CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018790	Campylobacter sp. RM6137 plasmid pSUIS6137, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP018789	Campylobacter sp. RM6137 chromosome, complete genome	5 crisprs	cas2,cas1,cas9,cas4,DEDDh	0	2	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018789_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018789_1

385699-385957

TypeII

Consensus_repeat	Method
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTT	PILER-CR
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTT	CRISPRCasFinder
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTT	CRT

3 spacers

cas9,cas1,cas2,cas4

The CRISPR arrays of NZ_CP018789_1

>merge|NZ_CP018789|1|385699-385957|PILER-CR,CRISPRCasFinder,CRT
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTTTTAAGAGTATTAAGATACCTTTTTAAGAGTATTAGTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTTGAGCCGTAAAAAGAGCTAGTAACCCAGCAGTTTTAGTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTTATCTATTCCCATCATTAAGAAGCAACACAAGACCGTTGCAAATTATACCACAAACCAACCCCAAAAAGCCATC

>NZ_CP018789|1|1|385699-385884|PILER-CR
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTT	TTAAGAGTATTAAGATACCTTTTTAAGAGTATTA
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTT	GAGCCGTAAAAAGAGCTAGTAACCCAGCAGTTTTA
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTT

>NZ_CP018789|1|1|385699-385884|CRISPRCasFinder
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTT	TTAAGAGTATTAAGATACCTTTTTAAGAGTATTA
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTT	GAGCCGTAAAAAGAGCTAGTAACCCAGCAGTTTTA
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTT

>NZ_CP018789|1|1|385699-385957|CRT
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTT	TTAAGAGTATTAAGATACCTTTTTAAGAGTATTA
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTT	GAGCCGTAAAAAGAGCTAGTAACCCAGCAGTTTTA
GTTGCAAATTATACCATAAACCAACTCGGTTTGAAACTT	ATCTATTCCCATCATTAAGAAGCAACACAAGACC
GTTGCAAATTATACCACAAACCAACCCCAAAAAGCCATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018789.1\|WP_086296879.1\|377201_378020_+\|enoyl-ACP-reductase-FabI	unknown	unknown	gnl\|CDD\|181416
NZ_CP018789.1\|WP_086296883.1\|380390_380660_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_CP018789.1\|WP_086296877.1\|374325_375321_+\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223135
NZ_CP018789.1\|WP_086296884.1\|381597_385419_-\|hypothetical-protein	cas9	cd09704_cas9_CAS-II-B	gnl\|CDD\|274401
NZ_CP018789.1\|WP_086296880.1\|378333_378804_+\|ComF-family-protein	unknown	unknown	gnl\|CDD\|223970
NZ_CP018789.1\|WP_086237752.1\|380660_381617_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
NZ_CP018789.1\|WP_086296890.1\|390732_391479_-\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NZ_CP018789.1\|WP_086296888.1\|389001_389904_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086242200.1\|391471_392653_-\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
NZ_CP018789.1\|WP_086296892.1\|393260_394358_-\|DNA-adenine-methylase	unknown	unknown	gnl\|CDD\|225927
NZ_CP018789.1\|WP_086296886.1\|386191_387784_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|237894
NZ_CP018789.1\|WP_086296882.1\|379823_380390_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP018789.1\|WP_086296881.1\|378800_379574_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086296891.1\|392649_393261_-\|phosphoribosylanthranilate-isomerase	unknown	unknown	gnl\|CDD\|238237
NZ_CP018789.1\|WP_086296878.1\|376527_377199_+\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
NZ_CP018789.1\|WP_086296885.1\|385991_386195_-\|sulfur-carrier-protein-ThiS	unknown	unknown	gnl\|CDD\|340451
NZ_CP018789.1\|WP_086237746.1\|389900_390206_-\|flagellar-motor-switch-protein-FliN	unknown	unknown	gnl\|CDD\|181423
NZ_CP018789.1\|WP_086296887.1\|387793_388981_-\|tetrahydrodipicolinate-N-succinyltransferase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|274635
NZ_CP018789.1\|WP_086237760.1\|375322_376531_+\|phosphoglycerate-kinase	unknown	unknown	gnl\|CDD\|234613
NZ_CP018789.1\|WP_086296889.1\|390202_390622_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|379336

Protein	Function_ID	Function_description	E-value
NZ_CP018789.1\|WP_086296879.1\|377201_378020_+\|enoyl-ACP-reductase-FabI	gnl\|CDD\|181416	PRK08415, PRK08415, enoyl-[acyl-carrier-protein] reductase FabI.	0
NZ_CP018789.1\|WP_086296883.1\|380390_380660_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	1.80635e-10
NZ_CP018789.1\|WP_086296884.1\|381597_385419_-\|hypothetical-protein	gnl\|CDD\|274401	TIGR03031, cas_csx12, CRISPR system subtype II-B RNA-guided endonuclease Cas9/Csx12. Members of this family of CRISPR-associated (cas) protein are found, so far, in CRISPR/cas loci in Wolinella succinogenes DSM 1740, Legionella pneumophila str. Paris, and Francisella tularensis, where the last probably is an example of a degenerate CRISPR locus, having neither repeats nor a functional Cas1. The characteristic repeat length is 37 base pairs and period is about 72. One region of this large protein shows sequence similarity to pfam01844, HNH endonuclease.	1.68962e-46
NZ_CP018789.1\|WP_086296880.1\|378333_378804_+\|ComF-family-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	3.16982e-18
NZ_CP018789.1\|WP_086237752.1\|380660_381617_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.3064e-62
NZ_CP018789.1\|WP_086296890.1\|390732_391479_-\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	1.77469e-105
NZ_CP018789.1\|WP_086242200.1\|391471_392653_-\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NZ_CP018789.1\|WP_086296892.1\|393260_394358_-\|DNA-adenine-methylase	gnl\|CDD\|225927	COG3392, COG3392, Adenine-specific DNA methylase [DNA replication, recombination, and repair].	9.92994e-79
NZ_CP018789.1\|WP_086296886.1\|386191_387784_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
NZ_CP018789.1\|WP_086296882.1\|379823_380390_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.0604e-14
NZ_CP018789.1\|WP_086296877.1\|374325_375321_+\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	8.81088e-158
NZ_CP018789.1\|WP_086296891.1\|392649_393261_-\|phosphoribosylanthranilate-isomerase	gnl\|CDD\|238237	cd00405, PRAI, Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP). Most PRAIs are monomeric, monofunctional and thermolabile, but in some thermophile organisms PRAI is dimeric for reasons of stability and in others it is fused to other components of the tryptophan biosynthesis pathway to form multifunctional enzymes.	2.88359e-53
NZ_CP018789.1\|WP_086296878.1\|376527_377199_+\|triose-phosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	8.12006e-85
NZ_CP018789.1\|WP_086296885.1\|385991_386195_-\|sulfur-carrier-protein-ThiS	gnl\|CDD\|340451	cd00565, Ubl_ThiS, ubiquitin-like (Ubl) domain found in sulfur carrier protein ThiS. ThiS, also termed Thiamine biosynthesis protein (ThiaminS), is a sulfur carrier protein involved in thiamin biosynthesis in prokaryotes. It has the beta-grasp ubiquitin-like (Ubl) fold with low sequence similarity to ubiquitin (Ub), and is activated in an ATP-dependent manner by sulfurtransferases, similar to the activation mechanism of Ub-activating enzyme E1. ThiS has common evolutionary origin with Ub-related protein modifiers in eukaryotes, a beta-grasp fold as Ub, and is closely related to proteins MoaD and Urm1.	1.70426e-18
NZ_CP018789.1\|WP_086237746.1\|389900_390206_-\|flagellar-motor-switch-protein-FliN	gnl\|CDD\|181423	PRK08433, PRK08433, flagellar motor switch protein FliN.	4.6509e-52
NZ_CP018789.1\|WP_086296887.1\|387793_388981_-\|tetrahydrodipicolinate-N-succinyltransferase-N-terminal-domain-containing-protein	gnl\|CDD\|274635	TIGR03535, DapD_actino, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. This enzyme is part of the diaminopimelate pathway of lysine biosynthesis. This model represents a clade of the enzyme specific to Actinobacteria. Alternate name: tetrahydrodipicolinate N-succinyltransferase.	1.66475e-82
NZ_CP018789.1\|WP_086237760.1\|375322_376531_+\|phosphoglycerate-kinase	gnl\|CDD\|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_CP018789.1\|WP_086296889.1\|390202_390622_-\|restriction-endonuclease	gnl\|CDD\|379336	pfam13690, CheX, Chemotaxis phosphatase CheX. CheX is very closely related to the CheC chemotaxis phosphatase, but it dimerizes in a different way, via a continuous beta sheet between the subunits. CheC and CheX both dephosphorylate CheY, although CheC requires binding of CheD to achieve the activity of CheX. The ability of bacteria to modulate their swimming behaviour in the presence of external chemicals (nutrients and repellents) is one of the most rudimentary behavioural responses known, but the the individual components are very sensitively tuned.	0.00949563

>NZ_CP018789.1|WP_086296884.1|381597_385419_-|hypothetical-protein
MRELSINVDMGAANNGVFIVNTDEDSILYKKAFNLYFDKQLQFSKSDRTARRHTRRSYDRDRFILRLIGEILPIKMLNKEQIEMIYGLFKNRGFNYHNIEFDENLDDEVAEFLSKLDGYIFGASKSKDEFEKILNEVVVDHSNSEILEILDTQSCILNSIDKSNKNVLKASKSIFSLIQSIRNEISKNNKHRTSYLKDIKDIINNKCEFITQKSDKFDNLNEFYNFVGNISNLQTRVLRRYFNSKFNAEFDDEKLKINLIRNINYMEYIDKKSDKEKMLNTLNQKSALEYLKSIDPIITIPPYENRKNKNPQKCNTLQINSDKITANLLSATYKILKSDDFVHILRDENGQIASVIKDCDIAKYLQRILDVSKDSLMDTSLYPRTLDNNPKIFADTFRLNSDELREFKDFAKRYYDEVDNAKKGIISANLLIPCGKNTPHKNGNKSELVSALFGRHITNDDLVNLEKFMLENKIKGNKSYKGFFEDLNQLKKSYQNGFYHKLNSDEIGDKDIKSILELYPKVIQNISNHNQIFEFKTPLDQNNLNTNINYLSQLGEIIYDEKNRGFLKTCKCHTLENLIRSGSKTAICTRLPSNSARLINGKIEMYLNRLAYEISTAIETESLKDIKRININVEMNKFSFENNAYDLKLISKRQKPKDLICPYSGQKIDLTNCEYDHILPRSKALYNSKANLICSSSTANLQKGNQNYTLENLHQDYLESIYKIIKIKNLDEFKHFIDDKIKNIDINKFTNYDNLNSFEQIALRHALFYKGSNSFNKALEILKLDRIKTHSNGTQKRFVNILIQKIKDRLAKLNLSSDIEFSVNFINAELVSAIRNELSKEDKELQKAKIQDSHSHCIDASIVFYYANSKLINNSKGQREFKYDYNHIRPEYSNKITMQSKKYLELNSNKIARKKLFDDGVYSLVYENTNILKDKEFNILLDLGLLHTKENGKKVAITSDFKSGKFYISTHKVFDLLFKAFNDGDIKLLNKLKFLDNHLSFYIRKDIFAIIKDKDKSSMFFTNENKLKTPDEKIKTKNIDKFYHILQANESKIIEIKDGKNILKHQEIKELFKECFYTKQAKRSRNRSRIIYSLPIKTSSKYIIRKNGGYAGLSNSDIATKTYIDLDNKNIIKIPFFSKNILPCKIADIINIIKLKSKNIKQIYKLPITKNLPSAITKLEFIISQANRHDIEVEFDKSQIGDYNLLDQTSRDEFIDKYLNGEFKELLGEPRDKKITIIKDTKDSLIIAYCVKQTSAINKKIMIDNLIDETSSS
>NZ_CP018789.1|WP_086237752.1|380660_381617_-|CRISPR-associated-endonuclease-Cas1
MKHLVLNSFGLFLGLKSQRIIIYQNKEIIKEIALKTLKTISINSNGITISSDLIFACSMRGIKIFFQNFNTFSATHALYEHKGVNILKQQFASKENAKGLSLAKELIIGKIKNQRSTILYFSRNQEFRSKDITIQSLDKAINMLRNLQIKDINEIFTIEANAASRYFDFLKLNSFLPDSFEHRTKKESTEITNQALNYGYAILLNIVYKSIINAGLNPYFGVLHTMRSSKPSLALDIMEEYRSFVVDRNIIKIRSLLKGEFNMQIKKLVASNILNSLNKKLIYNHKKLTLESIIQRQIYKISAYFCGDTRYKSYIFRW
>NZ_CP018789.1|WP_086296883.1|380390_380660_-|CRISPR-associated-endonuclease-Cas2
MRYLICYDIEDNKNRTKLFERLKDFNLLPVQKSVFYGELSKADKIAIKALLHRHCSKSDKAIITSVNLDIDDTLGYSKEYFKSKSYEII
>NZ_CP018789.1|WP_086296882.1|379823_380390_-|CRISPR-associated-protein-Cas4
MILISHIRQFIFCPRILYFYTFCDIKPLYPEYVSLGTQYHNRQNELFKSRKFLKFKLPIIKVYNNLYLQDLSMSGIADLVIECKDEIIVAEYKNQNKPILSTGAKMQLIAYSILASKYLNKPFSKIMLICSNNLKFKIFDITNDDLIKFDKVINSIKKMIDQEIFPHSNASIAACIQCEFKNYCDDRE
>NZ_CP018789.1|WP_086296881.1|378800_379574_+|hypothetical-protein
MNNEKVFISGSISIKKLPDIAKETLDKIIYNNFEILVGDAAGIDTLIQEYCNRKNYDNITVCYIGDEPRNLVDPDFKTKKVNIQEQDKTEIEKLTRKDIKMTEYCTYSFVIWDEKSSGSYENIMRALNAKKFVKVCLTKSQKYCNSKEDNFKNNIENIYTENTGIKKEKFIELLRQSNPDNPNLKNTKKFNEFLVKNKIVKKDENDKYIPADEYKKYFIEKRSKGKFVSYNFTNKLYATIEELIKKDHPIQNSFDNF
>NZ_CP018789.1|WP_086296880.1|378333_378804_+|ComF-family-protein
MIYDLKYNNLISLDDKIKLAEKLATIAVDFLNSKIMVAPYIWVIVPAPASKDREIQPLYLLADRVAYLLNKAIDFDYIKKIKNTDELKSIDDPDERARILKDAFRCDKRYKNKKILLIDDLFRSGATLNEITKTLYTQGEVNNVYALCFTKTRSKR
>NZ_CP018789.1|WP_086296879.1|377201_378020_+|enoyl-ACP-reductase-FabI
MILEGKKGLIVGVANKMSIAYGIAKACKDQGANLAFTFLNDAIKKRVEPIAAELENPYLYELDVNNQSHLDTLADKIKSDFGEIDFIVHAVAYAPKEALEGEFIDTSKEAFDVAMSTSVYSLISLTRAVLPVLKEGGSILTLSYLGGAKFVPHYNVMGVAKAALESSVRYLAHDLGAKNIRVNAISAGPIKTLAASGIGDFKMILHWNECNAPLKRNVSIDDVGKSGMYLLSDLASGVTGEIHYVDAGYNIMGMGDVAVDQNGATILAWDKK
>NZ_CP018789.1|WP_086296878.1|376527_377199_+|triose-phosphate-isomerase
MIYAANLKCNYTRSGFLEYARVLDRNISDQSVMVFPPSSAFLETKFKFTQGAQNFYPAKSGSFTGEIGSDMLDEFGITTVLIGHSERRALGEDEPFLKAKFDFAKQNGWDIIYCIGEDDITHMNGSTKEFLCDQLENIDLEYENLVVAYEPIWAIGTGKSAKAEFIAEILDFISTKTTAPLLYGGSVNIANIDDIKAIKNCDGVLIGTASWDANKFLEIIKKD
>NZ_CP018789.1|WP_086237760.1|375322_376531_+|phosphoglycerate-kinase
MSEIISIKDIDFKSGSKVLVRCDFNTPMDEFNNITDDRRIRSVIPTIRYILDQGCSVILASHLGRPKNGYEEKYSLLPVAKRLGRLMDREIKFAHDVIGHDAKEKVEKLQAGEILLLENLRFEKGETKDDANLAKSLSELADYFINDAFGVCHRAHSSVHSITNYFDNEHKAAGFLLIKEIEFGQNLIRHPSRPFVAVTGGSKVSGKLQALTNLLPRIDKLIIGGGMAFTFLKALGENIGNSLLEEELVEEAANILKKGRELGVKIYLPVDVVAAQSFSNDSAIKYVPVQEIPNGWMGLDIGPASVKLFKEAIADAQTIWWNGPMGVFEMDKFSKGSIKMSHAIGESFATTVVGGGDTADVVERAGDTDEMTFISTGGGASLELIEGKELPGVRVLLREDGL
>NZ_CP018789.1|WP_086296877.1|374325_375321_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MALKIAINGFGRIGRCAARIILNNPAEYELSIINDTAERKMTRYLLKYDTVHGEFNQDVEVLNDDYIAINGKKIRVYSTRDINDMDLSGIDVVLECTGKFLTKEKCQAYIARGAKKVVMSAPAKDDTPTFVLGVNSDKYEGQTIISNASCTTNCLGPVTRVLEDLYGIKKGLMTTIHAYTNGQSLVDVKCRDFRRSRAAAVNMIPTSTGAAKAMKLVMPSLDGKLHGQSVRVPVPNVSIVDLTAVLEKNVTKDELNSAFVEASKGSLKGIMAVDFDERVSGDFITSSYSSIVAADLTQVICGDMIKVMAWYDNEWGYSNRLVEMAKFISEK
>NZ_CP018789.1|WP_086296885.1|385991_386195_-|sulfur-carrier-protein-ThiS
MIQIWLNSNLISIDDGSNLAKLIKLQGYEESRVAVEVDMQIVPRSAWGEFSIKDGMKIEIVEFVGGG
>NZ_CP018789.1|WP_086296886.1|386191_387784_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MVEIKGLTHRFGSQLLFEDVNLKLNSHNRYGLIGANGAGKSTFLKILSGQIEHTSGEIIIESNKKIGVLGQDQFAFEDFTLKDAVLWGNKRLYDAIKEKEKLYLSEEFTDEINERLSELEIISAEEDPTYEYETRIEKILSSLGLHEYDKLMSQIESSDKVKVLLAQVLFPRPDILFLDEPTNNLDIDAIAWLERELINHEGTLVVISHDRHFLNRVCTHILDVDFRQIREFSGNYDDWYIAANLVAKQAQMERDKKLKEREELEKFIARFSANASKAKQATSRAKQLEKLQINEIKTSSRRDPSILFRTNRDIGNELIELISVSKKFDENVILDNFNFKMNKGDKVAIIGTNGVGKSTLCKIIMGQLEASSGNVRIGATIELGYFAQDSSSKITGNLKLYEWLQDSKNKDLDEIRKCLGRMLFSGTEQEKEVGSLSGGEKHRLMLSKLMLQRANLLILDEPNNHLDLEAIIALGEALYNFSGSCICVSHDRELIDAFANRILHLKGNAEIVDFKGTYEEYRAYCGLDEK
>NZ_CP018789.1|WP_086296887.1|387793_388981_-|tetrahydrodipicolinate-N-succinyltransferase-N-terminal-domain-containing-protein
MSIKNLDELKKFTGEIRSKAGYKDPMAFAIGRSIKGKSGKTISVNYAVVNMNENYASAAILSWAIEKNGIKIDNSTSEFVAPISSAIIADALGIFDFLINECEGDKHKNIQNLLVIDEILNDDEMDNDAEFVVTFLYSDEAPKSVEAVYLKLYLLSLNKAEIRSLNLNGAFGLLPNLAWDSDGNPHELDHLRENEIWLKMKGWYPNIISVDKFPRYLNHIIPSDNTRILDSSKVRMGAVLAPGTTIMPGASYVNFNSGTTGAVMVEGRISSSVKVGDGSDIGGGASILGVLSGTNGNPISIGKRCLLGANSVTGVPLGDDCIVDAGIAILEGTKVYINDKEALKKVNPEFEFDKDIYKALELANLNGIHYRQNSQTGQITANISKRAIKLNSDLH
>NZ_CP018789.1|WP_086296888.1|389001_389904_-|hypothetical-protein
MKIWLLIALALPLWAVNLLTHNIYQRDERIDIMLSFDAPYNGTIKQQNNPQTINIILSDVNTKDKINKEIKSNILQNINISSINNATTLELKSQKPISIIASKTSDKFGLRIRITPKANQPQNSVKNTPKEQPSLSNIPTKKDNQDSLYTNYIIVILVLFAMFVFAMYIKTKYAKKNLKSTKSNKVDQTAKIEPFELSTPKNSLNQSGNLSRNLDNESVDIIYEKPLDTQNKVVLLNYENQKYLVLVGSSNVLLDKFGEEKIKTKDDFELFFEENKQKLSGYLQERKNAISRYKDMMDKE
>NZ_CP018789.1|WP_086237746.1|389900_390206_-|flagellar-motor-switch-protein-FliN
MNDEGLSPNGLFHGYDELLDIGVEFISDLGMTTISVRELLKLEVGSVIDLEKPAGESVELFINNRIFGKGEVMVYEKNLAIRINEILDSKSVIQYFKREQL
>NZ_CP018789.1|WP_086296889.1|390202_390622_-|restriction-endonuclease
MLNAINYATKHFCTDIFGYKLEEGKSLGKDLYGASIPIYKDGEEIQFYLYFKKETLELFVDKLFNKEEGKKTDLGDLSREVANQIVGYAKNLLNDNNNGTYKLGTPEFLGKVERFPVRLEKSQIFKMKNKTFKIGYKKA
>NZ_CP018789.1|WP_086296890.1|390732_391479_-|tryptophan-synthase-subunit-alpha
MDKIQKAFNDKKANIGYIVAGYPNLEYTKEFLNLLDESCLDILEIGIPYSDPLADGKLIANAAFEACQNGVTTNSVFDILKEIKTKKALVFLVYYNIILSYGEDRFLQDSKECGISGILVPDMPYEESKEFASKCQKHGISLIRLIAPTSANRSKEIASNADGFIYAVGSLGVTGGEQSSIDRLKDMIKSIKDSSKLPVAIGFGVKNSQDVKAIKEYADGAIIGTKIVEITSKFDPQTAHKKIKELFE
>NZ_CP018789.1|WP_086242200.1|391471_392653_-|tryptophan-synthase-subunit-beta
MNAKAYFGKYGGQFVPETVMSALMELEEAYEKIAKSDEFKSELNALLKDYVGRPSPMYHAKRLSEHYGHNIYLKREDLNHTGAHKINNALAQALLAKKMGKTKVLAETGAGQHGVATATAAALLGLECDVYMGQCDTKRQALNVYKMQLLGANVVPISDGLGTLKEATTAAIQAWVNEIESRFYVIGSAVGPHPYPMIVRDFQSVIGSEAKAQLDEKGVKPDYIIACVGGGSNAIGIFSAFLDDPSVNIIGVEAAGLGIETKYHAATLTKGTKGIIHGMKTIVLQDEFGMILPVHSISAGLDYPGVGPEHAHLQDIGRVSYYAVSDDECVNALRLLSRLEGIIPAIESSHALAYLDKLCPTLNKRSNIVVNVSGRGDKDMNTIMEYKKGTIYG
>NZ_CP018789.1|WP_086296891.1|392649_393261_-|phosphoribosylanthranilate-isomerase
MSPLIKICGIKTLSEAKSVCECEFKGKRVDFIGLIFAESKRKISKEMAKNIADLAHKFGIKAVGVFAKIPFDEVAKIVKFADLDTIQIYEKVDDKTKFDCEVWQVFSVGESLPKPEGSYDKILFDTKGDKIGGNGVKFNWDLLKNLDIKFGLAGGIGVENLKEAIKLKPNLIDINSKIEDEFGIKDSDKVMEILKIVSLGDLK
>NZ_CP018789.1|WP_086296892.1|393260_394358_-|DNA-adenine-methylase
MSENTEYLTNQLISYLGNKRSLLGSIDSVVCDIKKELRKDKIAFADVFSGSGVVARLAKKHSNLILANDLEKYSFVINSCYLENSDNELISSLKQIHDKILQNYTPQESFISEIYAPKDDKNIQKGERAFYSRQNALILGGLRDEISKIPTEFQKYFIAPLLSQASIHSNTGGVFKGFYKDKDGIGKFGGSGENALKRILGKIELEMPIFSNFKSEFKVFQNDAYEFAKLAPSVDIAYFDPPYNQHPYGSNYFMLNLICDFKAPNIEQISKVSGIPNDWNRSNYNKKAKAGSEFFTLLSEFKAKYLIISFNSDGFIKESEFLTNLNKIGKVEKVKIKYPTYRASRNLNSRDLYVTEYLYIVKKVI

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP018789_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018789_2

529323-529434

Orphan

Consensus_repeat	Method
GGTTACACTTATTTTCAAAAAGTGTAACCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018789_2

>merge|NZ_CP018789|2|529323-529434|CRISPRCasFinder
GGTTACACTTATTTTCAAAAAGTGTAACCTTGGGCTAAGTGCCTTTTTATGGCTATTTGGTGGCTTAAGGTTTCTAAGCTCGGTTACACTTATTTTCAAAAAGTGTAACCTT

>NZ_CP018789|2|2|529323-529434|CRISPRCasFinder
GGTTACACTTATTTTCAAAAAGTGTAACCTT	GGGCTAAGTGCCTTTTTATGGCTATTTGGTGGCTTAAGGTTTCTAAGCTC
GGTTACACTTATTTTCAAAAAGTGTAACCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018789.1\|WP_086297016.1\|540915_541224_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297003.1\|526570_526939_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_180380826.1\|528425_528593_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297014.1\|536661_539196_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376231
NZ_CP018789.1\|WP_086297007.1\|529844_532709_-\|toprim-domain-containing-protein	unknown	unknown	gnl\|CDD\|225913
NZ_CP018789.1\|WP_086297006.1\|528604_529282_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297005.1\|527934_528414_-\|DUF736-family-protein	unknown	unknown	gnl\|CDD\|368371
NZ_CP018789.1\|WP_192940207.1\|527146_527320_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297010.1\|533880_535548_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297002.1\|526337_526574_-\|DUF3310-domain-containing-protein	unknown	unknown	gnl\|CDD\|371705
NZ_CP018789.1\|WP_086297004.1\|527312_527924_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297011.1\|535563_535827_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297008.1\|532708_533083_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297001.1\|526133_526337_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP018789.1\|WP_086297000.1\|525107_525626_-\|SocA-family-protein	unknown	unknown	gnl\|CDD\|379096
NZ_CP018789.1\|WP_180381038.1\|526935_527106_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297018.1\|541198_541726_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297013.1\|536086_536608_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297009.1\|533428_533812_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_192940208.1\|539314_540565_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376228

Protein	Function_ID	Function_description	E-value
NZ_CP018789.1\|WP_192940208.1\|539314_540565_+\|hypothetical-protein	gnl\|CDD\|376228	pfam18809, PBECR1, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1. A predicted endoRNase of the Barnase-EndoU-ColicinE5/D-RelE like nuclease fold found in polyvalent proteins of phages and conjugative elements. The predicted active site contains a conserved histidine and threonine residues.	1.71423e-24
NZ_CP018789.1\|WP_086297007.1\|529844_532709_-\|toprim-domain-containing-protein	gnl\|CDD\|225913	COG3378, COG3378, Phage associated DNA primase [General function prediction only].	3.83229e-45
NZ_CP018789.1\|WP_086297001.1\|526133_526337_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	8.81476e-06
NZ_CP018789.1\|WP_086297000.1\|525107_525626_-\|SocA-family-protein	gnl\|CDD\|379096	pfam13274, DUF4065, Protein of unknown function (DUF4065). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and viruses. Proteins in this family are typically between 155 and 202 amino acids in length.	2.81414e-13
NZ_CP018789.1\|WP_086297005.1\|527934_528414_-\|DUF736-family-protein	gnl\|CDD\|368371	pfam05284, DUF736, Protein of unknown function (DUF736). This family consists of several uncharacterized bacterial proteins of unknown function.	3.38337e-07
NZ_CP018789.1\|WP_086297014.1\|536661_539196_+\|hypothetical-protein	gnl\|CDD\|376231	pfam18812, PBECR3, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3. A predicted endoRNase of the Barnase-EndoU-ColicinE5/D-RelE like nuclease fold found in polyvalent proteins of phages and conjugative elements. The predicted active site contains a conserved histidine and threonine residues.	1.62143e-17
NZ_CP018789.1\|WP_086297002.1\|526337_526574_-\|DUF3310-domain-containing-protein	gnl\|CDD\|371705	pfam11753, DUF3310, Protein of unknwon function (DUF3310). This is a family of conserved bacteriophage proteins of unknown function.	1.67139e-22

>NZ_CP018789.1|WP_086297006.1|528604_529282_-|hypothetical-protein
MKQINDVVTFYDEDGNLIGVSQKNQRDEILNTDEELKTLKSDELPPIDIMNEEQKKAYELWITSATLENDFTPITERKLAQSLAEHGISASNSRINRWKQKFGWAKLLEHKINLAMINNESLNRTIKHTALGAAVENTKVDLERNTALLGTAYSIAEIELKELYHKRQNGSLSKDEFKRFEALFKIIADRDDRMNDRLAHIATEAVSSVEVFERLNQISLDIETE
>NZ_CP018789.1|WP_180380826.1|528425_528593_-|hypothetical-protein
MNPLKLFKPLLTPKVTTKPYILGADGIKYSTKFYIVMMDAIYTRRGGKLITRVSR
>NZ_CP018789.1|WP_086297005.1|527934_528414_-|DUF736-family-protein
MKIGYITQKSFTKDSETITYLSGSMQVLGIANMLEFTITESNSDNPNSPTYYIKLPRLKSNLANNIIIGSLWLRTSQSGNEYMSGYIDSPIFSGGRIEIICFKPYADDNPAILWNIIWEPAKKQKEQTTQTAVPDLEPTQPKVTPKDLHSGVADDSIPF
>NZ_CP018789.1|WP_086297004.1|527312_527924_-|hypothetical-protein
MKIDLNEIYKGLKAWRHERGITADSQKEGYLVNVMEELGELASALREYERFSKPSYPYPKNKKYAEHGIIDALCDISVFTINAGADIPCDFKTTQIQPNANYSINAELNFLIERITHFNKAIIFGDYPKDTAIYFNSILDKCADICEQYGFDFQIAMDETIKEINSRTGSYDKASKKWVKDESDEAKSKWYKADYEKARIKND
>NZ_CP018789.1|WP_192940207.1|527146_527320_-|hypothetical-protein
MIKKEFAVLLAEKACDEVAKMGFYPVSPLLLWAGRISEKKQRRARASRAKNYTKRFA
>NZ_CP018789.1|WP_180381038.1|526935_527106_-|hypothetical-protein
MFIDAELRLIHAIALNKKAIEYIKTNFPKSNKRDKRIKAHKILIKRYKLALKDLQL
>NZ_CP018789.1|WP_086297003.1|526570_526939_-|hypothetical-protein
MMPHQVRTNTKLAIILNRYRGDEFTAMWKAKAKVVSKHTQRMRIMWERLSEGDATLPLFDNDYEPKSIAELFTPELPQSIETEQPKEQTKNRHNKSTPTIQELKELFWAEELRNPPRQRRKQ
>NZ_CP018789.1|WP_086297002.1|526337_526574_-|DUF3310-domain-containing-protein
MNKINHPPHYGGDNPYETIKVLGAWLSIEEFKGFCKGNVIKYLSRAGKKDDELEDLQKARWYCDKLIELHKFRSLKGL
>NZ_CP018789.1|WP_086297001.1|526133_526337_-|helix-turn-helix-domain-containing-protein
MKEKYITIKEAIKLLNVSRSTLWHWDKINYLKAYHIGKSVVYKTADIDNLATKAKPKTLNAYKRHKI
>NZ_CP018789.1|WP_086297000.1|525107_525626_-|SocA-family-protein
MKKHEAIIAYIVKHFRESGVVKTKLLKLLWFAHREFMYAYSKNLSELKFIKLPHGPVPKIKEAQKTLDHEKILSKIIDDGILKLENRNGYDYFLCNIDIDVDKFFEPSEICILDETLYELENLSATKLSELSHDSQWNALNMGDTMLVESVFLRDVVEIPESELETLRAKYL
>NZ_CP018789.1|WP_086297007.1|529844_532709_-|toprim-domain-containing-protein
MQDNIFELLKTYSKEQLRDLMSSRGIIFKDFKYHCPFHGQDKTPSGSISFKKGSAFFNCFACGTGGDAGKFIELYEKLSPAKAAKVALNFIGFNFEESLSDEELEAKKEAFIKLQKEQEAARAKLEQEAEQKAQMVRAKLSKIAPNFLQQAKNLGALAEPFDIFIAKTDYFDYLFDRYIGFDPQNDSVAIVISNEQGEVINIKHRTKFKWDSEARCYSNERVSGKWIGASGASAYPFPIDFYNEFDSDIVVICEGEKDAINLCSLGVCALTLGGVNNSWQKHKELLRDKIVYIWFDNDKAGYTSAIARYKEIEAVAKSVYITLFYKLCPAAPAKYDISDYLGANQAKFTSSDKIIDKLIYSSFKLTNDLIDEIGELYECDLKEFKEPFKKVTFSDICKEIMQTDKDGNYLNIIPVKGELDDNQIDYFIKLFKSKELKDITAEVKSAMLENRLFITPQADKDLEQWAKVVDKICDFQKILRTNYHQTHLADMCDSFIKSVRKLGYDIAEYKGQIYFWNGNFYSFVDDREIYKFLLHHWMGASGVDKKKITDRTATELIDNIRGQGVLIDAKRKEPSLINKRVINLRNGSIIISKSGKIVFSQHHNKKLYATNMLDFDYNPEAKCPKWEKFLSQVMNDEDRLTLMEFIGYCFLPSHDYESFLFLYGKSGSNGKSVILDVLRSFFGEDNVSNLQLQQLEGHELHGLANKMLNIGSEIDKLGVDKGQFSNLKALVSPRDQIQINPKNQQPYSLKPEDKPKFAFAGNDKPKSNIDNAVFRRMLLIGFDKEIKDDEKIRGLSERFSDELDGIFALALKGLNRLVTNGKFTKGQKMQDALDEYKDEVNPTRVFIRDAIKPNKERFTPNKYLYLLYCEFAKERGNRPMSQTKFTQTLKDELAMSNIDFQVISRKSSIPKIGLASVERGFAGIEINTDFDITSVTINNMNLDIENMSEPCSVL
>NZ_CP018789.1|WP_086297008.1|532708_533083_-|hypothetical-protein
MSAFVSLDEAAAFHGISKLSLQKLKSSDKRLGRSDRFTEGGLVLLDFSNPLYEKTTYYYYKALAVAGNERALARAIAMSLGKSEHTIYSLFRRFKFKNQYTATKLIVALQSYIDSASLFDVKDL
>NZ_CP018789.1|WP_086297009.1|533428_533812_+|hypothetical-protein
MQDDKELIKEMKAFFKVNSLEDIAERLGYSRNSANNWRNNGLNSRVISKFEKAKADKKKDDEAFDELFFGGGIGGILVRYDREDNTQHNYTLSPELVDFILLYINYGNKALLDKFTQDLKQIQNLIK
>NZ_CP018789.1|WP_086297010.1|533880_535548_+|hypothetical-protein
MKKTKNRLFLIDDAFSKLENQKDRFLACERVYNATYDDAHRRRLAPQRSNIVERSRIYVPLAKTSIDILHSIFKSSFLGSGCPIEITRIGYNDDHDRALRDALTAAVKAKWRENKHFIGISRAVLSALYLPLGVVSVYWGDGDIQTKFIPINTIAFDPYASDINDVEYICYKFAKSRNDVKAKFKSGFYKSDDEYAVLKAGRRILIKEIYEKNWEKGGWDLTSYANDIEVRKAWFNQLPFCYGYCFENMPSVGREDLLNDDYIGVYGSCLPERVKELQQEYNIKRNQKIDLIENAIDPQFAINSEGGIVNANDLLSRKKVIRCNLSGDGDISKVVAPLLPTGSVYDVTTEIEMIKSEYEIASGVNSIMTGVTSASDRRSNTSLQTINAASGVRVESMFQSLAATMLHEYAKKYVKLLYKNLDDEYLIKITENPDIINIIGSKEERMSSDIDFDINVNFGTTISSDVVVSKINTLLGTLAQLGLNNPNLIMPLIKEMSVALLGENAPVYLIDEAFKELQAQQELAMATQAMKGEAMANDMAPQSDADKEAIIAGII
>NZ_CP018789.1|WP_086297011.1|535563_535827_+|hypothetical-protein
MWGNFLGGLADFGKNIFKDFKATDFLNAGGQILGGIGQYKAAKSQGKMARDTFNYNKALMEEERARRKKADDALAAGFRASDYAKEI
>NZ_CP018789.1|WP_086297013.1|536086_536608_+|hypothetical-protein
MGYYDRMLRTLQAPSTNGGVGTGLGLAAIGQALSNISKISDDRAKAIAEEDRANWERAYKDNEMAMAIEQNINNSAQRKFENDMAVKKLNLDEKATQAQINQMNTNAAIARDAHNLARLDNYTLTRLLQDFIQNGNVNSGLFAQYKFGVPINMDFMPSKGGVNIDKIGDIKID
>NZ_CP018789.1|WP_086297014.1|536661_539196_+|hypothetical-protein
MAEIYTVRSILGDESLQNLINQGRSQDEIISIAKAYKDEAIKSGDKDALNRMNLVSQKQGKADFFTRLGDKMDANGYETMGSIARGIDIVASKVAAPIASLVGDSDKEAQILADMKLTQSINEAKNLDKIATTARTQREYQIDSNNLLANAIGSYTKDSKTYARNLVEQAENSGYTAMDRFNIGMATTANATKYLIKSIIYGEDSKEANDIKDAQKILQASRDAYEANNPDKWNVANFAGEMVTDPLNAVGLAKGFKVANTAFKKGANVAFDLAQLGAIGGMAGAISEYGSHKDKDEQNVAGAAMMGAGAGVALGAGFMALGAVLNKIASRFGQKSTLEQNAQTAKDEAAKELEKGTPQDIDKRLQKISDDIEEAFSADENGENIARLLGQEYDDNINKAIKESEEVSTAIDDSVAKFANDNPKASASDIEIYINKTYAPSENEKELTRIINDDKPVTPRMAGYRVLGVLQKSMEYKTRFDRDTVVKRFKNHGFNDELANVFADAYIADDISVARRYLDSKVASNRQKSVEDGRNEWLENTTKSNKAKTPKNQDEILEEISSDKTQFKLIDDSDMTPELKSRLENDGYTLEREPESGVWEVSKGISDQEIKGSDEALENAVVKADKLDILDKSKPFRKAEKSELTDELMEEVIKNDSKLWIDNASDEVSKLVGLPNAKITLNGSAIKHTLQRHGENSVNVKNGEPPITLDDIKNHADIVNNADKRTFGVSDDGQKVLISAKQINGHFVVVETIGTKKRQLSFKTMYKVNGKLENNPLFKDSTASAKQIETAESSLSPKPSANLDSLSRANTKNSTPNEIKSQEPTQAEPNTNSRLEKNQEICRR
>NZ_CP018789.1|WP_192940208.1|539314_540565_+|hypothetical-protein
MANYITKEFLVKHDKEIKEIITQKTSGENRQIALNAFENLKENFDELRSVGIGDLVKPTAKGIKDKIAEIEIKSMSDKELVTQFQKLKDSKARVNENLYKYLENEIKKREKKLYPFINSDKKDYSYDLEKQLKNRGLMGLKDSDLENIAKERNSVLYLPSYIRENIEQELNIKPIKEFGTNYAEFYHDGANAIKKLLTEKQGQVAGAFEREELGDIDLVWGEVTDHIKHKGYGLSHILDKRIYQYIQQGLSKEEAEARAIELINKLPDIIKNGEIIKKPNEAIQIITDDTKIVLKSNYYGEPTNKWIVTTYERLEKDLDISAKPITKSTNSPLNSSENSTTTANKSQELNLSRAERRAMGIEEPKGKTLVIDEKAVKSDVREFGRLADQVGLGFKSAKEAKAVMDKCDKSKFDCGS
>NZ_CP018789.1|WP_086297016.1|540915_541224_+|hypothetical-protein
MTKDSYELLGFIISKATNGLMVYSSVDGEKGQIDMGEIGDAVVKFKNKREYKVFSKEQWLAMPKNAKEATKTAKKNEPVLNEFEEQESDLKGENDESANSLV
>NZ_CP018789.1|WP_086297018.1|541198_541726_+|hypothetical-protein
MSQQTAWYDEPLDNELNLDDESSESSNTQQSEPQKEVAKEPDKDTPKQSDTQKLELSSEDRRLLDEAAARERFSNEIAMAEKSVPGFDRGKVLHKLEEINKKDPATAANLFSSQGLELIWYKYFAHQANSDNVMDSHRARMENFNPNEAIEKINKGEASSADMVDFYSHLGEICK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP018789_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018789_3

535875-535978

Orphan

Consensus_repeat	Method
AGCGAATGCGACCCCGAAGGGGTGGTTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018789_3

>merge|NZ_CP018789|3|535875-535978|CRISPRCasFinder
AGCGAATGCGACCCCGAAGGGGTGGTTTCTGTGAAGTCGCCCCTAAAGAACCAAATACTAAAGCCCCGCAAAACCAGCGAATGCGACCCCAAAGGGGTGGTTTC

>NZ_CP018789|3|3|535875-535978|CRISPRCasFinder
AGCGAATGCGACCCCGAAGGGGTGGTTTC	TGTGAAGTCGCCCCTAAAGAACCAAATACTAAAGCCCCGCAAAACC
AGCGAATGCGACCCCAAAGGGGTGGTTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018789.1\|WP_086297016.1\|540915_541224_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297007.1\|529844_532709_-\|toprim-domain-containing-protein	unknown	unknown	gnl\|CDD\|225913
NZ_CP018789.1\|WP_180380826.1\|528425_528593_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297014.1\|536661_539196_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376231
NZ_CP018789.1\|WP_086297024.1\|545206_545728_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297020.1\|542447_543386_+\|DUF5309-family-protein	unknown	unknown	gnl\|CDD\|379950
NZ_CP018789.1\|WP_086297006.1\|528604_529282_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297005.1\|527934_528414_-\|DUF736-family-protein	unknown	unknown	gnl\|CDD\|368371
NZ_CP018789.1\|WP_192940207.1\|527146_527320_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297010.1\|533880_535548_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297004.1\|527312_527924_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297011.1\|535563_535827_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297008.1\|532708_533083_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297023.1\|544025_545210_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP018789.1\|WP_086297025.1\|545730_546006_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297021.1\|543387_544026_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297018.1\|541198_541726_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297013.1\|536086_536608_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297009.1\|533428_533812_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_192940208.1\|539314_540565_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376228

Protein	Function_ID	Function_description	E-value
NZ_CP018789.1\|WP_192940208.1\|539314_540565_+\|hypothetical-protein	gnl\|CDD\|376228	pfam18809, PBECR1, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1. A predicted endoRNase of the Barnase-EndoU-ColicinE5/D-RelE like nuclease fold found in polyvalent proteins of phages and conjugative elements. The predicted active site contains a conserved histidine and threonine residues.	1.71423e-24
NZ_CP018789.1\|WP_086297007.1\|529844_532709_-\|toprim-domain-containing-protein	gnl\|CDD\|225913	COG3378, COG3378, Phage associated DNA primase [General function prediction only].	3.83229e-45
NZ_CP018789.1\|WP_086297020.1\|542447_543386_+\|DUF5309-family-protein	gnl\|CDD\|379950	pfam17236, DUF5309, Family of unknown function (DUF5309). This is a family of uncharacterized proteins found in viruses and bacteria.	1.03104e-18
NZ_CP018789.1\|WP_086297005.1\|527934_528414_-\|DUF736-family-protein	gnl\|CDD\|368371	pfam05284, DUF736, Protein of unknown function (DUF736). This family consists of several uncharacterized bacterial proteins of unknown function.	3.38337e-07
NZ_CP018789.1\|WP_086297014.1\|536661_539196_+\|hypothetical-protein	gnl\|CDD\|376231	pfam18812, PBECR3, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3. A predicted endoRNase of the Barnase-EndoU-ColicinE5/D-RelE like nuclease fold found in polyvalent proteins of phages and conjugative elements. The predicted active site contains a conserved histidine and threonine residues.	1.62143e-17
NZ_CP018789.1\|WP_086297023.1\|544025_545210_+\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	2.32799e-05

>NZ_CP018789.1|WP_086297011.1|535563_535827_+|hypothetical-protein
MWGNFLGGLADFGKNIFKDFKATDFLNAGGQILGGIGQYKAAKSQGKMARDTFNYNKALMEEERARRKKADDALAAGFRASDYAKEI
>NZ_CP018789.1|WP_086297010.1|533880_535548_+|hypothetical-protein
MKKTKNRLFLIDDAFSKLENQKDRFLACERVYNATYDDAHRRRLAPQRSNIVERSRIYVPLAKTSIDILHSIFKSSFLGSGCPIEITRIGYNDDHDRALRDALTAAVKAKWRENKHFIGISRAVLSALYLPLGVVSVYWGDGDIQTKFIPINTIAFDPYASDINDVEYICYKFAKSRNDVKAKFKSGFYKSDDEYAVLKAGRRILIKEIYEKNWEKGGWDLTSYANDIEVRKAWFNQLPFCYGYCFENMPSVGREDLLNDDYIGVYGSCLPERVKELQQEYNIKRNQKIDLIENAIDPQFAINSEGGIVNANDLLSRKKVIRCNLSGDGDISKVVAPLLPTGSVYDVTTEIEMIKSEYEIASGVNSIMTGVTSASDRRSNTSLQTINAASGVRVESMFQSLAATMLHEYAKKYVKLLYKNLDDEYLIKITENPDIINIIGSKEERMSSDIDFDINVNFGTTISSDVVVSKINTLLGTLAQLGLNNPNLIMPLIKEMSVALLGENAPVYLIDEAFKELQAQQELAMATQAMKGEAMANDMAPQSDADKEAIIAGII
>NZ_CP018789.1|WP_086297009.1|533428_533812_+|hypothetical-protein
MQDDKELIKEMKAFFKVNSLEDIAERLGYSRNSANNWRNNGLNSRVISKFEKAKADKKKDDEAFDELFFGGGIGGILVRYDREDNTQHNYTLSPELVDFILLYINYGNKALLDKFTQDLKQIQNLIK
>NZ_CP018789.1|WP_086297008.1|532708_533083_-|hypothetical-protein
MSAFVSLDEAAAFHGISKLSLQKLKSSDKRLGRSDRFTEGGLVLLDFSNPLYEKTTYYYYKALAVAGNERALARAIAMSLGKSEHTIYSLFRRFKFKNQYTATKLIVALQSYIDSASLFDVKDL
>NZ_CP018789.1|WP_086297007.1|529844_532709_-|toprim-domain-containing-protein
MQDNIFELLKTYSKEQLRDLMSSRGIIFKDFKYHCPFHGQDKTPSGSISFKKGSAFFNCFACGTGGDAGKFIELYEKLSPAKAAKVALNFIGFNFEESLSDEELEAKKEAFIKLQKEQEAARAKLEQEAEQKAQMVRAKLSKIAPNFLQQAKNLGALAEPFDIFIAKTDYFDYLFDRYIGFDPQNDSVAIVISNEQGEVINIKHRTKFKWDSEARCYSNERVSGKWIGASGASAYPFPIDFYNEFDSDIVVICEGEKDAINLCSLGVCALTLGGVNNSWQKHKELLRDKIVYIWFDNDKAGYTSAIARYKEIEAVAKSVYITLFYKLCPAAPAKYDISDYLGANQAKFTSSDKIIDKLIYSSFKLTNDLIDEIGELYECDLKEFKEPFKKVTFSDICKEIMQTDKDGNYLNIIPVKGELDDNQIDYFIKLFKSKELKDITAEVKSAMLENRLFITPQADKDLEQWAKVVDKICDFQKILRTNYHQTHLADMCDSFIKSVRKLGYDIAEYKGQIYFWNGNFYSFVDDREIYKFLLHHWMGASGVDKKKITDRTATELIDNIRGQGVLIDAKRKEPSLINKRVINLRNGSIIISKSGKIVFSQHHNKKLYATNMLDFDYNPEAKCPKWEKFLSQVMNDEDRLTLMEFIGYCFLPSHDYESFLFLYGKSGSNGKSVILDVLRSFFGEDNVSNLQLQQLEGHELHGLANKMLNIGSEIDKLGVDKGQFSNLKALVSPRDQIQINPKNQQPYSLKPEDKPKFAFAGNDKPKSNIDNAVFRRMLLIGFDKEIKDDEKIRGLSERFSDELDGIFALALKGLNRLVTNGKFTKGQKMQDALDEYKDEVNPTRVFIRDAIKPNKERFTPNKYLYLLYCEFAKERGNRPMSQTKFTQTLKDELAMSNIDFQVISRKSSIPKIGLASVERGFAGIEINTDFDITSVTINNMNLDIENMSEPCSVL
>NZ_CP018789.1|WP_086297006.1|528604_529282_-|hypothetical-protein
MKQINDVVTFYDEDGNLIGVSQKNQRDEILNTDEELKTLKSDELPPIDIMNEEQKKAYELWITSATLENDFTPITERKLAQSLAEHGISASNSRINRWKQKFGWAKLLEHKINLAMINNESLNRTIKHTALGAAVENTKVDLERNTALLGTAYSIAEIELKELYHKRQNGSLSKDEFKRFEALFKIIADRDDRMNDRLAHIATEAVSSVEVFERLNQISLDIETE
>NZ_CP018789.1|WP_180380826.1|528425_528593_-|hypothetical-protein
MNPLKLFKPLLTPKVTTKPYILGADGIKYSTKFYIVMMDAIYTRRGGKLITRVSR
>NZ_CP018789.1|WP_086297005.1|527934_528414_-|DUF736-family-protein
MKIGYITQKSFTKDSETITYLSGSMQVLGIANMLEFTITESNSDNPNSPTYYIKLPRLKSNLANNIIIGSLWLRTSQSGNEYMSGYIDSPIFSGGRIEIICFKPYADDNPAILWNIIWEPAKKQKEQTTQTAVPDLEPTQPKVTPKDLHSGVADDSIPF
>NZ_CP018789.1|WP_086297004.1|527312_527924_-|hypothetical-protein
MKIDLNEIYKGLKAWRHERGITADSQKEGYLVNVMEELGELASALREYERFSKPSYPYPKNKKYAEHGIIDALCDISVFTINAGADIPCDFKTTQIQPNANYSINAELNFLIERITHFNKAIIFGDYPKDTAIYFNSILDKCADICEQYGFDFQIAMDETIKEINSRTGSYDKASKKWVKDESDEAKSKWYKADYEKARIKND
>NZ_CP018789.1|WP_192940207.1|527146_527320_-|hypothetical-protein
MIKKEFAVLLAEKACDEVAKMGFYPVSPLLLWAGRISEKKQRRARASRAKNYTKRFA
>NZ_CP018789.1|WP_086297013.1|536086_536608_+|hypothetical-protein
MGYYDRMLRTLQAPSTNGGVGTGLGLAAIGQALSNISKISDDRAKAIAEEDRANWERAYKDNEMAMAIEQNINNSAQRKFENDMAVKKLNLDEKATQAQINQMNTNAAIARDAHNLARLDNYTLTRLLQDFIQNGNVNSGLFAQYKFGVPINMDFMPSKGGVNIDKIGDIKID
>NZ_CP018789.1|WP_086297014.1|536661_539196_+|hypothetical-protein
MAEIYTVRSILGDESLQNLINQGRSQDEIISIAKAYKDEAIKSGDKDALNRMNLVSQKQGKADFFTRLGDKMDANGYETMGSIARGIDIVASKVAAPIASLVGDSDKEAQILADMKLTQSINEAKNLDKIATTARTQREYQIDSNNLLANAIGSYTKDSKTYARNLVEQAENSGYTAMDRFNIGMATTANATKYLIKSIIYGEDSKEANDIKDAQKILQASRDAYEANNPDKWNVANFAGEMVTDPLNAVGLAKGFKVANTAFKKGANVAFDLAQLGAIGGMAGAISEYGSHKDKDEQNVAGAAMMGAGAGVALGAGFMALGAVLNKIASRFGQKSTLEQNAQTAKDEAAKELEKGTPQDIDKRLQKISDDIEEAFSADENGENIARLLGQEYDDNINKAIKESEEVSTAIDDSVAKFANDNPKASASDIEIYINKTYAPSENEKELTRIINDDKPVTPRMAGYRVLGVLQKSMEYKTRFDRDTVVKRFKNHGFNDELANVFADAYIADDISVARRYLDSKVASNRQKSVEDGRNEWLENTTKSNKAKTPKNQDEILEEISSDKTQFKLIDDSDMTPELKSRLENDGYTLEREPESGVWEVSKGISDQEIKGSDEALENAVVKADKLDILDKSKPFRKAEKSELTDELMEEVIKNDSKLWIDNASDEVSKLVGLPNAKITLNGSAIKHTLQRHGENSVNVKNGEPPITLDDIKNHADIVNNADKRTFGVSDDGQKVLISAKQINGHFVVVETIGTKKRQLSFKTMYKVNGKLENNPLFKDSTASAKQIETAESSLSPKPSANLDSLSRANTKNSTPNEIKSQEPTQAEPNTNSRLEKNQEICRR
>NZ_CP018789.1|WP_192940208.1|539314_540565_+|hypothetical-protein
MANYITKEFLVKHDKEIKEIITQKTSGENRQIALNAFENLKENFDELRSVGIGDLVKPTAKGIKDKIAEIEIKSMSDKELVTQFQKLKDSKARVNENLYKYLENEIKKREKKLYPFINSDKKDYSYDLEKQLKNRGLMGLKDSDLENIAKERNSVLYLPSYIRENIEQELNIKPIKEFGTNYAEFYHDGANAIKKLLTEKQGQVAGAFEREELGDIDLVWGEVTDHIKHKGYGLSHILDKRIYQYIQQGLSKEEAEARAIELINKLPDIIKNGEIIKKPNEAIQIITDDTKIVLKSNYYGEPTNKWIVTTYERLEKDLDISAKPITKSTNSPLNSSENSTTTANKSQELNLSRAERRAMGIEEPKGKTLVIDEKAVKSDVREFGRLADQVGLGFKSAKEAKAVMDKCDKSKFDCGS
>NZ_CP018789.1|WP_086297016.1|540915_541224_+|hypothetical-protein
MTKDSYELLGFIISKATNGLMVYSSVDGEKGQIDMGEIGDAVVKFKNKREYKVFSKEQWLAMPKNAKEATKTAKKNEPVLNEFEEQESDLKGENDESANSLV
>NZ_CP018789.1|WP_086297018.1|541198_541726_+|hypothetical-protein
MSQQTAWYDEPLDNELNLDDESSESSNTQQSEPQKEVAKEPDKDTPKQSDTQKLELSSEDRRLLDEAAARERFSNEIAMAEKSVPGFDRGKVLHKLEEINKKDPATAANLFSSQGLELIWYKYFAHQANSDNVMDSHRARMENFNPNEAIEKINKGEASSADMVDFYSHLGEICK
>NZ_CP018789.1|WP_086297020.1|542447_543386_+|DUF5309-family-protein
MIKAGLIDSSEAFGKIADYESRILKVGRNETPFLSSISSMAPSNRDGSVAAGHMWFYDQLPDGLGHDDPSTASDEGGRMSSVSHYTGKRLENHYQILKQAFGVTGSEAEAMRVNGQKVIAAQREQALIQFKKTLEKILLSEQTAVARVNTAGAKVAGKCGGLKSFATASNKIDAGRVDLTWDSIRELLKIGYLNGSPYRILMMNDKQKDKLDDIIFSKAHVSGLNTSRIDNNVTHIGNTAYGTNIQVMLSPYLKDDEIIALKPDDIVKVNWRPMAEKKRETTDDAELYEIINEFTLRVCTPYAFAWLHNLKV
>NZ_CP018789.1|WP_086297021.1|543387_544026_+|hypothetical-protein
MTKAEFIKRAEFALKGDHPPPASSDLIDSLIYRAAATISDEIEPLELVECDKRFFEVYRHIDEYYFIRKFKIYDDSFGYDDENLNSALLYLFCFSVSAVAQNQSYFISLARKAMMAYQATIYDGYEVNDLQKALNRWGYAKPYVVTKALNAYYAWDEAFLSELDFYLSDHSKIRGLSVEKFIQHFIDYQNGVTSSQRADIKDLDRVMSERVR
>NZ_CP018789.1|WP_086297023.1|544025_545210_+|hypothetical-protein
MAIQKAFTQICQEILDRYDSVLDTHNLSQNIKREIQSAKSEVQANKDAAQQIKTETQQIKTETQQIKTETQQIKIGAEQIKSQTQQIKTQTEQIKSQTQQIKSEAQQIKLELVAKAQNLSELIDALEQIKQSNGVRVDEIIQSLILSDKEFLVRAMDELLKRAEYSHEYNHKVEEIRQLSQAISAKLEELRYGILDFADIVEDRLSSAGEHLIKKSNQLKLEATRAKHEIASKKEEVINLVESELGRASDYFAREFKSANIHKMELDERSTIARDLINELKDDELCDELYLVRGESALGRAKVASELLGLSIATGAAKAIGLRYERQIPKLVALQDETKEIKEQTQNRLDELNILLEASNAAAASKLKELDELTLEAHKMIKNSEFGNLLGVVL
>NZ_CP018789.1|WP_086297024.1|545206_545728_+|hypothetical-protein
MKLDGYSFSGDKTVSFNSNAVVSIGLYNALASPKAVTIEVLDELGRLKATLYCATLEGFKGYNTKIFVRNGQKLRVSADAGIGVNVGVINESYVARGVLTTEYIACVGDGVKSEFGLNGMSVNSFKELCIIFDGVYTAVFGKDYTLSDDGSVVRFNKVVANELEFVMIVIKQE
>NZ_CP018789.1|WP_086297025.1|545730_546006_+|hypothetical-protein
MRPKSYDISRGEINGEIIGGKLRRGVVSLPPILEDKSSIFWGYEGELVVLKSSGVICLVLEDIAQNDANTIENLKANNKIMYLSSFIGKDE

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Crispr_ID: NZ_CP018789_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018789_4

550678-550782

Orphan

Consensus_repeat	Method
AGTCTAGAGAGCTTAGCTACTAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018789_4

>merge|NZ_CP018789|4|550678-550782|CRISPRCasFinder
AGTCTAGAGAGCTTAGCTACTAAAGATGAGCTAAATAATCTAGCAACCAAAGATGAGCTAAGGGCTAAGGCTGATATAAGTAGTCTAGAGGGCTTAGCTACTAAA

>NZ_CP018789|4|4|550678-550782|CRISPRCasFinder
AGTCTAGAGAGCTTAGCTACTAAA	GATGAGCTAAATAATCTAGCAACCAAAGATGAGCTAAGGGCTAAGGCTGATATAAGT
AGTCTAGAGGGCTTAGCTACTAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018789.1\|WP_086297023.1\|544025_545210_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP018789.1\|WP_086297028.1\|548127_548529_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297024.1\|545206_545728_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297020.1\|542447_543386_+\|DUF5309-family-protein	unknown	unknown	gnl\|CDD\|379950
NZ_CP018789.1\|WP_086297026.1\|546005_546434_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297033.1\|553133_553622_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381597
NZ_CP018789.1\|WP_086297027.1\|546436_548125_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224495
NZ_CP018789.1\|WP_141081974.1\|552685_553123_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_192940209.1\|552555_552696_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297037.1\|556904_557699_+\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
NZ_CP018789.1\|WP_086297025.1\|545730_546006_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297035.1\|554047_554518_-\|DUF4065-domain-containing-protein	unknown	unknown	gnl\|CDD\|226128
NZ_CP018789.1\|WP_086297029.1\|548538_549171_+\|DUF4376-domain-containing-protein	unknown	unknown	gnl\|CDD\|373004
NZ_CP018789.1\|WP_086297030.1\|549603_549963_+\|DUF1353-domain-containing-protein	unknown	unknown	gnl\|CDD\|377774
NZ_CP018789.1\|WP_152023640.1\|554639_555800_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271182
NZ_CP018789.1\|WP_086297034.1\|553616_554051_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086297021.1\|543387_544026_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086242584.1\|557682_557994_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|223680
NZ_CP018789.1\|WP_086297036.1\|556404_556821_-\|phosphorelay-protein	unknown	unknown	gnl\|CDD\|223716
NZ_CP018789.1\|WP_086297032.1\|552215_552578_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP018789.1\|WP_086297023.1\|544025_545210_+\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	2.32799e-05
NZ_CP018789.1\|WP_086297029.1\|548538_549171_+\|DUF4376-domain-containing-protein	gnl\|CDD\|373004	pfam14301, DUF4376, Domain of unknown function (DUF4376). This domain family is found in bacteria and viruses, and is approximately 110 amino acids in length.	1.68498e-10
NZ_CP018789.1\|WP_086297030.1\|549603_549963_+\|DUF1353-domain-containing-protein	gnl\|CDD\|377774	pfam07087, DUF1353, Protein of unknown function (DUF1353). This family consists of several hypothetical bacterial proteins of around 100 residues in length. The function of this family is unknown.	1.23316e-24
NZ_CP018789.1\|WP_086297035.1\|554047_554518_-\|DUF4065-domain-containing-protein	gnl\|CDD\|226128	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown].	3.6033e-25
NZ_CP018789.1\|WP_086297020.1\|542447_543386_+\|DUF5309-family-protein	gnl\|CDD\|379950	pfam17236, DUF5309, Family of unknown function (DUF5309). This is a family of uncharacterized proteins found in viruses and bacteria.	1.03104e-18
NZ_CP018789.1\|WP_152023640.1\|554639_555800_-\|site-specific-integrase	gnl\|CDD\|271182	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.31734e-66
NZ_CP018789.1\|WP_086242584.1\|557682_557994_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|223680	COG0607, PspE, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	3.39645e-14
NZ_CP018789.1\|WP_086297027.1\|546436_548125_+\|hypothetical-protein	gnl\|CDD\|224495	COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only].	9.48202e-09
NZ_CP018789.1\|WP_086297033.1\|553133_553622_+\|hypothetical-protein	gnl\|CDD\|381597	cd00735, T4-like_lys, bacteriophage T4-like lysozymes. Bacteriophage T4-like lysozymes hydrolyze the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc) in peptidoglycan heteropolymers of prokaryotic cell walls. Members include a variety of bacteriophages (T4, RB49, RB69, Aeh1), as well as Dictyostelium.	9.24036e-28
NZ_CP018789.1\|WP_086297037.1\|556904_557699_+\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	6.5662e-142
NZ_CP018789.1\|WP_086297036.1\|556404_556821_-\|phosphorelay-protein	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	7.69464e-06

>NZ_CP018789.1|WP_086297030.1|549603_549963_+|DUF1353-domain-containing-protein
MNRVVVQPIDKDKFRVYKDLSYQGIYIPKGFVTNGANIPRIFWSLFPPNSPEYLSAVVIHDYMCANVSEYGYEMADRYFYDAMLEIGVAKWKAKLFYFWVKWYHKFKVFKNRGTPLAGL
>NZ_CP018789.1|WP_086297029.1|548538_549171_+|DUF4376-domain-containing-protein
MFYDINKNELVSLEIYYKDVEFSDENGEKHQGVDTYFLDNCDDETLRSLGFARVVEQEAPANDDIYKEPSILKSYDEAKNIYNISYEIADVSLEDAKEIKLDELSSIKATKLLTLNYGGNEYQIDSDSKINISGKVSQILLATSSGQDTGAINWITKDNKVVSFSKEEFMAFGVAVAAHTEMILFKHDQLRTAVNNATSIDEIKGIEWVD
>NZ_CP018789.1|WP_086297028.1|548127_548529_+|hypothetical-protein
MLLSGGALEIKDIDGNVVSGVTGNYFNLFSATFTTCGQVINLPSQAVGKKGFMVVKTTCKIGFTYQGVSNGAALNRTWWAMSTSKHRYVGEIANHQYEIATLPSTMIYEEYNTSSKGWHTSSTRYKIEILIYY
>NZ_CP018789.1|WP_086297027.1|546436_548125_+|hypothetical-protein
MGTRKFEKLILSSAKSKNDIVAEALAQINKYEAKDPANDYICSVIHAYDNGDNAGDQYIVINEKLRVEYGLKGNAVASSHYSMADIKAMIDAVDAKIPLDPAKEALLKEVETIEADIRAKEAQLPPKEKELRNLKQQKATIEQEIADLNSLIAEARAEGRSTTVLEASKAQRETDLAAKNREISTLEGQINEIKRQIPLLKEQAKNKQTQQEAIKSPELATKDFVNELKNTLTGSINTKANANATVNLTGNQTIAGNKTLSGATTLAATVINGATQLKGAVTATGAITSSGNVTFNTGQVTFNNKAPISSVAPTVANHLATKAYIDGINTTLTGSINAKANANAVVTLTGNQTIAGIKTFSSPVVVPNATANTHAVNLAQLNTKANANATVNLTGNQTIAGNKTLSGTTTLAATVINGATQLKGAVTATGAITSSGNVTFNTGQVTFNNKAPICNVAPAADTNLVNRAYSKKRGAFVAVTGGAINLNNGINFSLNLTAATNITVANAAANIGQTGEIFIAKGANIQAFSAPFNFRIAQSGFGANEVFSYVVVSSSLVRITRS
>NZ_CP018789.1|WP_086297026.1|546005_546434_+|hypothetical-protein
MPNSAMIIDPALAGGGIGLTPTQNQPTTTNCCDDKLDELIRYLSISVPAKLEELTLRIDAVAAHWQEASRIGKEVHNALISSLSANPSRFLIGGVEYDNFAKLNERLQEVVFDTLDRVEETKQFILDEVSKATVFDNIEIVE
>NZ_CP018789.1|WP_086297025.1|545730_546006_+|hypothetical-protein
MRPKSYDISRGEINGEIIGGKLRRGVVSLPPILEDKSSIFWGYEGELVVLKSSGVICLVLEDIAQNDANTIENLKANNKIMYLSSFIGKDE
>NZ_CP018789.1|WP_086297024.1|545206_545728_+|hypothetical-protein
MKLDGYSFSGDKTVSFNSNAVVSIGLYNALASPKAVTIEVLDELGRLKATLYCATLEGFKGYNTKIFVRNGQKLRVSADAGIGVNVGVINESYVARGVLTTEYIACVGDGVKSEFGLNGMSVNSFKELCIIFDGVYTAVFGKDYTLSDDGSVVRFNKVVANELEFVMIVIKQE
>NZ_CP018789.1|WP_086297023.1|544025_545210_+|hypothetical-protein
MAIQKAFTQICQEILDRYDSVLDTHNLSQNIKREIQSAKSEVQANKDAAQQIKTETQQIKTETQQIKTETQQIKIGAEQIKSQTQQIKTQTEQIKSQTQQIKSEAQQIKLELVAKAQNLSELIDALEQIKQSNGVRVDEIIQSLILSDKEFLVRAMDELLKRAEYSHEYNHKVEEIRQLSQAISAKLEELRYGILDFADIVEDRLSSAGEHLIKKSNQLKLEATRAKHEIASKKEEVINLVESELGRASDYFAREFKSANIHKMELDERSTIARDLINELKDDELCDELYLVRGESALGRAKVASELLGLSIATGAAKAIGLRYERQIPKLVALQDETKEIKEQTQNRLDELNILLEASNAAAASKLKELDELTLEAHKMIKNSEFGNLLGVVL
>NZ_CP018789.1|WP_086297021.1|543387_544026_+|hypothetical-protein
MTKAEFIKRAEFALKGDHPPPASSDLIDSLIYRAAATISDEIEPLELVECDKRFFEVYRHIDEYYFIRKFKIYDDSFGYDDENLNSALLYLFCFSVSAVAQNQSYFISLARKAMMAYQATIYDGYEVNDLQKALNRWGYAKPYVVTKALNAYYAWDEAFLSELDFYLSDHSKIRGLSVEKFIQHFIDYQNGVTSSQRADIKDLDRVMSERVR
>NZ_CP018789.1|WP_086297020.1|542447_543386_+|DUF5309-family-protein
MIKAGLIDSSEAFGKIADYESRILKVGRNETPFLSSISSMAPSNRDGSVAAGHMWFYDQLPDGLGHDDPSTASDEGGRMSSVSHYTGKRLENHYQILKQAFGVTGSEAEAMRVNGQKVIAAQREQALIQFKKTLEKILLSEQTAVARVNTAGAKVAGKCGGLKSFATASNKIDAGRVDLTWDSIRELLKIGYLNGSPYRILMMNDKQKDKLDDIIFSKAHVSGLNTSRIDNNVTHIGNTAYGTNIQVMLSPYLKDDEIIALKPDDIVKVNWRPMAEKKRETTDDAELYEIINEFTLRVCTPYAFAWLHNLKV
>NZ_CP018789.1|WP_086297032.1|552215_552578_+|hypothetical-protein
MIWGYGIMGLILALLWWQNDSLQDELKEQHTINKMAINANERWEAEISKLNSEFAKGLETLSELKSKKEVERVYVKERSSNTNSCIDAINAVYERLWERENNRTTSNAKSSYTNEPISAK
>NZ_CP018789.1|WP_192940209.1|552555_552696_+|hypothetical-protein
MSLYQPSKPNFSKRAKSQKEASDMVWELYLYIMELHYGMEALNDGK
>NZ_CP018789.1|WP_141081974.1|552685_553123_+|hypothetical-protein
MENEVLKMVESGGIIALLIVGVFFLFKTSKTLYEGRIQDLRESKLNRQQLDLVGDKIDAAISEIKSSKEAIVTELQKQHLVSESNSTNQLAMIRMLEQLANTKLDKIENDLIEVKNSTRDTQSILQNIRAASAARRQENNIKLRD
>NZ_CP018789.1|WP_086297033.1|553133_553622_+|hypothetical-protein
MSLSKDGLNELISELKVEEGFRASIYQCSEGVDTIGYGFNVKYLTKDEIALNDGVIEPMSEEVATQILNRKVKKLIKSVDEIYSWIDSLPEVVKIGIYDMIYQLGIKGFGSFVNTQKYLKLLDYSKAIENIKNSKWAKQTPRRANNLIKRLERARDDYKSFL
>NZ_CP018789.1|WP_086297034.1|553616_554051_-|hypothetical-protein
MKLKETANKEYHNTNLKESNPEILDISFTKIIDDCKFGLPTSSSYILNDKLKIQKIVKTLMHIREKKPRELILTEKTQSIGGCEKCDIDKWRWSNDKVKHFLAKFTSPVFIIRAGDSRIFGTIDNNCFYIHAIEYNLGDIYQHS
>NZ_CP018789.1|WP_086297035.1|554047_554518_-|DUF4065-domain-containing-protein
MTTISAIDTAKLALALLKKNDDEIIEYTSRLKLLKLLYYIQGYHLAMFNAPLFDDKMEAWLHGPVVPSVYRWAKKLTDEELQNQAMNDEQMGALNLHPQQTKLISEVLNMYDKYSAYGLRDKTHTEMPWLSVYEQGQNNEITTDSLKNFFTPLVEK
>NZ_CP018789.1|WP_152023640.1|554639_555800_-|site-specific-integrase
MHKKPMTDKELKSLKPTDKIYRKSCSYCGLMVRVMPSGNKYFEFENKANKIRLAIGEYGDISLNRAKEIAFDMLSRLKSGESLKNSGVTFGALADRLLEIKSATLAPSSIKRDRILLQKPKKLLNMDISKITTLDIIEAIKEFENGSDTPKRLFNLISQVYKSANHITRNITTDINYKYTFKSVSKQNYPTLTKTSDIKALMMAIDEYNGYIATKYALKLAIYSAVRPFNARSAHWDEIDLKNKIWTIPASKMKMKREFELPLSTSLVRILNEYKELQGARGYLFKSLKSDIRPLSENALNTALRRMGYTRDELVSHGFRAMFSTLAHENLEAHKQSSEIIERCLAHQDKNSVRAVYNRSKQIEYMRKVMEWWGEYLDRLLLDKNN
>NZ_CP018789.1|WP_086297036.1|556404_556821_-|phosphorelay-protein
MGLLKELEANYELDIIEDYLTHFGFINGTLDKLIVNLSRSDKFDDSSNELYRIFHNLKTASQYLELDQIVKLTTIVEDITSRLKSSHTTGATASNELIDWLLLVVDQLQGYLDDIENDEIYLRILNPKIIAIPNEIFN
>NZ_CP018789.1|WP_086297037.1|556904_557699_+|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MKKVTIGDLVAKKNREKIVMITAYDALFARLFDDYADMILVGDSLNMSFGGKNETIGLSVDEMIYHAKAVQIGAKRAFLVVDMPFGSTITPKITLKNAVKIYKNTLCDAVKIEGSKEMAQTIKLLNQNGIAVIAHIGLKPQLSRKEGGYRVAGKDENEANAIIEDALALEAAGAKMVLIEGVPSHLAKRVTQALSVPTIGIGAGSDTDGQVLVWSDAFGFYDEFKPKFVKRYLDGANLIREAMKKYADEVKNIKFPSQEYEYTK
>NZ_CP018789.1|WP_086242584.1|557682_557994_+|rhodanese-like-domain-containing-protein
MNIQNSKIVDIRLPSEWLEFGILNGSHLITYANLSGKVNPLFVSSIESIFKKDDEFYLMCATATRSKDALKLLKKHGFSNVKEIRGGAYYYEKMGAKFDKFEL

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Crispr_ID: NZ_CP018789_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018789_5

1347555-1347644

Orphan

Consensus_repeat	Method
CTAAAAACCTTAATTCCCAAAATATGATAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018789_5

>merge|NZ_CP018789|5|1347555-1347644|CRISPRCasFinder
CTAAAAACCTTAATTCCCAAAATATGATATGTCACCAAATTAACATTCATAATTCTTTTTTCTAAAAACTTAATTCCCAAAATATGATAT

>NZ_CP018789|5|5|1347555-1347644|CRISPRCasFinder
CTAAAAACCTTAATTCCCAAAATATGATAT	GTCACCAAATTAACATTCATAATTCTTTTT
TCTAAAAACTTAATTCCCAAAATATGATAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018789.1\|WP_086298612.1\|1345305_1346004_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|133009
NZ_CP018789.1\|WP_192940174.1\|1337828_1338752_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133039
NZ_CP018789.1\|WP_192940175.1\|1338778_1339789_-\|dTDP-glucose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224013
NZ_CP018789.1\|WP_086298182.1\|1352696_1352918_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086298173.1\|1348975_1350484_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|237195
NZ_CP018789.1\|WP_192940176.1\|1344256_1345306_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_CP018789.1\|WP_086242678.1\|1340668_1341226_-\|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl\|CDD\|380337
NZ_CP018789.1\|WP_086242684.1\|1356854_1357901_+\|asparagine-synthase	unknown	unknown	gnl\|CDD\|238949
NZ_CP018789.1\|WP_086242668.1\|1339791_1340658_-\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl\|CDD\|367904
NZ_CP018789.1\|WP_086242666.1\|1342298_1343480_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|100053
NZ_CP018789.1\|WP_086298156.1\|1341227_1342112_-\|glucose-1-phosphate-thymidylyltransferase-RfbA	unknown	unknown	gnl\|CDD\|130274
NZ_CP018789.1\|WP_086298165.1\|1346005_1347466_-\|CDP-glycerol-glycerophosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|340861
NZ_CP018789.1\|WP_086242685.1\|1358797_1359220_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018789.1\|WP_086242682.1\|1353950_1355366_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|379337
NZ_CP018789.1\|WP_086298185.1\|1352918_1353908_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|372667
NZ_CP018789.1\|WP_086298179.1\|1351104_1352694_+\|HAD-IIIC-family-phosphatase	unknown	unknown	gnl\|CDD\|226399
NZ_CP018789.1\|WP_086242683.1\|1355346_1356855_+\|CDP-glycerol-glycerophosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|224799
NZ_CP018789.1\|WP_086298176.1\|1350516_1350888_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|132997
NZ_CP018789.1\|WP_086298159.1\|1343574_1344264_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP018789.1\|WP_086242686.1\|1357909_1358326_+\|adenylyltransferase/cytidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|173922

Protein	Function_ID	Function_description	E-value
NZ_CP018789.1\|WP_086298612.1\|1345305_1346004_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|133009	cd02516, CDP-ME_synthetase, CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.	4.65265e-64
NZ_CP018789.1\|WP_192940174.1\|1337828_1338752_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	5.68795e-80
NZ_CP018789.1\|WP_192940175.1\|1338778_1339789_-\|dTDP-glucose-4,6-dehydratase	gnl\|CDD\|224013	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane].	0
NZ_CP018789.1\|WP_086298173.1\|1348975_1350484_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|237195	PRK12767, PRK12767, carbamoyl phosphate synthase-like protein; Provisional.	7.68494e-38
NZ_CP018789.1\|WP_192940176.1\|1344256_1345306_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	1.4179e-41
NZ_CP018789.1\|WP_086242678.1\|1340668_1341226_-\|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl\|CDD\|380337	cd00438, cupin_RmlC, RmlC carbohydrate epimerase, involved in dTDP-L-rhamnose production. RmlC (deoxythymidine diphosphate (dTDP)-4-keto-6-deoxy-D-hexulose 3, 5-epimerase or dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase; also known as RfbC) is a carbohydrate epimerase involved in the production of dTDP-L-rhamnose, a precursor of the bacterial cell wall constituent, L-rhamnose. L-Rhamnose (6-deoxy-l-mannose) plays an important role in the cell-wall structure of many bacterial species. It has been found to contribute to the virulence of several species, including the Gram-negative Salmonella enterica and Vibrio cholerae, where it is present as a part of the O-antigen, and is essential for the growth of Gram-positive bacteria such as Streptococcus pyogenes. RmlC converts dTDP-6-deoxy-D-xylo-4-hexulose to dTDP-6-deoxy-L-xylo-hexulose by catalyzing the epimerization of the 5-methyl and 3-hydroxyl groups of hexulose, the third of four steps in the dTDP-L-rhamnose biosynthetic pathway. RmlC belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	3.35497e-85
NZ_CP018789.1\|WP_086242684.1\|1356854_1357901_+\|asparagine-synthase	gnl\|CDD\|238949	cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .	3.16924e-16
NZ_CP018789.1\|WP_086242668.1\|1339791_1340658_-\|dTDP-4-dehydrorhamnose-reductase	gnl\|CDD\|367904	pfam04321, RmlD_sub_bind, RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.	1.83867e-99
NZ_CP018789.1\|WP_086242666.1\|1342298_1343480_-\|hypothetical-protein	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	1.9329e-16
NZ_CP018789.1\|WP_086298156.1\|1341227_1342112_-\|glucose-1-phosphate-thymidylyltransferase-RfbA	gnl\|CDD\|130274	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form. Alternate name: dTDP-D-glucose synthase homotetramer This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	2.19756e-178
NZ_CP018789.1\|WP_086298165.1\|1346005_1347466_-\|CDP-glycerol-glycerophosphotransferase-family-protein	gnl\|CDD\|340861	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins. beta-diglucosyldiacylglycerol synthase (processive diacylglycerol beta-glucosyltransferase EC 2.4.1.315) is involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. This family of glycosyltransferases also contains plant major galactolipid synthase (chloroplastic monogalactosyldiacylglycerol synthase 1 EC 2.4.1.46). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	7.62129e-06
NZ_CP018789.1\|WP_086242682.1\|1353950_1355366_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|379337	pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1.	1.01236e-07
NZ_CP018789.1\|WP_086298185.1\|1352918_1353908_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|372667	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	5.33e-13
NZ_CP018789.1\|WP_086298179.1\|1351104_1352694_+\|HAD-IIIC-family-phosphatase	gnl\|CDD\|226399	COG3882, FkbH, Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	4.13491e-77
NZ_CP018789.1\|WP_086242683.1\|1355346_1356855_+\|CDP-glycerol-glycerophosphotransferase-family-protein	gnl\|CDD\|224799	COG1887, TagB, Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane].	0.00127973
NZ_CP018789.1\|WP_086298176.1\|1350516_1350888_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	1.60349e-11
NZ_CP018789.1\|WP_086298159.1\|1343574_1344264_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	2.46784e-147
NZ_CP018789.1\|WP_086242686.1\|1357909_1358326_+\|adenylyltransferase/cytidyltransferase-family-protein	gnl\|CDD\|173922	cd02171, G3P_Cytidylyltransferase, glycerol-3-phosphate cytidylyltransferase. Glycerol-3-phosphate cytidylyltransferase,(CDP-glycerol pyrophosphorylase). Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most, but not all, species encoding proteins in this family are Gram-positive bacteria. A closely related protein assigned a different function experimentally is a human ethanolamine-phosphate cytidylyltransferase.	1.00488e-33

>NZ_CP018789.1|WP_086298165.1|1346005_1347466_-|CDP-glycerol-glycerophosphotransferase-family-protein
MENQESILEIFGIKILTIRNINIGAKNIYLFFIPFLSIRKSNNITKINLLILHRLHIKIKNNYTLWSKKRTVDNIIKRNKKKRKDIIKRFKKGEKIKICLMVQRPGIWHFDDLYNIFNKNSQFEFFAFIAPEKSYTRLIQEKYMTEIENELKSRNIVYYKGYDYNRNKFIDLKTEYNPDIIINTDFCKFHFHEKYYIDNFQDKINCLNEYGFSVMQDEMTSDFDLNNRVDLYFRPTYIHYNMAKQYMKNKAINVKVTGSPKLDKRFEADFKPVDIWKLQDRPKKRIIWAPHRSDRYPKNMYQYNGFYILYDFMLKLAQKYKDEVQFAFRPHPVLKSDLYHIRWGIKQTEEYYKKWDELDNTQLFEGNFIDLFATSDAMITDSCSFLAEYTSFNKPIFHTVTPTSRTKLNEFGEELYNFFYRPSGTKNGDLEKAVEDYIVNIIIKNNDYKKEQRTEFVKQYFGKINGKTASENIYDEIIKFLKKGDV
>NZ_CP018789.1|WP_086298612.1|1345305_1346004_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAIIGLIIAGGVGARMQQAIPKQFLTVYDKPIIAYTMEKFENHPAVDIIAVVCLDGWEHILESYAKQYKITKLKHIFPAGAVGQESIKNGIMGLTEFYNDDSIVLIHDAIRPNLSEDIISDCICSIKKNGFTVVVVPCNEAMMETYNFESSEKSFPRDNLKRTQTPQGARLGQLVELHKKAKEKGIINSVATCTLVTETGSTIYFSTGSSKNIKITTQEDIDIFKALLKQGK
>NZ_CP018789.1|WP_192940176.1|1344256_1345306_-|NAD(P)-dependent-oxidoreductase
MYINNKLYQEDIKKIIIEDFIFLKNKSILITGASGLIGSCIVDILMFLNKKFDFNINIFAIFSNIENFEKRFPSYKNNKHFNILVQDIANLFDYNFYVDYIIHAASNTHPHLYGTKPVETIKLNIIGTLNVFNFAKKNKNSKSIFLSTMEVYGSNYNIKAFKENDIGFVNFMKSRACYPESKRTCETLCHSYIEEYDLDIVIARLGYIYGPTVKMDSTKADVQFLAKALNNENIIIKSEGLQKRSYLYVLDAAAGLLTILLKGKKGETYNVAAKSGNVLLRDYAKQLAQIANVRIVFENATEQEQKGFSTVLNSTLNDEKIKSLGWNEKFTFNEAIEHTFKIKKELINA
>NZ_CP018789.1|WP_086298159.1|1343574_1344264_-|L-ribulose-5-phosphate-4-epimerase
MLKELKEQVFKANLELVKYNLVIFTWGNVSARDGDYIIIKPSGVEYDKMKADDMVVLDLDGNKIDGKYNPSSDTLTHLELYKAFPNIKGITHTHSNYATSFAQAGCEIVALGTTHADYFYGAIPITRHLDEIEVVENYEKNTGKVIIEAFKGIDYMAIPGVLVRSHGVFAWGKSAGDSIHNAVVIEELAKMNYQSIQLNPDIKNFPKYILDKHYSRKHGKNAYYGQKHI
>NZ_CP018789.1|WP_086242666.1|1342298_1343480_-|hypothetical-protein
MQKHTKENGNVVYGDLSRQVNLKLDFKGKNNIIFFAGGSKNINICFYGNNALAFIGNNTIISGQQTAMSSDSVLFVDDNSSFGGVTIRPFEAKNIIFGRDCMFSWSTVVTSTDHHLIMDCNTNNRVNYSKSVYIGDHVWCGMEATIYKGSFVASGAIIGTKSLATKIFYSNTANAGIPAKEIKNELFWLRDSPFAGQWTKEQTLKHSNIPNDDFKFTYNKAEFLSPKAIEEKLDSLKTAFEKLEFIYDAIYCNKNKNRFAYFKDMPYDIPLPKYENKFKLLKFEEIKPTLTTQSKSVASQPSQPSSLELEIKILKDKLISKEQEIKNMKDKIEKQNANMHNLENNYQKALRAKSHLSYKLGQALIKADKNRYKGGYIKFIFEAMKIKREHKYN
>NZ_CP018789.1|WP_086298156.1|1341227_1342112_-|glucose-1-phosphate-thymidylyltransferase-RfbA
MKGIILAGGSGTRLYPITKGASKQILPVYDKPMIYYPLSVLMLAGIRDMLIISTPRDLPRFEELLGNGANLGIKLSYAAQPSPDGLAQAFLIGEEFLDGSSACLILGDNIYYGHGLRNLLFKAKEAIKQNYATVFGYYVNDPERYGVVEFDKNGKAVSIEEKPANPKSYYAVTGLYFYPNDVVEKAKLVRPSNRGELEITTLNQFYLDENRLNVEVMNRGFAWLDTGTHSSLLEASIFVKTIEDRQSLKIACLEEIAYDLGYINKQQLLKMAEPLKKNQYGQYLLKRANEISEK
>NZ_CP018789.1|WP_086242678.1|1340668_1341226_-|dTDP-4-dehydrorhamnose-3,5-epimerase
MKFTRLSIPDIVLIEPNIYQDDRGYFLESFRLDKIREFLGYNIDFVQDNESKSNLWVFRGLHYQKPPFTQAKLVRVISGSICDIVVDIRKNSPNFGQYLKINLDGISKKMLFIPKGFAHGFLTLENNTIISYKTDNYYSFEHDSGIAYNDPQIGIDLEFDENKLILSDKDKTQPMLSDIISPFDF
>NZ_CP018789.1|WP_086242668.1|1339791_1340658_-|dTDP-4-dehydrorhamnose-reductase
MERILVFGAYGQLGSEFRYLSNRYSNFSFMFLGKNDIDIINFNETKEFIKSKSFTVIINCAAYTNVDKAEEEFEYAKLVNYKAVENLGKIAHDNNIKFIHISTDYVFNGNHCSPYCEFDQAFPINKYGLSKLMGEQILINMQIKKCIIIRTSWLYGYYGKNFVYTILNAIKANNPLSVVSDQIGTPTNSRDLATTILNIVPLINNDKPQIYHYSNEGVASWYDFANAITSISKIKCQIFPIESKDYPTIAVRPLYSVLNKSKIKQDFGVAIPYWRDSLVEFIKSIKEL
>NZ_CP018789.1|WP_192940175.1|1338778_1339789_-|dTDP-glucose-4,6-dehydratase
MKSILLTGTAGFIGSNFVEYFLNKYENYILINLDLLTYAGNLNNLNKCFNNHRFKFIKGDICNRELVEFIFKEYDIKGVIHFAAESHVDNSIKNPGVFIHTNVNGTFTLVDVAYKYWMDSPFNYKNKYDGCRFHHISTDEVYGTLGDIGLFTETTPYAPNSPYSASKASSDMIIRAYVETYGLNAVITNCSNNYGPKQHDEKLIPTIIRNALQGKNIPIYGDGKNIRDWLYVLDHCKGIDLVYHNGVRGNTYNIGGRNERTNLEIANTICEILDKRLPKPTSYKNQITFVLDRAGHDRRYAIDATKIETKLGWKADENFDSGIIKTIDWYLKRYSL
>NZ_CP018789.1|WP_192940174.1|1337828_1338752_-|glycosyltransferase-family-2-protein
MATYNGQKYISKQLDSILAQTYSNIVIYIRDDCSSDNTMDIISKYKQKYSHKFIINKNKQNLGFVKNFELLLSEVDYDYIAISDQDDIWKPNKLEKELKAMMEIEKDNPNLAIMVHSDLEIIDSDENQICKSFLKKKGYSLSHSKDLGQILGPCGVMGNTILMNKNLKNIALPFSANIEFHDYYLAVINEIYGKRITLNEPLVQYRIHLDNTSNNNILKLEKNKYRGLPFLNTGKAMCLKSLNKDNINIEDLNIINFFLDYLECKDYAFSYYFSLLSNNLVKKGFWYRFKLFFKFIINTPLSKIMLR
>NZ_CP018789.1|WP_086298173.1|1348975_1350484_-|ATP-grasp-domain-containing-protein
MIRILFLSAGTNAAYHCIKILKEKFSNNFYIVGVDINEKYLVASCNYLDNFYKVPRSDSMGYYDIILEILAQENIDFLFTILDVDQGFFSSDNKDLENIGVRTFSVDSKLWRSYKSKDTMNNLLNLHGFLTPKLYNLNEIELNRKYFIKSKKGFGSIGARIATGKDIHNINNVDDYLIQEICIGPEYTVECFKYHNTIRTVTRERIETKAGVCTKTKVFNNLELEHIAREFAKKIDCPHCFNLQFMKNSIDQFVITDVNFRFAGGMSLAYAAGWDEVSALAEIMLNKSENEILATVPDKIQPQYIVRAYNDVVTKIDRSIVAFDFDGTLLDSRKRHIVVLDDILKQFDINLDTTDLIDFKRNNKNNVDYLISKGINENLAKEIQAKWIENIEKEEYLALDTLYSATIKVLEEYSKENDLILVTARNNKVGLQNQIDRFDLRKYFKEIYVVNSNKDISTNKAQILKNENVAKFFGDTLSDKKAADLAGIEFIYCENGFYKLIQ
>NZ_CP018789.1|WP_086298176.1|1350516_1350888_-|glycosyltransferase-family-2-protein
MSGKSVGVIIPIYNTSKYLDKCLNYIYSQTYQNIKIMLINDGSTDKKVDEVMEDYANYDDYIEANHPTSIENYNLQNKIIISNKEWSELSLKQSNTLLVDTNLQTISILTQKFLSIRHLLRYW
>NZ_CP018789.1|WP_086298179.1|1351104_1352694_+|HAD-IIIC-family-phosphatase
MISDLQDFIFENKLTRSKILSYSSSLANLARFRINVYRNHSFELIENSLKPFLDYAQISIEFSYSDYDDSLSFLNLDQNSDLLILWIDSTRYQNIDFNKFIIDRIEYLTKIYSKKILIIPFETNLTIENSSVVVYNLNKIKHFLNDDYLDLRLEKFSGTKLSSKALIEISKDLGLNYIPSILLPNIKALIFDLDNTLYKGVLGEDKIYGLELTNAHKLLQEHIVELSKQGFFICLASKNEEQDVIEMFKTRKDFPLQLEHITKYYISWKEKSKAVSEIIKFLNIGIDSVLFIDDNMGEIISMLNDYPSIKYIVAKNKADITLNVLKNYPRMLKLNIKDEDKIRSKDTQANKQREFLQKTLSKADYIKSLDIKLTYSINNNKQIPRISELANKTNQFICGYKRYSETEVKELMNDKNCMVITIKLEDKLSNSGIIGVCVFRDKNRYLEMEECFISCRALGRGIDNSIVLYPIQLALDKFGRSEFKINFIKGERNKPAENFLVENLFDFINASSKFNKDINQDLVSIIIEE
>NZ_CP018789.1|WP_086298182.1|1352696_1352918_+|hypothetical-protein
MDNKIIEIISTIAKINRDQLIEKIDIEKLWESIVHVEIIIALEEEFDIVFTQEEIGDTTTVRKIIDLIKTKAQ
>NZ_CP018789.1|WP_086298185.1|1352918_1353908_+|GNAT-family-N-acetyltransferase
MFHSFKEKGFAYSIRPVTLDDAQFIIDIRLEDSERNKYIHKISRDLKLQINWLNKYFKSPDDYYFVVENNLTGEKEGLIGIYNIKDRVAELGRWVVKKGSMATIESIQLAYKFAFKRLNLAEIYTKTIEDNVLVVEFHKSIGAKTRKILINEFEIDGQSYNAVWQFIDRDNYFSCVSFGLEEKSIKIFQRNLKVALGNFEFHHIGIATKNIEKEFKTYAMLGYTKEAFFDGDINQGVKGLFITAKNQPRLELLENLEGSSTLDYWLKQGIKLYHFGYMVSDIDKAFEIFTVKLGAKIISPMKISQFFGKRICFVVLNNMFIIELIESKS
>NZ_CP018789.1|WP_086242682.1|1353950_1355366_+|glycosyltransferase-family-4-protein
MHSRLLKLTEIIKSQGYENICFFQPVHAITGATTCKVQMAEYLANNTNLNIYFCDLIDGHPRTLIKNIKNINFIPYDPNSELFPLNKKCVIFATSTRVILLKNMHKDNKIIFWHNETNPCAWDLLFLNNETLKFFNLIKHSRAIMFHDWSSMDSINRYSNANIYNNDFYYLTVPNKTLKAPKELLDIDYINIGFLSRLSADKIQSLFYLAKNLYEINISKKIRLHIIGDGVYRKKVEQELMKYGDKIDILYTGSIAYNQLDEYLINNIDLLYGVGTCVIEASALRIPSAVLLMNTNEIQDNQVYWYFDTNCYCTGITVDQKKDFNIKYISIANSVETILLKNGKRNIGNKCYQYYKNNHGNINKLASIFLEQIINSSLTFDKLKRVIRYTPYSLIKVIRLSILGLKLFKKIDFVVRTDFYIFGIRYFRINRRNGINKYYLFGIKIISYKEYIPYKFPNSMGKKVHYANKKI
>NZ_CP018789.1|WP_086242683.1|1355346_1356855_+|CDP-glycerol-glycerophosphotransferase-family-protein
MQIKKYNRVFLFYKIKIFNFELIKEKIYIYIFKLKLLTLNKKYFNKFIFLKYFFKINNIYDNLYIKLFYILPFLKIECRDVPYEILNPKSNFFRLKHFNTLRKVRRKYKNNEKIVVLFFVSRISCFIWENLYKIFRENPIFNVKICVVPFCYTGKEEMIKYSTTAYEQLRKLGYDVIKAYNETTDTYLDIRKELKPDIIFHNKSWWKHLPQQYHLTNFPQSLNYLIEYGISGAKNPDGHFNLDSHWLCDTYFVPSIEHLKMAREISKIKGKNCVFLGYPKLDIFFDQNYQPKDVWKKQNKSKKKVIWAPHWLYDAATLYSTSTFAEIYDFMLYVADKYKDEIQFAFKPHPMLYKALQSRPVNGQKWTIKQINEYYQKWSTIENCQFENNRFEDLFLTSDAMIFDSISFMAEYMVTGKPALFTKGKKNILDFDEFGNKVYANLYHTFDLKKDIINFIEDIVLNENDYKKSDRAIFINNYLRSPNNKTSAKNIYEYITNLLKEN
>NZ_CP018789.1|WP_086242684.1|1356854_1357901_+|asparagine-synthase
MTDKLYCMSHYLAFRFIKDENINFFDGLNHTVFKPRDEKEITPVSTIDEMDRIIKDKISEFYVPNKTAILLSGGIDSAILASYLPKGTKAYTFKCIAPNAIDETAQAKKYCDIYGLDHEIIEMNWSDFEELTPEILKADGVPFHSIEVQLLKAAKHAKSQGIEKIIYGDAADYVFGGMDKILSKTWKFDEFVERYNSIEPSKVLKNSISVKEIYEPYRKSLDLIDFQAFLKDYMDIESYTSYMHAFELGGVEYLDPYSFMKMARPLNLNRVRNGEPKYMVRELFAKRYPNIETPTKIPMPRAMNQWLKEYIPTRSEFIENCAQDMTGDQKWLCWCLEQFLNMHDKGEL
>NZ_CP018789.1|WP_086242686.1|1357909_1358326_+|adenylyltransferase/cytidyltransferase-family-protein
MVIGYTTGVYDLFHIGHLNLLKNAKGLCDKLVVGVTVDKLVEYKNKRSVIPFEERIEIVRNIKYVDAAIPQEELDKFKMWEKLNFDVLFVGDDWFNAPSWREMETKFNEVGVRVVYFPYTKGTSSTILNETLKKLRDQ
>NZ_CP018789.1|WP_086242685.1|1358797_1359220_-|hypothetical-protein
MTVIKRDFVPENTKSYYYTRPLSSGKAYFLEDANGKIFYASKNYIDEHLKVDLSKIPDFTISLISMRSYENSRNRSCSKNKTHINYDKSYAIAYITLREEKLIEYKNISYEPLKNYYDKYMRDRDLADEDIKRIINIEQS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	NZ_KX711616	Bacillus subtilis strain 72 plasmid pBS72, complete sequence	17220-17249	7	0.767
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	NZ_CP046369	Spiroplasma citri strain BR12 plasmid pScpBR12-1, complete sequence	25756-25785	7	0.767
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	NZ_CP047445	Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-8	50860-50889	7	0.767
NZ_CP018789_1	1.3\|385885\|34\|NZ_CP018789\|CRT	385885-385918	34	NC_021772	Salmonella phage FSL SP-058, complete genome	7501-7534	8	0.765
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	NC_017419	Borreliella burgdorferi N40 plasmid N40_lp28-2, complete sequence	6239-6268	8	0.733
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	NC_011779	Borreliella burgdorferi ZS7 plasmid ZS7_lp28-2, complete sequence	6143-6172	8	0.733
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	NC_001852	Borreliella burgdorferi B31 plasmid lp28-2, complete sequence	6101-6130	8	0.733
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	KU599879	Flavobacterium phage Fpv3, complete genome	19085-19114	9	0.7
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	MK764441	Flavobacterium phage FPSV-F12, complete genome	85875-85904	9	0.7
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	KU599886	Flavobacterium phage Fpv20, complete genome	20080-20109	9	0.7
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	NC_031931	Flavobacterium phage Fpv2, complete genome	19955-19984	9	0.7
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	KT876726	Flavobacterium phage FpV21, complete genome	19892-19921	9	0.7
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	KT876724	Flavobacterium phage FpV4, complete genome	19026-19055	9	0.7
NZ_CP018789_5	5.1\|1347585\|30\|NZ_CP018789\|CRISPRCasFinder	1347585-1347614	30	KU599877	Flavobacterium phage Fpv1, complete genome	19980-20009	9	0.7

1. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to NZ_KX711616 (Bacillus subtilis strain 72 plasmid pBS72, complete sequence) position: , mismatch: 7, identity: 0.767

gtcaccaaattaacattcataattcttttt	CRISPR spacer
gtacgcaaattaacatttattattctttaa	Protospacer
**   ************.** *******

2. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to NZ_CP046369 (Spiroplasma citri strain BR12 plasmid pScpBR12-1, complete sequence) position: , mismatch: 7, identity: 0.767

gtcaccaaattaacattcataattcttttt	CRISPR spacer
ggtatttaaataaccttcataattcttttt	Protospacer
* .*.. ** **** ***************

3. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to NZ_CP047445 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-8) position: , mismatch: 7, identity: 0.767

gtcaccaaattaacattcataattcttttt	CRISPR spacer
ggtatttaaataaccttcataattcttttt	Protospacer
* .*.. ** **** ***************

4. spacer 1.3|385885|34|NZ_CP018789|CRT matches to NC_021772 (Salmonella phage FSL SP-058, complete genome) position: , mismatch: 8, identity: 0.765

atctattcccatcattaagaagcaacacaagacc	CRISPR spacer
atctattcccttcattaataagcattgcaaatac	Protospacer
********** ******* ***** ..***.  *

5. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to NC_017419 (Borreliella burgdorferi N40 plasmid N40_lp28-2, complete sequence) position: , mismatch: 8, identity: 0.733

gtcaccaaattaacattcataattcttttt	CRISPR spacer
tggaattaattaacatttataattcttatt	Protospacer
   * . **********.********* **

6. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to NC_011779 (Borreliella burgdorferi ZS7 plasmid ZS7_lp28-2, complete sequence) position: , mismatch: 8, identity: 0.733

gtcaccaaattaacattcataattcttttt	CRISPR spacer
tggaattaattaacatttataattcttatt	Protospacer
   * . **********.********* **

7. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to NC_001852 (Borreliella burgdorferi B31 plasmid lp28-2, complete sequence) position: , mismatch: 8, identity: 0.733

gtcaccaaattaacattcataattcttttt	CRISPR spacer
tggaattaattaacatttataattcttatt	Protospacer
   * . **********.********* **

8. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to KU599879 (Flavobacterium phage Fpv3, complete genome) position: , mismatch: 9, identity: 0.7

gtcaccaaattaacattcataattcttttt	CRISPR spacer
aagcaaaaattaatattgataattcttttg	Protospacer
.     *******.*** ***********

9. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to MK764441 (Flavobacterium phage FPSV-F12, complete genome) position: , mismatch: 9, identity: 0.7

gtcaccaaattaacattcataattcttttt	CRISPR spacer
aagcaaaaattaatattgataattcttttg	Protospacer
.     *******.*** ***********

10. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to KU599886 (Flavobacterium phage Fpv20, complete genome) position: , mismatch: 9, identity: 0.7

gtcaccaaattaacattcataattcttttt	CRISPR spacer
aagcaaaaattaatattgataattcttttg	Protospacer
.     *******.*** ***********

11. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to NC_031931 (Flavobacterium phage Fpv2, complete genome) position: , mismatch: 9, identity: 0.7

gtcaccaaattaacattcataattcttttt	CRISPR spacer
aagcaaaaattaatattgataattcttttg	Protospacer
.     *******.*** ***********

12. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to KT876726 (Flavobacterium phage FpV21, complete genome) position: , mismatch: 9, identity: 0.7

gtcaccaaattaacattcataattcttttt	CRISPR spacer
aagcaaaaattaatattgataattcttttg	Protospacer
.     *******.*** ***********

13. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to KT876724 (Flavobacterium phage FpV4, complete genome) position: , mismatch: 9, identity: 0.7

gtcaccaaattaacattcataattcttttt	CRISPR spacer
aagcaaaaattaatattgataattcttttg	Protospacer
.     *******.*** ***********

14. spacer 5.1|1347585|30|NZ_CP018789|CRISPRCasFinder matches to KU599877 (Flavobacterium phage Fpv1, complete genome) position: , mismatch: 9, identity: 0.7

gtcaccaaattaacattcataattcttttt	CRISPR spacer
aagcaaaaattaatattgataattcttttg	Protospacer
.     *******.*** ***********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1330563 : 1342112

Enterobacteria_phage(60.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086237427.1\|1330563_1331385_-	cytolethal distending toxin subunit B family protein	A5LH53	Enterobacteria_phage	8.5e-64	50.4
WP_086298133.1\|1331381_1332062_-	hypothetical protein	A5LH52	Enterobacteria_phage	1.6e-15	32.4
WP_086298136.1\|1332255_1332696_+	FdtA/QdtA family cupin domain-containing protein	NA	NA	NA	NA
WP_086298140.1\|1332703_1333096_+	WxcM-like domain-containing protein	NA	NA	NA	NA
WP_086298143.1\|1333092_1334181_+	DegT/DnrJ/EryC1/StrS family aminotransferase	E5ES42	Bathycoccus_sp._RCC1105_virus	1.6e-49	36.0
WP_086298146.1\|1334177_1335005_+	glycosyltransferase	K7Z8A5	Megavirus	1.3e-06	27.5
WP_086298130.1\|1335542_1336280_-	hypothetical protein	NA	NA	NA	NA
WP_086237427.1\|1336276_1337098_-	cytolethal distending toxin subunit B family protein	A5LH53	Enterobacteria_phage	8.5e-64	50.4
WP_086298133.1\|1337094_1337775_-	hypothetical protein	A5LH52	Enterobacteria_phage	1.6e-15	32.4
WP_192940174.1\|1337828_1338752_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_192940175.1\|1338778_1339789_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	5.3e-76	47.0
WP_086242668.1\|1339791_1340658_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	6.7e-35	36.7
WP_086242678.1\|1340668_1341226_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.7e-31	41.9
WP_086298156.1\|1341227_1342112_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.7e-97	61.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018789

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection