CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019948	Methylocystis bryophila strain S285 chromosome, complete genome	3 crisprs	csa3,cas3,DEDDh,WYL	1	1	2	0
NZ_CP019949	Methylocystis bryophila strain S285 plasmid p1, complete sequence	0 crisprs	RT	0	0	13	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019948_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019948_1

1402045-1402134

Orphan

Consensus_repeat	Method
GCGCCGTGGCGATCGGCGGCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019948_1

>merge|NZ_CP019948|1|1402045-1402134|CRISPRCasFinder
GCGCCGTGGCGATCGGCGGCGGCGCCTCCAACGGCAACGGCGCATCTGTCTCCGCCAACTCCGTTGGCGGCGTGGCGATCGGCGGCGGCT

>NZ_CP019948|1|1|1402045-1402134|CRISPRCasFinder
GCGCCGTGGCGATCGGCGGCGGC	GCCTCCAACGGCAACGGCGCATCTGTCTCCGCCAACTCCGTTG
GCGGCGTGGCGATCGGCGGCGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019948.1\|WP_085773558.1\|1404338_1405817_+\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP019948.1\|WP_085770874.1\|1414932_1415313_-\|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl\|CDD\|272875
NZ_CP019948.1\|WP_085773557.1\|1395299_1396151_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP019948.1\|WP_158658632.1\|1400076_1400445_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019948.1\|WP_085770875.1\|1415328_1415517_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|237510
NZ_CP019948.1\|WP_085773556.1\|1394114_1395011_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|226163
NZ_CP019948.1\|WP_085770870.1\|1411460_1412033_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP019948.1\|WP_085770860.1\|1393876_1393966_-\|methanobactin	unknown	unknown	unknown
NZ_CP019948.1\|WP_085770865.1\|1403609_1404179_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019948.1\|WP_158658631.1\|1398754_1399870_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197715
NZ_CP019948.1\|WP_085770857.1\|1389357_1391046_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235704
NZ_CP019948.1\|WP_102938176.1\|1413383_1414880_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226132
NZ_CP019948.1\|WP_085770867.1\|1408824_1409781_+\|metallo-mystery-pair-system-four-Cys-motif-protein	unknown	unknown	gnl\|CDD\|188567
NZ_CP019948.1\|WP_085770859.1\|1392962_1393793_-\|methanobactin-biosynthesis-cassette-protein-MbnB	unknown	unknown	gnl\|CDD\|200410
NZ_CP019948.1\|WP_085770861.1\|1396347_1398627_+\|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|273676
NZ_CP019948.1\|WP_085770872.1\|1412343_1412742_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019948.1\|WP_158658912.1\|1392400_1392934_-\|methanobactin-biosynthesis-cassette-protein-MbnC	unknown	unknown	gnl\|CDD\|274952
NZ_CP019948.1\|WP_102938175.1\|1409918_1410950_+\|di-heme-enzyme	unknown	unknown	gnl\|CDD\|188554
NZ_CP019948.1\|WP_085770858.1\|1391099_1392389_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223608
NZ_CP019948.1\|WP_158658633.1\|1406203_1408720_+\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|273805

Protein	Function_ID	Function_description	E-value
NZ_CP019948.1\|WP_085770874.1\|1414932_1415313_-\|iron-sulfur-cluster-assembly-accessory-protein	gnl\|CDD\|272875	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein. Proteins in this subfamily appear to be associated with the process of FeS-cluster assembly. The HesB proteins are associated with the nif gene cluster and the Rhizobium gene IscN has been shown to be required for nitrogen fixation. Nitrogenase includes multiple FeS clusters and many genes for their assembly. The E. coli SufA protein is associated with SufS, a NifS homolog and SufD which are involved in the FeS cluster assembly of the FhnF protein. The Azotobacter protein IscA (homologs of which are also found in E.coli) is associated which IscS, another NifS homolog and IscU, a nifU homolog as well as other factors consistent with a role in FeS cluster chemistry. A homolog from Geobacter contains a selenocysteine in place of an otherwise invariant cysteine, further suggesting a role in redox chemistry. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.24442e-21
NZ_CP019948.1\|WP_158658633.1\|1406203_1408720_+\|TonB-dependent-siderophore-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	1.73084e-73
NZ_CP019948.1\|WP_085770870.1\|1411460_1412033_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	2.47578e-25
NZ_CP019948.1\|WP_085770875.1\|1415328_1415517_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|237510	PRK13795, PRK13795, hypothetical protein; Provisional.	1.94961e-09
NZ_CP019948.1\|WP_085773556.1\|1394114_1395011_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|226163	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane].	4.54416e-10
NZ_CP019948.1\|WP_085773558.1\|1404338_1405817_+\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	8.47967e-62
NZ_CP019948.1\|WP_085773557.1\|1395299_1396151_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.67675e-25
NZ_CP019948.1\|WP_085770857.1\|1389357_1391046_-\|hypothetical-protein	gnl\|CDD\|235704	PRK06126, PRK06126, hypothetical protein; Provisional.	1.42116e-90
NZ_CP019948.1\|WP_102938176.1\|1413383_1414880_+\|GAF-domain-containing-protein	gnl\|CDD\|226132	COG3604, FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms].	1.26699e-161
NZ_CP019948.1\|WP_085770867.1\|1408824_1409781_+\|metallo-mystery-pair-system-four-Cys-motif-protein	gnl\|CDD\|188567	TIGR04052, hypothetical_protein_MettrDRAFT_3899, AZL_007920/MXAN_0976 family protein. Members of this rare protein family regularly occur next to a member of the MXAN_0977 subfamily (TIGR04039) of the di-heme cytochrome c peroxidase/MauG family (pfam03150). MauG itself (TIGR03791) is a protein modification enzyme responsible for the tryptophan tryptophylquinone (TTQ) modification involved in methylamine dehydrogenase activation. All members of this family have a motif of four spaced invariant Cys residues, while additional homologs outside the scope of this family lack the four Cys residues.	1.71198e-88
NZ_CP019948.1\|WP_158658631.1\|1398754_1399870_-\|hypothetical-protein	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	4.59898e-11
NZ_CP019948.1\|WP_085770861.1\|1396347_1398627_+\|asparagine-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|273676	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff. [Amino acid biosynthesis, Aspartate family].	4.36964e-102
NZ_CP019948.1\|WP_158658912.1\|1392400_1392934_-\|methanobactin-biosynthesis-cassette-protein-MbnC	gnl\|CDD\|274952	TIGR04061, hypothetical_protein_MettrDRAFT_3896, AZL_007950 family protein. This set of proteins includes PP_3335 from Pseudomonas putida, a protein of unknown function, and AZL_007950, a member of a putative biosynthetic cluster from Azospirillum sp. B510.	4.98291e-59
NZ_CP019948.1\|WP_102938175.1\|1409918_1410950_+\|di-heme-enzyme	gnl\|CDD\|188554	TIGR04039, MXAN_0977_Heme2, di-heme enzyme, MXAN_0977 family. This model describes a subfamily of di-heme proteins related to the di-heme cytochrome c peroxidase and to MauG (methylamine utilization G), an enzyme that performs a tryptophan tryptophylquinone modification to the methylamine dehydrogenase light chain.	0
NZ_CP019948.1\|WP_085770858.1\|1391099_1392389_-\|hypothetical-protein	gnl\|CDD\|223608	COG0534, NorM, Na+-driven multidrug efflux pump [Defense mechanisms].	2.28955e-06
NZ_CP019948.1\|WP_085770859.1\|1392962_1393793_-\|methanobactin-biosynthesis-cassette-protein-MbnB	gnl\|CDD\|200410	TIGR04159, conserved_hypothetical_protein, methanobactin biosynthesis cassette protein MbnB. The first characterized methanobactin is made from a ribosomal precursor in Methylosinus trichosporium OB3b. Two additional species with homologous precursor peptides (family TIGR04071) are Azospirillum sp. B510 and Gluconacetobacter sp. SXCC-1. This model describes a clique of related sequences, domain or full-length, that occurs always and only next to a methanobactin precursor. The model excludes some close homologs from species where no similar precursor can be found.	2.74083e-38

>NZ_CP019948.1|WP_158658632.1|1400076_1400445_-|hypothetical-protein
MRRNAIAVVLFALALGLKVLLPAATPGHAATVPGQGTVLQYCISAVTYGAGGQQHAPGKGGHVAACPICQLSCEGSFASLERAPLQAPVALHDRVELFGRADGAEPPRPLASAHQPRAPPSC
>NZ_CP019948.1|WP_158658631.1|1398754_1399870_-|hypothetical-protein
MSATLSSSELSGQSDQTDLLIEQIYEATHCPELWPAVLEQIGRIIDAPFGFVIIGDPDAARWANTPAFDEKTARLVRERWLTRGAYPRKLSQICAPRFIADQEVMTLEELRGEPLFSDFCFPSDLGFGATTGLELPTGERVTIGWRRRFGAEPLGLDELKRLDSLRLALIRAVWIGARSRQRGMATVVDTLAAVGMPALILDGDRHVLAANGLLETIKLDVAWSGGGFALRDPAADASLRDALERMKSGDTGAVTTFPVKVKSGRGYVARLLPLRSHDSFAREAAALVLASAGARCAPPEALLRSLFGLTPCEARVARALASGKSVSEIAANESVSPGTVRTHVRGVLEKTGSNRQIDAVALLVGMPLSLG
>NZ_CP019948.1|WP_085770861.1|1396347_1398627_+|asparagine-synthase-(glutamine-hydrolyzing)
MCGIGGIIHLDGAQVSTDVDGKRLRDMARQMSHRGPDDEQIYIHANVGLCFRRLSIVDLQGGQQPLFDEKRSVVTMCNGEIYNHKELRTRLLPNSRFRTHSDCEVIPYLYARMGMDFLSELNGIFAFVLLDKERNKIYLGRDRLGVKPLYYYFDDNLLVFGSEVKTVLAHPTVPKEFDWEAALTLRSRMRYPHREYGLTSFFTGVHHLPAGQFLEIELSTGRRREHVYWDAASACDRRPEADLDRERYVSDYRELLQDSVEMQLMADVECGVFLSGGIDSVAVAHFAAKHKAVHAFSVLSQSTLGNGDAPSAYAAAQSLGIPIHMALFDWRKLDVDPALWRTMLWMVETPIADAEQYYKYLLHAFARARVPGLKVMLLGSGSDEFNGGYTRSFYNAVHDPSWRKFEQILEGYERESLLRRSGAWNKYAILQAGGRPLISRSFLAELAGLTPYETPWAGYTDMHRRVLQMWVLWHEDRTSAANAIEARVPFLDHRLVELTYAVPPQLREELFWDKTILREAMRNELAEQFRHRPKTPFFQGDDLKYTRRLLYNLLCAKNHALIEEAIDAAPGFVEVVDKDALWRFVHDLPNDPEYSNVDLALDLVNMGLLAAMAKAPEEAPDSWSGDLPVSEAIIGDWPTWEQNFGVSLVQRTPSLERSSVLRFADGISVLRKEAGDPKAGRSDAYCILRNDVLEFTLDAKLEPWVRFLRQVDGAKSVEETIRAADVTEAEIWKHLEEAVEYKVLQVSSGGALTSARPSG
>NZ_CP019948.1|WP_085773557.1|1395299_1396151_-|class-I-SAM-dependent-methyltransferase
MRLGRFLDANQQQAEIWNGEGGRAWVEGRALLDRMYQPVLDSILAACPPTVGDRLLDVGCGAGAVTIAYARHLDSGPACVGIDLSSRMIEAARARCEREKANASFIQGDAQVYPFEEASFDLLVSRFGVMFFDDPVRAFANLRSAAKPNAKACFAVWRGPADNAFMREAELAAAPFLPEAPAPNPNAPGRFALSKRERIEAVLSGSGWGRIEILSVDIPCSFPLCDLDYMFTSFGAIGAAFRQLDKDSQAQLIEKVRPVFSKHIVGEEVRFTAGCWIILAHKV
>NZ_CP019948.1|WP_085773556.1|1394114_1395011_-|outer-membrane-beta-barrel-protein
MKGKLLAATVLASALSASAFAADLPSLKAPLVVPPPPLWTGFYVGGNAGGILGGSSGLRSYGVDLFDDAFPAAAGAAGALSAAASGTGAGNRGSFSGGAQVGFNYQFNPRFLVGLEADIQGVAGSSLNTSVTGVARDPLGSPTTMLTAGQVQASLDYVGTMRARAGFLATPTLLLYGTAGLAYANANLSAAYASLDLAGVYGPGYASASYSDTRVGWTAGAGVEWMFLPNWSAKIEYLYYDLGTVSINAIPTGVNSFTGFTGYNYATYTSARFSGNLVRAGVNYHFAWGAPIPVLAKY
>NZ_CP019948.1|WP_085770860.1|1393876_1393966_-|methanobactin
MAIKIAKRIIMSVIGRAGACCGSHCTPVR
>NZ_CP019948.1|WP_085770859.1|1392962_1393793_-|methanobactin-biosynthesis-cassette-protein-MbnB
MRLGFNFTLPETYDMVRRMNAEGHIDYVELLIDNFLCVPPSELAEAFSCPVGFHIMFSRFLEEDRDTLRDFARRLRPYIDALNPIYVSDHCAYFTEHGRRLLFLGEFDYSRDYESAREKAEFWQNELGTKLLVENYPSIMFGGHEAPEFFEKLQQEIGTGVLFDASNAVCAYGNIGLPLERWDRVIASNRHFHVAGYRNSMIQPYVRLDTHAEALAPDTIEFLSSRRELFDKEGATMTYERDNEIHYDDIVADLSRLRAIFPKQQVSARELAIATA
>NZ_CP019948.1|WP_158658912.1|1392400_1392934_-|methanobactin-biosynthesis-cassette-protein-MbnC
MLGALSRPARIFDYPPESRAFVRIDASTRVYWHHLFDICPRLLEMSPPDGAAIFWPFMAWADECGLTLGWTWYLWVYHWLLQSEFKNRLNEEILLEIMGAAAAGWAIYDKGRNCGVVIGCRDTPNLVAGWKVRTVNTGRQVELLEIEDIPAPTELFGCFFAPDFELKTFPGWEGLSR
>NZ_CP019948.1|WP_085770858.1|1391099_1392389_-|hypothetical-protein
MIELSFWRGFPPMLASFCLRAVVVQLDLAMVARLGAGALAGYALISRVAVLDAALTVAVGSMSLIVLSRAQPARAHRKLLQEIWICAALLGLAAASIGALAYPVLIDLLAHKDPAAEFAHSAIFIYLSAAPVRMVESATIFALHSLGRGGLVLGWQICETAVKAALNLHLIASFGFVGCFIASVTVEILSALWAVIVIRRIVVAEGESPPAGFRASFMRDCIIESTRGLAPQLAVFASFALFALSQAAPAGMQRLDAYAAVQGLIVLVLAPLLAATRFFAMRFCGCAPAEVKRLISTLLLGGAPLLFVIAGALALGRDALGAALYGNLGPWWSSFAVALALSLPLRYAGALLRGALLSHGRIGVVATADSAAPWLFALPLIALGLFFDQPAVACLSLLAPEVACVLWLWRRQSLHEEKGASLASGFQLS
>NZ_CP019948.1|WP_085770857.1|1389357_1391046_-|hypothetical-protein
MLSKDSSLSRRSLAQDKRVGRVAQRIHVPVLVIGAGFAGLTSALFLGWLGVPCLLVERRDSLSTHPRAHGLNRRSMELLRSVKGLEAELFAASRSGPNDWTIAVSQTVTGTPISVINTKAMNDASSSLSPARLCSAGQDRVEPVLLRYARAHGADVRFSTSLVGFEQGADCVMAELREEKTGERVDVICDYLLAGDGAGSSVRKELGVEMEGPGVLTHAVSMLFEADLPSVLNGAGAHLYYLRNSEFTGAFVSCDDPRFGQLNVEYDPATKTPRDFGRMHCADLVRKALGTSELEVKVHDVLPWQMSASVAKQFSRGRVFLVGDAAHLTPPVGGLGGQGGIQDAADLAWKLAFVIKGYAGADLLTTYEAERRPVAHLANARGIANYVERMRPDREDIRIRSAEADYLNVVFGYRYRSRAIVPGPDDDGSSSEDPYAPSVSPGFRIPHALMNVQGKQLSLHDLSAGGFVLIAGKNAAHWMKAAARFAVLTGFPLKSYRIDADLQSTEDLHRTLRLDDDAALLIRPDGFVAWRGDGLQGADDRLASALDQICARSDRPEESRRA
>NZ_CP019948.1|WP_085770865.1|1403609_1404179_+|hypothetical-protein
MSSKRTLVAVLLATLWATSSLSPASAETAAKPPAPAPATQAQIDRNGLLILLRNALSALDQANKTGNYTVLRDQAAPGFAAANNPARLGEIFAYLRRDKVDLSGALVMEPQLTVMPEITQNGMLHFAGFFPSASSRLNFEMLFAPVDGQWRLFGLGANLGSAAPAAPVPPPAPAPAPGAKKDEKKPPKP
>NZ_CP019948.1|WP_085773558.1|1404338_1405817_+|efflux-transporter-outer-membrane-subunit
MLALAGCDLEWEKPDLATPLPERFRAAAPTSAPSFHSAHEFAGRFGSAELTRVIDEALAGNNDIAAAVARITEADAQARVSSAPLFPTLSNVNNFERLQIPSTVYGVGVGNSAGLATASSTSSSPFGARRIDFYSLGLNASYTLDIWGVNQDASKAARLLANASRFNRQVVEIATVASTLNAYFAVLNAQDQLRIVNENARIAGKVLTALKARREVGLATVLDVAQQQTVYDTQLAMIPPLQQTLAQQINLLAVLLGRTPESFSIQGTTLKRLHFPKIDPGLPSEVLLRRPDVAEAEARLASQEFSVLQARAAFFPQIQLTGQYGVESIVWRNLATPQAIFWQVLATTTQPLFDGWNLQGQYELQKGKYSELAANYRKQTLTALSDTENALIAIAQTQRHLSLQEDSVASARQALTAAQARLSEGTIDIVTLATNETAYFQGQLVLEQVRLARYQAATTFYQALGGGWSATTREAEIARADAAYETDKGLWP
>NZ_CP019948.1|WP_158658633.1|1406203_1408720_+|TonB-dependent-siderophore-receptor
MPRSTLLRGASICAVALVAVPSLAQQNLPTIEINTPKTRPKAMPQQHARTSGGPRLRAAQAPAEPVAPVPSPPAEAGSPYAALPPSQTAQLTQQSGDRYTGYDAQKAISAKIDAPLMQTPISVKVVTREQMDDQPHFNVNETIATNVSSVALLPSDCSSSQNLIVRGFPTGSNQIAQVYRNGLLDPNEYCPSTANLQAIEVVKGPASVLYGRSEPGGLVDFVTRQPLETPYYSLTEQAGGFGSTRTFVDATGPLTSDKSWLYRVDAEITRDGSFINHVWSQRNFGSGVLTFHPTEQFKANLRAEYQDSSNVDTQPNFPAFGNHPAPIPINTYLEDISFTGANPDQSLKRYVNFDWSYDLNKDWNITQRFAYNNSRNMTTNNYFACLNNPPYPDAAGGPCTFDFTNFNPVPLGTAWNQAMWFPDVVRSITGNLELKGNFTTGMFEHAGLVGIDHLNFNDVDDGFYGFVPTQLNIFAPLYGNGGLLGSAINPFAGYGGSPFGCGYQCSTIALVKKQEWQGFYAQDLISFADDKLHVLLGGRYDIASASTGTAVGSLFPTYNDTLTLANLPGASPFGHYGTTKDKFFSPRVGVVFQPLPWFSVYGSYTESYGLNNGLNAKTFAPLPSQSAIQWEGGVKAEFFDKKLTATAAFFDINKHNMAVADSALLAYYDLLSARSHGAELDITGRIDRNWSVIANYSHVDVRVTKGSPFNFADPFDLINNVPVKGNRFPGVPDNTGNLWVKYDADGAFRGLTGAVGVSRIGTAWGDQANSFIIPAYTLVRLMGGYRFQVGNTWVTTQINVDNLTNTRYFYGWNPAFANRFSLTPGAPRSVLGTLRMEL
>NZ_CP019948.1|WP_085770867.1|1408824_1409781_+|metallo-mystery-pair-system-four-Cys-motif-protein
MRLPLVVALGSALALGASVPSIAAGLASPQPVMISFSLTLDGKPVGCAAPLPKLGASKVDAKLREARFYVYDVKLIDKKGGRAPIALAQNDWQYANLALLDFRDARGGSAPCSPTNPPKNSAITGSTPAGDYVGLEFSVGVPVESQIDGKTVALNHSNVETAPPPLDVQAMSWNWQAGRRFFSVEVDPSNFVALSDGAKARTWMVHLGSSGCKGNPATGEIVSCAQPNRFTVTLDRFDPKTEQVNLDLTTLFKESDVSMDKGGAVGCMSALDDPECPAIFKAIGLNPPGGAGAGLQTKPGVSSIFSARPVVAVSGAKP
>NZ_CP019948.1|WP_102938175.1|1409918_1410950_+|di-heme-enzyme
MSEEKFQLGRRLFYDKRLSGNGTLACSSCHLQERAFTDGRVTSLGSTGEHTPRNAPSIVNSAWHATYTWANPALVTLERQMENPLFGEHPIEMGVNDANKPEIVARFRADADYRNRFKAAFPEKADPISFDTIIKAIAAFERGVVSFGSRYDQYLDGKIKLTEQEQRGHDLYFGEKAECHHCHGTVNLDDQFVHVKTREAETPFHNTGLYDVDGKGAYPFPNRGLLDVTNDADDMGKYRAPSLRNIALTAPYMHDGTVATLEDVIDIYARGGRKIEAGPNAGDGALSPLKSSLIVKIDLTQQEKADLAAFLKTLNDENLLTAERYSNPWATGSGPESEGKGKR
>NZ_CP019948.1|WP_085770870.1|1411460_1412033_+|RNA-polymerase-sigma-factor
MTRSTFKKQRDRASDDPRSCSSGQETAKEPSFDFDAFYRAYAKPARAFARRRARSHDAEDFVQEAFLRAFEDGAIATAASPQTYLHRIVANLIIDEHRKARSRSRYRDDEADQHSVEDPGETEASVQSRLELRQLCGFLSLLPLPCRKAFSLYYIDGLNHCEISMRLGVTVRTVDRYLNKVRAFLIQKIA
>NZ_CP019948.1|WP_085770872.1|1412343_1412742_+|hypothetical-protein
MVGFIGAEPKLPPQSTASCKICTIQLESLCYERAWWFRAFRELLATGIRLFAVVYWIRPRDYLARSPMCYKCLRFRKNALKARSPFFNGLDGYLNPLFNRVRDSLLTTEELERARRLARRAADPSFIDYSQI
>NZ_CP019948.1|WP_102938176.1|1413383_1414880_+|GAF-domain-containing-protein
MNEMSRIANATSDLSETLQILLDVLKSHMNVVRAMISLFEPGSGDIFIHKSFGLTEEEEAKGLYFLGEGVTGRVVETGQPIVAPKISEEPAFLNRTGSRTGELDRKVSFICVPITRGKRVLGTISAERLYDNARLLRLDVEVLSMLATLTAQSAELYLIENVEKVALENENRRLRSALKARFKPSNIIGSSKPMQEVYQLIDRVTRTKTTVLILGESGVGKELVASAIHFNSPLSKGPFVKFNCAALPESVIESELFGHEKGSFTGAVGARKGRFEEANGGTVFLDEVGELSLPVQAKLLRVLQERSFERVGGNMPIRVNLRVLAATNRDLAEMVDKGTFREDLYYRLNVFPITIPPLRDRCNDIVALADHFVARFSDELGMEVKRISTSAINMLLSYHWPGNVRELENVIERAIILSDDGVIHGDNLPPSLQMPVLSEVECKGDLETRLNAVEYEMIIEALKVQKGNMTEAAKMLGLTRRILGLRMGKYKLNHKDFH
>NZ_CP019948.1|WP_085770874.1|1414932_1415313_-|iron-sulfur-cluster-assembly-accessory-protein
MLILTRPAIGAIQSAMLQNDKAGFGVRIAAEGGCSGAKFSMRFEAEPLSEDVVIEIRDVRVFVDEASMDILRGATVDYTPDGDARGFNFTLDPETSLQSSCKSQPSETGTCGSASGRSCSCSASFQ
>NZ_CP019948.1|WP_085770875.1|1415328_1415517_-|4Fe-4S-dicluster-domain-containing-protein
MAYRIIASQCTACGACEFECPNGAIRMKGETYIIDAGKCTECDGDGPRCVEVCPVENTCVRA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019948_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019948_2

1402216-1402319

Orphan

Consensus_repeat	Method
GCGCCGTGGCGATCGGCGGCGGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP019948_2

>merge|NZ_CP019948|2|1402216-1402319|CRISPRCasFinder
GCGCGATCGCGATCGGCGGCTCGGACGGGATTAATTTCGGCGCCGCCGCGGCTAACGCTGGCGACGTGGCGACGGGCACGGGCGCGTCCGCCATCGGCGGCGGG

>NZ_CP019948|2|2|1402216-1402319|CRISPRCasFinder
GCGCGATCGCGATCGGCGGCTCG	GACGGGATTAATTTCGGCG
CCGCCGCGGCTAACGCTGGCGAC	GTGGCGACGGGCACGG
GCGCGTCCGCCATCGGCGGCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019948.1\|WP_085773558.1\|1404338_1405817_+\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP019948.1\|WP_085770874.1\|1414932_1415313_-\|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl\|CDD\|272875
NZ_CP019948.1\|WP_085773557.1\|1395299_1396151_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP019948.1\|WP_158658632.1\|1400076_1400445_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019948.1\|WP_085770875.1\|1415328_1415517_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|237510
NZ_CP019948.1\|WP_085773556.1\|1394114_1395011_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|226163
NZ_CP019948.1\|WP_085770870.1\|1411460_1412033_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP019948.1\|WP_085770860.1\|1393876_1393966_-\|methanobactin	unknown	unknown	unknown
NZ_CP019948.1\|WP_085770865.1\|1403609_1404179_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019948.1\|WP_158658631.1\|1398754_1399870_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197715
NZ_CP019948.1\|WP_085770857.1\|1389357_1391046_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235704
NZ_CP019948.1\|WP_102938176.1\|1413383_1414880_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226132
NZ_CP019948.1\|WP_085770867.1\|1408824_1409781_+\|metallo-mystery-pair-system-four-Cys-motif-protein	unknown	unknown	gnl\|CDD\|188567
NZ_CP019948.1\|WP_085770859.1\|1392962_1393793_-\|methanobactin-biosynthesis-cassette-protein-MbnB	unknown	unknown	gnl\|CDD\|200410
NZ_CP019948.1\|WP_085770861.1\|1396347_1398627_+\|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|273676
NZ_CP019948.1\|WP_085770872.1\|1412343_1412742_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019948.1\|WP_158658912.1\|1392400_1392934_-\|methanobactin-biosynthesis-cassette-protein-MbnC	unknown	unknown	gnl\|CDD\|274952
NZ_CP019948.1\|WP_102938175.1\|1409918_1410950_+\|di-heme-enzyme	unknown	unknown	gnl\|CDD\|188554
NZ_CP019948.1\|WP_085770858.1\|1391099_1392389_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223608
NZ_CP019948.1\|WP_158658633.1\|1406203_1408720_+\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|273805

Protein	Function_ID	Function_description	E-value
NZ_CP019948.1\|WP_085770874.1\|1414932_1415313_-\|iron-sulfur-cluster-assembly-accessory-protein	gnl\|CDD\|272875	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein. Proteins in this subfamily appear to be associated with the process of FeS-cluster assembly. The HesB proteins are associated with the nif gene cluster and the Rhizobium gene IscN has been shown to be required for nitrogen fixation. Nitrogenase includes multiple FeS clusters and many genes for their assembly. The E. coli SufA protein is associated with SufS, a NifS homolog and SufD which are involved in the FeS cluster assembly of the FhnF protein. The Azotobacter protein IscA (homologs of which are also found in E.coli) is associated which IscS, another NifS homolog and IscU, a nifU homolog as well as other factors consistent with a role in FeS cluster chemistry. A homolog from Geobacter contains a selenocysteine in place of an otherwise invariant cysteine, further suggesting a role in redox chemistry. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.24442e-21
NZ_CP019948.1\|WP_158658633.1\|1406203_1408720_+\|TonB-dependent-siderophore-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	1.73084e-73
NZ_CP019948.1\|WP_085770870.1\|1411460_1412033_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	2.47578e-25
NZ_CP019948.1\|WP_085770875.1\|1415328_1415517_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|237510	PRK13795, PRK13795, hypothetical protein; Provisional.	1.94961e-09
NZ_CP019948.1\|WP_085773556.1\|1394114_1395011_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|226163	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane].	4.54416e-10
NZ_CP019948.1\|WP_085773558.1\|1404338_1405817_+\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	8.47967e-62
NZ_CP019948.1\|WP_085773557.1\|1395299_1396151_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.67675e-25
NZ_CP019948.1\|WP_085770857.1\|1389357_1391046_-\|hypothetical-protein	gnl\|CDD\|235704	PRK06126, PRK06126, hypothetical protein; Provisional.	1.42116e-90
NZ_CP019948.1\|WP_102938176.1\|1413383_1414880_+\|GAF-domain-containing-protein	gnl\|CDD\|226132	COG3604, FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms].	1.26699e-161
NZ_CP019948.1\|WP_085770867.1\|1408824_1409781_+\|metallo-mystery-pair-system-four-Cys-motif-protein	gnl\|CDD\|188567	TIGR04052, hypothetical_protein_MettrDRAFT_3899, AZL_007920/MXAN_0976 family protein. Members of this rare protein family regularly occur next to a member of the MXAN_0977 subfamily (TIGR04039) of the di-heme cytochrome c peroxidase/MauG family (pfam03150). MauG itself (TIGR03791) is a protein modification enzyme responsible for the tryptophan tryptophylquinone (TTQ) modification involved in methylamine dehydrogenase activation. All members of this family have a motif of four spaced invariant Cys residues, while additional homologs outside the scope of this family lack the four Cys residues.	1.71198e-88
NZ_CP019948.1\|WP_158658631.1\|1398754_1399870_-\|hypothetical-protein	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	4.59898e-11
NZ_CP019948.1\|WP_085770861.1\|1396347_1398627_+\|asparagine-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|273676	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff. [Amino acid biosynthesis, Aspartate family].	4.36964e-102
NZ_CP019948.1\|WP_158658912.1\|1392400_1392934_-\|methanobactin-biosynthesis-cassette-protein-MbnC	gnl\|CDD\|274952	TIGR04061, hypothetical_protein_MettrDRAFT_3896, AZL_007950 family protein. This set of proteins includes PP_3335 from Pseudomonas putida, a protein of unknown function, and AZL_007950, a member of a putative biosynthetic cluster from Azospirillum sp. B510.	4.98291e-59
NZ_CP019948.1\|WP_102938175.1\|1409918_1410950_+\|di-heme-enzyme	gnl\|CDD\|188554	TIGR04039, MXAN_0977_Heme2, di-heme enzyme, MXAN_0977 family. This model describes a subfamily of di-heme proteins related to the di-heme cytochrome c peroxidase and to MauG (methylamine utilization G), an enzyme that performs a tryptophan tryptophylquinone modification to the methylamine dehydrogenase light chain.	0
NZ_CP019948.1\|WP_085770858.1\|1391099_1392389_-\|hypothetical-protein	gnl\|CDD\|223608	COG0534, NorM, Na+-driven multidrug efflux pump [Defense mechanisms].	2.28955e-06
NZ_CP019948.1\|WP_085770859.1\|1392962_1393793_-\|methanobactin-biosynthesis-cassette-protein-MbnB	gnl\|CDD\|200410	TIGR04159, conserved_hypothetical_protein, methanobactin biosynthesis cassette protein MbnB. The first characterized methanobactin is made from a ribosomal precursor in Methylosinus trichosporium OB3b. Two additional species with homologous precursor peptides (family TIGR04071) are Azospirillum sp. B510 and Gluconacetobacter sp. SXCC-1. This model describes a clique of related sequences, domain or full-length, that occurs always and only next to a methanobactin precursor. The model excludes some close homologs from species where no similar precursor can be found.	2.74083e-38

>NZ_CP019948.1|WP_158658632.1|1400076_1400445_-|hypothetical-protein
MRRNAIAVVLFALALGLKVLLPAATPGHAATVPGQGTVLQYCISAVTYGAGGQQHAPGKGGHVAACPICQLSCEGSFASLERAPLQAPVALHDRVELFGRADGAEPPRPLASAHQPRAPPSC
>NZ_CP019948.1|WP_158658631.1|1398754_1399870_-|hypothetical-protein
MSATLSSSELSGQSDQTDLLIEQIYEATHCPELWPAVLEQIGRIIDAPFGFVIIGDPDAARWANTPAFDEKTARLVRERWLTRGAYPRKLSQICAPRFIADQEVMTLEELRGEPLFSDFCFPSDLGFGATTGLELPTGERVTIGWRRRFGAEPLGLDELKRLDSLRLALIRAVWIGARSRQRGMATVVDTLAAVGMPALILDGDRHVLAANGLLETIKLDVAWSGGGFALRDPAADASLRDALERMKSGDTGAVTTFPVKVKSGRGYVARLLPLRSHDSFAREAAALVLASAGARCAPPEALLRSLFGLTPCEARVARALASGKSVSEIAANESVSPGTVRTHVRGVLEKTGSNRQIDAVALLVGMPLSLG
>NZ_CP019948.1|WP_085770861.1|1396347_1398627_+|asparagine-synthase-(glutamine-hydrolyzing)
MCGIGGIIHLDGAQVSTDVDGKRLRDMARQMSHRGPDDEQIYIHANVGLCFRRLSIVDLQGGQQPLFDEKRSVVTMCNGEIYNHKELRTRLLPNSRFRTHSDCEVIPYLYARMGMDFLSELNGIFAFVLLDKERNKIYLGRDRLGVKPLYYYFDDNLLVFGSEVKTVLAHPTVPKEFDWEAALTLRSRMRYPHREYGLTSFFTGVHHLPAGQFLEIELSTGRRREHVYWDAASACDRRPEADLDRERYVSDYRELLQDSVEMQLMADVECGVFLSGGIDSVAVAHFAAKHKAVHAFSVLSQSTLGNGDAPSAYAAAQSLGIPIHMALFDWRKLDVDPALWRTMLWMVETPIADAEQYYKYLLHAFARARVPGLKVMLLGSGSDEFNGGYTRSFYNAVHDPSWRKFEQILEGYERESLLRRSGAWNKYAILQAGGRPLISRSFLAELAGLTPYETPWAGYTDMHRRVLQMWVLWHEDRTSAANAIEARVPFLDHRLVELTYAVPPQLREELFWDKTILREAMRNELAEQFRHRPKTPFFQGDDLKYTRRLLYNLLCAKNHALIEEAIDAAPGFVEVVDKDALWRFVHDLPNDPEYSNVDLALDLVNMGLLAAMAKAPEEAPDSWSGDLPVSEAIIGDWPTWEQNFGVSLVQRTPSLERSSVLRFADGISVLRKEAGDPKAGRSDAYCILRNDVLEFTLDAKLEPWVRFLRQVDGAKSVEETIRAADVTEAEIWKHLEEAVEYKVLQVSSGGALTSARPSG
>NZ_CP019948.1|WP_085773557.1|1395299_1396151_-|class-I-SAM-dependent-methyltransferase
MRLGRFLDANQQQAEIWNGEGGRAWVEGRALLDRMYQPVLDSILAACPPTVGDRLLDVGCGAGAVTIAYARHLDSGPACVGIDLSSRMIEAARARCEREKANASFIQGDAQVYPFEEASFDLLVSRFGVMFFDDPVRAFANLRSAAKPNAKACFAVWRGPADNAFMREAELAAAPFLPEAPAPNPNAPGRFALSKRERIEAVLSGSGWGRIEILSVDIPCSFPLCDLDYMFTSFGAIGAAFRQLDKDSQAQLIEKVRPVFSKHIVGEEVRFTAGCWIILAHKV
>NZ_CP019948.1|WP_085773556.1|1394114_1395011_-|outer-membrane-beta-barrel-protein
MKGKLLAATVLASALSASAFAADLPSLKAPLVVPPPPLWTGFYVGGNAGGILGGSSGLRSYGVDLFDDAFPAAAGAAGALSAAASGTGAGNRGSFSGGAQVGFNYQFNPRFLVGLEADIQGVAGSSLNTSVTGVARDPLGSPTTMLTAGQVQASLDYVGTMRARAGFLATPTLLLYGTAGLAYANANLSAAYASLDLAGVYGPGYASASYSDTRVGWTAGAGVEWMFLPNWSAKIEYLYYDLGTVSINAIPTGVNSFTGFTGYNYATYTSARFSGNLVRAGVNYHFAWGAPIPVLAKY
>NZ_CP019948.1|WP_085770860.1|1393876_1393966_-|methanobactin
MAIKIAKRIIMSVIGRAGACCGSHCTPVR
>NZ_CP019948.1|WP_085770859.1|1392962_1393793_-|methanobactin-biosynthesis-cassette-protein-MbnB
MRLGFNFTLPETYDMVRRMNAEGHIDYVELLIDNFLCVPPSELAEAFSCPVGFHIMFSRFLEEDRDTLRDFARRLRPYIDALNPIYVSDHCAYFTEHGRRLLFLGEFDYSRDYESAREKAEFWQNELGTKLLVENYPSIMFGGHEAPEFFEKLQQEIGTGVLFDASNAVCAYGNIGLPLERWDRVIASNRHFHVAGYRNSMIQPYVRLDTHAEALAPDTIEFLSSRRELFDKEGATMTYERDNEIHYDDIVADLSRLRAIFPKQQVSARELAIATA
>NZ_CP019948.1|WP_158658912.1|1392400_1392934_-|methanobactin-biosynthesis-cassette-protein-MbnC
MLGALSRPARIFDYPPESRAFVRIDASTRVYWHHLFDICPRLLEMSPPDGAAIFWPFMAWADECGLTLGWTWYLWVYHWLLQSEFKNRLNEEILLEIMGAAAAGWAIYDKGRNCGVVIGCRDTPNLVAGWKVRTVNTGRQVELLEIEDIPAPTELFGCFFAPDFELKTFPGWEGLSR
>NZ_CP019948.1|WP_085770858.1|1391099_1392389_-|hypothetical-protein
MIELSFWRGFPPMLASFCLRAVVVQLDLAMVARLGAGALAGYALISRVAVLDAALTVAVGSMSLIVLSRAQPARAHRKLLQEIWICAALLGLAAASIGALAYPVLIDLLAHKDPAAEFAHSAIFIYLSAAPVRMVESATIFALHSLGRGGLVLGWQICETAVKAALNLHLIASFGFVGCFIASVTVEILSALWAVIVIRRIVVAEGESPPAGFRASFMRDCIIESTRGLAPQLAVFASFALFALSQAAPAGMQRLDAYAAVQGLIVLVLAPLLAATRFFAMRFCGCAPAEVKRLISTLLLGGAPLLFVIAGALALGRDALGAALYGNLGPWWSSFAVALALSLPLRYAGALLRGALLSHGRIGVVATADSAAPWLFALPLIALGLFFDQPAVACLSLLAPEVACVLWLWRRQSLHEEKGASLASGFQLS
>NZ_CP019948.1|WP_085770857.1|1389357_1391046_-|hypothetical-protein
MLSKDSSLSRRSLAQDKRVGRVAQRIHVPVLVIGAGFAGLTSALFLGWLGVPCLLVERRDSLSTHPRAHGLNRRSMELLRSVKGLEAELFAASRSGPNDWTIAVSQTVTGTPISVINTKAMNDASSSLSPARLCSAGQDRVEPVLLRYARAHGADVRFSTSLVGFEQGADCVMAELREEKTGERVDVICDYLLAGDGAGSSVRKELGVEMEGPGVLTHAVSMLFEADLPSVLNGAGAHLYYLRNSEFTGAFVSCDDPRFGQLNVEYDPATKTPRDFGRMHCADLVRKALGTSELEVKVHDVLPWQMSASVAKQFSRGRVFLVGDAAHLTPPVGGLGGQGGIQDAADLAWKLAFVIKGYAGADLLTTYEAERRPVAHLANARGIANYVERMRPDREDIRIRSAEADYLNVVFGYRYRSRAIVPGPDDDGSSSEDPYAPSVSPGFRIPHALMNVQGKQLSLHDLSAGGFVLIAGKNAAHWMKAAARFAVLTGFPLKSYRIDADLQSTEDLHRTLRLDDDAALLIRPDGFVAWRGDGLQGADDRLASALDQICARSDRPEESRRA
>NZ_CP019948.1|WP_085770865.1|1403609_1404179_+|hypothetical-protein
MSSKRTLVAVLLATLWATSSLSPASAETAAKPPAPAPATQAQIDRNGLLILLRNALSALDQANKTGNYTVLRDQAAPGFAAANNPARLGEIFAYLRRDKVDLSGALVMEPQLTVMPEITQNGMLHFAGFFPSASSRLNFEMLFAPVDGQWRLFGLGANLGSAAPAAPVPPPAPAPAPGAKKDEKKPPKP
>NZ_CP019948.1|WP_085773558.1|1404338_1405817_+|efflux-transporter-outer-membrane-subunit
MLALAGCDLEWEKPDLATPLPERFRAAAPTSAPSFHSAHEFAGRFGSAELTRVIDEALAGNNDIAAAVARITEADAQARVSSAPLFPTLSNVNNFERLQIPSTVYGVGVGNSAGLATASSTSSSPFGARRIDFYSLGLNASYTLDIWGVNQDASKAARLLANASRFNRQVVEIATVASTLNAYFAVLNAQDQLRIVNENARIAGKVLTALKARREVGLATVLDVAQQQTVYDTQLAMIPPLQQTLAQQINLLAVLLGRTPESFSIQGTTLKRLHFPKIDPGLPSEVLLRRPDVAEAEARLASQEFSVLQARAAFFPQIQLTGQYGVESIVWRNLATPQAIFWQVLATTTQPLFDGWNLQGQYELQKGKYSELAANYRKQTLTALSDTENALIAIAQTQRHLSLQEDSVASARQALTAAQARLSEGTIDIVTLATNETAYFQGQLVLEQVRLARYQAATTFYQALGGGWSATTREAEIARADAAYETDKGLWP
>NZ_CP019948.1|WP_158658633.1|1406203_1408720_+|TonB-dependent-siderophore-receptor
MPRSTLLRGASICAVALVAVPSLAQQNLPTIEINTPKTRPKAMPQQHARTSGGPRLRAAQAPAEPVAPVPSPPAEAGSPYAALPPSQTAQLTQQSGDRYTGYDAQKAISAKIDAPLMQTPISVKVVTREQMDDQPHFNVNETIATNVSSVALLPSDCSSSQNLIVRGFPTGSNQIAQVYRNGLLDPNEYCPSTANLQAIEVVKGPASVLYGRSEPGGLVDFVTRQPLETPYYSLTEQAGGFGSTRTFVDATGPLTSDKSWLYRVDAEITRDGSFINHVWSQRNFGSGVLTFHPTEQFKANLRAEYQDSSNVDTQPNFPAFGNHPAPIPINTYLEDISFTGANPDQSLKRYVNFDWSYDLNKDWNITQRFAYNNSRNMTTNNYFACLNNPPYPDAAGGPCTFDFTNFNPVPLGTAWNQAMWFPDVVRSITGNLELKGNFTTGMFEHAGLVGIDHLNFNDVDDGFYGFVPTQLNIFAPLYGNGGLLGSAINPFAGYGGSPFGCGYQCSTIALVKKQEWQGFYAQDLISFADDKLHVLLGGRYDIASASTGTAVGSLFPTYNDTLTLANLPGASPFGHYGTTKDKFFSPRVGVVFQPLPWFSVYGSYTESYGLNNGLNAKTFAPLPSQSAIQWEGGVKAEFFDKKLTATAAFFDINKHNMAVADSALLAYYDLLSARSHGAELDITGRIDRNWSVIANYSHVDVRVTKGSPFNFADPFDLINNVPVKGNRFPGVPDNTGNLWVKYDADGAFRGLTGAVGVSRIGTAWGDQANSFIIPAYTLVRLMGGYRFQVGNTWVTTQINVDNLTNTRYFYGWNPAFANRFSLTPGAPRSVLGTLRMEL
>NZ_CP019948.1|WP_085770867.1|1408824_1409781_+|metallo-mystery-pair-system-four-Cys-motif-protein
MRLPLVVALGSALALGASVPSIAAGLASPQPVMISFSLTLDGKPVGCAAPLPKLGASKVDAKLREARFYVYDVKLIDKKGGRAPIALAQNDWQYANLALLDFRDARGGSAPCSPTNPPKNSAITGSTPAGDYVGLEFSVGVPVESQIDGKTVALNHSNVETAPPPLDVQAMSWNWQAGRRFFSVEVDPSNFVALSDGAKARTWMVHLGSSGCKGNPATGEIVSCAQPNRFTVTLDRFDPKTEQVNLDLTTLFKESDVSMDKGGAVGCMSALDDPECPAIFKAIGLNPPGGAGAGLQTKPGVSSIFSARPVVAVSGAKP
>NZ_CP019948.1|WP_102938175.1|1409918_1410950_+|di-heme-enzyme
MSEEKFQLGRRLFYDKRLSGNGTLACSSCHLQERAFTDGRVTSLGSTGEHTPRNAPSIVNSAWHATYTWANPALVTLERQMENPLFGEHPIEMGVNDANKPEIVARFRADADYRNRFKAAFPEKADPISFDTIIKAIAAFERGVVSFGSRYDQYLDGKIKLTEQEQRGHDLYFGEKAECHHCHGTVNLDDQFVHVKTREAETPFHNTGLYDVDGKGAYPFPNRGLLDVTNDADDMGKYRAPSLRNIALTAPYMHDGTVATLEDVIDIYARGGRKIEAGPNAGDGALSPLKSSLIVKIDLTQQEKADLAAFLKTLNDENLLTAERYSNPWATGSGPESEGKGKR
>NZ_CP019948.1|WP_085770870.1|1411460_1412033_+|RNA-polymerase-sigma-factor
MTRSTFKKQRDRASDDPRSCSSGQETAKEPSFDFDAFYRAYAKPARAFARRRARSHDAEDFVQEAFLRAFEDGAIATAASPQTYLHRIVANLIIDEHRKARSRSRYRDDEADQHSVEDPGETEASVQSRLELRQLCGFLSLLPLPCRKAFSLYYIDGLNHCEISMRLGVTVRTVDRYLNKVRAFLIQKIA
>NZ_CP019948.1|WP_085770872.1|1412343_1412742_+|hypothetical-protein
MVGFIGAEPKLPPQSTASCKICTIQLESLCYERAWWFRAFRELLATGIRLFAVVYWIRPRDYLARSPMCYKCLRFRKNALKARSPFFNGLDGYLNPLFNRVRDSLLTTEELERARRLARRAADPSFIDYSQI
>NZ_CP019948.1|WP_102938176.1|1413383_1414880_+|GAF-domain-containing-protein
MNEMSRIANATSDLSETLQILLDVLKSHMNVVRAMISLFEPGSGDIFIHKSFGLTEEEEAKGLYFLGEGVTGRVVETGQPIVAPKISEEPAFLNRTGSRTGELDRKVSFICVPITRGKRVLGTISAERLYDNARLLRLDVEVLSMLATLTAQSAELYLIENVEKVALENENRRLRSALKARFKPSNIIGSSKPMQEVYQLIDRVTRTKTTVLILGESGVGKELVASAIHFNSPLSKGPFVKFNCAALPESVIESELFGHEKGSFTGAVGARKGRFEEANGGTVFLDEVGELSLPVQAKLLRVLQERSFERVGGNMPIRVNLRVLAATNRDLAEMVDKGTFREDLYYRLNVFPITIPPLRDRCNDIVALADHFVARFSDELGMEVKRISTSAINMLLSYHWPGNVRELENVIERAIILSDDGVIHGDNLPPSLQMPVLSEVECKGDLETRLNAVEYEMIIEALKVQKGNMTEAAKMLGLTRRILGLRMGKYKLNHKDFH
>NZ_CP019948.1|WP_085770874.1|1414932_1415313_-|iron-sulfur-cluster-assembly-accessory-protein
MLILTRPAIGAIQSAMLQNDKAGFGVRIAAEGGCSGAKFSMRFEAEPLSEDVVIEIRDVRVFVDEASMDILRGATVDYTPDGDARGFNFTLDPETSLQSSCKSQPSETGTCGSASGRSCSCSASFQ
>NZ_CP019948.1|WP_085770875.1|1415328_1415517_-|4Fe-4S-dicluster-domain-containing-protein
MAYRIIASQCTACGACEFECPNGAIRMKGETYIIDAGKCTECDGDGPRCVEVCPVENTCVRA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019948_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019948_3

3922837-3922936

Orphan

Consensus_repeat	Method
TGAGCGCAGAAAACGTGATCGATTCTAAAAGTTTAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019948_3

>merge|NZ_CP019948|3|3922837-3922936|CRISPRCasFinder
TGAGCGCAGAAAACGTGATCGATTCTAAAAGTTTAGATCACGCTGCGTTCAGGCGGAATCGCTTGAGCGCAGAAAACGTGATCGATTCTAAAAGTTTAGA

>NZ_CP019948|3|3|3922837-3922936|CRISPRCasFinder
TGAGCGCAGAAAACGTGATCGATTCTAAAAGTTTAGA	TCACGCTGCGTTCAGGCGGAATCGCT
TGAGCGCAGAAAACGTGATCGATTCTAAAAGTTTAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019948.1\|WP_158658856.1\|3927634_3928258_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|284676
NZ_CP019948.1\|WP_085772922.1\|3925109_3925490_+\|phosphoribosyl-AMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234598
NZ_CP019948.1\|WP_102938220.1\|3925631_3926627_+\|NTE-family-protein-rssA	unknown	unknown	gnl\|CDD\|182352
NZ_CP019948.1\|WP_085772914.1\|3913604_3914642_+\|cytochrome-c-peroxidase	unknown	unknown	gnl\|CDD\|224771
NZ_CP019948.1\|WP_085772912.1\|3910913_3911993_-\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|277347
NZ_CP019948.1\|WP_085772927.1\|3930442_3932731_+\|PBP1A-family-penicillin-binding-protein	unknown	unknown	gnl\|CDD\|273955
NZ_CP019948.1\|WP_085772926.1\|3929600_3929963_+\|DoxX-family-membrane-protein	unknown	unknown	gnl\|CDD\|379266
NZ_CP019948.1\|WP_085772925.1\|3928976_3929585_+\|FMN-dependent-NADH-azoreductase	unknown	unknown	gnl\|CDD\|234675
NZ_CP019948.1\|WP_085772257.1\|3916489_3917248_+\|methane-monooxygenase/ammonia-monooxygenase-subunit-A	unknown	unknown	gnl\|CDD\|308204
NZ_CP019948.1\|WP_085772917.1\|3919573_3919978_+\|copper-resistance-protein-CopC	unknown	unknown	gnl\|CDD\|377255
NZ_CP019948.1\|WP_085772920.1\|3923210_3923462_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019948.1\|WP_085771887.1\|3915588_3916356_+\|methane-monooxygenase/ammonia-monooxygenase-subunit-C	unknown	unknown	gnl\|CDD\|368178
NZ_CP019948.1\|WP_085772258.1\|3917379_3918639_+\|methane-monooxygenase/ammonia-monooxygenase-subunit-B	unknown	unknown	gnl\|CDD\|368094
NZ_CP019948.1\|WP_085772916.1\|3918926_3919526_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019948.1\|WP_085772924.1\|3928471_3928879_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP019948.1\|WP_158658855.1\|3926668_3927475_-\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|223777
NZ_CP019948.1\|WP_085772921.1\|3923468_3924887_-\|glutamate-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|237213
NZ_CP019948.1\|WP_085772918.1\|3920184_3922131_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|224195
NZ_CP019948.1\|WP_085772913.1\|3912060_3913224_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|188554
NZ_CP019948.1\|WP_085772919.1\|3922188_3922758_+\|copper-chaperone-PCu(A)C	unknown	unknown	gnl\|CDD\|225403

Protein	Function_ID	Function_description	E-value
NZ_CP019948.1\|WP_158658856.1\|3927634_3928258_+\|PAS-domain-containing-protein	gnl\|CDD\|284676	pfam07310, PAS_5, PAS domain. This family contains a number of hypothetical bacterial proteins of unknown function approximately 200 residues long. This region is is distantly similar to other PAS domains.	9.7075e-37
NZ_CP019948.1\|WP_085772922.1\|3925109_3925490_+\|phosphoribosyl-AMP-cyclohydrolase	gnl\|CDD\|234598	PRK00051, hisI, phosphoribosyl-AMP cyclohydrolase; Reviewed.	1.0137e-62
NZ_CP019948.1\|WP_102938220.1\|3925631_3926627_+\|NTE-family-protein-rssA	gnl\|CDD\|182352	PRK10279, PRK10279, patatin-like phospholipase RssA.	2.32166e-79
NZ_CP019948.1\|WP_085772914.1\|3913604_3914642_+\|cytochrome-c-peroxidase	gnl\|CDD\|224771	COG1858, MauG, Cytochrome c peroxidase [Inorganic ion transport and metabolism].	3.14496e-107
NZ_CP019948.1\|WP_085772912.1\|3910913_3911993_-\|serine/threonine-protein-phosphatase	gnl\|CDD\|277347	cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	4.47727e-11
NZ_CP019948.1\|WP_085772927.1\|3930442_3932731_+\|PBP1A-family-penicillin-binding-protein	gnl\|CDD\|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP019948.1\|WP_085772925.1\|3928976_3929585_+\|FMN-dependent-NADH-azoreductase	gnl\|CDD\|234675	PRK00170, PRK00170, azoreductase; Reviewed.	1.13968e-75
NZ_CP019948.1\|WP_085772257.1\|3916489_3917248_+\|methane-monooxygenase/ammonia-monooxygenase-subunit-A	gnl\|CDD\|308204	pfam02461, AMO, Ammonia monooxygenase. Ammonia monooxygenase plays a key role in the nitrogen cycle and degrades a wide range of hydrocarbons and halogenated hydrocarbons.	9.15565e-132
NZ_CP019948.1\|WP_085772917.1\|3919573_3919978_+\|copper-resistance-protein-CopC	gnl\|CDD\|377255	pfam04234, CopC, CopC domain. CopC is a bacterial blue copper protein that binds 1 atom of copper per protein molecule. Along with CopA, CopC mediates copper resistance by sequestration of copper in the periplasm.	1.02919e-20
NZ_CP019948.1\|WP_085771887.1\|3915588_3916356_+\|methane-monooxygenase/ammonia-monooxygenase-subunit-C	gnl\|CDD\|368178	pfam04896, AmoC, Ammonia monooxygenase/methane monooxygenase, subunit C. Ammonia monooxygenase plays a key role in the nitrogen cycle and degrades a wide range of hydrocarbons and halogenated hydrocarbons. This family represents the AmoC subunit. It also includes the particulate methane monooxygenase subunit PmoC from methanotrophic bacteria.	2.70061e-138
NZ_CP019948.1\|WP_085772258.1\|3917379_3918639_+\|methane-monooxygenase/ammonia-monooxygenase-subunit-B	gnl\|CDD\|368094	pfam04744, Monooxygenase_B, Monooxygenase subunit B protein. Family of membrane associated monooxygenases (EC 1.13.12.-) which utilize O(2) to oxidize their substrate. Family members include both ammonia and methane monooxygenases involved in the oxidation of their respective substrates. These enzymes are multi-subunit complexes. This family represents the B subunit of the enzyme; the A subunit is thought to contain the active site..	0
NZ_CP019948.1\|WP_085772926.1\|3929600_3929963_+\|DoxX-family-membrane-protein	gnl\|CDD\|379266	pfam13564, DoxX_2, DoxX-like family. This family of uncharacterized proteins are related to DoxX pfam07681.	3.02332e-05
NZ_CP019948.1\|WP_085772924.1\|3928471_3928879_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	6.24609e-39
NZ_CP019948.1\|WP_158658855.1\|3926668_3927475_-\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|223777	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism].	3.84866e-21
NZ_CP019948.1\|WP_085772921.1\|3923468_3924887_-\|glutamate-synthase-subunit-beta	gnl\|CDD\|237213	PRK12810, gltD, glutamate synthase subunit beta; Reviewed.	0
NZ_CP019948.1\|WP_085772918.1\|3920184_3922131_+\|c-type-cytochrome	gnl\|CDD\|224195	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism].	1.7442e-16
NZ_CP019948.1\|WP_085772913.1\|3912060_3913224_-\|c-type-cytochrome	gnl\|CDD\|188554	TIGR04039, MXAN_0977_Heme2, di-heme enzyme, MXAN_0977 family. This model describes a subfamily of di-heme proteins related to the di-heme cytochrome c peroxidase and to MauG (methylamine utilization G), an enzyme that performs a tryptophan tryptophylquinone modification to the methylamine dehydrogenase light chain.	1.69639e-89
NZ_CP019948.1\|WP_085772919.1\|3922188_3922758_+\|copper-chaperone-PCu(A)C	gnl\|CDD\|225403	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and metabolism].	2.11508e-22

>NZ_CP019948.1|WP_085772919.1|3922188_3922758_+|copper-chaperone-PCu(A)C
MKRRDLLQSTGAILAGLVTGKLFSVGAASAHEYELGKLIVEHPWIRSPKEGETKAYLYAFIHNEGNEPDRLIGAKGEKFGNFEIYPDARSAAKATGIPIPPHATTTLAPGGAYVLLLDIKKHLEVGWGLELTLKFEKAGEVVIDAAIEAPDAAHAHDAEAQARWEKAQASGAAPAAPPAGHDHDHDHHH
>NZ_CP019948.1|WP_085772918.1|3920184_3922131_+|c-type-cytochrome
MSQTFLRFFEALPTALAVGLLLLPLLSEENGARFKPAIALCGVLRAVLGFGLIVLIARAIIPADVPLSFDGLVTFSTSTSVGRAWVATEIVALLFALATLLRLRVDSGVFDKATLGLGGLVLALTSVTGHAIDDSFRWWQQASFLLHTAAGLTWLGGLIGLVWWMFTGRGKSPEVAAKLSERWSNVAKVAIVIVVISGIVMAWENVGSFANLLATPYGRLLTIKLALFCASMLAALALALYLNRRPADKFDFDWYGRVGLAEAVAAAGLVFIAGWIAVITPASHETDLYWPLPFRLSWSATWGYVGAKLPWIDVANWYLAPAWSAVVAVVCAALAAFFWWAPRLRPWRRFSTPGALLLSALFVGSSFATVAYTDTYNDPAVDYTAMSVVRGQKHFNANCVACHGVSGEGNGELASGLKDLKGLPVTPADLTAPHVGNHTIGDIFHWLSYGGTSGVMPGFKETLDPDDRWDVINFLLMMSYSNRARFIGAQPMVQWLIAPDFQLVDPEDKITTFYGLRGTPTLLSFARCNAPEVDEHALEASLAIADETAKAAGANHVTVYQGGCPASLMARAPTNPQAVERAYSIINRYPNEKPSDEIAEAHYLIDRSGYLRARYRHFEDGAGQAAQLSAAIAQLAREPFIIVSLHSH
>NZ_CP019948.1|WP_085772917.1|3919573_3919978_+|copper-resistance-protein-CopC
MSKIKPAQNGKSWRAAAFATIATLLLFSTAPALAHSFLVDANPSSKDHVEAMPKAVKLKFGAGVEPAYSTLSIETSDGKVLAKGAVGKPETPRELTLDAPADLAPGRYVIRYRVLSQDGHIVEGNYEFFLDAKK
>NZ_CP019948.1|WP_085772916.1|3918926_3919526_+|hypothetical-protein
MRRASILSTIFGALFLLFAQGQARAEGGAGPEAMTMGNMCMVMFGYDMIHITSYLPGMSRSEYCEEIPATGKVIMVFDIENPRFRDLPIEIRIIRDPLTPVTSDTKLDPLTEVHFPATRYRTGTFSFEHDYMNNGHYIGMVTLTKESGEQETQIFKFSVGETLWQYVPYLLGAVLIGMLIFFYWRHSHPAARKEPQAAS
>NZ_CP019948.1|WP_085772258.1|3917379_3918639_+|methane-monooxygenase/ammonia-monooxygenase-subunit-B
MKALVKLAALGAAAVVATVGAAAPAFAHGEKSQQAFLRMRTLNWYDVAWSKTSVAVNEEMVLSGKVHVFSAWPQAVANPRVSFLNAGEPGPVLVRTAQFIGEQFAPRSFSMVPGNDYAFSINLRGRRAGRWHVHAQINVEGGGPIIGPGQWIEIKGDMKDFTDPVTLLDGTTIDLEHYGISRVYAWHMPWLIVGAAWILFWFVRKGIIASYLRVAEGRDDEATTDEDRRIGAIVLALTILATIFGYAYTNSQFPRTIPLQAGLQKPLTPITSTGTVGVGKDQVSVDLGGGVYKVPGRELTINVKVKNSTAHPLRLGEYTTAGLRFLNPDVFTTKPEFPDYLLADRGLSTDPTPIAPGETKDIVVKVQDARWDIERLSDLAYDTDSQIGGLLFFFTPDGQRYAAEIGGPVIPKFVAGDMP
>NZ_CP019948.1|WP_085772257.1|3916489_3917248_+|methane-monooxygenase/ammonia-monooxygenase-subunit-A
MSTSKSGGAVGPFHSVAEAAGCVQTTDWMLLTLLFFAVLGGYHVHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFAAASQAFFWVNFRLPFGAVFAVLGLLIGEWINRYVNFWGWTYFPISLVFPSALMVPAIWLDVILLLSGSYVITAVIGALGWGLLFYPNNWPAIGQFHQATEQHGQLMSLADLIGFHFVRTSMPEYIRMVERGTLRTFGKDVVPVAAFFSGFVSMLVYFAWWWLGRFYSTTKVIKEI
>NZ_CP019948.1|WP_085771887.1|3915588_3916356_+|methane-monooxygenase/ammonia-monooxygenase-subunit-C
MSSTTSTAAGAAAGTDTIVDLKGMWIGLAVLNVFYLIVRIYEQIYGWRAGLDSFAPEFQTYWLSILWTEIPLELVSGIGLAGYLWKTRDRNVDAVAPREEMRRLVVLVQWLTVYGIAIYWGASFFTEQDGTWHMTVIRDTDFTPSHIIEFYMSYPIYSVIAVGAFFYAKTRIPYFAHGYSLAFLIVAIGPFMIIPNVGLNEWGHTFWFMEELFVAPLHWGFVFFGWMALGVFGVVLQILGRIHALVGKEGVALLA
>NZ_CP019948.1|WP_085772914.1|3913604_3914642_+|cytochrome-c-peroxidase
MTLRTLIFALALVPLAAHADDLRHDALAASLAPIDAASALKAVKGNDVTPAKIELGQKLFFDPRLSKSQLISCASCHNLSLGGADTGSTSVGHGWQKGPRRAPTVLNAVFNSAQFWDGRAEDLKAQAKGPIQAAVEMSNTPAAVEATLRSMPGYVKDFDAAFPHEAQPVTFDNMAKAIEAFEATLVTPGARFDKFLAGDDAALNDSEKKGLRLFLDKGCASCHSGPNIGGAAYFSFGVAKAPSEELRPIADKGRSAVTKSASDDFVFRAAPLRNVALRAPYFHTGKVWSLDEAVNLMAVHQLGTTLSPEETREIVAFLGSLNGEAPKVAYPTLPPRASETPRPQY
>NZ_CP019948.1|WP_085772913.1|3912060_3913224_-|c-type-cytochrome
MRRNRAKALLLAAAVGIATAPASARAEPLGTRAEPLGLPPVRIPADNPQSDDKVALGQKLFHDKRFSGDGKESCSTCHDDNKAFTDSPLKTSRGISGQFGTRNAPTVINAAYFDSFFWDGRASSLEDQSQFPFLNPVEMGLPSHEPILKIVREDPAYTAAFIKVFGVGGSSISMEHVKKAIAAFERTLVSGDSPFDRWYFGHDNEAISADAKRGFQIFLTQGRCVSCHTIEQDRALFTDNRFHNIGVGINKIQPDVPRLSAEFQKAKAAGASVDNTVLADPKVSDLGRFAVTTHFDEIGAFKTSTLRNISVTGPYMHDGSLKTLRDVVKHYNDGGKSAGDPSINPYLSGGIRPLNLSEQQINDLVAFLETLTSPQYANAKTREGATP
>NZ_CP019948.1|WP_085772912.1|3910913_3911993_-|serine/threonine-protein-phosphatase
MSRLITRRSVMAAGAAGVAGSLTTLPISMVRLAFAGEREDFAFTYISDAHIQQIKGASFVRNWDMGLKRAVAEANLIKPESDFVMFGGDLAQLGKREELDHGAEILSQLKPKLRCVMGEHDYYLDLGEYWSKLYGDHWYSFDHKGVHFVVLNSIIVNDDWTHRRWPTAEQRMLEMADLDNPNGSPFMVGEKQRAWLKEDLSKISHDTPIVVFSHSPLQKIYKGWNFWTDDAEEVQALLQPFRSVNVIYGHVHQIQYNQIGNISFNSVMATAWPWPYPQSYAQAESQLPVLTVPMNRGDPFFERDATGWQLVDLHSGRVTAHYQLWDNEPRTVGFDPAKGAPVDLAYQEPGRRRPPQTHY
>NZ_CP019948.1|WP_085772920.1|3923210_3923462_-|hypothetical-protein
MENWYCDKIVAGPWPFLLLLIPVAGAYFYGRGKRKLAWILIGAWIAIQIPMSFANNFMVNCQGDAPMPGEVAPESEEAPPQGK
>NZ_CP019948.1|WP_085772921.1|3923468_3924887_-|glutamate-synthase-subunit-beta
MGKATGFLEIDRQDRKYKPAADRIRHYDEFVIPLSEEATRAQAARCMNCGIPFCHNGCPVNNQIPDWNDLVYEGDWRKALVNLHSTNNFPEFTGRVCPAPCEAACTLNLSDQPVTIKSIECAIVDRGFAEGWVVPEPPRRKTGKRVAVVGSGPAGLACAQQLARAGHEAHVFESRAKAGGLLRYGIPDFKMEKHLLDRRVAQMEAEGVVFHYNVTVGFDKDVNALLGTYDALALAGGAEAPRDLPTPGRDLAGIHFAMEFLPQQNRRVSGEPTAPGAPILATGKHVVVIGGGDTGSDCIGTSRRQGALSITQLEILPRPPDREDKLRVWPDWPLKLRTSSSHEEGAEREFSIKTSEFLGENGVVKALRCVKVDDKFNEIPDSAFSLRADLVLLAMGFVGPIKGGMLEKLGVALDTRGNVAADTHSYAATREKVFACGDMRRGQSLVVWAIREGRQCAAAIDEFLMGETDLPR
>NZ_CP019948.1|WP_085772922.1|3925109_3925490_+|phosphoribosyl-AMP-cyclohydrolase
MSPTEKRALEEGADFAPRFDAQGLIVCVTTEAITRQVLMVAYMNQLALDKTLETGEAHYWSRSRQSLWRKGESSGQIQRVLSLSVDCDQDALLLEVEPQGDGGACHTGRKSCFYRKLKGGRLVFVE
>NZ_CP019948.1|WP_102938220.1|3925631_3926627_+|NTE-family-protein-rssA
MSDERLSVVPPPASGKAENGPAPRRVKIGLALGAGAARGWAHIGVLRELEERGIFPDVIAGTSIGAVVGGCYAAGKLDQIEAFARSLTKRRVFALMDLSFSGMSLISGERLKTSLEHEVGGLLIEKLPIPFAAVATEVGTGHEIWLQRGALDLAIRASYALPGIFEPVRVGDRYLFDGALVNPVPVTVCRALGAEYVIAINMASDMMYRSKVVADQLAAATAGAPAEGPFGGRGSAALEVGLLPRFFERSAAGSAPNVASAMVDAFNIVQDRILRSRLAGDPPDAIVNARGDEIGMFDFHRAEQAIAMGRDAAKRALPTIFSHIPAAALSS
>NZ_CP019948.1|WP_158658855.1|3926668_3927475_-|rhomboid-family-intramembrane-serine-protease
MRSAGNDAAVAQGGVVKREPIFNIPSVIVAIVAVIVAVQLAAELLPQPFGLWLFGEFAFIPARVSFLLAPAATLRDLADLDADELTGLFDRGPLVTSTMASYAFLHANWTHVGVNAVSLLAFGSPVAKRLGSRRFFLFFIATAVGGALAHLATHPFSLEAVVGASAGISGAIGAIARFAFAPGGALHEDWGRAGAGGDTQPLQGLLDNRRAAIFVATWLLANVLFGTLSTAPGGAGPIAWEAHLGGFLAGLMLYGWFEPRRRPASPSR
>NZ_CP019948.1|WP_158658856.1|3927634_3928258_+|PAS-domain-containing-protein
MRHSISKDLYAYWDRLRGARAAPDRNDIDPAAIRHLLADCFIVEIDQACLLPLRLSGTRLNALWGGEGRGAPFLGMWREADQRELAAAVLTVIDGATPIVGGVKARARAADSEEADPSRRALDLELLLLPLRHFGKTRSRVLGSLSPLGEVDWFGRVPAAKIEIVSLRTMNAREREGFGARPERPPFPPVEIGGRRFIVYEGGKARA
>NZ_CP019948.1|WP_085772924.1|3928471_3928879_-|helix-turn-helix-transcriptional-regulator
MDVTKTREHLKHADCQKIGQVLARVGEKWSVLIIMILADGPRRFSELKRTINGISQRMLTLCLRGLERDGLIKRTVYSVMPPRVEYELTALGRSLTEPVIALGSWAQMHIADIDAAREAFDAQDDRKGVPPPLPK
>NZ_CP019948.1|WP_085772925.1|3928976_3929585_+|FMN-dependent-NADH-azoreductase
MTLLHIDSSILSEQSVSRQLTAAIVQRLTHANPGLAVVHSDLAAEAIDHLSSAEFLAFQGVEPQDDAAKQAVARNAKTLADFLAADVIVVGAPMYNLSLPSQLKAWLDRLAVAGKTFRYTENGVEGLAGGKRVIVASTRGGLYSTGAPAAFLDHQETYLRGFFGFLGITDITFVRAEGLALGPQSRTAAVDAALSDVQKLAA
>NZ_CP019948.1|WP_085772926.1|3929600_3929963_+|DoxX-family-membrane-protein
MNLSFSAAPNKMTLFLSWGLRLVAAAAFLAAGGAKLAGVPMMVESFDHIGIGQWFRLVTGLIEVVGAIGLFFTATAAFSGLLLAVTMFFAALVHLFVIGGSPIPAVVLLAITASIAWLHR
>NZ_CP019948.1|WP_085772927.1|3930442_3932731_+|PBP1A-family-penicillin-binding-protein
MARKDNRREPYFEEARRGELRADPRDRPDAPRSRSRSASPPKEPPCREPPKPPRGRGRGPSRSSSSLLGRLFYWAFVLGIWGAIGLAALVLFYGARLPPIDQLAVPKRPPNVAILSLDGDLIANRGDMGGAAIKISELPPYLPKAFVAIEDRRFYSHWGLDPQGLARALLRDVLHRGGMQGGSTLTQQLAKNLFLTQERTLSRKIQEAILALWLERKYSKDLILELYLNRVYFGGGAYGVEAAAHRYYGHGAREITLPEAAVLAGLMKAPSKLAPDRNPQGAQERAEQVLNAMREEGFITPAQLKGALAKPARAKRDDGAGTINYAADYVMDALADKLGSIDEDLVVTTTIDKRLQRLAEQALTEELDKKGEKFGVTQGAVVALDPTGAVRALVGGRDYGESQFDRAASAKRQPGSAFKPFVYLAGVEHGLTPDTVREDGPLNVKGWQPENYSREYFGPVTLTRALSLSLNTVAVRVGLEVGPKAVVSTAHRLGVASDLQTNASIALGTSEVTPLELVSAYTPFANGGIGVQPHVVAKVLRATDGRVLYQWKNASNGRVIEPRHVAMMNTMMRETLVTGTARKAELPGWPAAGKTGTSQDFRDAWFVGYTSRLVAGVWLGNDDNSPTKHVTGGNLPVEVWSRFMREALRGAPPADLPGGYWNASQGLSAPDLVENVLDFLRGGAPPPNPPPPIRTRALSPAPAENPPSPAPAEDPPPPSPAPNGLTPPADIPSAPPSGVAPRRPPQTRRESGQDFFESLFGR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP019948_3	3.1\|3922874\|26\|NZ_CP019948\|CRISPRCasFinder	3922874-3922899	26	NZ_CP019948.1	2776180-2776205	0	1.0
NZ_CP019948_3	3.1\|3922874\|26\|NZ_CP019948\|CRISPRCasFinder	3922874-3922899	26	NZ_CP019948.1	3569202-3569227	0	1.0
NZ_CP019948_3	3.1\|3922874\|26\|NZ_CP019948\|CRISPRCasFinder	3922874-3922899	26	NZ_CP019948.1	3022043-3022068	1	0.962
NZ_CP019948_3	3.1\|3922874\|26\|NZ_CP019948\|CRISPRCasFinder	3922874-3922899	26	NZ_CP019948.1	1377390-1377415	2	0.923
NZ_CP019948_3	3.1\|3922874\|26\|NZ_CP019948\|CRISPRCasFinder	3922874-3922899	26	NZ_CP019948.1	2251725-2251750	2	0.923
NZ_CP019948_3	3.1\|3922874\|26\|NZ_CP019948\|CRISPRCasFinder	3922874-3922899	26	NZ_CP019948.1	2798167-2798192	2	0.923
NZ_CP019948_3	3.1\|3922874\|26\|NZ_CP019948\|CRISPRCasFinder	3922874-3922899	26	NZ_CP019948.1	3910377-3910402	2	0.923
NZ_CP019948_3	3.1\|3922874\|26\|NZ_CP019948\|CRISPRCasFinder	3922874-3922899	26	NZ_CP019948.1	175640-175665	2	0.923

1. spacer 3.1|3922874|26|NZ_CP019948|CRISPRCasFinder matches to position: 2776180-2776205, mismatch: 0, identity: 1.0

tcacgctgcgttcaggcggaatcgct	CRISPR spacer
tcacgctgcgttcaggcggaatcgct	Protospacer
**************************

2. spacer 3.1|3922874|26|NZ_CP019948|CRISPRCasFinder matches to position: 3569202-3569227, mismatch: 0, identity: 1.0

tcacgctgcgttcaggcggaatcgct	CRISPR spacer
tcacgctgcgttcaggcggaatcgct	Protospacer
**************************

3. spacer 3.1|3922874|26|NZ_CP019948|CRISPRCasFinder matches to position: 3022043-3022068, mismatch: 1, identity: 0.962

tcacgctgcgttcaggcggaatcgct	CRISPR spacer
tcacgctgcgttcaggcggaaccgct	Protospacer
*********************.****

4. spacer 3.1|3922874|26|NZ_CP019948|CRISPRCasFinder matches to position: 1377390-1377415, mismatch: 2, identity: 0.923

tcacgctgcgttcaggcggaatcgct	CRISPR spacer
tcacgccgccttcaggcggaatcgct	Protospacer
******.** ****************

5. spacer 3.1|3922874|26|NZ_CP019948|CRISPRCasFinder matches to position: 2251725-2251750, mismatch: 2, identity: 0.923

tcacgctgcgttcaggcggaatcgct	CRISPR spacer
tcacgctgcgttcaggcgggaccgct	Protospacer
*******************.*.****

6. spacer 3.1|3922874|26|NZ_CP019948|CRISPRCasFinder matches to position: 2798167-2798192, mismatch: 2, identity: 0.923

tcacgctgcgttcaggcggaatcgct	CRISPR spacer
tcacgctgcgttcaggcgggatctct	Protospacer
*******************.*** **

7. spacer 3.1|3922874|26|NZ_CP019948|CRISPRCasFinder matches to position: 3910377-3910402, mismatch: 2, identity: 0.923

tcacgctgcgttcaggcggaatcgct	CRISPR spacer
tcgcgctgcgttcgggcggaatcgct	Protospacer
**.**********.************

8. spacer 3.1|3922874|26|NZ_CP019948|CRISPRCasFinder matches to position: 175640-175665, mismatch: 2, identity: 0.923

tcacgctgcgttcaggcggaatcgct	CRISPR spacer
tcccgctgcgttcaggcggaaccgct	Protospacer
** ******************.****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019948_3	3.1\|3922874\|26\|NZ_CP019948\|CRISPRCasFinder	3922874-3922899	26	NZ_CP044332	Methylocystis parvus strain BRCS2 plasmid unnamed1, complete sequence	101557-101582	2	0.923
NZ_CP019948_3	3.1\|3922874\|26\|NZ_CP019948\|CRISPRCasFinder	3922874-3922899	26	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1475362-1475387	4	0.846
NZ_CP019948_3	3.1\|3922874\|26\|NZ_CP019948\|CRISPRCasFinder	3922874-3922899	26	NC_015178	Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence	263282-263307	5	0.808
NZ_CP019948_3	3.1\|3922874\|26\|NZ_CP019948\|CRISPRCasFinder	3922874-3922899	26	NC_009467	Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence	181288-181313	5	0.808

1. spacer 3.1|3922874|26|NZ_CP019948|CRISPRCasFinder matches to NZ_CP044332 (Methylocystis parvus strain BRCS2 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.923

tcacgctgcgttcaggcggaatcgct	CRISPR spacer
tcgcgctgcgtttaggcggaatcgct	Protospacer
**.*********.*************

2. spacer 3.1|3922874|26|NZ_CP019948|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 4, identity: 0.846

tcacgctgcgttcaggcggaatcgct	CRISPR spacer
caacgctgcgttcaggccgcatcgct	Protospacer
. *************** * ******

3. spacer 3.1|3922874|26|NZ_CP019948|CRISPRCasFinder matches to NC_015178 (Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence) position: , mismatch: 5, identity: 0.808

tcacgctgcgttcaggcggaatcgct	CRISPR spacer
cagcgctgcgttcaggcggcttcgct	Protospacer
. .****************  *****

4. spacer 3.1|3922874|26|NZ_CP019948|CRISPRCasFinder matches to NC_009467 (Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence) position: , mismatch: 5, identity: 0.808

tcacgctgcgttcaggcggaatcgct	CRISPR spacer
cagcgctgcgttcaggcggcttcgct	Protospacer
. .****************  *****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2525116 : 2532488

Enterobacteria_phage(66.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085773680.1\|2525116_2526769_-	energy-dependent translational throttle protein EttA	A0A2K9L0W2	Tupanvirus	5.2e-44	28.4
WP_085771777.1\|2527445_2528495_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.7e-102	53.2
WP_085771778.1\|2528645_2529200_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	5.2e-33	45.6
WP_085771779.1\|2529205_2530087_+	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	3.7e-33	38.5
WP_085771780.1\|2530107_2530980_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.2e-95	57.6
WP_085771781.1\|2531039_2532488_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	M4QSA2	Synechococcus_phage	5.2e-16	37.7

DBSCAN-SWA_2

4497966 : 4507614

Yellowstone_lake_phycodnavirus(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085773895.1\|4497966_4499556_-	Na+/H+ antiporter	A0A2H4J178	uncultured_Caudovirales_phage	2.7e-05	25.6
WP_085773369.1\|4499695_4500394_-	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_085773370.1\|4500406_4501897_-	adenylyltransferase/cytidyltransferase family protein	A0A0F7LBI5	uncultured_marine_virus	4.9e-09	32.6
WP_085773371.1\|4502244_4503183_+	SDR family oxidoreductase	M1NML0	Moumouvirus	3.6e-10	24.9
WP_085773372.1\|4503179_4503770_+	SIS domain-containing protein	NA	NA	NA	NA
WP_085773373.1\|4503775_4504774_+	NAD-dependent epimerase/dehydratase family protein	A0A0N7KVW3	Yellowstone_lake_phycodnavirus	2.9e-34	32.3
WP_085773374.1\|4504805_4505651_+	transketolase	A0A0P0YMZ3	Yellowstone_lake_phycodnavirus	4.1e-13	35.5
WP_085773375.1\|4505647_4506577_+	transketolase	A0A0P0YNE1	Yellowstone_lake_phycodnavirus	3.6e-18	34.8
WP_085773376.1\|4506573_4507614_+	zinc-binding dehydrogenase	A0A0K0KVL7	Prochlorococcus_phage	4.2e-52	36.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP019949

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 35883

Tupanvirus(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158658919.1\|507_9705_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	1.0e-149	27.3
WP_158658920.1\|9683_11744_-	amino acid adenylation domain-containing protein	A0A2K9L3I8	Tupanvirus	1.2e-71	31.7
WP_085773898.1\|11562_12183_-	hypothetical protein	NA	NA	NA	NA
WP_158658921.1\|12163_16366_-	amino acid adenylation domain-containing protein	A0A2K9L3I8	Tupanvirus	5.3e-101	26.5
WP_158658922.1\|16368_22797_-	amino acid adenylation domain-containing protein	A0A2K9L3I8	Tupanvirus	2.0e-123	25.0
WP_085773901.1\|22793_23855_-	taurine catabolism dioxygenase TauD	NA	NA	NA	NA
WP_158658923.1\|23881_33913_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	1.1e-141	25.7
WP_085773903.1\|34181_34406_-	MbtH family NRPS accessory protein	NA	NA	NA	NA
WP_085773904.1\|34449_35883_-	diaminobutyrate--2-oxoglutarate transaminase family protein	A0A1V0SKB7	Klosneuvirus	2.4e-21	23.1

DBSCAN-SWA_2

40938 : 48235

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085773908.1\|40938_42351_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.3e-14	25.2
WP_085773909.1\|42347_43034_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.6e-18	27.3
WP_102938231.1\|43351_48235_+	TonB-dependent siderophore receptor	O11861	Bartonella_henselae_phage	7.9e-08	29.3

DBSCAN-SWA_3

51658 : 52414

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085773913.1\|51658_52414_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-32	36.4

DBSCAN-SWA_4

60726 : 72340

Staphylococcus_phage(25.0%)

integrase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085773921.1\|60726_61431_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.4e-21	31.0
WP_158658927.1\|62141_63233_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_085774006.1\|63297_64527_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.6e-28	32.8
WP_085773923.1\|65561_66095_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_085773924.1\|66389_66752_-	hypothetical protein	NA	NA	NA	NA
WP_085773925.1\|67145_67919_+	band 7 domain-containing protein	A0A2P1EMF1	Moumouvirus	1.3e-26	32.2
WP_085773926.1\|68629_72340_+	response regulator	A0A1V0SGX0	Hokovirus	8.7e-15	24.9

DBSCAN-SWA_5

79134 : 85768

Ochrobactrum_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085773937.1\|79134_80469_-	replication initiation protein RepC	L7TKN6	Rhizobium_phage	2.2e-21	27.2
WP_102938232.1\|80687_81665_-	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	1.7e-47	44.2
WP_085773938.1\|81643_82867_-	plasmid partitioning protein RepA	A0A240F4U1	Ochrobactrum_phage	2.4e-115	53.4
WP_102938237.1\|83056_84007_-	DUF2493 domain-containing protein	NA	NA	NA	NA
WP_085773939.1\|84712_85768_+	Fic family protein	D7RWK9	Brochothrix_phage	1.4e-10	23.7

DBSCAN-SWA_6

89089 : 101685

Erythrobacter_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085773942.1\|89089_89575_+	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	5.2e-21	48.0
WP_085773943.1\|89626_90004_+	DNA-binding protein	NA	NA	NA	NA
WP_085773944.1\|90581_90794_+	cold-shock protein	A0A1X9IGI9	Lactococcus_phage	5.3e-10	47.6
WP_085773945.1\|90882_91902_-	hypothetical protein	A0A0H5AWB1	Pseudomonas_phage	1.5e-09	32.4
WP_085773946.1\|91918_96397_-	DEAD/DEAH box helicase family protein	A0A076FMQ0	Aureococcus_anophage	3.1e-19	21.8
WP_085774009.1\|96991_99070_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	1.6e-26	29.5
WP_085773948.1\|99152_99524_-	hypothetical protein	NA	NA	NA	NA
WP_085773949.1\|99768_101685_-	ATP-dependent helicase	A7KV33	Bacillus_phage	1.3e-51	28.4

DBSCAN-SWA_7

104910 : 105810

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085773952.1\|104910_105810_-	hypothetical protein	A0A0H5AWB1	Pseudomonas_phage	1.0e-14	35.2

DBSCAN-SWA_8

109225 : 109783

Geobacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085774011.1\|109225_109783_+	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	1.8e-12	36.4

DBSCAN-SWA_9

135928 : 137317

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085773982.1\|135928_137317_-	ThiF family adenylyltransferase	A0A1V0SCZ9	Indivirus	1.0e-05	24.7

DBSCAN-SWA_10

140511 : 141183

Stenotrophomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102938238.1\|140511_141183_-	SOS response-associated peptidase	B7SYF4	Stenotrophomonas_phage	1.5e-29	37.9

DBSCAN-SWA_11

146405 : 147586

Leptospira_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102938234.1\|146405_147586_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.7e-37	36.0

DBSCAN-SWA_12

152569 : 154249

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158658941.1\|152569_154249_-	cyclic peptide export ABC transporter	W8CYL7	Bacillus_phage	3.7e-13	23.0

DBSCAN-SWA_13

162170 : 171650

Bodo_saltans_virus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102938125.1\|162170_163113_-\|transposase	IS630 family transposase	A0A2H4UV16	Bodo_saltans_virus	4.3e-11	25.0
WP_158658942.1\|163586_171650_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	1.4e-131	27.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019948

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP019949

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection