate-dehydrogenase,-hydrophobic-membrane-anchor-protein	unknown	unknown	gnl\|CDD\|239574
NZ_CP019343.1\|WP_085760329.1\|4330744_4332031_+\|citrate-(Si)-synthase	unknown	unknown	gnl\|CDD\|180164
NZ_CP019343.1\|WP_085760337.1\|4345285_4345690_+\|sulfotransferase	unknown	unknown	gnl\|CDD\|379204
NZ_CP019343.1\|WP_169714046.1\|4343365_4344154_-\|sulfotransferase	unknown	unknown	gnl\|CDD\|379204
NZ_CP019343.1\|WP_085760333.1\|4337325_4339335_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225103
NZ_CP019343.1\|WP_085760344.1\|4352287_4353925_+\|acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236239
NZ_CP019343.1\|WP_085760336.1\|4344294_4345272_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP019343.1\|WP_085760338.1\|4345692_4346220_+\|sulfotransferase	unknown	unknown	gnl\|CDD\|379204
NZ_CP019343.1\|WP_085760332.1\|4333941_4336818_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP019343.1\|WP_085760609.1\|4327746_4329510_-\|succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|180193
NZ_CP019343.1\|WP_085760339.1\|4346250_4346862_+\|aspartyl/asparaginyl-beta-hydroxylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|377460
NZ_CP019343.1\|WP_085760342.1\|4348670_4350311_-\|sulfotransferase-family-protein	unknown	unknown	gnl\|CDD\|379204
NZ_CP019343.1\|WP_085760326.1\|4326988_4327696_-\|succinate-dehydrogenase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|235652
NZ_CP019343.1\|WP_085760340.1\|4346874_4348065_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380925

Protein	Function_ID	Function_description	E-value
NZ_CP019343.1\|WP_157118063.1\|4348331_4348679_+\|2OG-Fe(II)-oxygenase	gnl\|CDD\|379309	pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase superfamily. This family contains members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily.	1.88126e-16
NZ_CP019343.1\|WP_157118023.1\|4323857_4326692_-\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
NZ_CP019343.1\|WP_085760331.1\|4332908_4333856_-\|aspartyl/asparaginyl-beta-hydroxylase-domain-containing-protein	gnl\|CDD\|377460	pfam05118, Asp_Arg_Hydrox, Aspartyl/Asparaginyl beta-hydroxylase. Iron (II)/2-oxoglutarate (2-OG)-dependent oxygenases catalyze oxidative reactions in a range of metabolic processes. Proline 3-hydroxylase hydroxylates proline at position 3, the first of a 2-OG oxygenase catalyzing oxidation of a free alpha-amino acid. The structure of proline 3-hydroxylase contains the conserved motifs present in other 2-OG oxygenases including a jelly roll strand core and residues binding iron and 2-oxoglutarate, consistent with divergent evolution within the extended family. This family represent the arginine, asparagine and proline hydroxylases. The aspartyl/asparaginyl beta-hydroxylase (EC:1.14.11.16) specifically hydroxylates one aspartic or asparagine residue in certain epidermal growth factor-like domains of a number of proteins.	7.78961e-13
NZ_CP019343.1\|WP_085760328.1\|4329902_4330277_-\|succinate-dehydrogenase,-cytochrome-b556-subunit	gnl\|CDD\|181900	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit.	1.7848e-38
NZ_CP019343.1\|WP_085760345.1\|4353938_4355366_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143465	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.	0
NZ_CP019343.1\|WP_085760327.1\|4329522_4329909_-\|succinate-dehydrogenase,-hydrophobic-membrane-anchor-protein	gnl\|CDD\|239574	cd03494, SQR_TypeC_SdhD, Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase D (SdhD) subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. E. coli SQR, a member of this subfamily, reduces the high potential quinine, ubiquinone. SQR is also called succinate dehydrogenase or Complex II, and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type C SQRs because they contain two transmembrane subunits and one heme group. SdhD and SdhC are the two transmembrane proteins of bacterial SQRs. They contain heme and quinone binding sites. The two-electron oxidation of succinate in the flavoprotein active site is coupled to the two-electron reduction of quinone in the membrane anchor subunits via electron transport through FAD and three iron-sulfur centers. The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes.	1.61114e-24
NZ_CP019343.1\|WP_085760329.1\|4330744_4332031_+\|citrate-(Si)-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0
NZ_CP019343.1\|WP_085760337.1\|4345285_4345690_+\|sulfotransferase	gnl\|CDD\|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	6.82096e-05
NZ_CP019343.1\|WP_169714046.1\|4343365_4344154_-\|sulfotransferase	gnl\|CDD\|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	2.31674e-15
NZ_CP019343.1\|WP_085760333.1\|4337325_4339335_+\|hypothetical-protein	gnl\|CDD\|225103	COG2192, COG2192, Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones].	1.7785e-135
NZ_CP019343.1\|WP_085760344.1\|4352287_4353925_+\|acetolactate-synthase-large-subunit	gnl\|CDD\|236239	PRK08322, PRK08322, acetolactate synthase large subunit.	0
NZ_CP019343.1\|WP_085760336.1\|4344294_4345272_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.4249e-15
NZ_CP019343.1\|WP_085760338.1\|4345692_4346220_+\|sulfotransferase	gnl\|CDD\|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	2.78884e-05
NZ_CP019343.1\|WP_085760332.1\|4333941_4336818_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.89709e-17
NZ_CP019343.1\|WP_085760609.1\|4327746_4329510_-\|succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|180193	PRK05675, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_CP019343.1\|WP_085760339.1\|4346250_4346862_+\|aspartyl/asparaginyl-beta-hydroxylase-domain-containing-protein	gnl\|CDD\|377460	pfam05118, Asp_Arg_Hydrox, Aspartyl/Asparaginyl beta-hydroxylase. Iron (II)/2-oxoglutarate (2-OG)-dependent oxygenases catalyze oxidative reactions in a range of metabolic processes. Proline 3-hydroxylase hydroxylates proline at position 3, the first of a 2-OG oxygenase catalyzing oxidation of a free alpha-amino acid. The structure of proline 3-hydroxylase contains the conserved motifs present in other 2-OG oxygenases including a jelly roll strand core and residues binding iron and 2-oxoglutarate, consistent with divergent evolution within the extended family. This family represent the arginine, asparagine and proline hydroxylases. The aspartyl/asparaginyl beta-hydroxylase (EC:1.14.11.16) specifically hydroxylates one aspartic or asparagine residue in certain epidermal growth factor-like domains of a number of proteins.	3.94259e-07
NZ_CP019343.1\|WP_085760342.1\|4348670_4350311_-\|sulfotransferase-family-protein	gnl\|CDD\|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	1.04142e-47
NZ_CP019343.1\|WP_085760326.1\|4326988_4327696_-\|succinate-dehydrogenase-iron-sulfur-subunit	gnl\|CDD\|235652	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	9.59576e-163
NZ_CP019343.1\|WP_085760340.1\|4346874_4348065_+\|hypothetical-protein	gnl\|CDD\|380925	cd10527, SET_LSMT, SET domain found in Rubisco large subunit methyltransferase (LSMT) and similar proteins. Rubisco LSMT is a non-histone protein methyl transferase responsible for the trimethylation of lysine14 in the large subunit of Rubisco (ribulose-1,5-bisphosphate carboxylase/oxygenase). The family also includes SET domain-containing proteins, SETD3, SETD4 and SETD6, which belong to methyltransferase class VII that represents classical non-histone SET domain methyltransferases. Members in this family contain a SET domain and a C-terminal RubisCO LSMT substrate-binding (Rubis-subs-bind) domain.	8.57544e-05

>NZ_CP019343.1|WP_085760333.1|4337325_4339335_+|hypothetical-protein
MPSSDQPWVLGVSASHNGAACLLKGDRIVVAIQEERILGLKRAPINLKKNCLAINYCLQYAKITPADLDCIVLSSQSSLDDPSNTYTDNPIIQQAINAKIELIGHHKAHAYSAFAPSGFDDAAVLVIDGMGSPVSDLDKDEQKAIVGNISQGSETISLYDASGTTLTPLEKHLVTNHDWLKPYQGDVRMADFASLGGIFSSCAGQIFGSYSDAGKVMGLAPYGSPTIAAEEFFSINNGGLTFHNNVPKRFTFSERWPQHQQLYADLACSAQQALEEAILYLTRQLKQKSNSKNFVYAGGVALNSVANERIVRESGFENVYIIPPAEDSGAALGAAYYGLWSIKPTNTKNTLKSDSLGAVYSESEIDTAINNSPWVEVINDQASPEDVAELIANNNIIGFFAQGSELGPRSLGQRSILCDPRRKDAKKVLNDRVKHREGFRPFAPVILAEEVANWFDLEGTHPESPFMLRVLRFRENAEEKVPGVTHCDGSGRVQTVTKENNGQYYEVLKAFHAKTGVPILINTSLNVMGEPIVETPEDTLYSLAMTDLDYIFIGNKILGKKKRFKSALDFYPYFLQPDSLQAAKTQLQTSRQLQVSTPWGEANLPIHDPLTLQLAIDGADGLINGKTKARSVLKHLQAKQSKLSQSAFIRSLVQLRRGRVIGLSTTPKK
>NZ_CP019343.1|WP_085760332.1|4333941_4336818_-|TonB-dependent-receptor
MSRFKLPLVCAVVLPAQLASISSFAQIEEVVVTARKQSESLQEVPLAITAFSSETMERGDFVNLEDVAGNTVGLNYSGESSSGYQSSPTIRGLRQGFAQDRVQNVAIFLDGVYLSRQSMANMGMVDMERIEVVKGPQNSLYGRNAFAGAINYVTKKPQEEFEAYVSTTQGKDGREDWKVSLNGPLIENVLLARYTIGRSEYDGPFDNTHPLASADPTGFSNGGSDEKVGGWDDETYNLGFTWLASENVTVDTGYFNTSLKKESQGGYIMGGVREVARFQTTPFNDMNFNTVTHLTNVADKAGGSFEGLASTGNTLWKGALPLQPVRVPWSGGLDPVLDANGDIVKDANGQIQYIPGTDNYNWGLGDGVTGPDERRLGTNLDPRGFGFKADTEVMTFSVNWDINDVWSLAYNMGYIDHEGIQVGAASRDPLWGNSLTDNNADSPGRADVEMQSNVSSSRPIIELTTVSHEFRFDWSGSDDYSFSFGGYYSDSEDEQFSQTTYNPICTTADRLYDADQDPERGCYEPFGDNTYSPLYEAEFQGVAIYELFRDSWSGQKADYTIFDEQVYAVFAMFEYNLTPDLSFRVEARYTEEDKEIERLTDNFAIPAGGYYAGSGFGVGETNSYSTICAEGETTIVTDPDAPSSQEGDPCISRTAEDTFHYFTPKYSVDWQINDESMIYAYIANGLKAGGFNNTSDPDQGTYDEEVNWTYEIGSKNVLFEGMMQLNVAAYIVEWEDLVGGVAPTGVSESPNAGSVQANIGDVENYGFEIDGLIFINENFSVDFGAAYTNPRYEDDVKYADAKTAYYYECTPENLLTDTNPDGTPIGGNFDAVIDFDENCGNDDIGGNDLIKVSKEQYTLGFNYSDDFDNGWTMNLRLNGNYQSRQYIDPLNLAFIRSRTLWNMSMNFQGPEHWEFTVWGKNITDKEYVAGSFHIGIFNKHIVSLGAPANYGATLKYNF
>NZ_CP019343.1|WP_085760331.1|4332908_4333856_-|aspartyl/asparaginyl-beta-hydroxylase-domain-containing-protein
MRLASEFVKLPFRFDVDQLAKELSVVNKNDWIPHPGALAGNFSIPLISLNGEVNDLFNGEMKPTPTLLQSPYFRQVIASFDEVFGRSRLMRLDGGHDIPIHTDVNYHWFDRVRIHIPIVTNPDVTFFCGDERCQMKAGEVWLLDTWKAHRVINESSESRVHLVADTVGSSVFWQRVADIVAGKKMDEKFIAFDPGLEVEPVYEKYNAPLVMMPGELDSLCLDLIADIVANETNDPEVVNQFVNTINEFRWDWRRVWAQFGPTKQGWPEYGRLINRVQRPVKPIYLASNNSRAFIAFQARILGAALNENLLPAFTD
>NZ_CP019343.1|WP_085760330.1|4332163_4332880_+|hypothetical-protein
MIATPNFVYIHTSRHGGTFVNNLILNHIPDSRLIQYHGQLSNLPKHCAKLPIIGHVRNPWDFYVSLYFNYKKKKQYLFQIISENGTLDFEETISRYLTLGNQSEASKTLIDQLIDAAPKEIHPQLDPNLRNPGLTAKHFAKYPAGTGYYTWLFKLMYNSRKKHKLHIGRFENLREETMALLKTTGTPITPGILEYLNKREAMNPSEREKSYKDYYSKELQLLVAEKDRYIIERFGYTF
>NZ_CP019343.1|WP_085760329.1|4330744_4332031_+|citrate-(Si)-synthase
MSDKKATLAIPGKDAIDLPIYSGSIGPDVVDVGALTGQGMFTYDPGFVSTAACESKITYIDGGKGVLLHGGYPIEQLANESDFLETCWLLWNGELPTAAEKEAFVEKITMHTMVHDQMASFFKGFRRDAHPMAILCGVVGALSAFYHDSLDITNEKHRNISAIRLIAKMPTLAAMAYKFSVGQPFVYPRNDLNYSENFLNMMFSTPCEDYQISPTLAKAMDKIFILHADHEQNASTSTVRLAGSTGTNPFAAIAAGISALWGPSHGGANEAVLDMLNEIGDESRIDEFVAKAKDKNDPFRLMGFGHRVYKNFDPRAKVMKQTADEVLGELGLDNDPLLKIAKRLEQIALEDEYFVEKKLYPNVDFYSGIILKAMGIPTSMFTVIFALGRTPGWIAHWNEMIADNSRIGRPRQLYTGPTQRDFTPLDKR
>NZ_CP019343.1|WP_085760328.1|4329902_4330277_-|succinate-dehydrogenase,-cytochrome-b556-subunit
MTDKRPVNLDIGTIDLPLPALASITHRITGVILVAGAAVLLWLLDESLASEESFNSLKALCDSFLLKLVVWGVLSALIYHSVAGIKHLIMDLGIGETLEGGQTGAKLVLTVSAVLIILAGAMIW
>NZ_CP019343.1|WP_085760327.1|4329522_4329909_-|succinate-dehydrogenase,-hydrophobic-membrane-anchor-protein
MVTSVTNFGRSGLSDWLMQRVTGVILLAYTLLIAFVLLVSSPEYAQWKALFEQTWMKTFTLAAILSIASHAWIGLWSVSTDYLVKHVLTIKLGPAVGAQANLLRWAFQAASAVVLFTYVVWGIQILWG
>NZ_CP019343.1|WP_085760609.1|4327746_4329510_-|succinate-dehydrogenase-flavoprotein-subunit
MRTISFDGVIVGGGGAGMRSALQLSQSGYKTAVISKVFPTRSHTVSAQGGITCAIASNDPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVYELDHMGMPFSRTEEGRIYQRPFGGQSKGPDNPTQAARTCAAADRTGHALLHTLYQGNMKNETVFFNEWYATDLVKNEDGAVTGVIAICIETGEVVHIKSKATVLATGGAGRIYASTTNAHINTGDGIGMALRAGVPVQDIEMWQFHPTGIAGAGVLVTEGCRGEGGYLVNKDGERFMERYAPNAKDLAGRDVVARSMTLEILEGRGCGPDGDHVYLKLDHLGEEVLESRLPGICELSRTFAHADPVKEPVPVVPTCHYMMGGIPTNVDGQAITIDDEGNDQIIPGLYACGEVACVSVHGANRLGGNSLLDLVVFGRSAGLHIEKSLREGIDMKDATEDEIAKAASRLTNLNKTTGGDSVAALRKELQTIMQNHFGVFRRGDYMQEGIKKLAELRPRIENAHLEDKSNAYNTARIEALELHNLFEVAEATAIAAEERKESRGAHAREDFEDRDDENWLCHSVYFPGDKRVGKRGVNFTPKTVDSFEPKVRTY
>NZ_CP019343.1|WP_085760326.1|4326988_4327696_-|succinate-dehydrogenase-iron-sulfur-subunit
MLNVSIYRYNPETDAEPYMQDLEVDTGGKDLMVLDVLELIKAQDTTTAYRRSCREGVCGSDGMNINGKNGLACIMPLSEAMKGGNKLVLRPLPGLPVIRDLVVDMSLFYKQYEKVKPFLINNTPAPAIERLQSPEEREKLDGLYECILCACCSTACPSFWWNPDRFIGPSGLLQAYRFLADSRDTSTEQRLAELDDPFSVFRCHGIQNCVNVCPKGLNPTKAIGHIRNMLLTSAT
>NZ_CP019343.1|WP_157118023.1|4323857_4326692_-|2-oxoglutarate-dehydrogenase-E1-component
MQKDSMELLWGSSHISGGNAAYVEDLYETYLQDPNHVPEEWRTYFEKLPQVNGNVRQDIPHSTIRDHFTQLAKAKIKPLSVESDSGITDHERKQVRVIQLCSAYRQRGHQQTKLDPLGLKVRAPVPDLDLHYHKLSAADLDTVFQTGSLFIGKDQATLKEIVDSLEQTYCNTIGAEFMHIVATEERQWIQQRMESVRSKPAFGDDVLLHLHERLTAAEGLGKLLASKYPGVKRFGLEGGESLIPMMDAMIQRIGSYSAKEVVISMAHRGRLNMLVNVLGKNPSELFDEFEGRAEYHGSADVKYHQGFSSTVETPGGEMHLALAFNPSHLEIGAPVVEGSVRARQDRREDPEGKKVVPLILHGDAAFAGQGVVMETFQMSQTRAYKTGGTIHVVINNQVGFTTSKREDARSTEYCTDVAKMVQAPIFHVNGDDPEAVLFVSQMAVDYRQQFNKDIVIDLVCYRRRGHNEADEPSGTQPLMYQQIKKQRSTRDLYADKLIAQSLISKEYDTEVIENYRRALESGEHVAKSLVHEPNETLFVDWNPYLGHDWDCPCDTRIELKKLQDVAAKINAVPEGFPIQRQVGKIYEDRRKMAAGATPINWGFAETLAYGSLIDSGNPIRLTGQDVGRGTFSHRHAVLHNQNDASIHVPLQHMAEDQPNFTIHDSLLSEEAVLAFEYGYATTMPNVMVIWEAQFGDFANGAQVVIDQFITSGEHKWQRLCGLTMLLPHGYEGQGPEHSSARLERFLQLSAEHNIQVCVPTTPAQVFHMLRRQSLRPLRKPLIVMSPKSLLRHKEAVSTLEELADGQFQNVLAETDSLNAEKVTRAVLCSGKVYYDLRETRREKDMDNVAIIRLEQLYPFPEQELEQALAPYAELKEIVWCQEEPMNQGAWYSSQHHMRRVIHKHNRTLYLEYAGRDASASPAAGYMALHVAQQQKLIAEALGFE
>NZ_CP019343.1|WP_169714046.1|4343365_4344154_-|sulfotransferase
MVKKRQRGGKAKPNFFIIGAAKAATTSLASLLSEHPEAAIVQRKEPHFFSEDLNYAKGYKQYLAMYSHCRNELAIGDASTSYSRIRQHPHTIARIKHHVPKAKIIYMVRHPIERMVSAYIEHISTPGSLAPASINDAVLQIPAIIHSSRYWEVYQAYRGVFPESDIKVVWFEDYVDDTFAVFQDVCRFLGIDAEWRPDLSAENKNSKESTLQRKNKIGREDLKVSLEWDETLKQRIIAELKDDTVSLLQHFNRQGTYWSDLD
>NZ_CP019343.1|WP_085760336.1|4344294_4345272_+|class-I-SAM-dependent-methyltransferase
MNKLNKSQWTSYWQESAAINSFGPDNYNEEIASFWQHQLSGKNYSKLLDLACGNGAISWLANDIINTENPTTEITGVDFSNITPFSSLKRKPEDYPLLNFIGNTDIEALPFEDNSYDAAISQYGIEYSNLDKTIAELSRVLKHKSSLYLLIHTHQSDIVKQSTKSLQQYETILKQLKIHEDFQSLHTIIGAETNMQKVRNNPAFSLQSKVIESKLMPINQIIKSNNNPPALIAYKQQLISRFSDQAISQGPAGRKESIEAARRTFSDYIKRINDLKKIALSDQAINKLIESLNGQGFSIENQQPLSQGKIENIGLAIIAHRNQPA
>NZ_CP019343.1|WP_085760337.1|4345285_4345690_+|sulfotransferase
MQTSLSPQVKNFMANFEPHMSASNVLSTFKDPVFILAAPRSGSSLLFKTLCQAPDIWSIANESHQIYANFPHLAMENSNFDSGALGKKHADKKTATALRALYAASIVNRNNQRFFDLPQKPKNIIFLEKTPETL
>NZ_CP019343.1|WP_085760338.1|4345692_4346220_+|sulfotransferase
MPFLKSIYPSARFIYLHRDPRENISSIIEAWEQGEKNGKFITFRNLPDWPMPHWCLLLPRGWRNMKGRSLAEIAGFQWQSCNDAILNELEKISSKKWTTISHQELTSNTKATVTQLSNFIGNHIDEHFDEYISHELPLSSTTITAPKKDKWMRHKNEIEALLPGLQKTTDRINAL
>NZ_CP019343.1|WP_085760339.1|4346250_4346862_+|aspartyl/asparaginyl-beta-hydroxylase-domain-containing-protein
MNIKGDFIKIDDFDITDIKARVLDISEDIWNADAFRQKTFEVHKHTQTIKLIMDEDGRHTGPTLHPIYHELENVITPVENCIRRNYNNTLKAKKLRKKNPAGYFIRMILVRLNAKGIIPKHVDTGETLMKCHRIHLPIITNEKNIFSVGESSKALKAGEIWEINNRHEHGVVNSSDEGRIHLIMDYVLPGEKVKDTDGSNLTC
>NZ_CP019343.1|WP_085760340.1|4346874_4348065_+|hypothetical-protein
MAHITSDNPEASKTLQELQELVIENGGHIHPDINFVVNNNSLSIESPLNASNQDHLLYIPDACLPCYDDFDITLKNNEIAISPKNQSIPQSQQQAFNLLITLFNLTKKLDEHRENFPGLLQPLPEEIIELLGKKDPSAKTQLSPPGKTAEQHLLDSFFHTRYLSSVRQNGERKRVLLPMIDFINHNANALPFTTARADSGNFMGIIVCHWKDSDSSRECFVDYYPLDPMARFLGYGFVDTSANYIQSIPLSIVIESVGCLHINNKLPKPEEQNKLPTFEAFSKIDNYQPYVQIDQSGNLTLSHLAIPIKDDETKHLNPAIKHAIQMMSGKKLKGKKLERLAQKAQKTLIRENIKYSQNAYKYLENRDNSDLTESALSTLQQLFQFEHQQLSKYLKS
>NZ_CP019343.1|WP_157118063.1|4348331_4348679_+|2OG-Fe(II)-oxygenase
MAQKANKEYRFDITMFIDDIQISYYDEKEEGFFRWHTDMDFSRMLRKLSISVPLNQSSEYEGGELKFNPHGEEVTTYQKKGQGIIFPSFVLHTVTPVTKGRRYSLVAWVGGQPLR
>NZ_CP019343.1|WP_085760342.1|4348670_4350311_-|sulfotransferase-family-protein
MVKKSKKKKSNSPVGKRPSTRKKTSAKLLAKIAADMAVLQHALAAGDMATVEKNSQLIIEKYPATPQARFELAMFWYNQLGNYKLAIQLLEDALKLDPDHVPCLMHLGVIYIRVVRDGAPECFERVLELEPRNTDAMVKLAKTYMVKSDFANAESLLLTAAKADPSNCEIYLFLGDIYKADNRIEDAQATYRKVLTLEPRSGIAHRILSTISPHEAVDDDILAMEALYQNSFASMEDRRMAALGLGKAYDDLHDFDKSFHFYSEGNRLLRASLNTGPPDYRANVESICRIFSSTYVDKLKQHASDTEGPVFILGMPRSGTSLVEQIVASHSLVHGAGEFFALGVLLESAGPLSYPEIVDSLSCEDNAALLQNYWQKLKALAPSGEPFVTDKTPHYFQYIGLIAALLPNAKIIHCTRDPRATCVSIFMQGFPEGHYYASDLKELGEYYRCYQDIMRHWHELFPGQILDVNYEELVADKDVYVRKILDHCNLDVEEECLSFHKSKRSVQTPSFLQVRQPVYTKALKGWQRYEQHLQPLFEGLGESLST
>NZ_CP019343.1|WP_085760344.1|4352287_4353925_+|acetolactate-synthase-large-subunit
MKASDLFVKALEAEGVEYIFGIPGEENLDMLESLRHSTIKLILTRHEQAAGFMAATYGRLTGKAGVCMATLGPGATNFVTAAAYAQLGAMPMLMVTGQKPVKSSKQGQFQIVDVVDMMNPLTKFTHQIVSGDNIPSKIREAFRLAQEERPGAAHLELPEDIADEDTDAPLLEISDHRRPIAEEKGIRHAVEMIEQAKSPIILVGAGANRKLPSKMLSEFSAKTGIPFITTQMGKGVIDESSELFIGNTTLSDGDFVHRAIDSADLIINVGHDVVEKPPFFMREGSKVIHINFNSAKVDPVYFPQVEVLGDIANSIWQIKERISPQGHWDFSYFMTVRSHMDAHILEGADDGRWPVYPQRLVADIRAAMPDDGIIALDNGVYKIWFARNYRAKKPNTVLLDNALATMGAGLPSAMAAHLVYPNKAVTAICGDGGFMMNSQELETAVRLNMHLTVVILRDDAYGMIKWKQANMDFANYGLDYGNPDFVKYAQSYGAKGHRVEATEDLLPLLKRCQEEHGVHLIDVPVDYSDNDRILNQEIRELSQKI
>NZ_CP019343.1|WP_085760345.1|4353938_4355366_+|aldehyde-dehydrogenase-family-protein
MLQAQYPYYLANKAEQPNTDLDVTDKYTGEVATRVAMADTAAINRAIDAATAASEPMAQMPAYERQAVLNHCVRRFEERFEELAMALCIEAGKPIKDARGEVSRLIDTFRIAAEEAVRIGGEVMELEIAPRAKGYSGMYKRVPIGPCSFISPFNFPLNLAAHKIAPAIAAGCPFVLKPASRTPIGALVIGEVLAETNLPPGAFSILPCHRDGADLFTVDDRFKLLSFTGSPDVGWDLKARAGKKPVVLELGGNAACIVDHDTDLDDAVERIIFGAFYQSGQSCIGVQRIMVHDSLYEAFKQRFITATKALVMGDPKDEKTFVGPMISESEARRLDDWIQQAQAAGSTILCGGHRDGAMLDATVLENVPSDCDINTKEAFGPVAVLSSFSDFDQALDAVNNSDFGLQAGIFTRDIYKAQKAWNTLDVGGVVIGDVPSWRVDNMPYGGVKDSGVGREGVRFAIEDMTELRMMVIRTP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019343_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019343_7

4457333-4457839

Orphan

Consensus_repeat	Method
GGTGGATTGTAATCCACC	PILER-CR
GGTGGATTNTAATCCACC	CRT

11 spacers

The CRISPR arrays of NZ_CP019343_7

>merge|NZ_CP019343|7|4457333-4457839|PILER-CR,CRT
GGTGGATTATAATCCACCGCTTACCACAACTTTTGGTTGGGGTTGGTGGATTGTAATCCACCCTACTAGCACCAGCTTTCCGGGCGTAGGGTGGATTATAATCCACCGCTTACCACAACTTTTGGTTGGGGTTGGTGGATTGTAATCCACCCTACTAGCACCAGCTTTCCGGGCGTAGGGTGGATTATAATCCACCGCTTACCACAACTTTTGGTTGGGGTTGGTGGATTGTAATCCACCCTACTAGCACCAGCTTTCCGGGCGTAGGGTGGATTATAATCCACCGCTTACCACAACTTTTGGTTGGGGTTGGTGGATTGTAATCCACCCTACTAGCACCAGCTTTCCGGGCGTAGGGTGGATTATAATCCACCGGTTACCACAACTTTTGGTTGGGGTTGGTGGATTGTAATCCACCCTACTAGCACCAGCTTTCCGGGCGTAGGGTGGATTGTAATCCACCGCTTACCACAACTTTTGGTTGGGGTTGGTGGATTGTAATCCACC

>NZ_CP019343|7|3|4457333-4457839|PILER-CR
GGTGGATTATAATCCACC	GCTTACCACAACTTTTGGTTGGGGTT
GGTGGATTGTAATCCACC	CTACTAGCACCAGCTTTCCGGGCGTAG
GGTGGATTATAATCCACC	GCTTACCACAACTTTTGGTTGGGGTT
GGTGGATTGTAATCCACC	CTACTAGCACCAGCTTTCCGGGCGTAG
GGTGGATTATAATCCACC	GCTTACCACAACTTTTGGTTGGGGTT
GGTGGATTGTAATCCACC	CTACTAGCACCAGCTTTCCGGGCGTAG
GGTGGATTATAATCCACC	GCTTACCACAACTTTTGGTTGGGGTT
GGTGGATTGTAATCCACC	CTACTAGCACCAGCTTTCCGGGCGTAG
GGTGGATTATAATCCACC	GGTTACCACAACTTTTGGTTGGGGTT
GGTGGATTGTAATCCACC	CTACTAGCACCAGCTTTCCGGGCGTAG
GGTGGATTGTAATCCACC	GCTTACCACAACTTTTGGTTGGGGTT
GGTGGATTGTAATCCACC

>NZ_CP019343|7|4|4457333-4457839|CRT
GGTGGATTATAATCCACC	GCTTACCACAACTTTTGGTTGGGGTT
GGTGGATTGTAATCCACC	CTACTAGCACCAGCTTTCCGGGCGTAG
GGTGGATTATAATCCACC	GCTTACCACAACTTTTGGTTGGGGTT
GGTGGATTGTAATCCACC	CTACTAGCACCAGCTTTCCGGGCGTAG
GGTGGATTATAATCCACC	GCTTACCACAACTTTTGGTTGGGGTT
GGTGGATTGTAATCCACC	CTACTAGCACCAGCTTTCCGGGCGTAG
GGTGGATTATAATCCACC	GCTTACCACAACTTTTGGTTGGGGTT
GGTGGATTGTAATCCACC	CTACTAGCACCAGCTTTCCGGGCGTAG
GGTGGATTATAATCCACC	GGTTACCACAACTTTTGGTTGGGGTT
GGTGGATTGTAATCCACC	CTACTAGCACCAGCTTTCCGGGCGTAG
GGTGGATTGTAATCCACC	GCTTACCACAACTTTTGGTTGGGGTT
GGTGGATTGTAATCCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019343.1\|WP_085760427.1\|4461255_4462152_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP019343.1\|WP_085760421.1\|4453549_4454455_-\|hydroxymethylglutaryl-CoA-lyase	unknown	unknown	gnl\|CDD\|180206
NZ_CP019343.1\|WP_157118029.1\|4448720_4450016_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225471
NZ_CP019343.1\|WP_085760425.1\|4459509_4460679_-\|isovaleryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173845
NZ_CP019343.1\|WP_085760418.1\|4450452_4450947_-\|regulatory-protein-RecX	unknown	unknown	gnl\|CDD\|234646
NZ_CP019343.1\|WP_085756724.1\|4466526_4466919_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085756723.1\|4465584_4466487_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085760424.1\|4457881_4459489_-\|methylcrotonoyl-CoA-carboxylase	unknown	unknown	gnl\|CDD\|178415
NZ_CP019343.1\|WP_085760429.1\|4469962_4470442_-\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|379238
NZ_CP019343.1\|WP_085760414.1\|4446456_4447827_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236532
NZ_CP019343.1\|WP_085760423.1\|4456484_4457267_-\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|235664
NZ_CP019343.1\|WP_085756722.1\|4464966_4465581_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019343.1\|WP_085760415.1\|4447806_4448442_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223532
NZ_CP019343.1\|WP_169714056.1\|4452366_4453437_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369561
NZ_CP019343.1\|WP_085760419.1\|4451120_4452164_-\|recombinase-RecA	unknown	unknown	gnl\|CDD\|236476
NZ_CP019343.1\|WP_085760417.1\|4450018_4450456_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270371
NZ_CP019343.1\|WP_085760426.1\|4460701_4461082_-\|MerR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133403
NZ_CP019343.1\|WP_085760422.1\|4454458_4456480_-\|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha	unknown	unknown	gnl\|CDD\|227111
NZ_CP019343.1\|WP_085756725.1\|4467680_4468361_+\|VPLPA-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|377878
NZ_CP019343.1\|WP_085760428.1\|4463519_4464947_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143456

Protein	Function_ID	Function_description	E-value
NZ_CP019343.1\|WP_085760427.1\|4461255_4462152_+\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	1.18106e-33
NZ_CP019343.1\|WP_085760421.1\|4453549_4454455_-\|hydroxymethylglutaryl-CoA-lyase	gnl\|CDD\|180206	PRK05692, PRK05692, hydroxymethylglutaryl-CoA lyase; Provisional.	1.25217e-170
NZ_CP019343.1\|WP_157118029.1\|4448720_4450016_+\|hypothetical-protein	gnl\|CDD\|225471	COG2919, COG2919, Septum formation initiator [Cell division and chromosome partitioning].	0.00178324
NZ_CP019343.1\|WP_085760425.1\|4459509_4460679_-\|isovaleryl-CoA-dehydrogenase	gnl\|CDD\|173845	cd01156, IVD, Isovaleryl-CoA dehydrogenase. Isovaleryl-CoA dehydrogenase (IVD) is an is an acyl-CoA dehydrogenase, which catalyzes the third step in leucine catabolism, the conversion of isovaleryl-CoA (3-methylbutyryl-CoA) into 3-methylcrotonyl-CoA. IVD is a homotetramer and has the greatest affinity for small branched chain substrates.	0
NZ_CP019343.1\|WP_085760418.1\|4450452_4450947_-\|regulatory-protein-RecX	gnl\|CDD\|234646	PRK00117, recX, recombination regulator RecX; Reviewed.	1.53112e-35
NZ_CP019343.1\|WP_085760424.1\|4457881_4459489_-\|methylcrotonoyl-CoA-carboxylase	gnl\|CDD\|178415	PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain.	0
NZ_CP019343.1\|WP_085760429.1\|4469962_4470442_-\|glycosyltransferase-family-1-protein	gnl\|CDD\|379238	pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1.	5.999e-05
NZ_CP019343.1\|WP_085760414.1\|4446456_4447827_+\|HAMP-domain-containing-protein	gnl\|CDD\|236532	PRK09470, cpxA, envelope stress sensor histidine kinase CpxA.	1.20025e-62
NZ_CP019343.1\|WP_085760423.1\|4456484_4457267_-\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|235664	PRK05995, PRK05995, enoyl-CoA hydratase; Provisional.	6.9952e-112
NZ_CP019343.1\|WP_085760415.1\|4447806_4448442_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|223532	COG0456, RimI, Acetyltransferases [General function prediction only].	1.22853e-05
NZ_CP019343.1\|WP_169714056.1\|4452366_4453437_-\|alpha/beta-hydrolase	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	6.28889e-63
NZ_CP019343.1\|WP_085760419.1\|4451120_4452164_-\|recombinase-RecA	gnl\|CDD\|236476	PRK09354, recA, recombinase A; Provisional.	0
NZ_CP019343.1\|WP_085760417.1\|4450018_4450456_+\|hypothetical-protein	gnl\|CDD\|270371	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.42119e-08
NZ_CP019343.1\|WP_085760426.1\|4460701_4461082_-\|MerR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|133403	cd04776, HTH_GnyR, Helix-Turn-Helix DNA binding domain of the regulatory protein GnyR. Putative helix-turn-helix (HTH) regulatory protein, GnyR, and other related proteins. GnyR belongs to the gnyRDBHAL cluster, which is involved in acyclic isoprenoid degradation in Pseudomonas aeruginosa. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	1.45563e-52
NZ_CP019343.1\|WP_085760422.1\|4454458_4456480_-\|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP019343.1\|WP_085756725.1\|4467680_4468361_+\|VPLPA-CTERM-sorting-domain-containing-protein	gnl\|CDD\|377878	pfam07603, DUF1566, Protein of unknown function (DUF1566). These proteins of unknown function are found in Leptospira interrogans and in several gamma proteobacteria.	1.41366e-05
NZ_CP019343.1\|WP_085760428.1\|4463519_4464947_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143456	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.	0

>NZ_CP019343.1|WP_085760423.1|4456484_4457267_-|enoyl-CoA-hydratase/isomerase-family-protein
MKFVTTSLDHRGVATVTLNNPDKHNAFDDVVINELKQTFAELNDNCDVRVVVLASNGKSFSAGADLNWMKRTANYSREENLADAVALADMLKALNFMAKPTIARVQGATFGGGVGLVSCCDMAVAANRAVFSLSEAKIGMIPATIGPYVVAAIGQRAARRYFTTAGRFDAGEALNLGLVSQVVADEAALDAAIAELVEQLLTSGPAAVAAAKQLVFEVDGEITEQVISESCERIADIRVSAEGQEGLTAFLEKRSPAWVK
>NZ_CP019343.1|WP_085760422.1|4454458_4456480_-|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha
MTIQYFHKILIANRGEIACRVIRTARKLGIRTVAVYSDADKDALHVSMADEAIHIGAAPSRDSYLVYERVIEAAKKTGAEAIHPGYGFLSENAAFCKACKDNDIVFIGPPVGAIEAMGSKSAAKTIMEKAAVPLVPGYHGDDQSRDILKQAADEMGYPVLLKAVAGGGGKGMRQVWSEADFDEALEAAKRESLNAFGNEDMLVEKYLTQPRHVEIQVFCDQQGNAVYLFERDCSVQRRHQKVIEEAPAPGMTETLRSAMGEAAIRSAQAINYEGAGTVEFLLDSDGSFYFMEMNTRLQVEHPVTEMITGQDLVEWQLRVAAGEPLPASQQQLSISGHAFEARIYAEDPDNDFLPVTGTLSFLQPPASSDHVRVDTGVLQGDEVSVYYDPMIAKLIVWDETREKALQRLTQALKDYRIGGMTTNIDFLYNLASSKPFAEAELDTGFIEKHHPLIFRSRSADIEQAVALASLYLMLQQQQQAERNRANSTDANSPWFDASGWRLNEAPQHQFELQIQQQVIAVTAEQIGKGVNRRYRISANGNTTTVQGSLHNHQLKATLDGHQLSATVAEHQAGYSLYTQDSAVTFNLLQPDLGDTEDCAGAGGLAAPMNGTMVALLVEAGATVKKDDALLVMEAMKMEHTIRAPADGKVVEFYYQAGSLVDGGSELVNFEAVE
>NZ_CP019343.1|WP_085760421.1|4453549_4454455_-|hydroxymethylglutaryl-CoA-lyase
MNVPKKVRLVEVGPRDGLQNEQQAIDTGTKIQLIEQLAAAGLGYIEAGAFVNPKWVPQMAGSAEVFEQLKRAEHVTYAALVPNLQGFERALAVNASEVAVFCAASEAFTQKNTNCSIEESLQRAAAVIDAATTAGIKVRGYISCVVGCPYEGAIDPAQVAYVAKRLFDLGCYEISLGDTVGVGTPIAVSQMLAAVSDNIPMDKLAVHFHDTYGQALANILAALQLGVAVIDSSVAGLGGCPYAKGASGNVATEDVVYLLDGMGIEHGIDLPQLASTGRWISALLGRAPASKVAQALAADIK
>NZ_CP019343.1|WP_169714056.1|4452366_4453437_-|alpha/beta-hydrolase
MLLLAPLVIVLVLFVVTQFYFQGEDLSQYQQPRPEVINAGVEPSEAHGGIVAFLTPTAESRAKVKQLDKNARLLSMREGMDKFGKTAQFEGKIIPVDYQGIKGEWLVPPNANVQNRMLYIHGGAFLMGSPVSHRPITAHYARLIGGPVFALDYRLLPEHQRQASIDDSRAAYQWILEQGPEGAANLNNLYVSGDSAGGNLALALSLWVRDKGLRAPQAVVALAPVTDSTYTSPSLTSNVKTDVLLSPLAGALAKYHQSLLVWFTAVTYRIRPADPSISPVFGDLSNLPPTLIHASSNEMLLDDSVRFANKARAAGSPVTLKVWHGLLHVWHMFVDTVPEAQQAFADIEQFLKQHSR
>NZ_CP019343.1|WP_085760419.1|4451120_4452164_-|recombinase-RecA
MDTNKEKALSAALSQIERQFGKGSIMKMGEESREAIPAISTGSLGLDVALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAEAQKNGATCAFIDAEHALDPSYAEKLGVNIDDMLVSQPDTGEQALEITDMLVRSGSVDVVVVDSVAALTPKAEIEGDIGDSHMGLAARMMSQAMRKMTGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRTGAIKDGDEVIGNETRVKVVKNKVSPPFKQAEFQIMYGKGIYRMGEVIDLGVKQGLIDKAGAWYAYNGDKIGQGKANAAKFLLDNPDIADTIEGKIRSELLGPVSGGTPDLQVVEDMEAAE
>NZ_CP019343.1|WP_085760418.1|4450452_4450947_-|regulatory-protein-RecX
MPVKPKEIKPVDIRRAAMDLLARREHAFQELVNKLSTKFLRYADYGYSFDKECLMELIADQIFTLKNENLQSDERFVESFINGRKSSGKGPLRIRRELEQKQVSSALINTYLEAVADEWHGLAQEVYLKKFGGQESKDFKEKAKRSRFLVYRGFSHELVRSIVR
>NZ_CP019343.1|WP_085760417.1|4450018_4450456_+|hypothetical-protein
MKMNTAYLRRLSLTCISCLLFSAAHAEVSVVVHPNIDMSNISPAQASNIFLGKTKTLPNGKLVIPIDQERSSDVRNEFYKKLVNKNQNQLNAYWARQVFTGKSQPPNQVSNDDEVKLLVADNPSMIGYINSSAVDASVKVLLRIP
>NZ_CP019343.1|WP_157118029.1|4448720_4450016_+|hypothetical-protein
MAIPLQINKRIIPLLLLALLPSVSLAYTDAEIDQMFKALQAENDALKEEIKQLKQESEATIQEQLVPARQNNQTQISSVKRSLEKQQSALKINGFLTAGASKADPAVYDQNIDISDDITFDTDTIVGLQTSFQLSPKSDVTVQMVARAADNWELEAEWAFLRYNLTDDLSFRAGRLRLPLYLFSESLDVGFSYPWVRPPNEVYALPIKNYEGIDLLYTASTGDWIHQLQVFAGNDNDDNFDTSNFFGGNITSSSGPWTYRISAFKFDIEFSKFAGFEPTENIEDGGTYYTLAGMYDDGNWLAITEISTYKTDQTTVFRDTDSGYVTLGKHMGKFMPHFTYGKSYTTNEPKDDPVDILLGQFINFTGTSYAAGLRYNLTENTSAKLEWTHYTDMDGTGGIWNGLRFDELNGSSGPEDIDNIDIYSIVLDVVF
>NZ_CP019343.1|WP_085760415.1|4447806_4448442_-|GNAT-family-N-acetyltransferase
MNIDSSIVEATPASSGLAALLAKAFADDPVMAYIIPQQQGRLQRIEGIMQLAIKTYRHSGLIETVAGRSAAVWQRPSPGEPSLLAVILNSLEAMVRLRGAVDRAQQVQRITAAARIAQPHWYLAIIGTDPACRGQWQGGASLASQLLLSVLKRCDQQQLPAYLESSNYHNLGFYRRFGFEVTQTLQLPDGPAMWAMVREPEAGQSSVAFYQ
>NZ_CP019343.1|WP_085760414.1|4446456_4447827_+|HAMP-domain-containing-protein
MNRLFFKIFISFWLITIAVLLAMLAATRYIAEIEQSPNPSPYELGKAAQGILSRTADIAQERTPKELELWIQGLPSIHSVNAYIINLEDPKRSTIVPDDVRRAAAQLSLEQPKLTVKLTTSMLYGQLLIRDGKPISELLIATPLPPSPLVYFFTTYIWFRLLAAILVSGLICFFMARAITRPIVALRDATQELAEGNLDFRFDLSKYRSDEISELGHDFNNMAERIGQTLEEQKQLVRDISHELRSPLGRIQVALALAQRKHGEDTAELERVEKECDRLNALIGQLLVVPNYNQPLDDTIDLVSLVKGIASDDQLEAEQGHKTIEVKTDLEELLFTTSGNLMWHAVDNLTRNALRHAPENTTVTIHLGYQPADGNIRITVSDQGQGVPDDLIENIFHPFYRVETERGHSDTGGHGLGLSIASRAIEHHGGSIKARNISRGFEVAISLPDNLLVESH
>NZ_CP019343.1|WP_085760424.1|4457881_4459489_-|methylcrotonoyl-CoA-carboxylase
MPIIQSKINTRSTEFSDNAKAMQAQVDDLREKLAAIKLGGGEKSRERHLARGKLLPRDRVAGLLDPGSPFLEISQLAAMDVYGEDVHCAGVIAGIGRVSGQECMIVANDATVKGGSYYPLTVKKHLRAQTIAQENNLPCIYLVDSGGANLPRQDEVFPDREHFGRIFFNQANMSAQNIPQIAVVMGSCTAGGAYVPSMADESIIVKEQGTIFLGGPPLVKAATGEIVSAEDLGGADVHCRTSGVADHLAQNDHHALELARNSVARLNRVKPIALDIQEPVEPLFDSEEIYGIIPKDTRQPYDVREIIARIVDGSNFDEFKALYGSTLVCGFARISGYPIGIVANNGILFGESAQKGAHFIELCAQRKIPLVFLQNITGFMVGKQYENDGIAKHGAKMVTAVATAQVPKFTVLIGGSFGAGNYGMCGRAYDPRFMFMWPNARISVMGGEQAAGVLAQVKRDQKTKAGEAWAESEEAEFKQPIIDNYESQGHPYYASARLWDDGVIDPAQTREVLALAISASLNKAIEDTRFGVFRM
>NZ_CP019343.1|WP_085760425.1|4459509_4460679_-|isovaleryl-CoA-dehydrogenase
MSTSYPTLNFNLGEEIDMLRDAVYKFCQDEIAPRAEAIDADNAFPMDLWKKFGDMGLLGMTVAEEYGGTNMGYLAHAVVMEEISRASGSVGLSYGAHSNLCVNQIHKNGTAAQKEKYLPKLCSGEHIGALAMSEPNAGSDVVSLKLKAEKQGDHYILNGNKMWITNGPDAHTYVIYAKTDISAGSRGITAFIVERDTEGFSRHQKLDKLGMRGSNTCELVFENAKVPAENILGKEGGGVAVLMSGLDFERAVLAAGPLGIMQSCMDLVVPYIHDRKQFDQSIGEFQLVQGKVADMYAELAASRAYLYAVNQACDRGQESRKDCAGVILFIAERATQKALDAIQLLGGNGYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETQ
>NZ_CP019343.1|WP_085760426.1|4460701_4461082_-|MerR-family-DNA-binding-transcriptional-regulator
MSKVRQYTISELAAEFDVTTRTIRFYEEKGLLAPERKGTSRIYSSADHTKLKLILRGKRLGFSLEESGEIISMYDPDHGNAAQLKKLMTMIQTRREQLASQLEDLQVMMLELEQVEQRAAEALGKS
>NZ_CP019343.1|WP_085760427.1|4461255_4462152_+|alpha/beta-hydrolase
MKTLRNFFLNLKVISIMVYSAILGRAYLKDYQPETLCYCQSGGREMMLDIYRPKAPSAAPLPVILWFHGGAWKMGNRQAIERIAAEQLERGFALVSVSYSLSDIAQWPSQCHEAKAALRYLRANASELGINADKIIAAGMSAGAHMACMLGVSADHQTLNGELGEHNDQPNTVQGVLALYPPTDFLSVPEDYDGLLDYYAPDSPVTELLGESIRTAPEKADLASPAKLANKDCPPTLLLHGDADPIVPIAQSELMHSALLNAGAQSEFIPVADYTHGDYRFNRDQPAEKISSFLQTLI
>NZ_CP019343.1|WP_085760428.1|4463519_4464947_+|aldehyde-dehydrogenase-family-protein
MRQYTNFYINGQWVAPHSGNTLDVINPATEAISGHIAMGSAADVDTAVAAAKAAFPSYANTSREQRLALLENILSIYNRRYDEIAQAISEEMGAPITIAMEDQAGTGTGHLETAIETLKTFEFEEPMGSTRIYKEPIGVCALITPWNWPINQVVCKVVPALATGCTIVLKPSEVAPYSSYLFAEVLAEAGVPAGVFNLVNGDGPTVGAAMSCHPDVDMVSFTGSTRAGAQVAKAAADTVKRVSQELGGKSANIILADADLEEAVTEGALGCFFNTGQSCDAPTRMLVPEQLHDKAVEIAVRAAQSVVTGDPSDKNTTMGPVVSQVQFDRIQSLIKQGIDEGSKLACGGPGKPDKLDKGYYVKPTIFSHVKNNSTIAQQEIFGPVLAILPYKDEAEAIEIANDSLYGLCGYVWGDEARAVAVASKMRTGMVLLNGDEGDYNAPFGGYKQSGNGREFGKFGFEEFLETKAIMGISGQ
>NZ_CP019343.1|WP_085756722.1|4464966_4465581_-|hypothetical-protein
MHRDIIYQSIRDEIIDQKRCQFQLFSIALAVTSAVLAYAAATKVHSLVYITPMLLIELALIVIFDKAVTIQRKVGYLKKIEQNPDISLWRWETDLDNYRGHLAVNYQANLSGESRKHSYVTSVGVMMMVLALFCAGLFYFGPDGAALPLVDNRAAGWIDIFVLSVLLSTAYFFCSKRKSLVTGVNCSAAISAKWDMILQLRPGE
>NZ_CP019343.1|WP_085756723.1|4465584_4466487_-|hypothetical-protein
MYQLRQWIKNLSVAVLLLLFVEASHAGLITALVRLLDDLGSAAPAARKVDKVPVREIPAKPGAVYDDVGRVAADAEDPIPAHVGGDTVERQVLRTGLDVGRQHDSFASVAHEPELLVAMPTKPQHYKKVYQTDSVSQGAEEQLQHFARQVKEGEGVTDLNGGSLDLYARIHRAEGSPIVVFAHSEKGGKRLFMPNGEKVLDKDIHRQCARAGKLCVVLTCHGDDFALQGQVTAWEAMSMWQAAQKSIQAADGLPVTNGEFIHVMRTRKSQLDTQHQAKVALSFSGPVGSLFYYYASDKDA
>NZ_CP019343.1|WP_085756724.1|4466526_4466919_-|hypothetical-protein
MLANWMVFPEYMALGALGAASIEYLKNYELKNNRTALTYRRIIASLVYRFKFLLFLLASGFIAWALNENNPNATVWQIVISGAGANALANKGIEASLSRQELTAGAEDDQPPGLSAERPHPYRITLRDLF
>NZ_CP019343.1|WP_085756725.1|4467680_4468361_+|VPLPA-CTERM-sorting-domain-containing-protein
MLKQTLAIIGLTISLSANAALYDRGNGMIYDDTLDITWLQDANYAQTSGYDADGRMTWDDANAWADQLNYGGFDDWRLASANLINGASPCFAYDGSCDRGYNITTGELGHMFYNNLGNLGAYDASGSSQSGFGVSNSSFTDGDSGDNVSILNLQNNVYWYGEEHAPSTVNAWIFGTGGGQQYTAGKSTNIYSWAVRAGDVSSVPVPAAAWLFGTALLGLVGVKRKK
>NZ_CP019343.1|WP_085760429.1|4469962_4470442_-|glycosyltransferase-family-1-protein
MLKMISKGLPLRYLSAASPDEYSELLNRIKFFISADVGTDEYMIKNFEALACGCVLVAYRQKLEEARLGLVDMVNCILYSTPEEAIEKVKKVSSSQSLLENIAYKGELLAKKYTTKCHDEALLAVINKDIQQTNKRYSVFDRLRGFLLDHTFLLDVTIR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP019343_4	4.1\|1374667\|33\|NZ_CP019343\|PILER-CR	1374667-1374699	33	NZ_CP019343.1	1375050-1375082	0	1.0
NZ_CP019343_4	4.3\|1374859\|33\|NZ_CP019343\|PILER-CR	1374859-1374891	33	NZ_CP019343.1	1374954-1374986	0	1.0
NZ_CP019343_4	4.3\|1374859\|33\|NZ_CP019343\|PILER-CR	1374859-1374891	33	NZ_CP019343.1	1375146-1375178	0	1.0
NZ_CP019343_4	4.2\|1374763\|33\|NZ_CP019343\|PILER-CR	1374763-1374795	33	NZ_CP019343.1	1374954-1374986	1	0.97
NZ_CP019343_4	4.2\|1374763\|33\|NZ_CP019343\|PILER-CR	1374763-1374795	33	NZ_CP019343.1	1375146-1375178	1	0.97

1. spacer 4.1|1374667|33|NZ_CP019343|PILER-CR matches to position: 1375050-1375082, mismatch: 0, identity: 1.0

taatccaccctacgatggtggtatctcgtttac	CRISPR spacer
taatccaccctacgatggtggtatctcgtttac	Protospacer
*********************************

2. spacer 4.3|1374859|33|NZ_CP019343|PILER-CR matches to position: 1374954-1374986, mismatch: 0, identity: 1.0

caatccaccctacgatagtggtatctcgtttac	CRISPR spacer
caatccaccctacgatagtggtatctcgtttac	Protospacer
*********************************

3. spacer 4.3|1374859|33|NZ_CP019343|PILER-CR matches to position: 1375146-1375178, mismatch: 0, identity: 1.0

caatccaccctacgatagtggtatctcgtttac	CRISPR spacer
caatccaccctacgatagtggtatctcgtttac	Protospacer
*********************************

4. spacer 4.2|1374763|33|NZ_CP019343|PILER-CR matches to position: 1374954-1374986, mismatch: 1, identity: 0.97

caatccaccctacgatggtggtatctcgtttac	CRISPR spacer
caatccaccctacgatagtggtatctcgtttac	Protospacer
****************.****************

5. spacer 4.2|1374763|33|NZ_CP019343|PILER-CR matches to position: 1375146-1375178, mismatch: 1, identity: 0.97

caatccaccctacgatggtggtatctcgtttac	CRISPR spacer
caatccaccctacgatagtggtatctcgtttac	Protospacer
****************.****************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019343_1	1.1\|350384\|26\|NZ_CP019343\|CRISPRCasFinder	350384-350409	26	NZ_CP022681	Streptococcus respiraculi strain HTS25 plasmid unnamed1, complete sequence	4740-4765	5	0.808

1. spacer 1.1|350384|26|NZ_CP019343|CRISPRCasFinder matches to NZ_CP022681 (Streptococcus respiraculi strain HTS25 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

tacaagtatgtttacaggcgtgtttt	CRISPR spacer
tacaagaatgtttgcaggcgtgtgac	Protospacer
****** ******.*********  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1558174 : 1567008

Enterobacteria_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157117889.1\|1558174_1559044_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.4e-34	36.0
WP_085758011.1\|1559064_1559607_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.0e-57	61.7
WP_085758012.1\|1559606_1560482_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.3e-101	63.5
WP_085758013.1\|1560481_1561561_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.3e-99	50.4
WP_085758014.1\|1561796_1563539_-	lipid A export permease/ATP-binding protein MsbA	W8CYL7	Bacillus_phage	2.7e-51	29.4
WP_169713942.1\|1563735_1564794_+	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_085758016.1\|1564790_1566281_-	hypothetical protein	NA	NA	NA	NA
WP_085758017.1\|1566300_1567008_-	sulfotransferase family 2 domain-containing protein	A0A076FG97	Aureococcus_anophage	7.7e-05	25.5

DBSCAN-SWA_2

3285017 : 3298031

Hokovirus(22.22%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085759502.1\|3285017_3286532_+\|tRNA	lysine--tRNA ligase	A0A2K9KZX5	Tupanvirus	5.9e-87	37.5
WP_085759503.1\|3286565_3288869_-	response regulator	A0A1V0SGX0	Hokovirus	2.5e-44	34.3
WP_085759504.1\|3288872_3289229_-	response regulator	NA	NA	NA	NA
WP_085759505.1\|3289231_3290749_-	adenylate/guanylate cyclase domain-containing response regulator	A0A218MLZ2	uncultured_virus	4.2e-32	41.3
WP_085760551.1\|3290987_3291635_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_085759506.1\|3291859_3292060_+	type II toxin-antitoxin system HicA family toxin	A0A0D4DC32	Acinetobacter_phage	1.8e-12	69.6
WP_085759507.1\|3292056_3292437_+	type II toxin-antitoxin system HicB family antitoxin	A0A0D4DCG1	Acinetobacter_phage	7.7e-28	49.2
WP_085759508.1\|3292439_3292829_-	SirB2 family protein	NA	NA	NA	NA
WP_085759509.1\|3292831_3294178_-	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.8e-39	32.8
WP_085760552.1\|3294432_3295902_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.7e-91	40.7
WP_085759510.1\|3295925_3297503_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	6.1e-18	30.9
WP_085759511.1\|3297542_3298031_+\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	6.9e-05	30.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019343

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection