CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP021104	Limosilactobacillus fermentum strain FTDC 8312 chromosome, complete genome	2 crisprs	cas14j,cas3,DEDDh,cas9,cas1,cas2,csn2,csa3,WYL,DinG,cas6e,cas5,cas7,cse2gr11,cas8e	0	29	17	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021104_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021104_1

971501-972923

TypeV

Consensus_repeat	Method
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	PILER-CR
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACA	CRISPRCasFinder
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CRT

21 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP021104_1

>merge|NZ_CP021104|1|971501-972923|PILER-CR,CRISPRCasFinder,CRT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAGATAATTATGGGTTATAAAGCAACTCCTCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACATCTTTACGGTTTCAGCATCACCATCTTCTGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAACGGACTGATGCAATGTTAGACGCCCTTTGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAAAATATACTCAATTTGATACCCAGGGTGTGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACTTAATGATGCGCTGAAAGGCATTGCCAGTCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACACAACTATTTCAATCTATCGAAATTATTACGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACGAGTAACAGTGGCTTTACGCGTGAGAGTACGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACACCAGGTTTTGCGTAACTTGATTGACGCCAGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAAGTGGACGGTCAGCTCTACACCATCAGAGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACATCGACAACGTGATTGGGGACCCAATTGTCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACCATTACCTTTACCTTTCTTGTTGTATACCGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACCCGATCGGTAGAAGTCTTTGGGAACTACGCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAGAATACGTCGAGCAACACAAGAAAGACAAGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAACTGGACGAGTGCGGATTTTTTTGTTGCAGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACGGGAACGAAGCGACTTCCGCGCGATCGAAGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAATTGACATCCGGCTTTTTGAGGCCAGACAGTCTTGGATGAGTGTCAGATCAGTAGTTCCGGGTACAGGCAAAGCCGTCAGAGTGACGACAAATCTGTCTTGGATGAGTGTCAGATCAGTAGTTCCGGGTACAGGCAAAGCCGTCAGAGTGACGACAAATCTGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACCTATCAAAGCTGAACAGTTCGATGGTTCTCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACTCGTCAGTGCCACGCATGACCACTTCATAGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACTTGAGCTTAGCAATTGACGCGGTAAGCTGTGTCTTGGATGAGTGTCAGATCAGTAGTTTAGAATTAT

>NZ_CP021104|1|1|971501-972856|PILER-CR
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGATAATTATGGGTTATAAAGCAACTCCTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ATCTTTACGGTTTCAGCATCACCATCTTCT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AACGGACTGATGCAATGTTAGACGCCCTTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AAAATATACTCAATTTGATACCCAGGGTGT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTAATGATGCGCTGAAAGGCATTGCCAGTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ACAACTATTTCAATCTATCGAAATTATTAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GAGTAACAGTGGCTTTACGCGTGAGAGTAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ACCAGGTTTTGCGTAACTTGATTGACGCCA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AAGTGGACGGTCAGCTCTACACCATCAGAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ATCGACAACGTGATTGGGGACCCAATTGTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CATTACCTTTACCTTTCTTGTTGTATACCG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCGATCGGTAGAAGTCTTTGGGAACTACGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGAATACGTCGAGCAACACAAGAAAGACAA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AACTGGACGAGTGCGGATTTTTTTGTTGCA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GGGAACGAAGCGACTTCCGCGCGATCGAAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AATTGACATCCGGCTTTTTGAGGCCAGACA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGGGTAC	AGGCAAAGCCGTCAGAGTGACGACAAATCT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGGGTAC	AGGCAAAGCCGTCAGAGTGACGACAAATCT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CTATCAAAGCTGAACAGTTCGATGGTTCTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TCGTCAGTGCCACGCATGACCACTTCATAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC

>NZ_CP021104|1|1|971501-972923|CRISPRCasFinder
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACA	GATAATTATGGGTTATAAAGCAACTCCTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACA	TCTTTACGGTTTCAGCATCACCATCTTCT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACA	ACGGACTGATGCAATGTTAGACGCCCTTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACA	AAATATACTCAATTTGATACCCAGGGTGT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACT	TAATGATGCGCTGAAAGGCATTGCCAGTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACA	CAACTATTTCAATCTATCGAAATTATTAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACG	AGTAACAGTGGCTTTACGCGTGAGAGTAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACA	CCAGGTTTTGCGTAACTTGATTGACGCCA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACA	AGTGGACGGTCAGCTCTACACCATCAGAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACA	TCGACAACGTGATTGGGGACCCAATTGTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACC	ATTACCTTTACCTTTCTTGTTGTATACCG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACC	CGATCGGTAGAAGTCTTTGGGAACTACGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACA	GAATACGTCGAGCAACACAAGAAAGACAA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACA	ACTGGACGAGTGCGGATTTTTTTGTTGCA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACG	GGAACGAAGCGACTTCCGCGCGATCGAAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACA	ATTGACATCCGGCTTTTTGAGGCCAGACA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGGGTACA	GGCAAAGCCGTCAGAGTGACGACAAATCT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGGGTACA	GGCAAAGCCGTCAGAGTGACGACAAATCT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACC	TATCAAAGCTGAACAGTTCGATGGTTCTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACT	CGTCAGTGCCACGCATGACCACTTCATAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACT	TGAGCTTAGCAATTGACGCGGTAAGCTGT
GTCTTGGATGAGTGTCAGATCAGTAGTTTAGAATTAT

>NZ_CP021104|1|1|971501-972922|CRT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGATAATTATGGGTTATAAAGCAACTCCTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ATCTTTACGGTTTCAGCATCACCATCTTCT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AACGGACTGATGCAATGTTAGACGCCCTTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AAAATATACTCAATTTGATACCCAGGGTGT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTAATGATGCGCTGAAAGGCATTGCCAGTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ACAACTATTTCAATCTATCGAAATTATTAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GAGTAACAGTGGCTTTACGCGTGAGAGTAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ACCAGGTTTTGCGTAACTTGATTGACGCCA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AAGTGGACGGTCAGCTCTACACCATCAGAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ATCGACAACGTGATTGGGGACCCAATTGTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CATTACCTTTACCTTTCTTGTTGTATACCG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCGATCGGTAGAAGTCTTTGGGAACTACGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGAATACGTCGAGCAACACAAGAAAGACAA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AACTGGACGAGTGCGGATTTTTTTGTTGCA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GGGAACGAAGCGACTTCCGCGCGATCGAAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AATTGACATCCGGCTTTTTGAGGCCAGACA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGGGTAC	AGGCAAAGCCGTCAGAGTGACGACAAATCT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGGGTAC	AGGCAAAGCCGTCAGAGTGACGACAAATCT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CTATCAAAGCTGAACAGTTCGATGGTTCTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TCGTCAGTGCCACGCATGACCACTTCATAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTGAGCTTAGCAATTGACGCGGTAAGCTGT
GTCTTGGATGAGTGTCAGATCAGTAGTTTAGAATTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021104.1\|WP_031274857.1\|979530_979824_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021104.1\|WP_021350382.1\|958884_959328_+\|phosphate-starvation-inducible-protein-PsiE	unknown	unknown	gnl\|CDD\|235075
NZ_CP021104.1\|WP_031284392.1\|974713_975295_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021104.1\|WP_003681801.1\|974153_974384_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225215
NZ_CP021104.1\|WP_012391155.1\|980841_981591_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|236959
NZ_CP021104.1\|WP_021350384.1\|960216_960858_-\|thiamine-phosphate-synthase	unknown	unknown	gnl\|CDD\|234590
NZ_CP021104.1\|WP_035437119.1\|969615_970521_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP021104.1\|WP_003681789.1\|981650_981992_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021104.1\|WP_021350385.1\|961842_962607_-\|hydroxyethylthiazole-kinase	unknown	unknown	gnl\|CDD\|236477
NZ_CP021104.1\|WP_003681820.1\|961022_961820_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561
NZ_CP021104.1\|WP_046948259.1\|976087_977011_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP021104.1\|WP_012391154.1\|977984_978938_-\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|178836
NZ_CP021104.1\|WP_003681791.1\|979879_980842_+\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|234786
NZ_CP021104.1\|WP_021349506.1\|970800_971472_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
NZ_CP021104.1\|WP_021349569.1\|973189_973621_+\|alpha/beta-hydrolase-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|369561
NZ_CP021104.1\|WP_035437115.1\|959342_960155_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|238574
NZ_CP021104.1\|WP_021349505.1\|970498_970804_+\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NZ_CP021104.1\|WP_080650625.1\|965275_969421_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
NZ_CP021104.1\|WP_051132375.1\|973636_974029_+\|alpha/beta-hydrolase-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|369561
NZ_CP021104.1\|WP_051132374.1\|963052_965020_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274774

Protein	Function_ID	Function_description	E-value
NZ_CP021104.1\|WP_021350382.1\|958884_959328_+\|phosphate-starvation-inducible-protein-PsiE	gnl\|CDD\|235075	PRK02833, PRK02833, phosphate-starvation-inducible protein PsiE; Provisional.	2.44954e-37
NZ_CP021104.1\|WP_003681801.1\|974153_974384_-\|hypothetical-protein	gnl\|CDD\|225215	COG2336, MazE, Growth regulator [Signal transduction mechanisms].	0.00418451
NZ_CP021104.1\|WP_012391155.1\|980841_981591_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	2.78293e-73
NZ_CP021104.1\|WP_021350384.1\|960216_960858_-\|thiamine-phosphate-synthase	gnl\|CDD\|234590	PRK00043, thiE, thiamine phosphate synthase.	3.83443e-69
NZ_CP021104.1\|WP_035437119.1\|969615_970521_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.36937e-83
NZ_CP021104.1\|WP_021350385.1\|961842_962607_-\|hydroxyethylthiazole-kinase	gnl\|CDD\|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	1.23328e-93
NZ_CP021104.1\|WP_003681820.1\|961022_961820_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	1.11547e-121
NZ_CP021104.1\|WP_046948259.1\|976087_977011_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.45756e-77
NZ_CP021104.1\|WP_012391154.1\|977984_978938_-\|L-lactate-dehydrogenase	gnl\|CDD\|178836	PRK00066, ldh, L-lactate dehydrogenase; Reviewed.	4.87227e-180
NZ_CP021104.1\|WP_003681791.1\|979879_980842_+\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|234786	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase.	1.38905e-101
NZ_CP021104.1\|WP_021349506.1\|970800_971472_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.24983e-87
NZ_CP021104.1\|WP_021349569.1\|973189_973621_+\|alpha/beta-hydrolase-fold-domain-containing-protein	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	4.86973e-29
NZ_CP021104.1\|WP_035437115.1\|959342_960155_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|238574	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.	3.91141e-90
NZ_CP021104.1\|WP_021349505.1\|970498_970804_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.64447e-28
NZ_CP021104.1\|WP_080650625.1\|965275_969421_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	1.91837e-128
NZ_CP021104.1\|WP_051132375.1\|973636_974029_+\|alpha/beta-hydrolase-fold-domain-containing-protein	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	2.5283e-19
NZ_CP021104.1\|WP_051132374.1\|963052_965020_+\|hypothetical-protein	gnl\|CDD\|274774	TIGR03766, hypothetical_protein_lp_2141, conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 (XrtG) is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.	4.76935e-19

>NZ_CP021104.1|WP_021349506.1|970800_971472_+|type-II-A-CRISPR-associated-protein-Csn2
MRLQYHGHQPIELTPGKVVILQIENPSVNTELIQGLQGYNDCLRMIDDEYQELNLSKVMKWEGDLVLNPTKLDSYQTSLDKMIVKNLSIEKRDRMNNLAREVFSEMQDSLFEFDLPLEARYDESLLRLYKYAKIKYLTQVIRQPYGIIETDLKLHLELKDCQVLGYCNVANYLLPEQIQEFATLVEKTELAVLLVEFSEKRETLQQLKQDIYRIDRDFVDWHE
>NZ_CP021104.1|WP_021349505.1|970498_970804_+|CRISPR-associated-endonuclease-Cas2
MRLMVMFDLPTDTSQQRKQYRQFRKKLLNEGFIMIQYSVYVRVCTTRSAAEFLERRLKDYLPDQGVIQSLMLTEKQYSDMHFLLGDEIEEVRNSSKRTIVL
>NZ_CP021104.1|WP_035437119.1|969615_970521_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRSIIIGQHAKITHSTHMMVVQTKDGINEIPMDDIAKVLVETTQAMISSDFMSACLQRNIKVIFVDRKYQPIGETVGYQPVARDYELLERQFLWPLERREQLWTRIAHAKIESQIKVARLNGCPVQELESELEAIEVNDVSNREAVVARKYFPLLFGKDFSRRQENQYNAALDYGYAVLLAETNQSITENGYLVELGIHHQNRANRFNLGSDLMEPFRPVIDYWVTGQKFTEFNRQVRVGLVDALHMVIKYNGTEMLTQNAVRQYVRECLDYLSGERDEIEVKVEFKDEVPNHALNGHV
>NZ_CP021104.1|WP_080650625.1|965275_969421_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MDYVKEYHIGLDIGTSSIGWAVTDSQFKLMRIKGKTAIGVRLFEEGKTAAERRTFRTTRRRLKRRKWRLHYLDKIFAPHLQEVDENFLRRLKQSNIHPEDPAKNQAFIGKLLFPDLLKKNERGYPTLIKMRDELPVEQRAHYPVTNIYKLREAMINEDRQFDLREVYLAVHHIVKYRGHFLNNASVDKFKVGRIDFDKSFNVLNEAYEELQNGEGSFTIEPSKVEKIGQLLLDTKMRKLDRQKAVAKLLEVKVADKEETKRNKQIATAMSKLVLGYKADFATVAMANGNEWKIDLSSETSEDEIEKFREELSDAQNDILTEITSLFSQIMLNEIVPNGMSISESMMDRYWMHERQLAEVKEYLATQPASARKEFDQVYNKYIGQAPKEKGFDLEKGLKKILSKKENWKEIDELLKAGDFLPKQRTSANGVIPHQMHQQELDRIIEKQAKYYPWLATENPATGERDRHQAKYELDQLVSFRIPYYVGPLVTPEVQKATSGAKFAWAKRKEDGEITPWNLWDKIDRAESAEAFIKRMTVKDTYLLNEDVLPANSLLYQKYNVLNELNNVRVNGRRLSVGIKQDIYTELFKKKKTVKAGDVASLVMAKTRGVNKPSVEGLSDPKKFNSNLATYLDLKSIVGDKVDDNRYQMDLENIIEWRSVFEDGEIFADKLTEVEWLTDEQRSALVKKRYKGWGRLSKKLLTGIVDENGQRIIDLMWNTDQNFMQIVNQPVFKEQIDQLNQKAITNDGMTLRERVESVLDDAYTSPQNKKAIWQVVRVVEDIVKAVGNAPKSISIEFARNEGNKGEITRSRRTQLQKLFEDQAHELVKDTSLTEELEKAPDLSDRYYFYFTQGGKDMYTGDPINFDEISTKYDIDHILPQSFVKDDSLDNRVLVSRAENNKKSDRVPAKLYAAKMKPYWNQLLKQGLITQRKFENLTMDVDQNIKYRSLGFVKRQLVETRQVIKLTASILGSMYQEAGTDIIETRAGLTKQLREEFDLPKVREVNDYHHAVDAYLTTFAGQYLNRRYPKLRSFFVYGEYMKFKHGSDLKLRNFNFFHELMEGDKSQGKVVDQQTGELITTRDEVADYFDWVINLKVMLISNETYEETGKYFDASHESSSLYLKNQKKKSKLVVPLKNKLQPEYYGAYTGITQGYMVILKLLDKKGGFGVYRIPRYAADILNKCHDEVAYRNKIAEIISSDPRAPKSFEVVVPRVLKGTFLVDGEEKFILSSYRYKVNATQLILPVSDIKLIQDNFKALKKLNVEMQTKKLIEIYDNILRQVDKYFKLYDINKFRAKLHDGRSKFVELDDFGQDASKEKVIIKILRGLHFGSDLQNLKEIGFGTTPLGQFQVSEAGIRLSNTAFIIFKSPTGLFNRKLYLKNL
>NZ_CP021104.1|WP_051132374.1|963052_965020_+|hypothetical-protein
MGTVTGARRVSRGLAWILVACLVGGLVSNFTFSQNWVTSLILVPLTLLGWWGLPKLAPVIDRLTNRQVTLLVGVGMTVMVLLQMAVLKWLPVTVYHDPLRVLDQATRMAVGHTSWKITYFWRYPQNVPIAYLLSRWLKLTMEMGMGVNRGVHLLSMLMLDGMVLLGIDTAWRVSKKKHLVLGILAFGVLTPFAYTYYLQVFYTDLPVMFVLLYLLRTLVLWRRRNWWQKSLSGALLVLLAMLGQLTKANMIVIIPAMLLTALILWGRHRFKQSQLLVPMLLITLGVALSFPLSSTLDKAAHFTRQTDYEFPLTQWVAMGLNEKSNGVYNTKDAVANVKLKTKAARNAHNLQVIKQRLAKQNVGLIKLWLAKLMVLTNAGNIFHWYNGGMQEAPRSYLKAAPVFTGLVAISYQLATCLLFGFVIKRLLATKMTLALANGQVALLVILTALGYLAFHVLLWEVEERYGEVLVPLSWLLVTLLPAADDQPITPKQVGSVFALGTVAVLVGAMTNLGVNSSGQTVTVAAQRSQLSTQYGAKPVDLAPGKQISQVVKINGAASDVSVQIHAKSHVTVTLVELKTGDEYVFKRHADEYDYQGNVPAGTYQFVIKNQTAVDQDVDIAHVPYYRMAPYPMDDQGTVHWDTSLIYWFRDVRSAN
>NZ_CP021104.1|WP_021350385.1|961842_962607_-|hydroxyethylthiazole-kinase
MQNAIATIKGTNPIVLTVANNVTPADVANGLNALGASPMMSQTPEEADDMVNIAQAAAINLGTLNPHQRGEMEAVMEAAKKYHKPTVLDPVACGATMYRLRVVTELLHQYHFTVIRGNAGEIATLAGVEWQSHGIDAGEGNADLEKVARLAAKKLGSVIVLSGEVDIVTDDTRLARLPYGSPAFKTHVGTGDMLSSLIGAFLATNDDAFDAAVDAVTTFTLCGQAVEDQRPGNWYPGLLNNLDAVTDQQLAAWQ
>NZ_CP021104.1|WP_003681820.1|961022_961820_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MTNEFPQALTIAGSDSGGGAGMQADLKTIQMRHVFATTVVVAVTAQNTLGVQDALALPTEIIDAQFASLADDFKIRAAKTGMLADVPTVQAVVRNLKQYDFGPLTVDPVMIAKGGAKLLADEAITTVKEELLPLATLVTPNLPEAEALTGLKAERPADMVKIGQALQKLGPKNVLVKGGHLGGDQAASDFVLMEDGTSFWMTSPRIDTVQTHGTGDTISACITAELAKGVGLEQAIRTAKGYVEATIRDTIQVGHGHGPLNHWAL
>NZ_CP021104.1|WP_021350384.1|960216_960858_-|thiamine-phosphate-synthase
MLFKNEMLRCYLIGGSQDTHYDPDEFLTKVEAAMQAGITAFQYREKGTSTLSKAETLALGQQVRELATKYGVPLFVDDDLELAAAIKADGIHVGQKDQRIEEVLAAVSDQLMVGYSCNTAAQVAHANQLNVDYIGTGPVFPTISKDDAGSALGVDGLADFVEQSAHPVVAIGGISLDNVGATLPSGCAGLSMISMVLGADDVAGTVKKILELY
>NZ_CP021104.1|WP_035437115.1|959342_960155_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MTQYVQALTIAGHDSDGSAGMPADLHAFFIDGVYGQGLLTAAVSGNSYGITQQQIMPTSFIKEQFKVLADDFAIKAAKTGMLANDDVINAVADSYDEARFGPLVVDPVIITKHGVMLLEQSAYELFRKRIIPLATVITPNFYEAQKLTELELKDDDQVQEAAAKLHALGAKNVVIKGQHIEGQTTPVRDFVSLADGKTFWLEEEYVPTDRVNGTGDTFSAIIAAELAKGHSVEAGVRLAKKVVHEAIANEIEVGHQFGPINHWAGQEAAN
>NZ_CP021104.1|WP_021350382.1|958884_959328_+|phosphate-starvation-inducible-protein-PsiE
MVIEVSSQEWFQKIAHLLELVALVAVGLLGLALIVQLGMELLAVIKLALAPVSNPGFYDFLNEVTSFFIIFEFIVMVIEALRNHGHISITMLMGLGLTALLRHLLAASNSNGIETMVEVGAIVLLTVGLAIYRRFVHDPNESFEKRI
>NZ_CP021104.1|WP_021349569.1|973189_973621_+|alpha/beta-hydrolase-fold-domain-containing-protein
MPIHSRRVIKQYVWIERPDHSKLRLAIFRAKQVATKRPATGILWLHGGGYALETAENALVYAEQLVADGRSVMVAPDYTTSALAPYPAALDDCYLALTWLRDNATRFGVNPNQLVVGGDSTGGGLTAAVCLRARDQGDVKIDW
>NZ_CP021104.1|WP_051132375.1|973636_974029_+|alpha/beta-hydrolase-fold-domain-containing-protein
MLDDRLVLASAKNNNAPVWNSRVNQAAWDLYLGDLLLDKIPIYAAPGRATDLAGLPPAITYVGDLDPFLDETCLYAKRLERAGIPVACKVFDGCYHGFDQVAPHADVTKVAHDFLRTEFFKAQTKYWVEN
>NZ_CP021104.1|WP_003681801.1|974153_974384_-|hypothetical-protein
MKLKVQQVGDSLAFVIPKEFGIPDGQCYTVEQTADGTIIFRPIPPSLFKENGFQGNELRQKDVSLEDGVLDSEWSD
>NZ_CP021104.1|WP_031284392.1|974713_975295_+|hypothetical-protein
MTVYAMNLPGFLAGRSLLTPLTIYAGQTSDYKELALNIANFPKFLQLAFPTAVLDHYELLKRGLMVLTCLILLAGFWYLRRLDLTPQRFLVVATWSFWTCTMFLPSMHDRYSYFVMVMLALVALLDRRMIGVALVSIGISTVLYLRYLLNADAAVDLWPLAIIQIINYCGFTAGTFLHPQPEYLHSFRSITTD
>NZ_CP021104.1|WP_046948259.1|976087_977011_-|IS30-family-transposase
MSTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNSEYQAGLAQTDFERKVSQRGRKSSLTKNLKHLIEEKIQVQKWSPEQVAHVVGIAYKTVYNWIDQGWLDIQLPDLPDHGIRRHRAKEKRGTFNHGRSIEERPHKVETRQEFGHFEADTVLSGKRKGQAVATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQTIERQTGTQVYFAHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDRQLVQINWYLNSRPLKCLNWRTPIEIFLLNLRH
>NZ_CP021104.1|WP_012391154.1|977984_978938_-|L-lactate-dehydrogenase
MSKTHQKVVLIGDGAVGSSYAFAMVQQGLAQEFAIIDLNKKRTEGDALDLEDATPFTAPKLVYGADYDTCKDADLVVITAGAPQKPGETRLDLVDKNLKIIKSVVEPVVKSGFQGIFLVAANPVDILTYAVQKFSGFPRNKVVGSGTSLDSARLRVGLSKLFNVSPVDVNANMMAEHGDTEFAAFSSATIGGLPLYDLAEAKGISKDDLYKLEDDVRNKAYAIINSKGATFYGVATALMRISRAILRDENAVLPVGAPMSGEYGLKDIYIGTPAVINANGIAEVLEVPLDEREAKAMADSAKTLEEIAKNGMAKIQG
>NZ_CP021104.1|WP_031274857.1|979530_979824_+|hypothetical-protein
MREHDLTYKKEYIRPMMSPEHVYVFRFGKHRLNNRVIIRYSHTWTGRVKINEIDVRMHHQHHPRIFKTEDDMLAYLAHHLEKREAKEATRVHTGEEE
>NZ_CP021104.1|WP_003681791.1|979879_980842_+|50S-ribosomal-protein-L11-methyltransferase
MNWTAIVVETSTEAVDAVSYILTDTGATGVKIDDAADYQKLKPGKYGPYGEIVDPSTLPHREEGAAVTGYYPPTTFVPEKIADIRQRVAKLADFGLNPAPARVAAEEIDNQDWATAWQKYYHPVRVTRELTIVPQWEEYTPATADEKLLVLDPGMAFGTGTHPTTQLMLQALTIALRGGESMIDVGTGSGVLSIAAKQLGAGEVWAYDIDDVAVKSAKKNLALNPIAKDVHTGVNSLLDGIHTQVDLVVANILAEIILPLVPQAFENLKPGGKFLTSGIINTKFETVKKAIEAQGFVVDETMRIKDWYGIIAHKPAPEEA
>NZ_CP021104.1|WP_012391155.1|980841_981591_+|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MQRYFVDQALPAHRRLNLPDDVSHHLITVMRAAAGTQVELVLADHHAYLATLLDPATAEVKVEQDLGGDSELPIEVTLACGLPKTKEKPELIVQKATELGAKRIIFFESARSVSHWNDQRQGKKVERLQKIANAAAEQSHRNQIPEVSYVKDLKSLLTVFSFDHRVVAWEESAKQGERAALATVFDQVTPGQSLLAIFGPEGGLTETEVETMTAAGVVACGLGPRILRTETAPLYLMAAVSYHFELAEH
>NZ_CP021104.1|WP_003681789.1|981650_981992_+|hypothetical-protein
MKSLKSLWQRADRRLWVLSILIGFVVTWLVNIVPFINKVERFAVFYLLLYGAFAIWTGFTLQNRRRCWQAFVFPVSFLLAAHLFGPKYSLYFAPAYLAVAYLAWSMVRANRNK

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Crispr_ID: NZ_CP021104_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021104_2

1475985-1477293

TypeI-E

Consensus_repeat	Method
GGATCACCCCCATATACATGGGGAGCAC	CRISPRCasFinder
GGATCACCCCCATATACATGGGGAGCAC	CRT
GGATCACCCCCATATACATGGGGAGCAC	PILER-CR

21 spacers

DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP021104_2

>merge|NZ_CP021104|2|1475985-1477293|CRISPRCasFinder,CRT,PILER-CR
GGATTACCCCCATTTGAATGGGGAAACACGAGGCACACGGAGACAGGGATCCCGGCAAGCAGGCTCATCCTCATATTCATGAGGAGCACCGGGGATGGCGATCAGCCTCTTCCACATGTCGGGATCATCCCCATACACATGGGGAGCACGGAAACCGGCCAACTGGATAAACTGGGTATGTAGGATCACCCCCATATACATGGGGAGCACTTTTCCAAAGCTGGCCAATGTACGCATCCCTAAGGATCACCCCCATATACATGGGGAGCACCCTTGTGGTGCATTCTTACCTTGATTCGTGTAAGGATCACCCCCATATACATGGGGAGCACAAAAGATTGGTAAAACGGCGATTATGGCACTTGGGATCACCCCCATATACATGGGGAGCACATCTGGAAGGCAACTGGATACATGCTCTTACTAGGATCACCCCCATATACATGGGGAGCACAGGGTGACGCTGGCCGGATTGTCTATCTGGCTAGGATCACCCCCATATACATGGGGAGCACTTGACAAGTCGATAATCTGTGTTGACTTCTTCAGGATCACCCCCATATACATGGGGAGCACGATGTTGCGAAAGCTCTTAAAATTACTCGCTCAGGATCACCCCCATATACATGGGGAGCACTTAAAACCGCCTGCTCCATCGACGGTAAAGTCGGGATCACCCCCATATACATGGGGAGCACGTTGTTTTGAAAGCCAAGCTCCGATGATCGGAAGGATCACCCCCATATACATGGGGAGCACAAACTGACTTAACGGATAAAACCGTCTGTCTAAGGATCACCCCCATATACATGGGGAGCACCGTATTTCGGCGGAACGAAGAAGTTTGAGTATAGGATCACCCCCATATACATGGGGAGCACCAATCGTCTGATCTTGTGAGTTGACGAGTGCTGGGATCACCCCCATATACATGGGGAGCACCTCAAGCCAGGTACGACCTTCGGCAATGACGAGGGGATCACCCCCATATACATGGGGAGCACACTCTAACGGTTAATAGTGTCACCGGGCATCTAGGATCACCCCCATATACATGGGGAGCACCAACTTCTGGAGTGGCAATCGATGATAACCAAAGGATCACCCCCATATACATGGGGAGCACAGGGCTTTTTCTTTTGCAAAATCGTAGTTAAAGGGATCACCCCCATATACATGGGGAGCACCAGGTAGGCAACAATTCAACCATTACCTTTGGGGGATCACCCCCATATACATGGGGAGCACTCAGAATTGGTATCGACAGATACGGCCATTTAGGGATCACCCCCATATACATGGGGAGCAC

>NZ_CP021104|2|2|1475985-1477293|CRISPRCasFinder
GGATTACCCCCATTTGAATGGGGAAACA	CGAGGCACACGGAGACAGGGATCCCGGCAAGCA
GGCTCATCCTCATATTCATGAGGAGCAC	CGGGGATGGCGATCAGCCTCTTCCACATGTCG
GGATCATCCCCATACACATGGGGAGCAC	GGAAACCGGCCAACTGGATAAACTGGGTATGTA
GGATCACCCCCATATACATGGGGAGCAC	TTTTCCAAAGCTGGCCAATGTACGCATCCCTAA
GGATCACCCCCATATACATGGGGAGCAC	CCTTGTGGTGCATTCTTACCTTGATTCGTGTAA
GGATCACCCCCATATACATGGGGAGCAC	AAAAGATTGGTAAAACGGCGATTATGGCACTTG
GGATCACCCCCATATACATGGGGAGCAC	ATCTGGAAGGCAACTGGATACATGCTCTTACTA
GGATCACCCCCATATACATGGGGAGCAC	AGGGTGACGCTGGCCGGATTGTCTATCTGGCTA
GGATCACCCCCATATACATGGGGAGCAC	TTGACAAGTCGATAATCTGTGTTGACTTCTTCA
GGATCACCCCCATATACATGGGGAGCAC	GATGTTGCGAAAGCTCTTAAAATTACTCGCTCA
GGATCACCCCCATATACATGGGGAGCAC	TTAAAACCGCCTGCTCCATCGACGGTAAAGTCG
GGATCACCCCCATATACATGGGGAGCAC	GTTGTTTTGAAAGCCAAGCTCCGATGATCGGAA
GGATCACCCCCATATACATGGGGAGCAC	AAACTGACTTAACGGATAAAACCGTCTGTCTAA
GGATCACCCCCATATACATGGGGAGCAC	CGTATTTCGGCGGAACGAAGAAGTTTGAGTATA
GGATCACCCCCATATACATGGGGAGCAC	CAATCGTCTGATCTTGTGAGTTGACGAGTGCTG
GGATCACCCCCATATACATGGGGAGCAC	CTCAAGCCAGGTACGACCTTCGGCAATGACGAGG
GGATCACCCCCATATACATGGGGAGCAC	ACTCTAACGGTTAATAGTGTCACCGGGCATCTA
GGATCACCCCCATATACATGGGGAGCAC	CAACTTCTGGAGTGGCAATCGATGATAACCAAA
GGATCACCCCCATATACATGGGGAGCAC	AGGGCTTTTTCTTTTGCAAAATCGTAGTTAAAG
GGATCACCCCCATATACATGGGGAGCAC	CAGGTAGGCAACAATTCAACCATTACCTTTGGG
GGATCACCCCCATATACATGGGGAGCAC	TCAGAATTGGTATCGACAGATACGGCCATTTAG
GGATCACCCCCATATACATGGGGAGCAC

>NZ_CP021104|2|2|1476046-1477293|CRT
GGCTCATCCTCATATTCATGAGGAGCAC	CGGGGATGGCGATCAGCCTCTTCCACATGTCG
GGATCATCCCCATACACATGGGGAGCAC	GGAAACCGGCCAACTGGATAAACTGGGTATGTA
GGATCACCCCCATATACATGGGGAGCAC	TTTTCCAAAGCTGGCCAATGTACGCATCCCTAA
GGATCACCCCCATATACATGGGGAGCAC	CCTTGTGGTGCATTCTTACCTTGATTCGTGTAA
GGATCACCCCCATATACATGGGGAGCAC	AAAAGATTGGTAAAACGGCGATTATGGCACTTG
GGATCACCCCCATATACATGGGGAGCAC	ATCTGGAAGGCAACTGGATACATGCTCTTACTA
GGATCACCCCCATATACATGGGGAGCAC	AGGGTGACGCTGGCCGGATTGTCTATCTGGCTA
GGATCACCCCCATATACATGGGGAGCAC	TTGACAAGTCGATAATCTGTGTTGACTTCTTCA
GGATCACCCCCATATACATGGGGAGCAC	GATGTTGCGAAAGCTCTTAAAATTACTCGCTCA
GGATCACCCCCATATACATGGGGAGCAC	TTAAAACCGCCTGCTCCATCGACGGTAAAGTCG
GGATCACCCCCATATACATGGGGAGCAC	GTTGTTTTGAAAGCCAAGCTCCGATGATCGGAA
GGATCACCCCCATATACATGGGGAGCAC	AAACTGACTTAACGGATAAAACCGTCTGTCTAA
GGATCACCCCCATATACATGGGGAGCAC	CGTATTTCGGCGGAACGAAGAAGTTTGAGTATA
GGATCACCCCCATATACATGGGGAGCAC	CAATCGTCTGATCTTGTGAGTTGACGAGTGCTG
GGATCACCCCCATATACATGGGGAGCAC	CTCAAGCCAGGTACGACCTTCGGCAATGACGAGG
GGATCACCCCCATATACATGGGGAGCAC	ACTCTAACGGTTAATAGTGTCACCGGGCATCTA
GGATCACCCCCATATACATGGGGAGCAC	CAACTTCTGGAGTGGCAATCGATGATAACCAAA
GGATCACCCCCATATACATGGGGAGCAC	AGGGCTTTTTCTTTTGCAAAATCGTAGTTAAAG
GGATCACCCCCATATACATGGGGAGCAC	CAGGTAGGCAACAATTCAACCATTACCTTTGGG
GGATCACCCCCATATACATGGGGAGCAC	TCAGAATTGGTATCGACAGATACGGCCATTTAG
GGATCACCCCCATATACATGGGGAGCAC

>NZ_CP021104|2|2|1476167-1477293|PILER-CR
GGATCACCCCCATATACATGGGGAGCAC	TTTTCCAAAGCTGGCCAATGTACGCATCCCTAA
GGATCACCCCCATATACATGGGGAGCAC	CCTTGTGGTGCATTCTTACCTTGATTCGTGTAA
GGATCACCCCCATATACATGGGGAGCAC	AAAAGATTGGTAAAACGGCGATTATGGCACTTG
GGATCACCCCCATATACATGGGGAGCAC	ATCTGGAAGGCAACTGGATACATGCTCTTACTA
GGATCACCCCCATATACATGGGGAGCAC	AGGGTGACGCTGGCCGGATTGTCTATCTGGCTA
GGATCACCCCCATATACATGGGGAGCAC	TTGACAAGTCGATAATCTGTGTTGACTTCTTCA
GGATCACCCCCATATACATGGGGAGCAC	GATGTTGCGAAAGCTCTTAAAATTACTCGCTCA
GGATCACCCCCATATACATGGGGAGCAC	TTAAAACCGCCTGCTCCATCGACGGTAAAGTCG
GGATCACCCCCATATACATGGGGAGCAC	GTTGTTTTGAAAGCCAAGCTCCGATGATCGGAA
GGATCACCCCCATATACATGGGGAGCAC	AAACTGACTTAACGGATAAAACCGTCTGTCTAA
GGATCACCCCCATATACATGGGGAGCAC	CGTATTTCGGCGGAACGAAGAAGTTTGAGTATA
GGATCACCCCCATATACATGGGGAGCAC	CAATCGTCTGATCTTGTGAGTTGACGAGTGCTG
GGATCACCCCCATATACATGGGGAGCAC	CTCAAGCCAGGTACGACCTTCGGCAATGACGAGG
GGATCACCCCCATATACATGGGGAGCAC	ACTCTAACGGTTAATAGTGTCACCGGGCATCTA
GGATCACCCCCATATACATGGGGAGCAC	CAACTTCTGGAGTGGCAATCGATGATAACCAAA
GGATCACCCCCATATACATGGGGAGCAC	AGGGCTTTTTCTTTTGCAAAATCGTAGTTAAAG
GGATCACCCCCATATACATGGGGAGCAC	CAGGTAGGCAACAATTCAACCATTACCTTTGGG
GGATCACCCCCATATACATGGGGAGCAC	TCAGAATTGGTATCGACAGATACGGCCATTTAG
GGATCACCCCCATATACATGGGGAGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021104.1\|WP_015639204.1\|1479139_1479796_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NZ_CP021104.1\|WP_035436266.1\|1475251_1475731_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021104.1\|WP_035436260.1\|1480496_1481597_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP021104.1\|WP_035436249.1\|1483845_1486587_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP021104.1\|WP_086031796.1\|1468902_1469016_+\|putative-metal-homeostasis-protein	unknown	unknown	unknown
NZ_CP021104.1\|WP_003683897.1\|1486817_1487177_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP021104.1\|WP_035436271.1\|1473430_1474327_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP021104.1\|WP_035436299.1\|1479808_1480516_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP021104.1\|WP_154244375.1\|1474810_1474978_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021104.1\|WP_015639203.1\|1478204_1479143_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP021104.1\|WP_024501037.1\|1487297_1488725_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP021104.1\|WP_035436269.1\|1474371_1474791_-\|amino-acid-decarboxylase	unknown	unknown	unknown
NZ_CP021104.1\|WP_035436252.1\|1482206_1483865_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_CP021104.1\|WP_035436257.1\|1481605_1482190_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_CP021104.1\|WP_154244373.1\|1469164_1469323_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021104.1\|WP_035436277.1\|1471341_1471893_+\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|223241
NZ_CP021104.1\|WP_035436274.1\|1471904_1473305_+\|SLC13-family-permease	unknown	unknown	gnl\|CDD\|223547
NZ_CP021104.1\|WP_035436263.1\|1477322_1478201_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
NZ_CP021104.1\|WP_154244374.1\|1469370_1469535_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021104.1\|WP_035436280.1\|1468597_1468915_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP021104.1\|WP_015639204.1\|1479139_1479796_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	3.9471e-78
NZ_CP021104.1\|WP_035436274.1\|1471904_1473305_+\|SLC13-family-permease	gnl\|CDD\|223547	COG0471, CitT, Di- and tricarboxylate transporters [Inorganic ion transport and metabolism].	2.32141e-20
NZ_CP021104.1\|WP_035436260.1\|1480496_1481597_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.66335e-142
NZ_CP021104.1\|WP_003683897.1\|1486817_1487177_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	9.14881e-68
NZ_CP021104.1\|WP_035436252.1\|1482206_1483865_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	6.73876e-76
NZ_CP021104.1\|WP_035436249.1\|1483845_1486587_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.38144e-85
NZ_CP021104.1\|WP_015639203.1\|1478204_1479143_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.33084e-132
NZ_CP021104.1\|WP_035436257.1\|1481605_1482190_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	9.30459e-24
NZ_CP021104.1\|WP_035436271.1\|1473430_1474327_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	8.33056e-38
NZ_CP021104.1\|WP_024501037.1\|1487297_1488725_-\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.63263e-77
NZ_CP021104.1\|WP_035436277.1\|1471341_1471893_+\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|223241	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism].	1.74071e-92
NZ_CP021104.1\|WP_035436299.1\|1479808_1480516_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.37927e-52
NZ_CP021104.1\|WP_035436263.1\|1477322_1478201_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	6.85359e-40

>NZ_CP021104.1|WP_035436266.1|1475251_1475731_-|hypothetical-protein
MRKKVQQIGNQQRHRFRAKFCRLGYKVSYGHFKPTLLLTEVELIDDMEKPQVVTSHLWFNYTTGFQRLGQLQPGDVILFNARVHQYRKGYFTAKQEVDYNLSHPSKVGLASGQKRPLVPEDNVALIGMIMMQNEDYYLANDRPYEPFYVSRYQDWLQKG
>NZ_CP021104.1|WP_154244375.1|1474810_1474978_-|hypothetical-protein
MKEKLLREFRLTGTLELRAKNKPKVTSELNIQFGYALPILLVFGLGIWWFVKSHG
>NZ_CP021104.1|WP_035436269.1|1474371_1474791_-|amino-acid-decarboxylase
MQSVQEFTVTKEHYTMQAALFVIAKDVLAVITGGDHPHIGDVTAVAKGEEPQTVRYPSHDGRFHKDDFLSERLVKKVAPLVPGSLTVLAGVHVDHITKTQLIQAGPMVDELAQQVAAWLLAHPIQFSDAQYYGDDEQPS
>NZ_CP021104.1|WP_035436271.1|1473430_1474327_+|LysR-family-transcriptional-regulator
MNINDFQGFIYIYQLRSITKAATQMHLSKPEMSKRLRSLEAELNLQLVDRTNRRALKITPAGRTFYHHALSMMEQYQAMMRDLATIRHPLTNQIKIGTIPVVGQYKITAGITRFNQQHPQLQATLLENEGDVIIEQLHQGEIDAAILRDTQSAQFDEATYYRKTLVTDQLMVIVPKNSPLANRRALAIPDLKHVQIASLPVGSGVYETIAQLFAHHNLTPHIFFQSTHIETLISLLGYDNTVTLLFKKSITPFLNDQVVMIPVQPSFNSCLQFVFKNNTGSYQLHHLLSSVQDYLAKV
>NZ_CP021104.1|WP_035436274.1|1471904_1473305_+|SLC13-family-permease
MSTEFAKKELLNKRVLGFFGGIIVFLLIYLAPISGLGYTGKMDLALSLMTVVWWATQVAQPAYVGGFFLMMLIITKTATPAQVFSKPWTGSTMWLVMGAYLIAGAVNESGVGQRIAYAFIIRFVRSWNGLIVGIFILTFILALLIPHPWPRAFMILAVVLAVGRAADMDKDDLGKLGLAIFAASCPLSGVFLTGDTSLNPLAVADSGISVSFVRYFEVMSVPMIVAALITMFLIMFLFKPNKPIKIDVAQLKVEQQKLGQMSGKEKRTIFWIVVAIILWLTSSITGIDVGWLTLTVAVLMSMPVIGGILTPASWSGVQINVLVFLTSAMAIGNVGSVTGMNKWLATTVIPGNLPHNIYLLSLEITLFAMIIHMFMGSVIAVMGITIPAFVTATAHMGISPLAISLLVFSITNLHYILPFHNLAVLVGMDGGGYTAKQVSKLGIALTPFIFLIAIVLMFWFHICGLA
>NZ_CP021104.1|WP_035436277.1|1471341_1471893_+|UbiX-family-flavin-prenyltransferase
MKRIVIGVSGASGTIYAVDLLKKLHQVPDVETHLIMSAWAKKNLELETDLSLADLTALADVVHNNHDLGATVASGSFLTSGMVIVPASMKTISGIANAYDDSLITRAADVTIKEKRRLIIVPRETPLSEIHLENLLKLARVGAQIIPPIPAFYNHPQTIQDLVDHQSMKIMDSFGIEHHFGHR
>NZ_CP021104.1|WP_154244374.1|1469370_1469535_-|hypothetical-protein
MKKRKKYSLKEHYNRLMEKLFLEGEEEPDYLVENFFSMPVLFFGLRIFCLFFYP
>NZ_CP021104.1|WP_154244373.1|1469164_1469323_-|hypothetical-protein
MKDHLLKWCAGSLQIDFRQEEGRKLTLGFKIELGCIFAVVFGGLVYWWVKVH
>NZ_CP021104.1|WP_086031796.1|1468902_1469016_+|putative-metal-homeostasis-protein
MEKLDYSSALRRLKSPNIKTRKRALKTIKQLKAQKNK
>NZ_CP021104.1|WP_035436280.1|1468597_1468915_+|hypothetical-protein
MSASYTDQEVIALIGRVLNHYHLSGEHFLFNRTATGLEVLTTPNDESWLLVSLLGWLQADFDLTFLDGAGHPVDFCDHRALMFTIRSVDEDAINSLLPKDDQWKN
>NZ_CP021104.1|WP_035436263.1|1477322_1478201_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MIVIALSKVPASLRGDLTKWCQEIQTGIYVGRFSARIRDLLWERIQKNIGNGEATIVYTTNNELGYAFRSTREDREVVNYDGIPLLMHLEKPPSDIKHGFSDAAKFHHAKQARKGKETGMTRTVVALDIETTGLNSATDEIISIGAVKSTKGRGLERFYRIVRTSKQIPPKIVKLTGLNQRKVNQEGISLEAALTDFKDFIGHAIVVGYNVAFDWEFIERGYDKIGQDRLGNRIIDLLKVVRQKEVFLDNFRFETVLKYYQIENQDQHNSLADAEASIKLMTKLIEKWFLKI
>NZ_CP021104.1|WP_015639203.1|1478204_1479143_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MKSGMGAEKPKLTELSRTSDRISFLYLEHAKINRQDSAIKVMDARGIVFVPVALISVLLLGPGVDVTHRAMELMGDSGLAVVWVGEYGVRQYAHGRALNHSSKLLEKQAKLVSNVRSRVAVARKMYQMRFPNEDVTKLTMQQLRGKEGSRVRKVYRKLSNETGVAWNGREYNVDNFDEGTPINKALTAANQTLYGLSYSVVAALGASPGLGFIHTGHDLAFIYDFADIYKANYSIPISFEMTAKYGDEDIATRTRQAMRDTFRDGKLLKQMVHDLKFLFEVEDDQDPEFMSLWDDKEGMQKFGVQYHEISEE
>NZ_CP021104.1|WP_015639204.1|1479139_1479796_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRVEVDTKNRQKISDLTHLGAYHSWVEDSFPQEVVKGERKRHLWRLDQVQGKEYLLVLSDDQPNMNRLEKYGVPGSAQSKTYDQFLSQIQTGRVMRFRLTANPVHRVTEPGEKAGKVYPHITIAQQEKWLIDRAEKNGFTLLTTADGYQFDVVGRDRPQLLHKGQRRVKLNRVSYEGLLKVSDADLFKKLLVNGIGKEKAYGMGLMTVIPVHEKA
>NZ_CP021104.1|WP_035436299.1|1479808_1480516_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKTLTVNLTGPLQSYGNEATFERRTTYHYPSKSAVIGMIAAGLGYRRDDQRIESLNKLGIAVRIDQRGKIMTDFHTVRPQNAKNSKLTYRDYLQDAVFVVAIGSGDDNLIGQIKYALRHPKFQLFLGRRANVPAGVLWIEEFDTDPMTVLKELPWQASDWFKKRMKKELYSAEVVADWGLEKGADRNLIQVKDQVGSFNVQHRYHKYRPAIRTFVTLKNNMYQENSGEHDVWSSI
>NZ_CP021104.1|WP_035436260.1|1480496_1481597_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MMKNLYLDINVLQTVPSSNINRDDTGTPKTAIYGGVTRSRVSSQSWKRVMRQAFMTDSEGAEWLNSHRTKHAAKLLAGRIKKLSDGLSDEEALEKALEAFNTTKVKPKKDKKTGEYLTGALLQLSNGQLDKLAHYVLSHDELDTKEIKETLMEKSSLDLALFGRMVADNPELNVDAASQVAHAISTHAIVPEYDFYTAIDDDKEDSQAGSAMMGTLAYNSSTLYRYANVNINELMHNLGSTELTIEGVKLFVKEFMLTMPTGKENTFANKTLPQYVMITLREDTPVNLVSAFEEPVKSNHGYVEESIERLEKEYSDTLKLVEQPIYTGVLTTKQSNLNQVANTEELLDQVAKFVSEKVVDDENVNG
>NZ_CP021104.1|WP_035436257.1|1481605_1482190_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSHISKTVAKIIHQLYNDGDLDKGTLAKLRTANSLLSRDATAIWPLLFENIEDKQDLSQTGEPSFAETAIFAALRAYAIYQQGTEESVFKHSDNWRENHSLFQAFGRLRSDPDFTDSLDKRVSNVLTSLNFQSAENSITQLVRILKSKGQGGQIDFAQLGEDLYRFQFSSESARQVTLKWGQDYYWNNLKDNQE
>NZ_CP021104.1|WP_035436252.1|1482206_1483865_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MKNRHFNLITEPWIKVLDENYQELTVSMEEVLKNARHYRQLAGEMRSQDLVILRLLLAVLLSVYQRVNADGEPYEGLTMDDRWQVTVDPDLDFEDLIEEMQETWQTLYEGGEFSQAVFDYLKAYEDRFDFFGEHAFYQVGREFYDAHVPAKKWIKTGNGKVAVKEINRRVSESNNSAAIFSPRSNGFKNRLSLDEFVRWVITYQNYTGVSGKTSVNGMNDVSKGWLYSISPVYVKGANLFETLMLNLTLFQDDQEKYRYPKPVWEWNLEIYIDHRVEGLVPDNLPELYTVLSRITYIEWNGDYPTTIQGKLSRFDEVNAFIEPMITWRLDKKGYKPRTKQLSDLRIAMWRNFGDYVGTNDGETRVPGIVWWLNYLTDKGFLTQETNINLSSAGMIVGDNKKSQMPAAEFFDDFTIRADVLFDPDPLAARRWPRRIEEVIELTKRVGETLYYFAKEVAELRDSNGSGSFANRISAEFYDQLNEPFLGWLASLRNDQDRDEKILEWKKALHSLVMQTARKLVQESSPTEMRGKDSTNIFTLYNATQLKIRKQLS
>NZ_CP021104.1|WP_035436249.1|1483845_1486587_-|CRISPR-associated-helicase/endonuclease-Cas3
MKELSKQVKALWGKKSNVDGQELWQPLVVHLLDTKNVINWLYSHWLTDGQRKVIQGNLSEEAGQQLAEFLGAVHDLGKATPVFQIKKSYNGDQDLDDQLMEQLIQVGFDHLGDLILASPRESPHALAGEALLEQFGIDQTVGAIIGGHHGKPQSNVPRTEINDHTKNYWQVDNLVKAREGNWLKVQRELFSFCLQECGYQSVADVPTNLTQPQAVLLEGLLIMADWLASTEYLGDDRSKPLFPLIPLHNSMEDLDLGARFQRAILTWRVEDQWFPEQITDIDEQFQKRWGFKPHPVQCQMDQVIQDTTDPGIIIIELEPGAGKTEIALEAVEQLAYTNGEQGLFFGLPTQATSNAMFDRVNDWLAKVAKDDDAQLGIKLMHSKAEFNPTYADLKIPRAHNVEGERAVTVNSWFSGKKSILEEFSIGTIDHLLLMGLKQKHLFLRHLGMSGKVVVIDEVHAYDAYMDSYLTKALEWLGAYHVPVIALSATLPIATRSALIEAYCKGKYGKKKIEGALGWDKNQAYPLISVLDGKRLVQKSDFTRNTKGYAVAIERLTVEDGDLIKAVLEAVEDGGVAGVIVNTVKRVQMLASQIPEDIPKLILHSAFLAPDRAKIETKLQGLIGKHGKRPKKMIIIGTQVLEQSLDIDFDIMFTDIAPMDLLIQRIGRLHRHDIQRPSKLVTPQVKIMGINDYGDYGSANEAIYSKYLLMKTDQYLPEQLTIPDDISPLVQATYRDDGEMEPDLREAKRVFDVKHKEELDKAKKFQIKLPKQRESLHGWLDSELVDANKDEVRAQAAVRDIQETLEVLMVKQVKGDYYLLDGQQLEEVDSKTIAQQLIRIPAAVTPRIDKSIELLETQTAKSFPDWQADPWLKGALVVVLDEQNSAELGNWRIHYSRKFGLSYEKADDDEKQAF
>NZ_CP021104.1|WP_003683897.1|1486817_1487177_-|50S-ribosomal-protein-L19
MRQNQLIEKVTAGQLRSDIPAFRAGDTVRVHALIVEGTRERVQIFEGVVIKRHGAGISATYTVRKISNGIGVERTFPLHSPRVEKIEVVRYGRVRRAKLYYLRERTGKSARIAERRRDK
>NZ_CP021104.1|WP_024501037.1|1487297_1488725_-|amino-acid-permease
MKKLIARLLKQEDPSVYQLKDGQLEPTLRTIDLIGLGTGMVVGTAIFTLPGIVAAEHTGPAVPLAFIVAAIGAGLSALAYAETASVLPFAGSAFSWMNVLFGEFFGWIAGWALLAEYFISVAFVASGWSAYMQGFLASFGIKLPTALTGGFNPASGSYVDIFAAIAILAVGWLLSHGVHQVARIENTIVAIKLLVIILFIVVGATAIHTQNYHPFIPAHRPGTTFGGWTGIMAGASQIFIAYVGFDAIAANTAETKNPQKTMPRGLIGTLVLGTSFFIVVSLVLVGMFKYSRYANNAEPAAWALRESGHYLTANLLSVVALIGIFSALIAILLASSRLIYAFGRDGLLPSFLGHVDAKRVPNRALWTITVLAMILGSIFPFTFLATLVSAGTLVAFIFVSLGIYALRRREGKDLPEAQFKMPGYPILPAVSVIFSAVIFWNLNVDAKWMMVGWFAIGLLVYFLYGIRHSTLAKKG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP021104_1	1.7\|971933\|30\|NZ_CP021104\|PILER-CR,CRT	971933-971962	30	NZ_CP038154	Lactobacillus paracasei strain TCS plasmid unnamed, complete sequence	55308-55337	0	1.0
NZ_CP021104_1	1.7\|971933\|30\|NZ_CP021104\|PILER-CR,CRT	971933-971962	30	ARNV02000014	Lactobacillus paracasei strain LcY plasmid pYAK, complete sequence, whole genome shotgun sequence	24882-24911	0	1.0
NZ_CP021104_1	1.7\|971933\|30\|NZ_CP021104\|PILER-CR,CRT	971933-971962	30	AQPP01000018	Lactobacillus paracasei strain LcA plasmid pACT, complete sequence, whole genome shotgun sequence	24882-24911	0	1.0
NZ_CP021104_1	1.7\|971933\|30\|NZ_CP021104\|PILER-CR,CRT	971933-971962	30	NZ_CP025498	Lactobacillus paracasei subsp. tolerans strain 7112-2 plasmid p7112201, complete sequence	50917-50946	0	1.0
NZ_CP021104_1	1.7\|971933\|30\|NZ_CP021104\|PILER-CR,CRT	971933-971962	30	NC_020057	Lactobacillus casei W56 plasmid pW56, complete sequence	13582-13611	0	1.0
NZ_CP021104_1	1.7\|971933\|30\|NZ_CP021104\|PILER-CR,CRT	971933-971962	30	NC_017476	Lactobacillus paracasei plasmid pBD-II, complete sequence	13582-13611	0	1.0
NZ_CP021104_1	1.7\|971933\|30\|NZ_CP021104\|PILER-CR,CRT	971933-971962	30	NZ_CP041658	Lactobacillus paracasei strain CBA3611 plasmid pLP1, complete sequence	35102-35131	0	1.0
NZ_CP021104_1	1.27\|971934\|29\|NZ_CP021104\|CRISPRCasFinder	971934-971962	29	NC_020057	Lactobacillus casei W56 plasmid pW56, complete sequence	13582-13610	0	1.0
NZ_CP021104_1	1.27\|971934\|29\|NZ_CP021104\|CRISPRCasFinder	971934-971962	29	NC_017476	Lactobacillus paracasei plasmid pBD-II, complete sequence	13582-13610	0	1.0
NZ_CP021104_1	1.27\|971934\|29\|NZ_CP021104\|CRISPRCasFinder	971934-971962	29	NZ_CP041658	Lactobacillus paracasei strain CBA3611 plasmid pLP1, complete sequence	35102-35130	0	1.0
NZ_CP021104_1	1.27\|971934\|29\|NZ_CP021104\|CRISPRCasFinder	971934-971962	29	NZ_CP038154	Lactobacillus paracasei strain TCS plasmid unnamed, complete sequence	55309-55337	0	1.0
NZ_CP021104_1	1.27\|971934\|29\|NZ_CP021104\|CRISPRCasFinder	971934-971962	29	ARNV02000014	Lactobacillus paracasei strain LcY plasmid pYAK, complete sequence, whole genome shotgun sequence	24883-24911	0	1.0
NZ_CP021104_1	1.27\|971934\|29\|NZ_CP021104\|CRISPRCasFinder	971934-971962	29	AQPP01000018	Lactobacillus paracasei strain LcA plasmid pACT, complete sequence, whole genome shotgun sequence	24883-24911	0	1.0
NZ_CP021104_1	1.27\|971934\|29\|NZ_CP021104\|CRISPRCasFinder	971934-971962	29	NZ_CP025498	Lactobacillus paracasei subsp. tolerans strain 7112-2 plasmid p7112201, complete sequence	50918-50946	0	1.0
NZ_CP021104_2	2.21\|1477233\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477233-1477265	33	KP054477	Lactobacillus phage LfeInf, complete genome	63132-63164	0	1.0
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	MN830252	Lactobacillus phage JNU_P1, complete genome	44798-44827	1	0.967
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	MN830252	Lactobacillus phage JNU_P1, complete genome	44799-44827	1	0.966
NZ_CP021104_1	1.8\|971999\|30\|NZ_CP021104\|PILER-CR,CRT	971999-972028	30	NZ_CP038154	Lactobacillus paracasei strain TCS plasmid unnamed, complete sequence	56954-56983	2	0.933
NZ_CP021104_1	1.8\|971999\|30\|NZ_CP021104\|PILER-CR,CRT	971999-972028	30	ARNV02000014	Lactobacillus paracasei strain LcY plasmid pYAK, complete sequence, whole genome shotgun sequence	26528-26557	2	0.933
NZ_CP021104_1	1.8\|971999\|30\|NZ_CP021104\|PILER-CR,CRT	971999-972028	30	AQPP01000018	Lactobacillus paracasei strain LcA plasmid pACT, complete sequence, whole genome shotgun sequence	26528-26557	2	0.933
NZ_CP021104_1	1.8\|971999\|30\|NZ_CP021104\|PILER-CR,CRT	971999-972028	30	NZ_CP025498	Lactobacillus paracasei subsp. tolerans strain 7112-2 plasmid p7112201, complete sequence	52563-52592	2	0.933
NZ_CP021104_1	1.8\|971999\|30\|NZ_CP021104\|PILER-CR,CRT	971999-972028	30	NC_020057	Lactobacillus casei W56 plasmid pW56, complete sequence	11936-11965	2	0.933
NZ_CP021104_1	1.8\|971999\|30\|NZ_CP021104\|PILER-CR,CRT	971999-972028	30	NC_017476	Lactobacillus paracasei plasmid pBD-II, complete sequence	11936-11965	2	0.933
NZ_CP021104_1	1.8\|971999\|30\|NZ_CP021104\|PILER-CR,CRT	971999-972028	30	NZ_CP041658	Lactobacillus paracasei strain CBA3611 plasmid pLP1, complete sequence	33456-33485	2	0.933
NZ_CP021104_1	1.28\|972000\|29\|NZ_CP021104\|CRISPRCasFinder	972000-972028	29	NZ_CP038154	Lactobacillus paracasei strain TCS plasmid unnamed, complete sequence	56954-56982	2	0.931
NZ_CP021104_1	1.28\|972000\|29\|NZ_CP021104\|CRISPRCasFinder	972000-972028	29	ARNV02000014	Lactobacillus paracasei strain LcY plasmid pYAK, complete sequence, whole genome shotgun sequence	26528-26556	2	0.931
NZ_CP021104_1	1.28\|972000\|29\|NZ_CP021104\|CRISPRCasFinder	972000-972028	29	NC_020057	Lactobacillus casei W56 plasmid pW56, complete sequence	11937-11965	2	0.931
NZ_CP021104_1	1.28\|972000\|29\|NZ_CP021104\|CRISPRCasFinder	972000-972028	29	NC_017476	Lactobacillus paracasei plasmid pBD-II, complete sequence	11937-11965	2	0.931
NZ_CP021104_1	1.28\|972000\|29\|NZ_CP021104\|CRISPRCasFinder	972000-972028	29	NZ_CP041658	Lactobacillus paracasei strain CBA3611 plasmid pLP1, complete sequence	33457-33485	2	0.931
NZ_CP021104_1	1.28\|972000\|29\|NZ_CP021104\|CRISPRCasFinder	972000-972028	29	AQPP01000018	Lactobacillus paracasei strain LcA plasmid pACT, complete sequence, whole genome shotgun sequence	26528-26556	2	0.931
NZ_CP021104_1	1.28\|972000\|29\|NZ_CP021104\|CRISPRCasFinder	972000-972028	29	NZ_CP025498	Lactobacillus paracasei subsp. tolerans strain 7112-2 plasmid p7112201, complete sequence	52563-52591	2	0.931
NZ_CP021104_2	2.15\|1476866\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1476866-1476898	33	MN830252	Lactobacillus phage JNU_P1, complete genome	26269-26301	2	0.939
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	JX486088	Lactobacillus phage ATCC 8014-B2, complete genome	71876-71905	5	0.833
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	NC_021496	Lactobacillus reuteri I5007 plasmid pLRI02, complete sequence	2748-2776	5	0.828
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	JX486088	Lactobacillus phage ATCC 8014-B2, complete genome	71877-71905	5	0.828
NZ_CP021104_1	1.2\|971603\|30\|NZ_CP021104\|PILER-CR,CRT	971603-971632	30	KT997857	Uncultured Mediterranean phage uvDeep-CGR2-KM18-C269, complete genome	21395-21424	6	0.8
NZ_CP021104_1	1.3\|971669\|30\|NZ_CP021104\|PILER-CR,CRT	971669-971698	30	NZ_CP039967	Pseudorhodobacter sp. S12M18 plasmid unnamed3, complete sequence	18253-18282	6	0.8
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	NC_021496	Lactobacillus reuteri I5007 plasmid pLRI02, complete sequence	2748-2777	6	0.8
NZ_CP021104_1	1.20\|972791\|30\|NZ_CP021104\|PILER-CR,CRT	972791-972820	30	NZ_CP044217	Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence	263327-263356	6	0.8
NZ_CP021104_1	1.20\|972791\|30\|NZ_CP021104\|PILER-CR,CRT	972791-972820	30	MN694084	Marine virus AFVG_250M585, complete genome	7812-7841	6	0.8
NZ_CP021104_1	1.22\|971604\|29\|NZ_CP021104\|CRISPRCasFinder	971604-971632	29	MN693429	Marine virus AFVG_25M409, complete genome	19311-19339	6	0.793
NZ_CP021104_1	1.22\|971604\|29\|NZ_CP021104\|CRISPRCasFinder	971604-971632	29	KT997857	Uncultured Mediterranean phage uvDeep-CGR2-KM18-C269, complete genome	21396-21424	6	0.793
NZ_CP021104_1	1.23\|971670\|29\|NZ_CP021104\|CRISPRCasFinder	971670-971698	29	NZ_CP039967	Pseudorhodobacter sp. S12M18 plasmid unnamed3, complete sequence	18253-18281	6	0.793
NZ_CP021104_1	1.35\|972462\|29\|NZ_CP021104\|CRISPRCasFinder	972462-972490	29	NZ_CP032686	Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence	701753-701781	6	0.793
NZ_CP021104_1	1.35\|972462\|29\|NZ_CP021104\|CRISPRCasFinder	972462-972490	29	NZ_CP032691	Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence	693069-693097	6	0.793
NZ_CP021104_1	1.35\|972462\|29\|NZ_CP021104\|CRISPRCasFinder	972462-972490	29	NZ_CP039694	Agrobacterium larrymoorei strain CFBP5473 plasmid pTiCFBP5473, complete sequence	110-138	6	0.793
NZ_CP021104_1	1.40\|972792\|29\|NZ_CP021104\|CRISPRCasFinder	972792-972820	29	NZ_CP044217	Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence	263327-263355	6	0.793
NZ_CP021104_1	1.40\|972792\|29\|NZ_CP021104\|CRISPRCasFinder	972792-972820	29	MN694084	Marine virus AFVG_250M585, complete genome	7813-7841	6	0.793
NZ_CP021104_2	2.1\|1476013\|33\|NZ_CP021104\|CRISPRCasFinder	1476013-1476045	33	NZ_CP041164	Leisingera aquaemixtae strain R2C4 plasmid unnamed3, complete sequence	56818-56850	6	0.818
NZ_CP021104_1	1.2\|971603\|30\|NZ_CP021104\|PILER-CR,CRT	971603-971632	30	MN693429	Marine virus AFVG_25M409, complete genome	19311-19340	7	0.767
NZ_CP021104_1	1.15\|972461\|30\|NZ_CP021104\|PILER-CR,CRT	972461-972490	30	NZ_CP032686	Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence	701753-701782	7	0.767
NZ_CP021104_1	1.15\|972461\|30\|NZ_CP021104\|PILER-CR,CRT	972461-972490	30	NZ_CP032691	Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence	693069-693098	7	0.767
NZ_CP021104_1	1.15\|972461\|30\|NZ_CP021104\|PILER-CR,CRT	972461-972490	30	NZ_CP039694	Agrobacterium larrymoorei strain CFBP5473 plasmid pTiCFBP5473, complete sequence	110-139	7	0.767
NZ_CP021104_1	1.22\|971604\|29\|NZ_CP021104\|CRISPRCasFinder	971604-971632	29	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	168922-168950	7	0.759
NZ_CP021104_1	1.25\|971802\|29\|NZ_CP021104\|CRISPRCasFinder	971802-971830	29	MF768469	Pseudomonas phage SL4, complete genome	32780-32808	7	0.759
NZ_CP021104_1	1.25\|971802\|29\|NZ_CP021104\|CRISPRCasFinder	971802-971830	29	MN693154	Marine virus AFVG_25M214, complete genome	7844-7872	7	0.759
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	MK568540	Vibrio phage ValB1 HC, complete genome	209230-209258	7	0.759
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	KP671755	Vibrio phage ValKK3, complete genome	15515-15543	7	0.759
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	MT612989	Vibrio phage vB_ValM_R11Z, complete genome	228188-228216	7	0.759
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	KT919973	Vibrio phage phi-ST2, complete genome	38927-38955	7	0.759
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	NC_023568	Vibrio phage VH7D, complete genome	51429-51457	7	0.759
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	KT919972	Vibrio phage phi-Grn1, complete genome	226650-226678	7	0.759
NZ_CP021104_2	2.20\|1477172\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477172-1477204	33	MN689507	Lactococcus phage CHPC116, complete genome	1265-1297	7	0.788
NZ_CP021104_1	1.2\|971603\|30\|NZ_CP021104\|PILER-CR,CRT	971603-971632	30	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	168921-168950	8	0.733
NZ_CP021104_1	1.5\|971801\|30\|NZ_CP021104\|PILER-CR,CRT	971801-971830	30	MN693154	Marine virus AFVG_25M214, complete genome	7843-7872	8	0.733
NZ_CP021104_1	1.5\|971801\|30\|NZ_CP021104\|PILER-CR,CRT	971801-971830	30	MF768469	Pseudomonas phage SL4, complete genome	32780-32809	8	0.733
NZ_CP021104_1	1.16\|972527\|30\|NZ_CP021104\|PILER-CR,CRT	972527-972556	30	NZ_CP022605	Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence	192242-192271	8	0.733
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	MK568540	Vibrio phage ValB1 HC, complete genome	209230-209259	8	0.733
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	KP671755	Vibrio phage ValKK3, complete genome	15515-15544	8	0.733
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	KT919973	Vibrio phage phi-ST2, complete genome	38926-38955	8	0.733
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	NC_023568	Vibrio phage VH7D, complete genome	51428-51457	8	0.733
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	KY984068	Erwinia phage vB_EamM_Y3, complete genome	35124-35153	8	0.733
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	MT612989	Vibrio phage vB_ValM_R11Z, complete genome	228188-228217	8	0.733
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	KT919972	Vibrio phage phi-Grn1, complete genome	226649-226678	8	0.733
NZ_CP021104_1	1.35\|972462\|29\|NZ_CP021104\|CRISPRCasFinder	972462-972490	29	AP013468	Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51A-MedDCM-OCT-S42-C66	17425-17453	8	0.724
NZ_CP021104_1	1.35\|972462\|29\|NZ_CP021104\|CRISPRCasFinder	972462-972490	29	AP013467	Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51A-MedDCM-OCT-S39-C54	17732-17760	8	0.724
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	MT135024	Vibrio phage V05, complete genome	64534-64562	8	0.724
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	MT135026	Vibrio phage V09, complete genome	232572-232600	8	0.724
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	MN794232	Vibrio phage VH1_2019, complete genome	112130-112158	8	0.724
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	JN849462	Vibriophage phi-pp2, complete genome	111543-111571	8	0.724
NZ_CP021104_2	2.2\|1476074\|32\|NZ_CP021104\|CRISPRCasFinder,CRT	1476074-1476105	32	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	594586-594617	8	0.75
NZ_CP021104_2	2.2\|1476074\|32\|NZ_CP021104\|CRISPRCasFinder,CRT	1476074-1476105	32	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	455012-455043	8	0.75
NZ_CP021104_1	1.15\|972461\|30\|NZ_CP021104\|PILER-CR,CRT	972461-972490	30	AP013468	Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51A-MedDCM-OCT-S42-C66	17425-17454	9	0.7
NZ_CP021104_1	1.15\|972461\|30\|NZ_CP021104\|PILER-CR,CRT	972461-972490	30	AP013467	Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51A-MedDCM-OCT-S39-C54	17732-17761	9	0.7
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	MN794232	Vibrio phage VH1_2019, complete genome	112129-112158	9	0.7
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	JN849462	Vibriophage phi-pp2, complete genome	111542-111571	9	0.7
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	MT135024	Vibrio phage V05, complete genome	64534-64563	9	0.7
NZ_CP021104_1	1.19\|972725\|30\|NZ_CP021104\|PILER-CR,CRT	972725-972754	30	MT135026	Vibrio phage V09, complete genome	232572-232601	9	0.7
NZ_CP021104_1	1.24\|971736\|29\|NZ_CP021104\|CRISPRCasFinder	971736-971764	29	MH617669	Microviridae sp. isolate ctcb797, complete genome	739-767	9	0.69
NZ_CP021104_1	1.31\|972198\|29\|NZ_CP021104\|CRISPRCasFinder	972198-972226	29	MK448692	Streptococcus phage Javan173, complete genome	30640-30668	9	0.69
NZ_CP021104_1	1.36\|972528\|29\|NZ_CP021104\|CRISPRCasFinder	972528-972556	29	NZ_CP022605	Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence	192243-192271	9	0.69
NZ_CP021104_1	1.39\|972726\|29\|NZ_CP021104\|CRISPRCasFinder	972726-972754	29	KY984068	Erwinia phage vB_EamM_Y3, complete genome	35125-35153	9	0.69
NZ_CP021104_2	2.18\|1477050\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477050-1477082	33	KJ538722	Mycobacterium phage HH92, complete genome	19939-19971	9	0.727
NZ_CP021104_2	2.18\|1477050\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477050-1477082	33	KT222940	Mycobacterium phage Kinbote, complete genome	19939-19971	9	0.727
NZ_CP021104_2	2.18\|1477050\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477050-1477082	33	MK919482	Mycobacterium phage DeepSoil15, complete genome	19939-19971	9	0.727
NZ_CP021104_2	2.18\|1477050\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477050-1477082	33	MT657330	Mycobacterium phage Webster2, complete genome	19939-19971	9	0.727
NZ_CP021104_2	2.18\|1477050\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477050-1477082	33	MF919517	Mycobacterium phage LilHazelnut, complete genome	19939-19971	9	0.727
NZ_CP021104_2	2.18\|1477050\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477050-1477082	33	EU203571	Mycobacterium phage Giles, complete genome	19939-19971	9	0.727
NZ_CP021104_2	2.18\|1477050\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477050-1477082	33	MT818421	Mycobacterium phage Luke, complete genome	19939-19971	9	0.727
NZ_CP021104_2	2.18\|1477050\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477050-1477082	33	MT684594	Mycobacterium phage Hadrien, complete genome	19939-19971	9	0.727
NZ_CP021104_2	2.18\|1477050\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477050-1477082	33	MT114159	Mycobacterium phage Ein37, complete genome	19939-19971	9	0.727
NZ_CP021104_2	2.18\|1477050\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477050-1477082	33	KT246485	Mycobacterium phage OBUpride, complete genome	19933-19965	9	0.727
NZ_CP021104_2	2.18\|1477050\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477050-1477082	33	KT454972	Mycobacterium phage Evanesce, complete genome	19939-19971	9	0.727
NZ_CP021104_1	1.4\|971735\|30\|NZ_CP021104\|PILER-CR,CRT	971735-971764	30	MH617669	Microviridae sp. isolate ctcb797, complete genome	738-767	10	0.667
NZ_CP021104_1	1.11\|972197\|30\|NZ_CP021104\|PILER-CR,CRT	972197-972226	30	MK448692	Streptococcus phage Javan173, complete genome	30640-30669	10	0.667
NZ_CP021104_2	2.19\|1477111\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477111-1477143	33	NZ_CP027106	Escherichia coli strain RM14721 plasmid pRM14721, complete sequence	29950-29982	10	0.697
NZ_CP021104_2	2.20\|1477172\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477172-1477204	33	MH779524	Lactococcus phage vB_Llc_bIBBD4, complete genome	1539-1571	10	0.697
NZ_CP021104_2	2.20\|1477172\|33\|NZ_CP021104\|CRISPRCasFinder,CRT,PILER-CR	1477172-1477204	33	MH779526	Lactococcus phage vB_Llc_bIBBL81, complete genome	1539-1571	10	0.697

1. spacer 1.7|971933|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP038154 (Lactobacillus paracasei strain TCS plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gagtaacagtggctttacgcgtgagagtac	CRISPR spacer
gagtaacagtggctttacgcgtgagagtac	Protospacer
******************************

2. spacer 1.7|971933|30|NZ_CP021104|PILER-CR,CRT matches to ARNV02000014 (Lactobacillus paracasei strain LcY plasmid pYAK, complete sequence, whole genome shotgun sequence) position: , mismatch: 0, identity: 1.0

gagtaacagtggctttacgcgtgagagtac	CRISPR spacer
gagtaacagtggctttacgcgtgagagtac	Protospacer
******************************

3. spacer 1.7|971933|30|NZ_CP021104|PILER-CR,CRT matches to AQPP01000018 (Lactobacillus paracasei strain LcA plasmid pACT, complete sequence, whole genome shotgun sequence) position: , mismatch: 0, identity: 1.0

gagtaacagtggctttacgcgtgagagtac	CRISPR spacer
gagtaacagtggctttacgcgtgagagtac	Protospacer
******************************

4. spacer 1.7|971933|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP025498 (Lactobacillus paracasei subsp. tolerans strain 7112-2 plasmid p7112201, complete sequence) position: , mismatch: 0, identity: 1.0

gagtaacagtggctttacgcgtgagagtac	CRISPR spacer
gagtaacagtggctttacgcgtgagagtac	Protospacer
******************************

5. spacer 1.7|971933|30|NZ_CP021104|PILER-CR,CRT matches to NC_020057 (Lactobacillus casei W56 plasmid pW56, complete sequence) position: , mismatch: 0, identity: 1.0

gagtaacagtggctttacgcgtgagagtac	CRISPR spacer
gagtaacagtggctttacgcgtgagagtac	Protospacer
******************************

6. spacer 1.7|971933|30|NZ_CP021104|PILER-CR,CRT matches to NC_017476 (Lactobacillus paracasei plasmid pBD-II, complete sequence) position: , mismatch: 0, identity: 1.0

gagtaacagtggctttacgcgtgagagtac	CRISPR spacer
gagtaacagtggctttacgcgtgagagtac	Protospacer
******************************

7. spacer 1.7|971933|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP041658 (Lactobacillus paracasei strain CBA3611 plasmid pLP1, complete sequence) position: , mismatch: 0, identity: 1.0

gagtaacagtggctttacgcgtgagagtac	CRISPR spacer
gagtaacagtggctttacgcgtgagagtac	Protospacer
******************************

8. spacer 1.27|971934|29|NZ_CP021104|CRISPRCasFinder matches to NC_020057 (Lactobacillus casei W56 plasmid pW56, complete sequence) position: , mismatch: 0, identity: 1.0

agtaacagtggctttacgcgtgagagtac	CRISPR spacer
agtaacagtggctttacgcgtgagagtac	Protospacer
*****************************

9. spacer 1.27|971934|29|NZ_CP021104|CRISPRCasFinder matches to NC_017476 (Lactobacillus paracasei plasmid pBD-II, complete sequence) position: , mismatch: 0, identity: 1.0

agtaacagtggctttacgcgtgagagtac	CRISPR spacer
agtaacagtggctttacgcgtgagagtac	Protospacer
*****************************

10. spacer 1.27|971934|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP041658 (Lactobacillus paracasei strain CBA3611 plasmid pLP1, complete sequence) position: , mismatch: 0, identity: 1.0

agtaacagtggctttacgcgtgagagtac	CRISPR spacer
agtaacagtggctttacgcgtgagagtac	Protospacer
*****************************

11. spacer 1.27|971934|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP038154 (Lactobacillus paracasei strain TCS plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

agtaacagtggctttacgcgtgagagtac	CRISPR spacer
agtaacagtggctttacgcgtgagagtac	Protospacer
*****************************

12. spacer 1.27|971934|29|NZ_CP021104|CRISPRCasFinder matches to ARNV02000014 (Lactobacillus paracasei strain LcY plasmid pYAK, complete sequence, whole genome shotgun sequence) position: , mismatch: 0, identity: 1.0

agtaacagtggctttacgcgtgagagtac	CRISPR spacer
agtaacagtggctttacgcgtgagagtac	Protospacer
*****************************

13. spacer 1.27|971934|29|NZ_CP021104|CRISPRCasFinder matches to AQPP01000018 (Lactobacillus paracasei strain LcA plasmid pACT, complete sequence, whole genome shotgun sequence) position: , mismatch: 0, identity: 1.0

agtaacagtggctttacgcgtgagagtac	CRISPR spacer
agtaacagtggctttacgcgtgagagtac	Protospacer
*****************************

14. spacer 1.27|971934|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP025498 (Lactobacillus paracasei subsp. tolerans strain 7112-2 plasmid p7112201, complete sequence) position: , mismatch: 0, identity: 1.0

agtaacagtggctttacgcgtgagagtac	CRISPR spacer
agtaacagtggctttacgcgtgagagtac	Protospacer
*****************************

15. spacer 2.21|1477233|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 0, identity: 1.0

tcagaattggtatcgacagatacggccatttag	CRISPR spacer
tcagaattggtatcgacagatacggccatttag	Protospacer
*********************************

16. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to MN830252 (Lactobacillus phage JNU_P1, complete genome) position: , mismatch: 1, identity: 0.967

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
ctatcaaagctgaacagtttgatggttctc	Protospacer
*******************.**********

17. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to MN830252 (Lactobacillus phage JNU_P1, complete genome) position: , mismatch: 1, identity: 0.966

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
tatcaaagctgaacagtttgatggttctc	Protospacer
******************.**********

18. spacer 1.8|971999|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP038154 (Lactobacillus paracasei strain TCS plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.933

accaggttttgcgtaacttgattgacgcca	CRISPR spacer
actaggttttgagtaacttgattgacgcca	Protospacer
**.******** ******************

19. spacer 1.8|971999|30|NZ_CP021104|PILER-CR,CRT matches to ARNV02000014 (Lactobacillus paracasei strain LcY plasmid pYAK, complete sequence, whole genome shotgun sequence) position: , mismatch: 2, identity: 0.933

accaggttttgcgtaacttgattgacgcca	CRISPR spacer
actaggttttgagtaacttgattgacgcca	Protospacer
**.******** ******************

20. spacer 1.8|971999|30|NZ_CP021104|PILER-CR,CRT matches to AQPP01000018 (Lactobacillus paracasei strain LcA plasmid pACT, complete sequence, whole genome shotgun sequence) position: , mismatch: 2, identity: 0.933

accaggttttgcgtaacttgattgacgcca	CRISPR spacer
actaggttttgagtaacttgattgacgcca	Protospacer
**.******** ******************

21. spacer 1.8|971999|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP025498 (Lactobacillus paracasei subsp. tolerans strain 7112-2 plasmid p7112201, complete sequence) position: , mismatch: 2, identity: 0.933

accaggttttgcgtaacttgattgacgcca	CRISPR spacer
actaggttttgagtaacttgattgacgcca	Protospacer
**.******** ******************

22. spacer 1.8|971999|30|NZ_CP021104|PILER-CR,CRT matches to NC_020057 (Lactobacillus casei W56 plasmid pW56, complete sequence) position: , mismatch: 2, identity: 0.933

accaggttttgcgtaacttgattgacgcca	CRISPR spacer
actaggttttgagtaacttgattgacgcca	Protospacer
**.******** ******************

23. spacer 1.8|971999|30|NZ_CP021104|PILER-CR,CRT matches to NC_017476 (Lactobacillus paracasei plasmid pBD-II, complete sequence) position: , mismatch: 2, identity: 0.933

accaggttttgcgtaacttgattgacgcca	CRISPR spacer
actaggttttgagtaacttgattgacgcca	Protospacer
**.******** ******************

24. spacer 1.8|971999|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP041658 (Lactobacillus paracasei strain CBA3611 plasmid pLP1, complete sequence) position: , mismatch: 2, identity: 0.933

accaggttttgcgtaacttgattgacgcca	CRISPR spacer
actaggttttgagtaacttgattgacgcca	Protospacer
**.******** ******************

25. spacer 1.28|972000|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP038154 (Lactobacillus paracasei strain TCS plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.931

ccaggttttgcgtaacttgattgacgcca	CRISPR spacer
ctaggttttgagtaacttgattgacgcca	Protospacer
*.******** ******************

26. spacer 1.28|972000|29|NZ_CP021104|CRISPRCasFinder matches to ARNV02000014 (Lactobacillus paracasei strain LcY plasmid pYAK, complete sequence, whole genome shotgun sequence) position: , mismatch: 2, identity: 0.931

ccaggttttgcgtaacttgattgacgcca	CRISPR spacer
ctaggttttgagtaacttgattgacgcca	Protospacer
*.******** ******************

27. spacer 1.28|972000|29|NZ_CP021104|CRISPRCasFinder matches to NC_020057 (Lactobacillus casei W56 plasmid pW56, complete sequence) position: , mismatch: 2, identity: 0.931

ccaggttttgcgtaacttgattgacgcca	CRISPR spacer
ctaggttttgagtaacttgattgacgcca	Protospacer
*.******** ******************

28. spacer 1.28|972000|29|NZ_CP021104|CRISPRCasFinder matches to NC_017476 (Lactobacillus paracasei plasmid pBD-II, complete sequence) position: , mismatch: 2, identity: 0.931

ccaggttttgcgtaacttgattgacgcca	CRISPR spacer
ctaggttttgagtaacttgattgacgcca	Protospacer
*.******** ******************

29. spacer 1.28|972000|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP041658 (Lactobacillus paracasei strain CBA3611 plasmid pLP1, complete sequence) position: , mismatch: 2, identity: 0.931

ccaggttttgcgtaacttgattgacgcca	CRISPR spacer
ctaggttttgagtaacttgattgacgcca	Protospacer
*.******** ******************

30. spacer 1.28|972000|29|NZ_CP021104|CRISPRCasFinder matches to AQPP01000018 (Lactobacillus paracasei strain LcA plasmid pACT, complete sequence, whole genome shotgun sequence) position: , mismatch: 2, identity: 0.931

ccaggttttgcgtaacttgattgacgcca	CRISPR spacer
ctaggttttgagtaacttgattgacgcca	Protospacer
*.******** ******************

31. spacer 1.28|972000|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP025498 (Lactobacillus paracasei subsp. tolerans strain 7112-2 plasmid p7112201, complete sequence) position: , mismatch: 2, identity: 0.931

ccaggttttgcgtaacttgattgacgcca	CRISPR spacer
ctaggttttgagtaacttgattgacgcca	Protospacer
*.******** ******************

32. spacer 2.15|1476866|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to MN830252 (Lactobacillus phage JNU_P1, complete genome) position: , mismatch: 2, identity: 0.939

caatcgtctgatcttgtgagttgacgagtgctg	CRISPR spacer
caatcgtctgatcttgcgagttgacgagtgccg	Protospacer
****************.**************.*

33. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to JX486088 (Lactobacillus phage ATCC 8014-B2, complete genome) position: , mismatch: 5, identity: 0.833

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
ctatcaaggcggaacagttcgatggtagtg	Protospacer
*******.** ***************  *

34. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to NC_021496 (Lactobacillus reuteri I5007 plasmid pLRI02, complete sequence) position: , mismatch: 5, identity: 0.828

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
aatcgaagctgaacagttcgatgggtcaa	Protospacer
 ***.******************* **

35. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to JX486088 (Lactobacillus phage ATCC 8014-B2, complete genome) position: , mismatch: 5, identity: 0.828

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
tatcaaggcggaacagttcgatggtagtg	Protospacer
******.** ***************  *

36. spacer 1.2|971603|30|NZ_CP021104|PILER-CR,CRT matches to KT997857 (Uncultured Mediterranean phage uvDeep-CGR2-KM18-C269, complete genome) position: , mismatch: 6, identity: 0.8

atctttacggtttcagcatcaccatcttct	CRISPR spacer
ataagtccagtttcagcatcatcatcttct	Protospacer
**   * *.************.********

37. spacer 1.3|971669|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP039967 (Pseudorhodobacter sp. S12M18 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

aacggactgatgcaatgttagacgcccttt	CRISPR spacer
agcgctttgacgcaatgtgagacgcccttt	Protospacer
*.**  .***.******* ***********

38. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to NC_021496 (Lactobacillus reuteri I5007 plasmid pLRI02, complete sequence) position: , mismatch: 6, identity: 0.8

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
taatcgaagctgaacagttcgatgggtcaa	Protospacer
. ***.******************* **

39. spacer 1.20|972791|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP044217 (Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcagtgccacgcatgaccacttcatag	CRISPR spacer
tccgcagtgccacgcatgactactttatca	Protospacer
**  ****************.****.** .

40. spacer 1.20|972791|30|NZ_CP021104|PILER-CR,CRT matches to MN694084 (Marine virus AFVG_250M585, complete genome) position: , mismatch: 6, identity: 0.8

tcgtcagtgccacgcatgaccacttcatag	CRISPR spacer
tggtcaattccacgcatgaccacttatcag	Protospacer
* ****.* ****************  .**

41. spacer 1.22|971604|29|NZ_CP021104|CRISPRCasFinder matches to MN693429 (Marine virus AFVG_25M409, complete genome) position: , mismatch: 6, identity: 0.793

tctttacggtttcagcatcaccatcttct	CRISPR spacer
ctataacagtttcagcagcaccatcttct	Protospacer
.. * **.********* ***********

42. spacer 1.22|971604|29|NZ_CP021104|CRISPRCasFinder matches to KT997857 (Uncultured Mediterranean phage uvDeep-CGR2-KM18-C269, complete genome) position: , mismatch: 6, identity: 0.793

tctttacggtttcagcatcaccatcttct	CRISPR spacer
taagtccagtttcagcatcatcatcttct	Protospacer
*   * *.************.********

43. spacer 1.23|971670|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP039967 (Pseudorhodobacter sp. S12M18 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.793

acggactgatgcaatgttagacgcccttt	CRISPR spacer
gcgctttgacgcaatgtgagacgcccttt	Protospacer
.**  .***.******* ***********

44. spacer 1.35|972462|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP032686 (Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence) position: , mismatch: 6, identity: 0.793

ggaacgaagcgacttccgcgcgatcgaag	CRISPR spacer
tggtcgaagcggcttccgcgagatcgacg	Protospacer
 *. *******.******** ****** *

45. spacer 1.35|972462|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP032691 (Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence) position: , mismatch: 6, identity: 0.793

ggaacgaagcgacttccgcgcgatcgaag	CRISPR spacer
tggtcgaagcggcttccgcgagatcgacg	Protospacer
 *. *******.******** ****** *

46. spacer 1.35|972462|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP039694 (Agrobacterium larrymoorei strain CFBP5473 plasmid pTiCFBP5473, complete sequence) position: , mismatch: 6, identity: 0.793

ggaacgaagcgacttccgcgcgatcgaag	CRISPR spacer
tgagcgaagcgacttctgcgcgattggcg	Protospacer
 **.************.*******.*. *

47. spacer 1.40|972792|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP044217 (Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

cgtcagtgccacgcatgaccacttcatag	CRISPR spacer
ccgcagtgccacgcatgactactttatca	Protospacer
*  ****************.****.** .

48. spacer 1.40|972792|29|NZ_CP021104|CRISPRCasFinder matches to MN694084 (Marine virus AFVG_250M585, complete genome) position: , mismatch: 6, identity: 0.793

cgtcagtgccacgcatgaccacttcatag	CRISPR spacer
ggtcaattccacgcatgaccacttatcag	Protospacer
 ****.* ****************  .**

49. spacer 2.1|1476013|33|NZ_CP021104|CRISPRCasFinder matches to NZ_CP041164 (Leisingera aquaemixtae strain R2C4 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.818

-cgaggcacacggagacagggatcccggcaagca	CRISPR spacer
acgtgg-gcccggagacagagatcccggccagca	Protospacer
 ** ** .* *********.********* ****

50. spacer 1.2|971603|30|NZ_CP021104|PILER-CR,CRT matches to MN693429 (Marine virus AFVG_25M409, complete genome) position: , mismatch: 7, identity: 0.767

atctttacggtttcagcatcaccatcttct	CRISPR spacer
cctataacagtttcagcagcaccatcttct	Protospacer
 .. * **.********* ***********

51. spacer 1.15|972461|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP032686 (Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence) position: , mismatch: 7, identity: 0.767

gggaacgaagcgacttccgcgcgatcgaag	CRISPR spacer
ctggtcgaagcggcttccgcgagatcgacg	Protospacer
  *. *******.******** ****** *

52. spacer 1.15|972461|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP032691 (Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence) position: , mismatch: 7, identity: 0.767

gggaacgaagcgacttccgcgcgatcgaag	CRISPR spacer
ctggtcgaagcggcttccgcgagatcgacg	Protospacer
  *. *******.******** ****** *

53. spacer 1.15|972461|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP039694 (Agrobacterium larrymoorei strain CFBP5473 plasmid pTiCFBP5473, complete sequence) position: , mismatch: 7, identity: 0.767

gggaacgaagcgacttccgcgcgatcgaag	CRISPR spacer
atgagcgaagcgacttctgcgcgattggcg	Protospacer
. **.************.*******.*. *

54. spacer 1.22|971604|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 7, identity: 0.759

tctttacggtttcagcatcaccatcttct	CRISPR spacer
gcaataaggtttcagcataaccatcttga	Protospacer
 *  ** *********** ********

55. spacer 1.25|971802|29|NZ_CP021104|CRISPRCasFinder matches to MF768469 (Pseudomonas phage SL4, complete genome) position: , mismatch: 7, identity: 0.759

taatgatgcgctgaaaggcattgccagtc	CRISPR spacer
aagcgatacgctgaaaggcattgcctatg	Protospacer
 *..***.***************** .*

56. spacer 1.25|971802|29|NZ_CP021104|CRISPRCasFinder matches to MN693154 (Marine virus AFVG_25M214, complete genome) position: , mismatch: 7, identity: 0.759

taatgatgcgctgaaaggcattgccagtc	CRISPR spacer
taatgatgtgctgataggcattgtcttgg	Protospacer
********.***** ********.*

57. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to MK568540 (Vibrio phage ValB1 HC, complete genome) position: , mismatch: 7, identity: 0.759

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
tatcaacgttgaacagttcgatgatatat	Protospacer
****** *.**************.* . .

58. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to KP671755 (Vibrio phage ValKK3, complete genome) position: , mismatch: 7, identity: 0.759

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
tatcaacgttgaacagttcgatgatatat	Protospacer
****** *.**************.* . .

59. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to MT612989 (Vibrio phage vB_ValM_R11Z, complete genome) position: , mismatch: 7, identity: 0.759

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
tatcaacgttgaacagttcgatgatatat	Protospacer
****** *.**************.* . .

60. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to KT919973 (Vibrio phage phi-ST2, complete genome) position: , mismatch: 7, identity: 0.759

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
tatcaacgttgaacagttcgatgatatat	Protospacer
****** *.**************.* . .

61. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to NC_023568 (Vibrio phage VH7D, complete genome) position: , mismatch: 7, identity: 0.759

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
tatcaacgttgaacagttcgatgatatat	Protospacer
****** *.**************.* . .

62. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to KT919972 (Vibrio phage phi-Grn1, complete genome) position: , mismatch: 7, identity: 0.759

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
tatcaacgttgaacagttcgatgatatat	Protospacer
****** *.**************.* . .

63. spacer 2.20|1477172|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to MN689507 (Lactococcus phage CHPC116, complete genome) position: , mismatch: 7, identity: 0.788

caggtaggcaacaattcaacca-ttacctttggg	CRISPR spacer
caagtaagcaacaattcaaccatttatcagtcg-	Protospacer
**.***.*************** ***.*  * *

64. spacer 1.2|971603|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 8, identity: 0.733

atctttacggtttcagcatcaccatcttct	CRISPR spacer
cgcaataaggtttcagcataaccatcttga	Protospacer
  *  ** *********** ********

65. spacer 1.5|971801|30|NZ_CP021104|PILER-CR,CRT matches to MN693154 (Marine virus AFVG_25M214, complete genome) position: , mismatch: 8, identity: 0.733

ttaatgatgcgctgaaaggcattgccagtc	CRISPR spacer
ataatgatgtgctgataggcattgtcttgg	Protospacer
 ********.***** ********.*

66. spacer 1.5|971801|30|NZ_CP021104|PILER-CR,CRT matches to MF768469 (Pseudomonas phage SL4, complete genome) position: , mismatch: 8, identity: 0.733

ttaatgatgcgctgaaaggcattgccagtc	CRISPR spacer
caagcgatacgctgaaaggcattgcctatg	Protospacer
. *..***.***************** .*

67. spacer 1.16|972527|30|NZ_CP021104|PILER-CR,CRT matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aattga--catccggctttttgaggccagaca	CRISPR spacer
--tcggctcatccggcattttgaggccagctg	Protospacer
  *.*.  ******** ************ ..

68. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to MK568540 (Vibrio phage ValB1 HC, complete genome) position: , mismatch: 8, identity: 0.733

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
atatcaacgttgaacagttcgatgatatat	Protospacer
 ****** *.**************.* . .

69. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to KP671755 (Vibrio phage ValKK3, complete genome) position: , mismatch: 8, identity: 0.733

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
atatcaacgttgaacagttcgatgatatat	Protospacer
 ****** *.**************.* . .

70. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to KT919973 (Vibrio phage phi-ST2, complete genome) position: , mismatch: 8, identity: 0.733

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
atatcaacgttgaacagttcgatgatatat	Protospacer
 ****** *.**************.* . .

71. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to NC_023568 (Vibrio phage VH7D, complete genome) position: , mismatch: 8, identity: 0.733

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
atatcaacgttgaacagttcgatgatatat	Protospacer
 ****** *.**************.* . .

72. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to KY984068 (Erwinia phage vB_EamM_Y3, complete genome) position: , mismatch: 8, identity: 0.733

-----ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
actcgct-----tgctgaacagttagatggttctg	Protospacer
     **      *********** *********

73. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to MT612989 (Vibrio phage vB_ValM_R11Z, complete genome) position: , mismatch: 8, identity: 0.733

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
atatcaacgttgaacagttcgatgatatat	Protospacer
 ****** *.**************.* . .

74. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to KT919972 (Vibrio phage phi-Grn1, complete genome) position: , mismatch: 8, identity: 0.733

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
atatcaacgttgaacagttcgatgatatat	Protospacer
 ****** *.**************.* . .

75. spacer 1.35|972462|29|NZ_CP021104|CRISPRCasFinder matches to AP013468 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51A-MedDCM-OCT-S42-C66) position: , mismatch: 8, identity: 0.724

ggaacgaagcgacttccgcgcgatcgaag	CRISPR spacer
accattcagcgacttccgcgcgaacgaat	Protospacer
.  *.  **************** ****

76. spacer 1.35|972462|29|NZ_CP021104|CRISPRCasFinder matches to AP013467 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51A-MedDCM-OCT-S39-C54) position: , mismatch: 8, identity: 0.724

ggaacgaagcgacttccgcgcgatcgaag	CRISPR spacer
accattcagcgacttccgcgcgaacgaat	Protospacer
.  *.  **************** ****

77. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to MT135024 (Vibrio phage V05, complete genome) position: , mismatch: 8, identity: 0.724

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
tatcaacgttgaacagttcgatgaaatct	Protospacer
****** *.**************.  ...

78. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to MT135026 (Vibrio phage V09, complete genome) position: , mismatch: 8, identity: 0.724

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
tatcaacgttgaacagttcgatgaaatct	Protospacer
****** *.**************.  ...

79. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to MN794232 (Vibrio phage VH1_2019, complete genome) position: , mismatch: 8, identity: 0.724

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
tatcaatgttgaacagttcgatgaaatct	Protospacer
****** *.**************.  ...

80. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to JN849462 (Vibriophage phi-pp2, complete genome) position: , mismatch: 8, identity: 0.724

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
tatcaacgttgaacagttcgatgaaatct	Protospacer
****** *.**************.  ...

81. spacer 2.2|1476074|32|NZ_CP021104|CRISPRCasFinder,CRT matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

cggggatggcgatcagcctcttccacatgtcg	CRISPR spacer
cggggctcgcgatcagcctcttccccgatttc	Protospacer
***** * **************** *.  *.

82. spacer 2.2|1476074|32|NZ_CP021104|CRISPRCasFinder,CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 8, identity: 0.75

cggggatggcgatcagcctcttccacatgtcg	CRISPR spacer
cggggctcgcgatcagcctcttccccgatttc	Protospacer
***** * **************** *.  *.

83. spacer 1.15|972461|30|NZ_CP021104|PILER-CR,CRT matches to AP013468 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51A-MedDCM-OCT-S42-C66) position: , mismatch: 9, identity: 0.7

gggaacgaagcgacttccgcgcgatcgaag	CRISPR spacer
caccattcagcgacttccgcgcgaacgaat	Protospacer
 .  *.  **************** ****

84. spacer 1.15|972461|30|NZ_CP021104|PILER-CR,CRT matches to AP013467 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51A-MedDCM-OCT-S39-C54) position: , mismatch: 9, identity: 0.7

gggaacgaagcgacttccgcgcgatcgaag	CRISPR spacer
caccattcagcgacttccgcgcgaacgaat	Protospacer
 .  *.  **************** ****

85. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to MN794232 (Vibrio phage VH1_2019, complete genome) position: , mismatch: 9, identity: 0.7

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
atatcaatgttgaacagttcgatgaaatct	Protospacer
 ****** *.**************.  ...

86. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to JN849462 (Vibriophage phi-pp2, complete genome) position: , mismatch: 9, identity: 0.7

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
atatcaacgttgaacagttcgatgaaatct	Protospacer
 ****** *.**************.  ...

87. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to MT135024 (Vibrio phage V05, complete genome) position: , mismatch: 9, identity: 0.7

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
atatcaacgttgaacagttcgatgaaatct	Protospacer
 ****** *.**************.  ...

88. spacer 1.19|972725|30|NZ_CP021104|PILER-CR,CRT matches to MT135026 (Vibrio phage V09, complete genome) position: , mismatch: 9, identity: 0.7

ctatcaaagctgaacagttcgatggttctc	CRISPR spacer
atatcaacgttgaacagttcgatgaaatct	Protospacer
 ****** *.**************.  ...

89. spacer 1.24|971736|29|NZ_CP021104|CRISPRCasFinder matches to MH617669 (Microviridae sp. isolate ctcb797, complete genome) position: , mismatch: 9, identity: 0.69

aaatatactcaatttgatacccagggtgt	CRISPR spacer
ggtgatattcaatttgatacccaggcatc	Protospacer
..  ***.*****************   .

90. spacer 1.31|972198|29|NZ_CP021104|CRISPRCasFinder matches to MK448692 (Streptococcus phage Javan173, complete genome) position: , mismatch: 9, identity: 0.69

attacctttacctttcttgttgtataccg	CRISPR spacer
attacctttacctttcttcttaagacttt	Protospacer
****************** **. .  ..

91. spacer 1.36|972528|29|NZ_CP021104|CRISPRCasFinder matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.69

attgacatccggctttttgaggccagaca	CRISPR spacer
cggctcatccggcattttgaggccagctg	Protospacer
     ******** ************ ..

92. spacer 1.39|972726|29|NZ_CP021104|CRISPRCasFinder matches to KY984068 (Erwinia phage vB_EamM_Y3, complete genome) position: , mismatch: 9, identity: 0.69

tatcaaagctgaacagttcgatggttctc	CRISPR spacer
ctcgcttgctgaacagttagatggttctg	Protospacer
. .    *********** *********

93. spacer 2.18|1477050|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to KJ538722 (Mycobacterium phage HH92, complete genome) position: , mismatch: 9, identity: 0.727

caacttctggagtggcaatcgatgataaccaaa	CRISPR spacer
tggcggccggagtggcaatcgacgatcaccaac	Protospacer
...*  *.**************.*** *****

94. spacer 2.18|1477050|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to KT222940 (Mycobacterium phage Kinbote, complete genome) position: , mismatch: 9, identity: 0.727

caacttctggagtggcaatcgatgataaccaaa	CRISPR spacer
tggcggccggagtggcaatcgacgatcaccaac	Protospacer
...*  *.**************.*** *****

95. spacer 2.18|1477050|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to MK919482 (Mycobacterium phage DeepSoil15, complete genome) position: , mismatch: 9, identity: 0.727

caacttctggagtggcaatcgatgataaccaaa	CRISPR spacer
tggcggccggagtggcaatcgacgatcaccaac	Protospacer
...*  *.**************.*** *****

96. spacer 2.18|1477050|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to MT657330 (Mycobacterium phage Webster2, complete genome) position: , mismatch: 9, identity: 0.727

caacttctggagtggcaatcgatgataaccaaa	CRISPR spacer
tggcggccggagtggcaatcgacgatcaccaac	Protospacer
...*  *.**************.*** *****

97. spacer 2.18|1477050|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to MF919517 (Mycobacterium phage LilHazelnut, complete genome) position: , mismatch: 9, identity: 0.727

caacttctggagtggcaatcgatgataaccaaa	CRISPR spacer
tggcggccggagtggcaatcgacgatcaccaac	Protospacer
...*  *.**************.*** *****

98. spacer 2.18|1477050|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to EU203571 (Mycobacterium phage Giles, complete genome) position: , mismatch: 9, identity: 0.727

caacttctggagtggcaatcgatgataaccaaa	CRISPR spacer
tggcggccggagtggcaatcgacgatcaccaac	Protospacer
...*  *.**************.*** *****

99. spacer 2.18|1477050|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to MT818421 (Mycobacterium phage Luke, complete genome) position: , mismatch: 9, identity: 0.727

caacttctggagtggcaatcgatgataaccaaa	CRISPR spacer
tggcggccggagtggcaatcgacgatcaccaac	Protospacer
...*  *.**************.*** *****

100. spacer 2.18|1477050|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to MT684594 (Mycobacterium phage Hadrien, complete genome) position: , mismatch: 9, identity: 0.727

caacttctggagtggcaatcgatgataaccaaa	CRISPR spacer
tggcggccggagtggcaatcgacgatcaccaac	Protospacer
...*  *.**************.*** *****

101. spacer 2.18|1477050|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to MT114159 (Mycobacterium phage Ein37, complete genome) position: , mismatch: 9, identity: 0.727

caacttctggagtggcaatcgatgataaccaaa	CRISPR spacer
tggcggccggagtggcaatcgacgatcaccaac	Protospacer
...*  *.**************.*** *****

102. spacer 2.18|1477050|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to KT246485 (Mycobacterium phage OBUpride, complete genome) position: , mismatch: 9, identity: 0.727

caacttctggagtggcaatcgatgataaccaaa	CRISPR spacer
tggcggccggagtggcaatcgacgatcaccaac	Protospacer
...*  *.**************.*** *****

103. spacer 2.18|1477050|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to KT454972 (Mycobacterium phage Evanesce, complete genome) position: , mismatch: 9, identity: 0.727

caacttctggagtggcaatcgatgataaccaaa	CRISPR spacer
tggcggccggagtggcaatcgacgatcaccaac	Protospacer
...*  *.**************.*** *****

104. spacer 1.4|971735|30|NZ_CP021104|PILER-CR,CRT matches to MH617669 (Microviridae sp. isolate ctcb797, complete genome) position: , mismatch: 10, identity: 0.667

aaaatatactcaatttgatacccagggtgt	CRISPR spacer
tggtgatattcaatttgatacccaggcatc	Protospacer
 ..  ***.*****************   .

105. spacer 1.11|972197|30|NZ_CP021104|PILER-CR,CRT matches to MK448692 (Streptococcus phage Javan173, complete genome) position: , mismatch: 10, identity: 0.667

cattacctttacctttcttgttgtataccg	CRISPR spacer
gattacctttacctttcttcttaagacttt	Protospacer
 ****************** **. .  ..

106. spacer 2.19|1477111|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027106 (Escherichia coli strain RM14721 plasmid pRM14721, complete sequence) position: , mismatch: 10, identity: 0.697

agggctttttcttttgcaaaatcgtagttaaag	CRISPR spacer
tattctttttattttgcaaaattgtagtacata	Protospacer
 .  ****** ***********.*****  * .

107. spacer 2.20|1477172|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to MH779524 (Lactococcus phage vB_Llc_bIBBD4, complete genome) position: , mismatch: 10, identity: 0.697

caggtaggcaacaattcaaccattacctttggg	CRISPR spacer
caagtaagcaacaattcaaccatttatcagacg	Protospacer
**.***.*****************  ..  . *

108. spacer 2.20|1477172|33|NZ_CP021104|CRISPRCasFinder,CRT,PILER-CR matches to MH779526 (Lactococcus phage vB_Llc_bIBBL81, complete genome) position: , mismatch: 10, identity: 0.697

caggtaggcaacaattcaaccattacctttggg	CRISPR spacer
caagtaagcaacaattcaaccatttatcagacg	Protospacer
**.***.*****************  ..  . *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8850 : 61011

Staphylococcus_phage(21.05%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042513824.1\|8850_10101_-\|transposase	transposase	A0A286QQE5	Streptococcus_phage	1.8e-57	36.3
WP_012390701.1\|10179_10632_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.8e-32	51.5
WP_003682303.1\|10888_11182_+	30S ribosomal protein S6	NA	NA	NA	NA
WP_035435868.1\|11222_11948_+	single-stranded DNA-binding protein	A0A2D1GPB7	Lactobacillus_phage	5.6e-35	66.4
WP_003682305.1\|11986_12223_+	30S ribosomal protein S18	NA	NA	NA	NA
WP_035435870.1\|12347_14381_+	DHH family phosphoesterase	NA	NA	NA	NA
WP_003685631.1\|14380_14833_+	50S ribosomal protein L9	NA	NA	NA	NA
WP_035435873.1\|14877_16281_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	3.5e-110	49.3
WP_021349470.1\|16364_17540_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	1.7e-44	28.7
WP_003682310.1\|17551_17884_+	hypothetical protein	NA	NA	NA	NA
WP_042513823.1\|18123_19410_-\|transposase	ISL3 family transposase	A0A2R2ZGN7	Clostridioides_phage	2.5e-09	20.6
WP_014562466.1\|19687_20686_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-50	38.4
WP_003685635.1\|21204_21912_+	response regulator transcription factor	W8CYM9	Bacillus_phage	7.9e-42	39.8
WP_014562047.1\|21923_23783_+	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	2.2e-35	35.6
WP_003682313.1\|23766_25065_+	hypothetical protein	NA	NA	NA	NA
WP_014562049.1\|25066_25867_+	two-component system regulatory protein YycI	NA	NA	NA	NA
WP_003682315.1\|25881_26697_+	MBL fold metallo-hydrolase	A0A0C5AJ83	Bacteriophage	4.1e-34	33.2
WP_003682316.1\|26771_28043_+	trypsin-like peptidase domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	5.8e-19	29.3
WP_021350198.1\|28550_29030_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_003685648.1\|29244_29670_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_014562051.1\|29675_30611_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_035436613.1\|30990_32334_+	SLC45 family MFS transporter	NA	NA	NA	NA
WP_035436615.1\|32346_34593_+	glycoside hydrolase family 65 protein	NA	NA	NA	NA
WP_003682323.1\|34739_35408_+	beta-phosphoglucomutase	NA	NA	NA	NA
WP_003682325.1\|35794_35983_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_035436617.1\|36136_37114_-	choloylglycine hydrolase family protein	M1H9I8	Acanthocystis_turfacea_Chlorella_virus	2.5e-14	25.4
WP_003682327.1\|37168_38104_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003682328.1\|38406_39399_-	D-2-hydroxyacid dehydrogenase	M1HMI7	Paramecium_bursaria_Chlorella_virus	4.8e-37	31.8
WP_035436619.1\|39414_40599_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_003682330.1\|40947_41178_+	hypothetical protein	NA	NA	NA	NA
WP_014562056.1\|41282_43376_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	5.1e-121	40.4
WP_012390672.1\|43676_45137_+	cardiolipin synthase	NA	NA	NA	NA
WP_024500595.1\|45619_49357_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
WP_035436629.1\|49363_53377_+	helicase-exonuclease AddAB subunit AddA	S5MMD7	Bacillus_phage	3.3e-12	22.4
WP_003685671.1\|53376_54240_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	5.6e-58	46.4
WP_035436630.1\|54477_56103_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_003682345.1\|56396_56753_-	arsenate reductase family protein	NA	NA	NA	NA
WP_035436631.1\|56790_57906_-	ABC transporter permease	NA	NA	NA	NA
WP_003682349.1\|57898_58630_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.4e-25	32.7
WP_086031729.1\|59211_60462_-\|transposase	transposase	A0A286QQE5	Streptococcus_phage	9.0e-57	37.0
WP_086031730.1\|60540_61011_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.9e-32	51.5

DBSCAN-SWA_2

90226 : 147621

unidentified_phage(18.18%)

transposase,holin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003682400.1\|90226_91525_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	6.2e-93	48.8
WP_035436589.1\|91887_92901_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_035436592.1\|93158_94412_-\|tRNA	tyrosine--tRNA ligase	A0A1L2CUL7	Pectobacterium_phage	3.9e-84	42.0
WP_014562075.1\|94879_96334_+	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_035436595.1\|96337_97081_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-33	42.4
WP_014562076.1\|97400_98774_+	amino acid permease	NA	NA	NA	NA
WP_014562466.1\|99278_100277_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-50	38.4
WP_107504371.1\|101712_101802_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_035437017.1\|102268_103618_+	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-123	50.6
WP_021349242.1\|105287_106487_+	nucleoside transporter	NA	NA	NA	NA
WP_003685735.1\|106720_107641_+	ribonucleoside hydrolase RihC	NA	NA	NA	NA
WP_021350222.1\|107829_108567_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_003685743.1\|108585_109521_+	nucleoid occlusion protein	I3NLC2	Bifidobacterium_phage	6.2e-10	33.6
WP_014562081.1\|109534_110368_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	1.0e-16	33.5
WP_003682416.1\|110380_110581_+	DUF951 domain-containing protein	NA	NA	NA	NA
WP_003682418.1\|110596_111694_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_015638460.1\|111727_112501_+	DUF1129 domain-containing protein	NA	NA	NA	NA
WP_003685751.1\|112771_113914_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	5.7e-58	32.4
WP_035437022.1\|115268_116039_+	exopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_035437024.1\|116055_116796_+	CpsD/CapB family tyrosine-protein kinase	NA	NA	NA	NA
WP_035437027.1\|116822_117593_+	exopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_035437030.1\|117623_118565_+	GDP-mannose 4,6-dehydratase	A0A1V0SAI6	Catovirus	5.0e-44	36.3
WP_035437032.1\|118542_119208_+	exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase	NA	NA	NA	NA
WP_035437035.1\|119244_120078_+	glycosyltransferase	NA	NA	NA	NA
WP_035437038.1\|120213_121152_+	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA
WP_051132372.1\|121195_121681_+	glycosyltransferase	A0A0F7L2F7	uncultured_marine_virus	4.0e-05	26.5
WP_035437042.1\|121720_122245_+	hypothetical protein	NA	NA	NA	NA
WP_035437044.1\|122249_123350_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_035437047.1\|123460_124999_+	polysaccharide biosynthesis C-terminal domain-containing protein	NA	NA	NA	NA
WP_035437052.1\|125010_126153_+	EpsG family protein	NA	NA	NA	NA
WP_014562705.1\|126326_127514_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_014562705.1\|127991_129179_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_086031733.1\|129625_129982_+	glycosyltransferase	NA	NA	NA	NA
WP_086031734.1\|130145_131078_+\|transposase	IS30 family transposase	H7BW61	unidentified_phage	8.5e-28	30.7
WP_080650604.1\|131073_131739_+	DUF1919 domain-containing protein	NA	NA	NA	NA
WP_086031735.1\|131928_133068_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.3e-42	33.1
WP_051132360.1\|134020_135106_+	glycosyltransferase	NA	NA	NA	NA
WP_086031736.1\|136684_136972_+\|transposase	transposase	NA	NA	NA	NA
WP_086031737.1\|136995_137901_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-39	35.3
WP_035436068.1\|138284_139166_-	glycosyl transferase family 14	NA	NA	NA	NA
WP_154244354.1\|139588_140350_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	4.1e-137	96.4
WP_002816285.1\|140403_140655_-\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	9.2e-38	96.4
WP_086031739.1\|140900_141896_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.1e-36	33.7
WP_086031740.1\|142080_143100_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.0e-42	35.1
WP_023487886.1\|143318_144506_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_111522973.1\|144679_144775_-	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_035437548.1\|144888_145395_-	cupin domain-containing protein	NA	NA	NA	NA
WP_035437552.1\|145591_146281_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.8e-35	36.6
WP_035437547.1\|146478_147621_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.2e-29	30.0

DBSCAN-SWA_3

152875 : 208818

Lactobacillus_phage(19.05%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086031742.1\|152875_154126_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	2.4e-57	37.4
WP_086031743.1\|154199_154682_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	1.1e-31	49.3
WP_021349514.1\|154715_155903_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-37	29.3
WP_086031744.1\|156081_156795_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	6.5e-28	35.2
WP_175402317.1\|156731_157667_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_035436931.1\|158013_159054_+	AI-2E family transporter	NA	NA	NA	NA
WP_048340284.1\|159141_160803_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_035436933.1\|161089_161575_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.4e-21	44.2
WP_035436936.1\|161558_162698_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_003686529.1\|162716_164012_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	8.2e-21	32.7
WP_035436938.1\|164351_165392_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_035436940.1\|165403_166954_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_003682490.1\|167612_168335_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SPE1	Cyanophage	3.3e-35	36.8
WP_012390750.1\|168337_168580_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003682494.1\|168580_169261_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_015638502.1\|169264_171490_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	6.3e-146	41.6
WP_003682498.1\|171465_172929_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.1e-61	34.7
WP_012390753.1\|172928_173966_+	phosphoribosylformylglycinamidine cyclo-ligase	M4QRQ6	Synechococcus_phage	9.4e-60	39.8
WP_035436943.1\|173974_174556_+	phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_035436945.1\|174557_176093_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	7.6e-74	46.2
WP_086031745.1\|176366_177620_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_003682507.1\|177859_178555_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_021349275.1\|178679_179858_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_035436953.1\|179971_180976_+	hypothetical protein	NA	NA	NA	NA
WP_021349273.1\|181466_181838_+	cupredoxin domain-containing protein	NA	NA	NA	NA
WP_003686555.1\|181851_182160_+	cupredoxin domain-containing protein	NA	NA	NA	NA
WP_003682512.1\|182159_184091_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.7e-92	37.6
WP_024271753.1\|184202_184637_+	hypothetical protein	NA	NA	NA	NA
WP_003682515.1\|184684_185161_-	nucleoside 2-deoxyribosyltransferase	A0A2P0ZL88	Lactobacillus_phage	7.7e-17	35.2
WP_048340466.1\|191008_192148_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.0e-43	33.6
WP_048340467.1\|192194_192809_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	8.1e-19	32.5
WP_080964966.1\|192745_193654_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	4.9e-12	30.2
WP_080965009.1\|194096_195971_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003684235.1\|196117_197104_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_042513971.1\|197428_198454_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.3e-42	35.1
WP_080650597.1\|199725_200361_-	DUF4767 domain-containing protein	NA	NA	NA	NA
WP_021350357.1\|200486_200876_+	tautomerase family protein	NA	NA	NA	NA
WP_035435880.1\|200978_201524_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_015638518.1\|201608_202265_+	nitroreductase	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	9.3e-13	25.5
WP_003684232.1\|202962_203943_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_015638522.1\|204911_205106_+	CsbD family protein	NA	NA	NA	NA
WP_086031746.1\|205672_206128_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	1.6e-32	50.0
WP_014562705.1\|207331_208519_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_086031747.1\|208590_208818_+\|transposase	transposase	A0A0P0ICY9	Lactobacillus_phage	5.8e-15	57.6

DBSCAN-SWA_4

258184 : 310847

Tupanvirus(12.5%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003686432.1\|258184_260185_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	5.4e-88	36.2
WP_003683977.1\|260188_260977_+	TatD family hydrolase	NA	NA	NA	NA
WP_012390795.1\|260963_261533_+	ribonuclease M5	NA	NA	NA	NA
WP_021349691.1\|261525_262413_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_003683980.1\|262692_263544_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_024271880.1\|263721_264627_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_031274189.1\|264629_265295_+	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	2.6e-15	27.6
WP_035437682.1\|265294_266089_+	metal ABC transporter permease	NA	NA	NA	NA
WP_021349689.1\|266313_267150_+	pur operon repressor	NA	NA	NA	NA
WP_012390797.1\|267165_268533_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7P8	Chrysochromulina_ericina_virus	3.4e-33	34.4
WP_003683994.1\|268608_269595_+	ribose-phosphate diphosphokinase	A0A1V0SHF7	Hokovirus	8.4e-42	33.6
WP_003683996.1\|269704_270433_+	hypothetical protein	NA	NA	NA	NA
WP_035437683.1\|270609_271431_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_021349686.1\|271442_272798_-	HD domain-containing protein	A0A291ATA1	Pandoravirus	1.4e-26	32.1
WP_003686451.1\|272912_273338_+	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_003684002.1\|273383_273971_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_003684004.1\|274137_275739_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.0e-145	50.3
WP_003684007.1\|275949_277218_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_003684008.1\|277312_277558_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_021349684.1\|278289_278994_+	class A sortase	NA	NA	NA	NA
WP_003684311.1\|279113_279566_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	4.7e-32	51.5
WP_003684310.1\|279644_280895_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	2.6e-56	37.0
WP_021349723.1\|281080_281545_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_003684020.1\|281681_282239_+	LemA family protein	NA	NA	NA	NA
WP_003686466.1\|282249_283149_+\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_021349724.1\|283323_284703_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_012390801.1\|284873_286352_+	DEAD/DEAH box helicase	A0A1V0SBR7	Catovirus	9.6e-66	37.8
WP_003684028.1\|286355_286715_+	holo-ACP synthase	NA	NA	NA	NA
WP_021349725.1\|286717_287839_+	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	3.2e-29	28.9
WP_015638559.1\|287850_288204_+	type II toxin-antitoxin system PemK/MazF family toxin	A0A2K9VCH5	Lactobacillus_phage	2.3e-10	38.5
WP_003686479.1\|288336_288972_-	CBS domain-containing protein	NA	NA	NA	NA
WP_003684038.1\|289159_289720_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_021349726.1\|289737_293280_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_012390804.1\|293276_293549_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_003686487.1\|293637_293994_+	septum formation initiator family protein	NA	NA	NA	NA
WP_003684046.1\|294122_294629_+	RNA-binding protein S1	NA	NA	NA	NA
WP_024500679.1\|294628_295978_+\|tRNA	tRNA lysidine(34) synthetase TilS	A0A0N7G7K4	Chrysochromulina_ericina_virus	4.0e-10	24.4
WP_003684053.1\|295994_296543_+	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	8.0e-10	31.1
WP_035437099.1\|296626_298795_+\|protease	ATP-dependent zinc metalloprotease FtsH	A0A0P0CCN8	Ostreococcus_mediterraneus_virus	7.4e-107	48.9
WP_012390806.1\|298871_299753_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_021349728.1\|299841_300843_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_021349729.1\|300858_302352_+\|tRNA	lysine--tRNA ligase	A0A2K9L3L6	Tupanvirus	2.8e-89	41.4
WP_042513854.1\|308475_309762_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_107504382.1\|310466_310847_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	2.1e-41	60.3

DBSCAN-SWA_5

415656 : 528187

Streptococcus_phage(32.35%)

transposase,holin,tRNA,protease,integrase

attL 465558:465573|attR 494531:494544

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042513837.1\|415656_416589_-\|transposase	IS30 family transposase	H7BW61	unidentified_phage	5.5e-27	30.4
WP_035437299.1\|416910_417549_-	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	7.8e-41	42.5
WP_021349636.1\|417612_418929_+	DNA/RNA helicase	A0A1X9I5S6	Streptococcus_phage	7.2e-81	42.9
WP_031284433.1\|418925_419600_+	ComF family protein	NA	NA	NA	NA
WP_003682582.1\|419735_420281_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_003682585.1\|420451_422821_+	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_178958862.1\|422880_423996_+	peptide chain release factor 2	NA	NA	NA	NA
WP_051132381.1\|424052_424382_+	PspC domain-containing protein	NA	NA	NA	NA
WP_003682589.1\|424381_424735_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_003682590.1\|424749_425712_+	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_021349634.1\|425704_426550_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_003682592.1\|426546_427560_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_021349633.1\|427622_428534_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	3.9e-70	46.1
WP_012390859.1\|429057_429837_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA
WP_021349632.1\|429852_431031_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003682596.1\|431055_432030_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_086031752.1\|432654_433905_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.2e-56	36.8
WP_004563287.1\|434129_434546_+	cupin domain-containing protein	NA	NA	NA	NA
WP_042514036.1\|434606_435143_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_042514037.1\|435139_436027_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	2.6e-34	42.9
WP_003682598.1\|436195_437137_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	5.3e-78	48.4
WP_003682600.1\|437149_437968_+	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_035436478.1\|437988_438915_+	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	1.4e-99	57.7
WP_004563284.1\|439104_440133_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
WP_014562182.1\|440158_441100_-	L-lactate dehydrogenase	NA	NA	NA	NA
WP_035436481.1\|441202_442003_+	HAD-IIB family hydrolase	NA	NA	NA	NA
WP_154244359.1\|442065_442227_+	hypothetical protein	NA	NA	NA	NA
WP_014562183.1\|442289_444014_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.5e-195	60.1
WP_024500722.1\|444228_444864_+	HD domain-containing protein	NA	NA	NA	NA
WP_021350021.1\|444869_445100_+	hypothetical protein	NA	NA	NA	NA
WP_004563280.1\|445199_447215_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA
WP_023465865.1\|447224_450086_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	6.8e-302	54.8
WP_004563278.1\|450175_451261_+	hypothetical protein	NA	NA	NA	NA
WP_003682618.1\|451479_452349_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	3.7e-09	30.8
WP_003682620.1\|452370_453348_+	YvcK family protein	A1IMD5	Streptococcus_phage	2.7e-93	54.0
WP_015638637.1\|453365_454304_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	2.3e-49	36.8
WP_003682627.1\|455103_455694_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	3.6e-56	56.8
WP_021350007.1\|457902_458502_+	DUF1819 family protein	NA	NA	NA	NA
WP_015638639.1\|458501_459083_+	DUF1788 domain-containing protein	NA	NA	NA	NA
WP_021350006.1\|459094_462787_+	BREX system P-loop protein BrxC	NA	NA	NA	NA
460476:460489	attL	NA	NA	NA	NA
WP_086031753.1\|462839_466484_+	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA
465558:465573	attL	NA	NA	NA	NA
WP_021350004.1\|466540_467620_-\|integrase	site-specific integrase	Q9AZR0	Lactococcus_phage	6.3e-67	40.6
WP_157660919.1\|467621_469907_-	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA
467768:467783	attR	NA	NA	NA	NA
WP_021350321.1\|469927_472462_+	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA
467768:467783	attR	NA	NA	NA	NA
WP_180959856.1\|472508_474581_+\|protease	protease Lon-related BREX system protein BrxL	NA	NA	NA	NA
WP_021350323.1\|474609_476397_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_048340475.1\|476420_476714_+	hypothetical protein	NA	NA	NA	NA
WP_003645712.1\|476787_477324_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_042513842.1\|477320_478208_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.7e-33	42.3
WP_080965012.1\|478225_478789_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q8W6R2	Burkholderia_virus	1.4e-09	33.1
WP_012390875.1\|479614_480628_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_003682636.1\|480709_481915_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_003682638.1\|482020_482788_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_012390876.1\|482904_484227_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	2.0e-171	70.3
WP_003682642.1\|484420_485815_+	amino acid permease	NA	NA	NA	NA
WP_014562187.1\|485903_487454_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA
WP_004563267.1\|487516_487756_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_014562188.1\|487808_490202_+	ribonuclease R	Q0GXV6	Lactococcus_phage	6.5e-88	39.1
WP_003682651.1\|490222_490696_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-42	56.8
WP_024272014.1\|490723_491305_-	hypothetical protein	NA	NA	NA	NA
WP_021350151.1\|491445_492135_+	uracil-DNA glycosylase	A0A0B5IW78	Pandoravirus	8.7e-46	45.1
WP_003682658.1\|492168_493143_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_003682659.1\|493151_493604_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_021350149.1\|493603_494119_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004563262.1\|494248_494788_-	exonuclease	M1PFD8	Streptococcus_phage	2.0e-21	35.6
WP_003682662.1\|494915_495812_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_014562189.1\|495823_496669_+	TIGR00159 family protein	NA	NA	NA	NA
WP_014562190.1\|496658_497537_+	hypothetical protein	NA	NA	NA	NA
WP_014562191.1\|497576_498935_+	phosphoglucosamine mutase	A0A127AWJ1	Bacillus_phage	3.6e-19	26.9
WP_003682666.1\|499148_500969_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1HVL7	Paramecium_bursaria_Chlorella_virus	2.0e-89	35.5
WP_003682667.1\|501248_501560_+	hypothetical protein	NA	NA	NA	NA
WP_035436517.1\|501569_503420_+	acetyltransferase	A0A1R3Y5Q6	Salmonella_virus	2.7e-25	27.7
WP_031273992.1\|503450_504269_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_021350141.1\|504589_505204_+	LysM peptidoglycan-binding domain-containing protein	A0A249XZV3	Enterococcus_phage	1.2e-22	48.5
WP_003682672.1\|505600_506629_-	putative sulfate exporter family transporter	NA	NA	NA	NA
WP_012390889.1\|506749_507655_+	LysR family transcriptional regulator	A0A2H4J8I9	uncultured_Caudovirales_phage	7.5e-05	41.2
WP_024500730.1\|507751_508714_-	mannose-6-phosphate isomerase, class I	NA	NA	NA	NA
WP_003682677.1\|508800_509640_-	DegV family protein	A0A1X9I5J4	Streptococcus_phage	2.7e-49	40.5
WP_003682679.1\|509802_510318_+	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_003682680.1\|510551_511493_-	Dyp-type peroxidase	NA	NA	NA	NA
WP_014562195.1\|511967_512951_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
WP_014562196.1\|512970_513774_+	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA
WP_003682688.1\|513802_514723_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_035436511.1\|514723_515074_+	DUF956 family protein	NA	NA	NA	NA
WP_014562199.1\|515690_516413_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.3e-36	37.8
WP_003682693.1\|516412_517915_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	5.2e-35	34.6
WP_003682694.1\|518117_518978_+	sugar transporter	NA	NA	NA	NA
WP_048340476.1\|519052_519589_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_042513980.1\|519585_520473_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	9.9e-34	42.3
WP_042514038.1\|520584_521040_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.4e-31	49.3
WP_048340477.1\|521113_522364_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.8e-57	37.0
WP_003685822.1\|522887_523451_+	peroxiredoxin	NA	NA	NA	NA
WP_014562202.1\|523466_525131_+	FAD-dependent oxidoreductase	A0A2I2L5E1	Orpheovirus	8.6e-47	37.8
WP_042513939.1\|525268_526621_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_003682700.1\|526627_526825_+	hypothetical protein	NA	NA	NA	NA
WP_003682701.1\|526985_527468_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003682702.1\|527485_528187_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_6

572336 : 595630

Streptococcus_phage(33.33%)

tRNA,transposase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021350213.1\|572336_572657_+\|head	head protein	Q6SED4	Lactobacillus_prophage	1.2e-26	54.2
WP_021350214.1\|572769_572937_+	hypothetical protein	NA	NA	NA	NA
WP_035437514.1\|572924_573530_-	30S ribosomal protein S4	NA	NA	NA	NA
WP_012390958.1\|573859_575569_+	septation ring formation regulator EzrA	NA	NA	NA	NA
WP_003685978.1\|575749_576898_+	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	2.0e-31	30.3
WP_003682780.1\|576910_578131_+\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_035437512.1\|578526_579816_+	GntP family permease	NA	NA	NA	NA
WP_003682784.1\|579828_580971_+	glycerate kinase	W6LM47	Streptococcus_phage	2.2e-38	37.1
WP_086031754.1\|581800_583087_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_042513950.1\|583677_585036_-\|transposase	transposase	NA	NA	NA	NA
WP_086031756.1\|586570_587026_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	1.2e-32	50.7
WP_012391038.1\|587099_588350_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.4e-57	37.3
WP_035437599.1\|588998_589610_+	hypothetical protein	NA	NA	NA	NA
WP_035437598.1\|589761_590256_+	thiol peroxidase	NA	NA	NA	NA
WP_012390965.1\|590561_593216_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	1.3e-158	42.4
WP_048340479.1\|593324_594683_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_021353998.1\|594652_595630_-\|transposase	IS30 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

717984 : 775984

Lactobacillus_phage(16.67%)

transposase,protease,integrase

attL 757837:757853|attR 764142:764158

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003684331.1\|717984_719148_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.8e-160	71.7
WP_015638746.1\|719749_721549_+	ribonuclease J	NA	NA	NA	NA
WP_021349941.1\|721639_722536_+	hypothetical protein	NA	NA	NA	NA
WP_021349940.1\|722716_723907_+	elongation factor Tu	A0A1V0SGC3	Hokovirus	1.1e-32	28.0
WP_003682058.1\|724077_725385_+	trigger factor	NA	NA	NA	NA
WP_003682055.1\|725535_726786_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.7e-135	57.1
WP_003682053.1\|726799_727393_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_003682052.1\|727392_727692_+	nucleoside triphosphate pyrophosphohydrolase family protein	A0A1S7FYY8	Listeria_phage	6.9e-24	51.5
WP_003682050.1\|727958_728105_-	hypothetical protein	NA	NA	NA	NA
WP_171029992.1\|728307_729039_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	3.9e-28	36.7
WP_003682047.1\|729316_731128_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_035436721.1\|731192_732500_+	GTPase ObgE	NA	NA	NA	NA
WP_003682045.1\|732526_733459_+	ribonuclease Z	NA	NA	NA	NA
WP_171029993.1\|733485_734319_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_021349938.1\|734391_736689_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.2e-70	29.3
WP_021349937.1\|736702_737230_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.3e-30	44.0
WP_003682041.1\|737561_737939_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_003682040.1\|738018_739017_-	D-2-hydroxyacid dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	7.7e-51	36.3
WP_021349936.1\|739518_740328_+	2-keto-4-pentenoate hydratase	NA	NA	NA	NA
WP_003682034.1\|741032_741569_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_003682030.1\|741860_742190_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_003682029.1\|742537_742846_-	membrane protein	NA	NA	NA	NA
WP_035433292.1\|743546_743894_-	helix-turn-helix transcriptional regulator	E9LUL4	Lactobacillus_phage	1.0e-10	42.9
WP_021349932.1\|744045_745137_-	glycerol dehydrogenase	NA	NA	NA	NA
WP_015638760.1\|745395_745575_+	hypothetical protein	NA	NA	NA	NA
WP_021349931.1\|745936_746797_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_003682017.1\|746796_747357_+	acetyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	5.9e-08	50.0
WP_015638766.1\|747716_748082_+	hypothetical protein	NA	NA	NA	NA
WP_021349929.1\|748352_748721_+	hypothetical protein	NA	NA	NA	NA
WP_035436724.1\|748847_749957_-	MFS transporter	NA	NA	NA	NA
WP_014562705.1\|751461_752649_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_021349926.1\|753521_755111_-	asparagine synthase B	L7RC73	Acanthamoeba_polyphaga_moumouvirus	5.2e-102	40.3
WP_003682005.1\|756099_756540_-	hypothetical protein	NA	NA	NA	NA
WP_035437289.1\|756550_757540_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003682001.1\|757561_758008_-	nucleoside 2-deoxyribosyltransferase	A0A1D3SPR3	Enterococcus_phage	2.4e-20	36.7
757837:757853	attL	NA	NA	NA	NA
WP_035437285.1\|758108_758729_+	hypothetical protein	NA	NA	NA	NA
WP_021349922.1\|759756_760887_-\|integrase	site-specific integrase	A0A0M9JJ77	Lactobacillus_phage	1.7e-91	47.3
WP_157660920.1\|760896_761280_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_021349920.1\|761376_761772_-	helix-turn-helix domain-containing protein	Q9G039	Staphylococcus_virus	1.6e-12	55.1
WP_021349919.1\|761919_762162_+	DUF739 family protein	NA	NA	NA	NA
WP_021349918.1\|762219_762543_+	DUF771 domain-containing protein	NA	NA	NA	NA
WP_021349917.1\|762667_762817_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_053069258.1\|763170_764265_+	helix-turn-helix domain-containing protein	X2CYF1	Lactobacillus_phage	2.6e-15	29.2
764142:764158	attR	NA	NA	NA	NA
WP_035437281.1\|764269_764488_+	hypothetical protein	NA	NA	NA	NA
WP_021349883.1\|764594_764975_+	hypothetical protein	NA	NA	NA	NA
WP_021349882.1\|764987_765245_+	hypothetical protein	NA	NA	NA	NA
WP_021349880.1\|765522_766797_+	hypothetical protein	NA	NA	NA	NA
WP_021349879.1\|766797_767235_+	hypothetical protein	NA	NA	NA	NA
WP_021349877.1\|767382_767604_+	hypothetical protein	NA	NA	NA	NA
WP_021349876.1\|767630_768050_+	hypothetical protein	NA	NA	NA	NA
WP_021349875.1\|768062_768560_+	thioredoxin family protein	NA	NA	NA	NA
WP_042513910.1\|768667_769888_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.8e-95	46.5
WP_021349874.1\|770158_770929_+	hypothetical protein	NA	NA	NA	NA
WP_021349873.1\|771037_771301_+	hypothetical protein	NA	NA	NA	NA
WP_035435892.1\|772210_772501_+	hypothetical protein	NA	NA	NA	NA
WP_021349870.1\|772516_772825_+	hypothetical protein	NA	NA	NA	NA
WP_021349869.1\|773715_774222_+	hypothetical protein	NA	NA	NA	NA
WP_021349868.1\|774244_774667_+	hypothetical protein	NA	NA	NA	NA
WP_086031759.1\|774763_775984_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	5.6e-96	46.7

DBSCAN-SWA_8

779703 : 895232

114

Lactobacillus_phage(21.28%)

transposase,terminase,holin,tRNA,protease,integrase

attL 794197:794256|attR 844293:844364

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086031761.1\|779703_780924_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	8.1e-95	46.2
WP_035435959.1\|784038_784947_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	2.3e-22	29.8
WP_080650600.1\|785008_786175_+	ABC transporter permease	NA	NA	NA	NA
WP_012391429.1\|787193_788414_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.1e-95	46.5
WP_035436083.1\|788537_789104_+	hypothetical protein	NA	NA	NA	NA
WP_086031764.1\|789544_790159_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.6e-27	38.0
WP_154244364.1\|790095_791001_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_041812692.1\|791656_792535_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	5.2e-43	36.8
WP_086031766.1\|792558_792846_-\|transposase	transposase	NA	NA	NA	NA
WP_086031761.1\|792932_794153_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	8.1e-95	46.2
794197:794256	attL	NA	NA	NA	NA
WP_035437662.1\|795281_795632_+	hypothetical protein	NA	NA	NA	NA
WP_035437660.1\|795631_795931_+	hypothetical protein	NA	NA	NA	NA
WP_035437658.1\|796103_796460_-	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_003586674.1\|796459_796738_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_012391086.1\|796872_797562_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	2.5e-61	52.2
WP_051132389.1\|797658_797994_+	hypothetical protein	NA	NA	NA	NA
WP_086031759.1\|799181_800402_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	5.6e-96	46.7
WP_086031768.1\|800505_801429_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	6.2e-31	32.7
WP_086031769.1\|801522_802662_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.0e-43	33.3
WP_003577309.1\|802932_804771_+	cadmium-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.2e-41	27.3
WP_016511950.1\|804814_805027_+	tyrosine recombinase	A0A1S5SEW4	Streptococcus_phage	5.4e-07	45.6
WP_085776374.1\|805044_805974_-\|transposase	IS30 family transposase	H7BW61	unidentified_phage	1.0e-20	30.6
WP_050755181.1\|806169_806790_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	7.4e-28	37.9
WP_107760586.1\|806777_807662_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_016511784.1\|807957_809331_-	MFS transporter	NA	NA	NA	NA
WP_016511783.1\|809370_810900_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_003576326.1\|811026_811218_+	hypothetical protein	NA	NA	NA	NA
WP_085776373.1\|811296_812226_-\|transposase	IS30 family transposase	H7BW61	unidentified_phage	5.0e-20	30.6
WP_016511790.1\|812354_813719_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_033609856.1\|813850_814225_-	hypothetical protein	NA	NA	NA	NA
WP_080487858.1\|814218_815006_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_016511417.1\|815195_815300_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_050755181.1\|816168_816789_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	7.4e-28	37.9
WP_107760586.1\|816776_817661_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_154244365.1\|817692_818124_+	hypothetical protein	NA	NA	NA	NA
WP_086031770.1\|818231_818816_+	recombinase family protein	A0A1V0E035	Clostridioides_phage	9.1e-20	33.3
WP_035437723.1\|818864_819728_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.5e-26	35.7
WP_035437721.1\|819729_820590_+	ABC transporter permease	NA	NA	NA	NA
WP_086031771.1\|820965_821889_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	1.6e-31	31.6
WP_014562285.1\|822281_823367_-\|integrase	site-specific integrase	A0A0M9JJ77	Lactobacillus_phage	2.4e-106	53.8
WP_035435907.1\|823473_824001_-	hypothetical protein	E9LUL0	Lactobacillus_phage	2.0e-58	71.4
WP_035435905.1\|824243_825005_-	DUF4393 domain-containing protein	E9LUL1	Lactobacillus_phage	8.3e-130	94.1
WP_051132355.1\|825201_825756_-	hypothetical protein	NA	NA	NA	NA
WP_035435902.1\|825805_826231_-	ImmA/IrrE family metallo-endopeptidase	D6PSS8	Lactobacillus_phage	2.4e-17	36.4
WP_187343257.1\|826416_826662_-	hypothetical protein	A0A0N9RUA4	Staphylococcus_phage	1.4e-09	47.7
WP_042513835.1\|826662_828021_-\|transposase	transposase	NA	NA	NA	NA
WP_080650595.1\|828149_828956_-	DUF3644 domain-containing protein	A0A0N9RUA4	Staphylococcus_phage	1.0e-85	59.1
WP_035435767.1\|828973_829294_-	helix-turn-helix transcriptional regulator	A0A1B0Y2R0	Lactobacillus_phage	5.1e-25	56.0
WP_021815904.1\|829474_829705_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014562286.1\|829701_830487_+	Rha family transcriptional regulator	E9LUL6	Lactobacillus_phage	8.0e-96	66.5
WP_138464386.1\|830590_830797_-	hypothetical protein	NA	NA	NA	NA
WP_154244367.1\|830864_831026_+	hypothetical protein	NA	NA	NA	NA
WP_035435765.1\|831136_831457_-	hypothetical protein	NA	NA	NA	NA
WP_051132354.1\|831521_831842_+	hypothetical protein	NA	NA	NA	NA
WP_171029991.1\|831985_832150_+	hypothetical protein	E9LUM1	Lactobacillus_phage	4.6e-14	89.8
WP_035435762.1\|832325_832892_-	hypothetical protein	NA	NA	NA	NA
WP_035435757.1\|834144_834996_+	PD-(D/E)XK nuclease-like domain-containing protein	E9LUM4	Lactobacillus_phage	5.2e-141	81.3
WP_035435754.1\|834995_835517_+	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	2.3e-30	54.3
WP_049775679.1\|835530_836223_+	helix-turn-helix domain-containing protein	Q8SDH3	Lactococcus_phage	4.3e-16	41.9
WP_035435751.1\|836293_836746_+	hypothetical protein	NA	NA	NA	NA
WP_035435748.1\|836860_837325_+	hypothetical protein	A0A0A1EL23	Lactobacillus_phage	7.2e-44	59.7
WP_086031772.1\|837670_838603_+\|transposase	IS30 family transposase	H7BW61	unidentified_phage	1.1e-27	30.7
WP_023465590.1\|838654_838858_+	hypothetical protein	NA	NA	NA	NA
WP_035436107.1\|838841_839348_+	DUF2335 domain-containing protein	NA	NA	NA	NA
WP_021349255.1\|840501_840708_-	CsbD family protein	NA	NA	NA	NA
WP_021349253.1\|841294_841684_+	hypothetical protein	NA	NA	NA	NA
WP_035435989.1\|841738_842221_+	hypothetical protein	NA	NA	NA	NA
WP_035426089.1\|842250_842682_+\|terminase	terminase small subunit	A0A0A1ENP4	Lactobacillus_phage	8.7e-36	57.2
WP_021349740.1\|842668_842830_+	hypothetical protein	NA	NA	NA	NA
WP_048340500.1\|843091_843970_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.5e-42	36.4
WP_003688751.1\|843993_844281_-\|transposase	transposase	NA	NA	NA	NA
WP_145998185.1\|844501_844885_+	hypothetical protein	NA	NA	NA	NA
844293:844364	attR	NA	NA	NA	NA
WP_042513837.1\|844990_845923_+\|transposase	IS30 family transposase	H7BW61	unidentified_phage	5.5e-27	30.4
WP_021349246.1\|845987_846662_+	hypothetical protein	A0A1B1IUG5	uncultured_Mediterranean_phage	6.6e-22	31.1
WP_035435948.1\|847093_848473_+	MFS transporter	NA	NA	NA	NA
WP_021349248.1\|848469_849393_+	ferrochelatase	NA	NA	NA	NA
WP_021353718.1\|849619_850618_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	3.8e-50	38.1
WP_048340502.1\|850708_851995_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_014562466.1\|852150_853149_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-50	38.4
WP_086031773.1\|854614_855802_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_010625596.1\|856468_856957_+	PAS domain-containing protein	NA	NA	NA	NA
WP_086031761.1\|857291_858512_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	8.1e-95	46.2
WP_021349110.1\|859716_860451_-	lactate utilization protein C	NA	NA	NA	NA
WP_015638801.1\|860443_861961_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_003685238.1\|861961_862768_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_021349108.1\|863020_864190_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
WP_003685235.1\|864659_865286_-	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	6.6e-16	52.9
WP_012391088.1\|865441_865693_+	DUF896 domain-containing protein	NA	NA	NA	NA
WP_003685231.1\|865769_865997_+	YneF family protein	NA	NA	NA	NA
WP_003685229.1\|866064_866697_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_035436535.1\|866792_867545_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_003681959.1\|867537_867828_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_003681957.1\|867981_868761_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_003681955.1\|868851_869730_+	elongation factor Ts	NA	NA	NA	NA
WP_003681954.1\|869810_870536_+	UMP kinase	NA	NA	NA	NA
WP_003681953.1\|870535_871096_+	ribosome recycling factor	NA	NA	NA	NA
WP_024271689.1\|871228_871996_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	1.1e-17	34.6
WP_003681950.1\|872012_872801_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_035436539.1\|872822_874094_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_015638806.1\|874127_875849_+\|tRNA	proline--tRNA ligase	A0A2K9L6B6	Tupanvirus	1.8e-07	25.9
WP_024500831.1\|875988_880332_+	PolC-type DNA polymerase III	A0A0K2SUJ2	Clostridium_phage	1.7e-14	35.3
WP_014562308.1\|880454_881606_-	acetylornithine transaminase	A0A1V0SKB7	Klosneuvirus	1.5e-21	27.0
WP_035436544.1\|881618_882365_-	acetylglutamate kinase	NA	NA	NA	NA
WP_003685208.1\|882374_883577_-	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA
WP_003685206.1\|883603_884629_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_035436547.1\|884873_885944_+	carbamoyl phosphate synthase small subunit	NA	NA	NA	NA
WP_021349106.1\|885936_889026_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_003681934.1\|889178_889658_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_003685200.1\|889677_890904_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_021349105.1\|890940_891243_+	YlxR family protein	NA	NA	NA	NA
WP_003681928.1\|891235_891559_+	YlxQ-related RNA-binding protein	NA	NA	NA	NA
WP_021349104.1\|891563_893891_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	4.3e-20	24.6
WP_003685195.1\|893903_894266_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_021349103.1\|894335_895232_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA

DBSCAN-SWA_9

898464 : 954127

Streptococcus_phage(21.74%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080964987.1\|898464_899373_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.2e-11	29.6
WP_042513934.1\|899525_899981_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	1.8e-31	49.3
WP_014562705.1\|900450_901638_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_048340463.1\|901769_902648_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-42	36.8
WP_003688751.1\|902671_902959_-\|transposase	transposase	NA	NA	NA	NA
WP_021350231.1\|904455_905793_-	SLC45 family MFS transporter	NA	NA	NA	NA
WP_021350232.1\|905801_907496_-	alpha-glucosidase	NA	NA	NA	NA
WP_021350233.1\|907653_908640_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_035437390.1\|908795_910088_+	Y-family DNA polymerase	M1Q231	Streptococcus_phage	3.5e-80	38.5
WP_021350236.1\|910068_910386_+	hypothetical protein	NA	NA	NA	NA
WP_014562320.1\|910538_911711_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_024271704.1\|913375_914338_+	ketopantoate reductase family protein	NA	NA	NA	NA
WP_021349142.1\|914728_915049_-	hypothetical protein	NA	NA	NA	NA
WP_003685171.1\|916696_917050_-	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_021349145.1\|917062_917644_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_080964989.1\|917744_918458_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	5.0e-28	35.7
WP_041812698.1\|918936_919224_+\|transposase	transposase	NA	NA	NA	NA
WP_048340505.1\|919247_920126_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	5.2e-43	36.8
WP_086031844.1\|920182_920302_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_035436004.1\|920364_922632_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.1e-124	30.7
WP_086031774.1\|922686_923619_-\|transposase	IS30 family transposase	H7BW61	unidentified_phage	1.9e-27	30.7
WP_021353998.1\|923734_924712_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_003681906.1\|925564_925930_-	hypothetical protein	NA	NA	NA	NA
WP_003681905.1\|926055_927102_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_003681903.1\|927112_927700_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_014562323.1\|927737_929594_+	molecular chaperone DnaK	A0A2P1EIW2	Megavirus	9.3e-135	45.4
WP_003681899.1\|929705_930866_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	4.8e-20	27.0
WP_021349426.1\|932604_932922_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA
WP_003681874.1\|932923_933244_+	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA
WP_021349425.1\|933256_934342_+	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	2.9e-11	23.5
WP_003685127.1\|934409_936242_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	2.5e-23	26.1
WP_003681865.1\|936754_937258_-	hypothetical protein	NA	NA	NA	NA
WP_021349422.1\|937293_937917_-	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	8.5e-08	31.3
WP_162485011.1\|938008_939031_+	aldo/keto reductase	NA	NA	NA	NA
WP_015638841.1\|939290_940364_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	5.3e-90	48.2
WP_021349420.1\|940375_941551_+	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.1e-88	41.2
WP_003681857.1\|941690_943442_+	hypothetical protein	NA	NA	NA	NA
WP_021349418.1\|943479_943935_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_021349417.1\|944095_944566_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	6.8e-26	42.9
WP_021349416.1\|944558_945752_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	6.5e-97	48.4
WP_003681853.1\|945738_946347_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	4.7e-27	39.1
WP_021349415.1\|946346_947405_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.3e-40	33.5
WP_021349414.1\|947814_948300_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_035436973.1\|948360_949395_-	HAMP domain-containing histidine kinase	A0A1B0VMK3	Pseudomonas_phage	7.0e-07	26.0
WP_021349411.1\|949387_949939_-	response regulator transcription factor	NA	NA	NA	NA
WP_024500857.1\|950882_952055_+	cysteine desulfurase	NA	NA	NA	NA
WP_041812577.1\|952345_952798_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.1e-32	51.5
WP_048340507.1\|952876_954127_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	7.6e-56	36.8

DBSCAN-SWA_10

1007752 : 1127675

113

Streptococcus_phage(12.5%)

transposase,tRNA,integrase

attL 1049692:1049707|attR 1098882:1098897

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003681741.1\|1007752_1009048_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_035436372.1\|1009051_1010827_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_021349548.1\|1011368_1012052_+	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_003684990.1\|1012165_1012354_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_003684989.1\|1012418_1012868_+	GatB/YqeY domain-containing protein	A0A0K2FLI9	Brevibacillus_phage	7.0e-12	34.3
WP_014562357.1\|1013015_1013999_+	PhoH family protein	L7TP00	Rhizobium_phage	9.2e-49	49.3
WP_003681726.1\|1013998_1014472_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_035436369.1\|1014449_1014848_+	diacylglycerol kinase family protein	NA	NA	NA	NA
WP_003681722.1\|1014861_1015767_+	GTPase Era	NA	NA	NA	NA
WP_003681720.1\|1015879_1016698_+	DNA repair protein RecO	NA	NA	NA	NA
WP_003681718.1\|1016965_1017940_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_021349547.1\|1017939_1020018_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_021349546.1\|1020169_1022065_+	DNA primase	A0A1S5RFD7	Helicobacter_phage	3.3e-42	32.1
WP_003681711.1\|1022064_1023207_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.9e-37	36.6
WP_042513964.1\|1023667_1024510_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	9.7e-156	98.6
WP_012391066.1\|1024563_1024815_-\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	4.6e-37	95.2
WP_021349446.1\|1025110_1025671_+	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
WP_003681705.1\|1025682_1025868_+	DUF2273 domain-containing protein	NA	NA	NA	NA
WP_003681703.1\|1025895_1026438_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_003681701.1\|1026452_1026704_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_003681696.1\|1026715_1026856_+	hypothetical protein	NA	NA	NA	NA
WP_042513968.1\|1027073_1027757_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.6e-31	38.2
WP_014562363.1\|1027950_1029237_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_003683258.1\|1029469_1030381_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_035437742.1\|1030583_1031591_-	diaminopimelate epimerase	NA	NA	NA	NA
WP_003683256.1\|1031603_1032962_-	aspartate kinase	NA	NA	NA	NA
WP_003683241.1\|1033433_1034753_+	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_003683238.1\|1034777_1035491_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA
WP_015638911.1\|1035490_1036645_+	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA
WP_003683233.1\|1036647_1037583_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_021350307.1\|1037575_1038355_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_021350308.1\|1038379_1039564_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_003683228.1\|1039578_1040631_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_003683224.1\|1040766_1042107_+	ATPase	NA	NA	NA	NA
WP_003683222.1\|1042099_1042774_+	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_035437740.1\|1042782_1043484_+\|tRNA	tRNA (adenine(22)-N(1))-methyltransferase TrmK	NA	NA	NA	NA
WP_035437738.1\|1043476_1044298_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_035437736.1\|1044317_1045559_+	peptidase T	NA	NA	NA	NA
WP_003683213.1\|1045630_1045858_-	DUF2929 family protein	NA	NA	NA	NA
WP_035437734.1\|1045948_1049248_+	DNA polymerase III subunit alpha	A0A0K1Y9G6	Streptomyces_phage	2.2e-142	32.2
WP_003684953.1\|1049386_1050808_+	pyruvate kinase	NA	NA	NA	NA
1049692:1049707	attL	NA	NA	NA	NA
WP_021349849.1\|1050963_1051851_+	S1 RNA-binding protein	NA	NA	NA	NA
1049692:1049707	attL	NA	NA	NA	NA
WP_015638921.1\|1051843_1052722_+\|integrase	tyrosine-type recombinase/integrase	A0A142K830	Mycobacterium_phage	6.4e-09	29.1
WP_003684947.1\|1052702_1053086_+	hypothetical protein	NA	NA	NA	NA
WP_003683203.1\|1053078_1053867_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.2e-11	27.5
WP_003683201.1\|1053844_1054432_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	7.5e-14	30.7
WP_003683200.1\|1054432_1055158_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_021349848.1\|1055429_1056008_+	ECF transporter S component	NA	NA	NA	NA
WP_031284577.1\|1056207_1057272_+	hypothetical protein	NA	NA	NA	NA
WP_003683188.1\|1057261_1058719_+	ATP-dependent DNA helicase RecQ	F2NZ48	Diadromus_pulchellus_ascovirus	6.8e-56	38.7
WP_003683187.1\|1058779_1059334_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_003683185.1\|1059357_1060038_+	(d)CMP kinase	NA	NA	NA	NA
WP_003683184.1\|1060114_1061347_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_024500900.1\|1061424_1062738_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_003683180.1\|1062961_1063237_+	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	3.4e-25	68.5
WP_003684932.1\|1063315_1064578_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003683175.1\|1064691_1065549_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_021350295.1\|1065714_1066917_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	3.4e-45	48.6
1066290:1066305	attR	NA	NA	NA	NA
WP_015638927.1\|1066929_1068816_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.9e-51	29.0
1066290:1066305	attR	NA	NA	NA	NA
WP_003683168.1\|1068881_1069841_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	9.1e-118	63.4
WP_003683166.1\|1069852_1070356_+	dihydrofolate reductase	A0A223LJP4	Erwinia_phage	5.6e-18	37.8
WP_003684928.1\|1070335_1070965_-	hemolysin III family protein	NA	NA	NA	NA
WP_021350296.1\|1071131_1071974_+	DegV family protein	NA	NA	NA	NA
WP_003683161.1\|1072107_1073286_-	3-phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	8.7e-62	36.8
WP_003683159.1\|1073355_1073982_+	chloramphenicol acetyltransferase	NA	NA	NA	NA
WP_003683158.1\|1074112_1075030_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_003683157.1\|1075033_1075627_+	YpmS family protein	NA	NA	NA	NA
WP_003683156.1\|1075636_1075861_+	YozE family protein	NA	NA	NA	NA
WP_014562705.1\|1076330_1077518_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_003678461.1\|1078011_1078371_+	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	8.1e-19	42.3
WP_003678459.1\|1078357_1078720_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_012391429.1\|1078765_1079986_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.1e-95	46.5
WP_042513852.1\|1080137_1081868_+	arsenical pump-driving ATPase	NA	NA	NA	NA
WP_012391429.1\|1083209_1084430_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.1e-95	46.5
WP_003678450.1\|1084747_1085116_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_021349960.1\|1085117_1085732_+	CadD family cadmium resistance transporter	NA	NA	NA	NA
WP_003678446.1\|1085756_1086311_-	helix-turn-helix transcriptional regulator	A0A1B1P888	Bacillus_phage	6.0e-05	44.3
WP_021349958.1\|1086744_1087965_+	replication initiation factor domain-containing protein	A0A1S5SEX3	Streptococcus_phage	3.8e-76	38.9
WP_021349957.1\|1088084_1088336_+	hypothetical protein	W6LM55	Streptococcus_phage	4.5e-08	43.3
WP_035436401.1\|1088424_1089684_+\|integrase	site-specific integrase	A0A1S5S9U4	Streptococcus_phage	4.1e-25	26.6
WP_014562383.1\|1089820_1090693_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_024500903.1\|1090685_1091456_+	ribonuclease HII	E3T5H8	Cafeteria_roenbergensis_virus	1.4e-20	35.2
WP_024500904.1\|1091508_1092384_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_035428782.1\|1092466_1094599_+	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	6.8e-97	36.2
WP_015638933.1\|1094727_1095570_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_003683143.1\|1095585_1096464_+	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_003683142.1\|1096531_1097143_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_003683141.1\|1097374_1099372_+	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	7.5e-122	43.2
WP_035436398.1\|1099388_1101857_+	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	1.9e-98	31.9
WP_003683135.1\|1101922_1102438_+	DUF1440 domain-containing protein	NA	NA	NA	NA
WP_003683133.1\|1102548_1103481_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA
WP_015638938.1\|1103674_1104067_+	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA
WP_003683130.1\|1104076_1104502_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_003684903.1\|1104654_1105164_+	N-acetyltransferase	NA	NA	NA	NA
WP_024271696.1\|1105156_1105612_+	GAF domain-containing protein	NA	NA	NA	NA
WP_023466126.1\|1105768_1107127_+	cytosine permease	NA	NA	NA	NA
WP_024500909.1\|1107129_1108368_+	cytosine deaminase	NA	NA	NA	NA
WP_024500910.1\|1108536_1110240_+	phosphoenolpyruvate carboxykinase	NA	NA	NA	NA
WP_014562389.1\|1110335_1110707_+	hypothetical protein	NA	NA	NA	NA
WP_035436395.1\|1110721_1112068_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	3.1e-87	43.1
WP_021349896.1\|1112064_1112745_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_014562392.1\|1113331_1114681_+	MFS transporter	NA	NA	NA	NA
WP_035436393.1\|1114807_1115011_-	hypothetical protein	NA	NA	NA	NA
WP_003683109.1\|1115025_1115181_+	hypothetical protein	NA	NA	NA	NA
WP_015638951.1\|1115167_1115458_+	hypothetical protein	NA	NA	NA	NA
WP_021349899.1\|1117300_1118527_+	NAD/NADP octopine/nopaline dehydrogenase family protein	NA	NA	NA	NA
WP_021349900.1\|1118526_1119291_+	aspartate/glutamate racemase family protein	NA	NA	NA	NA
WP_035436390.1\|1119343_1120822_-	amino acid permease	NA	NA	NA	NA
WP_021349902.1\|1120979_1122011_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
WP_031284600.1\|1122648_1123290_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_021349904.1\|1123403_1123970_+	sugar O-acetyltransferase	NA	NA	NA	NA
WP_035436387.1\|1125104_1126457_+\|transposase	transposase	NA	NA	NA	NA
WP_086031776.1\|1126538_1127675_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.0e-43	33.3

DBSCAN-SWA_11

1133229 : 1192578

Staphylococcus_phage(16.67%)

transposase,capsid,integrase

attL 1129753:1129771|attR 1198212:1198230

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1129753:1129771	attL	NA	NA	NA	NA
WP_021349962.1\|1133229_1134126_+\|capsid	phage capsid protein	U3PFU0	Lactobacillus_phage	2.3e-62	46.8
WP_003683059.1\|1134655_1135546_-	alpha/beta hydrolase	Q854G2	Mycobacterium_phage	9.7e-13	26.8
WP_021349963.1\|1135564_1136089_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003683056.1\|1136436_1137363_+	YdcF family protein	NA	NA	NA	NA
WP_024271964.1\|1137396_1138269_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	9.4e-53	43.1
WP_024271965.1\|1138361_1138847_-	ECF transporter S component	NA	NA	NA	NA
WP_003683053.1\|1138862_1139693_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_014562402.1\|1139879_1141133_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA
WP_003683045.1\|1141893_1142973_+	tyrosine recombinase XerS	A0A0E3XA96	Gordonia_phage	1.6e-06	30.0
WP_003683043.1\|1142974_1143901_+	linear amide C-N hydrolase	NA	NA	NA	NA
WP_024500921.1\|1143928_1145107_-	putative C-S lyase	NA	NA	NA	NA
WP_048340509.1\|1145240_1146404_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	9.9e-159	70.9
WP_035437536.1\|1147358_1148411_+	2,3-butanediol dehydrogenase	A0A2K9L7I1	Tupanvirus	6.1e-14	25.9
WP_021350180.1\|1148503_1149463_-	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_003684840.1\|1149478_1150108_-	ABC transporter permease	NA	NA	NA	NA
WP_035437538.1\|1150104_1150872_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.4e-22	37.1
WP_003683036.1\|1150852_1151497_-	ABC transporter permease	NA	NA	NA	NA
WP_003684836.1\|1151647_1152550_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_015638987.1\|1152691_1153141_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_003683030.1\|1153178_1153604_-	OsmC family protein	NA	NA	NA	NA
WP_021350184.1\|1153603_1154140_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_021349692.1\|1157508_1157988_-	hypothetical protein	NA	NA	NA	NA
WP_051132356.1\|1157991_1158426_-	MFS transporter	NA	NA	NA	NA
WP_021349347.1\|1160767_1161196_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_042513914.1\|1161375_1162662_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_086031777.1\|1162821_1163286_-	hypothetical protein	NA	NA	NA	NA
WP_086031761.1\|1163351_1164572_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	8.1e-95	46.2
WP_086031778.1\|1164586_1165039_-	hypothetical protein	NA	NA	NA	NA
WP_021349509.1\|1165230_1166238_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	5.2e-15	25.3
WP_012390893.1\|1166295_1167183_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	7.6e-34	42.3
WP_048340510.1\|1167870_1169091_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.6e-95	46.2
WP_086031779.1\|1169105_1169699_-	DUF3737 family protein	NA	NA	NA	NA
WP_048340512.1\|1170554_1171169_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	7.3e-28	38.0
WP_086031781.1\|1171496_1172420_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	6.7e-33	31.9
WP_021349264.1\|1172546_1173167_-\|integrase	tyrosine-type recombinase/integrase	D2XR58	Bacillus_phage	3.0e-21	35.3
WP_035435926.1\|1173463_1174243_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_021349259.1\|1176242_1176410_-	hypothetical protein	NA	NA	NA	NA
WP_003688751.1\|1176655_1176943_+\|transposase	transposase	NA	NA	NA	NA
WP_021349454.1\|1178921_1179305_-	PaaI family thioesterase	NA	NA	NA	NA
WP_003683002.1\|1179339_1180161_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_014562409.1\|1180170_1181595_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.4e-69	32.5
WP_003683000.1\|1181642_1182836_+	MFS transporter	NA	NA	NA	NA
WP_024500926.1\|1183066_1184137_+	NAD(P)-dependent alcohol dehydrogenase	E3SJ82	Synechococcus_phage	3.0e-08	24.9
WP_014562411.1\|1184358_1185501_-	PLP-dependent transferase	NA	NA	NA	NA
WP_012391259.1\|1185513_1186425_-	PLP-dependent cysteine synthase family protein	A0A1X9I5K7	Streptococcus_phage	5.4e-59	40.8
WP_003682996.1\|1186766_1187033_+	ACT domain-containing protein	NA	NA	NA	NA
WP_021349455.1\|1187042_1188386_+	PFL family protein	NA	NA	NA	NA
WP_003682993.1\|1188576_1189509_-	WYL domain-containing protein	NA	NA	NA	NA
WP_003682992.1\|1189589_1189982_+	hypothetical protein	NA	NA	NA	NA
WP_021349457.1\|1190203_1190404_-	hypothetical protein	NA	NA	NA	NA
WP_014562415.1\|1191591_1192578_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	3.6e-45	36.9
1198212:1198230	attR	NA	NA	NA	NA

DBSCAN-SWA_12

1213539 : 1266643

Staphylococcus_phage(33.33%)

transposase,integrase

attL 1263456:1263492|attR 1271447:1271483

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173425567.1\|1213539_1214526_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.8e-45	36.9
WP_014562430.1\|1214692_1216078_-	amino acid permease	NA	NA	NA	NA
WP_003682956.1\|1216352_1217315_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_042513919.1\|1217631_1219410_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_035437577.1\|1219569_1220805_+	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_003682951.1\|1220808_1221489_+	TVP38/TMEM64 family protein	NA	NA	NA	NA
WP_021353998.1\|1221644_1222622_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_024271972.1\|1222659_1223097_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	1.2e-24	42.2
WP_024271971.1\|1223102_1223645_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_024271970.1\|1223736_1224270_-	phenolic acid decarboxylase	NA	NA	NA	NA
WP_003682943.1\|1224418_1224691_-	hypothetical protein	NA	NA	NA	NA
WP_021349991.1\|1224831_1225947_-	membrane protein	NA	NA	NA	NA
WP_003682939.1\|1226426_1227257_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_021349990.1\|1227451_1228825_-	glutamate--cysteine ligase	NA	NA	NA	NA
WP_021349989.1\|1229192_1230377_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_035437463.1\|1230552_1231884_-	guanine deaminase	NA	NA	NA	NA
WP_004563085.1\|1232005_1233157_-	ArgE/DapE family deacylase	NA	NA	NA	NA
WP_021349987.1\|1233413_1233563_-	hypothetical protein	NA	NA	NA	NA
WP_138464718.1\|1233575_1233887_-	hypothetical protein	NA	NA	NA	NA
WP_021349985.1\|1234066_1234483_-	arsenate reductase ArsC	A0A2H4PQT9	Staphylococcus_phage	1.5e-13	35.8
WP_024271969.1\|1235233_1235662_-	NADH-dependent oxidoreductase	NA	NA	NA	NA
WP_003688751.1\|1235929_1236217_+\|transposase	transposase	NA	NA	NA	NA
WP_048340463.1\|1236240_1237119_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-42	36.8
WP_003682913.1\|1237656_1238424_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_035437564.1\|1239402_1241085_-	acetolactate synthase AlsS	NA	NA	NA	NA
WP_035437566.1\|1241569_1243294_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_023465823.1\|1243389_1244142_-	hypothetical protein	NA	NA	NA	NA
WP_015639076.1\|1244324_1244885_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_107760586.1\|1245117_1246002_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_050755181.1\|1245989_1246610_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	7.4e-28	37.9
WP_021349699.1\|1246792_1247512_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_035435887.1\|1248037_1249957_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_021349211.1\|1250127_1250841_+	trehalose operon repressor	NA	NA	NA	NA
WP_021349212.1\|1250851_1252513_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_080650636.1\|1254480_1255698_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_021350120.1\|1255657_1255804_-	hypothetical protein	NA	NA	NA	NA
WP_003683569.1\|1256318_1256651_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	3.0e-12	40.9
WP_004563102.1\|1256647_1257013_-	CrcB family protein	NA	NA	NA	NA
WP_004563103.1\|1257136_1257529_+	VOC family protein	NA	NA	NA	NA
WP_003683563.1\|1257603_1258161_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003683557.1\|1260218_1260917_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_021350118.1\|1261205_1262123_-	ROK family protein	NA	NA	NA	NA
WP_021350117.1\|1262194_1262470_+	hypothetical protein	NA	NA	NA	NA
WP_021350116.1\|1262496_1262955_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA
1263456:1263492	attL	NA	NA	NA	NA
WP_042513877.1\|1263574_1264417_-\|integrase	site-specific integrase	E9LUK6	Lactobacillus_phage	3.9e-64	45.4
WP_003688751.1\|1264486_1264774_+\|transposase	transposase	NA	NA	NA	NA
WP_012391066.1\|1265495_1265747_+\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	4.6e-37	95.2
WP_042513964.1\|1265800_1266643_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	9.7e-156	98.6
1271447:1271483	attR	NA	NA	NA	NA

DBSCAN-SWA_13

1383327 : 1489494

Paenibacillus_phage(25.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048340520.1\|1383327_1384578_-\|transposase	transposase	A0A286QQE5	Streptococcus_phage	9.0e-57	37.2
WP_042513997.1\|1384872_1386030_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	3.6e-36	28.8
WP_003617037.1\|1386174_1386810_+	carbonic anhydrase family protein	NA	NA	NA	NA
WP_003683319.1\|1387002_1389507_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_035437492.1\|1389508_1390591_-	carbamoyl phosphate synthase small subunit	NA	NA	NA	NA
WP_046947974.1\|1390620_1391496_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_021350105.1\|1391536_1391974_-	signal peptidase II	NA	NA	NA	NA
WP_035437494.1\|1391973_1392408_-	hypothetical protein	NA	NA	NA	NA
WP_003683308.1\|1392420_1392822_+	ribonuclease HI family protein	NA	NA	NA	NA
WP_004563210.1\|1392977_1393580_-	nitroreductase family protein	NA	NA	NA	NA
WP_003683304.1\|1393803_1394667_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_012391396.1\|1394880_1395570_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_080650635.1\|1395656_1396355_-	glycosyltransferase	NA	NA	NA	NA
WP_003688751.1\|1396476_1396764_+\|transposase	transposase	NA	NA	NA	NA
WP_151130343.1\|1397649_1398498_-	hypothetical protein	NA	NA	NA	NA
WP_051132368.1\|1399203_1400682_+	amidase	NA	NA	NA	NA
WP_024501009.1\|1401894_1403028_-	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_003683293.1\|1403070_1403520_-	NUDIX hydrolase	NA	NA	NA	NA
WP_021349973.1\|1403523_1404705_-	ATP-binding protein	NA	NA	NA	NA
WP_035436886.1\|1404812_1406747_-	GTP-binding protein	D0R0F5	Streptococcus_phage	5.3e-64	28.6
WP_015639179.1\|1407280_1407640_-	cell division regulator GpsB	NA	NA	NA	NA
WP_024501011.1\|1407747_1408344_-	DUF1273 domain-containing protein	NA	NA	NA	NA
WP_021349975.1\|1408435_1409071_+	Holliday junction resolvase RecU	A0A1C8E9C3	Bacillus_phage	1.1e-23	36.6
WP_004563220.1\|1409063_1411328_+	transglycosylase domain-containing protein	NA	NA	NA	NA
WP_004563221.1\|1411442_1412354_-	EamA family transporter	NA	NA	NA	NA
WP_014562510.1\|1412476_1413496_+	aldo/keto reductase	NA	NA	NA	NA
WP_003683271.1\|1413687_1414695_-	DUF1002 domain-containing protein	NA	NA	NA	NA
WP_035436895.1\|1414794_1415523_-	DnaD domain protein	A0A0N7AE27	Bacillus_phage	3.5e-13	37.1
WP_004563225.1\|1415614_1416910_-\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	7.4e-54	29.2
WP_004563226.1\|1416936_1417455_-	DUF5590 domain-containing protein	NA	NA	NA	NA
WP_004563227.1\|1417505_1420346_-	3'-5' exoribonuclease	A0A1X9I5C8	Streptococcus_phage	3.6e-61	34.6
WP_003683265.1\|1420574_1421510_+	mevalonate kinase	NA	NA	NA	NA
WP_035436899.1\|1421511_1422501_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_003683263.1\|1422520_1423630_+	phosphomevalonate kinase	NA	NA	NA	NA
WP_003683262.1\|1423685_1424771_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_035436902.1\|1424927_1425686_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.8e-12	30.9
WP_157660922.1\|1425881_1426109_-\|transposase	transposase	A0A0P0ICY9	Lactobacillus_phage	2.2e-14	56.1
WP_014562705.1\|1426254_1427442_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_035435997.1\|1429079_1430453_-	RsmB/NOP family class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_035435993.1\|1430580_1431387_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_086031786.1\|1431608_1432106_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_151130348.1\|1433059_1433902_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.6e-41	36.1
WP_086031788.1\|1433962_1434250_-\|transposase	transposase	NA	NA	NA	NA
WP_086031789.1\|1434468_1435083_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.0e-26	37.5
WP_157660921.1\|1436040_1436331_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.5e-10	37.2
WP_086031791.1\|1436293_1437235_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.7e-12	30.2
WP_035435979.1\|1437317_1438424_+	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_024500815.1\|1438580_1439495_-\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	4.3e-32	32.3
WP_003606447.1\|1439796_1440045_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_048340531.1\|1440119_1441340_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.4e-94	46.2
WP_086031734.1\|1446015_1446948_+\|transposase	IS30 family transposase	H7BW61	unidentified_phage	8.5e-28	30.7
WP_086031793.1\|1446989_1447217_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_035437581.1\|1447393_1449166_-	oleate hydratase	NA	NA	NA	NA
WP_035437582.1\|1449653_1450985_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_035437584.1\|1451663_1453403_+	pyruvate oxidase	NA	NA	NA	NA
WP_035437501.1\|1455830_1456748_-	dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_086031794.1\|1456760_1459940_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_024501023.1\|1459939_1461022_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	1.9e-55	35.6
WP_024501024.1\|1461023_1462313_-	dihydroorotase	NA	NA	NA	NA
WP_035437505.1\|1462312_1463278_-	aspartate carbamoyltransferase catalytic subunit	A0A1J0F9B8	Only_Syngen_Nebraska_virus	5.9e-24	30.5
WP_035437507.1\|1463613_1464408_-	putative hydro-lyase	NA	NA	NA	NA
WP_086031795.1\|1464975_1466289_-\|transposase	transposase	NA	NA	NA	NA
WP_035436293.1\|1466341_1467307_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	4.4e-19	28.7
WP_035436289.1\|1467546_1468092_-	hypothetical protein	NA	NA	NA	NA
WP_035436286.1\|1468278_1468407_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_035436283.1\|1468433_1468598_+	50S ribosomal protein L32	NA	NA	NA	NA
WP_035436280.1\|1468597_1468915_+	hypothetical protein	NA	NA	NA	NA
WP_086031796.1\|1468902_1469016_+	putative metal homeostasis protein	NA	NA	NA	NA
WP_154244373.1\|1469164_1469323_-	hypothetical protein	NA	NA	NA	NA
WP_154244374.1\|1469370_1469535_-	hypothetical protein	NA	NA	NA	NA
WP_035436277.1\|1471341_1471893_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_035436274.1\|1471904_1473305_+	SLC13 family permease	NA	NA	NA	NA
WP_035436271.1\|1473430_1474327_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_035436269.1\|1474371_1474791_-	amino acid decarboxylase	NA	NA	NA	NA
WP_154244375.1\|1474810_1474978_-	hypothetical protein	NA	NA	NA	NA
WP_035436266.1\|1475251_1475731_-	hypothetical protein	NA	NA	NA	NA
WP_035436263.1\|1477322_1478201_-	type I-E CRISPR-associated endoribonuclease Cas2	NA	NA	NA	NA
WP_015639203.1\|1478204_1479143_-	type I-E CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_015639204.1\|1479139_1479796_-	type I-E CRISPR-associated protein Cas6/Cse3/CasE	NA	NA	NA	NA
WP_035436299.1\|1479808_1480516_-	type I-E CRISPR-associated protein Cas5/CasD	NA	NA	NA	NA
WP_035436260.1\|1480496_1481597_-	type I-E CRISPR-associated protein Cas7/Cse4/CasC	NA	NA	NA	NA
WP_035436257.1\|1481605_1482190_-	type I-E CRISPR-associated protein Cse2/CasB	NA	NA	NA	NA
WP_035436252.1\|1482206_1483865_-	type I-E CRISPR-associated protein Cse1/CasA	NA	NA	NA	NA
WP_035436249.1\|1483845_1486587_-	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA
WP_003683897.1\|1486817_1487177_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_024501037.1\|1487297_1488725_-	amino acid permease	NA	NA	NA	NA
WP_003683893.1\|1488735_1489494_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_14

1598847 : 1727990

116

Streptococcus_phage(25.0%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035436180.1\|1598847_1599531_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003686160.1\|1599549_1600557_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003683654.1\|1600630_1601239_-	hypothetical protein	NA	NA	NA	NA
WP_003683652.1\|1601368_1602001_+	deoxynucleoside kinase	C1KFI3	Lactobacillus_virus	8.6e-48	46.8
WP_035436178.1\|1602100_1603219_-	glucosaminidase domain-containing protein	A0A0K2CP65	Brevibacillus_phage	3.5e-20	43.8
WP_035436175.1\|1603309_1604698_-	L,D-transpeptidase	NA	NA	NA	NA
WP_021816360.1\|1604823_1605324_-	universal stress protein	NA	NA	NA	NA
WP_035436174.1\|1605403_1606804_-	dipeptidase PepV	NA	NA	NA	NA
WP_035436171.1\|1606911_1607787_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_012391496.1\|1607780_1608158_+	DUF302 domain-containing protein	NA	NA	NA	NA
WP_015639265.1\|1608202_1609849_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_003683636.1\|1609961_1610225_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_023466532.1\|1610668_1613086_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	67.1
WP_035436168.1\|1613423_1614155_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_035436165.1\|1614413_1615655_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	6.5e-108	55.4
WP_015639270.1\|1615657_1616449_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.6e-43	39.1
WP_003686137.1\|1616731_1617919_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.7e-143	67.9
WP_021349074.1\|1618112_1618844_+	hypothetical protein	NA	NA	NA	NA
WP_035436163.1\|1618937_1619474_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_014562566.1\|1619512_1620946_-	MFS transporter	NA	NA	NA	NA
WP_021349073.1\|1621067_1621523_+	transcriptional repressor	NA	NA	NA	NA
WP_021349072.1\|1621741_1623109_-	amino acid permease	NA	NA	NA	NA
WP_003683616.1\|1623280_1623439_+	hypothetical protein	NA	NA	NA	NA
WP_021349071.1\|1623448_1624066_+	LysR family transcriptional regulator substrate-binding protein	NA	NA	NA	NA
WP_003686125.1\|1624168_1624411_-	hypothetical protein	NA	NA	NA	NA
WP_086031799.1\|1624718_1625969_-\|transposase	transposase	A0A286QQE5	Streptococcus_phage	9.0e-57	37.0
WP_012390701.1\|1626047_1626500_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.8e-32	51.5
WP_173425572.1\|1626532_1626670_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_015639280.1\|1626659_1627178_+	TetR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA
WP_012391508.1\|1627332_1627764_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_012391509.1\|1627975_1628479_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_021349266.1\|1628632_1629493_-	LysM peptidoglycan-binding domain-containing protein	A0A249XZV3	Enterococcus_phage	8.2e-17	66.7
WP_042513917.1\|1629901_1630972_-	NAD(P)-dependent alcohol dehydrogenase	E3SJ82	Synechococcus_phage	1.5e-07	25.2
WP_035437347.1\|1631180_1632518_-	purine/pyrimidine permease	Q9KX94	Enterobacteria_phage	8.5e-21	29.0
WP_012391513.1\|1632669_1633542_-	SufD family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_012391514.1\|1633550_1634132_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A0C5K925	Enterococcus_phage	3.6e-53	59.7
WP_031284742.1\|1634076_1636293_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	1.3e-247	58.8
WP_003683592.1\|1636660_1637344_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_014562572.1\|1637366_1638188_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_035437353.1\|1638453_1638774_-	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_003683586.1\|1638921_1639071_+	hypothetical protein	NA	NA	NA	NA
WP_003683584.1\|1639087_1639468_+	hypothetical protein	NA	NA	NA	NA
WP_014562466.1\|1639654_1640653_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-50	38.4
WP_021350166.1\|1647048_1647297_-	DUF1797 family protein	NA	NA	NA	NA
WP_004563064.1\|1647630_1648650_-	flippase-like domain-containing protein	NA	NA	NA	NA
WP_035437166.1\|1648651_1649677_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_035437163.1\|1649669_1650887_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_035437160.1\|1651102_1652833_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_004563061.1\|1652834_1653101_-	phosphocarrier protein HPr	NA	NA	NA	NA
WP_051132377.1\|1653230_1653473_-	hypothetical protein	NA	NA	NA	NA
WP_021350169.1\|1653646_1655893_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	1.7e-122	39.1
WP_012391521.1\|1656145_1656853_+	NUDIX hydrolase	NA	NA	NA	NA
WP_003684192.1\|1656979_1657555_+	cysteine hydrolase	NA	NA	NA	NA
WP_012391523.1\|1657547_1658975_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	2.3e-96	44.7
WP_003684189.1\|1659261_1659855_-	ECF transporter S component	NA	NA	NA	NA
WP_021349807.1\|1660010_1660730_+	MucBP domain-containing protein	NA	NA	NA	NA
WP_003684186.1\|1660740_1661529_+	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	7.5e-25	34.5
WP_035437156.1\|1661518_1662403_+	DMT family transporter	NA	NA	NA	NA
WP_024501089.1\|1662481_1663726_+	carboxylate--amine ligase	NA	NA	NA	NA
WP_014562415.1\|1663790_1664777_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	3.6e-45	36.9
WP_086031800.1\|1665335_1666586_-\|transposase	transposase	A0A286QQE5	Streptococcus_phage	2.6e-56	37.0
WP_086031801.1\|1666664_1667117_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	1.8e-31	50.8
WP_035435855.1\|1667468_1668167_-	hypothetical protein	NA	NA	NA	NA
WP_024501090.1\|1668179_1669040_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.3e-17	30.2
WP_003684176.1\|1669026_1669404_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_035435859.1\|1669513_1670446_-	dTDP-glucose 4,6-dehydratase	M1I5F1	Acanthocystis_turfacea_Chlorella_virus	6.1e-58	40.2
WP_035435862.1\|1670472_1672218_-	hypothetical protein	NA	NA	NA	NA
WP_031274336.1\|1672263_1673172_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_100184896.1\|1673189_1674221_-	sugar transferase	NA	NA	NA	NA
WP_003684164.1\|1674259_1675840_-	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	2.5e-32	27.3
WP_042513950.1\|1676141_1677500_-\|transposase	transposase	NA	NA	NA	NA
WP_035437589.1\|1677628_1678606_-	glycosyltransferase family 2 protein	A8CG95	Salmonella_phage	1.0e-47	34.8
WP_035437591.1\|1678694_1679804_-	AI-2E family transporter	NA	NA	NA	NA
WP_021350368.1\|1679803_1680736_-	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	5.8e-77	50.0
WP_080650637.1\|1680825_1681389_-	hypothetical protein	NA	NA	NA	NA
WP_086031802.1\|1681531_1683127_-	C40 family peptidase	A0A1J0GW44	Streptomyces_phage	3.6e-10	43.0
WP_086031804.1\|1685181_1686105_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	1.8e-30	30.7
WP_035436033.1\|1686164_1687751_+	hypothetical protein	NA	NA	NA	NA
WP_086031805.1\|1688070_1689291_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.8e-95	46.5
WP_154244343.1\|1689529_1691098_-	hypothetical protein	NA	NA	NA	NA
WP_086031806.1\|1691714_1693433_-	glucosaminidase domain-containing protein	Q9ZXE4	Bacillus_phage	3.5e-19	45.0
WP_035436865.1\|1693578_1694637_-	acyltransferase	NA	NA	NA	NA
WP_004563040.1\|1694646_1696065_-	flippase	NA	NA	NA	NA
WP_003684138.1\|1696067_1697189_-	UDP-galactopyranose mutase	E4ZFQ1	Streptococcus_phage	7.5e-172	77.8
WP_004563039.1\|1697303_1697921_-	LPS biosynthesis protein	NA	NA	NA	NA
WP_004563038.1\|1697895_1699119_-	hypothetical protein	NA	NA	NA	NA
WP_012391550.1\|1699129_1699891_-	DUF4422 domain-containing protein	NA	NA	NA	NA
WP_003684130.1\|1699902_1700556_-	sugar transferase	NA	NA	NA	NA
WP_003684129.1\|1700725_1701544_-	recombination regulator RecX	NA	NA	NA	NA
WP_003684128.1\|1701637_1701844_+	hypothetical protein	NA	NA	NA	NA
WP_003684127.1\|1701879_1702095_+	DUF2922 domain-containing protein	NA	NA	NA	NA
WP_014562591.1\|1702275_1703172_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_035436862.1\|1703300_1706240_-	LTA synthase family protein	NA	NA	NA	NA
WP_021349826.1\|1706395_1707253_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_012391556.1\|1707365_1707812_+	flavodoxin	NA	NA	NA	NA
WP_024501110.1\|1707821_1708256_+	GtrA family protein	NA	NA	NA	NA
WP_107504378.1\|1708494_1708584_+	hypothetical protein	NA	NA	NA	NA
WP_035436871.1\|1708911_1710231_-	DEAD/DEAH box helicase	E3T5E1	Cafeteria_roenbergensis_virus	9.5e-33	29.8
WP_003684114.1\|1710243_1711254_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_035436858.1\|1711418_1711784_+	DUF4828 domain-containing protein	NA	NA	NA	NA
WP_003684112.1\|1711925_1712495_+	TIGR00730 family Rossman fold protein	NA	NA	NA	NA
WP_035436855.1\|1712495_1713398_-	L-2-hydroxyisocaproate dehydrogenase	NA	NA	NA	NA
WP_035436852.1\|1713562_1715071_-	glutamate--cysteine ligase	NA	NA	NA	NA
WP_003684109.1\|1715185_1715965_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_003684108.1\|1716107_1716461_+	iron-sulfur cluster biosynthesis protein	NA	NA	NA	NA
WP_024271931.1\|1717002_1718628_-	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.3e-44	25.3
WP_014562466.1\|1719902_1720901_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-50	38.4
WP_014081459.1\|1721192_1721591_-\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	1.1e-45	62.9
WP_004563019.1\|1721772_1722240_-	DNA starvation/stationary phase protection protein	A0A291I9P0	Lactobacillus_phage	9.2e-15	31.5
WP_004563015.1\|1722320_1722884_-	hypothetical protein	NA	NA	NA	NA
WP_003684096.1\|1723353_1724613_-	LCP family protein	NA	NA	NA	NA
WP_003684094.1\|1724835_1725384_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_021349820.1\|1725591_1726002_+	MFS transporter	NA	NA	NA	NA
WP_145998167.1\|1725955_1726756_+	MFS transporter	NA	NA	NA	NA
WP_035437180.1\|1726787_1727306_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	6.0e-31	45.5
WP_035437183.1\|1727396_1727990_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_15

1731879 : 1796675

Erysipelothrix_phage(45.45%)

transposase,terminase,holin,tRNA,head,tail,protease,capsid,integrase,portal

attL 1759667:1759726|attR 1802760:1802871

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080650627.1\|1731879_1732386_-\|tRNA	prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_035437193.1\|1732461_1733244_+	dimethylargininase	NA	NA	NA	NA
WP_035437196.1\|1733631_1735029_+	sodium:proton antiporter	NA	NA	NA	NA
WP_080650628.1\|1735454_1736576_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_035437199.1\|1736985_1737249_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_035437201.1\|1737245_1737500_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_041807836.1\|1737748_1738036_+\|transposase	transposase	NA	NA	NA	NA
WP_086031809.1\|1738059_1738938_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.8e-40	35.7
WP_080650602.1\|1739735_1740500_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_154244344.1\|1740706_1741612_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_035431426.1\|1741548_1742163_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003688751.1\|1743618_1743906_-\|transposase	transposase	NA	NA	NA	NA
WP_035436028.1\|1744220_1745339_-\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_035436025.1\|1745326_1745644_-	hypothetical protein	NA	NA	NA	NA
WP_154244345.1\|1745907_1746750_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	9.1e-154	97.9
WP_086031812.1\|1746803_1747055_-\|transposase	transposase	Q6J1X3	Lactobacillus_phage	7.8e-37	94.0
WP_014562705.1\|1747386_1748574_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_154244346.1\|1748570_1748903_-	hypothetical protein	NA	NA	NA	NA
WP_003681672.1\|1748874_1749525_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_003681670.1\|1749549_1749831_-	hypothetical protein	NA	NA	NA	NA
WP_003681668.1\|1749882_1750110_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_035435921.1\|1750132_1752061_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.1e-93	33.9
WP_024501125.1\|1752209_1752770_-	hypothetical protein	NA	NA	NA	NA
WP_042513934.1\|1752855_1753311_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	1.8e-31	49.3
WP_012391038.1\|1753384_1754635_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.4e-57	37.3
WP_086031815.1\|1756051_1757239_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.0e-37	29.1
WP_086031817.1\|1757721_1758861_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.1e-42	33.3
WP_021816442.1\|1758950_1759454_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
1759667:1759726	attL	NA	NA	NA	NA
WP_035437646.1\|1760301_1760532_-	hypothetical protein	NA	NA	NA	NA
WP_035437649.1\|1760557_1763674_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	1.3e-67	26.5
WP_048340506.1\|1764025_1764958_+\|transposase	IS30 family transposase	H7BW61	unidentified_phage	1.1e-27	30.7
WP_086031818.1\|1764948_1765359_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_035435818.1\|1765355_1765898_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_035435815.1\|1765914_1766886_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	6.8e-36	30.8
WP_035435812.1\|1766958_1768104_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_035435809.1\|1768093_1769626_-	SAM-dependent DNA methyltransferase	A0A2H4PQP4	Staphylococcus_phage	2.8e-52	30.8
WP_035435808.1\|1769628_1769835_-	helix-turn-helix transcriptional regulator	A0A2K5B261	Erysipelothrix_phage	2.3e-18	68.7
WP_035435803.1\|1769997_1770894_-	hypothetical protein	NA	NA	NA	NA
WP_035435799.1\|1771278_1771737_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_035435797.1\|1771818_1772022_+	hypothetical protein	NA	NA	NA	NA
WP_035435794.1\|1772005_1772341_+	hypothetical protein	A0A2K5B2A7	Erysipelothrix_phage	1.6e-05	32.7
WP_035435791.1\|1772337_1773477_+	DUF2800 domain-containing protein	A0A2K5B2A8	Erysipelothrix_phage	4.9e-110	53.0
WP_035435789.1\|1773478_1774030_+	DUF2815 family protein	A0A2K5B2A9	Erysipelothrix_phage	2.0e-72	73.2
WP_014562466.1\|1774190_1775189_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-50	38.4
WP_035435845.1\|1775211_1777146_+	DNA polymerase	A0A2K5B2B0	Erysipelothrix_phage	4.6e-225	58.0
WP_035435842.1\|1777232_1777619_+	hypothetical protein	NA	NA	NA	NA
WP_035435838.1\|1777621_1779877_+	primase C-terminal domain-containing protein	A0A1X9I6B6	Streptococcus_phage	4.7e-213	48.6
WP_021349830.1\|1780090_1780372_+	VRR-NUC domain-containing protein	A0A1B0RXC4	Streptococcus_phage	2.6e-20	53.3
WP_035435834.1\|1780352_1781708_+	DEAD/DEAH box helicase	A0A2K5B273	Erysipelothrix_phage	4.1e-156	66.8
WP_021349831.1\|1781704_1782172_+	hypothetical protein	NA	NA	NA	NA
WP_021349832.1\|1782318_1782696_+	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	5.7e-31	54.7
WP_021349833.1\|1782816_1783359_+\|terminase	P27 family phage terminase small subunit	A0A2K5B277	Erysipelothrix_phage	1.1e-56	59.9
WP_048340505.1\|1784243_1785122_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	5.2e-43	36.8
WP_041812698.1\|1785145_1785433_-\|transposase	transposase	NA	NA	NA	NA
WP_021349835.1\|1785979_1786600_+	hypothetical protein	A0A2K5B280	Erysipelothrix_phage	6.5e-40	43.6
WP_021349836.1\|1786602_1786809_+	DUF5049 domain-containing protein	NA	NA	NA	NA
WP_080650631.1\|1786909_1788472_+\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	5.5e-245	76.5
WP_021349838.1\|1788500_1789766_+\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	5.5e-155	62.3
WP_003671987.1\|1789762_1790434_+\|protease	Clp protease ClpP	Q6DMU1	Streptococcus_phage	4.4e-58	52.2
WP_021349839.1\|1790452_1791631_+\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	3.1e-128	58.7
WP_003671991.1\|1791647_1791926_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_021349840.1\|1791925_1792309_+\|head	phage head closure protein	NA	NA	NA	NA
WP_021349841.1\|1792295_1792706_+\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	1.7e-41	65.8
WP_035437374.1\|1793174_1793408_+	hypothetical protein	NA	NA	NA	NA
WP_035437377.1\|1793443_1795105_+	recombinase family protein	A0A2K5B2B2	Erysipelothrix_phage	5.5e-102	39.1
WP_035437379.1\|1795097_1796675_+	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	1.1e-131	48.9
1802760:1802871	attR	NA	NA	NA	NA

DBSCAN-SWA_16

1853923 : 1882310

Lactococcus_phage(25.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024501138.1\|1853923_1856428_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	1.1e-125	40.7
WP_003681550.1\|1856446_1856917_-	CtsR family transcriptional regulator	NA	NA	NA	NA
WP_024501139.1\|1857056_1858076_-	alcohol dehydrogenase AdhP	A0A2K9L7I1	Tupanvirus	1.1e-28	29.9
WP_003681545.1\|1858362_1859079_+	hypothetical protein	NA	NA	NA	NA
WP_024501140.1\|1859140_1859806_-	2'-5' RNA ligase family protein	NA	NA	NA	NA
WP_080963713.1\|1859838_1860096_-	hypothetical protein	NA	NA	NA	NA
WP_086031821.1\|1861433_1861871_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.4e-49	71.7
WP_086031822.1\|1861933_1862959_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	8.7e-42	34.8
WP_051132383.1\|1863145_1863571_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_035437484.1\|1863567_1864071_-	energy coupling factor transporter S component ThiW	NA	NA	NA	NA
WP_024501143.1\|1864914_1865745_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_035437481.1\|1865803_1866091_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_035437478.1\|1866063_1866384_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_015639408.1\|1866396_1866567_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_003681522.1\|1867307_1867949_-	deoxynucleoside kinase	C1KFI3	Lactobacillus_virus	5.4e-58	52.5
WP_024501145.1\|1868079_1869573_-	amino acid permease	NA	NA	NA	NA
WP_012391607.1\|1869879_1870347_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_024501146.1\|1870391_1871201_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_024501147.1\|1871419_1872088_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_003681512.1\|1872142_1872631_-	threonine/serine exporter family protein	NA	NA	NA	NA
WP_024501148.1\|1872640_1873390_-	threonine/serine exporter family protein	NA	NA	NA	NA
WP_086031824.1\|1873553_1874840_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_014562466.1\|1875033_1876032_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-50	38.4
WP_004562929.1\|1876163_1876364_-	cold-shock protein	Q9AZD3	Lactococcus_phage	6.9e-20	66.7
WP_004562927.1\|1876512_1877172_-	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_014562621.1\|1877325_1878231_+	cation transporter	A0A1V0SED0	Indivirus	1.3e-09	32.0
WP_024501149.1\|1878385_1879081_-	VIT family protein	NA	NA	NA	NA
WP_003681498.1\|1879098_1879782_-	VIT family protein	NA	NA	NA	NA
WP_003681496.1\|1879930_1880407_-	universal stress protein	NA	NA	NA	NA
WP_035436404.1\|1880612_1881047_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_024501150.1\|1881095_1882310_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_17

2095577 : 2223610

106

Paenibacillus_phage(17.24%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080965008.1\|2095577_2096486_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.9e-11	29.6
WP_014562701.1\|2096785_2097796_-	nickel transporter NixA	NA	NA	NA	NA
WP_021349213.1\|2097824_2098652_-	ATP-dependent sacrificial sulfur transferase LarE	NA	NA	NA	NA
WP_012391743.1\|2098676_2099387_-	aquaporin family protein	NA	NA	NA	NA
WP_012391744.1\|2099388_2100753_-	nickel pincer cofactor biosynthesis protein LarC	NA	NA	NA	NA
WP_012391429.1\|2100915_2102136_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.1e-95	46.5
WP_012391746.1\|2102857_2104141_-	nickel-dependent lactate racemase	NA	NA	NA	NA
WP_023466300.1\|2104381_2105053_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_014562705.1\|2107137_2108325_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_014562706.1\|2109590_2111312_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_003681137.1\|2111499_2112828_-	L-fucose:H+ symporter permease	NA	NA	NA	NA
WP_003681135.1\|2112842_2113238_-	D-ribose pyranase	NA	NA	NA	NA
WP_021349696.1\|2113261_2114179_-	ribokinase	NA	NA	NA	NA
WP_021349649.1\|2114423_2115383_-	sugar-binding transcriptional regulator	NA	NA	NA	NA
WP_012391752.1\|2115486_2116140_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_003685477.1\|2116153_2117170_+	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_003685479.1\|2117203_2118151_+	ribokinase	NA	NA	NA	NA
WP_014562709.1\|2118210_2119635_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_014562710.1\|2119832_2120837_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_021350294.1\|2121390_2122896_-	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA
WP_042513835.1\|2123686_2125045_+\|transposase	transposase	NA	NA	NA	NA
WP_014562712.1\|2125636_2128036_-	phosphoketolase family protein	NA	NA	NA	NA
WP_012391758.1\|2128241_2129039_-	HAD family hydrolase	NA	NA	NA	NA
WP_003685491.1\|2129045_2129774_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003681115.1\|2129917_2130418_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_035436983.1\|2130421_2131165_+	hypothetical protein	NA	NA	NA	NA
WP_021349122.1\|2131224_2132661_+	C69 family dipeptidase	NA	NA	NA	NA
WP_014562716.1\|2132896_2133709_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_014562717.1\|2133974_2134490_-	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_003685499.1\|2134499_2135027_-	hypothetical protein	NA	NA	NA	NA
WP_003681106.1\|2135175_2136561_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_003681105.1\|2136647_2137112_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA
WP_021349399.1\|2137356_2137788_-	VOC family protein	NA	NA	NA	NA
WP_021349400.1\|2137980_2139150_+	MFS transporter	NA	NA	NA	NA
WP_024501234.1\|2139521_2141003_+	glucose-6-phosphate dehydrogenase	M4SIY3	Cyanophage	3.1e-72	36.9
WP_012391767.1\|2141187_2142627_+	NADP-dependent phosphogluconate dehydrogenase	E3SPS4	Prochlorococcus_phage	1.1e-29	30.2
WP_021350129.1\|2142881_2143355_-	universal stress protein	NA	NA	NA	NA
WP_021350128.1\|2143516_2143972_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_021350127.1\|2144130_2144898_+	glucose 1-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	5.6e-17	30.8
WP_024501235.1\|2144914_2145916_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_021350126.1\|2146187_2147996_-	oligoendopeptidase F	NA	NA	NA	NA
WP_014562721.1\|2147998_2149291_-	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA
WP_021350125.1\|2149538_2150210_+	membrane protein	NA	NA	NA	NA
WP_023467458.1\|2151865_2153545_+	D-lactate dehydrogenase	NA	NA	NA	NA
WP_004562986.1\|2154127_2154787_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	8.1e-41	43.3
WP_042513953.1\|2156246_2157467_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.6e-90	44.5
WP_187343256.1\|2159274_2160261_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	4.0e-44	36.3
WP_086031833.1\|2160441_2161728_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_102116229.1\|2162032_2162467_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_021353998.1\|2162680_2163658_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_042513953.1\|2164266_2165487_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.6e-90	44.5
WP_035437573.1\|2165751_2166048_-	hypothetical protein	NA	NA	NA	NA
WP_003688746.1\|2166066_2166231_-	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_035437571.1\|2166283_2168479_-	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	4.0e-60	30.1
WP_035437569.1\|2168729_2169161_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA
WP_012391781.1\|2170656_2171328_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.0e-30	36.4
WP_003685525.1\|2171332_2172379_-	ABC transporter permease	NA	NA	NA	NA
WP_080965022.1\|2173089_2173524_+\|transposase	transposase	NA	NA	NA	NA
WP_086031834.1\|2173724_2174633_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.9e-11	29.6
WP_035436770.1\|2174888_2176832_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_021349353.1\|2176907_2179130_+	alpha-galactosidase	NA	NA	NA	NA
WP_012391784.1\|2179344_2180346_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	9.9e-06	22.8
WP_035436767.1\|2180373_2181828_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA
WP_021350297.1\|2181855_2183022_-	galactokinase	NA	NA	NA	NA
WP_012391787.1\|2183193_2184144_+	hypothetical protein	NA	NA	NA	NA
WP_035436764.1\|2184149_2184938_+	tyrosine-protein phosphatase	NA	NA	NA	NA
WP_021350299.1\|2184956_2185469_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_035436761.1\|2185481_2185706_+	hypothetical protein	NA	NA	NA	NA
WP_021816648.1\|2185821_2186556_-	amino acid ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	1.9e-14	27.6
WP_035436758.1\|2186557_2187247_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003685553.1\|2187349_2188150_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003682214.1\|2188288_2188615_-	hypothetical protein	NA	NA	NA	NA
WP_035436755.1\|2188716_2189655_+	phosphoglycerate dehydrogenase	A0A2R8FDS8	Brazilian_cedratvirus	5.4e-30	33.2
WP_035436752.1\|2189656_2190139_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_003682221.1\|2190355_2191150_+	nicotinamide mononucleotide transporter	A0A0C5K6M3	Enterococcus_phage	5.8e-25	33.1
WP_035436749.1\|2191256_2191766_-	O-acetyl-ADP-ribose deacetylase	A0A0K1L687	Scale_drop_disease_virus	7.2e-37	49.4
WP_021353558.1\|2191774_2193679_-	peptidase M13	E3T4I7	Cafeteria_roenbergensis_virus	3.4e-71	29.8
WP_187343258.1\|2193938_2195240_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	3.0e-47	34.0
WP_003682227.1\|2195345_2195639_-	hypothetical protein	NA	NA	NA	NA
WP_035436742.1\|2195631_2196792_-	hypothetical protein	NA	NA	NA	NA
WP_003682231.1\|2196784_2197927_-	AAA family ATPase	A0A141HRX4	Bacillus_phage	1.7e-22	31.1
WP_003682233.1\|2197928_2198558_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_003682235.1\|2198617_2198986_+	DUF488 family protein	NA	NA	NA	NA
WP_012391797.1\|2199276_2199462_-	hypothetical protein	NA	NA	NA	NA
WP_003685576.1\|2199462_2200137_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_021349314.1\|2200139_2200463_-	hypothetical protein	NA	NA	NA	NA
WP_003682248.1\|2200556_2201183_+	NAD(P)H-hydrate epimerase	NA	NA	NA	NA
WP_003682249.1\|2201363_2201921_-	elongation factor P	NA	NA	NA	NA
WP_021349677.1\|2202067_2202700_-	hypothetical protein	NA	NA	NA	NA
WP_003682253.1\|2202836_2203070_+	hypothetical protein	NA	NA	NA	NA
WP_003682254.1\|2203116_2204064_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_086031836.1\|2204492_2206556_+	LysM peptidoglycan-binding domain-containing protein	A0A0A7RUS8	Clostridium_phage	1.4e-27	49.0
WP_003682256.1\|2206674_2206995_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_054173696.1\|2207337_2208588_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.4e-57	37.3
WP_015638507.1\|2208661_2209117_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	9.5e-33	50.7
WP_003685587.1\|2209182_2209641_-	arginine repressor	NA	NA	NA	NA
WP_035437714.1\|2209802_2210495_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.5e-33	36.8
WP_086031837.1\|2210507_2211569_-	ABC transporter permease	NA	NA	NA	NA
WP_035437716.1\|2211492_2212095_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_046948259.1\|2213493_2214417_-\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	5.1e-33	31.9
WP_086031838.1\|2215327_2215792_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	7.0e-31	50.4
WP_086031839.1\|2215802_2216990_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.6e-37	29.1
WP_086031754.1\|2217281_2218568_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_046948626.1\|2218695_2220288_-	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_035436809.1\|2220730_2221489_+	hypothetical protein	NA	NA	NA	NA
WP_035436813.1\|2221804_2223610_+\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	3.7e-88	34.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP021104

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection