CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_AP014645	Leptolyngbya boryana dg5 plasmid pLBY	0 crisprs	NA	0	0	0
NZ_AP014642	Leptolyngbya boryana dg5	11 crisprs	cas3,csa3,Cas14b_CAS-V-F,Cas9_archaeal,c2c5_V-U5,DinG,DEDDh,cas4,PD-DExK,WYL	5	6	2
NZ_AP014643	Leptolyngbya boryana dg5 plasmid pLBA	0 crisprs	NA	0	0	0
NZ_AP014644	Leptolyngbya boryana dg5 plasmid pLBX	4 crisprs	PD-DExK,Cas14u_CAS-V,WYL,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csx1,csx18,cas1,cas2	1	66	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP014642_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014642_1

697848-697942

Orphan

Consensus_repeat	Method
CAAGCGACAGGCGGAGCTTCTCGTGGCAGCAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014642_1

>merge|NZ_AP014642|1|697848-697942|CRISPRCasFinder
CAAGCGACAGGCGGAGCTTCTCGTGGCAGCATATTTACGAATCGGCAAAACCGCACTGTCCGTCAAGCGACAGGCGGAGCTTCTCGTGGCAGCAT

>NZ_AP014642|1|1|697848-697942|CRISPRCasFinder
CAAGCGACAGGCGGAGCTTCTCGTGGCAGCAT	ATTTACGAATCGGCAAAACCGCACTGTCCGT
CAAGCGACAGGCGGAGCTTCTCGTGGCAGCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014642.1\|WP_026148961.1\|695042_697580_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227328
NZ_AP014642.1\|WP_017290727.1\|709070_709982_-\|homoserine-kinase	unknown	unknown	gnl\|CDD\|234920
NZ_AP014642.1\|WP_017290745.1\|689025_690255_+\|dihydroorotase	unknown	unknown	gnl\|CDD\|236002
NZ_AP014642.1\|WP_017290728.1\|708553_709030_-\|DUF1499-domain-containing-protein	unknown	unknown	gnl\|CDD\|377828
NZ_AP014642.1\|WP_017290748.1\|686440_686812_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|225861
NZ_AP014642.1\|WP_017290744.1\|690232_690823_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_AP014642.1\|WP_017290747.1\|687060_687459_-\|DUF3110-domain-containing-protein	unknown	unknown	gnl\|CDD\|371489
NZ_AP014642.1\|WP_017290746.1\|687586_688912_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_AP014642.1\|WP_086370973.1\|707565_708477_-\|phosphorylase	unknown	unknown	gnl\|CDD\|226803
NZ_AP014642.1\|WP_017290735.1\|701424_702780_+\|response-regulator	unknown	unknown	gnl\|CDD\|381147
NZ_AP014642.1\|WP_017290730.1\|706668_707535_-\|polyphosphate-kinase-2-family-protein	unknown	unknown	gnl\|CDD\|274737
NZ_AP014642.1\|WP_017290731.1\|705191_706595_+\|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N	unknown	unknown	gnl\|CDD\|214353
NZ_AP014642.1\|WP_017290734.1\|702888_703317_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182473
NZ_AP014642.1\|WP_017290743.1\|690916_692110_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341031
NZ_AP014642.1\|WP_017290739.1\|693381_694905_+\|AMIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|378705
NZ_AP014642.1\|WP_017290733.1\|703815_704676_+\|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein	unknown	unknown	gnl\|CDD\|177011
NZ_AP014642.1\|WP_017290732.1\|704763_705165_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375088
NZ_AP014642.1\|WP_148664725.1\|692734_693166_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173412
NZ_AP014642.1\|WP_017290741.1\|692372_692582_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017290736.1\|698697_701424_+\|CHASE2-domain-containing-protein	unknown	unknown	gnl\|CDD\|226703

Protein	Function_ID	Function_description	E-value
NZ_AP014642.1\|WP_026148961.1\|695042_697580_+\|CHAT-domain-containing-protein	gnl\|CDD\|227328	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown].	4.42974e-143
NZ_AP014642.1\|WP_017290727.1\|709070_709982_-\|homoserine-kinase	gnl\|CDD\|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	1.83202e-129
NZ_AP014642.1\|WP_017290745.1\|689025_690255_+\|dihydroorotase	gnl\|CDD\|236002	PRK07369, PRK07369, dihydroorotase; Provisional.	0
NZ_AP014642.1\|WP_017290728.1\|708553_709030_-\|DUF1499-domain-containing-protein	gnl\|CDD\|377828	pfam07386, DUF1499, Protein of unknown function (DUF1499). This family consists of several hypothetical bacterial and plant proteins of around 125 residues in length. The function of this family is unknown.	2.66404e-52
NZ_AP014642.1\|WP_017290748.1\|686440_686812_+\|VOC-family-protein	gnl\|CDD\|225861	COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only].	3.46216e-36
NZ_AP014642.1\|WP_017290744.1\|690232_690823_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	8.16752e-55
NZ_AP014642.1\|WP_017290747.1\|687060_687459_-\|DUF3110-domain-containing-protein	gnl\|CDD\|371489	pfam11360, DUF3110, Protein of unknown function (DUF3110). This family of proteins has no known function.	9.15577e-41
NZ_AP014642.1\|WP_017290746.1\|687586_688912_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	6.90593e-69
NZ_AP014642.1\|WP_086370973.1\|707565_708477_-\|phosphorylase	gnl\|CDD\|226803	COG4360, APA2, ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Nucleotide transport and metabolism].	2.18606e-92
NZ_AP014642.1\|WP_017290736.1\|698697_701424_+\|CHASE2-domain-containing-protein	gnl\|CDD\|226703	COG4252, COG4252, Predicted transmembrane sensor domain [Signal transduction mechanisms].	7.7066e-111
NZ_AP014642.1\|WP_017290731.1\|705191_706595_+\|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N	gnl\|CDD\|214353	CHL00073, chlN, photochlorophyllide reductase subunit N.	0
NZ_AP014642.1\|WP_017290734.1\|702888_703317_+\|hypothetical-protein	gnl\|CDD\|182473	PRK10455, PRK10455, periplasmic protein; Reviewed.	0.00319717
NZ_AP014642.1\|WP_017290743.1\|690916_692110_-\|MFS-transporter	gnl\|CDD\|341031	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters. Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0.000259469
NZ_AP014642.1\|WP_017290739.1\|693381_694905_+\|AMIN-domain-containing-protein	gnl\|CDD\|378705	pfam11741, AMIN, AMIN domain. This N-terminal domain of various bacterial protein families is crucial for the targetting of periplasmic or extracellular proteins to specific regions of the bacterial envelope. AMIN is derived from the N-terminal domain of AmiC, an N-acetylmuramoyl-l-alanine amidase of Escherichia coli which localizes to the septal ring during division and plays a key role in the separation of daughter cells. The AMIN domain is present in several protein families besides amidases suggesting that AMIN may represent a general targetting determinant involved in the localization of periplasmic protein complexes.	1.22538e-13
NZ_AP014642.1\|WP_017290733.1\|703815_704676_+\|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein	gnl\|CDD\|177011	CHL00072, chlL, photochlorophyllide reductase subunit L.	0
NZ_AP014642.1\|WP_017290732.1\|704763_705165_+\|hypothetical-protein	gnl\|CDD\|375088	pfam17265, DUF5331, Family of unknown function (DUF5331). This bacterial family of unknown function can be found in Cyanobacteria.	3.82044e-25
NZ_AP014642.1\|WP_148664725.1\|692734_693166_+\|hypothetical-protein	gnl\|CDD\|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	5.82412e-08
NZ_AP014642.1\|WP_017290730.1\|706668_707535_-\|polyphosphate-kinase-2-family-protein	gnl\|CDD\|274737	TIGR03709, PPK2_rel_1, polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which. [Central intermediary metabolism, Phosphorus compounds].	2.2981e-165
NZ_AP014642.1\|WP_017290735.1\|701424_702780_+\|response-regulator	gnl\|CDD\|381147	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains. Pseudomonas aeruginosa cyclic di-GMP phosphodiesterase PA4781 contains an N-terminal REC domain and a C-terminal catalytic HD-GYP domain, characteristics of RpfG family response regulators. PA4781 is involved in cyclic di-3',5'-GMP (c-di-GMP) hydrolysis/degradation in a two-step reaction via the linear intermediate pGpG to produce GMP. Its unphosphorylated REC domain prevents accessibility of c-di-GMP to the active site. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.23115e-58

>NZ_AP014642.1|WP_026148961.1|695042_697580_+|CHAT-domain-containing-protein
MMSRSKHRRLLHLCLGVLSLSLAIAITPAQATLQPTPAPIVAAQPATLLDQGRTLYQSGRFAEAVSVWQTAAQQSQAKGDRSNAALSLSYLSLAQQELGQWAEATQSIEQSLSHLKATKPQADAILWAQVLNTQASLLLHTGKAEAALETWKQAQTYYTQAGDTIGSLGSQINQSQALQSLGYYRRAKQQLNEINQQLAKLPDSQVKVSGLRTLGATLQMIGDSTESRKVLEQSLAIAKAKNLKSEISAILAGLGKAATDLNDPDAALAYLEQSEQAAVSPIEKLQARLDRFKLLIDYGLLDQAAPIAPQLLSQLEQLPPNRTSMYGAINFAASLNQLENSEKLLSLNTLSSLLEKTVQSAKSLQDSQAEAYALNQWGKLYGRTEQWAEAETVTQQSLEIARQLQADEIIAQSAWQMGRLKIEQGKTKQAISPYTEAVKSLRAIRGDLAAINPDVQFSFRESVEPVYREFVALLLEGQPGQAELTQARELIESLQVAELDNFFREACLDKTQQIDQVDTTATVVYPIILPDRLAVISSTAGKPLQYHITPISQAEVEETLDQLLAALNPVSNLQARDRVSQQVYDWLIRPIESELKQTKTLVFVLDGKLRNIPMSALYDGKQYLIEKYAVTLSPGLQLMAARSLQQTNIGAIVAGISESRSGFSALPAVETEVKKIAQTVPSSKLLNAQFTGNALSTQLKDSKANVVHLATHGQFSSRLEDTFLLTWDGVVNIKELSELLQSRDASKAIDLLVLSACDTASGDDRAVLGLAGLAVKSGARSTLATLWPVKDKAAATLMTQFYQELGQSRSTKAEALRQAQLHLIRKTDFKDPFFWSGFVMVGNWQ
>NZ_AP014642.1|WP_017290739.1|693381_694905_+|AMIN-domain-containing-protein
MLKKALTFSELISAIVLLTSVSAIAAPLENLRFDPDINQLEVTLAAGIKPTYSLLSKPDRIVLDLPNTQVGQISPQQTFMGAVRQVRVFQFQPDTTRIVLELAPNQTLATQQVQLQQAPSSDKIWILRPTLAARTPSPQTQAVFNSLRPIQTAPLPKTTPIQPAEPKVAQTSATPANDFGLPPAPPAINPDLPPVTPPPATNSAPPAATVPDLPPAQSTPLPPAAGSGNAPTGSSLLFPDAPITPRAVPQSPGLQLPEVNPSLAIPDSFPPINAPTNLPSTPPTVTVPQLDRRSPDPSSIVEPRSTSAPVEDTPVPVRQRTIQFGQPLPTLINQQPPSTPQQISRFANGSSESLLPVGTKLSLFYPGNEPLKLQGNQSRQDVLILQNEIRDRAGRLLVAPGSAVMGKFETDRNGSRFVTIQGQNLAFIGKSDTISGNPQVQDHRLIQNSGLGAIAGAVLGGFSGGNVIGGAALGAGVTYLTASRPATIQPRQLIQIQLTQDFNLFSR
>NZ_AP014642.1|WP_148664725.1|692734_693166_+|hypothetical-protein
MMRLKAISVFAGLALMMGLTACAETEQAAPPAAPTAPAAKPAGTVNKAGESVKKTGDAAKKAGESVKAKAGEAATKAGEAATKAGEAATKAGEAAKTMTGEGVKQAGEAAKQAGEAAKQAGVAAKQAGDAAKEKITQPAEKKQ
>NZ_AP014642.1|WP_017290741.1|692372_692582_+|hypothetical-protein
MQTHFRLICSISTVPGWSVENDAVLISEGLFAIALPLGVCVAIFVQKKRKRRALKQQIEMLEKLWRNKV
>NZ_AP014642.1|WP_017290743.1|690916_692110_-|MFS-transporter
MGEDAKSGLVPNPQPSRFQAWQQVIGLAILLAAVMFTWMIYGVFQPRILSSLGFTALASQLGIYQGLLGAIVEPVVGWKSDQIFRRLNTRFPMVTFGVTLAGLICVSVSVLWQEKAVMLAIRNFVPILTTVWVIAMIIFRGPAIALLRQFTPADFPLANAILTLVFALMGAMSPLVGRLITQWGASATFLLGALSLVVGGLLFKWSQPPLQLAEVTNDPPIPLKKAIAIFWVGLAAGIQSTLLFGYSPQLLHQQIQWLEPAYLTSAILVISAVSALPLEQFALTWGVHRSMLMSFSVIALLLGVLNAPANWLFLVLFGLAFGLLFISQIPYALGAVPSNQAGFGTGLYFGGIGGGSAIVSWALGSQPVSSSIILWGFLATVIGGIGLIGTRRDRNLL
>NZ_AP014642.1|WP_017290744.1|690232_690823_-|signal-peptidase-I
MNRVDNPAPNNKVRQKDENPWLEGLKTIGLSAVLAIGIRQFVAEARYIPSGSMLPTLQINDRLIIDKISYRFNNPQRGDIVVFAPTPALEKQNFHDAFIKRVIGLPGDKVQVKGNRVYVNDQPLRENYIGKDEAPQYEWGPQVIPPDSYLVLGDNRNNSYDSHYWGFVPRDKIIGRAVVRFWPPNRAGEITPEPQY
>NZ_AP014642.1|WP_017290745.1|689025_690255_+|dihydroorotase
MFVLLQQVRSLDPVANVDRITDVLIEDGIIRAFAPSEIPPDTQIQPCAGKILAPGLIDLYSHSGEPGFEERETLTSIEQAAIAGGFTQLNLLPDTHPAIDNPASVTQIRTKFPKVNCWGALTLGTEGQQLTELAELAAAGIIGFTDGKALPNLTLIRRALEYLHPIQKPVALWACDPGLAGKGVIRQGANSMRFGLPGVPTMAESAPLSALLECVAEIGTPVHLMRISTARGVELIRDAKSRGVPVTASTTWLHLLLDTDAVGTYDPNLRLDPPLGNKHDRDALIQAVQDGIIDAIAVDHSPYTYEEKTVAFGEAPPGVIGLELALPLLWSNLVESGRWSALTLWQSLTTRSAQCLNQSFQSKDLILFAPNEKWTVDHSNLRSLSTNTSWLNHSITGRVLEIFNTEALA
>NZ_AP014642.1|WP_017290746.1|687586_688912_+|histidine-phosphatase-family-protein
MTTRVILVRHGESSYNVEKRAQGHCDLSTLTEKGEIMATQVAKALKDLQFDAIYTSPLQRAKRTAEVIFEGLDNPPALQVTDYLKEINVFLWEGMLFSEVQEKYPEMYDYWHTEPHKVRMTLPDGSELAPVQDLYEQAERFWRSTIPHHANQTLLIVAHSGINRALINTAIGLEPADYQRFHISNCGITVLNFSGDFGQTVQIESLNVTSHLGETIPKLRPKHKGARLLLVRHGETEWNRQGRFQGQIDVPLNDNGRVQASQAGEFLKSVSIDSAVSSSMARPKETAELILKHHPDIDLKLRDDLREISHGLWEGKFESEIEADYPGLLEQWQSRPETVQMPEGENLQQVWDRAIAGWNEIVKNAQPGETVLVVAHDAINKAILCYISGLTTASFWNFKQGNGAVSVIDYPKGNDATPLLMAMNITTHLGGVLDKTAAGAL
>NZ_AP014642.1|WP_017290747.1|687060_687459_-|DUF3110-domain-containing-protein
MQVFVLLFNADTDNPGIHTISVGTQNLVLMFAQQDDAERYAMMLEAQDFAVPTVEKIDQEEIEEFCQDAGYEAYLIPENFMPQNEFERLLLAPPEANREETDWSSEDKPEREESELSNGELDRIRRQLEGLL
>NZ_AP014642.1|WP_017290748.1|686440_686812_+|VOC-family-protein
MNSNPVIWFEIYVQDMDRAKAFYESVFQRKLESLNNPDLEMWSFPMQMGSEGAAGALVKMPGVSSGGNSTLIYFSCDDCAVEESRVKEFGGRIQKTKMSIGEYGFISLVADTEGNLFGLHSMQ
>NZ_AP014642.1|WP_017290736.1|698697_701424_+|CHASE2-domain-containing-protein
MRQKIQAFFRRNRSVLIIAPSVAATVTAGQMLGVFNLLEWQVRDQFFRQRSTGEMAKSIVVVTIDEEDIQSVKKWPIPDWSLAQLIEKIRAQKPRAIGLDLYRDLPEGEGHKQLVNVFESTPNLIGVEKITGDRVAPPPALKKKDQVAIADLVLDGDRQVRRALLTSEDSKDQTVKPGLATRVALKYLEAEGTTLDSSDKNPLQYKLGQTVYLPLKDQEAGYSDADVGGYQILLNWHGSEKAFHTVSMRDVLAGRVPADLMRDRMVFIGSIAASTNDFFGTPFSSSWFSAQDPTPGVVVHANIAYQLVNSVKQNNMLHGLTIKKFIAWIFACSLFGTIGSWTLASLPSRQRLPGGKILWATVGTSGAIVSGAYFIFLGGMLIPVTPALASFIASVVATVNSHKHQKLEEANRELESANNQLIDYSKTLETKVEERTRELLEAKQAADSANQAKSEFLANMSHELRTPLNGILGYAQILERSVAPKEQEGIKIIHQCGSHLLTLINDILDLSKIEARKLELDSSSIHLASFLNGVAEICRIRAEQKGIGFQVEIDDCLPIGIVADEKRLRQILINLLGNAIKFTDQGQVTFRALSAQESRIRFEIEDTGVGMSTEQVDKIFLPFEQVGAVERKSEGTGLGLAISQRIANLMGSGIQVQSRLGEGSIFSLEVEFAIASEWNQSTQNLAQTQTVIGIQGQPPVILVVDDDRTQCSMVATLLQEIGFEVKVAYTGSDGWLAIDEDHPDLVITDLAMPLLDGMGLIEQLRSTAETSAIPIIVSSANVFGSNRQRSLDAGANAFLPKPFEVGELLNTLQALLNLTWIYQTQPTESPAQAAPAQGKLVLPAQNVLDDIYHLAMMGDITAIEGILSTLIEEDPCYTTFVAELKKLTATFQAGKIRQFIKSYTKAAH
>NZ_AP014642.1|WP_017290735.1|701424_702780_+|response-regulator
MIPISLVPVRILLVDDTPTNLKVLSEALQGQGWKTLMATDGESAIEQAEYALPDLILLDVMMPGIDGFETCQRLKANAKVQHIPIIFMTALSDSINKVRGLELGAVDYITKPFQQEEVIARVKLHLSISHLNQSLQTKIAEQAETEAQLQQLAQELEQRVRDRTAELEISLHQLKTTQLQLVQSEKMSTLGQLVAGVGHEINNPINFVSGNLKHIDDYTRDLFALIQMYQRKDSAEDIAEFIEDIDLEYVAEDLPKLIKSIHEGVHRLKDISLSLRSFARSDISSKTEFQLREGIESTIMLLKHRLKANEKHPEIQIIRQYAELPPISCYPGQLNQVFMNLIANAIDAFEEKNETRSYAEIVESPNMIWISTEIDRSNQTVLIRVKDNGLGMLPEIQSQIFEPSFTTKPVGKGTGLGLPISRQIVNEKHGGQLECRSIVGEGTEFTISLPI
>NZ_AP014642.1|WP_017290734.1|702888_703317_+|hypothetical-protein
MKKVAILLPGAIALMMAVSPMLAAHARPINRLAQAPKQEYANKLGLTDAQKQSMKSIREAVQKDIYTNVLNDGQRAQYDAAVQRGEKPGKMMRSLNLSDAQKTQIRDKMKAARQKINQEVLTQAQRDQIQQMRQQRRNRRGA
>NZ_AP014642.1|WP_017290733.1|703815_704676_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein
MKLAVYGKGGIGKSTTSCNISVALAKRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQEKDYHYEDVWAEDVIYKGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCMIVTDNGFDALFAANRIAASVREKARTHPLRLAGLIGNRTAKRDLIEKYVDAVPMPILEVLPLIEDIRVSRVKGKTLFEMAESDPSLNYVCDYYLNIADQILANPEGVVPKDAADRDLFSLLSDFYLNPQQPKTAEEELDLMMV
>NZ_AP014642.1|WP_017290732.1|704763_705165_+|hypothetical-protein
MNIDQLRRSLKDRWLDYYEANRSWISRLSIWVSCEGKRRPSSSFILGVLSTEEPRLTEMLPLIVDLSNHPDRIVVALGLNFDPEQELNHKQLKAETPKYLPASSATEAPQKPRRPAEVDEACEGRNRTTPSPQ
>NZ_AP014642.1|WP_017290731.1|705191_706595_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N
MTLADAQPQALNFECETGNYHTFCPISCVAWLYQKIEDSFFLVIGTKTCGYFLQNAMGVMIFAEPRYAMAELEEGDISAQLNDYNELKRLCEQIKRDRNPSVIVFIGTCTTEIIKMDLEGLAPKLESEIGIPIVVARANGLDYAFTQGEDTVLAAMAQRCPTQAPTAEADKEERNAIQKLMNFGRKQEDVKREESEYVDHPPLVMFGSVPDPIVTQLSLELKHQGIKVSGWLPAKRYTELPVIEEGYYVSGVNPFLSRTATTLMRRRKAKLIGSPFPIGPDGTRAWVEKICSVFNIEPKGLEEREAKIWQSVEDYLQLIRGKSVFFMGDNLLEISLARFLIRCGMTCHEIGIPYMDKRYQAAELDFLVKTCQEMGVPVPTIVEKPDNYNQLQRIHELKPDLVITGMAHANPLEARGISTKWSVEFTFAQIHGFGNTRDILELVTRPLRRNGALKDLGWEKLVEEARV
>NZ_AP014642.1|WP_017290730.1|706668_707535_-|polyphosphate-kinase-2-family-protein
MKHDRFIVPANTKINLKDYDPAYTDGLTDKAAAQAELQQGVQRLAKYQDILYAQDSYALLILFQAMDAAGKDSTIKHVMSGVNPQGCQVYSFKSPSSEELDHDYLWRSNRALPERGRIGIFNRSYYEETLVVRVHPELLVHQKLPPEANGKEIWDKRFKQINHFEQYLVENGIVVLKFFLNVSKEQQKKRFLARINEPEKNWKFSVSDAKERQHWDQYMEAFEDVFNNTSTSYAPWYIIPADHKWFTRLAVSDIIVSTLKSLHLSYPTVSEVRRAELLEAKKVLESEE
>NZ_AP014642.1|WP_086370973.1|707565_708477_-|phosphorylase
MNELLHLPLLEHPGTLWQRTIEQTQHALSCGALLSIPTSHEFVEQAGVQFLVRIVSNLIRKEAADLKQKQEEKSGHPINPFLPYERDLFVMDISETHVCLLNKFNVVDNHLLIVTRAFEEQEALLTLHDFTAMWACLSEVDGLAFYNAGKAAGASQRHKHLQLVPFPMEKEIDRVPIDPLIKKVRSRDRITQIPEFSFLHAFARFEPETTPEDILQHYYELLETVGIRSNRVMQSAPYNLLATREWMLIVPRSQPGFGGIGVNSLAFAGALLVQTPEQLETLKQLRPLNFLKNVAVMSSIKTG
>NZ_AP014642.1|WP_017290728.1|708553_709030_-|DUF1499-domain-containing-protein
MRRTFTLILLLSFCWLTSISPAQASLFSFSGSRPTNLGLHNDRLTECPSTPNCVNSFSSDSTHAIAPLKSSNIEKAFADLKQVIESQPRTKIIESTENYLYAEFTSKLMGFVDDVEFYLDKTSKAIQVRSASRLGESDLGVNRQRIESIRTQLSENVT
>NZ_AP014642.1|WP_017290727.1|709070_709982_-|homoserine-kinase
MSITVRVPATTANLGAGFDCLGAALTLYNEFQFSPIDSGLKITATGAEADRVALDSSNMVYQTVVKFFDRVQQSVPAIAIDIKMDVPLARGLGSSATAIVGGLVGANAIAGSPMSQSEIAAFATEIEGHPDNVVPALIGGCRLAASGIDRAWEICDIPWDASIVPIVAIPNFELSTAEARGVLPTEYSRADAIFNTAHLGLFVRGVETGNADWLKAALQDRIHQPYREKLIKGYDAVREAAIAAGAYGVVISGAGSTVLALAHQQCSDSVRFAMEKAWTGLGVGVDAKCLAIDTQGTRIINTL

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Crispr_ID: NZ_AP014642_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014642_2

873753-873853

Orphan

Consensus_repeat	Method
GAAGCGAGAGAACTTGCCGAATTGATGTTGAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014642_2

>merge|NZ_AP014642|2|873753-873853|CRISPRCasFinder
GAAGCGAGAGAACTTGCCGAATTGATGTTGAATTACACCCATCTACATGCCACGGCAGAACTTCCCCAGAAGCGAGAGAACTTGCCGAATTGATGTTGAAT

>NZ_AP014642|2|2|873753-873853|CRISPRCasFinder
GAAGCGAGAGAACTTGCCGAATTGATGTTGAAT	TACACCCATCTACATGCCACGGCAGAACTTCCCCA
GAAGCGAGAGAACTTGCCGAATTGATGTTGAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014642.1\|WP_017290595.1\|867275_870167_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223716
NZ_AP014642.1\|WP_017290593.1\|873863_874529_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187586
NZ_AP014642.1\|WP_017290585.1\|881189_881717_+\|LapA-family-protein	unknown	unknown	gnl\|CDD\|377648
NZ_AP014642.1\|WP_017290603.1\|855711_856068_-\|HetP-family-heterocyst-commitment-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017290594.1\|870332_873326_-\|L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143442
NZ_AP014642.1\|WP_017290598.1\|863518_863896_+\|response-regulator	unknown	unknown	gnl\|CDD\|381093
NZ_AP014642.1\|WP_017290599.1\|862415_863486_+\|response-regulator	unknown	unknown	gnl\|CDD\|381129
NZ_AP014642.1\|WP_017290590.1\|876731_877514_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213228
NZ_AP014642.1\|WP_017290596.1\|864483_867276_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NZ_AP014642.1\|WP_017290592.1\|874771_875242_+\|DUF4385-domain-containing-protein	unknown	unknown	gnl\|CDD\|373016
NZ_AP014642.1\|WP_017290586.1\|880096_881146_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|213890
NZ_AP014642.1\|WP_017290602.1\|856107_857640_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_AP014642.1\|WP_017290589.1\|877521_878676_+\|MCE-family-protein	unknown	unknown	gnl\|CDD\|178642
NZ_AP014642.1\|WP_026148946.1\|861226_861487_-\|photosystem-I-reaction-center-subunit-PsaK	unknown	unknown	gnl\|CDD\|183899
NZ_AP014642.1\|WP_017290588.1\|878672_879053_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367559
NZ_AP014642.1\|WP_017290591.1\|875573_876632_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235316
NZ_AP014642.1\|WP_017290584.1\|881717_882308_+\|shikimate-kinase	unknown	unknown	gnl\|CDD\|234654
NZ_AP014642.1\|WP_017290597.1\|863901_864411_+\|chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|366716
NZ_AP014642.1\|WP_017290587.1\|879794_880034_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017290601.1\|858003_860958_-\|peptidase-domain-containing-ABC-transporter	unknown	unknown	gnl\|CDD\|225183

Protein	Function_ID	Function_description	E-value
NZ_AP014642.1\|WP_017290595.1\|867275_870167_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	3.13286e-159
NZ_AP014642.1\|WP_017290593.1\|873863_874529_-\|SDR-family-oxidoreductase	gnl\|CDD\|187586	cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs. Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.58796e-81
NZ_AP014642.1\|WP_017290585.1\|881189_881717_+\|LapA-family-protein	gnl\|CDD\|377648	pfam06305, LapA_dom, Lipopolysaccharide assembly protein A domain. This family includes a domain found in lipopolysaccharide assembly protein A (LapA). LapA functions along with LapB in the assembly of lipopolysaccharide (LPS). Domains in this family are also found in some uncharacterized bacterial proteins.	0.000105553
NZ_AP014642.1\|WP_017290594.1\|870332_873326_-\|L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|143442	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.	0
NZ_AP014642.1\|WP_017290598.1\|863518_863896_+\|response-regulator	gnl\|CDD\|381093	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains. PleD contains a REC domain (D1) with the phosphorylatable aspartate, a REC-like adaptor domain (D2), and the enzymatic diguanylate cyclase (DGC) domain, also called the GGDEF domain according to a conserved sequence motif, as its output domain. The GGDEF-containing PleD response regulators are global regulators of cell metabolism in some important human pathogens. This model describes D1 of PleD and similar domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.6865e-36
NZ_AP014642.1\|WP_017290599.1\|862415_863486_+\|response-regulator	gnl\|CDD\|381129	cd17602, REC_PatA-like, phosphoacceptor receiver (REC) domain of PatA and similar domains. Nostoc sp. (or Anabaena sp.) PatA is necessary for proper patterning of heterocysts along filaments. PatA contains phosphoacceptor REC domain at its C-terminus and an N-terminal PATAN (PatA N-terminus) domain, which was proposed in a bioinformatics study to mediate protein-protein interactions. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays. Some members of this group may have an inactive REC domain, lacking canonical metal-binding and active site residues.	2.93635e-40
NZ_AP014642.1\|WP_017290590.1\|876731_877514_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213228	cd03261, ABC_Org_Solvent_Resistant, ATP-binding cassette transport system involved in resistant to organic solvents. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.25866e-119
NZ_AP014642.1\|WP_017290596.1\|864483_867276_+\|GAF-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	1.11864e-61
NZ_AP014642.1\|WP_017290592.1\|874771_875242_+\|DUF4385-domain-containing-protein	gnl\|CDD\|373016	pfam14328, DUF4385, Domain of unknown function (DUF4385). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 149 and 163 amino acids in length.	4.33063e-90
NZ_AP014642.1\|WP_017290586.1\|880096_881146_+\|radical-SAM-protein	gnl\|CDD\|213890	TIGR04070, photo_TT_lyase, spore photoproduct lyase. DNA damage to bacterial spores from ultraviolet light accumulates in the form of 5-thyminyl-5,6-dihydrothymine, spore photoproduct. The damage is repaired by spore photoproduct lyase, a member of the radical SAM family of enzymes. The score of this model is set to restrict itself to spore-forming members of the Firmicutes, but additional homologs scoring below the trusted cutoff tend to occur in radioresistant organisms (e.g. Kineococcus radiotolerans) and may be functionally equivalent. A related family in the Mycobacterium lineage is described by family TIGR03886, and may or may not be equivalent in function. [DNA metabolism, DNA replication, recombination, and repair, Cellular processes, Sporulation and germination].	1.16559e-118
NZ_AP014642.1\|WP_017290602.1\|856107_857640_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	8.05904e-52
NZ_AP014642.1\|WP_017290589.1\|877521_878676_+\|MCE-family-protein	gnl\|CDD\|178642	PLN03094, PLN03094, Substrate binding subunit of ER-derived-lipid transporter; Provisional.	2.2936e-41
NZ_AP014642.1\|WP_026148946.1\|861226_861487_-\|photosystem-I-reaction-center-subunit-PsaK	gnl\|CDD\|183899	PRK13214, PRK13214, photosystem I reaction center subunit X; Reviewed.	1.6909e-33
NZ_AP014642.1\|WP_017290588.1\|878672_879053_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|367559	pfam03551, PadR, Transcriptional regulator PadR-like family. Members of this family are transcriptional regulators that appear to be related to the pfam01047 family. This family includes PadR, a protein that is involved in negative regulation of phenolic acid metabolism.	3.13576e-13
NZ_AP014642.1\|WP_017290591.1\|875573_876632_+\|hypothetical-protein	gnl\|CDD\|235316	PRK04863, mukB, chromosome partition protein MukB.	0.00167459
NZ_AP014642.1\|WP_017290584.1\|881717_882308_+\|shikimate-kinase	gnl\|CDD\|234654	PRK00131, aroK, shikimate kinase; Reviewed.	1.27585e-70
NZ_AP014642.1\|WP_017290597.1\|863901_864411_+\|chemotaxis-protein-CheW	gnl\|CDD\|366716	pfam01584, CheW, CheW-like domain. CheW proteins are part of the chemotaxis signaling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and other related proteins that are involved in chemotaxis. The CheW-like regulatory domain in CheA binds to CheW, suggesting that these domains can interact with each other.	3.77351e-20
NZ_AP014642.1\|WP_017290601.1\|858003_860958_-\|peptidase-domain-containing-ABC-transporter	gnl\|CDD\|225183	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms].	0

>NZ_AP014642.1|WP_017290594.1|870332_873326_-|L-glutamate-gamma-semialdehyde-dehydrogenase
MVSQAFGDALGTGSREHYESQTQAIARQLLRATRESRSWFAQVRDQMQWDDKLLGWAMSNPGLRVQLFRLIDCLPALRSKPEIARHLQEYMSDQTVELPAALKGLLNFANADSMPGQLAATTLSTAVETLAHKYISGENLKQVLKTIERLRKEKMAFTVDLLGEAVITEAEAQSYLDRYLELLEQLTEASKSWSKVEQIDFADGQPLPKVQVSVKLTAFYSQFDPLDEAGSQVRVADRARTLLRRAKELGAAVHFDMEQYAYKDLTLETLKALLLEEEFRSRSDVGMTIQGYLRDSQADLQGLIDWAKERGTPITVRLVKGAYWDQETIKAVQKDWQQPVFNDKAETDANYERLTELLLENHEVLNAAIGSHNVRSQAHALAIATALEIPKSRIEFQTLYGMGDKLAKAIVEQGYRVRVYCPYGELIPGMSYLIRRLLENTANSSFLRQNLEERPIEDLIAAPQVGEPSQLKALDKFENAADTDYADRAKRDRIQSALKSVRQQFGQTYLPLINGEFVETAEKLKSENPSRFSETVGTIGLISVDQAEDAIASAKAAFPAWKRTSAQERAHILRKAANLFEQRREELIAWMTYEVGKPVKEGDGEVSEAIDFCNYYADEMERLDRGVDYDFPGETNHYRYHARGIVLVISPWNFPLAIPVGMTVAALVTGNCALLKPAETSSVIAAKIAEILVEAGIPAGVFQFIPGKGHTVGAHLVKHPDVHMIVFTGSQAVGCQIYKDAAVLQPGQKHLKRVVAEMGGKNAVIIDESADLDQAVQGVVQSAFGYSGQKCSACSKAIVLEPVYETFLSRLVEATRSLNIGEAELPGTKVGPVIDKEAQNRIQKFIEWGERAGTLVLKMPVPEGGYFVGPTIITDVSADAKIVQEEIFGPVLAVMRASSFQEALDLANGTPYALTGGLYSRTPSHIEQAQADFEVGNLYINRGITGAIVARQPFGGFKLSGVGSKAGGVDYLLQFLEPRVVTENVQRQGFAPIEGAE
>NZ_AP014642.1|WP_017290595.1|867275_870167_+|hybrid-sensor-histidine-kinase/response-regulator
MAQDKELEIRRQFLDEAQEYLDVLDATILDLANHPIDVAKANAALRAAHSIKGGAGMMGFQVLSELAHRLEDSWKVLKIDKSIVVSPRLENLLLASVGCLRQVVEFDRESMQRHQDSFVDANWLSVEAYPVFDALHAELGDPQEENAASILSPEEGQDIVPLLFETEVEGCLERLETVLNTPDQPCLREEVAILAQELGGLGEMLQLSQFVQLCQSIAYAIEQDSQNTSAIAESALTAWRTAQKLAIAGQYDQIPTAIAESTLPPDLADFADVPSVLEPNVGETDWFTEALAAEALAVDDFQPIPMPTRIPVGEPKGTDFKILDPEPDISTATEAQDTTVRVPVRQLNQLNDSFGELTIDRNGLDLYLKRLRGLARTLHDRVQVLDQVNAKLRTAYDRVTLDGSRSLQDNRRSGFDALELDRYGDLHLLSQQVMETIVQLQEVSEDIDLSLDDADQSARNLTKTAKQLQSGLTQLRMRPISDVINRFPRAIREWSLQYGKEVQLSVVGGSTLIDRNLLEALNDPLMHLIRNAFDHGIEEPTLRALRGKPPQGTIEIQAANQGNRTIITVRDDGEGIPIDKIRDRAEQMGLDPVLLDAARDEELLSLIFEPGFSTSTQVTALSGRGVGMDVVRNNLKQIRGEISVNTQAGQGTTFTLSIPFALSTIKVLLIECHGMLLALPTDVVSELFLLQPNQIIETAGSEVLNWQDKVVQLVRLQKWMRFNCPQIPHGFETPPTIAMTSVVIIDQAPQWFGIQIDRCWGEQEATMRKVEGNLALPTGFSGCTILGDGRVVPLVNVTELLRWITSCERSDIQPDQAFSKQLRASLVASQPSMARSTTPTILVVDDSINVRRFLALTLERSGYRVEQAKDGQDAIERLEAGLSVQAVICDIEMPRLDGYGFLAKLRSDEQLAQIPVMMLTSRSGEKHRKVAENLGAAAYFSKPYNEQVLLRTLEGMVKSTALV
>NZ_AP014642.1|WP_017290596.1|864483_867276_+|GAF-domain-containing-protein
MVDQLNAAQRDQLAQSNTLKPSSIDMPPTPVKRRSLSIPGLARFRRLSLKNKATLIAITIGTLPVLVIGTIAYSFANQSITRQIVDTEETLATTLSQRIASYMSERTADLQILASLPMLTTPGLQDGTSTEEKRILFERAIENGNYESITLFDNDGNALIQTDREPIPRQDDQDYFRAALQSSRVSISRPMRLSPNTAYTIYITAPVQESGSGKRIGILRAVVPIKSLASELQNYNKVGATFSVLDASNQIFLSSQDAKIGQAASSIYSSFSQLQSRREINSSVVTQKLNNESKPVLASFIPWTGRDRLPDLGWDVVLSIPTEIAFAPQRQLLLTFLLGTAVAVFLTGLLAAWLASRATRPIVAATNAVLELGNGRLNTRLAVKGVDEISILGRNINLMAGQLQSLVSQQTENAERSQLLNQITVKIRRSLSVDDILATSVEEIRAAFKTDRVVVYRFAPDYLSGTITAESVGSNWIKALGKVVSDPMEASLVDRYREGRVWSMEDLKQAKLSHCHCEILERLEVQANMVAPIVQNQELIGLLCAHQCSAPRSWKPEEIDFFGQLAVQIGYALDQASLLEQTEDARKSAEQLSEERQQQKEALQMQLINLLADVEGAVEGDLTVRADVTAGEIGTVADFFNSIVESLRQIVTQVKDAASQVNASLSSDEQAVRQLSDEATRQADETSRTLDSVQNMLRSIQTVSNSAQQAASVAREASSTAEAGGIAMELTVQNILGLRDTIGETAKKVKRLGESTQQISKVVSLINQIAMQTNLLAINAGIEAARADEGSQGFAVVAEEVGDLATRSATATREIEQIVATIQRETTEVVEAMEQGTTQVVEGTRLVDNAKQSLEQILEVSRRIDDLVQSISEATVTQVQTSDAVSHLMQEIVAAAGRTSASSMEVSRSLRQTVEVAQELQESVGTFKVG
>NZ_AP014642.1|WP_017290597.1|863901_864411_+|chemotaxis-protein-CheW
MDDSVLTLATTQKNAIAPKNLGESYLKFEVGQGTQVGLPMRHVQEVLVLQPRYLTPIPNLMPGILGLMHRRSRALWVFDLAMLLDIGRLDYSPQQYDLVILRTGSTAVAAAVNRVDGIAWAKPDDLQPVPSHVTKGLIPYSKACILQSQDVIFLLDGEAILQAPLLQSH
>NZ_AP014642.1|WP_017290598.1|863518_863896_+|response-regulator
MSLTLMRTVLVVEDTPSEMELLSHYLREGGYSVVGAVTAKDALTKAIELKPNVIVTDVVMPGMSGFELCRSLKKNPETQKVPIIICTSKGQDIDRLWGMRQGADVYITKPFTREELIRAVQSVGG
>NZ_AP014642.1|WP_017290599.1|862415_863486_+|response-regulator
MVSHRPFQRLQPLSLLAQLISRRVDGCLQIVSGSVSWLLYLDEGTLAFATNSIQPFERLDRVLDQLSDRVPSLIQFDRGQLRQFETVAGTYPAISADYQAIEWLLGQRLIDRSQAAALIELLAIDVIKPFLSVTEGIYEVIAKPNFLHYPNLCQLDLRPIVERCHSELKSHSPAIPKATSPDASIPLPSPVSSAPSARPLSFTTSQPAISQPTQTPVTAVPTGSAPTSSVAATAQVQYKIACIDDSPTVLQAISTFLNDSSVSVIMINDPVKALMQIVRSKPDIILLDVGMPNLDGYELCSLLRRHPSFKLTPIIMVTGHTGFIDRAKAKIAGASGYLTKPFTQSELVKTVFRYLE
>NZ_AP014642.1|WP_026148946.1|861226_861487_-|photosystem-I-reaction-center-subunit-PsaK
MLISTLLAVAPRAVDWSPSVGAVMIICNILAIAFAKYTMKNPSAPPEMPSSNMFGGFGLPAVIGATCFGHVLGAGAILGLSNIGVL
>NZ_AP014642.1|WP_017290601.1|858003_860958_-|peptidase-domain-containing-ABC-transporter
MKKNSEIGRDAPPVNLDSAYELLSEILMTRFSVDPAFSRSFNFRAFQLGDVLNVSHVMILCQGRVRLIRSGVPAAVLDVGDSWGSDGQFCDPVLSYQAIAASAGFVAEIDSIPSELESDLQKMAHDRQRLLFLKSETDLRSHSSHVLKKLLPHLCEIRIAAGSSVADQSGRFWLRQGQVQGTQPPTIGQGWGYPQPVPSDWVAATELQLYQMSANHWDTVFQSEASPEVKPIVQPLARVQPVEAQPVRPIPAPTKPAAIEFAKPRRSRIRIGRAPFIPQQSSSDCGAACLAMIAQYWGKRLSINMLRNLAGVGRSGASLKGLALAAESLGFQARPVRSSFNRMTEQSLPWIAHWQGEHYIVVYRMKRNRVLVADPALGRRSISYEEFQASWTGYALLLSPTQLLKALPKSKPSLGRFLGAFTPYRSIVWSILLASVLLQIFGVVTPLFTQIILDQVVVHKSLPTLQIFIFGLLLFGSWKIGLTCTRQYLLDFFSNQVDLTLISGFIAHALNLPLQFFATRHVGDIVTRVQENHKIQLFLTRQAITAWLDAVMAIVYVGLMLHYNWQLTLLVLGLIPPIIIMTVIASPFLRQMSRQIFHESAKQNSSLVEMLTGISTVKATASERELRWQWEDELTSMFNAQFRGQKLANALQGASTLINLFGSTLLLWYGARLVIADQLTIGQLVAFNMMIGSVITPILSLVGLWDEFQEVLVSIERLDDIFSAQPEESPDQPLLVLPRIRGEVTFENVTFRYHADDSRNILQNISFTARAGDTIALVGRSGSGKTTLANLLQGLYQPTSGRILIDNTDLHHVSPQSLRSQLGIVPQECFLFSGTILDNITLYRPQYRLEDVLKAAKLAEAHAFIQSLPLGYQTKVGERGTMLSGGQRQRIAIARALLNLPRILILDEATSSLDTESERRFQKNLQQISRDRTTFIIAHRLSTVRNADCILVLDKGIIAEQGTHEQLIKQGGLYTQLAQQQLDL
>NZ_AP014642.1|WP_017290602.1|856107_857640_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MSIRIDSLSLEDAPPPTLSSNLETDELSEFAYLYGGTLASTPVMPSAFPDPPASSADSSDPTPPERWSTALQNVLDRPPATFPSRLVAGGVIFCAACVGWATTSQMEEIGRAQGRLVPQGEAYKVHPVVSGKIAQVYVQEGQTVKAGQTIAELDHEIALNRVGALQQEERNYEKELLQIDALIDKTRLEAQTRSTIATAEIRAQEATIAQAQAKLQGQDTTILQTEERATTSQALLAQLQADADSQKERLERLKFLVDQGALAREHLYQAEQHFGDRQRSITQQTGDIQQALAESQKMRSDLQQVVAESRRLRAQLTQKYAEGQTAQIQAQQTIQNLFVQRTQLMAKKQQTEKLIQQANAEMKQLKLQAPVDGIVSALNVSKPGEVVQAGQTVSEIAPQTAPLVLVAALPTREAGFVKPGDKVQVKFDAYPYQDYGIVGGKVVKLSPDIKQDERLGAVYRVEIQLDRHMIQSTPLKAGQTASAEIIVRRRTIAEMLLDPIRQLQKGGISL
>NZ_AP014642.1|WP_017290603.1|855711_856068_-|HetP-family-heterocyst-commitment-protein
MTFQRGSVAQSRNKVMSPEQFKQVVDAITEGRYSWACVLILRFAGYNPVHFIPHRTYSRLLKENRVQTPSRLTQIKDLAYSETVEQPEEVLHGGKLPIWFVNSPPCEQLKAQPVYSIW
>NZ_AP014642.1|WP_017290593.1|873863_874529_-|SDR-family-oxidoreductase
MATYLVTGANRGIGYEYCRQLQAQGHEVIAVCRTASEELRQLGIRVEEGIELTSESAIAELRSRLGEMTIDVLINNAAIAKRIDLSHLDVASIREQFEVNAIAPLRLTHALLPLLKSGSKIALMTSRMGSISDNTSGGSYGYRMSKVALSMAGKSLAHDLKPQGIAVAILHPGLVQTRMTNFTVNGITPETSVKGLLQRIEQLSLDNTGTFWHSNGEVLPW
>NZ_AP014642.1|WP_017290592.1|874771_875242_+|DUF4385-domain-containing-protein
MQEFDYSLDFKAIDFRQHPELYRMGRGEQGVLLVEPYKSEILPHWRFKTPEIARQSADAIYQLFLNYKAQQDFVGMDMARKFLQMGYTRARRYANHKSGRKYDKDAQVVLPRVEDPVKAESAQIFYEKWQLAKTDSLYIELRDRHRKQSAEAQVLD
>NZ_AP014642.1|WP_017290591.1|875573_876632_+|hypothetical-protein
MQSFLSIDDLEAASQETLVLMDTRREIQQRLEQYCNRLEDLKRGFDEKGILEGDTQARNTYEQLVIAIRHYRSQIQNDLPELSRRLIEARQSLEENGENTTDIDFIKQVIEERREEQAQREYEAQMSRHQAEKLTQERHETAEQLLDRIREQTSYYDASYLAMDVYHYREDLKGVDRLDEVVEFLFNRVQELSDKPITLQGTAIQKLKIMDAHARKLWAQAQSEPKAILEKKPKPETDIEEKEQKESYTHLRGKVVVFGGHTTTRTYVKEKLPKVYFVWSTVEDGLLIVDQAVQQIQTADAVLLLTDDTSHAVTRKAMTELRRLKKQPIELHHEGVNTIVEKIAWKLMFKSC
>NZ_AP014642.1|WP_017290590.1|876731_877514_+|ABC-transporter-ATP-binding-protein
MADPLIELKGVSKRFGDNAVLDQVDLTVYRGEALAIIGPSGTGKSTVLRIMAGLLAPDSGEVYIGGKRRKGLIEDAADPLHISMVFQQAALFDSLNVEENVGFLLYQHSRLPRQRIRQLVEERLEMVGLSGISQRFPAELSGGMRKRVSFARAIMANPDNPNDTPDVLLYDEPTAGLDPIASTVIEDLVRSLQCPKRGCQSYVMVTHQESTIRRTADRVLFLHRGQVQWEGKVHEIDTTDEPLIRQFFSGSVEGPIQVLG
>NZ_AP014642.1|WP_017290589.1|877521_878676_+|MCE-family-protein
MRSRTVREGSVGLMILAGVGLFGGLVLWLKGLNPANRSFTVVAEFETINGVQVGSPVRYRGVNVGRISNIAAGANGVEVKLEIAPADLVIPRDSTLSVNQTGLLGETVLDISPLKDLVATAEPGKPLDRDCNRDLILCENSRIQGVMGISTDELIRATIKFADVYSNPQFTGNINALTKNSSVAAAEIAQLSREVTGLVKSARQEVGTFSATARSISNTADRATLTITQINDLIAANRSTLVSTLDNLSATSSELRTSVVRLSPILNRVESSQLINNLETLSANAVQTSANLRDISVTLNNPANITMLQQTLDSARATFENTQKITSDLDELTGDPQLRDNLKRLINGLSGLVSSTQQLQQQADIAQILAAPKPIAYPTPTPSP
>NZ_AP014642.1|WP_017290588.1|878672_879053_-|helix-turn-helix-transcriptional-regulator
MDAQRPFTLQDIYRFFQTPQVIFLNQQLTVCYLLSILVESDSYGTEFVQSLKQNYPGYRLSDTILQSSLRFLEKEGLVSSYWKKPEKRGRPRRMYQLSSSARPQAEELSTLWREYVLNHPIETGDS
>NZ_AP014642.1|WP_017290587.1|879794_880034_+|hypothetical-protein
MSIVVDLEMSDTEYLELLTQGRNPVCEQIYTQQLSSYGFSLIEAKQLAPLFEKADCSIAEKIAVNCALKQVWNHLIKLA
>NZ_AP014642.1|WP_017290586.1|880096_881146_+|radical-SAM-protein
MVASPVLARESKLWMPDRVLFTPAALDEPWGQQILERVQSLDLPIEELPKNRLTGLRGEDDRETYSIAKRTLAIVTAPQSQLKLSPIPPSADWQFHLAEGCPAHCQYCYLAGSLSGPPVIRVYANLPQILDNLARYEHPNRETSYEVSCYTDPLGIEHLTGSLAECIRYFGTRQDGYLRWVSKFSHVEGLLDLPHNGHTRCRVSVNAAPVSQRLEGGTASVEERLQALRRLGLEGGYPLGIVIAPIMPIDDWQAHYTQLLDRMSELIDFDCDLTFELISHRFTPGSKQVLLSWYPNTKLDLDESARVVKRNKFGGMKYVYDAKTMRELRQFFERELARRFPHGKILYWT
>NZ_AP014642.1|WP_017290585.1|881189_881717_+|LapA-family-protein
MALLRFVFILAVAGILVIFTLSNSTVPMSIVFLGVRSPTMPLSLWILGAIALGIATTIIINFLFGLTRFAARRSERKTVRQSTKPAGVYTYGQQSPPSKSEDADDWFSDGSDDWGETPRNRPRQEFEKRQEPTTETRSGSSYSYTYREPTTPPDVVDADYKVIKPPTRNLDEEEF
>NZ_AP014642.1|WP_017290584.1|881717_882308_+|shikimate-kinase
MLNGVSVFLIGMMGVGKTTIGQLLAQRLNYEFLDTDMFIEQATGQSVSTIFAESGESIFRQLETATLSQVSSRLRKVVATGGGIVVAPDNWSYLKHGVIVWLDLPVEQIQKRLSDDTTRPLLQQQDLGSRLNQLLSERRSRYAQADIHILIQPDETPDQITERVLRAIAQECDRKRQMDEAIQQLNKEMPFQTNAD

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Crispr_ID: NZ_AP014642_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014642_3

1946601-1947157

TypeV-U5

Consensus_repeat	Method
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAA	PILER-CR
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	CRISPRCasFinder
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	CRT

7 spacers

c2c5_V-U5

The CRISPR arrays of NZ_AP014642_3

>merge|NZ_AP014642|3|1946601-1947157|PILER-CR,CRISPRCasFinder,CRT
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAGATTCGGAAACTCCCTGCACAACTCGGCAAATGCCCGGTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAGTCCCCTTAACTAGGCATGATATGCGATCGCTGCTTAGGTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAGGCTAGGAATTTATCTGAAAGATATCCCTCGACTGCGGTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAGGAGAAGCCAAACAGACTTAAGCCTGCACAAGCAATTCACTCAAGTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAGAAAGTATGAGAAAGTTTCTGACGCAATATCAGAGAACGTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAGCTCAGTCGAAAGTATTGCTGAGGCGTTGGGGATAAAGTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAGGGCAAGGTTATTGCCGTCAACGAGCAGTATCAACATGTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAGA

>NZ_AP014642|3|1|1946601-1947156|PILER-CR
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAA	GATTCGGAAACTCCCTGCACAACTCGGCAAATGCCCG
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAA	GTCCCCTTAACTAGGCATGATATGCGATCGCTGCTTAG
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAA	GGCTAGGAATTTATCTGAAAGATATCCCTCGACTGCG
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAA	GGAGAAGCCAAACAGACTTAAGCCTGCACAAGCAATTCACTCAA
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAA	GAAAGTATGAGAAAGTTTCTGACGCAATATCAGAGAAC
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAA	GCTCAGTCGAAAGTATTGCTGAGGCGTTGGGGATAAA
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAA	GGGCAAGGTTATTGCCGTCAACGAGCAGTATCAACAT
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAG

>NZ_AP014642|3|3|1946601-1947157|CRISPRCasFinder
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	ATTCGGAAACTCCCTGCACAACTCGGCAAATGCCCG
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	TCCCCTTAACTAGGCATGATATGCGATCGCTGCTTAG
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	GCTAGGAATTTATCTGAAAGATATCCCTCGACTGCG
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	GAGAAGCCAAACAGACTTAAGCCTGCACAAGCAATTCACTCAA
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	AAAGTATGAGAAAGTTTCTGACGCAATATCAGAGAAC
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	CTCAGTCGAAAGTATTGCTGAGGCGTTGGGGATAAA
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	GGCAAGGTTATTGCCGTCAACGAGCAGTATCAACAT
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAGA

>NZ_AP014642|3|1|1946601-1947157|CRT
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	ATTCGGAAACTCCCTGCACAACTCGGCAAATGCCCG
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	TCCCCTTAACTAGGCATGATATGCGATCGCTGCTTAG
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	GCTAGGAATTTATCTGAAAGATATCCCTCGACTGCG
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	GAGAAGCCAAACAGACTTAAGCCTGCACAAGCAATTCACTCAA
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	AAAGTATGAGAAAGTTTCTGACGCAATATCAGAGAAC
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	CTCAGTCGAAAGTATTGCTGAGGCGTTGGGGATAAA
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAAG	GGCAAGGTTATTGCCGTCAACGAGCAGTATCAACAT
GTTTCATCCAGGTTTGCGGCAAGGGGGCGATTGAAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014642.1\|WP_017289525.1\|1953407_1953758_+\|50S-ribosomal-protein-L17	unknown	unknown	gnl\|CDD\|235522
NZ_AP014642.1\|WP_017289539.1\|1937345_1938560_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_036044772.1\|1952427_1953399_+\|DNA-directed-RNA-polymerase-subunit-alpha	unknown	unknown	gnl\|CDD\|235359
NZ_AP014642.1\|WP_017289534.1\|1944258_1946169_+\|hypothetical-protein	c2c5_V-U5	-	unknown
NZ_AP014642.1\|WP_086370989.1\|1938574_1941541_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|378942
NZ_AP014642.1\|WP_144056379.1\|1932353_1936058_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|350195
NZ_AP014642.1\|WP_144056240.1\|1942960_1943620_-\|PD-(D/E)XK-nuclease-family-protein	unknown	unknown	gnl\|CDD\|273040
NZ_AP014642.1\|WP_017289542.1\|1930949_1932359_+\|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|238192
NZ_AP014642.1\|WP_026148794.1\|1950991_1951222_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_AP014642.1\|WP_071596180.1\|1951304_1951418_+\|50S-ribosomal-protein-L36	unknown	unknown	gnl\|CDD\|179039
NZ_AP014642.1\|WP_051077881.1\|1943755_1944007_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_026148796.1\|1930334_1930850_+\|TniQ-family-protein	unknown	unknown	gnl\|CDD\|377670
NZ_AP014642.1\|WP_017289528.1\|1951514_1951898_+\|30S-ribosomal-protein-S13	unknown	unknown	gnl\|CDD\|235358
NZ_AP014642.1\|WP_017289540.1\|1936880_1937345_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017289532.1\|1947846_1948635_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017289527.1\|1951976_1952372_+\|30S-ribosomal-protein-S11	unknown	unknown	gnl\|CDD\|180007
NZ_AP014642.1\|WP_144056241.1\|1941656_1942904_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017289530.1\|1949357_1950668_+\|cytosine-deaminase	unknown	unknown	gnl\|CDD\|236062
NZ_AP014642.1\|WP_017289531.1\|1948631_1949255_-\|precorrin-8X-methylmutase	unknown	unknown	gnl\|CDD\|180325
NZ_AP014642.1\|WP_017289524.1\|1953759_1954602_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577

Protein	Function_ID	Function_description	E-value
NZ_AP014642.1\|WP_017289528.1\|1951514_1951898_+\|30S-ribosomal-protein-S13	gnl\|CDD\|235358	PRK05179, rpsM, 30S ribosomal protein S13; Validated.	2.13477e-77
NZ_AP014642.1\|WP_036044772.1\|1952427_1953399_+\|DNA-directed-RNA-polymerase-subunit-alpha	gnl\|CDD\|235359	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional.	2.33503e-151
NZ_AP014642.1\|WP_086370989.1\|1938574_1941541_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	1.02784e-44
NZ_AP014642.1\|WP_144056240.1\|1942960_1943620_-\|PD-(D/E)XK-nuclease-family-protein	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.74125e-05
NZ_AP014642.1\|WP_017289542.1\|1930949_1932359_+\|DNA-(cytosine-5-)-methyltransferase	gnl\|CDD\|238192	cd00315, Cyt_C5_DNA_methylase, Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability.	2.44432e-53
NZ_AP014642.1\|WP_026148794.1\|1950991_1951222_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	4.77311e-47
NZ_AP014642.1\|WP_071596180.1\|1951304_1951418_+\|50S-ribosomal-protein-L36	gnl\|CDD\|179039	PRK00465, rpmJ, 50S ribosomal protein L36; Reviewed.	5.60029e-12
NZ_AP014642.1\|WP_017289525.1\|1953407_1953758_+\|50S-ribosomal-protein-L17	gnl\|CDD\|235522	PRK05591, rplQ, 50S ribosomal protein L17; Validated.	1.1035e-57
NZ_AP014642.1\|WP_026148796.1\|1930334_1930850_+\|TniQ-family-protein	gnl\|CDD\|377670	pfam06527, TniQ, TniQ. This family consists of several bacterial TniQ proteins. TniQ along with TniA and B is involved in the transposition of the mercury-resistance transposon Tn5053 which carries the mer operon. It has been suggested that the tni genes are involved in the dissemination of integrons.	4.19237e-09
NZ_AP014642.1\|WP_144056379.1\|1932353_1936058_-\|AAA-family-ATPase	gnl\|CDD\|350195	cd18808, SF1_C_Upf1, C-terminal helicase domain of Upf1-like family helicases. The Upf1-like helicase family includes UPF1, HELZ, Mov10L1, Aquarius, IGHMBP2 (SMUBP2), and similar proteins. They are DEAD-like helicases belonging to superfamily (SF)1, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF2 helicases, SF1 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	7.10404e-24
NZ_AP014642.1\|WP_017289527.1\|1951976_1952372_+\|30S-ribosomal-protein-S11	gnl\|CDD\|180007	PRK05309, PRK05309, 30S ribosomal protein S11; Validated.	2.8116e-83
NZ_AP014642.1\|WP_017289530.1\|1949357_1950668_+\|cytosine-deaminase	gnl\|CDD\|236062	PRK07583, PRK07583, cytosine deaminase.	0
NZ_AP014642.1\|WP_017289531.1\|1948631_1949255_-\|precorrin-8X-methylmutase	gnl\|CDD\|180325	PRK05953, PRK05953, Precorrin-8X methylmutase.	1.92426e-134
NZ_AP014642.1\|WP_017289524.1\|1953759_1954602_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	1.23118e-118

>NZ_AP014642.1|WP_017289534.1|1944258_1946169_+|hypothetical-protein
MSVITIQCKLVATEETRRALWHLMAEKHTPLINELLKHIAQDSRFEEWSLTGKLPRLVVSEACNQLKQDPQFSGQPGRFYSSAISTVHRIFLSWLALQTRLRNQISGQTRWLAMLQSDNELTIASQTDINTLRLKASELLTHLNEPISESDQPEVKKTRSKKKNQTSNQAGANVSRTLFKLYDETEDPLTRCAIAYLLKNGCKLPDQNENPEKFIKRRRKTEIRLERLMNTFQTTRIPRGRHLSWHSWIEALETATSHIPENEEEAAGWQARLLTKPAILPFPVNYETNEDLRWSLNSQGRICVSFNGLSEHFFEVYCDQRDLHWFNRFLEDQETKKASKNQHSSSLFSLRSGQIAWQEGKGDAEHWVVHRLVLSCSIETDTWTQEGTEEIRQKKASDCAKVIASTKAKENRSQNQDAFIRRRERMLELLENQFPRPSYPLYQGQPSILAGVSYGLDKPATLAIVNIQTGKAITYRSIRQILGKNYKLLNRYRLNQQRNAHKRHNNQRKGGSSQLRESNQGQYLDRLIAHEIVAIAQEYQVSSLALPDLGDIREIVQSEVQARAEQKILGSIEQQRKYARQYRASVHRWRYAQLTQFIQSQAAQVGISIEITKQPLSGTPQEKARNLAIAAYQSRK
>NZ_AP014642.1|WP_051077881.1|1943755_1944007_-|hypothetical-protein
MEIDEFLNNWDVSREELAFICDCSLTTVNHWFSQGEHRRIPTDKHKQRLALAHHIWITIESEPEYLQTLRQMYHKQRRREEKE
>NZ_AP014642.1|WP_144056240.1|1942960_1943620_-|PD-(D/E)XK-nuclease-family-protein
MNICEQKAIPSIWVTWLSRLMADESQCVWSVWFRTHFKYEKLNTNFDSAKWNANHRVLVNDRINILETEGYTVYVEGENRFEVLGRAHLVKVAGKPDIIAIKDDYAWVEDCKTGQRKNSDFYQILIYLLLLPVSLAPCQGLSLKGRLIYSDEVVEIQAEQVNENFREQFRAAIAILSSSIPARKVPSFQECRFCDISTAYCPERSENHLEQNSSEHGLF
>NZ_AP014642.1|WP_144056241.1|1941656_1942904_+|hypothetical-protein
MMFPGWEVTRMIPSDVIMGLITGQYKAYGGVIRWAAGTGHGGQIVRHILPASSQVLNLIPGLNFIPGIVNSMQMSDLKDTVQQNTVLLTQLSSQVGSLSQTTQQVLQIATGTAVLSGLGLVVSSVGFIAINNKLSKIDDRLKSIQKDIQDIQHFLASNERAKLFASLDALTKLDKTPIDHRYTILHDSRRTLSEINMRYRELLLSATTIETAMAYEEYFTLTALAQARCSAELGMLDVAQHEIQETNQIWQTQGRRIAKEILVGEYPERFLASDFVDAVSVAELVEWLDFANEETKRYSWIDDLRRKVDETWYSTGWIPVLHGGSGLNKNIGIGLEKERTMIIPSLRKLAARSNVLEGYVAQYDLLVSHDLTPTEFEHKVAALPESSAVDGYFILEPTEKATPKRLPFQIPMKTR
>NZ_AP014642.1|WP_086370989.1|1938574_1941541_+|tetratricopeptide-repeat-protein
MTELSAPEPMDNFNELLEQGIKALEHDNYERALWFLDKAILLNPHNHKAWNSLGNSLYYLKRYQKALISFEQSIKIKPDSYNPWNGRGNALRELGRCKEAIDSYDQSIRLNPDDREPWNGRGNALYDLGHYKEAIDSYNQSIKLSSDYYNPWNGRGNALRELGHYKEAIDSYNQSIAFKPDYYNPWNGRGNALYDLGHYKEAIDSYNQSIAFKPDYYNPWNGRGNALYDLGHYKEAIDSYNQSIAFKPDYCDPWNGLGNALRELGRYKEAIDSYNQSIKLEPNYCQPWTGRGNVLYDLGQYRESISSYERSIALKPDYCNPWNGRGNALRELGLYQEAMRSYKQAIALKSDYYYSWNGRGNVFYSLKDYGEAITCYDQAIAYSQGQFWQAWDNRGLAILELQGDDKLALTVWDEGIQAILPDSSAYPYGIAMLHRRKAKTLYNSSQNQPSPFQNWLRARENYQKAIDLLPLLDYPKLHLELWQDFLKICQQLGDQRTIQAALQEASAKLQRLLDDPDRSLGEKISLERRFESFKQIQIDSLAQQDPIAAIELAETCKNRCLWRLREDWKASTPNTSYTEIQSLLNETTAAIYWHRSPAAITTFILHHNQPPKILPLTSPKTSSLKPGQQPYPAAAHQLAQFEAWLQQWTALYQNYNYENGKTDPWRQNMELLLFNKLRKILEINSLCKELQPIQTLILIPHRDLHLLPLQSLFPGKFRCTMLPSARLALDHLPTSPLPHSPTLTSIEDPPTHYTKRQSKTPKKMLYAELESTLISTFFSTHSLTSDQATRTALQIHLTQPADFFHFTGHAYHNFDDPLDSALALAGTELLTLRDIFQLNLNPYRLVCLSACETGLTRQRDLTDEYVGLVAGFLKAGVNFVISTLWIVDEISSALFMIRLYENLRRSLSPIDAFREAQTWLKSDYATLIPWYNALSDRLPNHSGHAETLKDAAHLALKDAAIKGMSHRPFEHPYHWAGFMLTGYEVTSP
>NZ_AP014642.1|WP_017289539.1|1937345_1938560_+|hypothetical-protein
MAHLIYPHLCLFSYVLRDETQDSDERESFQKDLIAGTVYRYGRGDTEQYLITSAIEKQESQSLDNLKLLKEIVLAKTGSCDRELGRSWLVFGVLPEGEDPQNIVRSSCEILGIENLSDSADQWQGAKIFECGLENQHGIVALYSSLDEMKAIAGEALQEWLYLLQFRHKVNWAYGNTRQIKPLLSQHLFPKPSSIMSLTMQDVEVSELDLQNLTQDLKQNLTLLSQYTECLSFLEFQLETVKTNLENYRSRLSSMSAKGSHSFQKLSQFEQIGSRDVRQIERDIATLTIGLRVREKTTDTIRGLVELEQAERDRRLEAQSQKFQDSIAVLGVGVGSVAITASFAAAKLEDASIVQSVVKVVPAPMRVSPWTEGAIGVLMCSAIGILFAVLIRVWLFFGKGRKSR
>NZ_AP014642.1|WP_017289540.1|1936880_1937345_+|hypothetical-protein
MLDIYSKLFPMQETDARSLRAALAAIAESPNALDPEMIQTLNQVAIELKDQPASAIAKLRQVMKASALKSLYEEARQELLAGYQSQPRGKEIQIPPNQSPKPGENEIENLSVPLDRIAAAQEILAAKNPSERAQEERAKIANNGKFWEWVIYLI
>NZ_AP014642.1|WP_144056379.1|1932353_1936058_-|AAA-family-ATPase
MLSALLESHPLFIGGYRITSEDIECVVARIQEDNNLSQDILALAPLNLETEEADIRRLIAPGGSLERIVNSDLADLDYQIESKCDDCVFSVHCLTESARERRLELLGLEPSVIRSLRNAGINSIDDLAELDLAGGQAITLRQDPSYSGNLELMRLHAQARRKTLPGGDTHPDEYEVISLPNTGQGQLPQHETSDGRRLIRIYLSIDYDYVENRIGALAAHVTNSNWQLHTGWLDGDPDPETGLVRRVPNHVIQEQNRQNEIGRDGNNRPIYEERPLLSRDVIHFKNDPWTGDYVTDTSAERTLIQSFLSELVDAIADVAELDEAPIHYYIWSRSDMAQLVEGCSRASSRLLASLRELLGCRDHLEQLIYSCLQEEVDQRFALGWTSRGLSVAASLKWFGNTYHWQRRVSGRPISLHQEFTQDIFDFKTDLWIDPSVPAWTEEGDGIRHKFEIRSRFHDSLTAPYWRAFWRSLPNPSAIRDARVRRAINSYNNAQRPNNLREYLRARVHALRWIEERIRFKNPEISKPNVIIANLPDFNLGVNDTARAALDFLKLDQHINLTSWIAEHLVPPLYRISTGKTIPLRNIVSLGQVDDSCQLTANLDLTDFDINLEAFRNNCNLGPGAFVRLSPFSEARRGQTFRQLMIGGITCTLQNLDWDSGEVSLSVVRFRGSDLYRLGSRVPERGPLFDRATLDESPSDFVAPRVDNRLQTVINSHVYQWFHPELSQIPAQIDIAPAMIEQYQEILRTLRLRRGRQLAQEQREAATEGLRTRIQLLQGPPGTGKTETTAASTLLRILARRTVRTEGKNQYGEIVVIAAHTHTAVNNLLQRIHSVLPHFIDAASESGLRMPPVRLAKVVSRDEDEVPGGDIPNIPSEPSLKVFQPFRENSVLIIGGTTGAILKLAKKLEGFSSFKGFPISTLIVDEASMMVFPHFLALTTLVGTDGEIMLTGDHRQLSPIVAHDWENEDRPPVVAYQPYVSAYQAVLNIKQNLGVPDSQILCSALSFTFRLPPLIRELVARLYVRDGIHLTGPERNSSPGIVPVTAWEKLWSASTGLYLVLHSERRSRKNNETEVAIVEQILEANYAAIPENSVAIVTPHRAQKALLNSGLTNYRNIVDVVDTVERLQGGERPTVIVSATASDPSAISKNVEFILDLNRSNVAFSRAQERLIVVCSSSLLDHIPADLEHYESAMLWKSLREICSQEVACETVNGHTVQIFTPPDALPEAIVEEEL
>NZ_AP014642.1|WP_017289542.1|1930949_1932359_+|DNA-(cytosine-5-)-methyltransferase
MRLSFVDICAGLGGFHKALSSFGFECVFASEINEELRENYKKNFPSVAHLTYGDIREAKNLVPKHDILCAGFPCQPFSKSGHQRGFNDPTEGTIFHEILEILEKCRPKYLFLENVGNFERHDSGRTWSIVKTRLERIGYSVRGTTHVGSGGPGLFSPHHLGFPHCRERFFIVGVLNEELPENPFPAKNIQPLIPLEKYIKLNKNLSQQERKETSLSDQQRECINHWNQLIKNLPEKTVSLPSFPIWGDEFEATYPFESYTPYAATIRELRACLNAYSLKKRMSKDELLALLPSYAQTPESHFPNWKVRFIRQNREWFHKYSRFFTREWLDDLSQFPPSLRKLEWNCQGEERNLWQHILQFRPSGLRVKRYSSIPSLVAMTETQIPILGPKKRFLSRSEGLLLLGLPEEHILPETRERAFKALGNGVHVEVVKAIVESVLSYTAFSINRGKQSKNLILNLGGDQDIEIAS
>NZ_AP014642.1|WP_026148796.1|1930334_1930850_+|TniQ-family-protein
MEHSEIQPWFFHVEALEGESISHFLGRFRQANELTPSGVGKISGLGGAIARWEKFRFNPYPTQQQFEKLSTATGISVEQLWKMMPPEGVGMQLEPIRLCASCYAELPCHQIQWQFKDTQGCEVHGLRLLSECPNCKARFKPPATWSDSKCHRCFMLFSEMRNRQKRHSFSR
>NZ_AP014642.1|WP_017289532.1|1947846_1948635_+|hypothetical-protein
MLVPLSRKKFEDLIPLVGTGAQYKYYWGKLSDVLRRVLISISAVAGALLIRAFFATGELQDVVQAVTFFLIILALVYWLWSPAIQAAVRNAGYRRYKYAGFLRGEVLDVFVTDELVGTEESVNNRGELVVTENRERRINVVVGDETGFETRIQVPLKREHQAIRIGDTAEMLALSDRPDLGRIAKVSDIFVSRVGVWVSDYPYLRRDEFEAVSRQINTIEPEDDYREPPRSKRNERRWDEEYDEPRPRKRIPKSKRRSSDWD
>NZ_AP014642.1|WP_017289531.1|1948631_1949255_-|precorrin-8X-methylmutase
MEWHPTDAQSLALIDREVGDHMLSPAEYEIVRRVIYATADFDYKSLIHFSDLALQSGAAALAARTTIIVDVPMVQVGINTNIQNTFANPIYCSMEAITRPQKEKTRAAWGIETLARRYPEGIFVVGQSQTALITLAALIQKEEIKPTLVIATPSGFLDIEAAKARLSNALVPNICTQGRKGNAVVAAAIVNSLVDLAWQAYGGDNAV
>NZ_AP014642.1|WP_017289530.1|1949357_1950668_+|cytosine-deaminase
MIFDAHHYWIRNAHVPASLVVNGNKWATRKPPTDHLLHVDLEIVEGVISAILAAGTYQNYVYPSIDLQGGMIWACFADLHTHLDKGHIWNRAPNPDGTFESALNTVRVDAQKNWNPDDIYRRMEFGLKCSYAHGTKAIRTHLDSAGKLGEMSFEIFRALRDQWADRIILQAVCLVSLDYFLTPEGEKLADLVAESDGILGGVSFINPDIDQQIDRIFSMAKDRKLNLDFHVDENNDPDSNTLRRIAEAAIRHRYRNKTVCGHCCSLAVQDAAEAETTIALVKKAGIGVVSLPMCNLYLQDRTPNRTPRWRGVTLLHELKQAKVPVAIASDNCRDPFHAYGDHDALEVFSQSVKIAQLDRPFGDWANAITSTPADLMGLPNVGRIGVGLPADLVLFKARNYGELLSRSQHDRIVLRNGKAIDTTLPSYAELDDLAKP
>NZ_AP014642.1|WP_026148794.1|1950991_1951222_+|translation-initiation-factor-IF-1
MSKQDLIEMEGTVVDSLPNAMFRVDLDNGFNVLAHISGKIRRNYIKILPGDRVKVELTPYDLTKGRITYRLKNKGR
>NZ_AP014642.1|WP_071596180.1|1951304_1951418_+|50S-ribosomal-protein-L36
MKVRASVKRICEKCRVIRRKGRVMVICENPKHKQRQG
>NZ_AP014642.1|WP_017289528.1|1951514_1951898_+|30S-ribosomal-protein-S13
MARIAGVDLPRDKRVEIGLRYIYGIGPTRSKEIIAKTGVNPDTRVKDLSEADVAALREAVEGGYQIEGDLRRFESMSIKRLMDIGCYRGRRHRMGLPVRGQRTRTNARTRRGGRRTVAGKKKAPGKK
>NZ_AP014642.1|WP_017289527.1|1951976_1952372_+|30S-ribosomal-protein-S11
MARQPQRKTGPRKAKKNIPSGVAHIQSTFNNTIVTISDTQGEVISWASAGSSGFKGAKKGTPFAAQTAAEAAARRAIDQGMRQLEVMVSGPGAGRETAIRALQGTGLEITLIRDVTPIPHNGCRPPKRRRV
>NZ_AP014642.1|WP_036044772.1|1952427_1953399_+|DNA-directed-RNA-polymerase-subunit-alpha
MSSARKKEGYSVAQFQVECIDTSTEEDQSQYSKFVLEPLERGQGTTVGNALRRVLLSNLEGAAVTAVRIAGVTHEFATIPGVREDVLDILLNMKKLVFRTYSSQPQIGRLLVQGQSTVTAENFDLPSEVELVDPTQYIATLSPNATLEMEFKIEKGKGYRGAGKFTDDTALDFLQIDSVFMPVRKVQYSVEDARQGGTAEKDRLIMEIWTNGSLTPQEALSQAANILVDLFNPLKDITFEPSDDDGMSDERIENQIPIEELQLSVRAYNCLKRAQINSVADLLDYSQEDLLEIKNFGAKSAEEVVEALQQRLGITLPQEKSKS
>NZ_AP014642.1|WP_017289525.1|1953407_1953758_+|50S-ribosomal-protein-L17
MRHGCKVPLLGKPADQRKALLRALTTELIRNGRIKTTKIRAQAVRSEAEKMITLAKDGSLAARRQAMGYIYDKQLVHALFENAPERYADRQGGYTRILRTVRRRGDNAEMAIIELT
>NZ_AP014642.1|WP_017289524.1|1953759_1954602_+|tRNA-pseudouridine(38-40)-synthase-TruA
MAPAQPSLQRIALLIQYLGTRFYGWQRQPNHRSVQEEIETAIASVVGYPVVIHAAGRTDTGVHAAAQVAHFDVMTLIPAHRWADVINARLPDDVLIRASAQVPADWHARFSASWRRYRYTIYTEARPNLFARSLSWHYYHAPLDESKMQQALAPMIGRHHMSAFQRANSSRPHAWVDLQFAECVRQDSFLYIEVQASGFLYGMMRLLVGLLVEVGRGDRSVESFTQLWQNERRHEVRYAAPPQGLCLLRVGYPDMPFPPELWFDAQPKLNLSRMTLEPSL

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Crispr_ID: NZ_AP014642_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014642_4

2689193-2689273

Orphan

Consensus_repeat	Method
CGAGGAATCTGTTGCGGCAGAGACCGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014642_4

>merge|NZ_AP014642|4|2689193-2689273|CRISPRCasFinder
CGAGGAATCTGTTGCGGCAGAGACCGTAGAGAAGGTTTCAGAAGACTCTATCATCGAGGAATCTGTTGCGCCAGAGACCGT

>NZ_AP014642|4|4|2689193-2689273|CRISPRCasFinder
CGAGGAATCTGTTGCGGCAGAGACCGT	AGAGAAGGTTTCAGAAGACTCTATCAT
CGAGGAATCTGTTGCGCCAGAGACCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014642.1\|WP_017288826.1\|2696270_2697365_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379062
NZ_AP014642.1\|WP_017288838.1\|2685857_2686604_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|316044
NZ_AP014642.1\|WP_017288825.1\|2697605_2698004_-\|response-regulator	unknown	unknown	gnl\|CDD\|381100
NZ_AP014642.1\|WP_017288823.1\|2701192_2701528_+\|cation:proton-antiporter-subunit-C	unknown	unknown	gnl\|CDD\|236258
NZ_AP014642.1\|WP_026148721.1\|2685263_2685521_-\|TIGR03643-family-protein	unknown	unknown	gnl\|CDD\|378528
NZ_AP014642.1\|WP_017288836.1\|2687278_2687725_-\|diacylglycerol-kinase-family-protein	unknown	unknown	gnl\|CDD\|260134
NZ_AP014642.1\|WP_017288827.1\|2693807_2696264_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379062
NZ_AP014642.1\|WP_017288840.1\|2683873_2685184_-\|aminopeptidase-P-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|182804
NZ_AP014642.1\|WP_026148720.1\|2688407_2688599_-\|DUF3285-domain-containing-protein	unknown	unknown	gnl\|CDD\|314535
NZ_AP014642.1\|WP_154660834.1\|2700777_2700942_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017288824.1\|2698162_2700739_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_AP014642.1\|WP_017288831.1\|2689667_2691035_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_AP014642.1\|WP_017288835.1\|2687913_2688408_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|234575
NZ_AP014642.1\|WP_017288841.1\|2683472_2683778_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017288842.1\|2682860_2683415_-\|thylakoid-membrane-photosystem-I-accumulation-factor	unknown	unknown	gnl\|CDD\|379034
NZ_AP014642.1\|WP_026148722.1\|2682170_2682782_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017288830.1\|2691208_2691427_+\|DUF3148-domain-containing-protein	unknown	unknown	gnl\|CDD\|371482
NZ_AP014642.1\|WP_017288828.1\|2692460_2693765_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_AP014642.1\|WP_017288829.1\|2691506_2692457_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_AP014642.1\|WP_017288837.1\|2686627_2687224_-\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|235552

Protein	Function_ID	Function_description	E-value
NZ_AP014642.1\|WP_017288826.1\|2696270_2697365_-\|ATP-binding-protein	gnl\|CDD\|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	0.00102922
NZ_AP014642.1\|WP_017288838.1\|2685857_2686604_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|316044	pfam13483, Lactamase_B_3, Beta-lactamase superfamily domain. This family is part of the beta-lactamase superfamily and is related to pfam00753.	3.00261e-66
NZ_AP014642.1\|WP_017288825.1\|2697605_2698004_-\|response-regulator	gnl\|CDD\|381100	cd17548, REC_DivK-like, phosphoacceptor receiver (REC) domain of DivK and similar proteins. Caulobacter crescentus DivK is an essential response regulator that is involved in the complex phosphorelay pathways controlling both cell division and motility. It localizes cell cycle regulators to specific poles of the cell during division. DivK contains a stand-alone REC domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	8.49847e-33
NZ_AP014642.1\|WP_017288823.1\|2701192_2701528_+\|cation:proton-antiporter-subunit-C	gnl\|CDD\|236258	PRK08389, PRK08389, putative monovalent cation/H+ antiporter subunit C; Reviewed.	2.00955e-43
NZ_AP014642.1\|WP_026148721.1\|2685263_2685521_-\|TIGR03643-family-protein	gnl\|CDD\|378528	pfam10985, DUF2805, Protein of unknown function (DUF2805). This is a bacterial family of proteins with unknown function.	1.2837e-39
NZ_AP014642.1\|WP_017288836.1\|2687278_2687725_-\|diacylglycerol-kinase-family-protein	gnl\|CDD\|260134	cd14265, UDPK_IM_like, Integral membrane undecaprenol kinase and similar enzymes. This mostly bacterial family of homo-trimeric integral membrane enzymes, the products of the dgkA gene, catalyzes the ATP-dependent phosphorylation of undecaprenol to undecaprenyl phosphate. C55-isoprenyl (undecaprenyl) pyroposphate acts as a scaffold for the assembly of peptidoglycan components; undecaprenol kinase (UDPK) is involved in recycling undecaprenyl units for re-use in the peptidoglycan biosynthesis. UDPK does not participate in the de-novo biosynthesis of undecaprenyl phosphate. Gram-positive bacteria have a large pool of free undecaprenol, in contrast to gram-negative bacteria. UDPK may also play a role in a stress-induced pathway that affects the function of ribosomes. In Streptococcus mutans, UDPK has been shown to be required for biofilm formation, such as in the case of smooth surface dental caries. Members of the UDPK family have low activity as diacylglycerol kinases (DAGK), and many of them are annotated as DAGKs.	6.84116e-43
NZ_AP014642.1\|WP_017288827.1\|2693807_2696264_-\|hypothetical-protein	gnl\|CDD\|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	2.43878e-05
NZ_AP014642.1\|WP_017288840.1\|2683873_2685184_-\|aminopeptidase-P-N-terminal-domain-containing-protein	gnl\|CDD\|182804	PRK10879, PRK10879, proline aminopeptidase P II; Provisional.	1.17813e-138
NZ_AP014642.1\|WP_026148720.1\|2688407_2688599_-\|DUF3285-domain-containing-protein	gnl\|CDD\|314535	pfam11688, DUF3285, Protein of unknown function (DUF3285). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	8.40807e-24
NZ_AP014642.1\|WP_017288824.1\|2698162_2700739_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_AP014642.1\|WP_017288831.1\|2689667_2691035_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	3.77427e-154
NZ_AP014642.1\|WP_017288835.1\|2687913_2688408_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|234575	PRK00016, PRK00016, metal-binding heat shock protein; Provisional.	4.95648e-50
NZ_AP014642.1\|WP_017288842.1\|2682860_2683415_-\|thylakoid-membrane-photosystem-I-accumulation-factor	gnl\|CDD\|379034	pfam13098, Thioredoxin_2, Thioredoxin-like domain.	3.58968e-06
NZ_AP014642.1\|WP_017288830.1\|2691208_2691427_+\|DUF3148-domain-containing-protein	gnl\|CDD\|371482	pfam11347, DUF3148, Protein of unknown function (DUF3148). This family of proteins has no known function.	2.2351e-37
NZ_AP014642.1\|WP_017288828.1\|2692460_2693765_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.21813e-83
NZ_AP014642.1\|WP_017288829.1\|2691506_2692457_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	9.11721e-103
NZ_AP014642.1\|WP_017288837.1\|2686627_2687224_-\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|235552	PRK05670, PRK05670, anthranilate synthase component II; Provisional.	8.85389e-126

>NZ_AP014642.1|WP_026148720.1|2688407_2688599_-|DUF3285-domain-containing-protein
MTDLPETPTSETPISETPKEPQPSYVKLAMRNMVRKRGTSIFHFALTTIGLLGTLVVLSYLTR
>NZ_AP014642.1|WP_017288835.1|2687913_2688408_-|rRNA-maturation-RNase-YbeY
MQVELSVQDCCPQNSSIQPETWEIWFRQWLDLLKPELDGAPLHPQENYELSLRLTDDREIQSLNQNYRHKDQPTDVLAFASLEVDCPQIDELETEPLYLGDIVISVETAERQAAPHNLETELAWLAAHGLLHLLGWDHPDDASLLRMLDQQQILLNAVGLDAKR
>NZ_AP014642.1|WP_017288836.1|2687278_2687725_-|diacylglycerol-kinase-family-protein
MSQEVPTQSPKRPKVVPLVKPERDLAWQVAPTLFTSFRYAWMGVSYAFLTQRNFRIHVCLGSIAIGLGLLLHASVVELAVIGLTIGLVLAMELLNTAIESVVDLTVKQTYHELAKIAKDCAAAAVLVSAIAAVLVAGCILLPKLWLVL
>NZ_AP014642.1|WP_017288837.1|2686627_2687224_-|aminodeoxychorismate/anthranilate-synthase-component-II
MILVIDNYDSFTYNLVQYLGELGEEFAIASDIQVYRNDQITLDQVRALQPDAIVISPGPGRPEDAGISMELIRQLGANTPILGVCLGHQSIGQVFGGEIVSAPVLMHGKTSEVKHTDTGVFEGLDNPMTATRYHSLVIDRSSCPAVLEITAWVEDQTIMGVRHREYPHIQGVQFHPESVLTSSGKQLLRNFLRSIQGQ
>NZ_AP014642.1|WP_017288838.1|2685857_2686604_-|MBL-fold-metallo-hydrolase
MKRRQFIQYAGAGLVAGAVPIAAQAQSGGLTVQYLGHMCFLFTGGGRRILVNPFRSAGCTAGYRAPKVAADLVMISSQILDEGAIDVVPGNPKLLVESGAYDINGFKAQGIAMDHDRVGGKRFGRNIAWRWSQGGLNVVHLGGAAAPITLEQKILIGSPDVVFLPVGGGAKAYDPQEAKQALQVLNAKIIVPMYYRTAAAKEQCDIGGLDAFLSVMSGTPLRKGGSSISLTKANLPKEGSVIQVMTYA
>NZ_AP014642.1|WP_026148721.1|2685263_2685521_-|TIGR03643-family-protein
MKLPDLDSETIDRILEMAWEDRTPFEAIALQFGLDEPQTIALMRREMKRSSFEMWRKRVTGRKTKHLKQRDFVEGRFRSQNQKGS
>NZ_AP014642.1|WP_017288840.1|2683873_2685184_-|aminopeptidase-P-N-terminal-domain-containing-protein
MLHSEFQQRRDRYLAKIGNGTAIFRSAPMAVMHNDVEYNFRQDSDFYYLTGFNEADAVAVFAPWHEEHKFILFVQPKDRDKETWTGYRIGVEAAKELYGADEAYPITELNEKLGQYVTKAEKLYYHFGRDRTFNDLVLRLWQRCVALYERNGVGPTSIEDPSFTLHPMRQVKSEYELSEMRRAVEIAAEAHNLALKIRKPGMYEYEIQAEMEHLFRLRGGQGIAYPSIVASGKNSCILHYTENDRQMQDGELLLIDAGCSYNYYNSDITRTYPVGNQFTEEQRILYELVLKAQLAAIEQVKPGKPWNEFHDASVRVITEGLLELGLLQGDIEEIIKEEKYKAFFMHGTGHWLGLDVHDAGARKVGETWLNFQPGQVVTVEPGIYIREDFQPLEGQPEISDRWRGIGIRIEDDVLVTETSNEILTAAVPKSLEAMER
>NZ_AP014642.1|WP_017288841.1|2683472_2683778_-|hypothetical-protein
MGSTAQFGLICFVIFFIFSQAFEWASEIKLPLPIFILGGAFLAIASNFDRRAGFPFNLLNTVPPPEEPLIPSAPPTIAQSSTPKFPQEVSFTIRKPEKLDQ
>NZ_AP014642.1|WP_017288842.1|2682860_2683415_-|thylakoid-membrane-photosystem-I-accumulation-factor
MLNRLVSVFIAVFIVCFTIAQPAWASLTDDRYDGEIFALYAGNGSLVPPKVTLADSFNQKKPALLVFYTDDSSDCKQYTNIVSQTQAFYGRVIDILPIRVDSLPIKAKFDPKEPGYYYKGFVPQTVLFDQNGKVRLNEIGSIPYEKIDDEFRKVFDLLPRSESVILKRRPVNEINSELVPQSKS
>NZ_AP014642.1|WP_026148722.1|2682170_2682782_-|hypothetical-protein
MPQIYSTEELIQILSRERHACMNGQRLNLAAMPSGINPLLDRFVNSDGIQRFTAYRDFRTAIHHYQIEHQVSGIVWSSMTINGRTCTCPKIHEHLISLPSDLAILRAEKLKIVQFWQDITTELDLYLSMNSGKLYQLIAQEDIDRILHRSEWAVLSQQGKDETLELILQLGWGKPEEAVYRRGFPESGSEYIHAVQPGYVPIG
>NZ_AP014642.1|WP_017288831.1|2689667_2691035_-|thioredoxin-disulfide-reductase
MANPTVENLVIIGSGPAGYTAAIYAGRANLKPLVFEGFQAGGLPGGQLMTTTEVENFPGFPQGITGPQLMTQMKAQAERWGAELVTEDVLSVDFSTRPFKIRAETREVEAHSVVIATGATAKRLGLPSEHEFWSRGISACAICDGATPIFRGVPLVVIGGGDTAAEEAIYLTKYGDHVNLLVRSDVMRASKAMQDRVLSNPRITVHWNSEAIDVVGDEKHMTGVKIRNRQTGEESIIEAKGLFYAIGHTPNTALFKGQIELDEVGYIKTHGSVETNLEGVYAAGDVQDHEFRQAITAAGTGCMAAMLAERWLSANGLVQEFERIEADVPNEENTAHPASEQVIEFSLEHTRHVGGLALRKLYHESDRLILVKYASPSCGPCHTLKPILNKVVDEFDGKIHYVEIDIEEDPEIAEAAGVMGTPTIHLFKNKDKVAEVKGVKQKSQYRELITTHITD
>NZ_AP014642.1|WP_017288830.1|2691208_2691427_+|DUF3148-domain-containing-protein
MKEFTIGAKVRLISLPPYLKSADPMPMLRPADILQVGDEGTVLDRRPGGYWGVRFEKGAFLLDSQYLEANAE
>NZ_AP014642.1|WP_017288829.1|2691506_2692457_+|MoxR-family-ATPase
MSDLQTTFSKLRQSLDQIVVGQSALIQQLLVALLSGGHVILEGVPGTGKTLTVKVMAKLVRSQFRRVQLTPDILPSDILGTNIFDLNTRSFLLKKGPVFTEILLADEINRTPPKTQSALLEAMEEQQVTLDGESLPLPDFFWVIATQNSLEFEGTYPLPEAQLDRFLFKLMAVYPDPVAEKKMLLNHQAGFQGKRLDLDNIQPVASVEQILQARREIRSLKVEESVLDYLLAVVQKTRQHPDLVLGASPRSAVAWLNVSKAQAWLSGRSYVTPDDIKAVASPLLRHRLILRPEAQLDGIGVEAVINAVLNQVAVPR
>NZ_AP014642.1|WP_017288828.1|2692460_2693765_+|DUF58-domain-containing-protein
MLPSRRTYGLLLLGGAIAVIAFFFNPALAILGMLLFDLIVLALTIWDGWRVKPHRVKIERQVASRLSIGRDNLVSLSVEAGKTTAEVRIYDKYPISFGISSMPLAAKLPPNTSQQLSYTVHPSERGEYIWKDIQVRQLSPWRLAWHNWQIPQEQKVAVYPDLMGLRSLSIRLTLESSGSMRRARRMGIGTEFSELREYGIGDDPRFIDWKATARRGQPLVRVLEPEQEQTLIILLDRGRLMTSQVKGLTRFDWGLNATLALALAGLHRGDRVGVGVFDRQVQTWIPPERGQAHLNHLIERLTPIQPEMLEPDYLGAVTTLVNQQTRRALVVVITDIVDNTASSELLAALGRLTPRYLPFCVTLRDPQVDQQAHTVTEDLPATYERAVALDLIAQRQMAFSTLKQRGVLVLDAPANQITNELVDRYLQLKLKNQL
>NZ_AP014642.1|WP_017288827.1|2693807_2696264_-|hypothetical-protein
MNQLWQYVRECIQLFHWVYFQPFTFVRKLREIHPDLEPTTNPFSLRAEFVEFPNLKRYAEQIGWLTMLTPILAALVVAPIYSFFSDTPFDFLRSGQVLLGWIVGVWIAKGEFPSLQKWLNYLFYGFAIFVVAYGISEQFKLEIFTALLNALPVLKQGVSAIAPFYLFAFGIVFGVAFGVVFGVAFGIMVGVAFGVAFGVAFGVAFGVASGIVVGVASGIVVGVASGIVVGVTFGVASGVTFGVASGVTFGVASGIVVGVAWILGAIRAYFWIPEFVWMLGLGLFARNAHVSASTLRFLPPYFDQLIYFPLPFLSELIVEAHRTNPVAAESTIDYLINSTTQQKAAINAMQGIALDTLSRCKYATDITQASLILDWIPRNEEDFGAVLLQLIDLSQSIRTAYDGTTPYRKLELLDQPIAELTKLQKKLATQEFAKDATLYGSIVEQWLTILQDSRIAFAEAASQSPEIPDRYLAGNALDPLSAKGRFKGRQELFREIENISLSAQPPVLLLYGRRRTGKTSTLNYLPEKVSGDLIPLFVDFQGASSFQTFESIAEWIAEEIQKSARLSRNVILPAIDAKEIARDPFAALLQWMAKIERLVPSKRFLLCLDEFERLEEAIAANNNNRAPLNFLRYVMQNRRQWVLLFSGSHRLSELNPYWSDCLISTQTLPLTYLSPTETRELIQQPVPDFPDIYELEAVDAISNLTHGQPYLVQLTCSQVVDRLNQEILADQPHRKATAKDVQLIIPKVLERGEGYFNEFWQTQTPEQQAILKLIVQGEHITQPTHILDKFIQAEILHKQAEQYIFQVPLIHHYINSLG
>NZ_AP014642.1|WP_017288826.1|2696270_2697365_-|ATP-binding-protein
MSSQTNCPFLADRMLTERKFFVGRRDQIRFILSRMTNDQPTSVNVVGDRRVGKSSLLYHIYQSYEEQVTAYGRRAEEFVVVYLSLRDGNCRKPEDFYQAVADQLLQRQRVLSNPILAQPLQQSQLNGSKFFRAMDAWKQAKVLPVVCLDNFEELLDPESQFDDGFYDNLRALQGRSEIMLIIASRRKLREYKQKGRTSEFFNVSQTEVLQDLSESEAQDLVRLPDTQNPALSEERQQLALKWADRHPYLLQLAALYLWEARQFDKSNEWAQRRFEEDARGVPRRVNPARMVFMGIGRLGQWGQQLGDTADDWGNFLKGMVTLVLLGLALTGVVKWSNFGSFMQDFAGEILKNMQTQPDQKGEGK
>NZ_AP014642.1|WP_017288825.1|2697605_2698004_-|response-regulator
MQTVLIVEDDLTNARVFSKILTKRGGLAVKHTENVDEVIEIAQSGEADIILMDVSLSRSMYQGKAMNGIQLTQLLKADEKTASLPIILVTAHAMEGDRENFLKQSGADGYISKPVVDHQAFVDQIMELLPGA
>NZ_AP014642.1|WP_017288824.1|2698162_2700739_+|DNA-gyrase-subunit-A
MARTRTQSEQLNILPSGQVIPTALHTEMQQSYLEYAMSVIVGRALPDVRDGLKPVHRRILYAMHELGLTPDRPYRKCARVVGDVLGKYHPHGDQAVYDALVRLVQDFSSRYPLLGGHGNFGSVDNDPPAAMRYTETRLSAIGNEALLTEIGESTVDFIGNFDNSQQEPTVLPAQLPILLLNGSSGIAVGMATNIPPHNMGEVVEGLIALIDRPTLSDEELLKLIPGPDFPTGGEIIDTNGIREAYLTGRGSVPIRGIANLEEIQTGRGKHRRSAIVITELPYQVNKAGLIEKIAELVNTGKIEGIGDLRDESDREGIRVVIELRRDANPQKILNFLYRQTPLQNNFGVILLALENGQPKQMSLRQMLQAFLDFRETTLTRQYRHEYDQADSQLHVVEGRLKALANLDDVIDILRNAPDGGTAKIQLQERLDLSDRQADAILSMPLRRLTGMERQSLQTEYDELLAKMDELHKLLSDRKELLKALKKDLRALKKKYGDDRRTKILSSTEVAAMEVKDKDEATTAAKSVNLAFEFEEEEQDTVVEVTQRGYVRRMTPKTYDRLSKTRNDDTVTKDLEDGDDFATQTDFTTTGKTLVVFTRNGKAFTLKVRDIPQANNNKAKGSPLVTLLPPAAQAEPDAIAATFMLPEVLDDQFVLLLTEQGKIKRLPLSEFADITGRGLTALKLKEGDQLLAANPVQVGEQVMLATSSGRVLRFEVNDLQVPVASRTSQGQTGMRVGKKERIVGWAIANEDDTFLMISEQGYAKHMEVSAMRRASTGELGTQSFHFNNKTDLVAGIVAVLPQALVFLLTNENHLARIDVDRLELRAKDERGDRVVKLAKTERITHVSLPVLFGSEEENE
>NZ_AP014642.1|WP_154660834.1|2700777_2700942_+|hypothetical-protein
MLFQLVLARVRQVLLNLCQKAQFVDRDDTNQTRPAREQWSAEPSLSFRFQSDFI
>NZ_AP014642.1|WP_017288823.1|2701192_2701528_+|cation:proton-antiporter-subunit-C
MLEACVFATVLCGFFGIILKKNLVMKIISMDVMSAGVIAYYVVIAARQGTFTPILSGTTERAFADPVPQAVILTGIVIGFSIQALMLVGVMKLAKENPTLESHEIEKQNTP

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Crispr_ID: NZ_AP014642_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014642_5

2695505-2695762

Orphan

Consensus_repeat	Method
CANNAGCGACACCAAACG	CRT

6 spacers

The CRISPR arrays of NZ_AP014642_5

>merge|NZ_AP014642|5|2695505-2695762|CRT
CACTAGCGACACCGAACGTGACACCACTAGCGACACCGAACGTGACACCACTAGCGACACCAAACGTGACACCAACCACGATACCACTAGCGACACCAACCACGATACCACTAGCGACACCAACCACGATACCACTAGCGACACCAAACGCGACACCAAACGCGACACCAAACGCGACACCAAATGCGACACCAACCATGATACCAAAAGCGACACCAAATACGACACCAAAAGCGACACCAAATACGATACCAAACG

>NZ_AP014642|5|2|2695505-2695762|CRT
CACTAGCGACACCGAACG	TGACACCACTAGCGACACCGAACGTGACAC
CACTAGCGACACCAAACG	TGACACCAACCACGATAC
CACTAGCGACACCAACCA	CGATACCACTAGCGACACCAACCACGATAC
CACTAGCGACACCAAACG	CGACACCAAACGCGACAC
CAAACGCGACACCAAATG	CGACACCAACCATGATAC
CAAAAGCGACACCAAATA	CGACACCAAAAGCGACAC
CAAATACGATACCAAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014642.1\|WP_017288826.1\|2696270_2697365_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379062
NZ_AP014642.1\|WP_017288838.1\|2685857_2686604_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|316044
NZ_AP014642.1\|WP_017288825.1\|2697605_2698004_-\|response-regulator	unknown	unknown	gnl\|CDD\|381100
NZ_AP014642.1\|WP_017288823.1\|2701192_2701528_+\|cation:proton-antiporter-subunit-C	unknown	unknown	gnl\|CDD\|236258
NZ_AP014642.1\|WP_017288818.1\|2703847_2704348_+\|DUF4040-domain-containing-protein	unknown	unknown	gnl\|CDD\|236006
NZ_AP014642.1\|WP_017288833.1\|2688701_2689340_+\|SMC-Scp-complex-subunit-ScpB	unknown	unknown	gnl\|CDD\|377219
NZ_AP014642.1\|WP_017288836.1\|2687278_2687725_-\|diacylglycerol-kinase-family-protein	unknown	unknown	gnl\|CDD\|260134
NZ_AP014642.1\|WP_154660834.1\|2700777_2700942_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_026148720.1\|2688407_2688599_-\|DUF3285-domain-containing-protein	unknown	unknown	gnl\|CDD\|314535
NZ_AP014642.1\|WP_017288820.1\|2703325_2703577_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017288824.1\|2698162_2700739_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_AP014642.1\|WP_017288831.1\|2689667_2691035_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_AP014642.1\|WP_017288835.1\|2687913_2688408_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|234575
NZ_AP014642.1\|WP_017288819.1\|2703573_2703855_+\|monovalent-cation/H(+)-antiporter-subunit-G	unknown	unknown	gnl\|CDD\|377023
NZ_AP014642.1\|WP_017288829.1\|2691506_2692457_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_AP014642.1\|WP_017288822.1\|2701524_2702952_+\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|235978
NZ_AP014642.1\|WP_017288830.1\|2691208_2691427_+\|DUF3148-domain-containing-protein	unknown	unknown	gnl\|CDD\|371482
NZ_AP014642.1\|WP_017288828.1\|2692460_2693765_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_AP014642.1\|WP_017288821.1\|2702948_2703329_+\|Na+/H+-antiporter-subunit-E	unknown	unknown	gnl\|CDD\|237159
NZ_AP014642.1\|WP_017288837.1\|2686627_2687224_-\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|235552

Protein	Function_ID	Function_description	E-value
NZ_AP014642.1\|WP_017288826.1\|2696270_2697365_-\|ATP-binding-protein	gnl\|CDD\|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	0.00102922
NZ_AP014642.1\|WP_017288838.1\|2685857_2686604_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|316044	pfam13483, Lactamase_B_3, Beta-lactamase superfamily domain. This family is part of the beta-lactamase superfamily and is related to pfam00753.	3.00261e-66
NZ_AP014642.1\|WP_017288825.1\|2697605_2698004_-\|response-regulator	gnl\|CDD\|381100	cd17548, REC_DivK-like, phosphoacceptor receiver (REC) domain of DivK and similar proteins. Caulobacter crescentus DivK is an essential response regulator that is involved in the complex phosphorelay pathways controlling both cell division and motility. It localizes cell cycle regulators to specific poles of the cell during division. DivK contains a stand-alone REC domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	8.49847e-33
NZ_AP014642.1\|WP_017288833.1\|2688701_2689340_+\|SMC-Scp-complex-subunit-ScpB	gnl\|CDD\|377219	pfam04079, SMC_ScpB, Segregation and condensation complex subunit ScpB. This is a family of prokaryotic proteins that form one of the subunits, ScpB, of the segregation and condensation complex, condensin, that plays a key role in the maintenance of the chromosome. In prokaryotes the complex consists of three proteins, SMC, ScpA (kleisin) and ScpB. ScpB dimerizes and binds to ScpA. As originally predicted, ScpB is structurally a winged-helix at both its N- and C-terminal halves. IN Bacillus subtilis,one Smc dimer is bridged by a single ScpAB to generate asymmetric tripartite rings analogous to eukaryotic SMC complex ring-shaped assemblies.	9.13542e-42
NZ_AP014642.1\|WP_017288836.1\|2687278_2687725_-\|diacylglycerol-kinase-family-protein	gnl\|CDD\|260134	cd14265, UDPK_IM_like, Integral membrane undecaprenol kinase and similar enzymes. This mostly bacterial family of homo-trimeric integral membrane enzymes, the products of the dgkA gene, catalyzes the ATP-dependent phosphorylation of undecaprenol to undecaprenyl phosphate. C55-isoprenyl (undecaprenyl) pyroposphate acts as a scaffold for the assembly of peptidoglycan components; undecaprenol kinase (UDPK) is involved in recycling undecaprenyl units for re-use in the peptidoglycan biosynthesis. UDPK does not participate in the de-novo biosynthesis of undecaprenyl phosphate. Gram-positive bacteria have a large pool of free undecaprenol, in contrast to gram-negative bacteria. UDPK may also play a role in a stress-induced pathway that affects the function of ribosomes. In Streptococcus mutans, UDPK has been shown to be required for biofilm formation, such as in the case of smooth surface dental caries. Members of the UDPK family have low activity as diacylglycerol kinases (DAGK), and many of them are annotated as DAGKs.	6.84116e-43
NZ_AP014642.1\|WP_017288823.1\|2701192_2701528_+\|cation:proton-antiporter-subunit-C	gnl\|CDD\|236258	PRK08389, PRK08389, putative monovalent cation/H+ antiporter subunit C; Reviewed.	2.00955e-43
NZ_AP014642.1\|WP_026148720.1\|2688407_2688599_-\|DUF3285-domain-containing-protein	gnl\|CDD\|314535	pfam11688, DUF3285, Protein of unknown function (DUF3285). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	8.40807e-24
NZ_AP014642.1\|WP_017288818.1\|2703847_2704348_+\|DUF4040-domain-containing-protein	gnl\|CDD\|236006	PRK07377, PRK07377, hypothetical protein; Provisional.	2.7372e-69
NZ_AP014642.1\|WP_017288824.1\|2698162_2700739_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_AP014642.1\|WP_017288831.1\|2689667_2691035_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	3.77427e-154
NZ_AP014642.1\|WP_017288835.1\|2687913_2688408_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|234575	PRK00016, PRK00016, metal-binding heat shock protein; Provisional.	4.95648e-50
NZ_AP014642.1\|WP_017288819.1\|2703573_2703855_+\|monovalent-cation/H(+)-antiporter-subunit-G	gnl\|CDD\|377023	pfam03334, PhaG_MnhG_YufB, Na+/H+ antiporter subunit. This family includes PhaG from Rhizobium meliloti, MnhG from Staphylococcus aureus, YufB from Bacillus subtilis.	1.52032e-09
NZ_AP014642.1\|WP_017288829.1\|2691506_2692457_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	9.11721e-103
NZ_AP014642.1\|WP_017288822.1\|2701524_2702952_+\|cation:proton-antiporter	gnl\|CDD\|235978	PRK07234, PRK07234, putative monovalent cation/H+ antiporter subunit D; Reviewed.	0
NZ_AP014642.1\|WP_017288830.1\|2691208_2691427_+\|DUF3148-domain-containing-protein	gnl\|CDD\|371482	pfam11347, DUF3148, Protein of unknown function (DUF3148). This family of proteins has no known function.	2.2351e-37
NZ_AP014642.1\|WP_017288828.1\|2692460_2693765_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.21813e-83
NZ_AP014642.1\|WP_017288821.1\|2702948_2703329_+\|Na+/H+-antiporter-subunit-E	gnl\|CDD\|237159	PRK12651, PRK12651, Na+/H+ antiporter subunit E.	0.000170356
NZ_AP014642.1\|WP_017288837.1\|2686627_2687224_-\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|235552	PRK05670, PRK05670, anthranilate synthase component II; Provisional.	8.85389e-126

>NZ_AP014642.1|WP_017288828.1|2692460_2693765_+|DUF58-domain-containing-protein
MLPSRRTYGLLLLGGAIAVIAFFFNPALAILGMLLFDLIVLALTIWDGWRVKPHRVKIERQVASRLSIGRDNLVSLSVEAGKTTAEVRIYDKYPISFGISSMPLAAKLPPNTSQQLSYTVHPSERGEYIWKDIQVRQLSPWRLAWHNWQIPQEQKVAVYPDLMGLRSLSIRLTLESSGSMRRARRMGIGTEFSELREYGIGDDPRFIDWKATARRGQPLVRVLEPEQEQTLIILLDRGRLMTSQVKGLTRFDWGLNATLALALAGLHRGDRVGVGVFDRQVQTWIPPERGQAHLNHLIERLTPIQPEMLEPDYLGAVTTLVNQQTRRALVVVITDIVDNTASSELLAALGRLTPRYLPFCVTLRDPQVDQQAHTVTEDLPATYERAVALDLIAQRQMAFSTLKQRGVLVLDAPANQITNELVDRYLQLKLKNQL
>NZ_AP014642.1|WP_017288829.1|2691506_2692457_+|MoxR-family-ATPase
MSDLQTTFSKLRQSLDQIVVGQSALIQQLLVALLSGGHVILEGVPGTGKTLTVKVMAKLVRSQFRRVQLTPDILPSDILGTNIFDLNTRSFLLKKGPVFTEILLADEINRTPPKTQSALLEAMEEQQVTLDGESLPLPDFFWVIATQNSLEFEGTYPLPEAQLDRFLFKLMAVYPDPVAEKKMLLNHQAGFQGKRLDLDNIQPVASVEQILQARREIRSLKVEESVLDYLLAVVQKTRQHPDLVLGASPRSAVAWLNVSKAQAWLSGRSYVTPDDIKAVASPLLRHRLILRPEAQLDGIGVEAVINAVLNQVAVPR
>NZ_AP014642.1|WP_017288830.1|2691208_2691427_+|DUF3148-domain-containing-protein
MKEFTIGAKVRLISLPPYLKSADPMPMLRPADILQVGDEGTVLDRRPGGYWGVRFEKGAFLLDSQYLEANAE
>NZ_AP014642.1|WP_017288831.1|2689667_2691035_-|thioredoxin-disulfide-reductase
MANPTVENLVIIGSGPAGYTAAIYAGRANLKPLVFEGFQAGGLPGGQLMTTTEVENFPGFPQGITGPQLMTQMKAQAERWGAELVTEDVLSVDFSTRPFKIRAETREVEAHSVVIATGATAKRLGLPSEHEFWSRGISACAICDGATPIFRGVPLVVIGGGDTAAEEAIYLTKYGDHVNLLVRSDVMRASKAMQDRVLSNPRITVHWNSEAIDVVGDEKHMTGVKIRNRQTGEESIIEAKGLFYAIGHTPNTALFKGQIELDEVGYIKTHGSVETNLEGVYAAGDVQDHEFRQAITAAGTGCMAAMLAERWLSANGLVQEFERIEADVPNEENTAHPASEQVIEFSLEHTRHVGGLALRKLYHESDRLILVKYASPSCGPCHTLKPILNKVVDEFDGKIHYVEIDIEEDPEIAEAAGVMGTPTIHLFKNKDKVAEVKGVKQKSQYRELITTHITD
>NZ_AP014642.1|WP_017288833.1|2688701_2689340_+|SMC-Scp-complex-subunit-ScpB
MTRLTTTLEAILYLKAQPMTIAQLAELAGFDRQTTEEGLMELMSDYAHRDGALEIAETDSGYSLQLRETYQNLINALIPADLGVGALRTLAVIALKGPISQTELVEIRGSGVYQHIPELVELGFVRKRKNSDGRSSLVQVTDKFHQYFQINQDIGQLIQKKPKPEESVAAETVEKVSEDSIIEESVAPETVKKVSENSVLEEPNEVEVSSVG
>NZ_AP014642.1|WP_026148720.1|2688407_2688599_-|DUF3285-domain-containing-protein
MTDLPETPTSETPISETPKEPQPSYVKLAMRNMVRKRGTSIFHFALTTIGLLGTLVVLSYLTR
>NZ_AP014642.1|WP_017288835.1|2687913_2688408_-|rRNA-maturation-RNase-YbeY
MQVELSVQDCCPQNSSIQPETWEIWFRQWLDLLKPELDGAPLHPQENYELSLRLTDDREIQSLNQNYRHKDQPTDVLAFASLEVDCPQIDELETEPLYLGDIVISVETAERQAAPHNLETELAWLAAHGLLHLLGWDHPDDASLLRMLDQQQILLNAVGLDAKR
>NZ_AP014642.1|WP_017288836.1|2687278_2687725_-|diacylglycerol-kinase-family-protein
MSQEVPTQSPKRPKVVPLVKPERDLAWQVAPTLFTSFRYAWMGVSYAFLTQRNFRIHVCLGSIAIGLGLLLHASVVELAVIGLTIGLVLAMELLNTAIESVVDLTVKQTYHELAKIAKDCAAAAVLVSAIAAVLVAGCILLPKLWLVL
>NZ_AP014642.1|WP_017288837.1|2686627_2687224_-|aminodeoxychorismate/anthranilate-synthase-component-II
MILVIDNYDSFTYNLVQYLGELGEEFAIASDIQVYRNDQITLDQVRALQPDAIVISPGPGRPEDAGISMELIRQLGANTPILGVCLGHQSIGQVFGGEIVSAPVLMHGKTSEVKHTDTGVFEGLDNPMTATRYHSLVIDRSSCPAVLEITAWVEDQTIMGVRHREYPHIQGVQFHPESVLTSSGKQLLRNFLRSIQGQ
>NZ_AP014642.1|WP_017288838.1|2685857_2686604_-|MBL-fold-metallo-hydrolase
MKRRQFIQYAGAGLVAGAVPIAAQAQSGGLTVQYLGHMCFLFTGGGRRILVNPFRSAGCTAGYRAPKVAADLVMISSQILDEGAIDVVPGNPKLLVESGAYDINGFKAQGIAMDHDRVGGKRFGRNIAWRWSQGGLNVVHLGGAAAPITLEQKILIGSPDVVFLPVGGGAKAYDPQEAKQALQVLNAKIIVPMYYRTAAAKEQCDIGGLDAFLSVMSGTPLRKGGSSISLTKANLPKEGSVIQVMTYA
>NZ_AP014642.1|WP_017288826.1|2696270_2697365_-|ATP-binding-protein
MSSQTNCPFLADRMLTERKFFVGRRDQIRFILSRMTNDQPTSVNVVGDRRVGKSSLLYHIYQSYEEQVTAYGRRAEEFVVVYLSLRDGNCRKPEDFYQAVADQLLQRQRVLSNPILAQPLQQSQLNGSKFFRAMDAWKQAKVLPVVCLDNFEELLDPESQFDDGFYDNLRALQGRSEIMLIIASRRKLREYKQKGRTSEFFNVSQTEVLQDLSESEAQDLVRLPDTQNPALSEERQQLALKWADRHPYLLQLAALYLWEARQFDKSNEWAQRRFEEDARGVPRRVNPARMVFMGIGRLGQWGQQLGDTADDWGNFLKGMVTLVLLGLALTGVVKWSNFGSFMQDFAGEILKNMQTQPDQKGEGK
>NZ_AP014642.1|WP_017288825.1|2697605_2698004_-|response-regulator
MQTVLIVEDDLTNARVFSKILTKRGGLAVKHTENVDEVIEIAQSGEADIILMDVSLSRSMYQGKAMNGIQLTQLLKADEKTASLPIILVTAHAMEGDRENFLKQSGADGYISKPVVDHQAFVDQIMELLPGA
>NZ_AP014642.1|WP_017288824.1|2698162_2700739_+|DNA-gyrase-subunit-A
MARTRTQSEQLNILPSGQVIPTALHTEMQQSYLEYAMSVIVGRALPDVRDGLKPVHRRILYAMHELGLTPDRPYRKCARVVGDVLGKYHPHGDQAVYDALVRLVQDFSSRYPLLGGHGNFGSVDNDPPAAMRYTETRLSAIGNEALLTEIGESTVDFIGNFDNSQQEPTVLPAQLPILLLNGSSGIAVGMATNIPPHNMGEVVEGLIALIDRPTLSDEELLKLIPGPDFPTGGEIIDTNGIREAYLTGRGSVPIRGIANLEEIQTGRGKHRRSAIVITELPYQVNKAGLIEKIAELVNTGKIEGIGDLRDESDREGIRVVIELRRDANPQKILNFLYRQTPLQNNFGVILLALENGQPKQMSLRQMLQAFLDFRETTLTRQYRHEYDQADSQLHVVEGRLKALANLDDVIDILRNAPDGGTAKIQLQERLDLSDRQADAILSMPLRRLTGMERQSLQTEYDELLAKMDELHKLLSDRKELLKALKKDLRALKKKYGDDRRTKILSSTEVAAMEVKDKDEATTAAKSVNLAFEFEEEEQDTVVEVTQRGYVRRMTPKTYDRLSKTRNDDTVTKDLEDGDDFATQTDFTTTGKTLVVFTRNGKAFTLKVRDIPQANNNKAKGSPLVTLLPPAAQAEPDAIAATFMLPEVLDDQFVLLLTEQGKIKRLPLSEFADITGRGLTALKLKEGDQLLAANPVQVGEQVMLATSSGRVLRFEVNDLQVPVASRTSQGQTGMRVGKKERIVGWAIANEDDTFLMISEQGYAKHMEVSAMRRASTGELGTQSFHFNNKTDLVAGIVAVLPQALVFLLTNENHLARIDVDRLELRAKDERGDRVVKLAKTERITHVSLPVLFGSEEENE
>NZ_AP014642.1|WP_154660834.1|2700777_2700942_+|hypothetical-protein
MLFQLVLARVRQVLLNLCQKAQFVDRDDTNQTRPAREQWSAEPSLSFRFQSDFI
>NZ_AP014642.1|WP_017288823.1|2701192_2701528_+|cation:proton-antiporter-subunit-C
MLEACVFATVLCGFFGIILKKNLVMKIISMDVMSAGVIAYYVVIAARQGTFTPILSGTTERAFADPVPQAVILTGIVIGFSIQALMLVGVMKLAKENPTLESHEIEKQNTP
>NZ_AP014642.1|WP_017288822.1|2701524_2702952_+|cation:proton-antiporter
MNILTLAWITFPFFLGFVIYLVPKLDKQLSLFGTLVSVAYALKLFTEPALNLKLLDSFGVVLTVDSLTAYFILTNAIVTIAVLFYCWQTSKLTFFYAQTLLLHASINAAFVCSDFLSLYIALEVSGIAAFLLIAYPRTDRSIWVGLRYLFTSNVAMLFYLIGTALVYKADHSFSFTGLQNAPPEAVALLFLGLLVKAGVFISGLWLPMTHSEAETPVSALLSGVVVKASLLALVRCALILDDIDTIVRIFGVATTLLGVFYAVFEKDTKRMLAFHTVSQLGFILAAPEAAGFYTLSHGLVKSSLFLLAGNLPSRNFKELQTKTISTPVWIALVIASLSISGSPLWAGFGAKVFTLKNLLPWQVIAMNVCAVGTATSFAKFIFLPHGKTEEKVRPGLIAAIVLLLGGLLFANIAYIQAYSVENIVKAFVTIGGGWLAYWVIFRRATVKLPRMLEEFEHLVGMMGLTLILLFWMALA
>NZ_AP014642.1|WP_017288821.1|2702948_2703329_+|Na+/H+-antiporter-subunit-E
MIGHVLVRLVLWFLLTADFSAANIVIGLCIAFLLPRSYTAPETLREWLRSLKKILMVIPAAYQEAFEIMLHPHRHETIVKERVPAHRSPRMIFLDIFLITFTPKTIVTKHDDRGWYEVHEVRRDAS
>NZ_AP014642.1|WP_017288820.1|2703325_2703577_+|hypothetical-protein
MNILLIAMLIALLIPLYEAWKNEDIWQTMLAFASVSSKTAIIALTIAVFRDDWMIGVVAVIILSVGNAGMMLLAHILKRMNDG
>NZ_AP014642.1|WP_017288819.1|2703573_2703855_+|monovalent-cation/H(+)-antiporter-subunit-G
MINILSDILIGAGIVLWFWGTLALPTQRSVLYKLHSLSVADTLGSMTIIFGLFLRIPNRWALLLLALFCLMIWNTMLGYVLAHCSSSEEPDYD
>NZ_AP014642.1|WP_017288818.1|2703847_2704348_+|DUF4040-domain-containing-protein
MTEVNIIAVLLPIVAAMLVFQTNPYHALIIRGILGAIAALLYAVLGAGDVGLTEALMGSLLATMLYAVAVRSSFVMRLGILTEENLEPMIENVRSIMNKHYMRVELVPFRDRQDLDQALMTKEIHATCVRDSENYNTVVRIPRLYEILQNELAFPLAQLTYKGEKS

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Crispr_ID: NZ_AP014642_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014642_6

2754155-2754400

Orphan

Consensus_repeat	Method
GGTGGGGTGGTTGGTGGAGTGGTCGGTGGA	CRT

4 spacers

The CRISPR arrays of NZ_AP014642_6

>merge|NZ_AP014642|6|2754155-2754400|CRT
GGTGGGGTAGTCGGTGGAGTGGTCGGTGGAGTGGTTGGTGGAGTGGTCGGTGGAGTGGTCGGTGGGGTGGTTGGTGGAGTGGTCGGTGGAGTGGTCGGTGGAGTGGTCGGTGGGGTGGTTGGTGGAGTGGTCGGTGGAGTGGTTGGTGGAGTGGTCGGTGGAGTGGTCGGTGGGGTGGTTGGTGGAGTGGTCGGTGGGGTGGTTGGTGGAGTAGTCGGTGGGGTGGTTGGTGGAGTAGTCGGTGGA

>NZ_AP014642|6|3|2754155-2754400|CRT
GGTGGGGTAGTCGGTGGAGTGGTCGGTGGA	GTGGTTGGTGGAGTGGTCGGTGGAGTGGTC
GGTGGGGTGGTTGGTGGAGTGGTCGGTGGA	GTGGTCGGTGGAGTGGTC
GGTGGGGTGGTTGGTGGAGTGGTCGGTGGA	GTGGTTGGTGGAGTGGTCGGTGGAGTGGTC
GGTGGGGTGGTTGGTGGAGTGGTCGGTGGG	GTGGTTGGTGGAGTAGTC
GGTGGGGTGGTTGGTGGAGTAGTCGGTGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014642.1\|WP_017288774.1\|2751406_2753812_+\|sucrose-synthase	unknown	unknown	gnl\|CDD\|274149
NZ_AP014642.1\|WP_051077802.1\|2749245_2750025_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_026148714.1\|2747874_2749038_+\|heterocyst-differentiation-protein-HetZ	unknown	unknown	unknown
NZ_AP014642.1\|WP_017288771.1\|2756812_2758951_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|226654
NZ_AP014642.1\|WP_017288769.1\|2760649_2761126_-\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|237999
NZ_AP014642.1\|WP_017288768.1\|2761161_2764188_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225743
NZ_AP014642.1\|WP_017288775.1\|2750216_2751176_-\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|179052
NZ_AP014642.1\|WP_017288763.1\|2767478_2769692_-\|photosystem-I-core-protein-PsaB	unknown	unknown	gnl\|CDD\|176995
NZ_AP014642.1\|WP_017288779.1\|2746614_2746878_-\|DUF1830-domain-containing-protein	unknown	unknown	gnl\|CDD\|370162
NZ_AP014642.1\|WP_017288765.1\|2766063_2766603_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_036046070.1\|2755602_2756739_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|366703
NZ_AP014642.1\|WP_017288781.1\|2744745_2746086_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273349
NZ_AP014642.1\|WP_017288782.1\|2743994_2744696_-\|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223643
NZ_AP014642.1\|WP_144056365.1\|2765152_2766064_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|178283
NZ_AP014642.1\|WP_096735589.1\|2742628_2743726_-\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275017
NZ_AP014642.1\|WP_017288784.1\|2741897_2742590_+\|cyanoexosortase-A-system-associated-protein	unknown	unknown	gnl\|CDD\|275015
NZ_AP014642.1\|WP_017288770.1\|2758968_2760447_-\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|223989
NZ_AP014642.1\|WP_017288764.1\|2766602_2767340_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213192
NZ_AP014642.1\|WP_017288778.1\|2747277_2747760_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_026148712.1\|2764402_2764936_-\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|234582

Protein	Function_ID	Function_description	E-value
NZ_AP014642.1\|WP_017288774.1\|2751406_2753812_+\|sucrose-synthase	gnl\|CDD\|274149	TIGR02470, Sucrose_synthase_1, sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_AP014642.1\|WP_017288771.1\|2756812_2758951_+\|PAS-domain-S-box-protein	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	9.36813e-43
NZ_AP014642.1\|WP_017288769.1\|2760649_2761126_-\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	1.0627e-25
NZ_AP014642.1\|WP_017288768.1\|2761161_2764188_-\|hypothetical-protein	gnl\|CDD\|225743	COG3202, COG3202, ATP/ADP translocase [Energy production and conversion].	5.99456e-06
NZ_AP014642.1\|WP_017288779.1\|2746614_2746878_-\|DUF1830-domain-containing-protein	gnl\|CDD\|370162	pfam08865, DUF1830, Domain of unknown function (DUF1830). This family of short proteins is functionally uncharacterized.	6.11274e-40
NZ_AP014642.1\|WP_017288763.1\|2767478_2769692_-\|photosystem-I-core-protein-PsaB	gnl\|CDD\|176995	CHL00054, psaB, photosystem I P700 chlorophyll a apoprotein A2.	0
NZ_AP014642.1\|WP_017288775.1\|2750216_2751176_-\|septum-site-determining-protein-MinC	gnl\|CDD\|179052	PRK00513, minC, septum formation inhibitor; Reviewed.	8.62239e-88
NZ_AP014642.1\|WP_036046070.1\|2755602_2756739_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	8.39826e-52
NZ_AP014642.1\|WP_017288781.1\|2744745_2746086_-\|hypothetical-protein	gnl\|CDD\|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	3.05382e-100
NZ_AP014642.1\|WP_017288770.1\|2758968_2760447_-\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	3.41726e-110
NZ_AP014642.1\|WP_096735589.1\|2742628_2743726_-\|PEP-CTERM-sorting-domain-containing-protein	gnl\|CDD\|275017	TIGR04155, hypothetical_protein, PEP-CTERM protein sorting domain, cyanobacterial subclass. This domain model describes a subclass with family TIGR02595 of PEP-CTERM protein sorting signals associated with bacterial exosortases. This subclass is restricted to Cyanobacteria, including the genera Cyanothece, Nostoc, Trichodesmium, Lyngbya, Arthospira, etc. This PEP-CTERM subclass features strongly conserved residues within the transmembrane region, including a Gx4GxG motif. Model TIGR03763 describes a corresponding cyanobacterial form of exosortase found in most species with this domain.	5.72604e-07
NZ_AP014642.1\|WP_017288784.1\|2741897_2742590_+\|cyanoexosortase-A-system-associated-protein	gnl\|CDD\|275015	TIGR04153, hypothetical_protein_L8106_04486, cyanosortase A-associated protein. Members of this protein family are found exclusively in the Cyanobacteria, usually usually encoded next to and in at least one case fused to a gene encoding cyanoexosortase A. Note that family TIGR04533 shows a similar relationship to cyanoexosortase B (TIGR04156), and no EpsI is found.	3.53334e-40
NZ_AP014642.1\|WP_017288782.1\|2743994_2744696_-\|TrkA-family-potassium-uptake-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	2.24984e-63
NZ_AP014642.1\|WP_017288764.1\|2766602_2767340_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	3.06369e-54
NZ_AP014642.1\|WP_144056365.1\|2765152_2766064_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|178283	PLN02679, PLN02679, hydrolase, alpha/beta fold family protein.	1.24986e-61
NZ_AP014642.1\|WP_026148712.1\|2764402_2764936_-\|translation-initiation-factor-IF-3	gnl\|CDD\|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	6.3628e-89

>NZ_AP014642.1|WP_017288774.1|2751406_2753812_+|sucrose-synthase
MSELIQAVLKSEERSNFRQFASLLRSADKKYLLRNEILQLFNEKSEQFSDSPNLQKLIRYVQEIILENDFFCLIIRPRIAKQEAYRILEDLTVEPMSVQELLDLRDRFVNHYHPQEGDVYEIDFAPFYDYSPVLRDPKNIGKGVEYLNRFLSSQLFQDEKKGQVSLYQFLQLHRYNGLQLLINERIRSTEELSDRVKQALGIVSDRDPNDPYQTFRFELQDLGFEPGWGNTAARVRETLEILDQLIDSPDHQTLDAFISRIPMIFRVALISPHGWFGQEGVLGRPDTGGQVVYILDQVKSLEKQLQEDLELAGLAILGVQPKVIVLTRLIPNSDGTLCNQRLEKIYGTTDAWILRVPFREFNPHLTQNWISRFEIWPYLETFAIDAERELRAEFQGRPDLIIGNYSDGNLVAFLLARRLKVTHCIIAHALEKSKYLFSNLYWQDLEDKYHFSLQFTADLIAMNAANFIISSTYQEIVGTPESVGQYESYKSFTMPDLYHVVDGIELFSPKFNVVPPGVNEAVFFPFTRTEDRLLNDRERLENLLFYDDDPEQIYGKLDNPDKRPLFSMARLDRIKNLTGLAETYGQSESLQERCNLILIAGKLRTDDSTDHEEISEIEKLYEIIDRYQLKGKIRWLGVRLPKIDTGEVYRVIADREGIFVQPALFEAFGLTILEAMVTGLPMFATRFGGPLEIIQNKVNGFYINPTNYEETAEVILEFLDQCDRDPHYWSQISQRGIERVYSTYTWKIHTTRLLSLAKIYGFWNYTSQDHREDMMRYIESLFYLLYRPRAQGLLAEQLQRS
>NZ_AP014642.1|WP_017288775.1|2750216_2751176_-|septum-site-determining-protein-MinC
MTPDTSVSPTPIDPLSVTSDSTLEKPLEAPTPSSDTPTAENPKTDVTASSDAHASSEITDSSLSTSSELSPQTVAIADLQVRLKTKEGELHLILPPESENSKIALAWVELWQQFKQLLMGQERFWQPNTPVHLVSDDRLLDTRQISAIAEALAEVQLQLKWVHTRRRQTAVVAATAGYSVEQITAASPLLPNSEPATAMEDPLYIQMTLRSGAEIRHNGTVVVVGDLNPGSSIIAEGDILVWGRLRGVAHAGCKGNAKCLIMALQMEPTQIRIADYVARAPETPLAQYFPEVAYVSPQGSIRIARAADFAARKEEPNFS
>NZ_AP014642.1|WP_051077802.1|2749245_2750025_+|hypothetical-protein
MQDRFHALLKRRLLMEAEQKPPVFPWEKEAVHYDAESTIEAQPVLAAASVWLSQIRHMNLPIPLPEAVMTELLARCQSALFSSLREGAKLVQAVDTLFPGQSQLLNNVAGYVMVSPARSSVAKLQDLATELGEELPKSFEGAIDTQQMALSLLAAREILSTLTLKISTQQPRIEREWLTELGAFTLRMEYKTDCLRIEAELPCGGSLQFQGEESRSLVDRDGAGRLNLEIREFAVDRVYPLEVRLGEQDVLTFAVNVQR
>NZ_AP014642.1|WP_026148714.1|2747874_2749038_+|heterocyst-differentiation-protein-HetZ
MGEICQSVDAILQLLLGELKQATHASERNCQEVADRLTQEVVRICSESKRIQASGEIQTWATTLAKHRLQQCLSYYKLGSRRGRAELHSNLSAVIYRYITPPQTQSSYQARLVLIEDFLQGFYMEALNAFRRESQLGAEYTPKTTLELAEYMAFTERYGKRRIPLPGHRNQQLIILRAQTFSQQQPIETLVDLEQAAEGSMSESENPWNMASIQQVREQMVAQEPELAEDTLRQSVVKELIAYLEERKQHDCIDYFTLRLQDLPANEIEAILGLTPRQRDYLQQRFKYHLIRFSFSHHWELVHQWLEADLERNLGLSNRQWKLLHQRATNSQAELLHLKQQKLPESTIAQRLGCTVNQVQKQWFKLLEQAWEIRNDQDSGGTLSADE
>NZ_AP014642.1|WP_017288778.1|2747277_2747760_-|hypothetical-protein
MTLDQQLQALINDAPKDGSTPQLIESIAPVLSAIAQRLRHLQYYVVQTLNQDWVMLTLNHRTQGETEKNVVYAFPSLKDVASSPYDLSDPNLIALPVPVTHILFQMLAMDKDYSTIFFETPGNATIGTEVQRSELESLIHEYWQSQADAVSDANIPSDIA
>NZ_AP014642.1|WP_017288779.1|2746614_2746878_-|DUF1830-domain-containing-protein
MNSLSTSVRSALTFGLCCYVNSTPQVQIARIANIENWYFERVVFPGQRLLFEAPDNAHLEIHTGAIASAVLTDTIACSSLKVKSSEG
>NZ_AP014642.1|WP_017288781.1|2744745_2746086_-|hypothetical-protein
MTVARTICLGFLAVILVGALLLMLPFSTASGEWNSPVAALFTATSAVCVTGLSVVDVGKFYSFWGQFFLVLLVQVGGLGYMTATTVLLLLLGKRLGLREKIAVQQSLDVQGLSGLAGLLQSIIATTLVFELTGVILLMTVFVPQYQDQPLWALWQSIFHSVNAFNNAGFGLFSDNLVQYVTNPVMNFTITGLIIFGGIGYGVIMELYQWIRNRIMRNPCRSNFSLNFRVATSTTISLLILGTIAFYATEFRNPNTLGALSLPHQLMAAWFQSVTPRTAGFNTIDITKMTTAGLFITIALMFMGASPGGTGGGIKTTTVRVLLDCTKAVLQGKEVVLGSQRQIPSALILKAVAVLVGSIGTVIGATILIALTDAKLDFIHILFEVVSAFATVGLTAFGTANLSIPGQLVIIAVMYVGRVGVLLLMSAILGDPKPSFVNYPEENLLVG
>NZ_AP014642.1|WP_017288782.1|2743994_2744696_-|TrkA-family-potassium-uptake-protein
MNLSSLGFFHSLKSDNRNRQFAVIGLGRFGRAVCATMHNSGYEVLAADFDKGRVDQALNDRIVTHARQIDSTQPVALREAGIFEQDTVIIAIGNYVQESIITTMNVKEGGVRHVVAKASSEIHEKLLKKVGADHVVFPEHEMGCDLARSLTKPGILERFELDPENSIVELIAPENFHGKTIAELRLRSHYGLNLLAFSHQGKFIINPDPNTRLSKGIAIVVIGANRDIDRLPI
>NZ_AP014642.1|WP_096735589.1|2742628_2743726_-|PEP-CTERM-sorting-domain-containing-protein
MAKSFFGLTCPKSNFYPVSTFKLAGCSNRGSRRSWTLLTLSITGGWLLSNFWVPVRAATMINNSGLQFEQDTTLDSNFIESHGAYQSTFGVMEVDTKKKTPLIVETKAADDAESIFKPSSFRNHTGTNTDFRGTPSNAVANPTARFTFKGNKRYVLYLESSFNGRPTGILYSENVLNPNQEQQVKFTGGASDLCSSGVMVNWDDTGSKLVRNRGQQDRDFDDFIVQLKGTTCAMGGGEPPEAVSQLPSPPPVGVLPTTVGGRRFPWEPLLLLGALPFLGGGKDSSSNPPGGPGGLVSSSNPGNPGNPGNPGNPGNPGNPGNPGNPICPNKPNCPNTPVPEPMTILGSGTAIAFGALIQRRRRRKP
>NZ_AP014642.1|WP_017288784.1|2741897_2742590_+|cyanoexosortase-A-system-associated-protein
MKTWETIRNYWLAAALASSSLVLLKLTVTPPQKLPQLSYSFPAAIPLSRWEFVKATSIGTQKRYTPSLATSVDDLTIAGQQYRYLRQGRSLDIEMRYFNDTYTKVSDILEESTINNTKIDFETKRSTTGSYAVYQRSNRLYFSACIPVTRDTTVTDGELRGAQTRPDILMQRVFPWFIGRSQLRDLRCLWTNASLPIDPKAPTTTRQDLEQAWTEWIEWWQQNYPSIKNE
>NZ_AP014642.1|WP_036046070.1|2755602_2756739_+|peptidoglycan-DD-metalloendopeptidase-family-protein
MKRVWLIWFCASLLYLSLTLPAFAQEVDQLKQKQQQVDQQRELVQKEREKVQRQERLAQKDLTGIRRNIQVTTSQIKATEANLMNANQVLKNLEKDLAATERTYQQRQSSTVSRLRFLQRQQGSNGWAVLLQSQDLNDFLDRRFRLKQIYKNDRKTLTDLKIEAAKVDRQRQQVEQQKNNIALIAQQLMAQKAQFEQQAEYQKEIVERLRTNRRALEAAEAQLEKDSKSIGELIQKRIAEERARNGIVILGTGQFNLPSAGPITSGFGYRMHPILGYQRFHAGIDFGADYGSPIMAADRGVVIFAGWYGGYGNSVILDHGNGITTMYAHAQELYVSEGQTVERGKAIAATGSTGLSTGPHLHFEVRKDGEPVDPAGYL
>NZ_AP014642.1|WP_017288771.1|2756812_2758951_+|PAS-domain-S-box-protein
MIGEDQFEATSDATGYLWRVLDQVATPIFVQNHHQQIVFANQALCTLAHYSAAEFLRNVDRILSPDLTTGLTAGTQTGYLYDANGGTQEISVVKSAVQGMPLIVATIKETESANSDQLDQAIQERKAAEVALMRSQQRLTLLIQQSPFVFVEWGADYKIQTWNFAAQRTFGYSRKEAVGQSLEKILPEFLKADFLTVIAPLLTQSGTTQQIQKHLTLSGETIICEWFHYPLLAPNGSVMSIVSMGINITDRVNSEAERRQAELARSQSEQRLALLVQHAPLAIIEWTPQLTVKEWNPAAEFMFGTSRDEALGKPCDYWIPSNVQPEVSKVITRLIEQTGGKRNINENIRDNGEIITCEWHNNTVLDADGNIVSIVSTVLDITERIRLETEREQTAIALQNSEQQLRQKAQELEQAFRQLQKTQTQLIQTEKMSSLGQLVAGIAHEINNPVSFIYGNLEPAKQYVEDLLSVIWLYHEAYPVPPQKIAEELEALDLEFMQHDVFKLLDSMGTGAERIRDIVRSLRNFSRHDEAELKAVDLREGLESTLMLLQHLLKANRASGTSMMRPAIQVTQNSDRLPKVQCFAGLLNQVFMNLISNAIEAIDERWLLEEIDFIPEITIEAVLFTEEVDGQPTQWVRIQITDNGIGMSVATHQRLFDPFFTTKPIGQGSGLGLSISYQIVTEQHGGRLWCDHQAERGATFVIEIPVRQLQWS
>NZ_AP014642.1|WP_017288770.1|2758968_2760447_-|DEAD/DEAH-box-helicase-family-protein
MPRKPALSYDRGTLILHPPPKGKAWIEFAVWDDRIEKFRVPANQYRELMLALRSEGIEIDDRAKGFNQIDLVPAVEMEPYPHQQEALDAWQTSGRLGVVVLPTAAGKTYLAQLAMQATQRSTLIMVPTLDLMHQWYANLCAAFPDTEIGLLGGGSRDRTPILVATYDSAAIHAETLGNQYALLVFDECHHLPSDFNRVIAEYAIAPYRLGLTATPERTDGKHEDLKTLIGQEVYRRTPEELSGSALAKHEAIQIRVTLSQQERERYDQLIQIRNAFLKQSNLYLSSAQGWQRFVQASARSKAGRRAMLAHREAKAIAFGTEGKLRVLADLLARHYPERTLIFTDDNATVYRISQDLLIPAITHQTPVKERHEILTKFKQGEYRSLVASRVLNEGVDVPDASIAIVLSGTGSAREYIQRMGRILRKSKDPGKLAILYEVVAEDTNEEGVSRRRNPNQKKKPRSASRQLELVSYTTPPNVVPRAAEGESSYDDW
>NZ_AP014642.1|WP_017288769.1|2760649_2761126_-|cyclic-nucleotide-binding-domain-containing-protein
MLNSFERLLLVRGVPIFKELRDDFLVRLASIMEERSYGVRDTILIEGQEGRSMYVISKGVVRVHSGSRDLTFYKRGDFFGEMSLFDSEPRSASVTAIEPCECLVLTQQQLYEAVDETPGIALNLVKILTGRVREMNKKIKVQEQEIRLLKGEPITQIQ
>NZ_AP014642.1|WP_017288768.1|2761161_2764188_-|hypothetical-protein
MVASNSAPQKSGENRFLRWINLRKGEGQRTFWMFTAYSATSSGLMWLEACSVDRFLSEFGAANLPVIYITSAGLKILLGMLYSWLQTFLPLRSVIIWIALLLAAPLPFFSLGLSESAEAQIGSFYIVQITIFAMQLWLEASHVLNDLNASITANQLFNIREIKRTYPLISSGILVADVFGGFSLPWVLRQFPRDQAVPSVLLLAFGLMVFGAIVLFGLSLANRQAFPTARRRREDNNAEHSPPRLQGQMKSYMQLLQIFFSLAQVFLLLVEFQFLTQLGKDSGLASQIVGGEVAGFLGLFNGALGICELAMQWMFSSRVLDRMGVFTSIMLLPIVVMSLTGISMTGMIPVFYGVLALRFLYELLHYTLLSGSVPFLFYSVPDHIRNQEQAKVRSIAEPISTAVTGLILMGLVKLSMNGIGVAEQTLSFSLMIAAAIVWLWTIGALKKEYLNLLVLNAGRGQLSTSEVDLKALRQKTIDTLEKPGTEEDKRACIEFLSEIDGRNSGEVLAPLLSRLSPELQYKSIEVMLKHPNPAYLNPVKSLCAQRPAPEVMAVALRYIWLTEESASFSELRHYLKPNHPSIVRATAASLILRQGTMSEKAEATYVLHSMLTSKQVQDRVIGCRALGGAVHLQGLRLWLKPYVSKLVKDPSFEVRAATLEAIAATRSEEFYRYLMVGLYHRPTREAAKSALVSLEDTALNNLIRLVDDVERPLLVRTEAMSAIGQIGTPEALDLLISRLTTSWGVPRRALLRILLKVPNEKGIDAVAEQLGRVGIEQLIEQELMFIGQVYAASMDLILERIRCDETMLLRSALETLPADSLERIFLLMKFLYPIGSIRVAEYNLQSESKSAIAQGLEILDSTLDINSKRALLGVLDRELPIDKLQSLSSLVPYTPMQPSERLNHLLELRHFISDWALACCFHLAKRAHWNISPDAIRSGLRHPRGYVREAALSYIATQFPQKLGLVLQGFQNERNPIVAAQVQEMMKKLGMRPPAQHPEALPRLKTES
>NZ_AP014642.1|WP_026148712.1|2764402_2764936_-|translation-initiation-factor-IF-3
MPVIEKRPNRDMPVINERIRFPKVRVIDADGSQLGIMTSREAQTMADEKELDLVLVSDKADPPVVKIIDYGKHKFEQEKKAKEAKKKQHTVDVKEVKMRYKIEEHDYNVRINQAERFLKAGDKVKATIMFRGREIQHSDLAETLLKRMATDLQEIAEVQQAPKKEGRNMMMLLAPKK
>NZ_AP014642.1|WP_144056365.1|2765152_2766064_+|alpha/beta-fold-hydrolase
MVDALPWRQRIGSQRDWMWRGWQTRYTYLRSQKSEIAPPLLFIHGFGASIGHWRHNLSVLSQHHTVYALDLLGFGASEKAIAPYNLRLWLEQVHDFWLTFVREPVVLIGNSIGSSVCLAVAKAYPDMVKGVVMLNLPDSSVLEQPEWFDSAVKVVRPIMVVGKSIFTFPLIFNPFFRVLRSSRLIRLWAKQAYASSDGITDELIEILATPARDTGAVKALRSMVNTPKVTEYRARSILPTVRVPMLLFWGKQDKFVPPSLAEYCVKLNPKLELVEIENAGHCPHDERPEEVNRKILGWIKECV
>NZ_AP014642.1|WP_017288765.1|2766063_2766603_+|hypothetical-protein
MTDVFRISPLIRLTLLSLYIALTTPLPFLAEATDAPVPSRWLWVGIAIGFLILLAALSERVIVDSEGIQVAYPGWVPKFFRRGWQLAWADVKALKPRSTGQGGLVYYFLSQSGEGYLLPMRIVGFARFVDRVQAETGIDTTDVKPLSQPWMYLILLGFTFFLLLIDAWTISTAFTLGKI
>NZ_AP014642.1|WP_017288764.1|2766602_2767340_+|ATP-binding-cassette-domain-containing-protein
MQLQVENVSFSHFRLSKRGNTLEDHALLRNISFGVNQGERIAIVGASGSGKTTLLRLLNRLAEPTQGSIQFEGKSFQEISVTKLRQQILFVAQEPKLFGMTVREALSYPLSLRNLKDVDRCVDECFERIKIARDWYDRTEQELSTGERQWIAIARGLICQPAILLLDEPTANLDANRSELLLRILAQVDCTVLAVTHQFDWAEQFSQRVLQLERGQLVADTNRADWQAIRTAIAQIEIEEAEEWD
>NZ_AP014642.1|WP_017288763.1|2767478_2769692_-|photosystem-I-core-protein-PsaB
MATKFPKFSQDLAQDPTTRRIWYGIATAHDFESHDGMTEEKLYQKLFATHFGHLAIIFLWASGSLFHVAWQGNFEQWIKDPLNIRPIAHAIWDPQFGKPAVDAFTQGGANYPVDISYSGVYHWWYTIGMRTNGDLYQGSIFLLILSAVLLFAGWLHLQPKFRPSLAWFKNAESRLNHHLSGLFGVSSLAWAGHLIHVAIPESRGQHVGWDNFLSTMPHPAGLAPFFTGNWGVYAENPDTAEHIFGTAQGSGSAILTFLGGFHPQTESLWLTDMAHHHLAIAVIFIVAGHMYRTNFGIGHSIKDILNAHKPPAGGLGDGHTGLYDTVNNSLHFQLGLALAALGTVTSLVAQHMYSMPPYAFIAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFWVRDYDPDQNKNNVLARILGHKEAIISHLSWVSLFLGFHTLGLYVHNDVVVAFGTPEKQILIEPVFAQWIQSTHGKALYGFNALLSNPDSIATTAWPNHGNVWLPGWLDAINSGVNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYAFPCDGPGRGGTCDISAWDSFYLAMFWMLNTIGWVTFYWHWKHLAIWSGNVAQFNESSTYLMGWLRDYLWQYSAPLINGYNPYGMNNLAVWAWMFLLGHLVWATGFMFLISWRGYWQELIETLVWAHERTPLANLIRWKDKPVALSIVQARLVGLVHFTAGYVLTYAAFVIASTAGKFG

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Crispr_ID: NZ_AP014642_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014642_7

3476980-3477064

Orphan

Consensus_repeat	Method
GCTAATCTCAGTAATGCTAACTTGA	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_AP014642_7

>merge|NZ_AP014642|7|3476980-3477064|CRISPRCasFinder
GCTAATCTCAGTAATGCTAACTTGACAGAAAGTTGCCTGGTTGAAGTTGCCTTTACGGGCGCTAACCTCAGTAATGCTAACTTGA

>NZ_AP014642|7|5|3476980-3477064|CRISPRCasFinder
GCTAATCTCAGTAATGCTAACTTGA	CAGAAAGTTGCCTGGTTGAAGTTGCCTTTACGGGC
GCTAACCTCAGTAATGCTAACTTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014642.1\|WP_017288065.1\|3484253_3484733_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|376811
NZ_AP014642.1\|WP_026148619.1\|3480040_3481183_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|236462
NZ_AP014642.1\|WP_017288067.1\|3482154_3482430_+\|Npun_R1517-family-heterocyst-differentiation-transcriptional-regulator	unknown	unknown	gnl\|CDD\|375532
NZ_AP014642.1\|WP_017288078.1\|3472670_3473048_+\|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|197713
NZ_AP014642.1\|WP_017288064.1\|3484904_3486893_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226701
NZ_AP014642.1\|WP_017288071.1\|3476382_3476841_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350221
NZ_AP014642.1\|WP_026148621.1\|3474595_3474817_+\|DUF4327-family-protein	unknown	unknown	gnl\|CDD\|372966
NZ_AP014642.1\|WP_017288069.1\|3477467_3479762_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|223551
NZ_AP014642.1\|WP_017288063.1\|3487103_3487526_+\|photosystem-I-reaction-center-subunit-II	unknown	unknown	gnl\|CDD\|367117
NZ_AP014642.1\|WP_017288072.1\|3476116_3476386_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017288079.1\|3471497_3472481_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|177093
NZ_AP014642.1\|WP_051077796.1\|3473264_3474284_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|235066
NZ_AP014642.1\|WP_017288061.1\|3489631_3489997_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017288062.1\|3487663_3489190_+\|anthranilate-synthase-component-I	unknown	unknown	gnl\|CDD\|223225
NZ_AP014642.1\|WP_144056344.1\|3490223_3491453_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NZ_AP014642.1\|WP_017288066.1\|3482688_3484092_+\|TldD/PmbA-family-protein	unknown	unknown	gnl\|CDD\|223389
NZ_AP014642.1\|WP_017288077.1\|3473077_3473182_-\|cytochrome-b6	unknown	unknown	gnl\|CDD\|285308
NZ_AP014642.1\|WP_017288080.1\|3470558_3471461_-\|NAD(+)-kinase	unknown	unknown	gnl\|CDD\|179456
NZ_AP014642.1\|WP_017288073.1\|3475792_3476008_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|212463
NZ_AP014642.1\|WP_017288074.1\|3474874_3475714_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768

Protein	Function_ID	Function_description	E-value
NZ_AP014642.1\|WP_017288065.1\|3484253_3484733_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|376811	pfam02542, YgbB, YgbB family. The ygbB protein is a putative enzyme of deoxy-xylulose pathway (terpenoid biosynthesis).	4.30273e-95
NZ_AP014642.1\|WP_026148619.1\|3480040_3481183_+\|histidine-kinase	gnl\|CDD\|236462	PRK09303, PRK09303, histidine kinase.	0
NZ_AP014642.1\|WP_017288067.1\|3482154_3482430_+\|Npun_R1517-family-heterocyst-differentiation-transcriptional-regulator	gnl\|CDD\|375532	pfam18068, Npun_R1517, Npun R1517. This domain belongs to NPun R1517 which is found in Nostoc punctiforme. Studies indicate that Npun R1517 is encoded by orphan gene 29. Npun R1517 adopts a sleigh-shaped structure with a two-stranded antiparallel beta-sheet forming the floor of the sleigh, a HTH forming the seat and a HTH forming the front of the sleigh.	7.88161e-27
NZ_AP014642.1\|WP_017288074.1\|3474874_3475714_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	1.81464e-153
NZ_AP014642.1\|WP_017288064.1\|3484904_3486893_+\|GAF-domain-containing-protein	gnl\|CDD\|226701	COG4250, COG4250, Predicted sensor protein/domain [Signal transduction mechanisms].	2.78846e-67
NZ_AP014642.1\|WP_017288071.1\|3476382_3476841_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350221	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Pyrobaculum aerophilum proteins, Pae0151 and Pae2754, and homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	4.56324e-32
NZ_AP014642.1\|WP_026148621.1\|3474595_3474817_+\|DUF4327-family-protein	gnl\|CDD\|372966	pfam14217, DUF4327, Domain of unknown function (DUF4327). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.	2.34047e-35
NZ_AP014642.1\|WP_017288069.1\|3477467_3479762_-\|cation:proton-antiporter	gnl\|CDD\|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	2.21783e-89
NZ_AP014642.1\|WP_017288063.1\|3487103_3487526_+\|photosystem-I-reaction-center-subunit-II	gnl\|CDD\|367117	pfam02531, PsaD, PsaD. This family consists of PsaD from plants and cyanobacteria. PsaD is an extrinsic polypeptide of photosystem I (PSI) and is required for native assembly of PSI reaction clusters and is implicated in the electrostatic binding of ferredoxin within the reaction centre. PsaD forms a dimer in solution which is bound by PsaE however PsaD is monomeric in its native complexed PSI environment.	7.43942e-94
NZ_AP014642.1\|WP_017288079.1\|3471497_3472481_-\|SDR-family-oxidoreductase	gnl\|CDD\|177093	CHL00194, ycf39, Ycf39; Provisional.	4.94351e-172
NZ_AP014642.1\|WP_051077796.1\|3473264_3474284_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|235066	PRK02746, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase PdxA.	0
NZ_AP014642.1\|WP_017288062.1\|3487663_3489190_+\|anthranilate-synthase-component-I	gnl\|CDD\|223225	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism].	0
NZ_AP014642.1\|WP_144056344.1\|3490223_3491453_-\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	4.37846e-27
NZ_AP014642.1\|WP_017288066.1\|3482688_3484092_+\|TldD/PmbA-family-protein	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	1.99071e-132
NZ_AP014642.1\|WP_017288077.1\|3473077_3473182_-\|cytochrome-b6	gnl\|CDD\|285308	pfam08041, PetM, PetM family of cytochrome b6f complex subunit 7. This family consists of the PetM family of cytochrome b6f complex subunit IV. The cytochrome b6f complex consists of 7 subunits and contains 2 beta hemes and 1 chlorophyll alpha per cytochrome f. It is highly active in transferring electrons from decylplastoquinol to oxidized plastocyanin.	4.42719e-06
NZ_AP014642.1\|WP_017288080.1\|3470558_3471461_-\|NAD(+)-kinase	gnl\|CDD\|179456	PRK02649, ppnK, NAD(+) kinase.	0
NZ_AP014642.1\|WP_017288073.1\|3475792_3476008_+\|hypothetical-protein	gnl\|CDD\|212463	cd01716, Hfq, bacterial Hfq-like. Hfq, an abundant, ubiquitous RNA-binding protein, functions as a pleiotropic regulator of RNA metabolism in prokaryotes, required for transcription of some transcripts and degradation of others. Hfq binds small RNA molecules called riboregulators that modulate the stability or translation efficiency of RNA transcripts. Hfq binds preferentially to unstructured A/U-rich RNA sequences and is similar to the eukaryotic Sm proteins in both sequence and structure. Hfq forms a homo-hexameric ring similar to the heptameric ring of the Sm proteins.	8.24984e-13
NZ_AP014642.1\|WP_017288078.1\|3472670_3473048_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197713	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor.	1.46212e-19

>NZ_AP014642.1|WP_017288071.1|3476382_3476841_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MTVSLRCVIDTNVCIKQFIADPLTPKVNQLFDHLSNPLTEFFISDLFYIECANVLWKYVRANLYTATQVKADLASLKALRLQVASTQNLMEEAVEIGLNYGISAYDGSYVALSRLVSAPFLTLDNRLVNSLSSSGFDVRLFTNFPIPALPDL
>NZ_AP014642.1|WP_017288072.1|3476116_3476386_+|hypothetical-protein
MATFQIENLPDELYSQIQDLAAENNVTLNEAVIHLLEQACQTNETEKDRAHYAKSMSEILQEIRSRPRVNPSDFGLPDSTVLIQEDRNR
>NZ_AP014642.1|WP_017288073.1|3475792_3476008_+|hypothetical-protein
MSIELDTGLPSTRQIQTIIREEKEVEMKLSTGDLLTGKVRWQDPHCICIMDHYDQPTIVWRQSIVFVKPKM
>NZ_AP014642.1|WP_017288074.1|3474874_3475714_-|diaminopimelate-epimerase
MAIEFTKYHGLGNDFILIDNRASTEPKLTPDQAIAWCDRHFGIGADGVIFALPGQDGTDYTMRIFNSDGSEPEMCGNGIRCMARFLADLETAETGKFQEKYRIQTLAGIITPKFESNGQITVDMGEPRLLASEIPTTLTGEKVIDQPLEVAGKSWNVTCVSMGNPHCITFVDDVAAIELEKIGPLFEHHPVFPQRTNTEFIEVVRSDYLKMRVWERGAGITLACGTGACASLVAGVLNEKCDRRATIELPGGCLDIEWAADGRIYMTGDAEKVFSGSRS
>NZ_AP014642.1|WP_026148621.1|3474595_3474817_+|DUF4327-family-protein
MLQTAQYSLCMIQDEVRQLIDRGVVSRHQPIYTLCKHIPAREWVRFETELERFDFLLRDRIGDLMAQECWDND
>NZ_AP014642.1|WP_051077796.1|3473264_3474284_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPRLVISMGDPAGIGTEVILKALADPAISQQAEITIAGNRNILLETYDRLDSAANPENLNLLHIETPGSITLGTGNAASGEAGFRYLETAIDRTLSGEFDVIVTAPIAKSAWKAAGHIYPGQTELLAEKAGVNRFGMMFVARSPHTDWELRALLATTHIPLSQVPEKLTPEVLTLKLDLLIESLQDSFGITQPRIAIAGLNPHSGEQGQLGREEIDWISDWLEAMRDRFPQAQLDGLSPPDTMWVKPGQAWFGLGQVNAHDGYLALYHDQGLIPVKLMAFDRAVNTSIGLPFIRTSPDHGTAFDIAGKGIADATSMKAAIEFAIRLAKRKALSQSMKGI
>NZ_AP014642.1|WP_017288077.1|3473077_3473182_-|cytochrome-b6
MAGEIFNTAFLASTLILVGLSLGFLLLKLQGGEE
>NZ_AP014642.1|WP_017288078.1|3472670_3473048_+|helix-turn-helix-transcriptional-regulator
MANPNPAETEQCAVQHPVNLNNIRFLHRDLLSVEKSQRMAEFFSLLGDANRLRILSALAVQELCVCDLAAAVKMSESAVSHQLRALRSMRLVGYRKQGRNVFYSLKDHHVLNLYREVAEHLDEEE
>NZ_AP014642.1|WP_017288079.1|3471497_3472481_-|SDR-family-oxidoreductase
MSVLIVGATGTLGRQITRRALDEGYKVRCLVRSPRKAAFLKEWGAELVTGNLCYPETLPAALEGVTAIIDAATARATDSLSIKEVDWTGKVNLIQAAKKAGIERYIFFSILDAEKFPKVPLMEIKTCLEKFLAESGLSYTILRPCGFLQGLIGQYAIPILEGQSVWVMGNTAPTAYMDTIDIAKFAVQALKVPESIGKTLPVVGSKAWSADEIIKVCERLSGKQAKVTKTPIAVVRISRRIAQFFQWTWNIADRLAFTEVVATGRPLTASMDETYEVLGLDPQEMTTLESYLQEYFSRILKKLKEVEYAQEQAKKKKERTKKAYPRF
>NZ_AP014642.1|WP_017288080.1|3470558_3471461_-|NAD(+)-kinase
MPKAGIIYNDDKPIACQVATDLEAKLTSLGWDVALATGAGGILGYASPESPICHTPIDRLVPPGFDSEMKFAIVLGGDGTVLSAFRQVAPCNIPLLAVNTGHLGFLTEILLNQLPAALDALLSEDYEIEERTMLHVQIIREEAMLWEALCLNEMVLHREPLTSMCHFEISVGRHNRVDIGADGIIVSTPTGSTAYALSAGGPVIVPGIPVMILVPICPHSLASRSLVFPNRDPVTIYPAIPHRLVLTADGNAGSYVLPDDHVCVKKAPYPARFVRLRPPEFFSVLREKLGWGVAHVAKPT
>NZ_AP014642.1|WP_017288069.1|3477467_3479762_-|cation:proton-antiporter
MQEDFRLIVDLVSVLAAAAAGGLFAALLKQPVLLGYLAAGVIVGPTGLGLIKEIIQVETLAQFGVAFLLFALGVEFSFSELKKVKVISLGGGGLQIALTILVTTLVSLAMGWVTSPPQGVFLGGILSLSSTAVVLKCLMERNETSTPHGQVMLGILVVQDLALGLMLAVLPALDQPAEEVGLAIGWALLQTGLFALGAVAAGIWVIPRLLRLLAKTESRELFLLGVVALCLGIALLTEHLGLSIEMGAFVAGLMISDAEYADQTLTYVEPLRDIFASLFFASIGMLIDPVFLWNNLELILGLVTLVFIGKFLIVTPLVRIFRYPLKTALIAGLGLAQIGEFSFVLASEGQTLGLVSRRVYLLILGTTAVTLVVTPFVLRLVPKLFAWGESIPWLAKFLEQSDEPLAISEDLPIKDHFIVCGYGRIGRNIVRLLRDRNHPVLVIDQSESQIQKVRDAGIPYIYGNAASSYVLEKAGVAEAKGMAIALPDPMSTRLCVKRSLEISPDLDLVVRANKDKDIELLYQLGAREVVQPEFETSLELSAHLLAGIGIPSPAVQREVQMIRNSHYLEFRPDQASEEISRDLKAVTGEMNSRWYALPEESPLLGMSIEETDIRRLTGVSVMAIRRAGGLTIDYPESLTTLEQGDRLLIVGETDEVAAFDQLARGEAAVPSTNSSCQWLQVPSESPLIGKTLLELELQQRYKITIQTIRRDGKLIRFPEPDAEIQNGDRLLLCGGFHALTQAQEALSPKTEVPLITTSIAEAES
>NZ_AP014642.1|WP_026148619.1|3480040_3481183_+|histidine-kinase
MQAHSNPATDPKVTLQILLFVDQRPASREQIRQIRGFLKDRSAECPFELEVVDVGEQPYLAEHFRLIATPALIKLHPEPRQTLTGSDLIVQLKNWWSRWQKSIEETLPSDSTEPSASVGYSAELIKLTDEVFRLQRENENLQAQLQFKDQIISMLAHDLRNPLTAASIAIETLEIAYKQADGQTSRLTPQMTANLLKHGRTQIRTIDRMITDILQAARGTSSELHIQPEKIDLRALCEDVLAGLGDRMQSKNQQIATDMPSDLPIVYADGERIRQVLVNILDNAIKYTPTGGKIQVSILHRTAQKVQVSICDTGPGVPPENRDRVFEDHYRLQRDEAQDGYGIGLSLCQRIVRAHYGQIWVDSIANQGSCFHFTLPIFRS
>NZ_AP014642.1|WP_017288067.1|3482154_3482430_+|Npun_R1517-family-heterocyst-differentiation-transcriptional-regulator
MNYDPLECKVTAPAEVGVYECEVRLKFRLIEEKGALSNPEQLLEFLLDAYSCGADEYLEPLDVDVKATEISELAASPQMRRRLMRLRNSKD
>NZ_AP014642.1|WP_017288066.1|3482688_3484092_+|TldD/PmbA-family-protein
MNSALSDAKNLISDLMSRYRHQVDYLAIRLEAAEGTDILLRGHKIETLSEGISIGGQVRACYKGGWGFSSFNQLSSLKERVEDALAAAKLVGMDETILAPVAPIQDDRALRLTGSDPRQISLAQKKSLCQHYGEILRSVDPRIATISVRYGDSAQKIILATSDGSMIEQSWVDLEMRFAATARDGETVQTGRETVGSRKAYEDLLGLDRQVEEAAQRAVNSLALPPVKGGAYTVVIDPILSGLFVHEAFGHLSEADMAYENPDILEVMSLGRRFGSPELQIYDGAAIEGHRGSYFYDDEGVPATTTQLIKDGVLVGRLHSRETAGKLEEAPTGNARCLNYHYPPIVRMTNTWIERGKTPVKDLFQNIQEGVYARNWIGGMTNGEMFTFTAGEAWMIRNGEVAEPVRDVTLSGNAFKTLADIEAIGDDFFWDESGGCGKGGQSGLAVGCGGPSLRIRDVVVGGEAIDD
>NZ_AP014642.1|WP_017288065.1|3484253_3484733_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MKLRIGNGYDIHRLVSGRDLILGGIQIAHETGLLGHSDADVLTHAIMDAMLGALSLGDIGHYFPPTDPKWAGADSIVLLEQVHRLIQDQGWQISNIDSVIVAERPKLKPHIEAMRSRLANALNLAPDQVGVKATTNEKMDAVGNEQAIASHAVVLLIQA
>NZ_AP014642.1|WP_017288064.1|3484904_3486893_+|GAF-domain-containing-protein
MILTDSVLEALLNALPQVRPQIYFKSSLTALSHAMEDQVLAGHDRPLVIASFQRERFYRQEAHRYLRIASRTDQVYVLAAPETDFTNRSEHYETIAFEPEDGLSQEWHLVVMSEQYASCLICRERDLTTENQSAPPLHVDQSRRFEGIWTFDRDIVLKAAEILLHRILQYRPELQTKIAPVLDQMATGMVSKLNQVDPAPFADRLVTYLQAGQYKLAKAYRSIAEKERKERLVNSITSAVRRSLNPTEILNVAAEELGKVLGAERCLIYRCKSTDLSATLSHEYLTESMPSLVGHVWTLQGNPLFEEVAQRQEAVFIEDTQTDPRFSMIKDGDRTLQALTLDWNIRSWLMVPVLHQNQVLGMVELHYWGATPHVLERDEVEMVEAIATQIGVALIQAESFANLEDLNQQLEALDRTRSNLIAITGHELRTPLSTIQVCLESLASEPDMSPDLRQVMLNSALVDGERMRKLIQDFLTLSRLESGRVEWRFEPLPLWECVDLALSSLQTRRMTTNLPQIVTQLSTELPLVQVDGEWLVEVLTKLLDNACKFTDATGRVTIRAQRSGDTMLEVMISDTGRGIEENRLETVFDRFYQEEGALRRTTGGTGLGLAICRQIITNWGGKIWAESSGKDLGSEFHFTIPIVATGETKRTAQRKRTSRSRD
>NZ_AP014642.1|WP_017288063.1|3487103_3487526_+|photosystem-I-reaction-center-subunit-II
MSETLTGQAPLFGGSTGGLLTKALVEEKYAITWSSPKEQVFEMPMCGAAKMRQGDNLLYLARKEHCLALGGQLRTKFKITNYKIYRVFPNGEIQYLHPADGVFPEKVNEGRVAVNSVPRNIGSNPEPAKLKFSGRLPYDP
>NZ_AP014642.1|WP_017288062.1|3487663_3489190_+|anthranilate-synthase-component-I
MISPDFSQFAELAKQGNFVPVYQEWVADLDTPVSAWYRVCAGQPYSFLLESVEGGETIGRYSFLGCDPLWILEAKGDRTTQTHRDGTQQVFEGDPFTTLSECLAPYHPVKVPELPPGIGGLFGFWGYELINWIEPRVPIYQATEDDLPDGLWMQIDQVLIFDQVKRKIWAIAYADLRDPNTDLKAAYQQACDRVSQLVDKLKAPFSEEDRLLSWTPKNDTSVNWTSNTTKEQYCASVETAKNYIKAGDIFQVVISQRLSSEFEGDPFALYRSLRLINPSPYMAYFNFGDWQIIGSSPEVLVKAEQASDPTEPRIATVRPIAGTRKRGKTHAEDVALEQDLLADPKEVAEHVMLVDLGRNDLGRVCINGTVKVDELMVIERYSHVMHIVSNVIGQLSPDKSAWDLLKAGFPAGTVSGAPKIRAMEIIHELEPCRRGVYSGAYGYYDFEGQLNSAIAIRTMVVREQGNGKHTVSVQAGAGLVADSVPESEYQETLNKARGLLEAIRCLQS
>NZ_AP014642.1|WP_017288061.1|3489631_3489997_+|hypothetical-protein
MSITQKEVVEYLLDLTLRHKLVEQAMASCDCWFTNNGGEIDGWIPQDLEKQFFSHTLVFQRSDWDLIYVDTRLKLLASNGREIGHYRLISTLDGQIDDDYLVLELSKDDWENDRVVTVCII
>NZ_AP014642.1|WP_144056344.1|3490223_3491453_-|IS110-family-transposase
MGLDWADQKHDVCLYDCAAQTQEHCVIGARPEAIEAWAMQLRVRYGGQPIAVCLEQKRGPLIYALCKYEFLVLYPVNPQTVSKYRQVFTPSRAKDDPTDAALQVELLRKHRDKLTVWQPASPMLRKLQALVEWRRTLIEDIGRTTNRLVDVLKGYFPQAIDCFEHRDTMVFCDFLTQWSTLSAVQQVSDEQLQQFFCEHHSRYKDCNARRIECLRNGIPLTQDSAIVESSQLMVQALVSQLRSLLTSVRQFEAQIDREFNQLPDAAIFAALPHAGTNLAPRLLLAFGEDRTRYQTAQDLLQYAGIAPVTERSGKKCWIHWRWGAPRFLRQTFIEWANESRKASLWAKAFYQAQKQAGKTHQAAIRALAFKWIRILFRCWQDRVPYDEAKYLLALHQKGSPLAQQILSQA

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Crispr_ID: NZ_AP014642_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014642_8

3775177-3775256

Orphan

Consensus_repeat	Method
TCGCGGCTCCAGAATTTTCGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014642_8

>merge|NZ_AP014642|8|3775177-3775256|CRISPRCasFinder
TCGCGGCTCCAGAATTTTCGCGCTCCGCTCAACTCGTTCCTGCGATCGCAACTCCTGTCGCGGCTCCAGAATTTTCGCGC

>NZ_AP014642|8|6|3775177-3775256|CRISPRCasFinder
TCGCGGCTCCAGAATTTTCGCGC	TCCGCTCAACTCGTTCCTGCGATCGCAACTCCTG
TCGCGGCTCCAGAATTTTCGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014642.1\|WP_017287784.1\|3781255_3781795_-\|DUF456-domain-containing-protein	unknown	unknown	gnl\|CDD\|225395
NZ_AP014642.1\|WP_017287796.1\|3767707_3767950_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_026148580.1\|3785102_3785768_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380324
NZ_AP014642.1\|WP_017287792.1\|3771314_3772784_+\|9,9'-di-cis-zeta-carotene-desaturase	unknown	unknown	gnl\|CDD\|131779
NZ_AP014642.1\|WP_017287788.1\|3777348_3777696_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017287782.1\|3782827_3783928_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340839
NZ_AP014642.1\|WP_017287791.1\|3772869_3773892_-\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232
NZ_AP014642.1\|WP_017287778.1\|3788578_3789265_-\|manganese-catalase-family-protein	unknown	unknown	gnl\|CDD\|226076
NZ_AP014642.1\|WP_017287793.1\|3770613_3771210_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380190
NZ_AP014642.1\|WP_017287799.1\|3765248_3766160_+\|branched-chain-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|235841
NZ_AP014642.1\|WP_148664738.1\|3777875_3780167_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380492
NZ_AP014642.1\|WP_051077792.1\|3767377_3767659_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017287783.1\|3781828_3782671_-\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320690
NZ_AP014642.1\|WP_017287798.1\|3766292_3767183_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|215315
NZ_AP014642.1\|WP_017287790.1\|3774027_3774816_-\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|163356
NZ_AP014642.1\|WP_017287795.1\|3768053_3769523_-\|glycolate-oxidase-subunit-GlcD	unknown	unknown	gnl\|CDD\|273050
NZ_AP014642.1\|WP_017287786.1\|3780175_3780835_+\|deoxyribonuclease-V	unknown	unknown	gnl\|CDD\|236937
NZ_AP014642.1\|WP_017287781.1\|3783924_3784842_-\|NAD(+)-kinase	unknown	unknown	gnl\|CDD\|179455
NZ_AP014642.1\|WP_017287794.1\|3769653_3770565_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275040
NZ_AP014642.1\|WP_086371027.1\|3786061_3788500_+\|phosphoenolpyruvate-synthase	unknown	unknown	gnl\|CDD\|235809

Protein	Function_ID	Function_description	E-value
NZ_AP014642.1\|WP_017287784.1\|3781255_3781795_-\|DUF456-domain-containing-protein	gnl\|CDD\|225395	COG2839, COG2839, Uncharacterized protein conserved in bacteria [Function unknown].	1.59132e-17
NZ_AP014642.1\|WP_026148580.1\|3785102_3785768_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|380324	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	2.92314e-65
NZ_AP014642.1\|WP_017287792.1\|3771314_3772784_+\|9,9'-di-cis-zeta-carotene-desaturase	gnl\|CDD\|131779	TIGR02732, Zeta-carotene_desaturase, 9,9'-di-cis-zeta-carotene desaturase. Carotene 7,8-desaturase, also called zeta-carotene desaturase, catalyzes multiple steps in the pathway from geranylgeranyl-PP to all-trans-lycopene in plants and cyanobacteria. A similar enzyme and pathway is found in the green sulfur bacterium Chlorobium tepidum.	0
NZ_AP014642.1\|WP_148664738.1\|3777875_3780167_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380492	cd06268, PBP1_ABC_transporter_LIVBP-like, periplasmic binding domain of ATP-binding cassette transporter-like systems that belong to the type 1 periplasmic binding fold protein superfamily. Periplasmic binding domain of ATP-binding cassette transporter-like systems that belong to the type 1 periplasmic binding fold protein superfamily. They are mostly present in archaea and eubacteria, and are primarily involved in scavenging solutes from the environment. ABC-type transporters couple ATP hydrolysis with the uptake and efflux of a wide range of substrates across bacterial membranes, including amino acids, peptides, lipids and sterols, and various drugs. These systems are comprised of transmembrane domains, nucleotide binding domains, and in most bacterial uptake systems, periplasmic binding proteins (PBPs) which transfer the ligand to the extracellular gate of the transmembrane domains. These PBPs bind their substrates selectively and with high affinity. Members of this group include ABC-type Leucine-Isoleucine-Valine-Binding Proteins (LIVBP), which are homologous to the aliphatic amidase transcriptional repressor, AmiC, of Pseudomonas aeruginosa. The uncharacterized periplasmic components of various ABC-type transport systems are included in this group.	5.28875e-69
NZ_AP014642.1\|WP_017287782.1\|3782827_3783928_+\|glycosyltransferase	gnl\|CDD\|340839	cd03811, GT4_GT28_WabH-like, family 4 and family 28 glycosyltransferases similar to Klebsiella WabH. This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.	4.68648e-71
NZ_AP014642.1\|WP_017287791.1\|3772869_3773892_-\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	1.36171e-06
NZ_AP014642.1\|WP_017287778.1\|3788578_3789265_-\|manganese-catalase-family-protein	gnl\|CDD\|226076	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism].	5.3618e-93
NZ_AP014642.1\|WP_017287793.1\|3770613_3771210_-\|hypothetical-protein	gnl\|CDD\|380190	NF033186, internalin_K, class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.	0.00113674
NZ_AP014642.1\|WP_017287799.1\|3765248_3766160_+\|branched-chain-amino-acid-transaminase	gnl\|CDD\|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	3.66328e-164
NZ_AP014642.1\|WP_017287783.1\|3781828_3782671_-\|M48-family-metalloprotease	gnl\|CDD\|320690	cd07331, M48C_Oma1_like, Peptidase M48C, integral membrane endopeptidase. This subfamily contains peptidase M48C Oma1 (also called mitochondrial metalloendopeptidase OMA1) protease homologs that are mostly uncharacterized. Oma1 is part of the quality control system in the inner membrane of mitochondria, with its catalytic site facing the matrix space. It cleaves and thereby promotes the turnover of mistranslated or misfolded membrane proteins. Oma1 can cleave the misfolded multi-pass membrane protein Oxa1, thus exerting a function similar to the ATP-dependent m-AAA protease for quality control of inner membrane proteins; it cleaves a misfolded polytopic membrane protein at multiple sites. It has been proposed that in the absence of m-AAA protease, proteolysis of Oxa1 is mediated by Oma1 in an ATP-independent manner. Oma1 is part of highly conserved mitochondrial metallopeptidases, with homologs present in higher eukaryotes, eubacteria and archaebacteria, all containing the zinc binding motif (HEXXH). It forms a high molecular mass complex in the inner membrane, possibly a homo-hexamer.	1.23899e-53
NZ_AP014642.1\|WP_017287798.1\|3766292_3767183_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|215315	PLN02578, PLN02578, hydrolase.	3.37057e-78
NZ_AP014642.1\|WP_017287790.1\|3774027_3774816_-\|isochorismatase-family-protein	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	2.61552e-43
NZ_AP014642.1\|WP_017287795.1\|3768053_3769523_-\|glycolate-oxidase-subunit-GlcD	gnl\|CDD\|273050	TIGR00387, Glycolate_oxidase_subunit_glcD., glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity. [Energy metabolism, Other].	0
NZ_AP014642.1\|WP_017287786.1\|3780175_3780835_+\|deoxyribonuclease-V	gnl\|CDD\|236937	PRK11617, PRK11617, deoxyribonuclease V.	8.85145e-121
NZ_AP014642.1\|WP_017287781.1\|3783924_3784842_-\|NAD(+)-kinase	gnl\|CDD\|179455	PRK02645, ppnK, NAD(+) kinase.	0
NZ_AP014642.1\|WP_017287794.1\|3769653_3770565_+\|hypothetical-protein	gnl\|CDD\|275040	TIGR04187, conserved_hypothetical_protein, ATP-grasp ribosomal peptide maturase, SAV_5884 family. Members of this protein family are ATP-grasp ligase family enzymes that regularly occur in a contexts with a methyltransferase and a putative ribosomally translated post-translationally modified peptide precursor. Because of this conserved gene neighborhood and close sequence similarity to ATP-grasp enzymes from microviridin/marinostatin biosynthesis cassettes, this enzyme is suggested also to serve as a peptide maturase.	5.57347e-33
NZ_AP014642.1\|WP_086371027.1\|3786061_3788500_+\|phosphoenolpyruvate-synthase	gnl\|CDD\|235809	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated.	0

>NZ_AP014642.1|WP_017287790.1|3774027_3774816_-|isochorismatase-family-protein
MNEPMYPLGLPPNAWYVNSTIADLTRSPIPPQIITVETATKKIRLDLNKSALIVIDMQNDFCHPDGWLAHIGVDVTPARSPIVPIQQFLPIARQVGLSIVWVNWGNRPDLLNISPATRYVYNSDGQSVGLGDPLPKNQAPVLQKDSWAAAIVDELQPIEGDIQIDKYRMSGFWDTPLDSILRNLGKTTLFFAGVNADQCVMATLQDANFLGYDCILLEDCTATTSPDFCWQATLYNVKQCFGFVSSSISVLNGIKSGVKDKN
>NZ_AP014642.1|WP_017287791.1|3772869_3773892_-|VCBS-repeat-containing-protein
MTFFDSLNSFKAPDFNGDGRTDLFSFDLTTRIPEINLSANIRTSASSPIFFIPEGWQTPKYGDFNQDGKTDLVWRNPKTGENAIWLMDGTSSLDAQWLDSLQGTWTEVIGDFDGNGTSDLFWYNSTTGEFQIWAMNGAQRVKRSIAQIEPGWEPAAVNFISDHRHELFWRNPLTGQNAVWTIDPQTLSTSGEWIETKSPTWNYEMIDYNGDGRSDLFWRDRLTGQNQIWLWTSDSLQPDPIAIDLPSTSRDFVIKTGDFDGNHKTDFLVRNPSTGENQIWRAGDIEVQISDIPAQSATFFPEIGDYNGDRFSDIRWVSVTGQENVIWFSDGKLPQSIATE
>NZ_AP014642.1|WP_017287792.1|3771314_3772784_+|9,9'-di-cis-zeta-carotene-desaturase
MRVAIVGAGLAGLAAAVELVDAGHEVEIFEARSFVGGKVGSWIDADGNHIEMGLHVFFNNYANLFALMKKVGVYQELLPKEHVHTFVNRGGELGKLDFRFLVGAPFHGLKAFFTTGQLTIQDKLQNAIALGTSPIVPGLINFDAAMKMIRALDGVSFADWFRSHGGSQNSLKKMWDPIALALGFIDTENISARCMLTIFMMFAAKTEASQLNMLSGSPAEYLHKPIVDYLEARGAKIHTRRQTRRILFEGEGTNTTVTGLAIANGETEEIITADAYLAACDVPGIQRLLPQEWRSIKEFDNIYKLEAVPVATVQMRFDGWVTEMNDPAARKQVDHAAGIDNLLYSSDADFSCFADLALTSPKDYYREGQGSLMQVVLTPGDPFVPMSNEDIAQHALKQIHDLFPSSRELNMTWFNVVKLAQSLYREEPGKDPYRPSQKTPIENFFLAGSYTQQDYIDSMEGATISGKQAAQKILEPTGYKVQGVGLFKY
>NZ_AP014642.1|WP_017287793.1|3770613_3771210_-|hypothetical-protein
MVKVLLLVAMLGFLTSCTPLPTKIRAYVESRPVDPTPYEKQGLVAVQPDAPKPSGSEIKLPPTVTVKPGQKLSEEEIKTLLTQADDKAASAANLSRVAQSKDDWRLVIDRWKLAIDILKPAAQIPRIRKQLSEYQTNLTAAQVQASTNPRQIEATERSTSDGIPLTIQAPSPSPSPSASPSPTASPSSTASPSPSPSP
>NZ_AP014642.1|WP_017287794.1|3769653_3770565_+|hypothetical-protein
MTVLILGHAADLHASHLYQTLERLGIVCHYWDVATFPTQAQITWSPVSQEGLLRLADGRHLAVSQIRSVFWRHFAGVRVPRLPHASVQKAAYQDAIALVRSLIQIPSIHWVNPIQAYQLHREKPLQLSKLHQLGVNLPDTIVTNDPTSVREFVYRHSKTTFKPIYGGARTQLISAEHLNPERLKLSLKIAPVTLCEYIAGANIRSYVIGDTVYAAEICSAALDFHEDDDVKVIPIIFPKAMCQQAIAIAQALDAEWLMIDWRLTPSGKYLFLEANPNPSFLAFEQQTGFPITQALIELLLNSD
>NZ_AP014642.1|WP_017287795.1|3768053_3769523_-|glycolate-oxidase-subunit-GlcD
MTAVVTQPNWQAIAREFEAVVGKSGVVQRREELLVYECDGLTSYRERPAIAVLPRTTEEVAEVVKICARASVPFVARGSGTGLSGGALPIENCVLIVTSLMRKILQVDLENQRVIVQPGVINSWVTQTVSGAGFYYAPDPSSQIICSIGGNVAENSGGVHCLKYGVTTNHVLGVKIVTPEGAIVDLGSEIPESPGYDLTGVFVGSEGTLGIATEITLKILKTPESIRVLLADFMSVEAAGATVSDIISAGIIPGGMEMMDNMSINAVEDVVATGCYPRDATAILLVEVDGLEVEADLNSQRVAEICKKNGARNVTVATEADERLTIWKGRKAAFAAMGKMSPDYYVQDGVIPRTKLEYVLREIEALGQKFGYNVANVFHAGDGNLHPLILYNNAIPGALEQVEALGGEILKLCVKVGGSISGEHGIGADKRCYMPEMFSPADLETMQWVRLAFDPQGIANPTKLFPTPRTCGEAAQAHGQKVFEGIERF
>NZ_AP014642.1|WP_017287796.1|3767707_3767950_-|hypothetical-protein
MRAIEVTGSVNEEGCIQIDQPLPAAKSTRFRGILLFPDSESSLNQEWSSSAVQPSVQDWLDDPAEDIYTLEDGEPVSDEA
>NZ_AP014642.1|WP_051077792.1|3767377_3767659_-|hypothetical-protein
MRPAYCLTDPIGENRHLIFALITSRIPAMLLDSDLVLDLSHPDFVMSGLRKPSTLRLNHLITLRRSMVQRRLGELSLQTHAVLVEKLCSLLNG
>NZ_AP014642.1|WP_017287798.1|3766292_3767183_-|alpha/beta-fold-hydrolase
MQVASSIDTVPGQYWNWRNEPVYYVKMGERNNRPPLLLIHGFGASTDHWRKNVIGLSQEFEVWAIDLLGFGRSAKPDWKYSGELWRDQIHEFVTEVIGAPAVVAGNSLGGYVGLCAASQRPESSAGLILINSAGPFTDIQGTTKPDPIRQVMGSFVMSLFHQDWASWLLFQYVRQKSTIRKTLEKVYLDQTAVTDRLIEEIQRPAFDQGADKVFASVFRTPQGEKVDVLLGQLTRPLLMLWGEADPWINARDRGAKFRSYHPQLTEHYLNAGHCPHDEIPDQVNALIRTWVTSAVN
>NZ_AP014642.1|WP_017287799.1|3765248_3766160_+|branched-chain-amino-acid-transaminase
MHNFLPIAYFKNQFLPFENANLSIATHALHYGTGAFGGLRGIPNPENPNQILLFRLDRHCQRLSNSARLLNFELPADKIQSIITDFVKKNQPKTSFYIRPFVYTSDLGIAPRLHNIEHDFFVYGLELGDYLSPDGVSCRISSWYRQEDRSLPLRGKISGAYITSSLAKTEAVSCGFDEAILLNSQGKVSEASGMNIFLVRNGELITPGYDQDILEGITRDSVLTIARDLGIKTIERPVDKSELFIADEVFLSGTAAKVTPVKRIETFEFSKHRPVTDKLREAVTAVTENRNETYRDWVNVIEI
>NZ_AP014642.1|WP_017287788.1|3777348_3777696_+|hypothetical-protein
MSKKKFALGLIAGFGIAMIAAPSHAQQAPSSADLLRDPQSQDSLSNLFNNRGDNATSSLMDLIQRVSQGSVDPEAFRQQQRESLDAATAEFLNKRRQMLQTQPQVAPAPVVQPLN
>NZ_AP014642.1|WP_148664738.1|3777875_3780167_-|ABC-transporter-substrate-binding-protein
MPELVDRPTMPLSLFRAAMLGRILDARYKILQPLGSGGFGQTYIAEDTKRPGNPRCVLKHLSFSSQDEAILRQVRRMFFAEAETLERLGRHDQIPRLLAYFEEDQEFYLVQEFIQGHPLSEEIGGDRRLAEAQVVDLVEDVTQVLGYVHEQGVIHRDLKPENLIRRDRDQKLVLIDFGAVKTILESSIATEPVDLSVPIYTSGYAASEQCLGQPRYNSDFYSLGMIAIQALTGVRPSQLAYDPNTHNLLWRDRVTVSHDFAAVLEKMTQFHFNDRYQTAAEILEALNQVKSSIFTQMPISEAKNRLRSPQPVLNKPLKMSAIAAGLTAIIGASAWTLTRNTPTPTDPPGQRGQFLSVGQTLLSPNTPPQPLKQAAIDKMKSGEFAEAVSLFEQAHKIDQSDPETLIYLNNARIGSEQANTIAVVLPIRTNPTASAEVLRGIAQAQDRINQTKAMKLKIAIASDDANPDLARQIATQLVRDPTVLGVIGHGTSDTTLAAGKIYQEGELVAISPVSSAKNLSGFSRYVFRTMPSDELPAKRLVSYMTKQLKKRKAAVFFNSKNLYSKSLTEAFKDALYYADKGKVVHEVDLSNPAIEVAENVAQAMKKGAEVIFLAPNAELLDRTLLIINANQKRLPILAGDALYNSRILTELGSAASEMVVAIPSAQTQLQNSPFEQQAKSVWGRAPGWRSALGYDATQAMIAALQKAPTRNGIRATLSTPSFTTIGAVQSVSFTPEGDRETEITLVRVTGAKSGKFIFQPIPK
>NZ_AP014642.1|WP_017287786.1|3780175_3780835_+|deoxyribonuclease-V
MKIEQRHEWVLTAEAAIVIQQELSQEVITDDQFGTVNYVAGIDVGFEAEGTITRAAVAILKYPELEFCDHAIARRPTTFPYIPGFLSFREVPAVLDALEQVKTSPDLLLCDGQGLAHPRRFGIACHLGILTNLPAIGVGKSRLVGKHEEPPDQRGAWVPLIYKGNTIGAVLRTRPGTKPLYISSGHRIRLESAIAYVMGCTTKYRLPETTRHAHKLASG
>NZ_AP014642.1|WP_017287784.1|3781255_3781795_-|DUF456-domain-containing-protein
MELTVLYWILVAVMVVGVVGAVVPGIPGPSLILVAILLWCIVTKFAIPLLPLGLIFVALLLSSVVEWLGSYWGAKQIGASRWSQMGMFIGMAIGFFGLLPALPLGGPIAGILVGGLLGGFIGEFLYRSDLPTSERLRTAGRVTLGIGFGALIGNLIELVLAIAAVAVFVWVTLPSVMWT
>NZ_AP014642.1|WP_017287783.1|3781828_3782671_-|M48-family-metalloprotease
MSVLIRLILGLIFAIGGLFSYYGNTSQNPVTGENQRVQLTPRQEIVLGLQSRQQMAARHGGLFPDQGLQTYMDEVGQRIVQRSDASKSPYTYEFHLLRDPKTVNAFALPGGQVFITAALLGQMKSEAQLAAVFGHEIGHVVGRHGAEHLAKQQLGSALVTAVGVAASGGQDGGQGAAAIAQATNQLVNLRYGRNDESESDRLGLKFMLDAGYDPRGILEVMQILAKSAGSGRQPEFLSSHPDPGNRLQALKAAIQKQFPQGLPRDLEDGRDRFAQAVLRR
>NZ_AP014642.1|WP_017287782.1|3782827_3783928_+|glycosyltransferase
MSDRIAILLAGNKMTGDTRVIFNLAEGLIARGFEIDLLLASSAQFVLSDLSKQVNVIDLQTPVTARTSSMIKLLFPLLHYLRRVQPKTLISNLCFANAIVTLSKFLTFPAPKLVLVEHLALSTDEHDGEPHSKLLPLLIRVLYPHADAVISVSQQIGAELRSKYNLTNVLAIANAVVNSRLTEQAQSDLDHPWFASDEIPVFLGAGRFAAQKDFTTLIRAFSILRQEMPARLVILGDGALRSQLEAQIQSLGLQADVELPGFVYNPYQYMSRATAFVLSSRWEALPTVLIEAMACGCQVIATQCRSGVDEILSGGEFGQIVPIADPVAMAAAMKNSIQHPISPRLLKFRADDFSIEQAVDRYLEVI
>NZ_AP014642.1|WP_017287781.1|3783924_3784842_-|NAD(+)-kinase
MQLKQVLIIHKSGDALSQRWAKKCAEALEKRGCNVLMGPSGPKDNPYPVFLASVSLPINLAVVLGGDGTALSAARNLASDGIPILAVNVGGHLGFLTESPDDFDSETIWDRLEADRYAVQTRMMLQATVHEGNRTNLEPVSDRFLALNEMCIKPASADRMITSILEMEIDGEVVDQYQGDGLIISTPTGSTCYTVAANGPIIHPGMAAISVTPICPLSLSSRPILIPSGSVVSIWPLADYDLSTKLWMDGVLATSIWPGQRVDIRMAAEEARFIVLRENYSYYQTLREKLQWAGARIHYHNNHRN
>NZ_AP014642.1|WP_026148580.1|3785102_3785768_-|NAD(P)H-dependent-oxidoreductase
MSTTSEIASPQFALEHLQWRYATKQFDPAKKIPTETWNVLEQSLVLSPSSFGLQPWKFLVIRNLELRQQLLEHSWGQKQVVDASHLVVFAIQKNIDAAYVDRYIVRMAEVQQVPVESLQGFAKVVKGFLDQRPSPSDVQAWATRQVYIALGQFMTTAAMLEIDTCPMEGFVPAKYDEVLGLSEQGYASVVLCPTGYRSAEDKYAAKPKVRFATQEVVQNLD
>NZ_AP014642.1|WP_086371027.1|3786061_3788500_+|phosphoenolpyruvate-synthase
MLEAQVSNSLINESTKAQALVLPFQQVGIADIPIVGGKNASLGEMIQQLTSKGVNVPNGFATTAFAYRSFIAGAGLETQLRQLFADLNVEDVQNLQERGRKARSLILQTPFPVELEQAIANAYQTLCEEYGTDTDVAVRSSATAEDLPDASFAGQQETYLNIHGLPSLLEACHKCFASIFTDRAISYRQLRGFDHLEIALSVGVQKMVRSDLAASGVMFSIDTETGFRDAALITAAYGLGENVVQGAVNPDEYVVFKPTLKQGYRPILDKRLGSKEIKMVYDLGGTKSTKNRSVSLEQRQQFAIADEEILQLANWACIIEDHYSQVRGVPTPMDIEWAKDGITGELFIVQARPETVQSQKTQQILRTYRLVATPPEPMITGRAVGEMIGQGKARVILDVHQLDQFQTGDVLVTNRTDPDWEPIMKKASAIVTNQGGRTCHAAIIAREMGIPAIVGCGNATTQIYTGQTITVSCAEGETGRVYAGMIPFEINEVELETLPQTKTDILMNVGNPQEAFSLAAIPNDGVGLARLEFIIANQIQTHPLALIYFDELDDRVAQAQIAALTPGYDDKSQFFVDKLAYGIGTIAAAFYPKPVIVRMSDFKSNEYANLLGGRQFEPREENPMIGWRGASRYYDERYQEGFALECQAMKRVRDQMGLTNVILMIPFCRTPEEGKRVLAEMAKYGLTRGENGLQVYVMCELPSNVMLATQFCEVFDGFSIGSNDLTQLTLGLDRDSSLVAHLFDERNEAVKQMVGLAIAKVKRCGRKIGICGQAPSDYPEFAKFLVQQGIDSISLNPDSVLKTRMAIAQAEQ
>NZ_AP014642.1|WP_017287778.1|3788578_3789265_-|manganese-catalase-family-protein
MFFHKKESIHTVNVDDANPKFAQLLLEQFGGATGELTAALQYWVQSFHCENPGIRDMLQDIAIEEFGHLEMVGKLIESHTKNVDQTEAYKSSLFAVRGMGPHFLDSQGSAWTAAYINEGGDVVRDLRANIAAEAGARQTYEALIKLAPDKGTEKTLVHLLTREISHTQMFMKALDSMGKLTDPMFGNIQPDETVDIYYNLSQNGQDQRGPWNSEPTFKYIADPMSQQS

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Crispr_ID: NZ_AP014642_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014642_9

3821513-3821630

Orphan

Consensus_repeat	Method
GAACCGATTGTCGTCGGTGAACCAGAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014642_9

>merge|NZ_AP014642|9|3821513-3821630|CRISPRCasFinder
GAACCGATTGTCGTCAGTGAGCCAGAAGTGGTCAGCGAACCGATTGTCGTCGGTGAACCAGAAGTAGTTGGTGAGCCAATCGTTGTAAGTGAACCGATTGTCGTCGGTGAACCAGAAG

>NZ_AP014642|9|7|3821513-3821630|CRISPRCasFinder
GAACCGATTGTCGTCAGTGAGCCAGAAG	TGGTCAGCGAACCGATTGTCGTCGGTGAACCAGAAGTAGTTGGTGAGCCAATCGTTGTAAGT
GAACCGATTGTCGTCGGTGAACCAGAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014642.1\|WP_017287742.1\|3829514_3830360_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_026148575.1\|3828683_3829166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_154660828.1\|3812433_3812595_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017287739.1\|3831990_3833253_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224004
NZ_AP014642.1\|WP_017287755.1\|3815827_3817468_-\|lasso-peptide-biosynthesis-B2-protein	unknown	unknown	gnl\|CDD\|379721
NZ_AP014642.1\|WP_017287756.1\|3815441_3815759_-\|PqqD-family-protein	unknown	unknown	gnl\|CDD\|377508
NZ_AP014642.1\|WP_017287758.1\|3812799_3813573_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|188054
NZ_AP014642.1\|WP_017287743.1\|3829122_3829518_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017287747.1\|3824482_3826171_-\|serine-protease	unknown	unknown	gnl\|CDD\|274350
NZ_AP014642.1\|WP_017287754.1\|3817789_3818494_+\|glutathione-S-transferase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|172475
NZ_AP014642.1\|WP_017287741.1\|3830586_3831024_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380410
NZ_AP014642.1\|WP_036045731.1\|3818655_3819321_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_AP014642.1\|WP_017287760.1\|3811405_3812287_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238899
NZ_AP014642.1\|WP_017287757.1\|3813572_3815438_-\|asparagine-synthase	unknown	unknown	gnl\|CDD\|238364
NZ_AP014642.1\|WP_017287746.1\|3826542_3827625_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017287740.1\|3831090_3831738_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_AP014642.1\|WP_017287751.1\|3819969_3820887_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277324
NZ_AP014642.1\|WP_017287745.1\|3827793_3828687_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275319
NZ_AP014642.1\|WP_017287752.1\|3819334_3819973_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_AP014642.1\|WP_017287738.1\|3833277_3834516_-\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|177681

Protein	Function_ID	Function_description	E-value
NZ_AP014642.1\|WP_017287739.1\|3831990_3833253_-\|HD-domain-containing-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	1.41587e-94
NZ_AP014642.1\|WP_017287755.1\|3815827_3817468_-\|lasso-peptide-biosynthesis-B2-protein	gnl\|CDD\|379721	pfam14907, NTP_transf_5, Uncharacterized nucleotidyltransferase. This family is likely to be an uncharacterized group of nucleotidyltransferases.	3.58056e-50
NZ_AP014642.1\|WP_017287756.1\|3815441_3815759_-\|PqqD-family-protein	gnl\|CDD\|377508	pfam05402, PqqD, Coenzyme PQQ synthesis protein D (PqqD). This family contains several bacterial coenzyme PQQ synthesis protein D (PqqD) sequences. This protein is required for coenzyme pyrrolo-quinoline-quinone (PQQ) biosynthesis.	1.07027e-15
NZ_AP014642.1\|WP_017287758.1\|3812799_3813573_-\|hypothetical-protein	gnl\|CDD\|188054	TIGR00477, Tellurite_methyltransferase, tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB [Cellular processes, Toxin production and resistance].	0.000149622
NZ_AP014642.1\|WP_017287747.1\|3824482_3826171_-\|serine-protease	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.80087e-23
NZ_AP014642.1\|WP_017287754.1\|3817789_3818494_+\|glutathione-S-transferase-N-terminal-domain-containing-protein	gnl\|CDD\|172475	PRK13972, PRK13972, GSH-dependent disulfide bond oxidoreductase; Provisional.	6.2465e-94
NZ_AP014642.1\|WP_017287741.1\|3830586_3831024_+\|hypothetical-protein	gnl\|CDD\|380410	cd07007, cupin_CapF-like_C, Staphylococcus aureus CapF and related proteins, C-terminal cupin domain. This family contains cupin domains of proteins homologous to Staphylococcus aureus CapF (also known as WbjC in Pseudomonas aeruginosa and FnlB in Escherichia coli). CapF is a bifunctional metalloenzyme produced by certain pathogenic bacteria and is essential in the biosynthetic path of capsular polysaccharide (CP), a mucous layer on the surface of bacterium that facilitates immune evasion and infection. Thus, CapF is an antibacterial/therapeutic target. In S. aureus, enzymes CapE, CapF and CapG catalyze the sequential transformation of UDP-D-GlcNAc in the CP precursor UDP-L-FucNAc via the intermediate compound UDP-N-acetyl-L-talosamine (UDP-L-TalNAc). CapF consists of two domains; the C-terminal cupin domain catalyzes the epimerization of the compound produced by the upstream enzyme CapE, and the N-terminal short-chain dehydrogenase/reductase (SDR) domain catalyzes the reduction of the compound afforded by the cupin domain, requiring one equivalent of NADPH. The cupin domain is crucial for catalyzing the first chemical reaction, and also important for the stability of the enzyme. Similarly, in P. aeruginosa, WbjC, WbjB and WbjD enzymes synthesize UDP-N-acetyl-L-fucosamine, a precursor of the lipopolysacharide component L-fucosamine. The cupin domains contain a conserved "jelly roll-like" beta-barrel fold.	4.94492e-06
NZ_AP014642.1\|WP_036045731.1\|3818655_3819321_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	2.17794e-116
NZ_AP014642.1\|WP_017287760.1\|3811405_3812287_-\|hypothetical-protein	gnl\|CDD\|238899	cd01918, HprK_C, HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria. It catalyzes both the ATP-dependent phosphorylation of Ser-46 of HPr and its dephosphorylation by phosphorolysis. The latter reaction uses inorganic phosphate as substrate and produces pyrophosphate. Phosphoenolpyruvate carboxykinase (PEPCK) and the C-terminal catalytic domain of HprK/P are structurally similar with conserved active site residues suggesting these two phosphotransferases have related functions. The HprK/P N-terminal domain is structurally similar to the N-terminal domains of the MurE and MurF amino acid ligases.	2.27608e-07
NZ_AP014642.1\|WP_017287757.1\|3813572_3815438_-\|asparagine-synthase	gnl\|CDD\|238364	cd00712, AsnB, Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine synthetase B catalyses the ATP-dependent conversion of aspartate to asparagine. This enzyme is a homodimer, with each monomer composed of a glutaminase domain and a synthetase domain. The N-terminal glutaminase domain hydrolyzes glutamine to glutamic acid and ammonia.	3.77618e-30
NZ_AP014642.1\|WP_017287740.1\|3831090_3831738_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.64714e-43
NZ_AP014642.1\|WP_017287751.1\|3819969_3820887_-\|metallophosphoesterase	gnl\|CDD\|277324	cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.83805e-39
NZ_AP014642.1\|WP_017287745.1\|3827793_3828687_-\|hypothetical-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	0.00494283
NZ_AP014642.1\|WP_017287752.1\|3819334_3819973_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.95544e-16
NZ_AP014642.1\|WP_017287738.1\|3833277_3834516_-\|PDZ-domain-containing-protein	gnl\|CDD\|177681	PLN00049, PLN00049, carboxyl-terminal processing protease; Provisional.	1.31495e-147

>NZ_AP014642.1|WP_017287751.1|3819969_3820887_-|metallophosphoesterase
MRLSRRQLLVLGGVGAAGLAVAGKSFSRQFEPMPQTVSEPPKPASQELMLRFVAVADSGAGDQNQFDSANAMANYHKKHPYSLVTLAGDNIYNSGEMERIGIAFEQPYAPLLKQNVRFQACLGNHDIRTANGDPQVQYKNFHMTGRYYTYREKDVQFFVLDTNGNADWKDQMAWLNAELGRSNAPWKIVYGHHPIYSSGHYGTDREMIRKFAPLFKKHQVQLYINGHEHHYERSTSIDGTTYLVTGIGGASLRPVGTSKTTEYSVSRFGFSAIEVYPDRLQIEGIGTDGLVFDRGIIARQAQVAV
>NZ_AP014642.1|WP_017287752.1|3819334_3819973_-|class-I-SAM-dependent-methyltransferase
MTDASTRTVQLATDFIGKGDPLGWFEELYATANGDPTTVPWARLTPHPLFVEWLNQHSLVGKTAIVIGCGLGDDAEELAKRGMEVTAFDISETAIAWCKKRFPDSSVNYQVADLFQLALGKFDFVLESYTIQAMPPELRAQAIPKIAELVAESGQLLVICLGREPEQPLATVPFPLTKIELSGFTQAGLHEVKFEDLNEPETVRRWRVQYQG
>NZ_AP014642.1|WP_036045731.1|3818655_3819321_-|ABC-transporter-ATP-binding-protein
MIWMEDITKTYRLGEVDVPVLKGIDLAIEEGEYVAIMGMSGSGKSTLMNIIGCLDRPSDGNYVLEGRNLTTLDNDELAFIRNQRIGFVFQQFNLLSRATALENVMLPMVYAGVARSQRKRRAEEALTRVGLAERLSNRPNQLSGGQQQRVAIARALVNRPALVLADEPTGALDTQTSAEVMALLTELNQQGITIVIVTHEPDIAAQTQRTIHVKDGLVVDG
>NZ_AP014642.1|WP_017287754.1|3817789_3818494_+|glutathione-S-transferase-N-terminal-domain-containing-protein
MLDLYYWTTPNGHKITIFLEEVGLPYNLVPINIGKGDQFQPEFLKVSPNNRIPAIVDHEPADGGEPISLFESGAILLYLAEKTGKLIPSDLRGRADTLQWLFWQMGGLGPMAGQNHHFSQYAPEKISYAINRYVNETGRLYAVMNKQLSDREFLAGEYSIADIACYPWIVPYERQGQKLEDFPNLKRWFETIQSRPATVRAYEKAEAFKADQISPEQARELLFNQSAGTVKPAS
>NZ_AP014642.1|WP_017287755.1|3815827_3817468_-|lasso-peptide-biosynthesis-B2-protein
MSPLSQDTFAPLSSQDDLELALLLCCARTHRDATTVAQIHQLVHQPIRWENLIPLAEWHSVLPLVYQTLNTVCPEKIPPEISKRLRQSFYAISLNNQLLIQTLLILLKQFEDAEIPVLAFKGPLLAISYYGDLNLRQFNDLDLLVARNDFERAQTLLREKNYQPYQVLGWQTAFAHSSSGVGIDLHRALTPPYFKFDLQFEELRSRLQSCSFDNQQIACLSPIDMLLILCVSFCRDRHEQKSRLIQLCDIAQLIQAYPNLDWHQVLNQSRRFGILHMVLVTLALGQQLLQIPLPKMMQTQIQHNSAIESLLHPLATNLLKTNLQPQLLQFDSETFCLDHTFYLALRERWSDKIPYFLNYAALPVDHLQRIQLPKAFDHLYLIRRTIGPKTNLFRLKVLLHRVKLFLRLSPQDSIRFICALALFPCIAIALQHWNIAQIQGVLTRLCRPLSPASPVQVARTVRLVEIAARQYSSRWANCLKRSLVLWYLLRCQGIASELRIGVRREQGEFQAHAWVECQGKILNDIPDVHQSFAAFDSTLMHKLSSD
>NZ_AP014642.1|WP_017287756.1|3815441_3815759_-|PqqD-family-protein
MLKHPQITLTDSLLNQQKYQIADDVLYRQVDTEAILLSISGGAYYSLNETSIYIWDALKNQQPLASAVDRILDEYDVERTQVLTDLQQVLQDLSAYGLISPVNLE
>NZ_AP014642.1|WP_017287757.1|3813572_3815438_-|asparagine-synthase
MSGILGIWNSQQPSPWEAMLSDLTVLGRDGQGSWHDPSIGLSLGRSQLFNTPESCLEAPVVEQDGCVLVWDGRLDDRETLLAGRTQVPDAQLIIESYRRWGVDSLRHLVGEFVFILWDASQDLLFVGCDPVGNRTIAYVWDGNTLLLCSRVLTLLLHPQVSHEFDEGYMAHTICDAWAHPAEITPFQAIKRLRPGYGLILQSGRLQQRQLAKLAPTSYDLRDSPETYFEKFWYLLNQSVRDRLRNYRPVCTTLSGGLDSTTVTVALLNHLSNLEAFSVTTERYAAIDESEPIQAFLDRYSQVKWHSINCDDAWVLSEPWEQLPLPDDPFTSCVVPMHLRMMQEAQKLGFGLIFDGEWGDEFCYIFWRDRIQVGDWQFLWQQLRSPGNRRSFVLQDLILPNCPKPWQTQWMMSRLKLRNLAPQWIQSTYLAQIQQTQVAEQLAMKSFGLDRVKALNQEIEDASFVGTMQVHRLLRSAHQLEYTSPLRDQRVVEFANRLHPSLQLDSNYQKVFLRHANRTTLPDAVRLRPKINYFDPLKYAGLGRGSQALELLEQAKQNSYLQEAIDFKQLENSLLSYRQSYEQDYRPDEPFHDGIANQLISTLGLANWLTQLDKKYLARKVI
>NZ_AP014642.1|WP_017287758.1|3812799_3813573_-|hypothetical-protein
MMIKIHKQSYRYFYQLIDLLTACFVGFWLGVLDRNSMYQIDQQFYDSEAIYRDEEYNQSGFWEWEFKAIQTHFKTCKTILLAGAGGGREILALHALGYEVDAFECNPNFVKFANEFLQEKQINCTVQIAVRDTCPVYEEIYDGLIVGWGAYTLIQGRQTRIDFLKQMRDRVKSGSPILLSFLYAYKPAKYYKMISTIANLIRAIRWQSKTEIGDFILPENFVHYFSKEQISSELKEAGFRLEFYSELNYGHAVGIAE
>NZ_AP014642.1|WP_154660828.1|3812433_3812595_-|hypothetical-protein
MKKTYLSMQVSQLGSLAELTQQAQGNPKSGPFQDGINMRVTNPGGFDGSENMR
>NZ_AP014642.1|WP_017287760.1|3811405_3812287_-|hypothetical-protein
MKFQSILQAATDELRHISNTQLTLELVTELPLNSGAGSIYKNSSAQNTSHHYWIPWTEEMGAWIDANGHHAILVVVESAPIENIQGSPVLCFAAHIAATCLGLQGQIALHANVVALDGVAIAFAGCSGKGKSTLTTYCVSRGASFVTDDVLVVNDQGQVRPGSPRIKLFPHTGESFGLDASETTTYKIHYAIEQLGITPQNQSFPLGTIYLLEESDRIYIEQLSPSQALLDLLIHSYHVTEIMPDQPSLFYAYTNLVAQVPVKKLFYPRSFESLPKLYDFLQTETHSFTPQLL
>NZ_AP014642.1|WP_017287747.1|3824482_3826171_-|serine-protease
MARIGWIVGLFSGITLAFSQASITLAKAVLSPSEIRQTAQPLTVQILGFSPEGSQTGSGVIIAKQGNTYAVLTNRHVICNLDFAGQCDRNLRLQIRTANGQRYPVANTHTFEQLKGIPDVAVVLFQSPQNYPVATFGDSTQLAKRDLIWINGYPGSPQQSPGTEPVAFHKGFFTSQVNDPHSEGYSLMFTTIAAPGMSGSPIFDASGRVIAIFGQSGDMGVLAGIPSNFVSDLLQKSSKLNQMTLTVDRSALTGTRPQLSTPQTAEDYFLRGVSQIDQPQSALADLTKAIELNPKLMMPYRTRATIRARMGDQQGAMRDFETVLKLNPDRSDALSARAQMRIQWNDLTGAIADYTEALQHAPQTPSLLFNRGMTHSRLGNYQASVDDFTAGIVLQPKDAVAYRERGRSYLGLQQLPSALKDLDRSIALDPSSAVAYDLRCFIQMGMDRYQAALNDCNRAIEINPTYAIAYADRAFAWLGLNNPQNAIQDAKTASRLDPKLSESYTVQAMAYERIGDLQNAIVAYEAVMNLLRENGQINSRAYQGISATIAQLRSKVKSQESR
>NZ_AP014642.1|WP_017287746.1|3826542_3827625_+|hypothetical-protein
MAQPILYLAITNHGFGHATRAAAIAAEIQRLDPEIVLILATTAPRSVLEAYIPGDFIHRPRALDVGIIQQDSLIMDKPATLEKLREIRSRQQATIASEANFILQNKAGLVLGDIPPLAAPIAKAAGVPGWMMSNFGWDFIYRDWGGEFLEMADWISDCFSQCDRLFRMPFHESMQAFPTVTDVGLTGVAPRFEAAEVLAKFNLTDTPKEKIILVTFGGLGLDRVPYENLTHLSDYQFLCFDNNAPDLPNLIKVDDRFYRPIDLMPICGRLLSKPGYSTFSEACRYEIPVMTVTREGFAESPILLEGIQDYAEHQIWSLDEFFNGDWSNIRQPMNPPRKSEKLPKDGNLTIAQAVVDYLRS
>NZ_AP014642.1|WP_017287745.1|3827793_3828687_-|hypothetical-protein
MKKIVSLMISVIVLTLSGVRSTQAQVLEFTPNLPKSEVKKSPKIQESTPSEIQESPSSKTQASSPAILTPLKPSSPPQPQPKPQNIDTSTDDTRLVAVAPDELFAGGSDSLVARAVGSAEGTRTPEGGKTWAYYGHVDPGNGAWNMGSFSYQHGASSPDDADRRQLDRLWRQYQVIQESAIAAGLRLGLEEQLNGIDLANQAPLAALDEGGYVDRLRQAYERGFRGSEAVLQARTYSYLNPRTNRWEAPGLGNTLEGISRDQARRQGAIAEAMSYHQQSQVARSRTSDDERVSAVPK
>NZ_AP014642.1|WP_026148575.1|3828683_3829166_-|hypothetical-protein
MKVINIWGISSGFVKLGTIFLLLLLISGCTSSQQPNHSISEPKLYQSWQLKLGDQIAGSTVIGGLGDISIALNGKSVYAPSTGNVYLGQRGCVYFAGTDTPAYLFRLCGLKSPKLGALKAGDAIATGDILQFATLLKQSDGTWALVEPDKSLLERTLKPR
>NZ_AP014642.1|WP_017287743.1|3829122_3829518_-|hypothetical-protein
MIDKLNSNQFLASIAGVLAIGIFIQAMGLPSFGSKEATLECQGTVRSDSALAKDKIANLIQFKTGDTKDSVRKVLKEPYCVLPKIAIRSGMQTEREAYRVASDALEKSTSQTFIVVSYEGDQYLGYKFWIR
>NZ_AP014642.1|WP_017287742.1|3829514_3830360_-|hypothetical-protein
MTELKTESQSTRIVQTQPTARRQSKKSAIAAGKESPSEAPAESNTEDIAKKTSRTTKTKKTTQTRQAASKSTNQSASTRVKLTWEPSPSIEASLQQFNEQLNATWMAIDELKATVEQMQIQTARPASVQLPLEPPKAQMSDVAPHQPAQSVPVPRTRARVPETAPQSAIPPFRPTSGFPTSVRVRRRKPFDLLMQSVLRLPVQNSGIAIDAALWVMAAAGLRVGLKYVVMAFPVLELPVMILVFVPALLAAYAALFIPNVNRIGVYRLLLLALGLFVGGRL
>NZ_AP014642.1|WP_017287741.1|3830586_3831024_+|hypothetical-protein
MGITTQIEIIQLQSIKGGMAEFYTPQSSHETMLVNVPANTIDDLFVHRTQTDQLLVVRGSFILVVLQNRKYEYIPLSESYPQVVKIPPGVPHGAINLSDSPCVLVNAVLRHRPAIEQDYRPMRRPIPYDIDIAHQLQEFLRPSAA
>NZ_AP014642.1|WP_017287740.1|3831090_3831738_+|response-regulator-transcription-factor
MPLTILVAEDDVGTRLSISDYLECSGYSVVSAENGADAIALLDTHQPHLIVTDVSMPLIDGYELVRHVRRRPALRLLPIVFLTGRTETTERVKGYQLGCDVYLAKPFELSELGAVVRNLLDRTQMIETEWRSRQGFEASGEIGEKPIADIDIALTDREKQVLALLSDGLSNIQIGNHLHLSARTVEKHVSSLLRKTETSNRAELVRFAMEHHLVV
>NZ_AP014642.1|WP_017287739.1|3831990_3833253_-|HD-domain-containing-protein
MVERVYHDPLHGAIALDQSDPTEALLIQLIDTPAFQRLRRIRQLGPASLTFHGAEGSRFTHSLGVLAVARRAFDRIARDYPQLLPHRTIVLCAALLHDIGHAAFSHTAEEIFGSDHELWTRRILRESEPIRQLLDRFSPDLIDQLEAVFLKKYPLPLVWQLVSSQLDCDRLDYLMRDSYFTGASYGHIDLDRILMAMRYDPVTQQLVVAKKGMAAIEHYLIVRYFMYSQVYNHRKNIAATWVLLKTFQQARYQLKLGNLEADQNVRAWLNQDGNQIELDQYLAGDDGAFLYHFQQWRSHSDPVLADLSRRFLDRDLLKSLDISQLEESDRDLLLEKARYWTTQAGFDSSTYCGLRIAVSRGYTLYDRGIHIQTTTGLREIGELSALVQTLTQPIQKVWLIYLREIDDKIKSFVDKAGELL
>NZ_AP014642.1|WP_017287738.1|3833277_3834516_-|PDZ-domain-containing-protein
MEKRFIWVRSLTIVGLSIAAALLFLAAPALALTEEQKLINEVWRIIDRGYVDPTFNHKNWWALREKYLKQSLPNREATYGVISQMLAVLDDPFTRLLKPDQYRSLQTSTSGELTGVGLQIALDMETKRLKVISPISGSPAAKAGILAGDSILEIDGVTTEGLSLDEAAEKMRGTIGSHVMLTVKRETEEREFDLVRARVELNPVVAELRSQPNGLKVGYLRLSQFNANAAMELGHAIASLEKNGADHYILDLRNNPGGLLNAGIEIARLWLDEGAIVYTVNRQGTLGSFEATGKALTHDPLVVLVNQGTASASEILAGALQDNARATIIGEKTFGKGLIQSLFDLSDGSGLAVTVAKYETPNHTDINRLGIQPDRVVPIDQTFTLEQIGTEADRQYQAAIAAFSDSLVAGAK

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Crispr_ID: NZ_AP014642_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014642_10

4328257-4328330

Orphan

Consensus_repeat	Method
GTTGAGGAACCGAAACCCGTTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014642_10

>merge|NZ_AP014642|10|4328257-4328330|CRISPRCasFinder
GTTGAGGAACCGAAACCCGTTGAGACTGCTCCAGAAGTGAAAGAAACGCCAGTTGAGGAACCGAAACCTGTTGA

>NZ_AP014642|10|8|4328257-4328330|CRISPRCasFinder
GTTGAGGAACCGAAACCCGTTGA	GACTGCTCCAGAAGTGAAAGAAACGCCA
GTTGAGGAACCGAAACCTGTTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014642.1\|WP_017287216.1\|4337969_4339610_+\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|381113
NZ_AP014642.1\|WP_017287231.1\|4318683_4321800_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_AP014642.1\|WP_017287220.1\|4333487_4334627_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340833
NZ_AP014642.1\|WP_017287228.1\|4323042_4324053_-\|phosphoribulokinase	unknown	unknown	gnl\|CDD\|180975
NZ_AP014642.1\|WP_017287235.1\|4314667_4315690_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225915
NZ_AP014642.1\|WP_017287232.1\|4317910_4318366_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_026148516.1\|4334815_4336279_+\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100081
NZ_AP014642.1\|WP_017287225.1\|4328733_4330203_+\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|215497
NZ_AP014642.1\|WP_017287224.1\|4330207_4331158_-\|GDP-L-fucose-synthase	unknown	unknown	gnl\|CDD\|187550
NZ_AP014642.1\|WP_017287217.1\|4337070_4337850_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017287237.1\|4311128_4312535_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017287223.1\|4331174_4332251_-\|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224014
NZ_AP014642.1\|WP_017287221.1\|4332665_4333388_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|376775
NZ_AP014642.1\|WP_017287215.1\|4339613_4340051_+\|anti-sigma-regulatory-factor	unknown	unknown	gnl\|CDD\|225083
NZ_AP014642.1\|WP_017287233.1\|4316621_4317875_+\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|225844
NZ_AP014642.1\|WP_026148517.1\|4324536_4325778_+\|ferredoxin--NADP(+)-reductase	unknown	unknown	gnl\|CDD\|99804
NZ_AP014642.1\|WP_017287234.1\|4315771_4316614_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227078
NZ_AP014642.1\|WP_017287218.1\|4336300_4337014_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350277
NZ_AP014642.1\|WP_017287230.1\|4321918_4322656_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237864
NZ_AP014642.1\|WP_017287236.1\|4312689_4314333_+\|iron-uptake-porin	unknown	unknown	gnl\|CDD\|335962

Protein	Function_ID	Function_description	E-value
NZ_AP014642.1\|WP_017287216.1\|4337969_4339610_+\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|381113	cd17569, REC_HupR-like, phosphoacceptor receiver (REC) domain of hydrogen uptake protein regulator (HupR) and similar domains. This family is composed of mostly uncharacterized response regulators with similarity to the REC domains of response regulator components of two-component systems that regulates hydrogenase activity, including HupR and HoxA. HupR is part of the HupT/HupR system that controls the synthesis of the membrane-bound [NiFe]hydrogenase, HupSL, of the photosynthetic bacterium Rhodobacter capsulatus. It contains an N-terminal REC domain, a central sigma-54 interaction domain that lacks ATPase activity, and a C-terminal DNA-binding domain. Members of this family contain a REC domain and various output domains including the cyclase homology domain (CHD) and the c-di-GMP phosphodiesterase domains, HD-GYP and EAL. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.1107e-53
NZ_AP014642.1\|WP_017287231.1\|4318683_4321800_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_AP014642.1\|WP_017287220.1\|4333487_4334627_-\|glycosyltransferase	gnl\|CDD\|340833	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbaZ in Salmonella enterica has been shown to possess mannosyltransferase activity.	1.15117e-173
NZ_AP014642.1\|WP_017287236.1\|4312689_4314333_+\|iron-uptake-porin	gnl\|CDD\|335962	pfam04966, OprB, Carbohydrate-selective porin, OprB family.	3.28849e-41
NZ_AP014642.1\|WP_017287235.1\|4314667_4315690_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|225915	COG3380, COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only].	7.0368e-91
NZ_AP014642.1\|WP_017287223.1\|4331174_4332251_-\|GDP-mannose-4,6-dehydratase	gnl\|CDD\|224014	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane].	0
NZ_AP014642.1\|WP_026148516.1\|4334815_4336279_+\|site-2-protease-family-protein	gnl\|CDD\|100081	cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with additional putative N- and C-terminal transmembrane spanning regions, relative to the core protein, and no PDZ domains.	1.11038e-48
NZ_AP014642.1\|WP_017287225.1\|4328733_4330203_+\|redoxin-domain-containing-protein	gnl\|CDD\|215497	PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein.	2.1881e-140
NZ_AP014642.1\|WP_017287224.1\|4330207_4331158_-\|GDP-L-fucose-synthase	gnl\|CDD\|187550	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs. GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.02616e-157
NZ_AP014642.1\|WP_017287221.1\|4332665_4333388_-\|sugar-transferase	gnl\|CDD\|376775	pfam02397, Bac_transf, Bacterial sugar transferase. This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.	3.69313e-91
NZ_AP014642.1\|WP_017287215.1\|4339613_4340051_+\|anti-sigma-regulatory-factor	gnl\|CDD\|225083	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms].	1.99027e-28
NZ_AP014642.1\|WP_017287233.1\|4316621_4317875_+\|O-antigen-ligase-family-protein	gnl\|CDD\|225844	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane].	3.82199e-10
NZ_AP014642.1\|WP_026148517.1\|4324536_4325778_+\|ferredoxin--NADP(+)-reductase	gnl\|CDD\|99804	cd06208, CYPOR_like_FNR, These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain. Ferredoxin-NADP+ reductase (FNR) is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins, such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap between the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2, which then transfers two electrons and a proton to NADP+ to form NADPH. CYPOR serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases, sulfite reducatase, and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. CYPOR has a C-terminal FNR-like FAD and NAD binding module, an FMN-binding domain, and an additional connecting domain (inserted within the FAD binding region) that orients the FNR and FMN -binding domains. The C-terminal domain contains most of the NADP(H) binding residues, and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule, which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	1.28212e-153
NZ_AP014642.1\|WP_017287234.1\|4315771_4316614_+\|hypothetical-protein	gnl\|CDD\|227078	COG4735, COG4735, Uncharacterized protein conserved in bacteria [Function unknown].	9.93934e-64
NZ_AP014642.1\|WP_017287218.1\|4336300_4337014_+\|hypothetical-protein	gnl\|CDD\|350277	cd18710, PIN_VapC-like, uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons. Matelska et al. recently classified PIN-like domains into distinct groups; this subgroup includes some sequences belonging to one of these, PIN_4-2.	6.9646e-37
NZ_AP014642.1\|WP_017287230.1\|4321918_4322656_-\|hypothetical-protein	gnl\|CDD\|237864	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional.	0.00623184
NZ_AP014642.1\|WP_017287228.1\|4323042_4324053_-\|phosphoribulokinase	gnl\|CDD\|180975	PRK07429, PRK07429, phosphoribulokinase; Provisional.	0

>NZ_AP014642.1|WP_026148517.1|4324536_4325778_+|ferredoxin--NADP(+)-reductase
MYYSSASGAANTQSGNRVFRYEVIGLGQSDADGSSGSTVRKSGSTFFNVPYSRMNSFMQRISRMGGTIVSIQPLDANGSGTGNVTVEQKAPAIAQENASASSSTGSKPMTQAKAKKHADVPVNIYKPNSPFIGKCISNDELVGEGGIGTVRHIKFDISAGDLTYVEGQSIGIIPPGLDKNGKPEKLRLYSIASTRHGDDVDDKTVSLCVRQLEYKHPETGETVYGVCSTYLCNLEPGADVKITGPTGKEMLLPEETDTNVIMMATGTGIAPMRAYLWRQFKDNERAANPNYQFNGFSWLIFGIPTSANILYKGELEEMAQKYPNNFRLTTAISREQQNKDGGRMYIQDRVAENAAELYKLMKDEKTHTYICGLKGMEDGIDAALGAEAAKEGVEWKEFRSAMKKAGRWHVETY
>NZ_AP014642.1|WP_017287228.1|4323042_4324053_-|phosphoribulokinase
MTSKPDRVVLIGVAGDSGCGKSTFLRRITDLFGEDFVTVICLDDYHSLDRKQRKETGITALNPKANNFDLMAEQIKALKSGETIDKPIYNHETGEIDPPEKIEPNHIVVIEGLHPLYDKRVRDLIDFSVYLDISDEVKIAWKIQRDMAERGHSYEDVLAQINSRKPDFDAYIDPQKEFADVVIQVLPTQLIKEDKERKVLRVQMIQRDGIEGYDPVYLFDEGSTIDWTPCGRKLTCSYPGIRMHYGPDVYYKHGVSVLEVDGQFDKLEEVIYIEQHLSKTSAKYNGEVTELLLQHREYPGSNNGTGLFQVLTGLKMRATYERLTNQAGATKVPANV
>NZ_AP014642.1|WP_017287230.1|4321918_4322656_-|hypothetical-protein
MATSRRTQTSTRRTSNRRTAAKVTETPESSAPAPAETPEATSESPSPDVGESLEVNEPPIVSEQPEVSEPTDPISETALDSDFQEASTESTPKESIPEEPPMSNADVIEATATPAEGNGSAIEIRSDVPSLSIWNRPVMPSDIEIVGTITSSGERPIEASHLAVFGTILNGRPILASNLKVAEMLPGNRPIFYSDFHSVSALTLAGDRPVMASASGLMHAEKLPGDRPIFTNDVDDPSTLMGFID
>NZ_AP014642.1|WP_017287231.1|4318683_4321800_-|valine--tRNA-ligase
MIASLPTQYNASTTEAKWQKFWEENQVFKADPSQPGEPYCVVIPPPNVTGSLHMGHAFESSLIDVLIRYQRMLGKNTLWLPGTDHASIAVQTILERQLKEEGKTRNDLGREQFLERAWKWKAESGGTIVNQLRRLGVSVDWSRERFTMDEGLSAAVLDAFVKLHDEGLIYRGNYLVNWCPSSQSAVSDLEVENKEVDGNLWYFKYPIVDGDGFLVVATTRPETMLGDTAVAVNPNDDRYKHLIGKTLILPLVYREIPIIGDDHVDPSFGTGCVKVTPAHDPNDFEMGQRHKLPSINVMNKDGTMNENAGEFQGQDRFVARKNVVKRLEEEGCLEKIEPYKHTVPYSDRGKVPVEPLLSTQWFVKIEPLASRALSFLDDQTSPKFVPDRWTKVYRDWLVSLKDWCISRQLWWGHQIPAWYAVSETNGEITDYTPFIVARSQAEAQQKAIEQFGESVQIEQDPDVLDTWFSSGLWPFSTLGWSDTDAEDYKRYYPTATLVTGFDIIFFWVARMTMMAGHFTGQMPFKDVYIHGLVRDENNKKMSKSANNGIDPLILIDKYGTDALRYTLIREVTGAGQDIRIAYDRKTDESETVEASRNFTNKLWNASRFVMLNLDGKTPAQLGAPDQLELSDRWILSRFHQVAQDVRTSLDRYGFGEAAKSLYEFIWGDFCDQYIELVKSRLQGEPTTSRLAAQQTLAYVLEGTLKLLHPFMPHITEEIWHTLTQAPDTESLALQPYPNPDVSAIDANLERQFDLIINSIRTIRNLRAGAEIKPGARITVAMQTEDPQEKQTLIAGQSYIKDLARVETLSITSTADQPARTVSAPKASAIADDAPVLVMALDIVGSFIAKNQNVLLSLLLIGSIIFAIKIAATVTSGIHEIPLLAPFLEVVGIIYTIWFTKARLWNKDDRQVFFKQVQTFTREVIGEPAPIVAVAPAEEPQISEAADNVETDDVQTIVGVTGTVKISIPLAGLVDFEAMKAKIERDLKKVDAEIQSLRGRLSNPKFVDKAPPEVVQSNRDALAEAEKQAEILKSKLDRL
>NZ_AP014642.1|WP_017287232.1|4317910_4318366_-|hypothetical-protein
MLHLAQVQKKGYLGKAGLRLLAAQKSEHVWTRLPEEETVLSAEANTYADGLLVLVEISSSNQILDIREAKDWVLELVQRYLTYGITPAFLQQETERAEQWRQSLTLESQELARRAIELEARREQIQELEEELKNEKKQLEMLMSQVRAQQE
>NZ_AP014642.1|WP_017287233.1|4316621_4317875_+|O-antigen-ligase-family-protein
MKALQPHPDPNFQRHWNVVQIGLFLLPFSAFLGGTSILMVAIAIWVRKFSSLSREPVNRGFAILGLVMIAAAWFADDRANAFLGLFNFLPFFFTFAALADLIRSPKQLTQIAWIWVITSIPVTVIGILQLLNFGGMPSLLWGLISWKVFAGGNPVGRMASVFEYATILANYYAIVFILSLGLWLQERRKLLIGIVLLNAIGLILTNSRNVWAIAVLACLAFALYQGWKTIVAAVGAITGIILGAAFAPDSIALPLRKIVPRFFWARLNDQMYSDRPVNQLRSTQWKFAWNMTEQRPLTGWGLRSFARLYTEQMQLWIGHPHNLFLMLSSESGLPAAVMLYGLVGWIMAQGIWIWKALSPTNRPIYFTFWIAFLACTLFSFLDIALFDARINLMGWVLLAAIWKMEESGEWGVRLRGS
>NZ_AP014642.1|WP_017287234.1|4315771_4316614_+|hypothetical-protein
MDEFRAALELATDDELRELTEILFRPKFNPLDYVNAPDPIDLQSLCREDWLDAIDDRFRFLAADGITVLRRKTGQVSYRQVLIQVCRYLKLPYSASMSTTDLEAEVFLSLLNRAWKQLPASEQTALTNRIQNTLSKTDFVADLPLSLQKNPMSLVVKGGSALAVNTVLQPLLLQHIARQFALHFARYQVAQQAITQGGIAAATQIQTQVSMQLARRGMTMASARYTASRAAFAFVGSALWAWFLADLGWRAIATNYGRVIPTIFALAQIRLTRSECFEPI
>NZ_AP014642.1|WP_017287235.1|4314667_4315690_-|FAD-dependent-oxidoreductase
MLDSQFEIAIVGAGMSGLTCAQMLHQAGYKVVVLDKSRGLGGRMATRRLHGTHADHGVCYLKPKSDEFQNLLDQLVDRQVSRVWTDRIHEWVDGQIRAPESQAACYVSPTGISAIAKFLSAGLTLKLNHRVTEIKPGWQLHCESGETISAQVVVIAIPAPQAAQLYEWDKLNQVEYSPCISAIAVYPAERQSEVEQLPWKALICADSELGWIGLDSTKQIHPVQPAVVVQSNAAFATRYLEDLDLQKVGERLLERASEVGLPWLTSPEVLQVHRWRYAFPIQPLPESFLVADTEQPLMFTGDWCGGNRVENAFQAGMATARELNRRLENRSLGERFWWQI
>NZ_AP014642.1|WP_017287236.1|4312689_4314333_+|iron-uptake-porin
MTKSLFVHSLVVAASLGIATSATAAEVAELTAQEPFNQVTSVSQLSDVRPTDWAFQALQSLVERYGCIAGYPDRTYRGNRALTRYEFAAGLNACLDRVNELIAAATADLVKKEDLATLQKLQEEFAAELATLRGRVDSLEARTSTLEKQQFSTTTKLNAEVVLGITGVAAGRDFIRREFDPVTGTSNEVVDRVSRNTIVGNRVRLNFDTSFTGRDILRTRLQAANLSALPAGINGNTLTNEGALRFAGGENNELGVDALNYTFPLGEKTTVVIEANAGAIDDFTDTLNPYLDGDGGSGALSHFGTRNSIYYLGNGAAGTGVGVRHKFSDALELSLGYLAGEPSSPAPGNGLFNGSYGALAQLTFRPSERLGIGLTYIHAYNVDFSGNGAVGSTRANFRSLAENGFLADEVPTSANAYGISASFQITPQVVFNGSVGYTNAQSLQPGNRGDLDIWNWSAGLAFPDFLKKGSLAGIIVGMEPRVSSSSGTFGQAIGRDRNTSLHIEGFYQYQLTDNIAITPGIIWLTAPNHDNRNDDIVIGTIRTTFTF
>NZ_AP014642.1|WP_017287237.1|4311128_4312535_+|hypothetical-protein
MKKIGAVPWKSVGSFLAIASAAGCVVTSIWLSTEFIMDPKSVAWMNRYLPDDAQIPISAWDDPKSLKEVQADLRKAGLYAGEVVRVETVKQGKPKQIDILMPVFRPQADQDDRLVELRAYRLVKNSTARKPEALQFVNQIEVREMREDFVTEPLVRARAMNPSSDRELPFTNVQRLEDRAPQNGIWLNVNGKLQQGDSSIAYGQVIYYNPITTAMSAMLSWTSPDGELPTWQAVPKGRPAEFVVNQTVGLEPDFQVYQLRSVKRKNIPFQLQPISLSQPAIANGAFTDALFLARSGLWSNASEYLKSVKRRVGSAWTPAAQAQMDLIDRHAKITKTQADQPWANVSQQILANLLDGRWDRAAQVMEKSSIDHPEVLDVLKYDPGRVQKRINAALQFNPSRSEVQMWGALRMATQQGKPNAIAWLKNQPLDSSARRAQTLKMINQLDAMTFGNLMPADEPAKTSQNKKI
>NZ_AP014642.1|WP_017287225.1|4328733_4330203_+|redoxin-domain-containing-protein
MVRAPEFPKNLTWLNVQRPLSLKEFRGRILLLDFWTYGCINCIHSLPDLKYLEDKYHDLLTILSIHSAKFENESSIKNIRQAILRYEITHPVLVDRDFQVWESYAVRAYPTFVLIDANGRIVRTIAGEGRRELLDQLIGELVNGIEPKDIQFELEEMPILPLAFPGKVLASDRLFIADSGHHRIVVTTFEGEVLDIIGTGFSGLKDGSFDEAQFSNPQGMTIHQNILYVADTGNHAIRCIDLEKRIVSTIAGTGNQSKTIYPHGGKALEVDLNSPWDLVWNGDRLFIAMAGAHQIWEMQDDVIQTFAGTGAEASFDGAIQEAAFAQPSGITTNGKELWIADSETSSIRSIDLETSQVKTVCGGGDLYNFGDVDSIGEKARLQHCLDVEFAAELWIADTYNHKIKRINSDGFCQTVFTESFSEPSGISATATHLFIADTNHHAIRKIDLKTLEISSIDFPSLCAPTVCFPHYISALKKGDSKERPHEQGE
>NZ_AP014642.1|WP_017287224.1|4330207_4331158_-|GDP-L-fucose-synthase
MTSTTFDLHNKRILVTGGAGFLGRQVVRQLCESGADPQKITVPRSHDLDLRKMENCQRAVDQQDVVVHLAAHVGGIGLNREKPAELFYDNLMMGTQLIHAAYEAGVQKFVCAGTICAYPKFTPVPFKEDDIWNGYPEETNAPYGVAKKALLVQLQSYRQQYGFDGIYLLPVNLYGPEDNFDPSSSHVIPALIRKVYEAQQAGAATLPVWGDGSPTREFLYVDDAARGITTALQHYSECEPVNLGTGYEISIRDLITLLCDLMEFKGEIVWETDKPNGQPRRCLDTQRAKEKFGFSAQVSFEEGLKKTIDWYRQNPQ
>NZ_AP014642.1|WP_017287223.1|4331174_4332251_-|GDP-mannose-4,6-dehydratase
MTQRKRALVTGITGQDGSYLSELLLEQGYEVHGIIRRTSTFNTDRIDHIYEDPHVEGARLFLHYGDLTDGTTFRRILEEVKPSEVYNLGAQSHVRVSFDAPEYTADAVGMGALRILEAVRDYQQRIGEQVRYYQAGSSEMYGKVQQVPQTEETPFYPRSPYACAKVFAHWQTVNYRESYDMFACNGILFNHESPRRGETFVTRKITRAVAQIVAGRQKKLFMGNLDAKRDWGYAKDYVRAMWLMLQQEQPDDYVVATGETHSVHEFLDIAFGRVNLDWKDYVEFDERYLRPAEVDLLIGDPAKAKKQLGWEPSVTFEELVHLMVDADLQALGISTPGNGHAKVADYATVRQNLAGVSF
>NZ_AP014642.1|WP_017287221.1|4332665_4333388_-|sugar-transferase
MTADSQFVPGKRIRSIFKRGKPIGKPSIFNTRNALETDFAKRLFDIVFSLSVLILFSPVYFILALLIALSSSGPIFYVQERVGKDFKRFGCIKFRTMVRNADEVLMDLISTSPQMREEFETTFKLKSDPRITWIGKFLRITSLDEFPQFWNVLVGDMSVVGPRPLVVEELPKYGAHIDKVLTIRPGITGLWQVSGRNDIPYPQRVRIDVYYASCHNFLLDLWIIVKTIGVVVFPKNNGAY
>NZ_AP014642.1|WP_017287220.1|4333487_4334627_-|glycosyltransferase
MNLKYALVHEWLTPKATGGSELVVQEILKHIDADLYALIDFESVNPNSYLYRRKIGTTFLQHFPFAKNGVQKYLPFLPIAIEQLDLHEYDVILSSYHAVAKGVITSPHQLHICYCHAPMRYVWDMTFEYLRNSRVGHGIAGIFTRYLLHQLRQWDVISSNRVDYFIANSHHTARRIWRCYRRSAEVIYPPVEVDRFSYEPQKQDYYLTVSRLVGYKKIPLIVQAFNQLDLPLVVIGSGAELSTIQKIAKPNIKILGWQPDDVVEQYMKQAKAFVYAAYEDFGIAPVEAQACGTPVIAYGAGGTAETVRDLREYQSQGTGILFPNQTEAAIVEAVQAFEQHQAIFQPEASRSFAMNFHPDIFKQRYLDFIDRAYREFQSR
>NZ_AP014642.1|WP_026148516.1|4334815_4336279_+|site-2-protease-family-protein
MITALAVLVALGILAVGFNRARPYGKLGILAWFQSVVLMSPWIIFFGLFSAGIYLNLAGMLLLFVISTGIYIWIGRKLRAEGQEFLAQRAAAKVAIESAFPKSDDATEAPVMIPPESLSIPNEDLQAIKSIFGIDTYFLTETISYQDGAIFKGNLRGDPDSTHAKLTENLKAQVGDRYRLFLIENQEEKPVVVVLPSKNDPKPLTLTQTLLSIVLFLATIAASLETGGILLGFDFYGSPERYAEVLPFSIGILAVLLAHEFGHWIVAKRYQIKLNLPFFIPTWQIGSFGAITKFASLLPNRSTLFDISVAGPLAGGAVAFGMLIAGLLMSHEGSGFKVPTQFFEGSILVGTLARVIMGAEIQRSIVEVSPLVVLGWIGLVVTAINVMPAGQLDGGRIVQAIYGRKIAARATVATIIILGLASFVNPLALYWAIVIVVLQRTPERPSLNELTEPDDARAGIALVVLFLMLMILLPLTPSLAGRLGIGG
>NZ_AP014642.1|WP_017287218.1|4336300_4337014_+|hypothetical-protein
MLDAPEIFLLIDLNTLFACKPYEWLEFSPMGRCFVPEAVHQELEAWAGHRSDTAESKIAREYCRLMLEGDWYLARSPIPADTQRPFTRRARLAIDVRNSAESLAQSSPRQLVVVVSNDRALLQQLHALRLDNLTGVPVSTFLTWSRTKRQPPVVIQHVRSMQSHSLQLLSAGNHRHLRPFLTSNYPKFSSQPVYHSTWRDRVLPLLPLILILSGLTLGWCFAQPFIQQLPSTSEQNQ
>NZ_AP014642.1|WP_017287217.1|4337070_4337850_+|hypothetical-protein
MRSPVQIISAIVLMSALSLGSGIPLLQASAAPIRHPTVLLTTAYPKTLSWRVRKDLARRVGIPTTELRVMQAERKTWGDGCLELPKTDEFCTQQLIEGWKVVVAHQNQTWVYHTDLQGRLLRLAESQPSELLPKNVVFRSRMSGGFAGQTYDTILLSDGTMQQAIDMGGDPRRTQSASSSASLRAWKITPQKVEEFRELLKREQFQNFNRKTYSPPQGAADFFIVTLASPVGTVQYADIEQENLPRSLQTIIQAWNALK
>NZ_AP014642.1|WP_017287216.1|4337969_4339610_+|SpoIIE-family-protein-phosphatase
MRREKLKLLIVDDEPDNLDLLYRTFRRDFDVIRAESAIEALKVLDEQGEVAIIISDQRMPEMLGTEFLSRTVDRFPDTIRIVLTGYTDVEDLVDAINSGKVFKYITKPWKSQQLQVVVEQAAETYQVLKQRTADLRRALRRESSLNAITTAIRESLDYQNMLHTIVETIGLTFEASCCMLHPVEGERLKSNSAMYCAVNVPFKSCEDDRTSDLVQIVLHDSTARMKSQNPPHFVLPLRYQKDLLAILSLHRESDQPFWSTEDLELIEVVTEQAALAISQARLYRRTQEQAEQIRAELEVARQIQTNLLRQTLPRLDNLKVQACCHPAREVGGDFFEVYQHPQGDLWLAVGDVSGKGVPAALFMASAISVLRRELSQEVSPEPDEVMRNLNSILSQDLMGTNCFITMVLARYTRSSGQLVYANAGHIYPLVWSKHTIAQAIEPTYLKVRGIPLGILPKWNAIAGKRLLQDGEILLLTSDGITEATVRPEGEVNLASDPARAMLRQTGLWKLLQQAGESLDLKQLLAQIQAHNAIQEDDQTILSLEVL
>NZ_AP014642.1|WP_017287215.1|4339613_4340051_+|anti-sigma-regulatory-factor
MKTELHVPSDLRFLTVVESWLLESLKIEIGDQIDWTRQSSRLRLALVEAYSNVVRHAHRNQPDLPVVVRLELRDRDLAIEIWDHGQGFDISSYLAPSPEMMQEHGYGWLILNRLMDRVEYQLQVNGRNCLKLQANLLEMSAQSSR

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Crispr_ID: NZ_AP014642_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014642_11

5783321-5783574

TypeV-U5

Consensus_repeat	Method
CTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACA	PILER-CR
CTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACA	CRISPRCasFinder
CTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACA	CRT

3 spacers

c2c5_V-U5

The CRISPR arrays of NZ_AP014642_11

>merge|NZ_AP014642|11|5783321-5783574|PILER-CR,CRISPRCasFinder,CRT
CTTTCAGCCCACCCATTCGTGGGAGGCTGATTGCAATAATCCGATCAGCTGGCACAACAAGCATCATCTTTTCTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACATCGGCGTACTGATTGAGCTGCTGATCATCCCAACTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACACGAGCATTGGTGGGGTTTCCCCAACTCATTCTCGACTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACT

>NZ_AP014642|11|2|5783321-5783574|PILER-CR
CTTTCAGCCCACCCATTCGTGGGAGGCTGATTGCAATA	ATCCGATCAGCTGGCACAACAAGCATCATCTTTT
CTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACA	TCGGCGTACTGATTGAGCTGCTGATCATCCCAA
CTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACA	CGAGCATTGGTGGGGTTTCCCCAACTCATTCTCGA
CTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACT

>NZ_AP014642|11|9|5783321-5783574|CRISPRCasFinder
CTTTCAGCCCACCCATTCGTGGGAGGCTGATTGCAATA	ATCCGATCAGCTGGCACAACAAGCATCATCTTTT
CTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACA	TCGGCGTACTGATTGAGCTGCTGATCATCCCAA
CTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACA	CGAGCATTGGTGGGGTTTCCCCAACTCATTCTCGA
CTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACT

>NZ_AP014642|11|4|5783321-5783574|CRT
CTTTCAGCCCACCCATTCGTGGGAGGCTGATTGCAATA	ATCCGATCAGCTGGCACAACAAGCATCATCTTTT
CTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACA	TCGGCGTACTGATTGAGCTGCTGATCATCCCAA
CTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACA	CGAGCATTGGTGGGGTTTCCCCAACTCATTCTCGA
CTTTCAGCCCACCTATTCGTGGGAGGCTGATCGCAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014642.1\|WP_017285725.1\|5774763_5775282_-\|DUF4330-domain-containing-protein	unknown	unknown	gnl\|CDD\|379510
NZ_AP014642.1\|WP_017285718.1\|5780867_5782472_+\|DUF1565-domain-containing-protein	unknown	unknown	gnl\|CDD\|284923
NZ_AP014642.1\|WP_017285709.1\|5788599_5789082_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_154660817.1\|5779043_5779214_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017285712.1\|5786146_5786383_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017285707.1\|5791821_5794350_-\|GTPase-domain-containing-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_026148336.1\|5779472_5780615_-\|glutamate--cysteine-ligase	unknown	unknown	gnl\|CDD\|131103
NZ_AP014642.1\|WP_017285710.1\|5787915_5788314_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017285717.1\|5782485_5782752_-\|DUF3493-domain-containing-protein	unknown	unknown	gnl\|CDD\|371841
NZ_AP014642.1\|WP_026148335.1\|5795419_5796256_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017285722.1\|5777345_5778068_-\|DUF1995-family-protein	unknown	unknown	gnl\|CDD\|370448
NZ_AP014642.1\|WP_036044316.1\|5775461_5776292_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320692
NZ_AP014642.1\|WP_017285711.1\|5786483_5787761_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|377531
NZ_AP014642.1\|WP_051077750.1\|5784151_5784934_-\|hypothetical-protein	c2c5_V-U5	-	gnl\|CDD\|273793
NZ_AP014642.1\|WP_017285708.1\|5789176_5791825_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017285706.1\|5794663_5795395_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014642.1\|WP_017285726.1\|5773066_5774689_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|188475
NZ_AP014642.1\|WP_017285721.1\|5778141_5779041_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NZ_AP014642.1\|WP_017285723.1\|5776449_5777202_-\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|277316
NZ_AP014642.1\|WP_017285704.1\|5796245_5797124_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP014642.1\|WP_017285722.1\|5777345_5778068_-\|DUF1995-family-protein	gnl\|CDD\|370448	pfam09353, DUF1995, Domain of unknown function (DUF1995). This family of proteins are functionally uncharacterized.	3.4496e-81
NZ_AP014642.1\|WP_017285725.1\|5774763_5775282_-\|DUF4330-domain-containing-protein	gnl\|CDD\|379510	pfam14221, DUF4330, Domain of unknown function (DUF4330). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 165 and 177 amino acids in length. There is a single completely conserved residue G that may be functionally important.	3.39087e-57
NZ_AP014642.1\|WP_017285718.1\|5780867_5782472_+\|DUF1565-domain-containing-protein	gnl\|CDD\|284923	pfam07602, DUF1565, Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.	4.44322e-34
NZ_AP014642.1\|WP_017285711.1\|5786483_5787761_+\|IS5-family-transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	5.78842e-16
NZ_AP014642.1\|WP_051077750.1\|5784151_5784934_-\|hypothetical-protein	gnl\|CDD\|273793	TIGR01766, Putative_transposase_MJ0751, transposase, IS605 OrfB family, central region. This model represents a region of a sequence similarity between a family of putative transposases of Thermoanaerobacter tengcongensis, smaller related proteins from Bacillus anthracis, putative transposes described by pfam01385, and other proteins. [Mobile and extrachromosomal element functions, Transposon functions].	0.00641589
NZ_AP014642.1\|WP_036044316.1\|5775461_5776292_+\|M48-family-metalloprotease	gnl\|CDD\|320692	cd07333, M48C_bepA_like, Peptidase M48C Ste24p bepA-like, integral membrane protein. This family contains peptidase M48C Ste24p protease bepA (formerly yfgC)-like proteins considered to be putative metallopeptidases, containing a zinc-binding motif, HEXXH, and a COOH-terminal ER retrieval signal (KKXX). They proteolytically remove the C-terminal three residues of farnesylated proteins. They are integral membrane proteins associated with the endoplasmic reticulum and golgi, binding one zinc ion per subunit. In eukaryotes, Ste24p is required for the first NH2-terminal proteolytic processing event within the a-factor precursor, which takes place after COOH-terminal CAAX modification (C is cysteine; A is usually aliphatic; X is one of several amino acids) is complete. Mutation studies have shown that the HEXXH protease motif, which is extracellular but adjacent to a transmembrane domain and therefore close to the membrane surface, is critical for Ste24p activity. Several members of this family also contain tetratricopeptide (TPR) repeat motifs, which are involved in a variety of functions including protein-protein interactions. BepA has been shown to possess protease activity and is responsible for the degradation of incorrectly folded LptD, an essential outer-membrane protein (OMP) involved in OM transport and assembly of lipopolysaccharide. Overexpression of the bepA protease causes abnormal biofilm architecture.	1.53952e-80
NZ_AP014642.1\|WP_026148336.1\|5779472_5780615_-\|glutamate--cysteine-ligase	gnl\|CDD\|131103	TIGR02048, gshA_cyano, glutamate--cysteine ligase, cyanobacterial, putative. This family consists of proteins believed (see Copley SD, Dhillon JK, 2002) to be the glutamate--cysteine ligases of several cyanobacteria, which are known to make glutathione. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	0
NZ_AP014642.1\|WP_017285723.1\|5776449_5777202_-\|serine/threonine-protein-phosphatase	gnl\|CDD\|277316	cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.2722e-21
NZ_AP014642.1\|WP_017285721.1\|5778141_5779041_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	1.83425e-125
NZ_AP014642.1\|WP_017285726.1\|5773066_5774689_-\|radical-SAM-protein	gnl\|CDD\|188475	TIGR03960, radical_SAM_domain_protein, radical SAM family uncharacterized protein. This model describes a radical SAM protein, or protein region, regularly found paired with or fused to a region described by TIGR03936. PSI-BLAST analysis of TIGR03936 suggests a relationship to the tRNA pseudouridine synthase TruA, suggesting that this system may act in RNA modification. [Unknown function, Enzymes of unknown specificity].	5.02547e-88
NZ_AP014642.1\|WP_017285717.1\|5782485_5782752_-\|DUF3493-domain-containing-protein	gnl\|CDD\|371841	pfam11998, DUF3493, Protein of unknown function (DUF3493). This family of proteins is functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 79 to 331 amino acids in length.	4.43587e-31

>NZ_AP014642.1|WP_017285717.1|5782485_5782752_-|DUF3493-domain-containing-protein
MSQQSERLRQSDPEKYARLKAEAAAPYRGLRKFIYIAFGGSGAIGAFVFLAQTLAGRDLETALPNLALQLGVIALMVWLFRFENRSSK
>NZ_AP014642.1|WP_017285718.1|5780867_5782472_+|DUF1565-domain-containing-protein
MTRLGTSKILAIAPLGLISLLWLGGQTALKAQVTPPPETLTVPLNTVGTTILYVNPARGTDQTTAGRTEAVPFKTLKFALDQATAGTIVQLAPGTYNLQSGEVFPLIVKAGVTVRGDEATKGQSTIIQGGGDIISRSFAKQNVSMWLAQGSQVRGVTVTNENSRGTGIWVEEGSPTISNNTFANSVREGVFITGNASPTVTDNVFVKNQGNGISITRAASGQVKNNSFTETGFGLAINGTATALIEGNQIVKNRGGFVIGDSAKPVLRGNMIADSSEDGIVVLSSAQPDLGTPESLGNNTIRNSKGRDINNTTQNVLTAIGNQLDQKKIAGLINFAPGGAIAFSDVQGHWAQQYVQALASRGIITGFPDGTFKPNDPVTRAQFAAIVLKAFAPAPKNAAVNFSDVSSRYWGFAAIQSAARGGFMAGFPGGTFRPEQRIPKVQSLVALSNGLEFGAGDPSLLSRFQDAASIPTWARSPIAAATQRQIVVNYPTVGQFNPNRDATRAEVAAFIYQALVSAGKAEAISSPYVVGVAR
>NZ_AP014642.1|WP_026148336.1|5779472_5780615_-|glutamate--cysteine-ligase
MMLSKGFEIEVYTGTPQGDVVGMSDEIVAALDGFVREPDSRNVEYTTPPCFRYERSLCDLVTPRLRLRQFLKSKGDYTLIPGSTLPLAGQGDRFWRSDPANPYHDYIEKTYGTKVVTASVHINIGISDPEVLMRACRLVRMEAPLYLALSAASPWFNGEMTGYHSTRWGLFPKTPAHVPIFESHAHFIRWTEEQIAIGTMQNVRHLWSAVRPNGDRRPYNLNRLELRICDLVSDPIALLAVTALLEARLQQLIADPSLDPLQQSKLNAEDLVEIANENEAAAAKSSLDAELRHWQDGQPILAREWIEQLYAETFAIAKKAGFSCFLLPVKKILREGNEAQRWIKLSEQGLNNREILVQSIQAMQLREKELEGQICQSLVA
>NZ_AP014642.1|WP_154660817.1|5779043_5779214_-|hypothetical-protein
MMHHRFDRRMLIRLFALLSITGTIAALLPLPNFDSQARSVDSMTPLRQSLSGLYGN
>NZ_AP014642.1|WP_017285721.1|5778141_5779041_+|class-II-fructose-bisphosphate-aldolase
MLTSTRELLETARRNIFAIGAFNVYNLEGVKAVINAAEISRSPAMLQLHPSALKYGSSPLVALCLEAAEAATVPISVHLDHSTSVKDIDRVLQDGVRSIMADGSPLPYEQNLEFTRNMTRLAHSYHAIVEAEIGRISGTEDGLTIAEKEAKMTDPQQAVEFVKATNVDALAVTIGNVHGEYKSPPRLDFPRLEQIRMLLDIPLVLHGASGLPAEMIARSIQLGVCKFNVNTEVRQAYMQALKDEICGQQEKDLLEVTGEAIAAMQDVILEKLELFGSVGKAHLHETPYATVLAAAAHRN
>NZ_AP014642.1|WP_017285722.1|5777345_5778068_-|DUF1995-family-protein
MPELPDTLEDAIAQAQIATQAALEAGYTRLQVELVFPELKPMPIAEQFITMFRDRGAGLKLFFTDSGIAALAKRDWGDLPHQIRSLDVAGSRQTTPVTEQVDPEDELYVFVSPSAVEVPPVEQICNAAGERPVILLNPRLEDVATIGIGYAGRQLRQRFLDTIEPCYYLRPLDDQSAIFRCYPSPWQVWYAPDGTYELIAEERDRPDSEKLDEIFAKALGQSAKPSLFAGLQQFIKALGR
>NZ_AP014642.1|WP_017285723.1|5776449_5777202_-|serine/threonine-protein-phosphatase
MSQQPTRRIVIGDVHGHYDGLMNLLDTIAPEASDQVYFLGDLIDRGPQSYQVIEFVKNSPYQSLLGNHEHLLLEAFPNGQVYAPALQAWLQSGGRATVASYTDMDVLVEHVQWIRTLPTYLDLGDVWLVHAGVHPEMPLEQQGYAEFCWIRDEFHRSTQPYFSDKVIITGHTITFTFQGVVPGAIARGQGWLGIDTGAYHPKSGWLTALDIDNAIVHQANMYTNQVRTLGLDEVTTAIEPKPRGRQVLKR
>NZ_AP014642.1|WP_036044316.1|5775461_5776292_+|M48-family-metalloprotease
MITKILRRRWLYPVLSIAIAAGICFGQPMLAQAISWTDLLRGGIQIIQANQLSRLSDSQEVDYGRQINNQLTTQEVRLVNDPKLTAYVNEIGQRLAANSDRPNIPYTFQVVDQKSINAFATMGGFVYVHRGLLDAADNEAQVASVIGHEIGHIAGKHALNQMRQTAVQRGLLAAGGLDRSTIANLGVQVALRLPNSRRDEYDADARGVRMMGRAGYAQSEAVTFMRKLLNSASPPTFLANHPATSDRITRMQQLIRQNPGSGTAGLDPASYRARLR
>NZ_AP014642.1|WP_017285725.1|5774763_5775282_-|DUF4330-domain-containing-protein
MAIVDSQGRLFGKISILDVGAALVILLVVVGIFVYPGPTGAGAQGARQPVEVDVVVRGLSASNPKSFIKVGDTTNILVRKQPSGSVKLKELRFLPRTVATPQPDGTLKVFPDPRPELALTNDMLMTLTNEVPIVDGTPVLGGEKVKVGTTIELDGPTYTFGTTVVAIRINKS
>NZ_AP014642.1|WP_017285726.1|5773066_5774689_-|radical-SAM-protein
MTSPFSSERLLFTPATPQADAIPLIFAFPNEYSVDITSLGYQVVWATLAARSDLDVARLFTDIHEPLPANPELLGFSMSWELDYVNILGVLESLEIPIWSRERSHSHPIVFGGGPVLTANPEPYAEFFDVFLLGDGEILLDAFVHAYQEVRHADRDTQLKHLARVPGIYVPSMYQVTYQSPDGAIASITPIDATIPAQVQKQTYRGNTLSASSVVTEKAAWENIFMVEVVRSCPEMCRFCLASYLTLPFRVADVEDSLIPAIEQGLTVTNRLGLLGASVTQHPEFESLLDHLNQHRFDDVRISLSSVRTNTVTEKLTRTLVKHDAKSITIAVESGSDRVRKIVNKKLETDEIVQAAVNAKAGGLNSLKLYGMVGIPGEESADVEQTVAMMRSLKKAAPGLRLTLGCSTFVPKSHTPFQWFGVNPQAEKRLQSLQKQLRSNGIDFRPESYNWSVIQALLSRGDRRLSKLLELTRHYGDSLGSYRRAFKELKGQLPDLNDYVFDRWTVDRVLPWSHLQGALPQSTLEKHMASSFPEPLAVGH
>NZ_AP014642.1|WP_051077750.1|5784151_5784934_-|hypothetical-protein
MNHLALYCTFDTRLMSAEGTLEAQQEKVAKTLKKLTHPNPDPRNHSTLDRLQNLPERPSRTPYVGNPEILVGISIGLADPITVAVVNGRTGEILAYRTPRALLGEQYHLLNRHRKEQQHRLQRHKNQQRGVAYQPSESELGQYVDQLLANSTIDLARTYQAGSIVVPNLKNVRDLLASEIQARAEQKCPGSVAAQKQYAKAYRQAIHQWSYNRLIQAICSQATQRGITVEVGSQPLKGNPQELAKDIAIAAYYARAITAK
>NZ_AP014642.1|WP_017285712.1|5786146_5786383_+|hypothetical-protein
MEVSDAGCRVFHNSFRDFIRAELSPEQLQRLDQSILFSYLDKQRNQLLWFMYAHRYAEAAKAYSYLMTSYEQGYISRP
>NZ_AP014642.1|WP_017285711.1|5786483_5787761_+|IS5-family-transposase
MTGFSKTPSGKSSSEAPKLKAQLNAQHALFKLANLLDWESLEQDFGTTMTTDGGRPPLPVRLMVGLHYLKALYNESDESVVAKWVENPYWQYFCGEETFQHQLPCHPSSLGNWRRRVGVDGLEKLLSQVIKTAMQCEALSPQDVKQVIVDTTVQEKAIAFPTDARLYDKARRTLVRMARKHQVKLRQTYVRVGKQVLLKQSRYAAARQGRRAQKQTRILRTYLGRVIRDLERKLKPMPEAVAVLLKSAKRIYQQQKQDKGKCYSIHAPEVECIAKGKAHKPYEFGCKVVLTTTNASNWIVGIAAQHGNPYDGSTLTPAIEQVERLTDIRPNHATVDQGFRGKDHHPQDVEVLVCDTRKRTGKARRLFKRRSAIEPVIGHSKSDHCLGRNYLKGQLGDSLNALLAGCGFNLRKLFRAVMVLEVEPA
>NZ_AP014642.1|WP_017285710.1|5787915_5788314_-|hypothetical-protein
MYRREIRYTCRGDMQMLFSMNPRICASCPVKQHCLSDDSKNTKGRRISVIRMKLPPIPAVVLEPEITVIAQTPIQTVQGTQALIWTDIPATQLRREIRQHLRRHQTRIEQSHSATQPVESAIVYLTRSQRAY
>NZ_AP014642.1|WP_017285709.1|5788599_5789082_+|hypothetical-protein
MEPLSLLAGAVTTYIIPKALEKVGEKVGEVALTKGSEMVQATRDAVQNKLKSTNTDGVLAIAEADPTEANLEMLETILLSQMKSDPDFATLLRDFVNRIQSQSPMLQVVLDSVRIKNSVEIGNIEQISEGSAAEQVVGRNLGVGGDLKIGDIRQSVHRKL
>NZ_AP014642.1|WP_017285708.1|5789176_5791825_+|hypothetical-protein
MSQPNLEQSIFEDVDVGGDFTVGDITQIGSQTVIQQKPDFFEPALDRYKPSTFKSPNLISQLLTRLTNQRFLVLAGSSDVDKDSLAKHTAACLIESLSAQRMEAISKEWYRSSDPQSIDIELQNTEKTTVFILTQVNPQSFGYDLARIQKAANLCKHYIVMSTDVTFAAWRQPSSTKLFWYELSRGSVADAPQLINTLSQEEALSNWYHHHLKQPRDRLLALGLSFFDGLFDDQFFAALEEIVERVWQRRDASLRALDYRDLENLHTFFNFTETKNQGTKIAIRFPKQRRTLFKIAWHSDRRQILSALPVLVDLIRQSVVGRLANLELYGSDTKCKEIRTVIAETISDIGSISENAIQTTLLQLSADPNTDVQATAAYAMARWRDPEYSLDQQLFKTLHSWLDLMQARHIIAQVEAILRGRNSESSKSSKAEDYIKITVALTISYAALYDAPRGMEGSTGLSQECCDLLEKLATDPSPVVRDVFLSYTLPRALQIHLRQLRQWLQDKIQQQVSPTHSHSAIINFNQAIAASLAGTYRRDSEATIKILEHWEDEGRKRLSEVIDPAKVTSRESLLATVARTYGEIEPQPELGQLTASSIVDRLQQMLQGEKHPFVREAILFALCRQARSHFDEIEFQLQSLVANLQESEWQEIADLLSDIYVEQRVQLSGGDYWSAKPIQIGNYSYRYQIWTKQARPQTQIEEAMYHSWLTSESNPAAQQIALRAANAFADRVDRDEEQEQQRILNNLDREQTAIVPQPKQMPTRSTYNPLVKHFVPWLAVFLKWLQYGLFKRIYCNALTGRWSYYQNTVSNILPEALKQDLSSRFTMAFVIGRLRGLGSRDVQIIVDLLDLSIVIAKNPGSVVIIGLLLVGGLGWLLTLFGR
>NZ_AP014642.1|WP_017285707.1|5791821_5794350_-|GTPase-domain-containing-protein
MSRAEKIEQIIAKRQPLVAIVESNKANLITLSTSLESLQERCSQLLTHRTEVEISKGLRKKLDELRSEIATAIADLDRLMVRFKRPTLNIGVIGRARQGKSRLLRSLTGLSEVEIPDSRGEFCTGARSKILHSDSTESATGQAYFYSEQDFLQEVIHPYYTNLSLGELPATLDALKEIPALPENKQTLSGRALYGHLRKTYVKQLDDYRPLFLKGDIPITAAEIRDYVTQDQTNDQGKPILNYLAVREVVITCRFPQADIGKIALVDLPGIGDINYVDEERLTNTLRQDVDFVLFVRMPGSKGDSLQDFDVQLYEKARESLKELPIQLWSMMVLNWVKGDEKTDNFHLCEKYISRMDEFNIEVSDRVIADCDDSREAQTKVLDPVLDYLAHEIEALDKQYAQSCQAQLDQLQRKVLVELEKASTILVQADLYQIFQENFETFWKRDLPGALEDFIIDKSRKRKDSEAQFKAKVANVIKKCQTETRLPSSVDVKITRDYHESFNTAYNSYLPRLRADLARQFLSLDGQFQDYLETVKSELTDVLVKKAKLKGLSSAKGSQFFQDVLERIRAVPGAEAQFREIQLGFETLSVFNVSYAGIIQRQVRAYLDKLTPDESEVADLKPITSSQIHEQVLEIVKSASPEAVKGLTFDHCLEVIKQAFPEPSPVPSNPSGETIAFTLSHFLKSSDVLVLWQLPVVKMMIEFGLERLKSAIAQSPEVLPSPRVIHSELLEKDPDVDRKLPIEQIEATLKLLRDRTIDGCDAVLQQMLHEPNEVAYVMVREFVDRVLRAESAEREWNRFLHREQIHVWEELRQIETRANQQQEWQKLVDAAKHHASNLKVIA
>NZ_AP014642.1|WP_017285706.1|5794663_5795395_+|hypothetical-protein
MAIVYIGDRKAGKTHLALELINPRGHYVKVSGIDYDSLKANLFGTEDTIRATDSIREHPLEVNVQLPIPKPLLVKWMDTPGEIWRSSWQTDNQEDWLSFLGTVTQSEGVLLILPPYREILKPTIDPQPYMTQRQWCNRFDSWVEFFISHCAKARHIAICLNKADLFCDYEAEAQKLIYNPNGRQMAWLDRHRYVSQRYFHPIQAQIDRINTQRDCAARCFITSIHSRTLLELPWIYLASFLSA
>NZ_AP014642.1|WP_026148335.1|5795419_5796256_+|hypothetical-protein
MSKPGQHNQIITIIGSRRTGKTTFMAGLAYWHRQFKSQRFTIDPVGEDTHKLADKAENMICQGLSLDPTLPTDNIDELPEYSFDIWIKQPFKKERIVLVARDYPGEVFDSINGADSLHSDYIDECFQQRVGGCLILLDRWDDDAYYVPRIQKFVQLLHDYGRADLRVAIAISKCERGEIWPCRLDPKRDLFETHLPRTTEILKKGIAKTKLQFFAISTFGVLDPITNPRPNRRDEIVFHEEFGEQRFCYLRERKVWQPYGLMAPIYWLAKEARMSSGH
>NZ_AP014642.1|WP_017285704.1|5796245_5797124_+|hypothetical-protein
MVTKFGKKESQIQNATLRVIGDRAAGKTTYMAALARSIIPPNSPVQSVTPFGEDSKSLVAMAQNVLEQGLEPEPSPLDSTLDLKDYGLTITLRDQFGWSFQGARTTTLNIACKDYPGEFLRDLIFKPESLRFQDYLEDCVRANGLLLLLDGTAYRKDKDYATSVEQLLLALDQENRGASRQRIAIALSKCEQPELWVHRFQPQKAVHDRFPKLCAKLATWQQDGAIQTECFTLSAYGSLGTYTPEPNMRKTYRDQGGTRAVLKNPRLWQPFGLVAPLYWLCTNKRHPGLDKE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP014642_5	5.5\|2695691\|18\|NZ_AP014642\|CRT	2695691-2695708	18	NZ_AP014642.1	2695487-2695504	1	0.944
NZ_AP014642_6	6.1\|2754185\|30\|NZ_AP014642\|CRT	2754185-2754214	30	NZ_AP014642.1	2754377-2754406	1	0.967
NZ_AP014642_6	6.2\|2754245\|18\|NZ_AP014642\|CRT	2754245-2754262	18	NZ_AP014642.1	2754389-2754406	1	0.944
NZ_AP014642_6	6.3\|2754293\|30\|NZ_AP014642\|CRT	2754293-2754322	30	NZ_AP014642.1	2754377-2754406	1	0.967
NZ_AP014642_6	6.4\|2754353\|18\|NZ_AP014642\|CRT	2754353-2754370	18	NZ_AP014642.1	2754149-2754166	1	0.944
NZ_AP014642_6	6.1\|2754185\|30\|NZ_AP014642\|CRT	2754185-2754214	30	NZ_AP014642.1	2754149-2754178	2	0.933
NZ_AP014642_6	6.3\|2754293\|30\|NZ_AP014642\|CRT	2754293-2754322	30	NZ_AP014642.1	2754149-2754178	2	0.933

1. spacer 5.5|2695691|18|NZ_AP014642|CRT matches to position: 2695487-2695504, mismatch: 1, identity: 0.944

cgacaccaaccatgatac	CRISPR spacer
cgacaccaaccacgatac	Protospacer
************.*****

2. spacer 6.1|2754185|30|NZ_AP014642|CRT matches to position: 2754377-2754406, mismatch: 1, identity: 0.967

gtggttggtggagtggtcggtggagtggtc	CRISPR spacer
gtggttggtggagtagtcggtggagtggtc	Protospacer
**************.***************

3. spacer 6.2|2754245|18|NZ_AP014642|CRT matches to position: 2754389-2754406, mismatch: 1, identity: 0.944

gtggtcggtggagtggtc	CRISPR spacer
gtagtcggtggagtggtc	Protospacer
**.***************

4. spacer 6.3|2754293|30|NZ_AP014642|CRT matches to position: 2754377-2754406, mismatch: 1, identity: 0.967

gtggttggtggagtggtcggtggagtggtc	CRISPR spacer
gtggttggtggagtagtcggtggagtggtc	Protospacer
**************.***************

5. spacer 6.4|2754353|18|NZ_AP014642|CRT matches to position: 2754149-2754166, mismatch: 1, identity: 0.944

gtggttggtggagtagtc	CRISPR spacer
gtggttggtggggtagtc	Protospacer
***********.******

6. spacer 6.1|2754185|30|NZ_AP014642|CRT matches to position: 2754149-2754178, mismatch: 2, identity: 0.933

gtggttggtggagtggtcggtggagtggtc	CRISPR spacer
gtggttggtggggtagtcggtggagtggtc	Protospacer
***********.**.***************

7. spacer 6.3|2754293|30|NZ_AP014642|CRT matches to position: 2754149-2754178, mismatch: 2, identity: 0.933

gtggttggtggagtggtcggtggagtggtc	CRISPR spacer
gtggttggtggggtagtcggtggagtggtc	Protospacer
***********.**.***************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP014642_10	10.1\|4328280\|28\|NZ_AP014642\|CRISPRCasFinder	4328280-4328307	28	NZ_CP040831	Paenibacillus polymyxa strain ZF129 plasmid pAP2, complete sequence	25256-25283	6	0.786
NZ_AP014642_10	10.1\|4328280\|28\|NZ_AP014642\|CRISPRCasFinder	4328280-4328307	28	CP036360	Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence	409922-409949	6	0.786
NZ_AP014642_6	6.1\|2754185\|30\|NZ_AP014642\|CRT	2754185-2754214	30	NZ_CP026654	Streptomyces dengpaensis strain XZHG99 plasmid unnamed2, complete sequence	52433-52462	7	0.767
NZ_AP014642_6	6.3\|2754293\|30\|NZ_AP014642\|CRT	2754293-2754322	30	NZ_CP026654	Streptomyces dengpaensis strain XZHG99 plasmid unnamed2, complete sequence	52433-52462	7	0.767
NZ_AP014642_10	10.1\|4328280\|28\|NZ_AP014642\|CRISPRCasFinder	4328280-4328307	28	NC_027331	Citrobacter phage Moon, complete genome	10532-10559	7	0.75
NZ_AP014642_10	10.1\|4328280\|28\|NZ_AP014642\|CRISPRCasFinder	4328280-4328307	28	MG250484	Citrobacter phage CF1 ERZ-2017, complete genome	10690-10717	7	0.75
NZ_AP014642_10	10.1\|4328280\|28\|NZ_AP014642\|CRISPRCasFinder	4328280-4328307	28	KT001915	Citrobacter phage Merlin, complete genome	10545-10572	7	0.75
NZ_AP014642_1	1.1\|697880\|31\|NZ_AP014642\|CRISPRCasFinder	697880-697910	31	NZ_CP035392	Bacillus subtilis strain SRCM103689 plasmid unnamed1	20281-20311	8	0.742
NZ_AP014642_5	5.3\|2695607\|30\|NZ_AP014642\|CRT	2695607-2695636	30	MN693491	Marine virus AFVG_25M150, complete genome	18635-18664	8	0.733
NZ_AP014642_1	1.1\|697880\|31\|NZ_AP014642\|CRISPRCasFinder	697880-697910	31	MH447526	Sulfolobus filamentous virus 1 isolate S48, complete genome	7120-7150	9	0.71
NZ_AP014642_1	1.1\|697880\|31\|NZ_AP014642\|CRISPRCasFinder	697880-697910	31	MK064562	Sulfolobales Beppu filamentous virus 1 clone A, partial genome	7931-7961	9	0.71
NZ_AP014642_6	6.1\|2754185\|30\|NZ_AP014642\|CRT	2754185-2754214	30	NZ_CP043762	Paenibacillus sp. 37 plasmid pART37, complete sequence	526196-526225	9	0.7
NZ_AP014642_6	6.3\|2754293\|30\|NZ_AP014642\|CRT	2754293-2754322	30	NZ_CP043762	Paenibacillus sp. 37 plasmid pART37, complete sequence	526196-526225	9	0.7
NZ_AP014642_11	11.1\|5783359\|34\|NZ_AP014642\|PILER-CR,CRISPRCasFinder,CRT	5783359-5783392	34	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	1148949-1148982	10	0.706

1. spacer 10.1|4328280|28|NZ_AP014642|CRISPRCasFinder matches to NZ_CP040831 (Paenibacillus polymyxa strain ZF129 plasmid pAP2, complete sequence) position: , mismatch: 6, identity: 0.786

gactgctccagaagtgaaagaaacgcca	CRISPR spacer
gtttgctccggaagtgaaagaaaagctc	Protospacer
* .******.************* **.

2. spacer 10.1|4328280|28|NZ_AP014642|CRISPRCasFinder matches to CP036360 (Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence) position: , mismatch: 6, identity: 0.786

gactgctccagaagtgaaagaaacgcca	CRISPR spacer
caatgctccagatatgaaagaaacgcat	Protospacer
 * ********* .************

3. spacer 6.1|2754185|30|NZ_AP014642|CRT matches to NZ_CP026654 (Streptomyces dengpaensis strain XZHG99 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gtggttggtggagtggtcggtggagtggtc	CRISPR spacer
gcagttggtggtgtgctcggtggagtcctg	Protospacer
*..******** *** **********  *

4. spacer 6.3|2754293|30|NZ_AP014642|CRT matches to NZ_CP026654 (Streptomyces dengpaensis strain XZHG99 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gtggttggtggagtggtcggtggagtggtc	CRISPR spacer
gcagttggtggtgtgctcggtggagtcctg	Protospacer
*..******** *** **********  *

5. spacer 10.1|4328280|28|NZ_AP014642|CRISPRCasFinder matches to NC_027331 (Citrobacter phage Moon, complete genome) position: , mismatch: 7, identity: 0.75

gactgctccagaagtgaaagaaacgcca	CRISPR spacer
tgtcgctccagtagtgaaagaaaagcct	Protospacer
 ...******* *********** ***

6. spacer 10.1|4328280|28|NZ_AP014642|CRISPRCasFinder matches to MG250484 (Citrobacter phage CF1 ERZ-2017, complete genome) position: , mismatch: 7, identity: 0.75

gactgctccagaagtgaaagaaacgcca	CRISPR spacer
tgtcgctccagtagtgaaagaaaagcct	Protospacer
 ...******* *********** ***

7. spacer 10.1|4328280|28|NZ_AP014642|CRISPRCasFinder matches to KT001915 (Citrobacter phage Merlin, complete genome) position: , mismatch: 7, identity: 0.75

gactgctccagaagtgaaagaaacgcca	CRISPR spacer
tgtcgctccagtagtgaaagaaaagcct	Protospacer
 ...******* *********** ***

8. spacer 1.1|697880|31|NZ_AP014642|CRISPRCasFinder matches to NZ_CP035392 (Bacillus subtilis strain SRCM103689 plasmid unnamed1) position: , mismatch: 8, identity: 0.742

atttacgaatcggcaaaaccgcactgtccgt	CRISPR spacer
caaaaggaatcgccaaaaccgcaccgtccga	Protospacer
    * ****** ***********.*****

9. spacer 5.3|2695607|30|NZ_AP014642|CRT matches to MN693491 (Marine virus AFVG_25M150, complete genome) position: , mismatch: 8, identity: 0.733

cgataccactagcgacaccaaccacgatac	CRISPR spacer
ttataccactagcaataccaaccacttggc	Protospacer
. ***********.*.*********   .*

10. spacer 1.1|697880|31|NZ_AP014642|CRISPRCasFinder matches to MH447526 (Sulfolobus filamentous virus 1 isolate S48, complete genome) position: , mismatch: 9, identity: 0.71

atttacgaatcggcaaaaccgcactgtccgt	CRISPR spacer
tgttactaatcggaaaaaccgcactcgtgtt	Protospacer
  **** ****** ***********  .  *

11. spacer 1.1|697880|31|NZ_AP014642|CRISPRCasFinder matches to MK064562 (Sulfolobales Beppu filamentous virus 1 clone A, partial genome) position: , mismatch: 9, identity: 0.71

atttacgaatcggcaaaaccgcactgtccgt	CRISPR spacer
tgttactaatcggaaaaaccgcactcgtgtt	Protospacer
  **** ****** ***********  .  *

12. spacer 6.1|2754185|30|NZ_AP014642|CRT matches to NZ_CP043762 (Paenibacillus sp. 37 plasmid pART37, complete sequence) position: , mismatch: 9, identity: 0.7

gtggttggtggagtggtcggtggagtggtc	CRISPR spacer
agtattggtggagtgatcggtggagccttt	Protospacer
.  .***********.*********.  *.

13. spacer 6.3|2754293|30|NZ_AP014642|CRT matches to NZ_CP043762 (Paenibacillus sp. 37 plasmid pART37, complete sequence) position: , mismatch: 9, identity: 0.7

gtggttggtggagtggtcggtggagtggtc	CRISPR spacer
agtattggtggagtgatcggtggagccttt	Protospacer
.  .***********.*********.  *.

14. spacer 11.1|5783359|34|NZ_AP014642|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 10, identity: 0.706

--atccgatcagctggcacaacaagcatcatctttt	CRISPR spacer
tcgctggact--ctggcacaacaagcatcagcgttt	Protospacer
  ... **..  ****************** * ***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4687691 : 4696178

Organic_Lake_phycodnavirus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017286744.1\|4687691_4689287_+	Hsp70 family protein	F2Y2E1	Organic_Lake_phycodnavirus	1.0e-17	25.2
WP_017286743.1\|4689365_4689590_+	hypothetical protein	NA	NA	NA	NA
WP_017286742.1\|4689610_4690654_-	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	3.2e-23	25.5
WP_017286741.1\|4690684_4690942_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	2.8e-21	55.1
WP_017286740.1\|4690901_4691588_+	hypothetical protein	NA	NA	NA	NA
WP_017286739.1\|4691584_4692025_-	peptidylprolyl isomerase	A0A1V0S9I2	Catovirus	1.6e-16	43.8
WP_017286738.1\|4692281_4693787_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA
WP_017286737.1\|4693817_4694072_-	glutaredoxin family protein	NA	NA	NA	NA
WP_017286736.1\|4694103_4694904_+	SDR family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	3.4e-09	25.5
WP_017286735.1\|4694909_4696178_+	exonuclease subunit SbcD	G3MA97	Bacillus_virus	7.8e-32	28.0

DBSCAN-SWA_2

5984030 : 6056419

Bacillus_phage(50.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017285525.1\|5984030_5985173_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_051077745.1\|5985966_5987001_-	DMT family transporter	NA	NA	NA	NA
WP_026148309.1\|5987145_5987523_-	hypothetical protein	NA	NA	NA	NA
WP_017285520.1\|5988236_5988725_+	hypothetical protein	NA	NA	NA	NA
WP_144056310.1\|5989163_5991356_+	glycosyltransferase	NA	NA	NA	NA
WP_026148308.1\|5991468_5992149_-	response regulator transcription factor	NA	NA	NA	NA
WP_017285517.1\|5992151_5993264_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.3e-24	26.5
WP_017285516.1\|5993505_5994105_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_017285515.1\|5994244_5995486_+	GAF domain-containing sensor histidine kinase	W8CYF6	Bacillus_phage	1.2e-13	27.6
WP_026148307.1\|5995576_5995942_-	hypothetical protein	NA	NA	NA	NA
WP_017285513.1\|5996033_5996519_+	PKD domain-containing protein	NA	NA	NA	NA
WP_026148306.1\|5996601_5996880_-	hypothetical protein	NA	NA	NA	NA
WP_017285511.1\|5997056_5998145_-	DNA polymerase IV	NA	NA	NA	NA
WP_017285510.1\|5998436_5999789_-	AAA-like domain-containing protein	NA	NA	NA	NA
WP_017285509.1\|5999909_6003560_-	AAA-like domain-containing protein	NA	NA	NA	NA
WP_144056309.1\|6003869_6004847_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_017285507.1\|6005014_6005761_-	hypothetical protein	NA	NA	NA	NA
WP_017285506.1\|6006338_6024686_+	cadherin-like domain-containing protein	E3SSU6	Prochlorococcus_phage	3.8e-10	44.6
WP_017285503.1\|6025767_6026289_-	hypothetical protein	NA	NA	NA	NA
WP_017285500.1\|6027485_6027929_+	hypothetical protein	NA	NA	NA	NA
WP_017285499.1\|6027958_6028699_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_154660816.1\|6028862_6029021_-	hypothetical protein	NA	NA	NA	NA
WP_017285497.1\|6029563_6031849_+	PAS domain S-box protein	NA	NA	NA	NA
WP_017285496.1\|6031856_6032480_+	response regulator transcription factor	NA	NA	NA	NA
WP_026148305.1\|6032751_6033432_+	GPP34 family phosphoprotein	NA	NA	NA	NA
WP_017285494.1\|6033534_6034092_+	DsbA family protein	NA	NA	NA	NA
WP_071596133.1\|6034160_6034616_+	peptidoglycan-binding protein	NA	NA	NA	NA
WP_026148303.1\|6034663_6034951_+	hypothetical protein	NA	NA	NA	NA
WP_017285491.1\|6035002_6035965_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_017285490.1\|6036000_6036723_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_017285489.1\|6036751_6037543_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_017285488.1\|6037596_6038292_+	stage II sporulation protein M	NA	NA	NA	NA
WP_026148302.1\|6038420_6038708_+	hypothetical protein	NA	NA	NA	NA
WP_017285486.1\|6038934_6039336_+	hypothetical protein	NA	NA	NA	NA
WP_081614704.1\|6039574_6040243_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_172410478.1\|6040957_6041215_-\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_086371051.1\|6041232_6041532_-	hypothetical protein	NA	NA	NA	NA
WP_017285476.1\|6041991_6042291_-	hypothetical protein	NA	NA	NA	NA
WP_017285475.1\|6042313_6042928_-	CHRD domain-containing protein	NA	NA	NA	NA
WP_017285474.1\|6043163_6047375_+	hypothetical protein	NA	NA	NA	NA
WP_172410479.1\|6047379_6048567_+	S8 family serine peptidase	A0A2K9L1G5	Tupanvirus	2.1e-07	27.1
WP_026148299.1\|6048573_6049011_+	hypothetical protein	NA	NA	NA	NA
WP_026148298.1\|6048989_6049781_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_017285472.1\|6049714_6050980_-	ATP-binding protein	NA	NA	NA	NA
WP_036044284.1\|6050985_6051657_-	response regulator transcription factor	NA	NA	NA	NA
WP_017285468.1\|6052159_6053653_-	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA
WP_144056113.1\|6054262_6054511_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_172410480.1\|6054688_6056419_+\|transposase	IS21 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_AP014644

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP014644_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014644_1

366544-366665

Orphan

Consensus_repeat	Method
TTTCGCGTACTGTAGTGCTACGGTACATACCTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014644_1

>merge|NZ_AP014644|1|366544-366665|CRISPRCasFinder
TTTCGCGTACTGTAGTGCTACGGTACATACCTCATTCATAGAGAGCTTAACTGAAAATGGAGGACTTAATCTGATTCAACAAGCTGAATTTCGTGTACTGTAGTGCTACGGTACATACCTCA

>NZ_AP014644|1|1|366544-366665|CRISPRCasFinder
TTTCGCGTACTGTAGTGCTACGGTACATACCTCA	TTCATAGAGAGCTTAACTGAAAATGGAGGACTTAATCTGATTCAACAAGCTGAA
TTTCGTGTACTGTAGTGCTACGGTACATACCTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014644.1\|WP_017291634.1\|358089_358914_+\|IS701-family-transposase	unknown	unknown	gnl\|CDD\|379252
NZ_AP014644.1\|WP_144056419.1\|364247_364835_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291624.1\|365916_366324_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291631.1\|360175_360640_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227946
NZ_AP014644.1\|WP_017291630.1\|360908_361508_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291629.1\|361500_362151_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291618.1\|372011_372527_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291627.1\|362655_362853_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_144056441.1\|366709_367510_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|224113
NZ_AP014644.1\|WP_017291628.1\|362141_362603_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_026148520.1\|372615_373527_-\|IS982-family-transposase	unknown	unknown	gnl\|CDD\|372648
NZ_AP014644.1\|WP_017291622.1\|367478_368669_+\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|319254
NZ_AP014644.1\|WP_096735604.1\|358931_360061_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_AP014644.1\|WP_017291619.1\|371164_372019_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_AP014644.1\|WP_017291616.1\|374204_375026_+\|DNA-repair-protein-RadC	unknown	unknown	gnl\|CDD\|178801
NZ_AP014644.1\|WP_017291617.1\|373690_374179_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291625.1\|364831_365734_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NZ_AP014644.1\|WP_017291621.1\|368992_369214_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_AP014644.1\|WP_017291620.1\|369261_370467_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_144056418.1\|375267_376020_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|280533

Protein	Function_ID	Function_description	E-value
NZ_AP014644.1\|WP_017291634.1\|358089_358914_+\|IS701-family-transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.1262e-48
NZ_AP014644.1\|WP_096735604.1\|358931_360061_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.42966e-48
NZ_AP014644.1\|WP_017291619.1\|371164_372019_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	2.12447e-40
NZ_AP014644.1\|WP_017291616.1\|374204_375026_+\|DNA-repair-protein-RadC	gnl\|CDD\|178801	PRK00024, PRK00024, DNA repair protein RadC.	1.84881e-94
NZ_AP014644.1\|WP_017291631.1\|360175_360640_+\|hypothetical-protein	gnl\|CDD\|227946	COG5659, COG5659, FOG: Transposase [DNA replication, recombination, and repair].	1.66898e-13
NZ_AP014644.1\|WP_144056418.1\|375267_376020_+\|N-6-DNA-methylase	gnl\|CDD\|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	2.02566e-13
NZ_AP014644.1\|WP_144056441.1\|366709_367510_+\|AAA-family-ATPase	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	4.09882e-33
NZ_AP014644.1\|WP_017291625.1\|364831_365734_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	7.61026e-29
NZ_AP014644.1\|WP_017291621.1\|368992_369214_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.72078e-10
NZ_AP014644.1\|WP_017291622.1\|367478_368669_+\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|319254	cd16396, Noc_N, nucleoid occlusion protein, N-terminal domain, and related domains of the ParB partitioning protein family. Nucleoid occlusion protein has been shown in Bacillus subtilis to bind to specific DNA sequences on the chromosome (Noc-binding DNA sequences, NBS), inhibiting cell division near the nucleoid and thereby protecting the chromosome. This N-terminal domain is related to the N-terminal domain of ParB/repB partitioning system proteins.	1.55748e-11
NZ_AP014644.1\|WP_026148520.1\|372615_373527_-\|IS982-family-transposase	gnl\|CDD\|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.07919e-92

>NZ_AP014644.1|WP_017291624.1|365916_366324_-|hypothetical-protein
MDSSRRRIVVPISLQPADRARLEELRSRFATILKSNINTSETVRLAISIGSAASHEQVRQVVLQTTRIPRGRPPIPWTARYLDDQEEEWVREEQERLQRLRLIHELQVLRSYLVRTSDQEKRLEEICRELNMVLA
>NZ_AP014644.1|WP_017291625.1|364831_365734_-|ParB/RepB/Spo0J-family-partition-protein
MKAENDAVAINLVEDVDTKQNVQLIPLNCIQVGKQSRTYFSPHSLNLLAQSFQRYGFQGVINVRYIDRDCYEVVAGERRLRAAKLAGLKAVQCIVGDFTPEEALEFALRENLQREDLSKLEETEALLALLSLKLKLEQSHIIEVINKEGHLDRQKNNQPKSTELQQIESLLGSFGIELQTFRTKNLRTLTLPYEIRQAHLEGGLPYSSALEIGKVKDPTVRANVLQEALAQGYSVRDVQSIVQQVAQPSSRETLKPSDRVHAIARRLKKVEASIRDRVKLDQVIDQFIDVLEEIVKDRAS
>NZ_AP014644.1|WP_144056419.1|364247_364835_+|hypothetical-protein
MSYSFVVIELHVLIRRVAIDYVRFGYYRYAMREIPAGKDPLHVDAKLIETYDITQCRMTRTRRKRQGLANVVFVRQGHRFILLATEGKHPAFDRICWRDIRIAPIHFAGYSIGMKGGVPCVQVARRTWKPIERYLFAIAHRPKSEVEAAMNNLRFYSFPGVIRQKLKLVKTMNRMRRKSHRPRVELHLRLERKAD
>NZ_AP014644.1|WP_017291627.1|362655_362853_+|hypothetical-protein
MKQTASITILNAPDSANPPSTIATPIPTPAARRYVKDFARLAFASTQTVAPACHRPCAKSEDFGK
>NZ_AP014644.1|WP_017291628.1|362141_362603_-|hypothetical-protein
MVQGAGAETAIAAKLIPLVQQRWKFKFNQPVPRYGDVNVFAISPNGNLYPIKVKAIKGKVHCEGGRLFVLPNSIRERSFGGRNLLLQCRGQAEAIRVQYRIRNVYLILCFANAVMDLKVSSIDGVEIVTGADVVERLQLLDRQLNMMNSTPYC
>NZ_AP014644.1|WP_017291629.1|361500_362151_+|hypothetical-protein
MDERQRLHAALQEALVAPVKADCRSLCQLLEDAIALQPDAVCLQIGGDAIALIAEVLYLKMMAYQEVNKTDVPDEEDSGFPVLDDDDHAYERHTMSLDLESDEEEWGKPKKVASRRAPNDSVAAPVPPKRVLKMLQDLAGDEDPTGWSVAISAWLKRKKINEPIPIAQIHQSMRKLSIVELWLGLLLGGFLIEEKPNTDETFYHDISDGAVWLIQQ
>NZ_AP014644.1|WP_017291630.1|360908_361508_+|hypothetical-protein
MLWAVSKTWQNARQGNRSMARPINPKCLECSAYSVEWARVEHGPNGDGCWVEEENRCEKLRWQYQNRAEQNAKRRLEYRLRQQAKQTVAQVSFPVAQRPTPIRIIFSEEPDNFKKNVTLVHAIEFQLWVGTECYTKREPIACWGMRGDEVAKLMEEILTEFTAQYSATLNQGKHFKKFVTIHKHIRECKINHPWSLQHG
>NZ_AP014644.1|WP_017291631.1|360175_360640_+|hypothetical-protein
MPPEQWQRLSCGQGSKGEREYEWARVAINCGDSGRFQRWLVFRRSLEQIDPPQHVSYYQVFAPKDTSLATIAKVAGKRWGIEECFKLAKSQLGLADYEVRSWVGWHRHMTLVLAAQAFLTVLRAQVEPLIQCSHSASPPLALVGSPVAFKVFRG
>NZ_AP014644.1|WP_096735604.1|358931_360061_+|IS3-family-transposase
MSNQAKKYSPQFKAKVVLELLRGEKTQTEISRAHGVHRSVLTRWQNEFVERASSVFGEVGQVSEVESRIAELEQMVGKLTMQLEIAKKASSNLSDETKRQIVAELEPHYSVRQICEVLSVNRSSLYYQPVEEELATETELKSAIDKIAGEFPRYGYRRITQQLKRQGIVVNHKRVARMMKEMGIAGKAPKRRCRTTNSNHSFARYPNRVAGLKIERPNQVWVSDITYIRLGEGFVYLAVLMDVFTRCIRGWHLGRGLDHSLTLTALNKALEHYQPEIHHSDQGVQYAATGYVEVLKQRKIEISMAEVGEPTQNGYAERLMRTIKEEEVDLSEYRNFAEVYMQVKVFLEEVYMRKRIHSSIGYLTPIEFESEWRSNQ
>NZ_AP014644.1|WP_017291634.1|358089_358914_+|IS701-family-transposase
MDRLSIDPSQVFLTGQALETVYEWSNTLKSFQQRLSPYFARTEARQAAFNYIQALLSPVERKNGWQIAEQVGNENPYRVQHLLGRAQWDAEKVCQEVRQYGVEGLSESDDIFAVDETGFLKQGHQSVGVQVQYYGTTGHLENCQVGVFLAYITGKSHTLIDRRLYLPKSWADDADKRSKAGVPKTVKFATKAQLAQQMLQAAWDAGLRSAWVVADEVYGNDAGFWWWLEKTGQQPYVLTVNKKQPVVIGWQPNRAEAVKCPPKTRPLQERQETV
>NZ_AP014644.1|WP_144056441.1|366709_367510_+|AAA-family-ATPase
MTGAGGVGKTTLAANLGYEIARLGYKVGLFDLDPQGSLNVACRLNKTPAPKTTCAWIFSGFFDGTYSFVPVWSNHVKTLEVLQGGNALFKVMPNLAQTGGVDLLKDAIEQYPLPHDLIIFDCPATLETIPKAALVAATHLLIPLVPDAKAIDGTRVLLDWYAASIQELKLDSPPKILGFVINNVENGAEHQRLSQELPPYYKARGYEVFPMIRHYTAFTNAWSEGVPLRVHRTSHPAIEPLEAIVNNIVKELGGKQRGKARSTRHR
>NZ_AP014644.1|WP_017291622.1|367478_368669_+|ParB-N-terminal-domain-containing-protein
MAKRDRLDIDNFFSEVDQNQELHNLRGKVQSLEEELSQNVEREQQLVSEIEHLRSQMLDPKEQAQLETQIGVLRDHLKGTQGVVKYPVNKVHRNPNQPRQTFDEEVEAMRLSLLKEGQLDPIILFEDGMLFDGECRWRSAEAMGWETIDAVFTARPQDDKTLRRRAYLTSLHRRGLNALDKAETLVAIASDEIPDLPQEDVSRIVNRVLIRLKRKNQSLGDRLHLQPQEEQQRVLEELGLEEIEVQTFLVFLGLQEHPASLNRNIFPTLNLFDDLKAAIRTQRLGCPQALLLNGLSAQKLGITEKQALKLRQKAIKEVTSRNLSTIETRRWVAEQRKQSSKSGEAEDSSGEHRNEQVDQVIHVIRDLSLKDALPVEQRNELKTVLKNVLAQLEKMV
>NZ_AP014644.1|WP_017291621.1|368992_369214_+|helix-turn-helix-transcriptional-regulator
MTFSEWLCFKRKRSQIRQKDLASALGLSKQTISSWETGESFPKLTPLQMQILCEKLDCSLSELASYQAVAEAP
>NZ_AP014644.1|WP_017291620.1|369261_370467_-|hypothetical-protein
MHSTQSSSPIEGGYCLLSQATLTNVLGALIDRAISYRAARVFFACCSMRSIREAAARCQIRKHQKIQFRFDEIRQRVGTQSEKLIRADLKQLERSGLLSFTQDAIEVVTVPINFTQSFDLGRSMRRLIPVPRRILEYLAQCPSPSVLRGIIVYVLRGLTLRQGIVYACGSVKSSWVAQIAHISLRAAKSVRAHLIEIGWLTKDTGSTQRKLNATGAFFRINTQWRRSSSTTKQPRAVDNSTTSDSQSAPLIAKLGSKSAPPIQDLKTSTNSKDQKSSKSLPGVYQQTQKISPPILHNIQANDLYHFHRLELLYWQAIAAKWLIHSEASTLNWICAAVRAREVVKRSGGNAVKVFVTIVRRKLWNTITGTQEDYARKSLVRFRETCPQLFRHRSESDRRISV
>NZ_AP014644.1|WP_017291619.1|371164_372019_+|ParA-family-protein
MKRQHQTLVIGIGNQKGGVGKTTMTIQLAYALAEQGHKVLIIDLDVNAGSTKHLGIDPRAYLGTFEVLLGDEDPLTAIVTHEDEGHSLPESLHLLTGSRKLEELEERLRAKKSKFDDTPLHDVLKPVIKKLRGYYDFIFLDTPPSAPLPIVAAYKAADGFLLVAIPEGLAIQGLQEALHDIEEVRKYGNPDLQLVGLAIGAVDARTRLSRELIAYVDKEFKEYVLKPVIQRSTIIPTAQTQQKSIFQTHPDHAITQCFRDMAQEFKAKIARFFDRQTFDEVDHG
>NZ_AP014644.1|WP_017291618.1|372011_372527_+|hypothetical-protein
MGKRATVLDVNYNPVGSRLQRVISPLSDLDQSLTVPQDSEPLDQSKPTELDEGAGNSQSSLTAMARSQPKAGERREIMSSEIRVRCTNSERKKWQDFAYRLTGEPNTFSHIFRALLVLLEHAEEDFGRMSELVRLLTKPPKNDPLQVALFEHKIAQILWESMRRSGRVERK
>NZ_AP014644.1|WP_026148520.1|372615_373527_-|IS982-family-transposase
MEPIVSRLDLTALFCDVDDFCQTFEWAWAHQPQLPSMPGEKRSRSRLRLSEVMTIVIAFHASGARTFKDFYTLTVLPHWRKAFPNLVSYTRFVELMPWCLMLLCCFLMTRRGEMTGIAFVDSTPIEVCHPARAHSHKVFKHQVGWGKSSTGWKFGFKLHLIINEHGELLAFKLTPANTDDRAPVAEMTEGIFGKLFGDRGYISQKLFEELYERGLKLITKRKRNMKQKLVTLMDKILLRKRSLIESVNDQLKNICQIEHSRHRSYWNFLVNLMAGLIAYTYQPKLPSLDLQPKGLPALPPAIF
>NZ_AP014644.1|WP_017291617.1|373690_374179_+|hypothetical-protein
MSRDQFEAIVIRNFLNAETMSRYLKVDVSVIEAWINDQAAIPDAAIMLLMQLDSLLSQACEHVIQTARSQSTATMPLSTIPIITYLTESDFQIYCEDAQILGSVGIHQGFVMRVISELRHLGFNAYRVPFDQHQYLSWLQSEGYINSSASRLLWAAEQRFDN
>NZ_AP014644.1|WP_017291616.1|374204_375026_+|DNA-repair-protein-RadC
MREEIHHSLETDWADFSISPTLKSSYAAAKRSSDPTLTLRHYPQGETPRERLLTEGAGHLSNTELLAILLGSGNASQGESAVALAQKLLAHLQNHLDDATRSLREAKPEILMQVNGIGEAKAATILAAIELGRRLFLQSPPIGTVIDSPELAAQALSKNLMFQPQERFAVLLLNIKHQLLGQQLIAIGSGNQTCVHPPDVFREAIRQNAARLIIAHNHPSGNLTPSSEDIALTKQLLDAGQLLMLPVLDHLILGNGDFLSLRTTTTLWSEISS
>NZ_AP014644.1|WP_144056418.1|375267_376020_+|N-6-DNA-methylase
MPYNAGAIPKDERFNEREAQYFAIAKRHSEKEMNAFASLLGMTTFAVQTFERDFLGPIYMDFGANERNGEFYTPESLGITMARMTLTRSFLESILNQKKLITISDPACGSGGLLIEAYQVIKEELQIDDASDRVLFHAVDVSRNAFNMCVIQLGLLGVMADIYHGNTLTLETFEHRDTPALALWRHQCRTDPALRMLLFLRQLEQETCANRLIEQPNDGDAIAEEAVAASKLEASEADVTFTPQQLKLFE

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Crispr_ID: NZ_AP014644_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014644_2

446497-449667

TypeIII

Consensus_repeat	Method
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	PILER-CR
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CRISPRCasFinder
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CRT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	PILER-CR
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	PILER-CR

41 spacers

csx1,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL,csx18,cas1,cas2

The CRISPR arrays of NZ_AP014644_2

>merge|NZ_AP014644|2|446497-449667|PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTCGAGAACGTAACGAGAAGCAACGGACATAGAGCCAGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCTACGATCCGGCTGACTACTAACCCCAACGCGCAGCAAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTTCTCAGTTTACGATTGTGGCGTGATTGTGGCGTGATCGGGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCTGAACCATTTGTAACTTACTCAGCTACTTTTTAATTCTTATTTTAAGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCTCTTCCCTGTCTTCCGTTCCGCTGCAACGTCTCGATGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTCACCAGAGAATGCCATCTGCATTAGTGCACCCCCCATATTCTAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTGTAAAGCTCTTTCATAGCTTCAAATCCTTTACTGAAGGTCGGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACATGAAGCGCTTAGTGCCTTTGCTTTGAAACTTCAAGAATGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACATTTTACGCCCTTCAGAAAGAATCATTTTTGACTCAATAACTTGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCGCGGATGTTCCCCGTCTTTGAGGGCATTCCGGTGGTCATGGAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACGTTGGTTTGTAGCGATTTGGCAATTGATACATCGCTCTCGATGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCTTGCCATAACTGACAGACAAGGTGTCAGGGGATTTGCGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACGCTGTTTTTCTCGACCTGGAATTAGAAGCCTAGCTGGAAAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCATCAACTGCGGTGTCAGATTCTAAACCATAACCATTGTTGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACAGTTCTGTCTATGTTCGTGACCGTTGTTTCTAATCCGCTAGCAAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTTGATGCATTCGTAGGTCGCAGTTCAGTAAGTGGTGATCACTTCGAGCGTGAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTTGGGTAAAGGGAGCTGATCGGGCGTTTGAATCGACTGTAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCCACCCACACGGGGGGACGGGCGCTCCACCTATATGTAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACGGAATGGATCAAAGTTGCCATTTGCATCCAAATAGATAGGATCAAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACACGGTTAGCGTTCTGCTTACCAAAGATTTTCCAAATAGGCATGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTTCAAACTGCTCGTCAAATACCTCATCCCCTGCATGTCCCATCTCTAGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTCATTAATCAGCGAAAGACTTCTTACTTGCGGCGGTGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTCACTTGCAGCCGCTTTGATTTCGGCTAATTCCTGGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTGAAGTTCAAAGCGAGTCCAACTTGTTCGAGTGTTTTGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACACAGTTCAGGCAACGAAGCTTGCGGCGAATTGCGACGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACATCACAAGCTTGTATCCAATAGAAGGTGTACCCGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTTTATGGGTTTTTATCGAATAGATTGGGTGATAAAGGCTTATCTGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCAAATTTGTATCAGCAGCAATACTAATTAGTCTTTCAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACGCCAGCACAGCACACATGTCTTAGCCTCAAACGTGGGGAGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTCCAAGAACAGAACGCAAAATCTAATTGTTTTAGTGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACATGAAAGATGTGCAGATTATGAGTGCCAAGATTGCATCACAAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCCGCGCAAATTGCTCACTGGACACAAACGCAGAGCGAATGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTACTTGTATTGCTCGAAGTTGATCTTCGGTGCCGTGAGTGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTAGATCTGAATCTAAGATCAAGAATCTGAATTAAGATCTGAGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCTAAGAAGGTAGTAGTCAAACGCTCCACCATACGAGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTCTAGAAGTACATTATTGTTAATTACTGGCATTTAATATCTACCTCCAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTGAAATATTAAATAATGGATGCTCTGAAAGTAAAGCTACAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCACGATCATTGCTATTACCAGAGCCAATAAAATTGATGCGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCTGTATCTTTTCTAGCTTGATCTAATTTCTTTGATGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTAGATAAACAGGATTGTGTCTGCATCCTGTTCAATGTTGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACGAATCGAATTGATGTAATTCTGCCTTTCGATGGTCATAAGAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC

>NZ_AP014644|2|1|446497-447610|PILER-CR
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCGAGAACGTAACGAGAAGCAACGGACATAGAGCCAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTACGATCCGGCTGACTACTAACCCCAACGCGCAGCAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTCTCAGTTTACGATTGTGGCGTGATTGTGGCGTGATCGGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTGAACCATTTGTAACTTACTCAGCTACTTTTTAATTCTTATTTTAAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTCTTCCCTGTCTTCCGTTCCGCTGCAACGTCTCGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCACCAGAGAATGCCATCTGCATTAGTGCACCCCCCATATTCTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGTAAAGCTCTTTCATAGCTTCAAATCCTTTACTGAAGGTCGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATGAAGCGCTTAGTGCCTTTGCTTTGAAACTTCAAGAATG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATTTTACGCCCTTCAGAAAGAATCATTTTTGACTCAATAACTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CGCGGATGTTCCCCGTCTTTGAGGGCATTCCGGTGGTCATGGA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GTTGGTTTGTAGCGATTTGGCAATTGATACATCGCTCTCGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTTGCCATAACTGACAGACAAGGTGTCAGGGGATTTGC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GCTGTTTTTCTCGACCTGGAATTAGAAGCCTAGCTGGAAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CATCAACTGCGGTGTCAGATTCTAAACCATAACCATTGTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACAGTTCTGTCTATGTTCGTGACCGTTGTTTCTAATCCGCTAGCAAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTTGATGCATTCGTAGGTCGCAGTTCAGTAAGTGGTGATCACTTCGAGCGTGAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTGGGTAAAGGGAGCTGATCGGGCGTTTGAATCGACTGTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CCACCCACACGGGGGGACGGGCGCTCCACCTATATGTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GGAATGGATCAAAGTTGCCATTTGCATCCAAATAGATAGGATCAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ACGGTTAGCGTTCTGCTTACCAAAGATTTTCCAAATAGGCAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTCAAACTGCTCGTCAAATACCTCATCCCCTGCATGTCCCATCTCTAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCATTAATCAGCGAAAGACTTCTTACTTGCGGCGGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCACTTGCAGCCGCTTTGATTTCGGCTAATTCCTGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGAAGTTCAAAGCGAGTCCAACTTGTTCGAGTGTTTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ACAGTTCAGGCAACGAAGCTTGCGGCGAATTGCGAC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATCACAAGCTTGTATCCAATAGAAGGTGTACCCG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTTATGGGTTTTTATCGAATAGATTGGGTGATAAAGGCTTATCTG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CAAATTTGTATCAGCAGCAATACTAATTAGTCTTTCA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GCCAGCACAGCACACATGTCTTAGCCTCAAACGTGGGGAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCCAAGAACAGAACGCAAAATCTAATTGTTTTAGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATGAAAGATGTGCAGATTATGAGTGCCAAGATTGCATCACAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CCGCGCAAATTGCTCACTGGACACAAACGCAGAGCGAAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TACTTGTATTGCTCGAAGTTGATCTTCGGTGCCGTGAGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TAGATCTGAATCTAAGATCAAGAATCTGAATTAAGATCTGAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCTAAGAAGGTAGTAGTCAAACGCTCCACCATACGAGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCTAGAAGTACATTATTGTTAATTACTGGCATTTAATATCTACCTCCA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGAAATATTAAATAATGGATGCTCTGAAAGTAAAGCTACA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CACGATCATTGCTATTACCAGAGCCAATAAAATTGATGC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTGTATCTTTTCTAGCTTGATCTAATTTCTTTGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TAGATAAACAGGATTGTGTCTGCATCCTGTTCAATGTTG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GAATCGAATTGATGTAATTCTGCCTTTCGATGGTCATAAGA


>NZ_AP014644|2|2|446497-449667|CRISPRCasFinder
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCGAGAACGTAACGAGAAGCAACGGACATAGAGCCAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTACGATCCGGCTGACTACTAACCCCAACGCGCAGCAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTCTCAGTTTACGATTGTGGCGTGATTGTGGCGTGATCGGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTGAACCATTTGTAACTTACTCAGCTACTTTTTAATTCTTATTTTAAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTCTTCCCTGTCTTCCGTTCCGCTGCAACGTCTCGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCACCAGAGAATGCCATCTGCATTAGTGCACCCCCCATATTCTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGTAAAGCTCTTTCATAGCTTCAAATCCTTTACTGAAGGTCGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATGAAGCGCTTAGTGCCTTTGCTTTGAAACTTCAAGAATG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATTTTACGCCCTTCAGAAAGAATCATTTTTGACTCAATAACTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CGCGGATGTTCCCCGTCTTTGAGGGCATTCCGGTGGTCATGGA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GTTGGTTTGTAGCGATTTGGCAATTGATACATCGCTCTCGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTTGCCATAACTGACAGACAAGGTGTCAGGGGATTTGC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GCTGTTTTTCTCGACCTGGAATTAGAAGCCTAGCTGGAAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CATCAACTGCGGTGTCAGATTCTAAACCATAACCATTGTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	AGTTCTGTCTATGTTCGTGACCGTTGTTTCTAATCCGCTAGCAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTGATGCATTCGTAGGTCGCAGTTCAGTAAGTGGTGATCACTTCGAGCGTGA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTGGGTAAAGGGAGCTGATCGGGCGTTTGAATCGACTGTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CCACCCACACGGGGGGACGGGCGCTCCACCTATATGTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GGAATGGATCAAAGTTGCCATTTGCATCCAAATAGATAGGATCAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ACGGTTAGCGTTCTGCTTACCAAAGATTTTCCAAATAGGCAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTCAAACTGCTCGTCAAATACCTCATCCCCTGCATGTCCCATCTCTAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCATTAATCAGCGAAAGACTTCTTACTTGCGGCGGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCACTTGCAGCCGCTTTGATTTCGGCTAATTCCTGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGAAGTTCAAAGCGAGTCCAACTTGTTCGAGTGTTTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ACAGTTCAGGCAACGAAGCTTGCGGCGAATTGCGAC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATCACAAGCTTGTATCCAATAGAAGGTGTACCCG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTTATGGGTTTTTATCGAATAGATTGGGTGATAAAGGCTTATCTG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CAAATTTGTATCAGCAGCAATACTAATTAGTCTTTCA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GCCAGCACAGCACACATGTCTTAGCCTCAAACGTGGGGAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCCAAGAACAGAACGCAAAATCTAATTGTTTTAGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATGAAAGATGTGCAGATTATGAGTGCCAAGATTGCATCACAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CCGCGCAAATTGCTCACTGGACACAAACGCAGAGCGAAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TACTTGTATTGCTCGAAGTTGATCTTCGGTGCCGTGAGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TAGATCTGAATCTAAGATCAAGAATCTGAATTAAGATCTGAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTAAGAAGGTAGTAGTCAAACGCTCCACCATACGAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCTAGAAGTACATTATTGTTAATTACTGGCATTTAATATCTACCTCCA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGAAATATTAAATAATGGATGCTCTGAAAGTAAAGCTACA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CACGATCATTGCTATTACCAGAGCCAATAAAATTGATGC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTGTATCTTTTCTAGCTTGATCTAATTTCTTTGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TAGATAAACAGGATTGTGTCTGCATCCTGTTCAATGTTG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GAATCGAATTGATGTAATTCTGCCTTTCGATGGTCATAAGA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC

>NZ_AP014644|2|1|446497-449667|CRT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCGAGAACGTAACGAGAAGCAACGGACATAGAGCCAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTACGATCCGGCTGACTACTAACCCCAACGCGCAGCAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTCTCAGTTTACGATTGTGGCGTGATTGTGGCGTGATCGGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTGAACCATTTGTAACTTACTCAGCTACTTTTTAATTCTTATTTTAAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTCTTCCCTGTCTTCCGTTCCGCTGCAACGTCTCGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCACCAGAGAATGCCATCTGCATTAGTGCACCCCCCATATTCTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGTAAAGCTCTTTCATAGCTTCAAATCCTTTACTGAAGGTCGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATGAAGCGCTTAGTGCCTTTGCTTTGAAACTTCAAGAATG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATTTTACGCCCTTCAGAAAGAATCATTTTTGACTCAATAACTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CGCGGATGTTCCCCGTCTTTGAGGGCATTCCGGTGGTCATGGA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GTTGGTTTGTAGCGATTTGGCAATTGATACATCGCTCTCGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTTGCCATAACTGACAGACAAGGTGTCAGGGGATTTGC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GCTGTTTTTCTCGACCTGGAATTAGAAGCCTAGCTGGAAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CATCAACTGCGGTGTCAGATTCTAAACCATAACCATTGTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	AGTTCTGTCTATGTTCGTGACCGTTGTTTCTAATCCGCTAGCAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTGATGCATTCGTAGGTCGCAGTTCAGTAAGTGGTGATCACTTCGAGCGTGA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTGGGTAAAGGGAGCTGATCGGGCGTTTGAATCGACTGTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CCACCCACACGGGGGGACGGGCGCTCCACCTATATGTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GGAATGGATCAAAGTTGCCATTTGCATCCAAATAGATAGGATCAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ACGGTTAGCGTTCTGCTTACCAAAGATTTTCCAAATAGGCAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTCAAACTGCTCGTCAAATACCTCATCCCCTGCATGTCCCATCTCTAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCATTAATCAGCGAAAGACTTCTTACTTGCGGCGGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCACTTGCAGCCGCTTTGATTTCGGCTAATTCCTGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGAAGTTCAAAGCGAGTCCAACTTGTTCGAGTGTTTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ACAGTTCAGGCAACGAAGCTTGCGGCGAATTGCGAC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATCACAAGCTTGTATCCAATAGAAGGTGTACCCG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTTATGGGTTTTTATCGAATAGATTGGGTGATAAAGGCTTATCTG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CAAATTTGTATCAGCAGCAATACTAATTAGTCTTTCA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GCCAGCACAGCACACATGTCTTAGCCTCAAACGTGGGGAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCCAAGAACAGAACGCAAAATCTAATTGTTTTAGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATGAAAGATGTGCAGATTATGAGTGCCAAGATTGCATCACAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CCGCGCAAATTGCTCACTGGACACAAACGCAGAGCGAAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TACTTGTATTGCTCGAAGTTGATCTTCGGTGCCGTGAGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TAGATCTGAATCTAAGATCAAGAATCTGAATTAAGATCTGAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTAAGAAGGTAGTAGTCAAACGCTCCACCATACGAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCTAGAAGTACATTATTGTTAATTACTGGCATTTAATATCTACCTCCA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGAAATATTAAATAATGGATGCTCTGAAAGTAAAGCTACA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CACGATCATTGCTATTACCAGAGCCAATAAAATTGATGC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTGTATCTTTTCTAGCTTGATCTAATTTCTTTGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TAGATAAACAGGATTGTGTCTGCATCCTGTTCAATGTTG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GAATCGAATTGATGTAATTCTGCCTTTCGATGGTCATAAGA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC

>NZ_AP014644|2|2|447743-449137|PILER-CR
	TCGAGAACGTAACGAGAAGCAACGGACATAGAGCCAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTACGATCCGGCTGACTACTAACCCCAACGCGCAGCAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTCTCAGTTTACGATTGTGGCGTGATTGTGGCGTGATCGGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTGAACCATTTGTAACTTACTCAGCTACTTTTTAATTCTTATTTTAAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTCTTCCCTGTCTTCCGTTCCGCTGCAACGTCTCGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCACCAGAGAATGCCATCTGCATTAGTGCACCCCCCATATTCTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGTAAAGCTCTTTCATAGCTTCAAATCCTTTACTGAAGGTCGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATGAAGCGCTTAGTGCCTTTGCTTTGAAACTTCAAGAATG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATTTTACGCCCTTCAGAAAGAATCATTTTTGACTCAATAACTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CGCGGATGTTCCCCGTCTTTGAGGGCATTCCGGTGGTCATGGA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GTTGGTTTGTAGCGATTTGGCAATTGATACATCGCTCTCGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTTGCCATAACTGACAGACAAGGTGTCAGGGGATTTGC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GCTGTTTTTCTCGACCTGGAATTAGAAGCCTAGCTGGAAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CATCAACTGCGGTGTCAGATTCTAAACCATAACCATTGTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACAGTTCTGTCTATGTTCGTGACCGTTGTTTCTAATCCGCTAGCAAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTTGATGCATTCGTAGGTCGCAGTTCAGTAAGTGGTGATCACTTCGAGCGTGAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTGGGTAAAGGGAGCTGATCGGGCGTTTGAATCGACTGTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CCACCCACACGGGGGGACGGGCGCTCCACCTATATGTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GGAATGGATCAAAGTTGCCATTTGCATCCAAATAGATAGGATCAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ACGGTTAGCGTTCTGCTTACCAAAGATTTTCCAAATAGGCAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTCAAACTGCTCGTCAAATACCTCATCCCCTGCATGTCCCATCTCTAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCATTAATCAGCGAAAGACTTCTTACTTGCGGCGGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCACTTGCAGCCGCTTTGATTTCGGCTAATTCCTGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGAAGTTCAAAGCGAGTCCAACTTGTTCGAGTGTTTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ACAGTTCAGGCAACGAAGCTTGCGGCGAATTGCGAC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATCACAAGCTTGTATCCAATAGAAGGTGTACCCG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTTATGGGTTTTTATCGAATAGATTGGGTGATAAAGGCTTATCTG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CAAATTTGTATCAGCAGCAATACTAATTAGTCTTTCA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GCCAGCACAGCACACATGTCTTAGCCTCAAACGTGGGGAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCCAAGAACAGAACGCAAAATCTAATTGTTTTAGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATGAAAGATGTGCAGATTATGAGTGCCAAGATTGCATCACAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CCGCGCAAATTGCTCACTGGACACAAACGCAGAGCGAAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TACTTGTATTGCTCGAAGTTGATCTTCGGTGCCGTGAGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TAGATCTGAATCTAAGATCAAGAATCTGAATTAAGATCTGAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCTAAGAAGGTAGTAGTCAAACGCTCCACCATACGAGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCTAGAAGTACATTATTGTTAATTACTGGCATTTAATATCTACCTCCA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGAAATATTAAATAATGGATGCTCTGAAAGTAAAGCTACA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CACGATCATTGCTATTACCAGAGCCAATAAAATTGATGC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTGTATCTTTTCTAGCTTGATCTAATTTCTTTGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TAGATAAACAGGATTGTGTCTGCATCCTGTTCAATGTTG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GAATCGAATTGATGTAATTCTGCCTTTCGATGGTCATAAGA


>NZ_AP014644|2|3|449174-449667|PILER-CR
	TCGAGAACGTAACGAGAAGCAACGGACATAGAGCCAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTACGATCCGGCTGACTACTAACCCCAACGCGCAGCAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTCTCAGTTTACGATTGTGGCGTGATTGTGGCGTGATCGGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTGAACCATTTGTAACTTACTCAGCTACTTTTTAATTCTTATTTTAAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTCTTCCCTGTCTTCCGTTCCGCTGCAACGTCTCGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCACCAGAGAATGCCATCTGCATTAGTGCACCCCCCATATTCTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGTAAAGCTCTTTCATAGCTTCAAATCCTTTACTGAAGGTCGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATGAAGCGCTTAGTGCCTTTGCTTTGAAACTTCAAGAATG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATTTTACGCCCTTCAGAAAGAATCATTTTTGACTCAATAACTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CGCGGATGTTCCCCGTCTTTGAGGGCATTCCGGTGGTCATGGA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GTTGGTTTGTAGCGATTTGGCAATTGATACATCGCTCTCGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTTGCCATAACTGACAGACAAGGTGTCAGGGGATTTGC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GCTGTTTTTCTCGACCTGGAATTAGAAGCCTAGCTGGAAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CATCAACTGCGGTGTCAGATTCTAAACCATAACCATTGTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACAGTTCTGTCTATGTTCGTGACCGTTGTTTCTAATCCGCTAGCAAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACTTGATGCATTCGTAGGTCGCAGTTCAGTAAGTGGTGATCACTTCGAGCGTGAGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTGGGTAAAGGGAGCTGATCGGGCGTTTGAATCGACTGTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CCACCCACACGGGGGGACGGGCGCTCCACCTATATGTA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GGAATGGATCAAAGTTGCCATTTGCATCCAAATAGATAGGATCAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ACGGTTAGCGTTCTGCTTACCAAAGATTTTCCAAATAGGCAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTCAAACTGCTCGTCAAATACCTCATCCCCTGCATGTCCCATCTCTAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCATTAATCAGCGAAAGACTTCTTACTTGCGGCGGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCACTTGCAGCCGCTTTGATTTCGGCTAATTCCTGG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGAAGTTCAAAGCGAGTCCAACTTGTTCGAGTGTTTT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ACAGTTCAGGCAACGAAGCTTGCGGCGAATTGCGAC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATCACAAGCTTGTATCCAATAGAAGGTGTACCCG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TTTATGGGTTTTTATCGAATAGATTGGGTGATAAAGGCTTATCTG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CAAATTTGTATCAGCAGCAATACTAATTAGTCTTTCA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GCCAGCACAGCACACATGTCTTAGCCTCAAACGTGGGGAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCCAAGAACAGAACGCAAAATCTAATTGTTTTAGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	ATGAAAGATGTGCAGATTATGAGTGCCAAGATTGCATCACAA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CCGCGCAAATTGCTCACTGGACACAAACGCAGAGCGAAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TACTTGTATTGCTCGAAGTTGATCTTCGGTGCCGTGAGT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TAGATCTGAATCTAAGATCAAGAATCTGAATTAAGATCTGAG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAACCTAAGAAGGTAGTAGTCAAACGCTCCACCATACGAGGTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TCTAGAAGTACATTATTGTTAATTACTGGCATTTAATATCTACCTCCA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TGAAATATTAAATAATGGATGCTCTGAAAGTAAAGCTACA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CACGATCATTGCTATTACCAGAGCCAATAAAATTGATGC
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	CTGTATCTTTTCTAGCTTGATCTAATTTCTTTGAT
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	TAGATAAACAGGATTGTGTCTGCATCCTGTTCAATGTTG
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC	GAATCGAATTGATGTAATTCTGCCTTTCGATGGTCATAAGA
GTCTCTTTTAATAGAGGCAATTAATTGAATGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014644.1\|WP_017291555.1\|437786_438926_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_AP014644.1\|WP_148664761.1\|457179_457884_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291549.1\|444767_446219_+\|hypothetical-protein	csx1	mkCas0108_csx1_CAS-III	unknown
NZ_AP014644.1\|WP_017291547.1\|450324_451302_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_AP014644.1\|WP_172410519.1\|436551_437544_-\|DUF91-domain-containing-protein	unknown	unknown	gnl\|CDD\|224552
NZ_AP014644.1\|WP_017291552.1\|441776_442643_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|224255
NZ_AP014644.1\|WP_017291551.1\|442639_443068_+\|hypothetical-protein	cmr5gr11	mkCas0065_cmr5gr11_CAS-III-B	gnl\|CDD\|226481
NZ_AP014644.1\|WP_017291550.1\|443057_444755_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187792
NZ_AP014644.1\|WP_017291558.1\|435063_436218_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379160
NZ_AP014644.1\|WP_144056439.1\|455787_456294_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291554.1\|439150_440779_+\|hypothetical-protein	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_AP014644.1\|WP_017291548.1\|450051_450312_+\|hypothetical-protein	csx18	cls000006_csx18_CAS-I:CAS-III	unknown
NZ_AP014644.1\|WP_017291553.1\|440763_441777_+\|hypothetical-protein	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|370625
NZ_AP014644.1\|WP_017291543.1\|455315_455621_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291546.1\|451318_451597_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP014644.1\|WP_017291545.1\|454127_454292_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291541.1\|456608_456992_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369567
NZ_AP014644.1\|WP_144056411.1\|458085_458871_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291557.1\|436259_436505_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_026149057.1\|454543_455164_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP014644.1\|WP_017291555.1\|437786_438926_-\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	7.35761e-12
NZ_AP014644.1\|WP_017291554.1\|439150_440779_+\|hypothetical-protein	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	1.40997e-18
NZ_AP014644.1\|WP_017291547.1\|450324_451302_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	8.84738e-107
NZ_AP014644.1\|WP_172410519.1\|436551_437544_-\|DUF91-domain-containing-protein	gnl\|CDD\|224552	COG1637, COG1637, Predicted nuclease of the RecB family [DNA replication, recombination, and repair].	1.21179e-05
NZ_AP014644.1\|WP_017291552.1\|441776_442643_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|224255	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	9.05506e-24
NZ_AP014644.1\|WP_017291553.1\|440763_441777_+\|hypothetical-protein	gnl\|CDD\|370625	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3). CRISPR is a term for Clustered Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This highly divergent family, found in at least ten different archaeal and bacterial species, is represented by TM1793 from Thermotoga maritima.	1.11684e-08
NZ_AP014644.1\|WP_017291551.1\|442639_443068_+\|hypothetical-protein	gnl\|CDD\|226481	COG3972, COG3972, Superfamily I DNA and RNA helicases [General function prediction only].	0.000941883
NZ_AP014644.1\|WP_017291546.1\|451318_451597_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.86841e-31
NZ_AP014644.1\|WP_017291550.1\|443057_444755_+\|hypothetical-protein	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	0.000752216
NZ_AP014644.1\|WP_017291541.1\|456608_456992_-\|hypothetical-protein	gnl\|CDD\|369567	pfam07878, RHH_5, CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5. This family contains bacterial proteins that form a ribbon-helix-helix fold. This fold occurs in many examples of bacterial antitoxins.	5.91815e-09
NZ_AP014644.1\|WP_017291558.1\|435063_436218_-\|hypothetical-protein	gnl\|CDD\|379160	pfam13395, HNH_4, HNH endonuclease. This HNH nuclease domain is found in CRISPR-related proteins.	0.00132821

>NZ_AP014644.1|WP_017291549.1|444767_446219_+|hypothetical-protein
MKIWLVTIGSSDVQLRTNDDWGDWYRVIRKDCHNLPFEPAQVIRDSAEPYRIAPRVLGIAYQAYPDEIWNALEFPLLKEFSIKLKDEAIDQIILLTTDQSYIFDENQRDDYKCPYWQDTSELQPILERYFQQHFPAVEVVLKVLAPQKGEFGLDDWNFVLDLVRSTLKELSGEPTAVYISHQAGTPAISSAVQFCSLARFRANVEFVVSNEYCPEQTRMISRSTYLRGLQTQEAKALLERYDYSGVKALLAPYLQAEVANLLEAAIQWNYAKFDRFAEHLQQAADIELAEFAKSRTTLENWWWTAYESAYLGFVRLKQGNTVEAMFHSFRSVEGLLRQWSNVLYGDEIKQTKHPRSEENQRWDRNLNAYGEDLYWFLTVKKSVDVTKNLKQNTTPDIFIFGNLVFKKRNDLFHQLKGLEGQEKVFENWQSPNEPKWKQDPEGHWKLRVLKCLNFICGENFSSLEEASLLVKVHQKIERAISQL
>NZ_AP014644.1|WP_017291550.1|443057_444755_+|hypothetical-protein
MPDSDYVPLMFQAQVQGRSLIHQVKDLKKEAERLAVRKETLRQQAYDWAEQWQESCDVDTVPNFGNDVRKSKEYIFTWRMVTNSGQDEGVIRPVIGERGWAYFPGSSMKGAFLRACRQLHPDRVNRYCGGSAQEGEVHPGILRFHGGYPKDGAWLKNSMVDIVHPQANWQVSGSKLSHETPKVLISLHQPTFVFGISSTEPVLESEWTEIWKIWEKALERGIGSRVSAGYGQVKTHGESKLISVGLSGQGIASRRLDLEGEFRPNGFKAALRGHTHRLFHGITDHKTVNHLIKQLWGGIGKGESATVGLLGVAFSAPELELDEWVAAGNPNNHVPVYETGDAILNVLVMKDGLRQEQRDELKNFVIRLVKFSMLLGGFGRSWRRSDHRLFLPRYKRQMIGCHWTFTKPSRKLYIPVSDDKLVSITRFLDLFYQKAQEFSWLNEIENRKTPDHSCREAWCKDNVQVWGRIADGEEDSIAIKWLHQDYKRGSSIKQSELTGSMKQIGRLWHRMYPRYLKRGEEWIETQEYIELLTIFPNRSGDKDEIQKTANFLKFLQDFTDFKQLW
>NZ_AP014644.1|WP_017291551.1|442639_443068_+|hypothetical-protein
MSWKMYEIDRCAHDLVLKFRDKKDVLNESHKMRVTTAYGLERFWGEHLRLQRENQDKADYWKETWDELCRILRQAGIQIPNDPVSTENSAAIKTMTDKLWNFDQEQRKIALAILIELCDSLIWWTQRYKKPKQGVGGKTDAR
>NZ_AP014644.1|WP_017291552.1|441776_442643_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MYKKTYGIIETLAPLHVGATAGEESGNLNLIFRDQFTQTGILPGSSIRGRFRSEMRRDQSGDANYWYGSPAETGESDTTSESIVKFEYASLLWLPVFCPGQPIVWVSSPKLLKRYQRIAGNSVDGLKSIKTSAIDRLKYVGSSTLKTLNVEGKKKLFFNFGFLTLDKTEDLSIWFPNGEQLPAVVVGDDEIGMIHDMALYRQSRVRLMDREKRVDKGGFFNTEALPEGTIMVFPIAIRNTATTPWQPFGDGIETSEIYLGGLESIGFGNCQITLKNLNTVAHSQEVAA
>NZ_AP014644.1|WP_017291553.1|440763_441777_+|hypothetical-protein
MFQHLITIAPLGLMYGSAGAFLSPENLVGRSGAKFPPDASTVAGLFFSANHSLKGAIAPHDTLKHNLHIAGPFWAKRDQPEVFYVPVPRHRIIAEEQEDEWRLEKHRWQRDLQKEDIEAFYTWQSIDAWNRETRQIRTNREAAQAPWKYVSFLHPQMKAEERHVLDQDGLFLENAVQMDEDYCLVYLSTHAFPEGWYRFGGEGHMVEINSQSLSPSSIIHQLLQTPIDRACALITPGVWGSHNLSYRYPRHPEFPREGMQMLTDKATPCRYRLGNRTTERGRLSRGRYAVPVGTVYVFKHPLNRCWWDFPDDWFPDKGLMKKLGSGLCLPIQIQGVA
>NZ_AP014644.1|WP_017291554.1|439150_440779_+|hypothetical-protein
MPIYTAISFAPVQGFIEKSRKLRDLFGASLILSYLSQSLANAADQTPELKVISPALIHVQEGMPNRILIQGLFPRNEVEKVLIQAWDKVLQPCREWIETNVPVHDLYHWDAEWLRWKQYTWEIFWGKGDDPSAAMNDLERRKLKRDWVGINWTGESSSLTGTDAIAWHRLGEVRDPKHLLSEAEKRELKEFYRQLAWVLDDPHQRCGKIVDAGVEPEGKFIAANERLSLPELIKRLVTLPKLAKKIGLEDLAEGFKDIYREPGYWTGWFMGDGDQIGNKLKDIVQRYGDEKLEVFSHKMRSWGQTFQDDSTQFPQGKGRVIYAGGDDFLGVIYSEQNQSGEPAPEQVKPIDALNWLMQLPDQWQTLKTELWHDLEIEHTYSVGFVWAGHSVPQRDILQHCREAEKQAKSLGRDRVTIRIVFNNGQFIQWTCPWSYLSILTKYQDREGRTWGDAKLNWTHLYSDWEQLKARHAIRLTETDQYHADSYLALQLFNFYFDDAGKAIQKNPQDKRWKYLVGSNSELAIVQWIDSLIQIGWQLCSNI
>NZ_AP014644.1|WP_017291555.1|437786_438926_-|WYL-domain-containing-protein
MKLHPYSESDTFIRLMLLIATFVHHPGVGATPAIGANGTHDAMQLVLAQMQHVAHTLGFALPDYSVHTLRKDLKTLRQYGILDQRMYRWGYYLGTGALTQSELSIALQALAAQAQGDAALKQTYETLERRLRGLNLELEGQLLYPVRTQLQRSIIYTDPVEMMQQGHYRQTLFDHIERLQSAILQGLPIELCQRSNPYVPEETGQRLRVYGLQLVYADIAWYLLCEHLDNEHLSIVRLDRLSDHFQILNPQGRGLEQQFQSLQIAHQLLTTGWGLYLGSVEAQQQERLAQLEPIAVLVRFFPPVVDFILEGERRHPTQKVRRGKHGSYVDYHVTLPERSLSEFLHWVNRFMGAAEILAPASLQERHYQSAIALVQRYET
>NZ_AP014644.1|WP_172410519.1|436551_437544_-|DUF91-domain-containing-protein
MEDFVWNNLSALFNLKGLARQYSLHHQVCDILAIDQSGQITIIELKNSIDRYIIQQLTRYFNAVVSQRPFLDQIDYQQPVRLIAIAPSFHAHNLVDQAYHQLSFELYTFAISSCNHGKLYFELRDSGAEQLIRLEIPEPFHPLIDRVEQHNTAQLAIAPAPPKSLANLLNALTQEQQAYVLSIREQLLEFDPAMIEVGKTTRTIYGLRKNKKDIYQTKLCAEIIPVALGVMRPRLRLQLPYLKRTLSRVSSDNSQKLVKGLTWVEVRHRREWDKTTAIQLLFYFGKGCSHHSYSLSLDEYSKVYQQLAGQYCSLQSLEDVMIVALEEWKA
>NZ_AP014644.1|WP_017291557.1|436259_436505_-|hypothetical-protein
MKPEQIVKAFGVAKSWDECRGLQIPSFFKKPRLSPYQPHQGTHFIQKYRVLVASIKLAQAYQVEQSQIIHTLDKLDAFILS
>NZ_AP014644.1|WP_017291558.1|435063_436218_-|hypothetical-protein
MSLIPAGSVISTILKHDSKQTSYKIALLRAINDIVLMFPDLRNSNQAVAIPLRMLAERWVAYYWPFVQRDCSIWQGPRSFRDGVLRSDLSFRASLTILREQWEHLNRGLGKPSDGFFIVNELRVPRKRQTYPVSLLEAYDITISAIRRTIEQPIRYAGAGEWSVFDRPTRLDRLEATVVAVPSSRPHERCVVVSAELWQTFQSMSLWVEALCIHEWCLFSETVDEQAERGHIYSLLTDRPDNRRPLTWERNKIDLLILEGHTFICPWTHREITPGVAYDLDHLMPVSIYPINELWNLVPADPKFNSHVKRDRLPTIERLQQAQPYFELAYSQYSASESLSDVLREDAEIRFSQLQQDLFAASLAHAVADFIEQVAETRNLSRFG
>NZ_AP014644.1|WP_017291548.1|450051_450312_+|hypothetical-protein
MYLSNRALQVRNASIAGISGALTLVILLIAPLGLAAVIINTLLVTIATFATGTVVDRVVISMQRDRNLPPTADLRRRESSNVDRYR
>NZ_AP014644.1|WP_017291547.1|450324_451302_+|CRISPR-associated-endonuclease-Cas1
MKTLYVSHQGCYLSLRQESVLIKRGETILDQVQLPLLEQILIFGQSQVTTQVIRACLQRNIAIAYLSRMGKCYGRVLSITQGYRQLSRYQQLLSPELQLQTARIIVQAKLKNSRVILMRQQRRRASEQTALAIESLAYLVQQAGEAVSIARLMGLEGAGAASYFSAFGECLSGAGFVFLARSRRPPGNPVNAMLSFGYQVLWNHLLTLIELQGLDPYWGCLHQGHDRHAALASDLIEEFRSSIVDSLVLYLVNRGLVSADDDFEYHDGGCYLNQSGRRKFLQAFVQRMEESVEEQPRWNLLSQQVRAYKQFVYDPSCLYSPYLIR
>NZ_AP014644.1|WP_017291546.1|451318_451597_+|CRISPR-associated-endonuclease-Cas2
MLIYVVTYDIPSDKRRKKIADLLEGYGQRVQYSVFECALSAVKFKELRKRLQQRIKIEEDSVRMYPISQQMLQQVEVWGGVEIVEPPGSTIV
>NZ_AP014644.1|WP_017291545.1|454127_454292_-|hypothetical-protein
MIPDGFSRRFDWTKASGLVVAATVMEGVHQTLQVEGGWLLADLMMQQYSGMRSN
>NZ_AP014644.1|WP_026149057.1|454543_455164_-|hypothetical-protein
MATLGITKAITNLSEAHSRLGVSPSLDALTFFTEWKGTLPALTDTERARLDHLKQRYLYYADSGAITEGTVNLILLSPLLETLNFIDPPYQVRSEKYVRFEIEDGDTQLDGLIDALILQDRLWLILIESKRYGFSVRQALPQTLAYMVSAPTSPVFALITTGEDYLFVKFDRDSSRYALSDKLTLSTVEGNELHVVAQILKRLINS
>NZ_AP014644.1|WP_017291543.1|455315_455621_-|hypothetical-protein
MSSDSGSIEGNKTPRIDDFGVTVEEYLEGLAKGIDILEVRSLERWGIPSELVMELIEINKRVSNGTAKPEEVVRGLQIMSPPIRRQRINEQDAELIESDSP
>NZ_AP014644.1|WP_144056439.1|455787_456294_-|hypothetical-protein
MLRQQYEQTGNLLDILKNPAVMEEIIRLESEYGEIGAGFPAYSKNPQPVTPNQANAVMRKVRLQSMVLIDLAELIQSVNLGVGTEAAITEGRRRIREHLAHLTDEQQAYFDALVDEDQLQLLDKPLRARLKSVVHLLLSDSDWNAIGQAATNALQNQWNEFIRNSKTA
>NZ_AP014644.1|WP_017291541.1|456608_456992_-|hypothetical-protein
MSKRVFLTLPDGIADDLERWAASEKNKAATLAGFLVEEAVRRAKEQGKIPPDDGSFPHYDTLAELVRHNRNKLAESEKFSSARLKALSSGDKPTEVEILRLALILGRTEEYVLSLKTNPDVSEGSTN
>NZ_AP014644.1|WP_148664761.1|457179_457884_+|hypothetical-protein
MNDPLFNSVGDIAMITTKAFKEQHDLSDSAFKRLVRKAKRQYPGGEFTRRINSTQWEVLHPAILESLISTTVAEPEFTDSTMTANKSASHLLQPLNLVPLHSLVPSHSQTVEVIPTSKVSTIADLNGQRDRLMQGQSEIEMALEVVQQTRQLVGYVLSVQRSQTTVDTQQVTQLEDAAFELQVHADCLRREDRRTSIEQGYRDQRRSEAQTQVVQMRDFFARRTEATASSEVQP
>NZ_AP014644.1|WP_144056411.1|458085_458871_+|hypothetical-protein
MPIRGKSKTAQDPNSALKSKSKKAKAETPSATEPTKTPKPTTAPTGILPTIALPLPNIPFRTTPPMTLSGGSSTAIHRKDLTQVNHGLDIPEFQPNQWMAKDLFTNSSPLPETSQAEADQAVLSIARKRQTLRIVRENIGLNRDIVGAATEHQQLLGAVIQYSTELVNNQTKFVKYTDAGVKQQIAAVKLSQSQEQFTQETIALDGLRQMTPLIQEEWNERLELRRAKINGLREQTLNANARLASKRQELEAMFNVEFQTI

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Crispr_ID: NZ_AP014644_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014644_3

451789-453313

TypeIII

Consensus_repeat	Method
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	PILER-CR
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CRISPRCasFinder
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CRT

19 spacers

cas2,cas1,csx18,csx1,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL

The CRISPR arrays of NZ_AP014644_3

>merge|NZ_AP014644|3|451789-453313|PILER-CR,CRISPRCasFinder,CRT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAACAAGAGTCGCTTCTTTAGTAAAGAAAGCATTAAGCTCAGCTTCGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACGAGCATACTTTACCAGCCCATTGAATTCCTTCTACAGTGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACAAGGTTTGGATTTGCATTATCGTGATAATGCTTATTAGCTTGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACCATTTCTTCTAAAGTAGAAGGAACAGGTTCGAAGGGTTGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACATAAGATCACCCACAAAAGAAAGCTGATATTTATTACCTAAGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACCCGGGATTAATCCCAGCCAAACAACTCCAATTTCACTGGCTGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACGTCAGGGTTGATACCATACGCACCAAGATATTCTCTCCACGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACATAATTTGGGGGGTAAGCTGCGCCAGCAGCAACATACGGTGGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACTCACTTGTATTCCTGTTGAGAAATATAAGGAAGCTGCTCAAAATGTGAGGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACACACGATCGCCCCTCTTCTCTGTCAATCCCTCATAATACGCGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACTTTCCACCTCTTTACGAGAGGAGCCAATCAAAGCTTCGATTTCTGAGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACTTGCTGTATACATGGATCTCTAGCGTTTTTCTTGTGGTACGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACGCACAGACACTTACCTCCGGGGACAATCCCGTAGTGATCGCAGTGGGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACTTTAACTGGTTACGCATGAGCGTAAGATGTTGGATGTCTTCCGGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACCTTCAATCAACATCCGGGTGGCTTCTAATCGTTGCTCAAGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACTTGAATAATTTGCTGAATAAACTGAGATTTTTGATGAGCTGTCCAATTGCAAGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACCCCTACCCAAACAAGTCATCAAGTCCGCCAAGATTTCTGTTGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACCATCGATCGTGCGTCGAATCGTCGGATGATTACGAAATTGTCTCCATTGATGGGGGCAAACAATTGAATGGAAACACTCGACCATAATTCTTGAAGCAACTTTCCTAGCCTCTTGACTCAGGTCTCCATTGATGGGGGCAAACAATTGAATGAAAGCT

>NZ_AP014644|3|4|451789-453230|PILER-CR
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	AAGAGTCGCTTCTTTAGTAAAGAAAGCATTAAGCTCAGCTTC
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	GAGCATACTTTACCAGCCCATTGAATTCCTTCTACAGT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	AAGGTTTGGATTTGCATTATCGTGATAATGCTTATTAGCTT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CATTTCTTCTAAAGTAGAAGGAACAGGTTCGAAGGGTT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	ATAAGATCACCCACAAAAGAAAGCTGATATTTATTACCTAA
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CCGGGATTAATCCCAGCCAAACAACTCCAATTTCACTGGCT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	GTCAGGGTTGATACCATACGCACCAAGATATTCTCTCCAC
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	ATAATTTGGGGGGTAAGCTGCGCCAGCAGCAACATACGGTG
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TCACTTGTATTCCTGTTGAGAAATATAAGGAAGCTGCTCAAAATGTGAG
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	ACACGATCGCCCCTCTTCTCTGTCAATCCCTCATAATACGC
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TTTCCACCTCTTTACGAGAGGAGCCAATCAAAGCTTCGATTTCTGA
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TTGCTGTATACATGGATCTCTAGCGTTTTTCTTGTGGTAC
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	GCACAGACACTTACCTCCGGGGACAATCCCGTAGTGATCGCAGTGG
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TTTAACTGGTTACGCATGAGCGTAAGATGTTGGATGTCTTCCG
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CTTCAATCAACATCCGGGTGGCTTCTAATCGTTGCTCAA
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TTGAATAATTTGCTGAATAAACTGAGATTTTTGATGAGCTGTCCAATTGCAA
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CCCTACCCAAACAAGTCATCAAGTCCGCCAAGATTTCTGTT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CATCGATCGTGCGTCGAATCGTCGGATGATTACGAAATT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC

>NZ_AP014644|3|3|451789-453313|CRISPRCasFinder
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	AAGAGTCGCTTCTTTAGTAAAGAAAGCATTAAGCTCAGCTTC
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	GAGCATACTTTACCAGCCCATTGAATTCCTTCTACAGT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	AAGGTTTGGATTTGCATTATCGTGATAATGCTTATTAGCTT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CATTTCTTCTAAAGTAGAAGGAACAGGTTCGAAGGGTT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	ATAAGATCACCCACAAAAGAAAGCTGATATTTATTACCTAA
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CCGGGATTAATCCCAGCCAAACAACTCCAATTTCACTGGCT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	GTCAGGGTTGATACCATACGCACCAAGATATTCTCTCCAC
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	ATAATTTGGGGGGTAAGCTGCGCCAGCAGCAACATACGGTG
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TCACTTGTATTCCTGTTGAGAAATATAAGGAAGCTGCTCAAAATGTGAG
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	ACACGATCGCCCCTCTTCTCTGTCAATCCCTCATAATACGC
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TTTCCACCTCTTTACGAGAGGAGCCAATCAAAGCTTCGATTTCTGA
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TTGCTGTATACATGGATCTCTAGCGTTTTTCTTGTGGTAC
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	GCACAGACACTTACCTCCGGGGACAATCCCGTAGTGATCGCAGTGG
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TTTAACTGGTTACGCATGAGCGTAAGATGTTGGATGTCTTCCG
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CTTCAATCAACATCCGGGTGGCTTCTAATCGTTGCTCAA
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TTGAATAATTTGCTGAATAAACTGAGATTTTTGATGAGCTGTCCAATTGCAA
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CCCTACCCAAACAAGTCATCAAGTCCGCCAAGATTTCTGTT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CATCGATCGTGCGTCGAATCGTCGGATGATTACGAAATT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	ACTCGACCATAATTCTTGAAGCAACTTTCCTAGCCTCTTGACTCAG
GTCTCCATTGATGGGGGCAAACAATTGAATGAAAGCT

>NZ_AP014644|3|2|451789-453312|CRT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	AAGAGTCGCTTCTTTAGTAAAGAAAGCATTAAGCTCAGCTTC
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	GAGCATACTTTACCAGCCCATTGAATTCCTTCTACAGT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	AAGGTTTGGATTTGCATTATCGTGATAATGCTTATTAGCTT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CATTTCTTCTAAAGTAGAAGGAACAGGTTCGAAGGGTT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	ATAAGATCACCCACAAAAGAAAGCTGATATTTATTACCTAA
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CCGGGATTAATCCCAGCCAAACAACTCCAATTTCACTGGCT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	GTCAGGGTTGATACCATACGCACCAAGATATTCTCTCCAC
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	ATAATTTGGGGGGTAAGCTGCGCCAGCAGCAACATACGGTG
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TCACTTGTATTCCTGTTGAGAAATATAAGGAAGCTGCTCAAAATGTGAG
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	ACACGATCGCCCCTCTTCTCTGTCAATCCCTCATAATACGC
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TTTCCACCTCTTTACGAGAGGAGCCAATCAAAGCTTCGATTTCTGA
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TTGCTGTATACATGGATCTCTAGCGTTTTTCTTGTGGTAC
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	GCACAGACACTTACCTCCGGGGACAATCCCGTAGTGATCGCAGTGG
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TTTAACTGGTTACGCATGAGCGTAAGATGTTGGATGTCTTCCG
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CTTCAATCAACATCCGGGTGGCTTCTAATCGTTGCTCAA
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	TTGAATAATTTGCTGAATAAACTGAGATTTTTGATGAGCTGTCCAATTGCAA
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CCCTACCCAAACAAGTCATCAAGTCCGCCAAGATTTCTGTT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CATCGATCGTGCGTCGAATCGTCGGATGATTACGAAATT
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	ACTCGACCATAATTCTTGAAGCAACTTTCCTAGCCTCTTGACTCAG
GTCTCCATTGATGGGGGCAAACAATTGAATGAAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014644.1\|WP_017291555.1\|437786_438926_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_AP014644.1\|WP_148664761.1\|457179_457884_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291538.1\|458932_460447_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178867
NZ_AP014644.1\|WP_017291549.1\|444767_446219_+\|hypothetical-protein	csx1	mkCas0108_csx1_CAS-III	unknown
NZ_AP014644.1\|WP_017291547.1\|450324_451302_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_AP014644.1\|WP_017291552.1\|441776_442643_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|224255
NZ_AP014644.1\|WP_172410481.1\|462220_462895_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|136670
NZ_AP014644.1\|WP_017291551.1\|442639_443068_+\|hypothetical-protein	cmr5gr11	mkCas0065_cmr5gr11_CAS-III-B	gnl\|CDD\|226481
NZ_AP014644.1\|WP_017291553.1\|440763_441777_+\|hypothetical-protein	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|370625
NZ_AP014644.1\|WP_172410480.1\|460596_462327_+\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_AP014644.1\|WP_144056439.1\|455787_456294_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291554.1\|439150_440779_+\|hypothetical-protein	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_AP014644.1\|WP_017291548.1\|450051_450312_+\|hypothetical-protein	csx18	cls000006_csx18_CAS-I:CAS-III	unknown
NZ_AP014644.1\|WP_017291550.1\|443057_444755_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187792
NZ_AP014644.1\|WP_017291543.1\|455315_455621_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291546.1\|451318_451597_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP014644.1\|WP_017291545.1\|454127_454292_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291541.1\|456608_456992_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369567
NZ_AP014644.1\|WP_144056411.1\|458085_458871_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_026149057.1\|454543_455164_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP014644.1\|WP_017291555.1\|437786_438926_-\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	7.35761e-12
NZ_AP014644.1\|WP_017291547.1\|450324_451302_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	8.84738e-107
NZ_AP014644.1\|WP_017291552.1\|441776_442643_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|224255	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	9.05506e-24
NZ_AP014644.1\|WP_172410480.1\|460596_462327_+\|IS21-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	6.80418e-08
NZ_AP014644.1\|WP_017291553.1\|440763_441777_+\|hypothetical-protein	gnl\|CDD\|370625	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3). CRISPR is a term for Clustered Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This highly divergent family, found in at least ten different archaeal and bacterial species, is represented by TM1793 from Thermotoga maritima.	1.11684e-08
NZ_AP014644.1\|WP_017291554.1\|439150_440779_+\|hypothetical-protein	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	1.40997e-18
NZ_AP014644.1\|WP_172410481.1\|462220_462895_+\|ATP-binding-protein	gnl\|CDD\|136670	PRK08181, PRK08181, transposase; Validated.	8.95163e-79
NZ_AP014644.1\|WP_017291550.1\|443057_444755_+\|hypothetical-protein	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	0.000752216
NZ_AP014644.1\|WP_017291541.1\|456608_456992_-\|hypothetical-protein	gnl\|CDD\|369567	pfam07878, RHH_5, CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5. This family contains bacterial proteins that form a ribbon-helix-helix fold. This fold occurs in many examples of bacterial antitoxins.	5.91815e-09
NZ_AP014644.1\|WP_017291546.1\|451318_451597_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.86841e-31
NZ_AP014644.1\|WP_017291538.1\|458932_460447_+\|hypothetical-protein	gnl\|CDD\|178867	PRK00106, PRK00106, ribonuclease Y.	0.000680302
NZ_AP014644.1\|WP_017291551.1\|442639_443068_+\|hypothetical-protein	gnl\|CDD\|226481	COG3972, COG3972, Superfamily I DNA and RNA helicases [General function prediction only].	0.000941883

>NZ_AP014644.1|WP_017291546.1|451318_451597_+|CRISPR-associated-endonuclease-Cas2
MLIYVVTYDIPSDKRRKKIADLLEGYGQRVQYSVFECALSAVKFKELRKRLQQRIKIEEDSVRMYPISQQMLQQVEVWGGVEIVEPPGSTIV
>NZ_AP014644.1|WP_017291547.1|450324_451302_+|CRISPR-associated-endonuclease-Cas1
MKTLYVSHQGCYLSLRQESVLIKRGETILDQVQLPLLEQILIFGQSQVTTQVIRACLQRNIAIAYLSRMGKCYGRVLSITQGYRQLSRYQQLLSPELQLQTARIIVQAKLKNSRVILMRQQRRRASEQTALAIESLAYLVQQAGEAVSIARLMGLEGAGAASYFSAFGECLSGAGFVFLARSRRPPGNPVNAMLSFGYQVLWNHLLTLIELQGLDPYWGCLHQGHDRHAALASDLIEEFRSSIVDSLVLYLVNRGLVSADDDFEYHDGGCYLNQSGRRKFLQAFVQRMEESVEEQPRWNLLSQQVRAYKQFVYDPSCLYSPYLIR
>NZ_AP014644.1|WP_017291548.1|450051_450312_+|hypothetical-protein
MYLSNRALQVRNASIAGISGALTLVILLIAPLGLAAVIINTLLVTIATFATGTVVDRVVISMQRDRNLPPTADLRRRESSNVDRYR
>NZ_AP014644.1|WP_017291549.1|444767_446219_+|hypothetical-protein
MKIWLVTIGSSDVQLRTNDDWGDWYRVIRKDCHNLPFEPAQVIRDSAEPYRIAPRVLGIAYQAYPDEIWNALEFPLLKEFSIKLKDEAIDQIILLTTDQSYIFDENQRDDYKCPYWQDTSELQPILERYFQQHFPAVEVVLKVLAPQKGEFGLDDWNFVLDLVRSTLKELSGEPTAVYISHQAGTPAISSAVQFCSLARFRANVEFVVSNEYCPEQTRMISRSTYLRGLQTQEAKALLERYDYSGVKALLAPYLQAEVANLLEAAIQWNYAKFDRFAEHLQQAADIELAEFAKSRTTLENWWWTAYESAYLGFVRLKQGNTVEAMFHSFRSVEGLLRQWSNVLYGDEIKQTKHPRSEENQRWDRNLNAYGEDLYWFLTVKKSVDVTKNLKQNTTPDIFIFGNLVFKKRNDLFHQLKGLEGQEKVFENWQSPNEPKWKQDPEGHWKLRVLKCLNFICGENFSSLEEASLLVKVHQKIERAISQL
>NZ_AP014644.1|WP_017291550.1|443057_444755_+|hypothetical-protein
MPDSDYVPLMFQAQVQGRSLIHQVKDLKKEAERLAVRKETLRQQAYDWAEQWQESCDVDTVPNFGNDVRKSKEYIFTWRMVTNSGQDEGVIRPVIGERGWAYFPGSSMKGAFLRACRQLHPDRVNRYCGGSAQEGEVHPGILRFHGGYPKDGAWLKNSMVDIVHPQANWQVSGSKLSHETPKVLISLHQPTFVFGISSTEPVLESEWTEIWKIWEKALERGIGSRVSAGYGQVKTHGESKLISVGLSGQGIASRRLDLEGEFRPNGFKAALRGHTHRLFHGITDHKTVNHLIKQLWGGIGKGESATVGLLGVAFSAPELELDEWVAAGNPNNHVPVYETGDAILNVLVMKDGLRQEQRDELKNFVIRLVKFSMLLGGFGRSWRRSDHRLFLPRYKRQMIGCHWTFTKPSRKLYIPVSDDKLVSITRFLDLFYQKAQEFSWLNEIENRKTPDHSCREAWCKDNVQVWGRIADGEEDSIAIKWLHQDYKRGSSIKQSELTGSMKQIGRLWHRMYPRYLKRGEEWIETQEYIELLTIFPNRSGDKDEIQKTANFLKFLQDFTDFKQLW
>NZ_AP014644.1|WP_017291551.1|442639_443068_+|hypothetical-protein
MSWKMYEIDRCAHDLVLKFRDKKDVLNESHKMRVTTAYGLERFWGEHLRLQRENQDKADYWKETWDELCRILRQAGIQIPNDPVSTENSAAIKTMTDKLWNFDQEQRKIALAILIELCDSLIWWTQRYKKPKQGVGGKTDAR
>NZ_AP014644.1|WP_017291552.1|441776_442643_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MYKKTYGIIETLAPLHVGATAGEESGNLNLIFRDQFTQTGILPGSSIRGRFRSEMRRDQSGDANYWYGSPAETGESDTTSESIVKFEYASLLWLPVFCPGQPIVWVSSPKLLKRYQRIAGNSVDGLKSIKTSAIDRLKYVGSSTLKTLNVEGKKKLFFNFGFLTLDKTEDLSIWFPNGEQLPAVVVGDDEIGMIHDMALYRQSRVRLMDREKRVDKGGFFNTEALPEGTIMVFPIAIRNTATTPWQPFGDGIETSEIYLGGLESIGFGNCQITLKNLNTVAHSQEVAA
>NZ_AP014644.1|WP_017291553.1|440763_441777_+|hypothetical-protein
MFQHLITIAPLGLMYGSAGAFLSPENLVGRSGAKFPPDASTVAGLFFSANHSLKGAIAPHDTLKHNLHIAGPFWAKRDQPEVFYVPVPRHRIIAEEQEDEWRLEKHRWQRDLQKEDIEAFYTWQSIDAWNRETRQIRTNREAAQAPWKYVSFLHPQMKAEERHVLDQDGLFLENAVQMDEDYCLVYLSTHAFPEGWYRFGGEGHMVEINSQSLSPSSIIHQLLQTPIDRACALITPGVWGSHNLSYRYPRHPEFPREGMQMLTDKATPCRYRLGNRTTERGRLSRGRYAVPVGTVYVFKHPLNRCWWDFPDDWFPDKGLMKKLGSGLCLPIQIQGVA
>NZ_AP014644.1|WP_017291554.1|439150_440779_+|hypothetical-protein
MPIYTAISFAPVQGFIEKSRKLRDLFGASLILSYLSQSLANAADQTPELKVISPALIHVQEGMPNRILIQGLFPRNEVEKVLIQAWDKVLQPCREWIETNVPVHDLYHWDAEWLRWKQYTWEIFWGKGDDPSAAMNDLERRKLKRDWVGINWTGESSSLTGTDAIAWHRLGEVRDPKHLLSEAEKRELKEFYRQLAWVLDDPHQRCGKIVDAGVEPEGKFIAANERLSLPELIKRLVTLPKLAKKIGLEDLAEGFKDIYREPGYWTGWFMGDGDQIGNKLKDIVQRYGDEKLEVFSHKMRSWGQTFQDDSTQFPQGKGRVIYAGGDDFLGVIYSEQNQSGEPAPEQVKPIDALNWLMQLPDQWQTLKTELWHDLEIEHTYSVGFVWAGHSVPQRDILQHCREAEKQAKSLGRDRVTIRIVFNNGQFIQWTCPWSYLSILTKYQDREGRTWGDAKLNWTHLYSDWEQLKARHAIRLTETDQYHADSYLALQLFNFYFDDAGKAIQKNPQDKRWKYLVGSNSELAIVQWIDSLIQIGWQLCSNI
>NZ_AP014644.1|WP_017291555.1|437786_438926_-|WYL-domain-containing-protein
MKLHPYSESDTFIRLMLLIATFVHHPGVGATPAIGANGTHDAMQLVLAQMQHVAHTLGFALPDYSVHTLRKDLKTLRQYGILDQRMYRWGYYLGTGALTQSELSIALQALAAQAQGDAALKQTYETLERRLRGLNLELEGQLLYPVRTQLQRSIIYTDPVEMMQQGHYRQTLFDHIERLQSAILQGLPIELCQRSNPYVPEETGQRLRVYGLQLVYADIAWYLLCEHLDNEHLSIVRLDRLSDHFQILNPQGRGLEQQFQSLQIAHQLLTTGWGLYLGSVEAQQQERLAQLEPIAVLVRFFPPVVDFILEGERRHPTQKVRRGKHGSYVDYHVTLPERSLSEFLHWVNRFMGAAEILAPASLQERHYQSAIALVQRYET
>NZ_AP014644.1|WP_017291545.1|454127_454292_-|hypothetical-protein
MIPDGFSRRFDWTKASGLVVAATVMEGVHQTLQVEGGWLLADLMMQQYSGMRSN
>NZ_AP014644.1|WP_026149057.1|454543_455164_-|hypothetical-protein
MATLGITKAITNLSEAHSRLGVSPSLDALTFFTEWKGTLPALTDTERARLDHLKQRYLYYADSGAITEGTVNLILLSPLLETLNFIDPPYQVRSEKYVRFEIEDGDTQLDGLIDALILQDRLWLILIESKRYGFSVRQALPQTLAYMVSAPTSPVFALITTGEDYLFVKFDRDSSRYALSDKLTLSTVEGNELHVVAQILKRLINS
>NZ_AP014644.1|WP_017291543.1|455315_455621_-|hypothetical-protein
MSSDSGSIEGNKTPRIDDFGVTVEEYLEGLAKGIDILEVRSLERWGIPSELVMELIEINKRVSNGTAKPEEVVRGLQIMSPPIRRQRINEQDAELIESDSP
>NZ_AP014644.1|WP_144056439.1|455787_456294_-|hypothetical-protein
MLRQQYEQTGNLLDILKNPAVMEEIIRLESEYGEIGAGFPAYSKNPQPVTPNQANAVMRKVRLQSMVLIDLAELIQSVNLGVGTEAAITEGRRRIREHLAHLTDEQQAYFDALVDEDQLQLLDKPLRARLKSVVHLLLSDSDWNAIGQAATNALQNQWNEFIRNSKTA
>NZ_AP014644.1|WP_017291541.1|456608_456992_-|hypothetical-protein
MSKRVFLTLPDGIADDLERWAASEKNKAATLAGFLVEEAVRRAKEQGKIPPDDGSFPHYDTLAELVRHNRNKLAESEKFSSARLKALSSGDKPTEVEILRLALILGRTEEYVLSLKTNPDVSEGSTN
>NZ_AP014644.1|WP_148664761.1|457179_457884_+|hypothetical-protein
MNDPLFNSVGDIAMITTKAFKEQHDLSDSAFKRLVRKAKRQYPGGEFTRRINSTQWEVLHPAILESLISTTVAEPEFTDSTMTANKSASHLLQPLNLVPLHSLVPSHSQTVEVIPTSKVSTIADLNGQRDRLMQGQSEIEMALEVVQQTRQLVGYVLSVQRSQTTVDTQQVTQLEDAAFELQVHADCLRREDRRTSIEQGYRDQRRSEAQTQVVQMRDFFARRTEATASSEVQP
>NZ_AP014644.1|WP_144056411.1|458085_458871_+|hypothetical-protein
MPIRGKSKTAQDPNSALKSKSKKAKAETPSATEPTKTPKPTTAPTGILPTIALPLPNIPFRTTPPMTLSGGSSTAIHRKDLTQVNHGLDIPEFQPNQWMAKDLFTNSSPLPETSQAEADQAVLSIARKRQTLRIVRENIGLNRDIVGAATEHQQLLGAVIQYSTELVNNQTKFVKYTDAGVKQQIAAVKLSQSQEQFTQETIALDGLRQMTPLIQEEWNERLELRRAKINGLREQTLNANARLASKRQELEAMFNVEFQTI
>NZ_AP014644.1|WP_017291538.1|458932_460447_+|hypothetical-protein
MPNTKSNDWIELMSFLGGIVSFILFLAAIAQQSRIAQSLSLLGLATSTGGIVACALSDRTNQTREEVEALTQRLSDRDLTLAAKDDRIVNLTAELNRVMAFVDHLKSAPISVDRTSHIVAQYQEKLNTLQARYRAEVERVKTEARSQHQTELDRLRSEMVAADTRIHEFEQRFLDRAQETLSEALTSFHDRISDLVMDNLRKLSHLEPETRDATFAERLQQLSEEVTDLHQTYVAQILNLSHFLDAENILDCSDEALSILYHLMDDYTSIKVKVINALKAKTIRELQTTIQAYQAADLVPKAQLEQLVKNLKLRLQEYELDAVQHQESVVAIANDYEAQTLEDDRIVRGYIDQLAKLEHDNHQLKEQVASLSALKKFDPGAWGWGADIGNQVIDYLMSENIPCDALPLDFSPTDSHLTIALNCRTEAGLRMLAKDGKEFEKGMAAAKGWSHVSLTLTGRVVKVTVQYANRAIAKTKPEAVLDRPISDWDLYLAAEYHWFIAAAC
>NZ_AP014644.1|WP_172410480.1|460596_462327_+|IS21-family-transposase
MSGKVKIYQVQVYMTAREKGFTQVEAAELAGFSARTGQRIEAGDHQPNRGRIRDWRSTPDPLAEVWESELEPMLKANPGLQPTTLFEWLQERYPGKYPQVLRTVQRRVAAWKALHGEPKEIMFELRHEPGMMGLSDFTELKGIEIRIAGKPFEHLLYHYRLAYSGWQYAQIIQGGESFIALSEGLQNALFACGGVPKQHRTDSLSAAYRNMGGARNKPLTRLYDDLCSHYRMQPTRNNTGIAHENGGIESPHGHLKNRIKQMLLLRGSHDFDSIADYQDLINRAIAKLNDLHPRKIEEEKQYLQPLPKYRVPDYEVLTATVSCRSTIDVRCVLYTVPSRLIGQSLELHLYHDRIIGYLNRHSVVELPRIRVSDKAKRRARCINYRHIAEGLRLKPRAFLYCTWQQELLPNQIWRELWSQLKCRFDLDSAAVLMVEALYIATTQDKEIAVASYLQAQLNANSLTLATLRKQFQLLSDLSLPNLTTTQHNLEHYDQLLHREPAHQSVSESQPPPQTTAPTSHAASLGNTRTTSDAGRLVLRTVLAGSVRIGSPTPMEQPYPTRSERSPTAKRKNGFQL
>NZ_AP014644.1|WP_172410481.1|462220_462895_+|ATP-binding-protein
MLVLCESEVQHRWSNRIQRALREAQLPSGKTVSNFDFSHCPSFNPAPLMQMADDPTWLGRAENLLLFGASGVGKSHLASAVSRRMVEFGKRVRFFSALALVQQLQQAKLQLQLQAMLKKLDRFDLLVLDDLGYVKKTEAETSVLFELIAHRYERKSLLITANQPFSQWDAIFTDSMMTVAAVDRLVHHALIVEIQTESYRKQSAVSRSEASKTAKKETVQPKRS

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Crispr_ID: NZ_AP014644_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014644_4

453718-454116

TypeIII

Consensus_repeat	Method
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	PILER-CR
GTCTCCATTGATGGGGGCAAACAATTGAATGGAAAC	CRISPRCasFinder
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	CRT

5 spacers

cas2,cas1,csx18,csx1,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL

The CRISPR arrays of NZ_AP014644_4

>merge|NZ_AP014644|4|453718-454116|PILER-CR,CRISPRCasFinder,CRT
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAACCTTCCAGTTGCGCCACGGTCGCGATTGCATCAAGTTCTCACTCGTTGGGAACCACAATTGAATGGAAACTCATTGCACCTTTAATAGGCAAGCCAAATGCACTTGTTCTCACTCGTTGGGAACCACAATTGAATGGAAACATACGCCATTTTCCATTAGCAGGGTTATAGGTTCGAGTTCTCACTCGTTGGGAACCACAATTGAATGGAAACGATGTTGATTCCTTCTCCCGAATTAGGGTCGGTAATGGTTCTCACTCGTTGGGAACCACAATTGAATGGAAACCGCAGTGCCCTCAATGATATCCATCAGTGGATCCGCGATATCGTTCTCACTCGTTGGGAACCACAATTGAGTGGAAAA

>NZ_AP014644|4|5|453718-454116|PILER-CR
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	CTTCCAGTTGCGCCACGGTCGCGATTGCATCAA
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	TCATTGCACCTTTAATAGGCAAGCCAAATGCACTT
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	ATACGCCATTTTCCATTAGCAGGGTTATAGGTTCGA
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	GATGTTGATTCCTTCTCCCGAATTAGGGTCGGTAATG
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	CGCAGTGCCCTCAATGATATCCATCAGTGGATCCGCGATATC
GTTCTCACTCGTTGGGAACCACAATTGAGTGGAAAA

>NZ_AP014644|4|4|453718-454038|CRISPRCasFinder
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	CTTCCAGTTGCGCCACGGTCGCGATTGCATCAA
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	TCATTGCACCTTTAATAGGCAAGCCAAATGCACTT
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	ATACGCCATTTTCCATTAGCAGGGTTATAGGTTCGA
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	GATGTTGATTCCTTCTCCCGAATTAGGGTCGGTAATG
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC

>NZ_AP014644|4|3|453718-454116|CRT
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	CTTCCAGTTGCGCCACGGTCGCGATTGCATCAA
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	TCATTGCACCTTTAATAGGCAAGCCAAATGCACTT
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	ATACGCCATTTTCCATTAGCAGGGTTATAGGTTCGA
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	GATGTTGATTCCTTCTCCCGAATTAGGGTCGGTAATG
GTTCTCACTCGTTGGGAACCACAATTGAATGGAAAC	CGCAGTGCCCTCAATGATATCCATCAGTGGATCCGCGATATC
GTTCTCACTCGTTGGGAACCACAATTGAGTGGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014644.1\|WP_017291555.1\|437786_438926_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_AP014644.1\|WP_148664761.1\|457179_457884_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291538.1\|458932_460447_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178867
NZ_AP014644.1\|WP_017291549.1\|444767_446219_+\|hypothetical-protein	csx1	mkCas0108_csx1_CAS-III	unknown
NZ_AP014644.1\|WP_017291547.1\|450324_451302_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_AP014644.1\|WP_017291552.1\|441776_442643_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|224255
NZ_AP014644.1\|WP_172410481.1\|462220_462895_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|136670
NZ_AP014644.1\|WP_017291551.1\|442639_443068_+\|hypothetical-protein	cmr5gr11	mkCas0065_cmr5gr11_CAS-III-B	gnl\|CDD\|226481
NZ_AP014644.1\|WP_017291553.1\|440763_441777_+\|hypothetical-protein	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|370625
NZ_AP014644.1\|WP_172410480.1\|460596_462327_+\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_AP014644.1\|WP_144056439.1\|455787_456294_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291554.1\|439150_440779_+\|hypothetical-protein	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_AP014644.1\|WP_017291548.1\|450051_450312_+\|hypothetical-protein	csx18	cls000006_csx18_CAS-I:CAS-III	unknown
NZ_AP014644.1\|WP_017291550.1\|443057_444755_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187792
NZ_AP014644.1\|WP_017291543.1\|455315_455621_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291546.1\|451318_451597_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP014644.1\|WP_017291545.1\|454127_454292_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_017291541.1\|456608_456992_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369567
NZ_AP014644.1\|WP_144056411.1\|458085_458871_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014644.1\|WP_026149057.1\|454543_455164_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP014644.1\|WP_017291555.1\|437786_438926_-\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	7.35761e-12
NZ_AP014644.1\|WP_017291547.1\|450324_451302_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	8.84738e-107
NZ_AP014644.1\|WP_017291552.1\|441776_442643_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|224255	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	9.05506e-24
NZ_AP014644.1\|WP_172410480.1\|460596_462327_+\|IS21-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	6.80418e-08
NZ_AP014644.1\|WP_017291553.1\|440763_441777_+\|hypothetical-protein	gnl\|CDD\|370625	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3). CRISPR is a term for Clustered Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This highly divergent family, found in at least ten different archaeal and bacterial species, is represented by TM1793 from Thermotoga maritima.	1.11684e-08
NZ_AP014644.1\|WP_017291554.1\|439150_440779_+\|hypothetical-protein	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	1.40997e-18
NZ_AP014644.1\|WP_172410481.1\|462220_462895_+\|ATP-binding-protein	gnl\|CDD\|136670	PRK08181, PRK08181, transposase; Validated.	8.95163e-79
NZ_AP014644.1\|WP_017291550.1\|443057_444755_+\|hypothetical-protein	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	0.000752216
NZ_AP014644.1\|WP_017291541.1\|456608_456992_-\|hypothetical-protein	gnl\|CDD\|369567	pfam07878, RHH_5, CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5. This family contains bacterial proteins that form a ribbon-helix-helix fold. This fold occurs in many examples of bacterial antitoxins.	5.91815e-09
NZ_AP014644.1\|WP_017291546.1\|451318_451597_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.86841e-31
NZ_AP014644.1\|WP_017291538.1\|458932_460447_+\|hypothetical-protein	gnl\|CDD\|178867	PRK00106, PRK00106, ribonuclease Y.	0.000680302
NZ_AP014644.1\|WP_017291551.1\|442639_443068_+\|hypothetical-protein	gnl\|CDD\|226481	COG3972, COG3972, Superfamily I DNA and RNA helicases [General function prediction only].	0.000941883

>NZ_AP014644.1|WP_017291546.1|451318_451597_+|CRISPR-associated-endonuclease-Cas2
MLIYVVTYDIPSDKRRKKIADLLEGYGQRVQYSVFECALSAVKFKELRKRLQQRIKIEEDSVRMYPISQQMLQQVEVWGGVEIVEPPGSTIV
>NZ_AP014644.1|WP_017291547.1|450324_451302_+|CRISPR-associated-endonuclease-Cas1
MKTLYVSHQGCYLSLRQESVLIKRGETILDQVQLPLLEQILIFGQSQVTTQVIRACLQRNIAIAYLSRMGKCYGRVLSITQGYRQLSRYQQLLSPELQLQTARIIVQAKLKNSRVILMRQQRRRASEQTALAIESLAYLVQQAGEAVSIARLMGLEGAGAASYFSAFGECLSGAGFVFLARSRRPPGNPVNAMLSFGYQVLWNHLLTLIELQGLDPYWGCLHQGHDRHAALASDLIEEFRSSIVDSLVLYLVNRGLVSADDDFEYHDGGCYLNQSGRRKFLQAFVQRMEESVEEQPRWNLLSQQVRAYKQFVYDPSCLYSPYLIR
>NZ_AP014644.1|WP_017291548.1|450051_450312_+|hypothetical-protein
MYLSNRALQVRNASIAGISGALTLVILLIAPLGLAAVIINTLLVTIATFATGTVVDRVVISMQRDRNLPPTADLRRRESSNVDRYR
>NZ_AP014644.1|WP_017291549.1|444767_446219_+|hypothetical-protein
MKIWLVTIGSSDVQLRTNDDWGDWYRVIRKDCHNLPFEPAQVIRDSAEPYRIAPRVLGIAYQAYPDEIWNALEFPLLKEFSIKLKDEAIDQIILLTTDQSYIFDENQRDDYKCPYWQDTSELQPILERYFQQHFPAVEVVLKVLAPQKGEFGLDDWNFVLDLVRSTLKELSGEPTAVYISHQAGTPAISSAVQFCSLARFRANVEFVVSNEYCPEQTRMISRSTYLRGLQTQEAKALLERYDYSGVKALLAPYLQAEVANLLEAAIQWNYAKFDRFAEHLQQAADIELAEFAKSRTTLENWWWTAYESAYLGFVRLKQGNTVEAMFHSFRSVEGLLRQWSNVLYGDEIKQTKHPRSEENQRWDRNLNAYGEDLYWFLTVKKSVDVTKNLKQNTTPDIFIFGNLVFKKRNDLFHQLKGLEGQEKVFENWQSPNEPKWKQDPEGHWKLRVLKCLNFICGENFSSLEEASLLVKVHQKIERAISQL
>NZ_AP014644.1|WP_017291550.1|443057_444755_+|hypothetical-protein
MPDSDYVPLMFQAQVQGRSLIHQVKDLKKEAERLAVRKETLRQQAYDWAEQWQESCDVDTVPNFGNDVRKSKEYIFTWRMVTNSGQDEGVIRPVIGERGWAYFPGSSMKGAFLRACRQLHPDRVNRYCGGSAQEGEVHPGILRFHGGYPKDGAWLKNSMVDIVHPQANWQVSGSKLSHETPKVLISLHQPTFVFGISSTEPVLESEWTEIWKIWEKALERGIGSRVSAGYGQVKTHGESKLISVGLSGQGIASRRLDLEGEFRPNGFKAALRGHTHRLFHGITDHKTVNHLIKQLWGGIGKGESATVGLLGVAFSAPELELDEWVAAGNPNNHVPVYETGDAILNVLVMKDGLRQEQRDELKNFVIRLVKFSMLLGGFGRSWRRSDHRLFLPRYKRQMIGCHWTFTKPSRKLYIPVSDDKLVSITRFLDLFYQKAQEFSWLNEIENRKTPDHSCREAWCKDNVQVWGRIADGEEDSIAIKWLHQDYKRGSSIKQSELTGSMKQIGRLWHRMYPRYLKRGEEWIETQEYIELLTIFPNRSGDKDEIQKTANFLKFLQDFTDFKQLW
>NZ_AP014644.1|WP_017291551.1|442639_443068_+|hypothetical-protein
MSWKMYEIDRCAHDLVLKFRDKKDVLNESHKMRVTTAYGLERFWGEHLRLQRENQDKADYWKETWDELCRILRQAGIQIPNDPVSTENSAAIKTMTDKLWNFDQEQRKIALAILIELCDSLIWWTQRYKKPKQGVGGKTDAR
>NZ_AP014644.1|WP_017291552.1|441776_442643_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MYKKTYGIIETLAPLHVGATAGEESGNLNLIFRDQFTQTGILPGSSIRGRFRSEMRRDQSGDANYWYGSPAETGESDTTSESIVKFEYASLLWLPVFCPGQPIVWVSSPKLLKRYQRIAGNSVDGLKSIKTSAIDRLKYVGSSTLKTLNVEGKKKLFFNFGFLTLDKTEDLSIWFPNGEQLPAVVVGDDEIGMIHDMALYRQSRVRLMDREKRVDKGGFFNTEALPEGTIMVFPIAIRNTATTPWQPFGDGIETSEIYLGGLESIGFGNCQITLKNLNTVAHSQEVAA
>NZ_AP014644.1|WP_017291553.1|440763_441777_+|hypothetical-protein
MFQHLITIAPLGLMYGSAGAFLSPENLVGRSGAKFPPDASTVAGLFFSANHSLKGAIAPHDTLKHNLHIAGPFWAKRDQPEVFYVPVPRHRIIAEEQEDEWRLEKHRWQRDLQKEDIEAFYTWQSIDAWNRETRQIRTNREAAQAPWKYVSFLHPQMKAEERHVLDQDGLFLENAVQMDEDYCLVYLSTHAFPEGWYRFGGEGHMVEINSQSLSPSSIIHQLLQTPIDRACALITPGVWGSHNLSYRYPRHPEFPREGMQMLTDKATPCRYRLGNRTTERGRLSRGRYAVPVGTVYVFKHPLNRCWWDFPDDWFPDKGLMKKLGSGLCLPIQIQGVA
>NZ_AP014644.1|WP_017291554.1|439150_440779_+|hypothetical-protein
MPIYTAISFAPVQGFIEKSRKLRDLFGASLILSYLSQSLANAADQTPELKVISPALIHVQEGMPNRILIQGLFPRNEVEKVLIQAWDKVLQPCREWIETNVPVHDLYHWDAEWLRWKQYTWEIFWGKGDDPSAAMNDLERRKLKRDWVGINWTGESSSLTGTDAIAWHRLGEVRDPKHLLSEAEKRELKEFYRQLAWVLDDPHQRCGKIVDAGVEPEGKFIAANERLSLPELIKRLVTLPKLAKKIGLEDLAEGFKDIYREPGYWTGWFMGDGDQIGNKLKDIVQRYGDEKLEVFSHKMRSWGQTFQDDSTQFPQGKGRVIYAGGDDFLGVIYSEQNQSGEPAPEQVKPIDALNWLMQLPDQWQTLKTELWHDLEIEHTYSVGFVWAGHSVPQRDILQHCREAEKQAKSLGRDRVTIRIVFNNGQFIQWTCPWSYLSILTKYQDREGRTWGDAKLNWTHLYSDWEQLKARHAIRLTETDQYHADSYLALQLFNFYFDDAGKAIQKNPQDKRWKYLVGSNSELAIVQWIDSLIQIGWQLCSNI
>NZ_AP014644.1|WP_017291555.1|437786_438926_-|WYL-domain-containing-protein
MKLHPYSESDTFIRLMLLIATFVHHPGVGATPAIGANGTHDAMQLVLAQMQHVAHTLGFALPDYSVHTLRKDLKTLRQYGILDQRMYRWGYYLGTGALTQSELSIALQALAAQAQGDAALKQTYETLERRLRGLNLELEGQLLYPVRTQLQRSIIYTDPVEMMQQGHYRQTLFDHIERLQSAILQGLPIELCQRSNPYVPEETGQRLRVYGLQLVYADIAWYLLCEHLDNEHLSIVRLDRLSDHFQILNPQGRGLEQQFQSLQIAHQLLTTGWGLYLGSVEAQQQERLAQLEPIAVLVRFFPPVVDFILEGERRHPTQKVRRGKHGSYVDYHVTLPERSLSEFLHWVNRFMGAAEILAPASLQERHYQSAIALVQRYET
>NZ_AP014644.1|WP_017291545.1|454127_454292_-|hypothetical-protein
MIPDGFSRRFDWTKASGLVVAATVMEGVHQTLQVEGGWLLADLMMQQYSGMRSN
>NZ_AP014644.1|WP_026149057.1|454543_455164_-|hypothetical-protein
MATLGITKAITNLSEAHSRLGVSPSLDALTFFTEWKGTLPALTDTERARLDHLKQRYLYYADSGAITEGTVNLILLSPLLETLNFIDPPYQVRSEKYVRFEIEDGDTQLDGLIDALILQDRLWLILIESKRYGFSVRQALPQTLAYMVSAPTSPVFALITTGEDYLFVKFDRDSSRYALSDKLTLSTVEGNELHVVAQILKRLINS
>NZ_AP014644.1|WP_017291543.1|455315_455621_-|hypothetical-protein
MSSDSGSIEGNKTPRIDDFGVTVEEYLEGLAKGIDILEVRSLERWGIPSELVMELIEINKRVSNGTAKPEEVVRGLQIMSPPIRRQRINEQDAELIESDSP
>NZ_AP014644.1|WP_144056439.1|455787_456294_-|hypothetical-protein
MLRQQYEQTGNLLDILKNPAVMEEIIRLESEYGEIGAGFPAYSKNPQPVTPNQANAVMRKVRLQSMVLIDLAELIQSVNLGVGTEAAITEGRRRIREHLAHLTDEQQAYFDALVDEDQLQLLDKPLRARLKSVVHLLLSDSDWNAIGQAATNALQNQWNEFIRNSKTA
>NZ_AP014644.1|WP_017291541.1|456608_456992_-|hypothetical-protein
MSKRVFLTLPDGIADDLERWAASEKNKAATLAGFLVEEAVRRAKEQGKIPPDDGSFPHYDTLAELVRHNRNKLAESEKFSSARLKALSSGDKPTEVEILRLALILGRTEEYVLSLKTNPDVSEGSTN
>NZ_AP014644.1|WP_148664761.1|457179_457884_+|hypothetical-protein
MNDPLFNSVGDIAMITTKAFKEQHDLSDSAFKRLVRKAKRQYPGGEFTRRINSTQWEVLHPAILESLISTTVAEPEFTDSTMTANKSASHLLQPLNLVPLHSLVPSHSQTVEVIPTSKVSTIADLNGQRDRLMQGQSEIEMALEVVQQTRQLVGYVLSVQRSQTTVDTQQVTQLEDAAFELQVHADCLRREDRRTSIEQGYRDQRRSEAQTQVVQMRDFFARRTEATASSEVQP
>NZ_AP014644.1|WP_144056411.1|458085_458871_+|hypothetical-protein
MPIRGKSKTAQDPNSALKSKSKKAKAETPSATEPTKTPKPTTAPTGILPTIALPLPNIPFRTTPPMTLSGGSSTAIHRKDLTQVNHGLDIPEFQPNQWMAKDLFTNSSPLPETSQAEADQAVLSIARKRQTLRIVRENIGLNRDIVGAATEHQQLLGAVIQYSTELVNNQTKFVKYTDAGVKQQIAAVKLSQSQEQFTQETIALDGLRQMTPLIQEEWNERLELRRAKINGLREQTLNANARLASKRQELEAMFNVEFQTI
>NZ_AP014644.1|WP_017291538.1|458932_460447_+|hypothetical-protein
MPNTKSNDWIELMSFLGGIVSFILFLAAIAQQSRIAQSLSLLGLATSTGGIVACALSDRTNQTREEVEALTQRLSDRDLTLAAKDDRIVNLTAELNRVMAFVDHLKSAPISVDRTSHIVAQYQEKLNTLQARYRAEVERVKTEARSQHQTELDRLRSEMVAADTRIHEFEQRFLDRAQETLSEALTSFHDRISDLVMDNLRKLSHLEPETRDATFAERLQQLSEEVTDLHQTYVAQILNLSHFLDAENILDCSDEALSILYHLMDDYTSIKVKVINALKAKTIRELQTTIQAYQAADLVPKAQLEQLVKNLKLRLQEYELDAVQHQESVVAIANDYEAQTLEDDRIVRGYIDQLAKLEHDNHQLKEQVASLSALKKFDPGAWGWGADIGNQVIDYLMSENIPCDALPLDFSPTDSHLTIALNCRTEAGLRMLAKDGKEFEKGMAAAKGWSHVSLTLTGRVVKVTVQYANRAIAKTKPEAVLDRPISDWDLYLAAEYHWFIAAAC
>NZ_AP014644.1|WP_172410480.1|460596_462327_+|IS21-family-transposase
MSGKVKIYQVQVYMTAREKGFTQVEAAELAGFSARTGQRIEAGDHQPNRGRIRDWRSTPDPLAEVWESELEPMLKANPGLQPTTLFEWLQERYPGKYPQVLRTVQRRVAAWKALHGEPKEIMFELRHEPGMMGLSDFTELKGIEIRIAGKPFEHLLYHYRLAYSGWQYAQIIQGGESFIALSEGLQNALFACGGVPKQHRTDSLSAAYRNMGGARNKPLTRLYDDLCSHYRMQPTRNNTGIAHENGGIESPHGHLKNRIKQMLLLRGSHDFDSIADYQDLINRAIAKLNDLHPRKIEEEKQYLQPLPKYRVPDYEVLTATVSCRSTIDVRCVLYTVPSRLIGQSLELHLYHDRIIGYLNRHSVVELPRIRVSDKAKRRARCINYRHIAEGLRLKPRAFLYCTWQQELLPNQIWRELWSQLKCRFDLDSAAVLMVEALYIATTQDKEIAVASYLQAQLNANSLTLATLRKQFQLLSDLSLPNLTTTQHNLEHYDQLLHREPAHQSVSESQPPPQTTAPTSHAASLGNTRTTSDAGRLVLRTVLAGSVRIGSPTPMEQPYPTRSERSPTAKRKNGFQL
>NZ_AP014644.1|WP_172410481.1|462220_462895_+|ATP-binding-protein
MLVLCESEVQHRWSNRIQRALREAQLPSGKTVSNFDFSHCPSFNPAPLMQMADDPTWLGRAENLLLFGASGVGKSHLASAVSRRMVEFGKRVRFFSALALVQQLQQAKLQLQLQAMLKKLDRFDLLVLDDLGYVKKTEAETSVLFELIAHRYERKSLLITANQPFSQWDAIFTDSMMTVAAVDRLVHHALIVEIQTESYRKQSAVSRSEASKTAKKETVQPKRS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP014644_2	2.10\|447228\|43\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447228-447270	43	NZ_AP014642.1	210728-210770	0	1.0

1. spacer 2.10|447228|43|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to position: 210728-210770, mismatch: 0, identity: 1.0

cgcggatgttccccgtctttgagggcattccggtggtcatgga	CRISPR spacer
cgcggatgttccccgtctttgagggcattccggtggtcatgga	Protospacer
*******************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP014644_1	1.1\|366578\|54\|NZ_AP014644\|CRISPRCasFinder	366578-366631	54	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	138871-138924	0	1.0
NZ_AP014644_1	1.1\|366578\|54\|NZ_AP014644\|CRISPRCasFinder	366578-366631	54	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	366578-366631	0	1.0
NZ_AP014644_2	2.1\|446533\|37\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446533-446569	37	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	446533-446569	0	1.0
NZ_AP014644_2	2.1\|446533\|37\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446533-446569	37	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	58857-58893	0	1.0
NZ_AP014644_2	2.2\|446606\|38\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446606-446643	38	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	58783-58820	0	1.0
NZ_AP014644_2	2.2\|446606\|38\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446606-446643	38	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	446606-446643	0	1.0
NZ_AP014644_2	2.3\|446680\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446680-446720	41	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	58706-58746	0	1.0
NZ_AP014644_2	2.3\|446680\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446680-446720	41	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	446680-446720	0	1.0
NZ_AP014644_2	2.4\|446757\|48\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446757-446804	48	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	58622-58669	0	1.0
NZ_AP014644_2	2.4\|446757\|48\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446757-446804	48	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	446757-446804	0	1.0
NZ_AP014644_2	2.5\|446841\|37\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446841-446877	37	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	446841-446877	0	1.0
NZ_AP014644_2	2.5\|446841\|37\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446841-446877	37	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	58549-58585	0	1.0
NZ_AP014644_2	2.6\|446914\|44\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446914-446957	44	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	446914-446957	0	1.0
NZ_AP014644_2	2.6\|446914\|44\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446914-446957	44	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	58469-58512	0	1.0
NZ_AP014644_2	2.7\|446994\|43\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446994-447036	43	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	446994-447036	0	1.0
NZ_AP014644_2	2.7\|446994\|43\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	446994-447036	43	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	58390-58432	0	1.0
NZ_AP014644_2	2.8\|447073\|40\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447073-447112	40	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	447073-447112	0	1.0
NZ_AP014644_2	2.8\|447073\|40\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447073-447112	40	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	58314-58353	0	1.0
NZ_AP014644_2	2.9\|447149\|43\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447149-447191	43	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	58235-58277	0	1.0
NZ_AP014644_2	2.9\|447149\|43\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447149-447191	43	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	447149-447191	0	1.0
NZ_AP014644_2	2.10\|447228\|43\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447228-447270	43	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	58156-58198	0	1.0
NZ_AP014644_2	2.10\|447228\|43\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447228-447270	43	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	447228-447270	0	1.0
NZ_AP014644_2	2.11\|447307\|42\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447307-447348	42	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	58078-58119	0	1.0
NZ_AP014644_2	2.11\|447307\|42\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447307-447348	42	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	447307-447348	0	1.0
NZ_AP014644_2	2.12\|447385\|38\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447385-447422	38	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	447385-447422	0	1.0
NZ_AP014644_2	2.12\|447385\|38\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447385-447422	38	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	58004-58041	0	1.0
NZ_AP014644_2	2.13\|447459\|40\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447459-447498	40	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57928-57967	0	1.0
NZ_AP014644_2	2.13\|447459\|40\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447459-447498	40	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	447459-447498	0	1.0
NZ_AP014644_2	2.14\|447535\|40\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447535-447574	40	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	447535-447574	0	1.0
NZ_AP014644_2	2.14\|447535\|40\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	447535-447574	40	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57852-57891	0	1.0
NZ_AP014644_2	2.15\|447611\|44\|NZ_AP014644\|CRISPRCasFinder,CRT	447611-447654	44	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	447611-447654	0	1.0
NZ_AP014644_2	2.15\|447611\|44\|NZ_AP014644\|CRISPRCasFinder,CRT	447611-447654	44	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57772-57815	0	1.0
NZ_AP014644_2	2.16\|447691\|52\|NZ_AP014644\|CRISPRCasFinder,CRT	447691-447742	52	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	447691-447742	0	1.0
NZ_AP014644_2	2.16\|447691\|52\|NZ_AP014644\|CRISPRCasFinder,CRT	447691-447742	52	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57684-57735	0	1.0
NZ_AP014644_2	2.17\|447779\|40\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	447779-447818	40	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57608-57647	0	1.0
NZ_AP014644_2	2.17\|447779\|40\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	447779-447818	40	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	447779-447818	0	1.0
NZ_AP014644_2	2.18\|447855\|38\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	447855-447892	38	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	447855-447892	0	1.0
NZ_AP014644_2	2.18\|447855\|38\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	447855-447892	38	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57534-57571	0	1.0
NZ_AP014644_2	2.19\|447929\|45\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	447929-447973	45	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	447929-447973	0	1.0
NZ_AP014644_2	2.19\|447929\|45\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	447929-447973	45	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57453-57497	0	1.0
NZ_AP014644_2	2.20\|448010\|42\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448010-448051	42	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448010-448051	0	1.0
NZ_AP014644_2	2.20\|448010\|42\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448010-448051	42	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57375-57416	0	1.0
NZ_AP014644_2	2.21\|448088\|48\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448088-448135	48	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448088-448135	0	1.0
NZ_AP014644_2	2.21\|448088\|48\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448088-448135	48	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57291-57338	0	1.0
NZ_AP014644_2	2.22\|448172\|36\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448172-448207	36	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57219-57254	0	1.0
NZ_AP014644_2	2.22\|448172\|36\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448172-448207	36	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448172-448207	0	1.0
NZ_AP014644_2	2.23\|448244\|36\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448244-448279	36	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448244-448279	0	1.0
NZ_AP014644_2	2.23\|448244\|36\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448244-448279	36	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57147-57182	0	1.0
NZ_AP014644_2	2.24\|448316\|37\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448316-448352	37	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57074-57110	0	1.0
NZ_AP014644_2	2.24\|448316\|37\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448316-448352	37	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448316-448352	0	1.0
NZ_AP014644_2	2.25\|448389\|36\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448389-448424	36	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	57002-57037	0	1.0
NZ_AP014644_2	2.25\|448389\|36\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448389-448424	36	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448389-448424	0	1.0
NZ_AP014644_2	2.26\|448461\|34\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448461-448494	34	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448461-448494	0	1.0
NZ_AP014644_2	2.26\|448461\|34\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448461-448494	34	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56932-56965	0	1.0
NZ_AP014644_2	2.27\|448531\|45\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448531-448575	45	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56851-56895	0	1.0
NZ_AP014644_2	2.27\|448531\|45\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448531-448575	45	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448531-448575	0	1.0
NZ_AP014644_2	2.28\|448612\|37\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448612-448648	37	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448612-448648	0	1.0
NZ_AP014644_2	2.28\|448612\|37\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448612-448648	37	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56778-56814	0	1.0
NZ_AP014644_2	2.29\|448685\|40\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448685-448724	40	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448685-448724	0	1.0
NZ_AP014644_2	2.29\|448685\|40\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448685-448724	40	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56702-56741	0	1.0
NZ_AP014644_2	2.30\|448761\|35\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448761-448795	35	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448761-448795	0	1.0
NZ_AP014644_2	2.30\|448761\|35\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448761-448795	35	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56631-56665	0	1.0
NZ_AP014644_2	2.31\|448832\|42\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448832-448873	42	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448832-448873	0	1.0
NZ_AP014644_2	2.31\|448832\|42\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448832-448873	42	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56553-56594	0	1.0
NZ_AP014644_2	2.32\|448910\|39\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448910-448948	39	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56478-56516	0	1.0
NZ_AP014644_2	2.32\|448910\|39\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448910-448948	39	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448910-448948	0	1.0
NZ_AP014644_2	2.33\|448985\|39\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448985-449023	39	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	448985-449023	0	1.0
NZ_AP014644_2	2.33\|448985\|39\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	448985-449023	39	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56403-56441	0	1.0
NZ_AP014644_2	2.34\|449060\|42\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449060-449101	42	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	449060-449101	0	1.0
NZ_AP014644_2	2.34\|449060\|42\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449060-449101	42	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56325-56366	0	1.0
NZ_AP014644_2	2.35\|449138\|36\|NZ_AP014644\|CRISPRCasFinder,CRT	449138-449173	36	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56253-56288	0	1.0
NZ_AP014644_2	2.35\|449138\|36\|NZ_AP014644\|CRISPRCasFinder,CRT	449138-449173	36	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	449138-449173	0	1.0
NZ_AP014644_2	2.36\|449210\|48\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449210-449257	48	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	449210-449257	0	1.0
NZ_AP014644_2	2.36\|449210\|48\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449210-449257	48	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56169-56216	0	1.0
NZ_AP014644_2	2.37\|449294\|40\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449294-449333	40	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56093-56132	0	1.0
NZ_AP014644_2	2.37\|449294\|40\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449294-449333	40	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	449294-449333	0	1.0
NZ_AP014644_2	2.38\|449370\|39\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449370-449408	39	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	56018-56056	0	1.0
NZ_AP014644_2	2.38\|449370\|39\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449370-449408	39	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	449370-449408	0	1.0
NZ_AP014644_2	2.39\|449445\|35\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449445-449479	35	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	449445-449479	0	1.0
NZ_AP014644_2	2.39\|449445\|35\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449445-449479	35	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	55947-55981	0	1.0
NZ_AP014644_2	2.40\|449516\|39\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449516-449554	39	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	449516-449554	0	1.0
NZ_AP014644_2	2.40\|449516\|39\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449516-449554	39	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	55872-55910	0	1.0
NZ_AP014644_2	2.41\|449591\|41\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449591-449631	41	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	449591-449631	0	1.0
NZ_AP014644_2	2.41\|449591\|41\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449591-449631	41	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	55795-55835	0	1.0
NZ_AP014644_3	3.1\|451825\|42\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	451825-451866	42	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	451825-451866	0	1.0
NZ_AP014644_3	3.1\|451825\|42\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	451825-451866	42	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	53560-53601	0	1.0
NZ_AP014644_3	3.2\|451903\|38\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	451903-451940	38	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	451903-451940	0	1.0
NZ_AP014644_3	3.2\|451903\|38\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	451903-451940	38	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	53486-53523	0	1.0
NZ_AP014644_3	3.3\|451977\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	451977-452017	41	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	53409-53449	0	1.0
NZ_AP014644_3	3.3\|451977\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	451977-452017	41	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	451977-452017	0	1.0
NZ_AP014644_3	3.4\|452054\|38\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452054-452091	38	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	53335-53372	0	1.0
NZ_AP014644_3	3.4\|452054\|38\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452054-452091	38	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452054-452091	0	1.0
NZ_AP014644_3	3.5\|452128\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452128-452168	41	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452128-452168	0	1.0
NZ_AP014644_3	3.5\|452128\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452128-452168	41	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	53258-53298	0	1.0
NZ_AP014644_3	3.6\|452205\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452205-452245	41	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452205-452245	0	1.0
NZ_AP014644_3	3.6\|452205\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452205-452245	41	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	53181-53221	0	1.0
NZ_AP014644_3	3.7\|452282\|40\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452282-452321	40	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452282-452321	0	1.0
NZ_AP014644_3	3.7\|452282\|40\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452282-452321	40	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	53105-53144	0	1.0
NZ_AP014644_3	3.8\|452358\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452358-452398	41	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	53028-53068	0	1.0
NZ_AP014644_3	3.8\|452358\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452358-452398	41	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452358-452398	0	1.0
NZ_AP014644_3	3.9\|452435\|49\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452435-452483	49	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452435-452483	0	1.0
NZ_AP014644_3	3.9\|452435\|49\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452435-452483	49	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	52943-52991	0	1.0
NZ_AP014644_3	3.10\|452520\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452520-452560	41	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452520-452560	0	1.0
NZ_AP014644_3	3.10\|452520\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452520-452560	41	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	52866-52906	0	1.0
NZ_AP014644_3	3.11\|452597\|46\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452597-452642	46	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452597-452642	0	1.0
NZ_AP014644_3	3.11\|452597\|46\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452597-452642	46	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	52784-52829	0	1.0
NZ_AP014644_3	3.12\|452679\|40\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452679-452718	40	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452679-452718	0	1.0
NZ_AP014644_3	3.12\|452679\|40\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452679-452718	40	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	52708-52747	0	1.0
NZ_AP014644_3	3.13\|452755\|46\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452755-452800	46	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	52626-52671	0	1.0
NZ_AP014644_3	3.13\|452755\|46\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452755-452800	46	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452755-452800	0	1.0
NZ_AP014644_3	3.14\|452837\|43\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452837-452879	43	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452837-452879	0	1.0
NZ_AP014644_3	3.14\|452837\|43\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452837-452879	43	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	52547-52589	0	1.0
NZ_AP014644_3	3.15\|452916\|39\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452916-452954	39	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	52472-52510	0	1.0
NZ_AP014644_3	3.15\|452916\|39\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452916-452954	39	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452916-452954	0	1.0
NZ_AP014644_3	3.16\|452991\|52\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452991-453042	52	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	52384-52435	0	1.0
NZ_AP014644_3	3.16\|452991\|52\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	452991-453042	52	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	452991-453042	0	1.0
NZ_AP014644_3	3.17\|453079\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453079-453119	41	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	453079-453119	0	1.0
NZ_AP014644_3	3.17\|453079\|41\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453079-453119	41	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	52307-52347	0	1.0
NZ_AP014644_3	3.18\|453156\|39\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453156-453194	39	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	52232-52270	0	1.0
NZ_AP014644_3	3.18\|453156\|39\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453156-453194	39	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	453156-453194	0	1.0
NZ_AP014644_3	3.19\|453231\|46\|NZ_AP014644\|CRISPRCasFinder,CRT	453231-453276	46	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	453231-453276	0	1.0
NZ_AP014644_3	3.19\|453231\|46\|NZ_AP014644\|CRISPRCasFinder,CRT	453231-453276	46	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	52150-52195	0	1.0
NZ_AP014644_4	4.1\|453754\|33\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453754-453786	33	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	453754-453786	0	1.0
NZ_AP014644_4	4.1\|453754\|33\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453754-453786	33	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	51640-51672	0	1.0
NZ_AP014644_4	4.2\|453823\|35\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453823-453857	35	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	453823-453857	0	1.0
NZ_AP014644_4	4.2\|453823\|35\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453823-453857	35	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	51569-51603	0	1.0
NZ_AP014644_4	4.3\|453894\|36\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453894-453929	36	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	453894-453929	0	1.0
NZ_AP014644_4	4.3\|453894\|36\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453894-453929	36	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	51497-51532	0	1.0
NZ_AP014644_4	4.4\|453966\|37\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453966-454002	37	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	453966-454002	0	1.0
NZ_AP014644_4	4.4\|453966\|37\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453966-454002	37	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	51424-51460	0	1.0
NZ_AP014644_4	4.5\|454039\|42\|NZ_AP014644\|PILER-CR,CRT	454039-454080	42	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	454039-454080	0	1.0
NZ_AP014644_4	4.5\|454039\|42\|NZ_AP014644\|PILER-CR,CRT	454039-454080	42	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	51346-51387	0	1.0
NZ_AP014644_2	2.18\|447855\|38\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	447855-447892	38	NC_008367	Phormidium phage Pf-WMP4, complete genome	40829-40866	1	0.974
NZ_AP014644_2	2.18\|447855\|38\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	447855-447892	38	DQ875742	Cyanophage Pf-WMP4, complete genome	40829-40866	1	0.974
NZ_AP014644_2	2.18\|447855\|38\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	447855-447892	38	NC_008367	Phormidium phage Pf-WMP4, complete genome	1-35	4	0.895
NZ_AP014644_2	2.18\|447855\|38\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	447855-447892	38	DQ875742	Cyanophage Pf-WMP4, complete genome	1-35	4	0.895
NZ_AP014644_2	2.39\|449445\|35\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449445-449479	35	MN692960	Marine virus AFVG_117M7, complete genome	34102-34136	8	0.771
NZ_AP014644_2	2.39\|449445\|35\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449445-449479	35	MN692988	Marine virus AFVG_117M76, complete genome	4825-4859	8	0.771
NZ_AP014644_2	2.39\|449445\|35\|NZ_AP014644\|CRISPRCasFinder,CRT,PILER-CR	449445-449479	35	MN692984	Marine virus AFVG_117M10, complete genome	3359-3393	8	0.771
NZ_AP014644_4	4.1\|453754\|33\|NZ_AP014644\|PILER-CR,CRISPRCasFinder,CRT	453754-453786	33	MF141539	Mycobacterium phage MyraDee, complete genome	4486-4518	8	0.758

1. spacer 1.1|366578|54|NZ_AP014644|CRISPRCasFinder matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ttcatagagagcttaactgaaaatggaggacttaatctgattcaacaagctgaa	CRISPR spacer
ttcatagagagcttaactgaaaatggaggacttaatctgattcaacaagctgaa	Protospacer
******************************************************

2. spacer 1.1|366578|54|NZ_AP014644|CRISPRCasFinder matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ttcatagagagcttaactgaaaatggaggacttaatctgattcaacaagctgaa	CRISPR spacer
ttcatagagagcttaactgaaaatggaggacttaatctgattcaacaagctgaa	Protospacer
******************************************************

3. spacer 2.1|446533|37|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tcgagaacgtaacgagaagcaacggacatagagccag	CRISPR spacer
tcgagaacgtaacgagaagcaacggacatagagccag	Protospacer
*************************************

4. spacer 2.1|446533|37|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tcgagaacgtaacgagaagcaacggacatagagccag	CRISPR spacer
tcgagaacgtaacgagaagcaacggacatagagccag	Protospacer
*************************************

5. spacer 2.2|446606|38|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ctacgatccggctgactactaaccccaacgcgcagcaa	CRISPR spacer
ctacgatccggctgactactaaccccaacgcgcagcaa	Protospacer
**************************************

6. spacer 2.2|446606|38|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ctacgatccggctgactactaaccccaacgcgcagcaa	CRISPR spacer
ctacgatccggctgactactaaccccaacgcgcagcaa	Protospacer
**************************************

7. spacer 2.3|446680|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ttctcagtttacgattgtggcgtgattgtggcgtgatcggg	CRISPR spacer
ttctcagtttacgattgtggcgtgattgtggcgtgatcggg	Protospacer
*****************************************

8. spacer 2.3|446680|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ttctcagtttacgattgtggcgtgattgtggcgtgatcggg	CRISPR spacer
ttctcagtttacgattgtggcgtgattgtggcgtgatcggg	Protospacer
*****************************************

9. spacer 2.4|446757|48|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ctgaaccatttgtaacttactcagctactttttaattcttattttaag	CRISPR spacer
ctgaaccatttgtaacttactcagctactttttaattcttattttaag	Protospacer
************************************************

10. spacer 2.4|446757|48|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ctgaaccatttgtaacttactcagctactttttaattcttattttaag	CRISPR spacer
ctgaaccatttgtaacttactcagctactttttaattcttattttaag	Protospacer
************************************************

11. spacer 2.5|446841|37|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ctcttccctgtcttccgttccgctgcaacgtctcgat	CRISPR spacer
ctcttccctgtcttccgttccgctgcaacgtctcgat	Protospacer
*************************************

12. spacer 2.5|446841|37|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ctcttccctgtcttccgttccgctgcaacgtctcgat	CRISPR spacer
ctcttccctgtcttccgttccgctgcaacgtctcgat	Protospacer
*************************************

13. spacer 2.6|446914|44|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tcaccagagaatgccatctgcattagtgcaccccccatattcta	CRISPR spacer
tcaccagagaatgccatctgcattagtgcaccccccatattcta	Protospacer
********************************************

14. spacer 2.6|446914|44|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tcaccagagaatgccatctgcattagtgcaccccccatattcta	CRISPR spacer
tcaccagagaatgccatctgcattagtgcaccccccatattcta	Protospacer
********************************************

15. spacer 2.7|446994|43|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tgtaaagctctttcatagcttcaaatcctttactgaaggtcgg	CRISPR spacer
tgtaaagctctttcatagcttcaaatcctttactgaaggtcgg	Protospacer
*******************************************

16. spacer 2.7|446994|43|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tgtaaagctctttcatagcttcaaatcctttactgaaggtcgg	CRISPR spacer
tgtaaagctctttcatagcttcaaatcctttactgaaggtcgg	Protospacer
*******************************************

17. spacer 2.8|447073|40|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

atgaagcgcttagtgcctttgctttgaaacttcaagaatg	CRISPR spacer
atgaagcgcttagtgcctttgctttgaaacttcaagaatg	Protospacer
****************************************

18. spacer 2.8|447073|40|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

atgaagcgcttagtgcctttgctttgaaacttcaagaatg	CRISPR spacer
atgaagcgcttagtgcctttgctttgaaacttcaagaatg	Protospacer
****************************************

19. spacer 2.9|447149|43|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

attttacgcccttcagaaagaatcatttttgactcaataactt	CRISPR spacer
attttacgcccttcagaaagaatcatttttgactcaataactt	Protospacer
*******************************************

20. spacer 2.9|447149|43|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

attttacgcccttcagaaagaatcatttttgactcaataactt	CRISPR spacer
attttacgcccttcagaaagaatcatttttgactcaataactt	Protospacer
*******************************************

21. spacer 2.10|447228|43|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cgcggatgttccccgtctttgagggcattccggtggtcatgga	CRISPR spacer
cgcggatgttccccgtctttgagggcattccggtggtcatgga	Protospacer
*******************************************

22. spacer 2.10|447228|43|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

cgcggatgttccccgtctttgagggcattccggtggtcatgga	CRISPR spacer
cgcggatgttccccgtctttgagggcattccggtggtcatgga	Protospacer
*******************************************

23. spacer 2.11|447307|42|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gttggtttgtagcgatttggcaattgatacatcgctctcgat	CRISPR spacer
gttggtttgtagcgatttggcaattgatacatcgctctcgat	Protospacer
******************************************

24. spacer 2.11|447307|42|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

gttggtttgtagcgatttggcaattgatacatcgctctcgat	CRISPR spacer
gttggtttgtagcgatttggcaattgatacatcgctctcgat	Protospacer
******************************************

25. spacer 2.12|447385|38|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

cttgccataactgacagacaaggtgtcaggggatttgc	CRISPR spacer
cttgccataactgacagacaaggtgtcaggggatttgc	Protospacer
**************************************

26. spacer 2.12|447385|38|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cttgccataactgacagacaaggtgtcaggggatttgc	CRISPR spacer
cttgccataactgacagacaaggtgtcaggggatttgc	Protospacer
**************************************

27. spacer 2.13|447459|40|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gctgtttttctcgacctggaattagaagcctagctggaaa	CRISPR spacer
gctgtttttctcgacctggaattagaagcctagctggaaa	Protospacer
****************************************

28. spacer 2.13|447459|40|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

gctgtttttctcgacctggaattagaagcctagctggaaa	CRISPR spacer
gctgtttttctcgacctggaattagaagcctagctggaaa	Protospacer
****************************************

29. spacer 2.14|447535|40|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

catcaactgcggtgtcagattctaaaccataaccattgtt	CRISPR spacer
catcaactgcggtgtcagattctaaaccataaccattgtt	Protospacer
****************************************

30. spacer 2.14|447535|40|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

catcaactgcggtgtcagattctaaaccataaccattgtt	CRISPR spacer
catcaactgcggtgtcagattctaaaccataaccattgtt	Protospacer
****************************************

31. spacer 2.15|447611|44|NZ_AP014644|CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

agttctgtctatgttcgtgaccgttgtttctaatccgctagcaa	CRISPR spacer
agttctgtctatgttcgtgaccgttgtttctaatccgctagcaa	Protospacer
********************************************

32. spacer 2.15|447611|44|NZ_AP014644|CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

agttctgtctatgttcgtgaccgttgtttctaatccgctagcaa	CRISPR spacer
agttctgtctatgttcgtgaccgttgtttctaatccgctagcaa	Protospacer
********************************************

33. spacer 2.16|447691|52|NZ_AP014644|CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ttgatgcattcgtaggtcgcagttcagtaagtggtgatcacttcgagcgtga	CRISPR spacer
ttgatgcattcgtaggtcgcagttcagtaagtggtgatcacttcgagcgtga	Protospacer
****************************************************

34. spacer 2.16|447691|52|NZ_AP014644|CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ttgatgcattcgtaggtcgcagttcagtaagtggtgatcacttcgagcgtga	CRISPR spacer
ttgatgcattcgtaggtcgcagttcagtaagtggtgatcacttcgagcgtga	Protospacer
****************************************************

35. spacer 2.17|447779|40|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ttgggtaaagggagctgatcgggcgtttgaatcgactgta	CRISPR spacer
ttgggtaaagggagctgatcgggcgtttgaatcgactgta	Protospacer
****************************************

36. spacer 2.17|447779|40|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ttgggtaaagggagctgatcgggcgtttgaatcgactgta	CRISPR spacer
ttgggtaaagggagctgatcgggcgtttgaatcgactgta	Protospacer
****************************************

37. spacer 2.18|447855|38|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ccacccacacggggggacgggcgctccacctatatgta	CRISPR spacer
ccacccacacggggggacgggcgctccacctatatgta	Protospacer
**************************************

38. spacer 2.18|447855|38|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ccacccacacggggggacgggcgctccacctatatgta	CRISPR spacer
ccacccacacggggggacgggcgctccacctatatgta	Protospacer
**************************************

39. spacer 2.19|447929|45|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ggaatggatcaaagttgccatttgcatccaaatagataggatcaa	CRISPR spacer
ggaatggatcaaagttgccatttgcatccaaatagataggatcaa	Protospacer
*********************************************

40. spacer 2.19|447929|45|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ggaatggatcaaagttgccatttgcatccaaatagataggatcaa	CRISPR spacer
ggaatggatcaaagttgccatttgcatccaaatagataggatcaa	Protospacer
*********************************************

41. spacer 2.20|448010|42|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

acggttagcgttctgcttaccaaagattttccaaataggcat	CRISPR spacer
acggttagcgttctgcttaccaaagattttccaaataggcat	Protospacer
******************************************

42. spacer 2.20|448010|42|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

acggttagcgttctgcttaccaaagattttccaaataggcat	CRISPR spacer
acggttagcgttctgcttaccaaagattttccaaataggcat	Protospacer
******************************************

43. spacer 2.21|448088|48|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ttcaaactgctcgtcaaatacctcatcccctgcatgtcccatctctag	CRISPR spacer
ttcaaactgctcgtcaaatacctcatcccctgcatgtcccatctctag	Protospacer
************************************************

44. spacer 2.21|448088|48|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ttcaaactgctcgtcaaatacctcatcccctgcatgtcccatctctag	CRISPR spacer
ttcaaactgctcgtcaaatacctcatcccctgcatgtcccatctctag	Protospacer
************************************************

45. spacer 2.22|448172|36|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tcattaatcagcgaaagacttcttacttgcggcggt	CRISPR spacer
tcattaatcagcgaaagacttcttacttgcggcggt	Protospacer
************************************

46. spacer 2.22|448172|36|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tcattaatcagcgaaagacttcttacttgcggcggt	CRISPR spacer
tcattaatcagcgaaagacttcttacttgcggcggt	Protospacer
************************************

47. spacer 2.23|448244|36|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tcacttgcagccgctttgatttcggctaattcctgg	CRISPR spacer
tcacttgcagccgctttgatttcggctaattcctgg	Protospacer
************************************

48. spacer 2.23|448244|36|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tcacttgcagccgctttgatttcggctaattcctgg	CRISPR spacer
tcacttgcagccgctttgatttcggctaattcctgg	Protospacer
************************************

49. spacer 2.24|448316|37|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tgaagttcaaagcgagtccaacttgttcgagtgtttt	CRISPR spacer
tgaagttcaaagcgagtccaacttgttcgagtgtttt	Protospacer
*************************************

50. spacer 2.24|448316|37|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tgaagttcaaagcgagtccaacttgttcgagtgtttt	CRISPR spacer
tgaagttcaaagcgagtccaacttgttcgagtgtttt	Protospacer
*************************************

51. spacer 2.25|448389|36|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

acagttcaggcaacgaagcttgcggcgaattgcgac	CRISPR spacer
acagttcaggcaacgaagcttgcggcgaattgcgac	Protospacer
************************************

52. spacer 2.25|448389|36|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

acagttcaggcaacgaagcttgcggcgaattgcgac	CRISPR spacer
acagttcaggcaacgaagcttgcggcgaattgcgac	Protospacer
************************************

53. spacer 2.26|448461|34|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

atcacaagcttgtatccaatagaaggtgtacccg	CRISPR spacer
atcacaagcttgtatccaatagaaggtgtacccg	Protospacer
**********************************

54. spacer 2.26|448461|34|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

atcacaagcttgtatccaatagaaggtgtacccg	CRISPR spacer
atcacaagcttgtatccaatagaaggtgtacccg	Protospacer
**********************************

55. spacer 2.27|448531|45|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tttatgggtttttatcgaatagattgggtgataaaggcttatctg	CRISPR spacer
tttatgggtttttatcgaatagattgggtgataaaggcttatctg	Protospacer
*********************************************

56. spacer 2.27|448531|45|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tttatgggtttttatcgaatagattgggtgataaaggcttatctg	CRISPR spacer
tttatgggtttttatcgaatagattgggtgataaaggcttatctg	Protospacer
*********************************************

57. spacer 2.28|448612|37|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

caaatttgtatcagcagcaatactaattagtctttca	CRISPR spacer
caaatttgtatcagcagcaatactaattagtctttca	Protospacer
*************************************

58. spacer 2.28|448612|37|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

caaatttgtatcagcagcaatactaattagtctttca	CRISPR spacer
caaatttgtatcagcagcaatactaattagtctttca	Protospacer
*************************************

59. spacer 2.29|448685|40|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

gccagcacagcacacatgtcttagcctcaaacgtggggag	CRISPR spacer
gccagcacagcacacatgtcttagcctcaaacgtggggag	Protospacer
****************************************

60. spacer 2.29|448685|40|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gccagcacagcacacatgtcttagcctcaaacgtggggag	CRISPR spacer
gccagcacagcacacatgtcttagcctcaaacgtggggag	Protospacer
****************************************

61. spacer 2.30|448761|35|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tccaagaacagaacgcaaaatctaattgttttagt	CRISPR spacer
tccaagaacagaacgcaaaatctaattgttttagt	Protospacer
***********************************

62. spacer 2.30|448761|35|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tccaagaacagaacgcaaaatctaattgttttagt	CRISPR spacer
tccaagaacagaacgcaaaatctaattgttttagt	Protospacer
***********************************

63. spacer 2.31|448832|42|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

atgaaagatgtgcagattatgagtgccaagattgcatcacaa	CRISPR spacer
atgaaagatgtgcagattatgagtgccaagattgcatcacaa	Protospacer
******************************************

64. spacer 2.31|448832|42|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

atgaaagatgtgcagattatgagtgccaagattgcatcacaa	CRISPR spacer
atgaaagatgtgcagattatgagtgccaagattgcatcacaa	Protospacer
******************************************

65. spacer 2.32|448910|39|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ccgcgcaaattgctcactggacacaaacgcagagcgaat	CRISPR spacer
ccgcgcaaattgctcactggacacaaacgcagagcgaat	Protospacer
***************************************

66. spacer 2.32|448910|39|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ccgcgcaaattgctcactggacacaaacgcagagcgaat	CRISPR spacer
ccgcgcaaattgctcactggacacaaacgcagagcgaat	Protospacer
***************************************

67. spacer 2.33|448985|39|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tacttgtattgctcgaagttgatcttcggtgccgtgagt	CRISPR spacer
tacttgtattgctcgaagttgatcttcggtgccgtgagt	Protospacer
***************************************

68. spacer 2.33|448985|39|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tacttgtattgctcgaagttgatcttcggtgccgtgagt	CRISPR spacer
tacttgtattgctcgaagttgatcttcggtgccgtgagt	Protospacer
***************************************

69. spacer 2.34|449060|42|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tagatctgaatctaagatcaagaatctgaattaagatctgag	CRISPR spacer
tagatctgaatctaagatcaagaatctgaattaagatctgag	Protospacer
******************************************

70. spacer 2.34|449060|42|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tagatctgaatctaagatcaagaatctgaattaagatctgag	CRISPR spacer
tagatctgaatctaagatcaagaatctgaattaagatctgag	Protospacer
******************************************

71. spacer 2.35|449138|36|NZ_AP014644|CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ctaagaaggtagtagtcaaacgctccaccatacgag	CRISPR spacer
ctaagaaggtagtagtcaaacgctccaccatacgag	Protospacer
************************************

72. spacer 2.35|449138|36|NZ_AP014644|CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ctaagaaggtagtagtcaaacgctccaccatacgag	CRISPR spacer
ctaagaaggtagtagtcaaacgctccaccatacgag	Protospacer
************************************

73. spacer 2.36|449210|48|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tctagaagtacattattgttaattactggcatttaatatctacctcca	CRISPR spacer
tctagaagtacattattgttaattactggcatttaatatctacctcca	Protospacer
************************************************

74. spacer 2.36|449210|48|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tctagaagtacattattgttaattactggcatttaatatctacctcca	CRISPR spacer
tctagaagtacattattgttaattactggcatttaatatctacctcca	Protospacer
************************************************

75. spacer 2.37|449294|40|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tgaaatattaaataatggatgctctgaaagtaaagctaca	CRISPR spacer
tgaaatattaaataatggatgctctgaaagtaaagctaca	Protospacer
****************************************

76. spacer 2.37|449294|40|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tgaaatattaaataatggatgctctgaaagtaaagctaca	CRISPR spacer
tgaaatattaaataatggatgctctgaaagtaaagctaca	Protospacer
****************************************

77. spacer 2.38|449370|39|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cacgatcattgctattaccagagccaataaaattgatgc	CRISPR spacer
cacgatcattgctattaccagagccaataaaattgatgc	Protospacer
***************************************

78. spacer 2.38|449370|39|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

cacgatcattgctattaccagagccaataaaattgatgc	CRISPR spacer
cacgatcattgctattaccagagccaataaaattgatgc	Protospacer
***************************************

79. spacer 2.39|449445|35|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ctgtatcttttctagcttgatctaatttctttgat	CRISPR spacer
ctgtatcttttctagcttgatctaatttctttgat	Protospacer
***********************************

80. spacer 2.39|449445|35|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ctgtatcttttctagcttgatctaatttctttgat	CRISPR spacer
ctgtatcttttctagcttgatctaatttctttgat	Protospacer
***********************************

81. spacer 2.40|449516|39|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tagataaacaggattgtgtctgcatcctgttcaatgttg	CRISPR spacer
tagataaacaggattgtgtctgcatcctgttcaatgttg	Protospacer
***************************************

82. spacer 2.40|449516|39|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tagataaacaggattgtgtctgcatcctgttcaatgttg	CRISPR spacer
tagataaacaggattgtgtctgcatcctgttcaatgttg	Protospacer
***************************************

83. spacer 2.41|449591|41|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

gaatcgaattgatgtaattctgcctttcgatggtcataaga	CRISPR spacer
gaatcgaattgatgtaattctgcctttcgatggtcataaga	Protospacer
*****************************************

84. spacer 2.41|449591|41|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gaatcgaattgatgtaattctgcctttcgatggtcataaga	CRISPR spacer
gaatcgaattgatgtaattctgcctttcgatggtcataaga	Protospacer
*****************************************

85. spacer 3.1|451825|42|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

aagagtcgcttctttagtaaagaaagcattaagctcagcttc	CRISPR spacer
aagagtcgcttctttagtaaagaaagcattaagctcagcttc	Protospacer
******************************************

86. spacer 3.1|451825|42|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

aagagtcgcttctttagtaaagaaagcattaagctcagcttc	CRISPR spacer
aagagtcgcttctttagtaaagaaagcattaagctcagcttc	Protospacer
******************************************

87. spacer 3.2|451903|38|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

gagcatactttaccagcccattgaattccttctacagt	CRISPR spacer
gagcatactttaccagcccattgaattccttctacagt	Protospacer
**************************************

88. spacer 3.2|451903|38|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gagcatactttaccagcccattgaattccttctacagt	CRISPR spacer
gagcatactttaccagcccattgaattccttctacagt	Protospacer
**************************************

89. spacer 3.3|451977|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

aaggtttggatttgcattatcgtgataatgcttattagctt	CRISPR spacer
aaggtttggatttgcattatcgtgataatgcttattagctt	Protospacer
*****************************************

90. spacer 3.3|451977|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

aaggtttggatttgcattatcgtgataatgcttattagctt	CRISPR spacer
aaggtttggatttgcattatcgtgataatgcttattagctt	Protospacer
*****************************************

91. spacer 3.4|452054|38|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

catttcttctaaagtagaaggaacaggttcgaagggtt	CRISPR spacer
catttcttctaaagtagaaggaacaggttcgaagggtt	Protospacer
**************************************

92. spacer 3.4|452054|38|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

catttcttctaaagtagaaggaacaggttcgaagggtt	CRISPR spacer
catttcttctaaagtagaaggaacaggttcgaagggtt	Protospacer
**************************************

93. spacer 3.5|452128|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ataagatcacccacaaaagaaagctgatatttattacctaa	CRISPR spacer
ataagatcacccacaaaagaaagctgatatttattacctaa	Protospacer
*****************************************

94. spacer 3.5|452128|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ataagatcacccacaaaagaaagctgatatttattacctaa	CRISPR spacer
ataagatcacccacaaaagaaagctgatatttattacctaa	Protospacer
*****************************************

95. spacer 3.6|452205|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ccgggattaatcccagccaaacaactccaatttcactggct	CRISPR spacer
ccgggattaatcccagccaaacaactccaatttcactggct	Protospacer
*****************************************

96. spacer 3.6|452205|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ccgggattaatcccagccaaacaactccaatttcactggct	CRISPR spacer
ccgggattaatcccagccaaacaactccaatttcactggct	Protospacer
*****************************************

97. spacer 3.7|452282|40|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

gtcagggttgataccatacgcaccaagatattctctccac	CRISPR spacer
gtcagggttgataccatacgcaccaagatattctctccac	Protospacer
****************************************

98. spacer 3.7|452282|40|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gtcagggttgataccatacgcaccaagatattctctccac	CRISPR spacer
gtcagggttgataccatacgcaccaagatattctctccac	Protospacer
****************************************

99. spacer 3.8|452358|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ataatttggggggtaagctgcgccagcagcaacatacggtg	CRISPR spacer
ataatttggggggtaagctgcgccagcagcaacatacggtg	Protospacer
*****************************************

100. spacer 3.8|452358|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ataatttggggggtaagctgcgccagcagcaacatacggtg	CRISPR spacer
ataatttggggggtaagctgcgccagcagcaacatacggtg	Protospacer
*****************************************

101. spacer 3.9|452435|49|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tcacttgtattcctgttgagaaatataaggaagctgctcaaaatgtgag	CRISPR spacer
tcacttgtattcctgttgagaaatataaggaagctgctcaaaatgtgag	Protospacer
*************************************************

102. spacer 3.9|452435|49|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tcacttgtattcctgttgagaaatataaggaagctgctcaaaatgtgag	CRISPR spacer
tcacttgtattcctgttgagaaatataaggaagctgctcaaaatgtgag	Protospacer
*************************************************

103. spacer 3.10|452520|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

acacgatcgcccctcttctctgtcaatccctcataatacgc	CRISPR spacer
acacgatcgcccctcttctctgtcaatccctcataatacgc	Protospacer
*****************************************

104. spacer 3.10|452520|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

acacgatcgcccctcttctctgtcaatccctcataatacgc	CRISPR spacer
acacgatcgcccctcttctctgtcaatccctcataatacgc	Protospacer
*****************************************

105. spacer 3.11|452597|46|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tttccacctctttacgagaggagccaatcaaagcttcgatttctga	CRISPR spacer
tttccacctctttacgagaggagccaatcaaagcttcgatttctga	Protospacer
**********************************************

106. spacer 3.11|452597|46|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tttccacctctttacgagaggagccaatcaaagcttcgatttctga	CRISPR spacer
tttccacctctttacgagaggagccaatcaaagcttcgatttctga	Protospacer
**********************************************

107. spacer 3.12|452679|40|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ttgctgtatacatggatctctagcgtttttcttgtggtac	CRISPR spacer
ttgctgtatacatggatctctagcgtttttcttgtggtac	Protospacer
****************************************

108. spacer 3.12|452679|40|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ttgctgtatacatggatctctagcgtttttcttgtggtac	CRISPR spacer
ttgctgtatacatggatctctagcgtttttcttgtggtac	Protospacer
****************************************

109. spacer 3.13|452755|46|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gcacagacacttacctccggggacaatcccgtagtgatcgcagtgg	CRISPR spacer
gcacagacacttacctccggggacaatcccgtagtgatcgcagtgg	Protospacer
**********************************************

110. spacer 3.13|452755|46|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

gcacagacacttacctccggggacaatcccgtagtgatcgcagtgg	CRISPR spacer
gcacagacacttacctccggggacaatcccgtagtgatcgcagtgg	Protospacer
**********************************************

111. spacer 3.14|452837|43|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tttaactggttacgcatgagcgtaagatgttggatgtcttccg	CRISPR spacer
tttaactggttacgcatgagcgtaagatgttggatgtcttccg	Protospacer
*******************************************

112. spacer 3.14|452837|43|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tttaactggttacgcatgagcgtaagatgttggatgtcttccg	CRISPR spacer
tttaactggttacgcatgagcgtaagatgttggatgtcttccg	Protospacer
*******************************************

113. spacer 3.15|452916|39|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cttcaatcaacatccgggtggcttctaatcgttgctcaa	CRISPR spacer
cttcaatcaacatccgggtggcttctaatcgttgctcaa	Protospacer
***************************************

114. spacer 3.15|452916|39|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

cttcaatcaacatccgggtggcttctaatcgttgctcaa	CRISPR spacer
cttcaatcaacatccgggtggcttctaatcgttgctcaa	Protospacer
***************************************

115. spacer 3.16|452991|52|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ttgaataatttgctgaataaactgagatttttgatgagctgtccaattgcaa	CRISPR spacer
ttgaataatttgctgaataaactgagatttttgatgagctgtccaattgcaa	Protospacer
****************************************************

116. spacer 3.16|452991|52|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ttgaataatttgctgaataaactgagatttttgatgagctgtccaattgcaa	CRISPR spacer
ttgaataatttgctgaataaactgagatttttgatgagctgtccaattgcaa	Protospacer
****************************************************

117. spacer 3.17|453079|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

ccctacccaaacaagtcatcaagtccgccaagatttctgtt	CRISPR spacer
ccctacccaaacaagtcatcaagtccgccaagatttctgtt	Protospacer
*****************************************

118. spacer 3.17|453079|41|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ccctacccaaacaagtcatcaagtccgccaagatttctgtt	CRISPR spacer
ccctacccaaacaagtcatcaagtccgccaagatttctgtt	Protospacer
*****************************************

119. spacer 3.18|453156|39|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

catcgatcgtgcgtcgaatcgtcggatgattacgaaatt	CRISPR spacer
catcgatcgtgcgtcgaatcgtcggatgattacgaaatt	Protospacer
***************************************

120. spacer 3.18|453156|39|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

catcgatcgtgcgtcgaatcgtcggatgattacgaaatt	CRISPR spacer
catcgatcgtgcgtcgaatcgtcggatgattacgaaatt	Protospacer
***************************************

121. spacer 3.19|453231|46|NZ_AP014644|CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

actcgaccataattcttgaagcaactttcctagcctcttgactcag	CRISPR spacer
actcgaccataattcttgaagcaactttcctagcctcttgactcag	Protospacer
**********************************************

122. spacer 3.19|453231|46|NZ_AP014644|CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

actcgaccataattcttgaagcaactttcctagcctcttgactcag	CRISPR spacer
actcgaccataattcttgaagcaactttcctagcctcttgactcag	Protospacer
**********************************************

123. spacer 4.1|453754|33|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

cttccagttgcgccacggtcgcgattgcatcaa	CRISPR spacer
cttccagttgcgccacggtcgcgattgcatcaa	Protospacer
*********************************

124. spacer 4.1|453754|33|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cttccagttgcgccacggtcgcgattgcatcaa	CRISPR spacer
cttccagttgcgccacggtcgcgattgcatcaa	Protospacer
*********************************

125. spacer 4.2|453823|35|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

tcattgcacctttaataggcaagccaaatgcactt	CRISPR spacer
tcattgcacctttaataggcaagccaaatgcactt	Protospacer
***********************************

126. spacer 4.2|453823|35|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tcattgcacctttaataggcaagccaaatgcactt	CRISPR spacer
tcattgcacctttaataggcaagccaaatgcactt	Protospacer
***********************************

127. spacer 4.3|453894|36|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

atacgccattttccattagcagggttataggttcga	CRISPR spacer
atacgccattttccattagcagggttataggttcga	Protospacer
************************************

128. spacer 4.3|453894|36|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

atacgccattttccattagcagggttataggttcga	CRISPR spacer
atacgccattttccattagcagggttataggttcga	Protospacer
************************************

129. spacer 4.4|453966|37|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

gatgttgattccttctcccgaattagggtcggtaatg	CRISPR spacer
gatgttgattccttctcccgaattagggtcggtaatg	Protospacer
*************************************

130. spacer 4.4|453966|37|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gatgttgattccttctcccgaattagggtcggtaatg	CRISPR spacer
gatgttgattccttctcccgaattagggtcggtaatg	Protospacer
*************************************

131. spacer 4.5|454039|42|NZ_AP014644|PILER-CR,CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 0, identity: 1.0

cgcagtgccctcaatgatatccatcagtggatccgcgatatc	CRISPR spacer
cgcagtgccctcaatgatatccatcagtggatccgcgatatc	Protospacer
******************************************

132. spacer 4.5|454039|42|NZ_AP014644|PILER-CR,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cgcagtgccctcaatgatatccatcagtggatccgcgatatc	CRISPR spacer
cgcagtgccctcaatgatatccatcagtggatccgcgatatc	Protospacer
******************************************

133. spacer 2.18|447855|38|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NC_008367 (Phormidium phage Pf-WMP4, complete genome) position: , mismatch: 1, identity: 0.974

ccacccacacggggggacgggcgctccacctatatgta	CRISPR spacer
ccacccacacggggggacgggcgcgccacctatatgta	Protospacer
************************ *************

134. spacer 2.18|447855|38|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to DQ875742 (Cyanophage Pf-WMP4, complete genome) position: , mismatch: 1, identity: 0.974

ccacccacacggggggacgggcgctccacctatatgta	CRISPR spacer
ccacccacacggggggacgggcgcgccacctatatgta	Protospacer
************************ *************

135. spacer 2.18|447855|38|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to NC_008367 (Phormidium phage Pf-WMP4, complete genome) position: , mismatch: 4, identity: 0.895

ccacccacacggggggacgggcgctccacctatatgta	CRISPR spacer
ccacccacacggggggacgggcgcgccacctatat---	Protospacer
************************ **********

136. spacer 2.18|447855|38|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to DQ875742 (Cyanophage Pf-WMP4, complete genome) position: , mismatch: 4, identity: 0.895

ccacccacacggggggacgggcgctccacctatatgta	CRISPR spacer
ccacccacacggggggacgggcgcgccacctatat---	Protospacer
************************ **********

137. spacer 2.39|449445|35|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to MN692960 (Marine virus AFVG_117M7, complete genome) position: , mismatch: 8, identity: 0.771

ctgtatcttttctagcttgatctaatttctttgat	CRISPR spacer
ctatttcttttctagcttgatctaataattcttgt	Protospacer
**.* *********************  .*.* .*

138. spacer 2.39|449445|35|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to MN692988 (Marine virus AFVG_117M76, complete genome) position: , mismatch: 8, identity: 0.771

ctgtatcttttctagcttgatctaatttctttgat	CRISPR spacer
ctatttcttttctagcttgatctaataattcttgt	Protospacer
**.* *********************  .*.* .*

139. spacer 2.39|449445|35|NZ_AP014644|CRISPRCasFinder,CRT,PILER-CR matches to MN692984 (Marine virus AFVG_117M10, complete genome) position: , mismatch: 8, identity: 0.771

ctgtatcttttctagcttgatctaatttctttgat	CRISPR spacer
ctatttcttttctagcttgatctaataattcttgt	Protospacer
**.* *********************  .*.* .*

140. spacer 4.1|453754|33|NZ_AP014644|PILER-CR,CRISPRCasFinder,CRT matches to MF141539 (Mycobacterium phage MyraDee, complete genome) position: , mismatch: 8, identity: 0.758

cttccagttgcgccacggtcgcgattgcatcaa	CRISPR spacer
gagccagttgcgccacgatggcgattgcagccg	Protospacer
   **************.* ********* * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

221007 : 296952

Tupanvirus(50.0%)

transposase,integrase

attL 213437:213454|attR 239850:239867

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
213437:213454	attL	NA	NA	NA	NA
WP_172410514.1\|221007_221565_+\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_036047116.1\|221714_223229_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	8.0e-100	41.4
WP_017291710.1\|223244_224006_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	2.3e-47	44.6
WP_026149073.1\|224243_225890_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_071596260.1\|226158_226410_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_148664762.1\|226561_228751_-	TonB-dependent receptor	NA	NA	NA	NA
WP_017291705.1\|229348_231490_-	acylase	NA	NA	NA	NA
WP_017291704.1\|231524_232280_-	thioesterase	NA	NA	NA	NA
WP_017291703.1\|232301_236282_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	2.6e-89	26.1
WP_017291702.1\|236265_241959_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	2.4e-117	28.9
239850:239867	attR	NA	NA	NA	NA
WP_017291701.1\|241951_245221_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	3.5e-84	25.3
WP_017291700.1\|245231_246293_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_144056443.1\|246300_248118_-	hypothetical protein	A0A2K9L3I8	Tupanvirus	9.4e-31	23.7
WP_017291698.1\|251783_259607_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	6.8e-203	30.1
WP_017291697.1\|259613_264380_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	5.8e-72	26.7
WP_017291696.1\|264425_269213_-	type I polyketide synthase	D0R7J2	Paenibacillus_phage	3.7e-58	41.8
WP_144056442.1\|269217_274560_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	1.0e-104	24.4
WP_017291694.1\|274965_276273_+	MFS transporter	NA	NA	NA	NA
WP_017291693.1\|276284_277244_-	sucrase ferredoxin	NA	NA	NA	NA
WP_071596259.1\|277261_278305_-	iron-siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_017291691.1\|279030_279561_+	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_172410515.1\|279924_280170_+	DUF1636 family protein	NA	NA	NA	NA
WP_017291690.1\|280262_281294_-	iron ABC transporter permease	NA	NA	NA	NA
WP_017291689.1\|281290_282310_-	iron ABC transporter permease	NA	NA	NA	NA
WP_017291688.1\|282574_283222_+	ATP-binding cassette domain-containing protein	F2Y1V6	Organic_Lake_phycodnavirus	3.4e-07	25.8
WP_017291687.1\|283218_284022_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_081614821.1\|287451_289500_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	8.8e-09	33.6
WP_017291682.1\|289583_290018_-\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	8.0e-13	31.6
WP_172410516.1\|293221_294508_+	response regulator	A0A1V0SGX0	Hokovirus	3.2e-33	29.4
WP_017291676.1\|296052_296952_+\|transposase	transposase family protein	NA	NA	NA	NA

DBSCAN-SWA_2

358089 : 415247

Lactococcus_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017291634.1\|358089_358914_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_096735604.1\|358931_360060_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.3e-25	32.6
WP_017291631.1\|360175_360640_+	hypothetical protein	NA	NA	NA	NA
WP_017291630.1\|360908_361508_+	hypothetical protein	NA	NA	NA	NA
WP_017291629.1\|361500_362151_+	hypothetical protein	NA	NA	NA	NA
WP_017291628.1\|362141_362603_-	hypothetical protein	NA	NA	NA	NA
WP_017291627.1\|362655_362853_+	hypothetical protein	NA	NA	NA	NA
WP_144056419.1\|364247_364835_+	hypothetical protein	NA	NA	NA	NA
WP_017291625.1\|364831_365734_-	ParB/RepB/Spo0J family partition protein	S5VSZ7	Leptospira_phage	1.4e-06	39.0
WP_017291624.1\|365916_366324_-	hypothetical protein	NA	NA	NA	NA
WP_144056441.1\|366709_367510_+	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	2.3e-05	28.2
WP_017291622.1\|367478_368669_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_017291621.1\|368992_369214_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_017291620.1\|369261_370467_-	hypothetical protein	NA	NA	NA	NA
WP_017291619.1\|371164_372019_+	ParA family protein	F0PIG8	Enterococcus_phage	4.8e-09	24.7
WP_017291618.1\|372011_372527_+	hypothetical protein	NA	NA	NA	NA
WP_026148520.1\|372615_373527_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_017291617.1\|373690_374179_+	hypothetical protein	NA	NA	NA	NA
WP_017291616.1\|374204_375026_+	DNA repair protein RadC	NA	NA	NA	NA
WP_144056418.1\|375267_376020_+	N-6 DNA methylase	A0A2K9V411	Faecalibacterium_phage	1.4e-09	31.2
WP_017291614.1\|376313_377504_-	hypothetical protein	NA	NA	NA	NA
WP_017291613.1\|377510_378134_-	hypothetical protein	NA	NA	NA	NA
WP_017291612.1\|378123_378486_-	hypothetical protein	NA	NA	NA	NA
WP_017291611.1\|378565_380476_-	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA
WP_017291610.1\|380546_380942_-	hypothetical protein	NA	NA	NA	NA
WP_017291609.1\|381052_381556_-	hypothetical protein	NA	NA	NA	NA
WP_017291608.1\|381539_382343_-	hypothetical protein	NA	NA	NA	NA
WP_017291607.1\|382414_382990_-	hypothetical protein	NA	NA	NA	NA
WP_144056417.1\|384197_385316_-	hypothetical protein	NA	NA	NA	NA
WP_144056416.1\|385957_386635_+	hypothetical protein	NA	NA	NA	NA
WP_017291602.1\|386658_389085_-	relaxase domain-containing protein	NA	NA	NA	NA
WP_017291600.1\|389950_390487_-	hypothetical protein	NA	NA	NA	NA
WP_144056415.1\|391108_391327_+	hypothetical protein	NA	NA	NA	NA
WP_017291598.1\|391407_391551_+	hypothetical protein	NA	NA	NA	NA
WP_081614818.1\|392826_393546_+	DNA repair protein RadC	A0A1B2LRS6	Wolbachia_phage	3.9e-12	29.9
WP_017291595.1\|393664_394066_+	hypothetical protein	NA	NA	NA	NA
WP_017291594.1\|394234_394597_+	hypothetical protein	NA	NA	NA	NA
WP_154660847.1\|394865_395018_-	hypothetical protein	NA	NA	NA	NA
WP_017291592.1\|395193_396363_+	hypothetical protein	NA	NA	NA	NA
WP_017291590.1\|396505_397696_+	glutathionylspermidine synthase family protein	NA	NA	NA	NA
WP_144056414.1\|397775_398003_-	hypothetical protein	NA	NA	NA	NA
WP_144056413.1\|398282_398468_+	hypothetical protein	NA	NA	NA	NA
WP_017291588.1\|398421_399537_+	DUF1016 family protein	Q9JMP5	Wolbachia_phage	1.6e-105	55.5
WP_026149061.1\|400471_400897_+	hypothetical protein	NA	NA	NA	NA
WP_144056440.1\|401220_402444_-	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
WP_154660846.1\|402622_402793_+	hypothetical protein	NA	NA	NA	NA
WP_071596254.1\|403850_404120_-	hypothetical protein	NA	NA	NA	NA
WP_017285525.1\|404232_405375_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_017291582.1\|405478_405634_-	hypothetical protein	NA	NA	NA	NA
WP_017291580.1\|406110_408351_-	ATP-binding domain-containing protein	NA	NA	NA	NA
WP_144056412.1\|408628_409012_-	hypothetical protein	NA	NA	NA	NA
WP_172410481.1\|409846_410521_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	2.8e-28	36.8
WP_172410480.1\|410414_412145_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_144056281.1\|412912_413725_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	3.8e-32	34.1
WP_017291576.1\|413825_415247_-\|transposase	IS21 family transposase	A0A059NT83	Lactococcus_phage	4.3e-31	31.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP014642

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_AP014644

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection