CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP008743	Candidatus Nucleicultrix amoebiphila FS5, complete genome	2 crisprs	cas3,PD-DExK,DEDDh,WYL	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008743_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008743_1

269240-269351

Orphan

Consensus_repeat	Method
CCCTGCGAGGCCCCTTGGCCGCGGCAGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008743_1

>merge|NZ_CP008743|1|269240-269351|CRISPRCasFinder
CCCTGCGAGGCCCCTTGGCCGCGGCAGTCCATATTGCTTATTTAACTGGATCACGTCGCTTCGCTCGTGATGACAAGAGAGGCCCCTGCGAGGCCCCTTGGCCGCGGCAGTC

>NZ_CP008743|1|1|269240-269351|CRISPRCasFinder
CCCTGCGAGGCCCCTTGGCCGCGGCAGTC	CATATTGCTTATTTAACTGGATCACGTCGCTTCGCTCGTGATGACAAGAGAGGC
CCCTGCGAGGCCCCTTGGCCGCGGCAGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008743.1\|WP_085783568.1\|274052_275093_-\|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	unknown	unknown	gnl\|CDD\|234858
NZ_CP008743.1\|WP_085783570.1\|275689_277978_-\|outer-membrane-protein-assembly-factor-BamA	unknown	unknown	gnl\|CDD\|274514
NZ_CP008743.1\|WP_085783556.1\|264862_265630_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008743.1\|WP_085783567.1\|273579_274056_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	unknown	unknown	gnl\|CDD\|234568
NZ_CP008743.1\|WP_085783552.1\|258800_260957_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226685
NZ_CP008743.1\|WP_085783555.1\|263514_264795_-\|DUF3570-domain-containing-protein	unknown	unknown	gnl\|CDD\|378811
NZ_CP008743.1\|WP_085783566.1\|272770_273583_-\|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase	unknown	unknown	gnl\|CDD\|235390
NZ_CP008743.1\|WP_085783563.1\|270373_270826_+\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	unknown	unknown	gnl\|CDD\|376840
NZ_CP008743.1\|WP_085783565.1\|271944_272799_-\|LpxI-family-protein	unknown	unknown	gnl\|CDD\|226025
NZ_CP008743.1\|WP_157111100.1\|266997_268197_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|130895
NZ_CP008743.1\|WP_085783571.1\|277993_279118_-\|RIP-metalloprotease-RseP	unknown	unknown	gnl\|CDD\|308008
NZ_CP008743.1\|WP_085783558.1\|266279_267005_-\|acetoacetyl-CoA-reductase	unknown	unknown	gnl\|CDD\|273823
NZ_CP008743.1\|WP_085783562.1\|269463_270366_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|183142
NZ_CP008743.1\|WP_157111101.1\|268311_268482_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008743.1\|WP_085783557.1\|265773_266274_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP008743.1\|WP_085783554.1\|262312_263221_-\|FAD:protein-FMN-transferase	unknown	unknown	gnl\|CDD\|376782
NZ_CP008743.1\|WP_085785041.1\|263239_263449_-\|DUF4266-domain-containing-protein	unknown	unknown	gnl\|CDD\|379460
NZ_CP008743.1\|WP_085783564.1\|270758_271964_-\|lipid-A-disaccharide-synthase	unknown	unknown	gnl\|CDD\|234580
NZ_CP008743.1\|WP_085783569.1\|275105_275678_-\|OmpH-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|214922
NZ_CP008743.1\|WP_085783553.1\|260968_262267_-\|DUF3570-domain-containing-protein	unknown	unknown	gnl\|CDD\|378811

Protein	Function_ID	Function_description	E-value
NZ_CP008743.1\|WP_085783568.1\|274052_275093_-\|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	gnl\|CDD\|234858	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional.	1.40388e-138
NZ_CP008743.1\|WP_085783570.1\|275689_277978_-\|outer-membrane-protein-assembly-factor-BamA	gnl\|CDD\|274514	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein. Members of this protein family are the YaeT protein of the YaeT/YfiO complex for assembling proteins into the outer membrane of Gram-negative bacteria. This protein is similar in sequence and function to a non-essential paralog, YtfM, that is also in the Omp85 family. Members of this family typically have five tandem copies of the surface antigen variable number repeat (pfam07244), followed by an outer membrane beta-barrel domain (pfam01103), while the YtfM family typically has a single pfam07244 repeat. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP008743.1\|WP_085783567.1\|273579_274056_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	gnl\|CDD\|234568	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ.	1.44122e-85
NZ_CP008743.1\|WP_085783552.1\|258800_260957_-\|hypothetical-protein	gnl\|CDD\|226685	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion].	7.63194e-79
NZ_CP008743.1\|WP_085783555.1\|263514_264795_-\|DUF3570-domain-containing-protein	gnl\|CDD\|378811	pfam12094, DUF3570, Protein of unknown function (DUF3570). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 396 to 444 amino acids in length.	9.95068e-53
NZ_CP008743.1\|WP_085783563.1\|270373_270826_+\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	gnl\|CDD\|376840	pfam02590, SPOUT_MTase, Predicted SPOUT methyltransferase. This family of proteins are predicted to be SPOUT methyltransferases.	3.80582e-65
NZ_CP008743.1\|WP_085783565.1\|271944_272799_-\|LpxI-family-protein	gnl\|CDD\|226025	COG3494, COG3494, Uncharacterized protein conserved in bacteria [Function unknown].	4.66678e-69
NZ_CP008743.1\|WP_157111100.1\|266997_268197_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|130895	TIGR01836, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. [Fatty acid and phospholipid metabolism, Biosynthesis].	3.59004e-30
NZ_CP008743.1\|WP_085783571.1\|277993_279118_-\|RIP-metalloprotease-RseP	gnl\|CDD\|308008	pfam02163, Peptidase_M50, Peptidase family M50.	5.18342e-78
NZ_CP008743.1\|WP_085783558.1\|266279_267005_-\|acetoacetyl-CoA-reductase	gnl\|CDD\|273823	TIGR01829, Acetoacetyl-CoA_reductase, acetoacetyl-CoA reductase. This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.	1.89477e-128
NZ_CP008743.1\|WP_085783562.1\|269463_270366_+\|EamA-family-transporter	gnl\|CDD\|183142	PRK11453, PRK11453, O-acetylserine/cysteine exporter.	4.3786e-44
NZ_CP008743.1\|WP_085783566.1\|272770_273583_-\|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase	gnl\|CDD\|235390	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase.	3.17213e-145
NZ_CP008743.1\|WP_085783557.1\|265773_266274_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	2.01141e-39
NZ_CP008743.1\|WP_085783554.1\|262312_263221_-\|FAD:protein-FMN-transferase	gnl\|CDD\|376782	pfam02424, ApbE, ApbE family. This prokaryotic family of lipoproteins are related to ApbE from Salmonella typhimurium. ApbE is involved in thiamine synthesis. It acts as an FAD:protein FMN-transferase, catalyzing the attachment of an FMN residue to a threonine residue of a protein via a phosphoester bond in such bacterial flavoproteins.	1.27951e-72
NZ_CP008743.1\|WP_085785041.1\|263239_263449_-\|DUF4266-domain-containing-protein	gnl\|CDD\|379460	pfam14086, DUF4266, Domain of unknown function (DUF4266). This presumed lipoprotein domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 50 amino acids in length.	1.38023e-22
NZ_CP008743.1\|WP_085783564.1\|270758_271964_-\|lipid-A-disaccharide-synthase	gnl\|CDD\|234580	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed.	7.00832e-148
NZ_CP008743.1\|WP_085783569.1\|275105_275678_-\|OmpH-family-outer-membrane-protein	gnl\|CDD\|214922	smart00935, OmpH, Outer membrane protein (OmpH-like). This family includes outer membrane proteins such as OmpH among others. Skp (OmpH) has been characterized as a molecular chaperone that interacts with unfolded proteins as they emerge in the periplasm from the Sec translocation machinery.	1.32978e-21
NZ_CP008743.1\|WP_085783553.1\|260968_262267_-\|DUF3570-domain-containing-protein	gnl\|CDD\|378811	pfam12094, DUF3570, Protein of unknown function (DUF3570). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 396 to 444 amino acids in length.	1.06329e-50

>NZ_CP008743.1|WP_157111101.1|268311_268482_-|hypothetical-protein
MDKKLEESIGLYLDVFEAYYQEMMLSPSFMTATEEFMKHAIDVWQEALEQGKAFNL
>NZ_CP008743.1|WP_157111100.1|266997_268197_-|alpha/beta-fold-hydrolase
MHLWAGALQTMMVSLLEKNVEPIFFSKQLLNAIQHIKKYPDQAKVIENLQRQAFERYGTFMQGAMEYYESPRNNAFVEAPTLLQVGSVRVKDYGQKYNLKAGTEKGVILFIPSLINRSHVFDIPEKNSLMAYLSKNGYRCLLVEWGNYSEEQKDFSLREYVLNYLKPLMSLSRQHFPDLPFYLTGYCMGGILGLGALMESKIDIDGIILMATPWDFSQRSFKNRSFLKLCARMVEIEIQHSGKVSGFFLNMLFHCLNPLAGIQKFRRFQNLEPAEKKKFVELEDWVNDCVDLAPKVAKECFVNWYLNNELAETSTLSSLKIDLESLDFPVLTVIPKNDRIIPEASALSLAKQLRQVTVLQPLLGHVGMITGRKAKKNVWQPLLSWLNTNQKITQWRKYG
>NZ_CP008743.1|WP_085783558.1|266279_267005_-|acetoacetyl-CoA-reductase
MAKRIALVTGGTRGIGAAISKELKNSGCTVAAIYHGNDDAAKKFKVETGINIYKWDVSDYKACSAGIAQVQRDLGSIDILVNNAGITKDAMFHKMTEEQWHVVMETNLSSCFNMTRLLIEPMRERQFGRIINISSINAQKGQIGQVNYSAAKAGMIGFTKALALENAKKGVTVNAIAPGYIETDMVRAVAPDVLDKIVAQIPVGRLGHPEEIARAVVFLASDDSSFITGSTFSLNGAQYLS
>NZ_CP008743.1|WP_085783557.1|265773_266274_+|TlpA-family-protein-disulfide-reductase
MITKCLTLQTIRYVFVGVFLFYSLPASATPNFTLPLLNQSGHISLSDYRGKVVLIDIWASWCGPCRVSFPLYDQLYKELKSKGFVILAINTDTDLNKAKEFLKATGVSYPILSDPDAQVVSQFNPSTMPYALLLDRQGNIVSTHGGFYEDTFESEIKPKVVELVNK
>NZ_CP008743.1|WP_085783556.1|264862_265630_-|hypothetical-protein
MRITKKIFPLIGFISLSIASLPVKAISYPQGTFSIKPLTMNFANMTFNLRKQDSIINGTSRNAYKGFRGLGFNESVRQGIGYSIELGLTALDDFEVFTVLGVSYETGISNVEVNPAVPAAASQRFLSFKSRTNFNAALGARYYFDWKKNWVPFISGSLGVDFQSPVKATALNTVAGPIIGDFTIQGSKALLKGAVLVGVDYRFDKRWAITFSTGAQYLQRTRSETTTNLSGINVRYKDGRNEWSMPVLVALKISF
>NZ_CP008743.1|WP_085783555.1|263514_264795_-|DUF3570-domain-containing-protein
MKKNEKKMSALSSLTAIAMTLPGIAFAQENAVLRPETALKYTHYDETKNRYQIDVYNGFLSVPITEKLALNLNFNRETMSGASTSLMAPGDFFGHGGSPNQLIEIKTGATIQDQRSEAKAKLLYKGEGFDYGVGTSYSVENDYRSTTLFGDTTLYFNKKNTAVTLAASLSGDNVDPSSKPPTISRLAATRVYWNMGHKNTQKYHLGVRQDLTKQSFIQQNFEYAVDTGFLSDPYKAIYIFGDARTAIRPGAIFLGAFSLDYDRRPNFREAYSAVTRYVHYLESFGSSAHFDYRFSANSWKIKSHTFTLAYYQPWETWEFNPSVRFYTQSEADFYGMAFTNAPGAPVPARPLLQNGNGSSDYRLASFGSINGEFRVSKNFTPDIKASILVGYNHRSYRYGFNSKDVQKNTGNLFATRYASISIKVLF
>NZ_CP008743.1|WP_085785041.1|263239_263449_-|DUF4266-domain-containing-protein
MSFVILGLLSVIFLQACTNIEPWERNYMAESHMLLDPYPLDSILSDHIYFSREGTSGGYGLGGGGCGCN
>NZ_CP008743.1|WP_085783554.1|262312_263221_-|FAD:protein-FMN-transferase
MNLTLYKYSFGCMGCPCALSLYSSTPQIAEKVVTAARYELDRLDQYYTDYADTSFTAEINRSAGRKEGIVVDDETAILLDYADECYRISDGLFDITAGVLKDVWNFKIKNPKLPEESRINDLLKRTGWDKVIWKKPRLTLPIKGMKLDFGGVVKEYAADFIANICRSHGIYYGLVDLGGDLGVIGPHPDGRPWGIGVQHPRKPGEEIAIIQLEGGGLASSGDYERCLEIEGTRYSHILNPKTGWPMEGLSAVSVVADLCIIAGSASTIAMLKGKEEGIQWLESTGLRYFCADLDGQPLSKLQ
>NZ_CP008743.1|WP_085783553.1|260968_262267_-|DUF3570-domain-containing-protein
MMKNKKKQTSLSSLTAIAMTLPGIASAQENSVLRPETALKYTHYDETKNRYQIDVYNGFLSVPITEKLAINLNFNRETMSGASPRMNASEAFLNPNASTHKLVEVKSGATIEDQRHEVKAKLIYKGDADYGLGSAYSIEKDYRSTTLFGDTTLYFNKKNTAVTLAVSLSGDNVDPSAKPPTLSLSLPSRVYWNMGHKNTQKYHLGVRQDLTKQSFIQQNFEYTVDTGFLSDPYKLIFTYGDARTSIRPGTLFVGPSLTFPVGFSIDYDRRPNFREAYSAVTRYVHYLESFGSSAHFDYRFSANSWKIKSHTFTLAYYQPWETWEFNPSVRFYTQSEADFYGMAFTNAPGAPFPARPLLQNGNGSSDYRLASFGSINGEFRVSKNFTPDIKASILVGYNHRSYRYGFNSKDVQKNTGNLFATRYASISIKVLF
>NZ_CP008743.1|WP_085783552.1|258800_260957_-|hypothetical-protein
MATHLRFVKKERNRHFSYLLIALLICLFPQESKGEVAQNKETTRFSQAQLITGKNSIGSESDIFVGLEIVTKPGWKTYWRSPGITGYPPKLNWDQSKNFESFRIYWPKPHRFYVRGIEAVGYLEKVLLPIKITLKNPKEAFHLGLRVNYLVCDIGNCVQEKASFNLDIPKGDGSISSENSLIETALKEVPHLDTGKGMTFERAILHAKSNEQILEVIAHKADGFKHPELFIESNNKIFFDLPQIALSKTATIAQFHIPVYENESKKKPPFENLADKMIILTLVDGNQAVETQKIVEPEGKPFIGYLLILLSAFIGGLILNFMPCVLPVLSLKVLGIVKSVGKPKATIRKEFFATVLGILSSFVILALIAILLKELGHAVGWGLQFQQPIFLLAMIFILTLIACNLWGFYEITTPAFMSRFLSGIGLSSTGLESHFFTGLLVTVLATPCTAPFLATALGFALSRGSLEILIIFMFMGLGLSSLYIIFMAFPQLIQRLPKPGSWMVWLKNIFGGFLILTAGWLFISLTYLKGYVISALTAVLMLVVVLILSQLSKIRHSKKLYVWMFVGAVGFTITVLPYIIGAQNPHKHLEAPWQPFEPEKIARLVNEDKIVLVDVTADWCLTCKTNETFAFKREKVRKWLSNEKVVAMQADWTAPNEAIEAYMKQFNVYGIPLTIVYGKNFPDGIKLPQILTPEIIKKFLNKASDRPIIALQDVQSAN
>NZ_CP008743.1|WP_085783562.1|269463_270366_+|EamA-family-transporter
MAFTHILMALAVCFLWGCNFIAIKYSYESFPPFASLTIRFILTLIPLIFFVPRPKCSWGLLFKISLFQWIGQFGMSYSAIYLGLTPGLTALLLQSHIIFTLLISIFFYQYKPQMIELLGICIAVLGFSLIGSQIDGAIFIGGFLCVLFAGLSIACSTMILRGQRNLNMFQIIIWSCIFPILPMYGLSWFFEGPQAVFEGFSKLTVNAGISLLYTAYFSTIVATPLWGILLKNYEPAKITPFMLLIPVFAMISSYFAFGETLTTTSILASALTIIGLFVNQLSRRLTNRFITAKESRIEKA
>NZ_CP008743.1|WP_085783563.1|270373_270826_+|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH
MKISILSVGSFKTSPFIPLIKEYLTRINYTVQFIEIEFKKKVHGQKTHEALLIQKALPSNAYIVALDEKGKHMTSPELAKHFEDQQVKGHSHFVFIIGGADGLAQEILSNADLHLSFGRLTWPHQMVRLMLLEQIYRVQQILSGHPYHRA
>NZ_CP008743.1|WP_085783564.1|270758_271964_-|lipid-A-disaccharide-synthase
MMKKSLKVYIVAGEPSGDILGGHLMAALNKLTSVRFFGVGGTHMKEAGLNSLFPMADLSIMGIFEVIPHIPRILKRLNQTYQDAIDKKPDVVVTIDSPGFCLRLARKLKKSGIPVIHYSLPTVWAWRRGRAKKCRHVLTHALALLPMEPPYFEVEGLPTTFVGHPLVEAHIEEADGSLFRKRHKIPPSATVLCLLPGSREGEITKLLPTFSETIKKLKKQIPNLFVVVQTFEKYIPLIEKHRKTWECPSVISVNSAEKYQGMKASNFALAASGTVAIELALAQIPMVIGYKINPLTYWIVRSMVYVRHVCLVNILLNRSIVPECLQDACSACKLSEKLLGILKNPQQQLEAFVKFKQMLRYRDEIPSVRAAKTILKVLEIKPDDKDVHSKSAERDKSALKA
>NZ_CP008743.1|WP_085783565.1|271944_272799_-|LpxI-family-protein
MVLMNSQPPKLAILCGRGALPERLAHFCVNEGRDYLILAFEGQADKEFISKHPHAWSSVGQIQQCLEILKDHQVGELVFAGKFNRPSWAEIKPDRLGAQWMAKLVGKVFGDDSLLRGLIKLIEENSQIKVLSPESIIGHDLLAPRGVLGKVNPDESYFQDIIHGRKVAQTLGIVDVGQSVIVQQGLVIAVEAIEGTDNLIERSIPLLKKGPKGILVKMVKPQQDTRVDRPTIGLKTVEQSLKAGLGGIVMEAEGVILMQANDSIKLADREGLFLLGVTDDEEIS
>NZ_CP008743.1|WP_085783566.1|272770_273583_-|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase
MTANIHPSAIVEKSVQLGTNVEIGPFCHVSGNVTLDDEVKLHSHVVITGNTTIGKGTVIYPFASLGHRPQDLKYQGEPSTLTIGEKNMIREYVTMQPGTEGGGMKTLVGNNGLYMASCHVAHDCIIGNNVIMANNATLAGHVVVEDFAIIGGLAAVLQFVRIGRYAIVGGMSGVSHDVPPYASVRGEHAFLSGLNLVGLRRRGATRDEIQALQDAYQKIYSPLGTLEERIKKLVAESTNDKVSEVVQFIMKDTKRKLCAPKNGLDELAAS
>NZ_CP008743.1|WP_085783567.1|273579_274056_-|3-hydroxyacyl-ACP-dehydratase-FabZ
MTMTATNLNYESLDIEQIKKLIPHRYPMLMVDRIEKIQSDESAVGIKGVTVNEPFFQGHFPNYPVMPGVLIVEAMAQTAGVIVSKFLKSEDKEKLVYFMSIDEARFRKPVLPGHVLELHVTKIQNRRNVWKYKGEAKVDGVLHAEAIFTAMISVSEAK
>NZ_CP008743.1|WP_085783568.1|274052_275093_-|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase
MIDHNFFEYKGPLPLSAILSLTDIKEVRYGQGVTKDTSVGGIARLDEAQATHLAMLHNKKYISQLQSTHAGFCFVEPDMVQHCPETTTALITRSPYRCFGIVADAFYPHHESRFSIQETAIHPTAKIGENCVIEYGAVIQANAEIGSGTKIGANAVIGPRVKIGKNCLISAGVRICFSIIGDHVVIYQGTCIGQSGFGFFMDEKGHVKVPQLGRVIIEDHVEIGANTTIDRGSMDDTVIGKGSRIDNLVQIAHNVRLGQGCVIVAQVGISGSTRMGNYVIAAGQAGITGHLNIGSRAKIAAQSGVMRDILEGEAVAGSPAVPVKQWHRQTISLAHMVSATKKRGSQ
>NZ_CP008743.1|WP_085783569.1|275105_275678_-|OmpH-family-outer-membrane-protein
MKTMTIKTILRAFLVILFGTQIIHAEKDNSAKPLKIAILDFNRVLQESNAAIEVRKEIDGYRAQFQDEIQKIEDQLRDLEKTLQTEAQKKLSQEIESKRSDFEKRVSEVQEKTTERSSQLGKALDDAFNTIQEKIKEILIEISERDHLTMVFPKSVVILHEPDVEITQEVLTKLNTVLPKVKVVIPGISK
>NZ_CP008743.1|WP_085783570.1|275689_277978_-|outer-membrane-protein-assembly-factor-BamA
MRIFKAGAFYIALTMFASMHPCTSVIAQEFSGSIINQIEIEGNKRIHKETIVARQNLRIGNSYTKRMLDDSLKSLYATEWFEHVTLEVDNGILKISVVENPTVNQVGIEGNNEISDEIIKSELKLKPLEVFTSTRVKNDTKRVQDLYRLKGYFSALVTPKVVKKDQNRVDVVFEVQEGEATKVSKIFFIGNKKFNEGKLESVIQTKESRWYRFFTSDAYYDPDRLGYDRELLRKFYLEHGYADFRVKSAVAELTPDQKEFFITFTIEEGERYTFGDIEVASEIEDVKADSLKKLLTMSSGDWYNSKLVEKNITLLTDSLGNSGYAFVDINPKIEKDEENHIVKLTFQIEEGPRVYINKIIIIGNTRTDEDVIRREFRFYEGDAFNTSKLKDSEKRLKNLGHFKDLKIKKEPTLEPDKIDIIVDVEEERTGELSVGGGFSTIDGPLFETRFNERNFRGRGQDLSVSFTLARRSNSFDIGFTEPYFLNRELAAGIDLYRTEQKQQQNESYRQRIYGTTLRLGYRLTEDIIQKVYYSLRRDEVFGISQNASRYIKEQAGINTVSAMGHDVVYDQRDSALDPTEGYFLGFGNDLAGVGGTVRYFKTRVFGGYFYPVHDDWVLAFVGRGGMMNRLGKNVRIVDRFALGGDSLRGFEIQGVGPRDLTTNDSMNGLRYFTGTAELTFPVGLPNEFSVKGAVFTDVGSLWYTGESNVNVVDKASLRAAVGAGIRWKTPFLGTIRVDFAKAVKKEKYDRTQFILFGFSTRF
>NZ_CP008743.1|WP_085783571.1|277993_279118_-|RIP-metalloprotease-RseP
MDILQTLYVNLIPFILILSLLVFVHELGHYLVAKWNGVKVEVFSIGFGREILGWTDRSGTRWKISWLPLGGYVRMFSDLNAASQPDTKTIKEMSDEEKKMSLFHKTVWQRIAVSAAGPLANYLFAILIFGIIYIVSGQRMPSTEAKIGFIMPSSPAAEAGLKVGDKVLSVNDKNVTTFSELHDIIVKSPDVQLHLKIDRLGENLTISVKPTVVEIKDQKIGRLGIQQGFDQVKRPFYSAFGYALHDVIHVSYATLESVGRIIVRKQSADGLSGPIGIATTIGEVAQKNWIDLIWLTAFLSLNLGLINLFPVPMLDGGHLLFYFIEAVRGKPLSEKAQEIGFRIGFALLMGLVLLTTWNDLSRFKFFMYIKNLFN

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Crispr_ID: NZ_CP008743_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008743_2

1286000-1286112

Orphan

Consensus_repeat	Method
CTGGATCACGTCGCTACGCTCGTGATGACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008743_2

>merge|NZ_CP008743|2|1286000-1286112|CRISPRCasFinder
CTGGATCACGTCGCTACGCTCGTGATGACGGACATTGCTTCTGCGAGGCCCCTTGGCCGCGGCAGTCCATCTTGCTTATTTAACTGGATCACGTCGCTTCGCTCGTGATGACG

>NZ_CP008743|2|2|1286000-1286112|CRISPRCasFinder
CTGGATCACGTCGCTACGCTCGTGATGACG	GACATTGCTTCTGCGAGGCCCCTTGGCCGCGGCAGTCCATCTTGCTTATTTAA
CTGGATCACGTCGCTTCGCTCGTGATGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008743.1\|WP_085784515.1\|1282399_1283404_+\|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|366736
NZ_CP008743.1\|WP_085784513.1\|1280690_1281440_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP008743.1\|WP_085784516.1\|1283439_1284858_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008743.1\|WP_085784512.1\|1280065_1280635_+\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl\|CDD\|376665
NZ_CP008743.1\|WP_085783673.1\|1289153_1289807_-\|IS1595-family-transposase	unknown	unknown	gnl\|CDD\|372298
NZ_CP008743.1\|WP_085784517.1\|1285099_1285942_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008743.1\|WP_085784514.1\|1281439_1282396_+\|electron-transfer-flavoprotein-subunit-alpha	unknown	unknown	gnl\|CDD\|224936
NZ_CP008743.1\|WP_085784519.1\|1287053_1288007_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_CP008743.1\|WP_085784509.1\|1276496_1276817_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008743.1\|WP_085784518.1\|1286223_1286964_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP008743.1\|WP_085784524.1\|1291411_1292539_+\|DUF4424-domain-containing-protein	unknown	unknown	gnl\|CDD\|373054
NZ_CP008743.1\|WP_085784520.1\|1287999_1288593_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008743.1\|WP_085784521.1\|1289842_1290154_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008743.1\|WP_085784522.1\|1290150_1290543_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008743.1\|WP_085784510.1\|1276860_1277400_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008743.1\|WP_085784511.1\|1277797_1279783_-\|DNA-topoisomerase-IV-subunit-B	unknown	unknown	gnl\|CDD\|235501
NZ_CP008743.1\|WP_085784525.1\|1292872_1293169_+\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198395
NZ_CP008743.1\|WP_085784526.1\|1293251_1293602_-\|DUF3147-family-protein	unknown	unknown	gnl\|CDD\|181745
NZ_CP008743.1\|WP_085785078.1\|1279857_1280106_+\|HIG1-domain-containing-protein	unknown	unknown	gnl\|CDD\|368011
NZ_CP008743.1\|WP_085784523.1\|1290670_1291276_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP008743.1\|WP_085784515.1\|1282399_1283404_+\|aminoglycoside-phosphotransferase-family-protein	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	1.69914e-14
NZ_CP008743.1\|WP_085784513.1\|1280690_1281440_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	3.07555e-90
NZ_CP008743.1\|WP_085784512.1\|1280065_1280635_+\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl\|CDD\|376665	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase. Cobalamin adenosyltransferase This family contains the gene products of PduO and EutT which are both cobalamin adenosyltransferases. PduO is a protein with ATP:cob(I)alamin adenosyltransferase activity. The main role of this protein is the conversion of inactive cobalamins to AdoCbl for 1,2-propanediol degradation.The EutT enzyme appears to be an adenosyl transferase, converting CNB12 to AdoB12.	4.6851e-83
NZ_CP008743.1\|WP_085784524.1\|1291411_1292539_+\|DUF4424-domain-containing-protein	gnl\|CDD\|373054	pfam14415, DUF4424, Domain of unknown function (DUF4424). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 310 and 361 amino acids in length.	2.22179e-76
NZ_CP008743.1\|WP_085784519.1\|1287053_1288007_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	1.63706e-22
NZ_CP008743.1\|WP_085784514.1\|1281439_1282396_+\|electron-transfer-flavoprotein-subunit-alpha	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	3.50559e-120
NZ_CP008743.1\|WP_085784518.1\|1286223_1286964_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	6.14072e-05
NZ_CP008743.1\|WP_085784526.1\|1293251_1293602_-\|DUF3147-family-protein	gnl\|CDD\|181745	PRK09272, PRK09272, hypothetical protein; Provisional.	3.44035e-22
NZ_CP008743.1\|WP_085783673.1\|1289153_1289807_-\|IS1595-family-transposase	gnl\|CDD\|372298	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain. This domain probably functions as an integrase that is found in a wide variety of transposases, including ISXO2.	2.77961e-38
NZ_CP008743.1\|WP_085784511.1\|1277797_1279783_-\|DNA-topoisomerase-IV-subunit-B	gnl\|CDD\|235501	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed.	0
NZ_CP008743.1\|WP_085784525.1\|1292872_1293169_+\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198395	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria. The family includes a group of uncharacterized bacterial proteins with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	9.54052e-46
NZ_CP008743.1\|WP_085785078.1\|1279857_1280106_+\|HIG1-domain-containing-protein	gnl\|CDD\|368011	pfam04588, HIG_1_N, Hypoxia induced protein conserved region. This family is found in proteins thought to be involved in the response to hypoxia. Family members mostly come from diverse eukaryotic organisms however eubacterial members have been identified. This region is found at the N-terminus of the member proteins which are predicted to be transmembrane.	5.35345e-07

>NZ_CP008743.1|WP_085784517.1|1285099_1285942_+|hypothetical-protein
MRLSQVFFVFLLVSGIGFGSRASEPLFESISYEVSSKTYVIKSQQGETFRVIDDQKAYNALVSSRFSYVADHKEALPNSQAFDVDPAKSLYLDTDWRAITNATLSRPILVTNYLYNCVGIVLRDSQRQKVGLFHLSPYKLGATTDVYVEEFMQDSEVKNVEAMLISGRLSDNLTRCYTALTQKGIKITTLHTLPYILLDECEVFSKSVFADSKALLESPEKLMSVLRDAFLRVAVDARTMTVSFTFDFEAFDRLYSQEGGTLKKAEAAKAAGVHVRFSEE
>NZ_CP008743.1|WP_085784516.1|1283439_1284858_-|hypothetical-protein
MKLTLKKDRSIKNGLQITFALALMMSSSAYATKRTFTETLTADEKSQVTSVPNRKAPPAKKSRVQAFKETVLHHKGKVAFGAAVLSAGACELLYPGSVSGRVISAFGMLTTGLGGLFGSNTQLENTPNATPSTQTHPEPCLEPITFEEAQKLYGLRSDGSYLARMPESEPTSDSLSVLDRMGREIASKSGMSFSEGEVLPKGEGIMHFIPRSAIVPSPSSALVPTTFVDDTAVGTFVQMPTFQMPTVEREPLNFMRPNSVTLAQGFESSLPHFVQMPTFTLAPVSESVQGDVSTAVTLYQAPETFGSEGSTALQSVSFSQEFKAPEENTHTTSGHPNAESEQKSEQSEEKTYESEDRRQKAKGNYRSSSARSNPYTPYRRLLEDAFVAMMVGPIKPLSNTTAVHTPDVDEEEEEEGVVMFPQSPRMIDEEEFSLQQEAMAQENTTSFHTSAFEGDDSASSDDEDGDDENNGK
>NZ_CP008743.1|WP_085784515.1|1282399_1283404_+|aminoglycoside-phosphotransferase-family-protein
MDDPILKSHWERFKDHVYLDKALAQKLLHPFIPDTLETLHILSEGCANTNYKVSFKTAHPPVVIRIYVREKSALKRELAIHKKVAGTLPVPHYLYADDSCSLYTHPYAIVEWIEGIMMRDIVLQKDEKAISECTFDAGLYLNELRHITLPKGGFFQEDFQIRPFQEDEKYLPYVTMLLNDPIVIKSLGPELHHGTQKLVRDYAALLPFEDDANLTHGDYDPANMLVKEVKGVWKIAAILDWEFSFAGPYLLDIGMMLRYSHKLPKCYEESFIKGIESSGNLLPQEWKRQAKLMDLLCLLQLIHHNPYDQRPKMNRDVVSLVTHTVSHWAMMQKK
>NZ_CP008743.1|WP_085784514.1|1281439_1282396_+|electron-transfer-flavoprotein-subunit-alpha
MSVLVIAEHDHKNLKPATLHVVTAALTIDPSVIVCIVGDQIQKIGEEAQKIEGVEKVLLLSHPALKNFLAEPVTEALKNIAATYSHILAPSTTFAKNFMPRLAALLGVGQISDVMAVESPSVFQRPIYAGNAIATVESSDPIKVMTVRTTTFPRAHGGKGSATLETVSLQDIKEAGSTYVDTLASVSARPELTAARVVVSGGRGLQSKDNFKIIEELADLLGAAIGASRAAVDAGYISNDHQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKIIVAINKDEDAPIFQIADFALVGDLFHLIPELTQALRSLKAKAS
>NZ_CP008743.1|WP_085784513.1|1280690_1281440_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MKILVAVKRVIDYNVKARVKSDQSDVDLTNVKMAMNPFDEIAVEEAVRLKEKNIATEIVVVSIGPSQAQETLRSALALGADKAILVESDQPTEPLIVAKILQKLIDREQPQLVILGKQAIDDDCNQTGQMLAGLLSWPQGTFISELKIENAQAHITREVDGGLEKLKLSLPAVLTTDLRLNVPRYPALPNIMKAKQKPLETLAMSTLGVDAKRSQKILKVSEPAQRKKGIRVASVEDLIQKLHQEAGVI
>NZ_CP008743.1|WP_085784512.1|1280065_1280635_+|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MVLLTRIYTKTGDKGKTALGDGSRVSKCDLRVDVIGTVDEANATLGLARLHVREKYDLVLARIQNDLFDMGADLCLPQNANNDQALRIQKSQVERLEKEIDQMNTELEPLRSFVLPGGSAVSAHLHLARTVVRRAERIYFALISHDNTLNPEIGRYLNRLSDHLFVMGRYLNNHGKHDVLWDPGANLKG
>NZ_CP008743.1|WP_085785078.1|1279857_1280106_+|HIG1-domain-containing-protein
MSMILLVIVIAGILATLISLGLGVFNLITSRGEKKRALLSNKLMRWRIIFQVITLIIFTALLIFTKKSHHGPTDTHIHQDGR
>NZ_CP008743.1|WP_085784511.1|1277797_1279783_-|DNA-topoisomerase-IV-subunit-B
MKDLFDSVSHTPSDYSAKDIEVLEGLEPVRRRPGMYVGGTDENALHHLFSEVIDNAMDEAVAGHASWIEVVFSADGFLSVRDNGRGIPIDRHPKFPDKSALEIIMTTLHSGGKFSGKAYKTAGGLHGVGVSVVNALSEALEVHVFIKGKEWEMAFSRGLMTQPLTAVGATKSENGTLVRFKPDPEIFGEESHFRPEKLYKMARSKAYLFKGVEIRWHCDPALLEPESKIPTKDVLHFPGGLADYLKEALSEESLIIKEVFSGSAKFNDGSGQVEWAMAWPVMGDGFFSSYCNTISTPLGGSHEAGFRQALTKAIKSYGERLSLKKASHLTAEDCVDGTAVMLSVFIRDPHFQGQTKEKLVTPGVTRLVEGVVKDMADHWLSDHKEAAQVLLNALIERMEDRLRRRHEKETQRQTATRRLRLPGKLADCLSESREETELFLVEGDSAGGSAKQARDRKTQAVLPLRGKILNVASASTDKLLGNQELKDLSLALGCGTGKDCRPEKLRYGRIIIMTDADVDGAHIASLLMTYFYLEMRPLLEQGHIYLALPPLYRLSQGSKSAYARDDEDKERLLKTFRGKVDISRFKGLGEMAWNQLKETTMDPKQRQILKVRLPETVMDETLPDTPIIPLAEFVDNLMGRRPEKRFSFIQSRAHFAYNLDV
>NZ_CP008743.1|WP_085784510.1|1276860_1277400_-|hypothetical-protein
MKKYLLISTALFSLSLGLTQVHASDIKEESAVKRVGRSVVRKVVGAATVGSVAAATSFGKDEYKTYTSSSVFIREEVDQNIPFVTPTLTSFGVARMQGYNWFDSALIATTTLGGSLFGASKQVLLDTFKFELPSSQNLALATGVGAGAGYFLGTVLVDGYHWLGSKILRKSTAKKKKDE
>NZ_CP008743.1|WP_085784509.1|1276496_1276817_+|hypothetical-protein
MLFFSHISFALLMIVLIMGTKLILKALNTKGPGQTLAKSVGIIVMVLAVLTMLCNLYYSVQYWARGYLDMPCPMMHMGQGMDHSSMMNQHMMDKNSMMGGMSQNKE
>NZ_CP008743.1|WP_085784518.1|1286223_1286964_-|GNAT-family-N-acetyltransferase
MRFGLIVSMLGLGVGAFQGDLKASYTSDQNWEEAYYEDYSTANTLPTLLLYRKGTEDEGPQQIGSLTKIKRKDAGPLEVLDDKLLSAHQYRPGFNLQKMVRLFEGNKRFSSIRGWTINLRDGDQDVPVGMIAYGHHRASYYDPRFPTWNTPFAFLEDKVCFEVEWYIRPDYQRRGLARSAVQAVVSYIREVDQGVTKMDYAMAMIAKSNGLSTKFAEALSFKFVGTDQDTNQYAWSFAVNPALQQN
>NZ_CP008743.1|WP_085784519.1|1287053_1288007_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MGESLNYLHHHSNFSDLLNIVGHKKNMDPALIEKDYWIMHCLYGLQKMGLSFQLKGGTSLSKGYQIIHRFSEDIDIRIEPLSGMTVYTGRNQNKPSHCNSRRDFYNALQKRIKIDGIDSVERDKNFDDEKFRSGGIRLLYHSRTSALTHLKEGILLEVGFDDVSPNKPRDITSWAYDHAVANRVPVKDNRARKVRCYDPGYTFVEKLQTISTKYRKITNKNSLPENFMRHYYDVYCLLKEPSILNFIGTADYHAHKKKRFRDADHKIIHENEAFTLTDPLIRNEFKHAYEKSRTLYYQGQPDFDEVVALIQKHSHQL
>NZ_CP008743.1|WP_085784520.1|1287999_1288593_-|hypothetical-protein
MRELDKLKKILRPGRVYRRADLEKYSKAVDRHLKLLVHEGALEKLSGGLYYCPKTTVFGTAPADDKKLVAAFLKSHKFLLTSPNAYNTLGVGTTQLYNETVVYNKKRHGTFTLGGRSFHFRMKPDFPAKLSPEFLLVDLINNLDRLAENKENVLKQVRKKITALKGRALDRAVSSYGGERTKKFFALSSSTGTVAHG
>NZ_CP008743.1|WP_085783673.1|1289153_1289807_-|IS1595-family-transposase
MYERKSRLRASQQSKLIEHFVAGTTARAASELIGIQANTAITFYRRLRKLIASKLPSYELSGEVEADESYFGGVRKGKRGRGAGGKVAVFGLLKRGGKVYTAIISDAKTDTLLPIIKEKVQPDSIVYTDTFRSYNALDISDFHHRRINHSQLFADKHNHINGIENFWNQAKRQMRKFNGIKKENFYWFLKECEWRFNGGNHRDLLTQLKSWYRATRH
>NZ_CP008743.1|WP_085784521.1|1289842_1290154_-|hypothetical-protein
MSLKKIYEILVRCCPVLGALIGTVLGALGTYWINTNVQRNEQKDQNKKLIISQYPSNLKDLRISFNDFHKKTTELSLKIDSTYGKIPPNVEQDFFQIKNKGLK
>NZ_CP008743.1|WP_085784522.1|1290150_1290543_-|hypothetical-protein
MQYISFILRFSFPLIWTIPIYAETKEECRAKCIASYQESTRPITMQTEVKVSREWLEKHIERKKLDRLSNADKKVGYDALLSYEEGFIAQPKTDHSIVLNPATASLQGNIEVSLDDLKKNLDACLKDCDK
>NZ_CP008743.1|WP_085784523.1|1290670_1291276_-|hypothetical-protein
MIDFSNFIKRSFILVFTLGLSLSNSEIVKASSSSSEEGPMPTVTARHERLRDAVTQAYNRARANLTQNTLRSLLGAIANEADYFIDLNAPLDNPHDDPRVAGTKKHAYAKQLFQDLGVFNNVKLEKNYGARGAYPAKLDVTLEDKGTNTIYVYDYKFGEAGFTDNKKGQYRNSLQTYIQTTSGWDKKKRLKVFFFEISPTH
>NZ_CP008743.1|WP_085784524.1|1291411_1292539_+|DUF4424-domain-containing-protein
MGLSSSSRRFLYAAFTVIGLGVLSYPARANDTSATVAGGGIHFKKSADISMDKEVLKISVDKIDIRYVFFNHADKEVHELIAFPLPLSPYGNAEDNWRVHPSWDEDYMARKLLDENPGSALDQHPSNCNLKCWLDNAAFINFERTVNGEKYGYNYRTQAFDPNGKDITNLLIKHKIPLSSAYLIGYMEEGALHQNKALQEKLKKLHLLDGKGNPLWKTQTTYFWQQYFKPQSETVVTHSYKPQAGYHWLTGKDIKTFDDIKIESRDLDEKSWRNYCVRPDDQAQILSYFKALRPDDSQVVRAMEVQYILSTGANWNGPIKDFTLEITPPTPDTIVAFCWPGAVEKSEMGTVIARAENFTPDKDLKVLFISLKPGI
>NZ_CP008743.1|WP_085784525.1|1292872_1293169_+|GIY-YIG-nuclease-family-protein
MIVLKLPAIYIVTNKRNGTLYTGVTSNLCQRIYHHKNAIISGFTQKYKCHLLVYYERFEDMETAILREKKIKSGSRHNKIKLIESLNPEWRDLYDEIF
>NZ_CP008743.1|WP_085784526.1|1293251_1293602_-|DUF3147-family-protein
MTYVILKVIISAVIIVSIAEISKRNALLGAMIASLPVVSVLALTWLYIDTKNTQKIIELSKNILILIIPSLSFFVFLIVLLKKEINYYLSLSLSLFLMVSFYFITVRLLKALNITS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

389634 : 447345

Klosneuvirus(13.33%)

protease,transposase,tail,portal,head,capsid,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085783653.1\|389634_391161_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	3.0e-99	38.6
WP_085783654.1\|391184_392231_-	hypothetical protein	NA	NA	NA	NA
WP_085783655.1\|392227_392872_-	dTMP kinase	M1PSC7	Streptococcus_phage	3.4e-36	40.0
WP_085783656.1\|392875_394003_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	1.3e-49	32.9
WP_085783657.1\|394015_395005_-	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	1.2e-16	54.7
WP_085783658.1\|395089_395899_-	YdcF family protein	NA	NA	NA	NA
WP_085783659.1\|396137_396719_-	mobile mystery protein B	NA	NA	NA	NA
WP_085783660.1\|396718_397180_-	mobile mystery protein A	NA	NA	NA	NA
WP_085783661.1\|397470_397851_+	hypothetical protein	NA	NA	NA	NA
WP_085783662.1\|397876_398188_-	hypothetical protein	NA	NA	NA	NA
WP_085783663.1\|398413_398821_+	hypothetical protein	NA	NA	NA	NA
WP_085783664.1\|398845_399223_+	hypothetical protein	NA	NA	NA	NA
WP_157111112.1\|399372_399543_+	hypothetical protein	NA	NA	NA	NA
WP_085783666.1\|400131_400908_+	hypothetical protein	NA	NA	NA	NA
WP_085783667.1\|400904_401783_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_085783668.1\|401850_402564_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_085783669.1\|402597_404349_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_085783670.1\|404445_405651_+	hypothetical protein	NA	NA	NA	NA
WP_085783671.1\|405924_410379_+	hypothetical protein	NA	NA	NA	NA
WP_157111113.1\|410618_411623_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_085783673.1\|411617_412271_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_085783674.1\|412290_412563_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_085783675.1\|412758_413235_+	Hsp20 family protein	A0A1B1IW69	uncultured_Mediterranean_phage	9.4e-23	42.6
WP_085783676.1\|413763_417414_+	vitamin B12-dependent ribonucleotide reductase	A0A1X9SGV9	Bradyrhizobium_phage	0.0e+00	53.9
WP_085783677.1\|417484_418072_+	TIGR00730 family Rossman fold protein	A0A1G5S9X4	Enterococcus_phage	2.4e-12	30.2
WP_085783678.1\|418112_418937_-	hypothetical protein	NA	NA	NA	NA
WP_085783679.1\|419083_419656_+	hypothetical protein	NA	NA	NA	NA
WP_085783680.1\|419700_420741_-	hypothetical protein	NA	NA	NA	NA
WP_085783681.1\|421067_421868_+	hypothetical protein	NA	NA	NA	NA
WP_085783682.1\|421880_423050_-	ribonuclease D	NA	NA	NA	NA
WP_085783683.1\|423174_424959_+\|tRNA	aspartate--tRNA ligase	A0A1V0SIS0	Klosneuvirus	3.5e-06	28.3
WP_085783684.1\|424961_425726_-	hypothetical protein	NA	NA	NA	NA
WP_085783685.1\|425725_426499_-	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA
WP_085783686.1\|426509_429011_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	8.1e-25	23.7
WP_085783687.1\|429132_429408_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5S8E8	Streptococcus_phage	8.3e-16	50.0
WP_085783688.1\|429400_429631_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_085783689.1\|429896_430577_-	DNA repair protein RadC	NA	NA	NA	NA
WP_085783690.1\|430649_430955_+	DUF167 domain-containing protein	NA	NA	NA	NA
WP_085783691.1\|430944_431343_-	hypothetical protein	NA	NA	NA	NA
WP_085783692.1\|431435_431927_-	transcription antitermination factor NusB	NA	NA	NA	NA
WP_085783693.1\|432213_433356_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_085783694.1\|433461_433914_-	HIT family protein	NA	NA	NA	NA
WP_085783695.1\|433935_435261_-	MFS transporter	NA	NA	NA	NA
WP_085783696.1\|435583_436603_+	porphobilinogen synthase	NA	NA	NA	NA
WP_085783697.1\|436599_436833_+	hypothetical protein	NA	NA	NA	NA
WP_085783698.1\|436836_437391_-	hypothetical protein	D4HTZ6	Vibrio_phage	1.3e-07	27.9
WP_085783699.1\|437394_437817_-	cell wall hydrolase	A0A1B0VMI2	Pseudomonas_phage	6.6e-20	42.1
WP_085783700.1\|437832_438357_-	hypothetical protein	NA	NA	NA	NA
WP_085783701.1\|438374_439259_-	hypothetical protein	NA	NA	NA	NA
WP_085783702.1\|439267_441016_-	hypothetical protein	NA	NA	NA	NA
WP_157111114.1\|441139_442141_+	EamA family transporter	NA	NA	NA	NA
WP_085783704.1\|442165_442690_-	hypothetical protein	NA	NA	NA	NA
WP_157111115.1\|442692_442860_-	hypothetical protein	NA	NA	NA	NA
WP_085783705.1\|442885_443284_-	hypothetical protein	NA	NA	NA	NA
WP_085783706.1\|443276_443651_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_085783707.1\|443679_444303_-	hypothetical protein	NA	NA	NA	NA
WP_085783708.1\|444358_445570_-\|capsid	phage major capsid protein	B0VK33	Azospirillum_phage	6.0e-74	46.9
WP_085783709.1\|445594_446137_-\|head,protease	HK97 family phage prohead protease	B0VK32	Azospirillum_phage	5.8e-29	47.2
WP_085785047.1\|446133_447345_-\|portal	phage portal protein	W8ECU7	Geobacillus_phage	4.9e-84	44.6

DBSCAN-SWA_2

796606 : 860206

Planktothrix_phage(16.67%)

protease,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085784057.1\|796606_798406_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_085784058.1\|798369_799404_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_085784059.1\|799662_800493_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.6e-20	39.4
WP_085784060.1\|800486_801125_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_085784061.1\|801134_801929_+	hypothetical protein	NA	NA	NA	NA
WP_157111137.1\|801935_802982_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_085784063.1\|803107_804049_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	7.7e-69	44.8
WP_085784064.1\|804064_804634_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_085784065.1\|804852_805545_-\|protease	TIGR02281 family clan AA aspartic protease	NA	NA	NA	NA
WP_085784066.1\|805541_806027_-	hypothetical protein	NA	NA	NA	NA
WP_085784067.1\|806095_806914_-	OmpA family protein	NA	NA	NA	NA
WP_085784068.1\|807292_808543_-	RsmB/NOP family class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_085784069.1\|808539_809235_-	RlmE family RNA methyltransferase	Q8JM43	Mamestra_configurata_nucleopolyhedrovirus	4.3e-08	27.0
WP_085784070.1\|809231_810275_-	Ppx/GppA family phosphatase	NA	NA	NA	NA
WP_085784071.1\|810701_812033_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_085784072.1\|812368_813079_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_085784073.1\|813146_814778_-	hypothetical protein	NA	NA	NA	NA
WP_157111138.1\|815234_816590_-	hypothetical protein	NA	NA	NA	NA
WP_085784075.1\|816875_817904_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_085784076.1\|817900_818626_+	metal ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.6e-16	30.8
WP_085784077.1\|818625_819414_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_085785057.1\|820399_820978_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_085784078.1\|820974_821784_+	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA
WP_085784079.1\|821874_822171_+	ETC complex I subunit	NA	NA	NA	NA
WP_085784080.1\|822180_822585_-	DUF2000 domain-containing protein	NA	NA	NA	NA
WP_085784081.1\|822581_823559_-	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_085784082.1\|823555_824701_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_085784083.1\|824839_826123_+	efflux RND transporter periplasmic adaptor subunit	S5VL44	Leptospira_phage	9.3e-17	27.9
WP_085784084.1\|826168_829279_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	6.2e-83	24.5
WP_085784085.1\|829296_830082_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_157111139.1\|830104_830995_+	hypothetical protein	NA	NA	NA	NA
WP_085784087.1\|830991_831801_+	MOSC domain-containing protein	NA	NA	NA	NA
WP_085784088.1\|831821_832748_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
WP_085784089.1\|832744_833413_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_085785058.1\|833494_834292_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_085784090.1\|834309_835044_-	hypothetical protein	NA	NA	NA	NA
WP_085784091.1\|835224_836586_-	S8/S53 family peptidase	NA	NA	NA	NA
WP_085784092.1\|836698_837679_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_157111140.1\|837759_838062_-	hypothetical protein	NA	NA	NA	NA
WP_085784094.1\|838197_840237_-	excinuclease ABC subunit UvrB	A7WKN6	Acidianus_filamentous_virus	4.0e-06	36.7
WP_157111199.1\|840229_841858_-	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.7e-20	34.3
WP_085784096.1\|841860_842895_-	ABC transporter permease	NA	NA	NA	NA
WP_085784097.1\|842895_844002_-	microcin C ABC transporter permease YejB	NA	NA	NA	NA
WP_085784098.1\|844008_845841_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_085785059.1\|845850_846363_-	cytochrome c family protein	NA	NA	NA	NA
WP_085784099.1\|846477_847887_-	DNA recombination protein RmuC	NA	NA	NA	NA
WP_085784100.1\|847995_849258_+	nucleoside:proton symporter	NA	NA	NA	NA
WP_085784101.1\|849244_849736_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_085784102.1\|849732_850587_-	hypothetical protein	NA	NA	NA	NA
WP_157111141.1\|850583_851162_-	AAA family ATPase	NA	NA	NA	NA
WP_085784103.1\|851347_852517_+	hypothetical protein	NA	NA	NA	NA
WP_085784104.1\|852623_853214_-	recombination protein RecR	NA	NA	NA	NA
WP_085784105.1\|853229_853553_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_085784106.1\|853578_854892_-	DNA polymerase III subunit gamma/tau	E7DN81	Pneumococcus_phage	3.5e-43	38.8
WP_085785061.1\|855215_855668_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_085785062.1\|855672_856548_-	RNA polymerase sigma factor RpoH	M4SMP8	Cyanophage	4.0e-19	31.0
WP_085784107.1\|856645_857611_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	1.9e-06	24.6
WP_085784108.1\|857674_859300_-	Do family serine endopeptidase	A0A1B1IT49	uncultured_Mediterranean_phage	5.1e-20	27.4
WP_085784109.1\|859342_860206_-\|protease	protease modulator HflC	NA	NA	NA	NA

DBSCAN-SWA_3

1073675 : 1080337

Acinetobacter_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085784298.1\|1073675_1075472_+	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	4.2e-100	36.1
WP_085784299.1\|1075468_1076653_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA
WP_085784300.1\|1076764_1077067_+	type II toxin-antitoxin system HigB family toxin	A0A0P0ZE17	Stx2-converting_phage	1.2e-18	48.4
WP_085784301.1\|1077056_1077461_+	hypothetical protein	A0A222YXG1	Escherichia_phage	1.8e-19	47.5
WP_085784302.1\|1077560_1077887_-	type II toxin-antitoxin system PemK/MazF family toxin	Q332J9	Clostridium_botulinum_C_phage	6.0e-05	28.7
WP_085784303.1\|1077880_1078132_-	hypothetical protein	NA	NA	NA	NA
WP_085784304.1\|1078382_1078694_+	HigA family addiction module antidote protein	A0A0M3LPV0	Mannheimia_phage	1.0e-06	35.7
WP_085784305.1\|1078690_1080337_+	STAS domain-containing protein	A0A2H4J153	uncultured_Caudovirales_phage	7.7e-40	26.8

DBSCAN-SWA_4

1807354 : 1815240

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085785000.1\|1807354_1808497_+	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-29	36.3
WP_085785001.1\|1808500_1809430_+	ABC transporter permease subunit	Q6GZ02	Mycoplasma_phage	3.2e-11	27.9
WP_085785002.1\|1809433_1810255_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_085785003.1\|1810260_1811109_+	ATPase	A0A222YXS3	Escherichia_phage	4.1e-05	28.5
WP_085785004.1\|1811121_1811550_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_085785005.1\|1811611_1812517_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	6.1e-63	44.4
WP_085785006.1\|1812517_1813861_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	4.2e-84	41.7
WP_085785007.1\|1813863_1815240_+	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	1.3e-56	33.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP008743

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection