CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP021169	Bacillus subtilis strain TLO3 chromosome, complete genome	3 crisprs	csa3,DEDDh,WYL,DinG,cas3	0	1	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021169_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021169_1

767636-767738

Orphan

Consensus_repeat	Method
GAGGGGGCTCCTCTCCTTTTCATTTCGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021169_1

>merge|NZ_CP021169|1|767636-767738|CRISPRCasFinder
GAGGGGGCTCCTCTCCTTTTCATTTCGCCCKAATTTAGGAAATACAAAAGGTAAGCTGGCATACAAAAAAGGRGAGGGGGCTCCTCTCCTTTTCATTTCGCCC

>NZ_CP021169|1|1|767636-767738|CRISPRCasFinder
GAGGGGGCTCCTCTCCTTTTCATTTCGCCC	KAATTTAGGAAATACAAAAGGTAAGCTGGCATACAAAAAAGGR
GAGGGGGCTCCTCTCCTTTTCATTTCGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021169.1\|WP_003243426.1\|760290_760737_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371246
NZ_CP021169.1\|WP_029946126.1\|778053_779013_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|225722
NZ_CP021169.1\|WP_015383080.1\|774207_775644_+\|anion-permease	unknown	unknown	gnl\|CDD\|279307
NZ_CP021169.1\|WP_014476107.1\|760861_761284_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133401
NZ_CP021169.1\|WP_003233729.1\|772280_772628_+\|general-stress-protein	unknown	unknown	gnl\|CDD\|378584
NZ_CP021169.1\|WP_014476110.1\|763105_764662_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP021169.1\|WP_015252583.1\|761349_762540_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341027
NZ_CP021169.1\|WP_086343565.1\|768540_769542_-\|Fe(3+)-citrate-ABC-transporter-permease-YfmE	unknown	unknown	gnl\|CDD\|182071
NZ_CP021169.1\|WP_086343568.1\|777370_778051_+\|two-component-response-regulator-CitT	unknown	unknown	gnl\|CDD\|226931
NZ_CP021169.1\|WP_003244025.1\|772818_774081_+\|pectate-lyase	unknown	unknown	gnl\|CDD\|226384
NZ_CP021169.1\|WP_086343563.1\|766530_767550_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225041
NZ_CP021169.1\|WP_086343561.1\|762831_762987_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021169.1\|WP_003233730.1\|771669_772038_-\|YfmB-family-protein	unknown	unknown	gnl\|CDD\|288356
NZ_CP021169.1\|WP_042978063.1\|766035_766482_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP021169.1\|WP_042978069.1\|770612_771560_-\|Fe(3+)-citrate-ABC-transporter-substrate-binding-protein-YfmC	unknown	unknown	gnl\|CDD\|226959
NZ_CP021169.1\|WP_086343560.1\|758278_760168_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP021169.1\|WP_086343567.1\|775770_777399_+\|two-component-sensor-histidine-kinase-CitS	unknown	unknown	gnl\|CDD\|225827
NZ_CP021169.1\|WP_003233767.1\|757284_758145_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|206779
NZ_CP021169.1\|WP_086343566.1\|769538_770540_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP021169.1\|WP_086343562.1\|764834_765965_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587

Protein	Function_ID	Function_description	E-value
NZ_CP021169.1\|WP_003243426.1\|760290_760737_+\|hypothetical-protein	gnl\|CDD\|371246	pfam10787, YfmQ, Uncharacterized protein from bacillus cereus group. This family is conserved in the Bacillus cereus group. Several members are called YfmQ but the function is not known.	4.24908e-87
NZ_CP021169.1\|WP_029946126.1\|778053_779013_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|225722	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown].	1.47768e-104
NZ_CP021169.1\|WP_015383080.1\|774207_775644_+\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
NZ_CP021169.1\|WP_014476107.1\|760861_761284_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133401	cd04774, HTH_YfmP, Helix-Turn-Helix DNA binding domain of the YfmP transcription regulator. Helix-turn-helix (HTH) transcription regulator, YfmP, and related proteins; N-terminal domain. YfmP regulates the multidrug efflux protein, YfmO, and indirectly regulates the expression of the Bacillus subtilis copZA operon encoding a metallochaperone, CopZ, and a CPx-type ATPase efflux protein, CopA. These proteins belong to the MerR superfamily of transcription regulators that promote expression of several stress regulon genes by reconfiguring the spacer between the -35 and -10 promoter elements. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	1.38619e-37
NZ_CP021169.1\|WP_003233729.1\|772280_772628_+\|general-stress-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	1.80205e-35
NZ_CP021169.1\|WP_014476110.1\|763105_764662_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_CP021169.1\|WP_015252583.1\|761349_762540_+\|MFS-transporter	gnl\|CDD\|341027	cd17474, MFS_YfmO_like, Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily. This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.43314e-96
NZ_CP021169.1\|WP_086343565.1\|768540_769542_-\|Fe(3+)-citrate-ABC-transporter-permease-YfmE	gnl\|CDD\|182071	PRK09777, fecD, Fe(3+) dicitrate ABC transporter permease subunit FecD.	4.1447e-95
NZ_CP021169.1\|WP_086343568.1\|777370_778051_+\|two-component-response-regulator-CitT	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	2.24034e-104
NZ_CP021169.1\|WP_003244025.1\|772818_774081_+\|pectate-lyase	gnl\|CDD\|226384	COG3866, PelB, Pectate lyase [Carbohydrate transport and metabolism].	1.84178e-114
NZ_CP021169.1\|WP_086343563.1\|766530_767550_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|225041	COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only].	0
NZ_CP021169.1\|WP_003233730.1\|771669_772038_-\|YfmB-family-protein	gnl\|CDD\|288356	pfam11486, DUF3212, Protein of unknown function (DUF3212). Members in this family of proteins are annotated as YfmB however currently no function for this protein is known.	1.73216e-72
NZ_CP021169.1\|WP_042978063.1\|766035_766482_+\|N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	6.02957e-33
NZ_CP021169.1\|WP_042978069.1\|770612_771560_-\|Fe(3+)-citrate-ABC-transporter-substrate-binding-protein-YfmC	gnl\|CDD\|226959	COG4594, FecB, ABC-type Fe3+-citrate transport system, periplasmic component [Inorganic ion transport and metabolism].	3.00956e-152
NZ_CP021169.1\|WP_086343560.1\|758278_760168_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_CP021169.1\|WP_086343567.1\|775770_777399_+\|two-component-sensor-histidine-kinase-CitS	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	0
NZ_CP021169.1\|WP_003233767.1\|757284_758145_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|206779	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain. Methyl-accepting chemotaxis proteins (MCPs or chemotaxis receptors) are an integral part of the transmembrane protein complex that controls bacterial chemotaxis, together with the histidine kinase CheA, the receptor-coupling protein CheW, receptor-modification enzymes, and localized phosphatases. MCPs contain a four helix trans membrane region, an N-terminal periplasmic ligand binding domain, and a C-terminal HAMP domain followed by a cytoplasmic signaling domain. This C-terminal signaling domain dimerizes into a four-helix bundle and interacts with CheA through the adaptor protein CheW.	1.0865e-28
NZ_CP021169.1\|WP_086343566.1\|769538_770540_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	1.58553e-87
NZ_CP021169.1\|WP_086343562.1\|764834_765965_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	3.47721e-112

>NZ_CP021169.1|WP_086343563.1|766530_767550_-|NADP-dependent-oxidoreductase
MTASQQQIQLARRPQGIPVHEDFRFETIPVPEPKQGEVLVKTLYVSVDPYMRGRMQDTKSYVEPFALDEALSGGVIAEVVSDGNNLKKGDIVIGNLSWQEFSAVSESALRKIDTSLAPASAYLGILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSDEKIDYLKQELQFDEAINYKTAGDIQKALQDACPDGVDVYFDNVGGPISDAVMNLLNEFARIPVCGAISSYNAESEADDMGPRVQSKLIKTKSLMQGFIVSDYSDRFSEGAKQLAQWLKAGKLHYEETITEGFENIPDAFLGLFKGENKGKQLIKVSDPS
>NZ_CP021169.1|WP_042978063.1|766035_766482_+|N-acetyltransferase
MVSIDRFQAVKESELKILEHWFENEDTRRRMDGMLPLDEWYARVNKDKHNTVIMAYDGQLPAGMVVIEFGEERTYIGLIVNPLYRLQGYGKGILQKLMTEPDFTRVREWVACIEEDNRISLACFQAAGFTLEDTEPDEDGFLTLILRS
>NZ_CP021169.1|WP_086343562.1|764834_765965_+|DEAD/DEAH-box-helicase
MTQTWPFLHNAQSFIQENWNASGFQTPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAKKLKMHEVKTIVLDEADQLILPEHRETIKQIIKTTLRDRQLLCFSATLKKETEDVLRELAQEPEVLKVQRSRAEAGKVKHQYLICDQRDKVKLLQKLSRLEGMQALVFVRDIGNLSVYAEKLAYHHVELGVLHSEAKKMERAKIISAFEDGEFPLLLATDIAARGLDIENLPYVIHADIPDEDGYVHRSGRTGRAGKEGNVLSLVTKLEESKLKKMAKKLGVELSEAVYAGGKLKTK
>NZ_CP021169.1|WP_014476110.1|763105_764662_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSILSVKDLSHGFGDRAIFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWSKNVRVGYLDQHTVLEKGKSIRDVLKDAFHYLFAMEEEMNEIYNKMGEADPDELEKLLEEVGVIQDALTNNDFYVIDSKVEEIARGLGLSDIGLERDVTDLSGGQRTKVLLAKLLLEKPEILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRYVGDYHQFMEVYEVKKQQLEAAYKKQQQEVAELKDFVARNKARVSTRNMAMSRQKKLDKMDMIELAAEKPKPEFHFKPARTSGKLIFETKDLVIGYDSPLSRPLNLRMERGQKIALYGANGIGKTTLLKSLLGEIQPLEGSVERGEHIYTGYFEQEVKETNNNTCIEEVWSEFPSYTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDVDAKEELKRALKEYKGSILLISHEPDFYMDIATETWNCESWTTKVL
>NZ_CP021169.1|WP_086343561.1|762831_762987_+|hypothetical-protein
MDKAKPDEYDHKCLETLYQYIHSVMKNSFSRSSGLPLGQMRRILSCLPKES
>NZ_CP021169.1|WP_015252583.1|761349_762540_+|MFS-transporter
MDKTKQVNQKTGLLSQPKAVWAVAFACVISFMGIGLVDPILPAIAAQLHASPSEVSLLFTSYLLVTGFMMFFSGAISSRIGAKWTLILGLIFIIVFAGLGGSSSSIAQLVGYRGGWGLGNALFISTALAVIVGVSVGGSAQAIILYEAALGLGISVGPLAGGELGSISWRAPFFGVSVLMFIALIAISFMLPKLPKPAKRVGVFDAMKALKYKGLLTMAVSAFLYNFGFFILLAYSPFVLDLDEHGLGYVFFGWGLLLAITSVFTAPLVHKALGTVRSLVVLFIAFAAILVIMGIWTDHQTLIITCIVVAGAVLGMVNTIMTTAVMGSAPVERSIASSAYSSVRFIGGALAPWIAGMLSEHFTASTPYTVGGIVVFVGMLVLLMGRKHLAGIKAGH
>NZ_CP021169.1|WP_014476107.1|760861_761284_+|MerR-family-transcriptional-regulator
MEWMKIDQVAKRSGLTKRTIRFYEEIGLIPAPKRTDGGVRLYSEDDMEELEKVISTKEVLGFSLQELQHFMETSRQLELNKEGYLLSLDPKERKEKLEEIQETLNHQLDLIDEKIRTFQSFKERLQGMKNKAERAIQSIE
>NZ_CP021169.1|WP_003243426.1|760290_760737_+|hypothetical-protein
MTWAIVMLILMSLVKIVLTCLPTGVIEWLLGKFEVHAKLSDENASLSLDGKRLEGAEKQKVIDQFNEAIFLEKYYIYPGDEERYLHPENGGTPLVIDTKKGKKDVKLFVYRYDDHIDVVKQYKKKVIAYRVLSESLQKESLSVAGSLA
>NZ_CP021169.1|WP_086343560.1|758278_760168_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSILKAENLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSTLLKVISGLESIEEGEITKSGSVQVEFLHQDPELPAGQTVLEHIYSGESAVMKTLREYEKALYELGKDPENEQRQKHLLAAQAKMDANNAWDANTLAKTVLSKLGVKDVTKPVNELSGGQKKRVAIAKNLIQPADLLILDEPTNHLDNETIEWLEGYLSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYEVFLEKRAEREAQAEQKETKRQNLLRRELAWLRRGAKARSTKQKARIDRVETLKEQKGPQSSGSLDFAIGSHRLGKQVIEAENVMIAYDGRMLVDRFNELVIPGERIGIIGPNGIGKTTLLNALAGRHTPDGGDITIGQTVRIGYYTQDHSEMNGELKVIDYIKETAEVVKTADGDMITAEQMLERFLFPRSMQQTYIRKLSGGEKRRLYLLQVLMQEPNVLFLDEPTNDLDTETLSVLEDYIDQFPGVVITVSHDRYFLDRVVDRLIVFEGNGVISRFQGSYSDYMEESKAKKAAPKPAAEEKSAEAEPKKKRKKLSYKDQLEWDGIEDKIAQLEEKHEQLEADIAAAGSDFGKIQELMAEQAKTAEELEAAMDRWTELSLMIEELES
>NZ_CP021169.1|WP_003233767.1|757284_758145_+|methyl-accepting-chemotaxis-protein
MELTINTEKETADILDAFIKVAPYLNSLVQDDITIGIYDTEKLLVNIPAKTFSLNVKAGDPLQEGDIITDAIRSNQKKTSMVPKELFGFPLIARAIPLHDENGRVIGGVGLGTSLEESSKLHDVAESLSAVVEQTAAAISDISESINGFSTQMSGISSQAKKVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQHTDGQAAAVEQISATMQEISGSAQHLAKMAEKALEEE
>NZ_CP021169.1|WP_086343565.1|768540_769542_-|Fe(3+)-citrate-ABC-transporter-permease-YfmE
MKKTTRKQKRPLLAILILAVILIVLSVISIGIGALYISPDAVVTNLLGLDHSFEFITQQYRLPRIILAILAGAGLAAAGAILQGVIRNPLASPDVVGISKGSGLAAMAVILIFPESPVYVLPFSAFAGAAIIAVLLLMIARKKSIQPSSLALSGIALGAVCHAGMQYMMVKFPGDVNAALIWLTGSLWGRNWEEVKLLAPWLLILFPIVCILIPKLDLMSLGDELAQGLGENANRLRFILIFTAVALAGSCVAVVGSIGFIGLLAPHIARRLTGEKAKYLLPASALIGAIILLIADTLGRGIMPPVEIPAGILTAVIGAPYFLYLLKFEARKQ
>NZ_CP021169.1|WP_086343566.1|769538_770540_-|iron-ABC-transporter-permease
MYHSAKRRSSSRLMMFIIALIIFIFGLGLNLSVGASDIGIIDSLKYLFVWDGSKEQLIISTLRLPRTLIGVFVGASLAVAGALMQAMTRNPLASPQIFGVNAGASLFVVASLVILPASPYSSVIFAFAGAAAGGAIVYMIASSGGMTPVKLALSGMAVHLFLSSMTQAIIILNESGEDVLYWMTGAIDGSNWQDVITIAPFSVIGIGLALIFSGSVSVLGLGDETAKGLGQNMNGIRILISLIILILSGASVAVAGPIGFVGLLVPHIVRKLIGEHYQYVLPFSALFGAILLVYADVLARWIAFPYESPVGIVTAIIGTPFFLYLARKGRHLK
>NZ_CP021169.1|WP_042978069.1|770612_771560_-|Fe(3+)-citrate-ABC-transporter-substrate-binding-protein-YfmC
MRTYSNKLIAIMSVLLLACLIVSGCSSSQNNNGSGESKSKDSRVIHDEEGKTTVSGTPKRVVVLELSFLDAVHNLGITPVGIADDNKKDMIKKLVGSSIDYTSVGTRSEPNLEVISSLKPDLIIADAERHKNIYKQLKKIAPTIELKSREATYDETIDSFTTIAKALNKEDEGKEKLAEHKKVINDLKAELPKDENRNIVLGVARADSFQLHTSSSYDGEIFKMLGFTHAVKSDNAYQEVSLEQLSKIDPDILFISANEGKTIVDEWKTNPLWKNLKAVKNGQVYDADRDTWTRFRGIKSSETSAKDVLKKVYNK
>NZ_CP021169.1|WP_003233730.1|771669_772038_-|YfmB-family-protein
MQYFSPEQQYNAWIVSDLVKQIFHKRAGCSPGIHELAVFAEEHFHIDIDFVFSIIMNIGDIEFALTDEIEKKLSGYLSTLLPYVTADMFETSKANAHAFLSRRHGNAAYHLFVSDDAFMRKQ
>NZ_CP021169.1|WP_003233729.1|772280_772628_+|general-stress-protein
MKPVVKEYTNDEQLMKDVEELQKMGVAKEDVYVLAHDDDRTERLADNTNANTIGAKETGFKHAVGNIFNKKGDELRNKIHEIGFSEDEAAQFEKRLDEGKVLLFVTDNEKVKAWA
>NZ_CP021169.1|WP_003244025.1|772818_774081_+|pectate-lyase
MKKVMLATALFLGLTPAGANAADLGHQTLGSNDGWGAYSTGTTGGSKASSSNVYTVSNRNQLVSALGKETNTTPKIIYIKGTIDMNVDDNLKPLGLNDYKDPEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIKSDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQRAPRVRFGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVPGLSAAKTISVFSGGTALYDSGTLLNGTQINASAANGLSSSVGWTPSLHGSIDASANVKSNVINQAGAGKLN
>NZ_CP021169.1|WP_015383080.1|774207_775644_+|anion-permease
MASEKDAGKQSAVKLVPLLITVAVGLIIWFIPAPSGLEPKAWHLFAIFVATIIGFISKPLPMGAIAIFALAVTALTGTLSIEDTLSGFGNKTIWLIVIAFFISRGFIKTGLGARISYVFVQKFGKKTLGLSYSLLFSDLILSPAIPSNTARAGGIIFPIIRSLSETFGSSPANGTERKIGAFLLKTGFQGNLITSAMFLTAMAANPLIAKLAHDVAGVDLTWTSWAIAAIVPGLVSLIITPLVIYKLYPPEIKETPDAAKIATEKLKEMGPFKKSELSMVIVFLLVLVLWIFGGSFNIDATTTALIGLSVLLLSQVLTWDDIKKEQGAWDTLTWFAALVMLANFLNELGMVSWFSNAMKSSVSGFSWIVAFIILIVVYYYSHYFFASATAHISAMYSAFLAVVVAAGAPPLLAALSLAFISNLFGSTTHYGSGAAPVFFGAGYIPQGKWWSIGFILSIVHIIVWLVIGGLWWKVLGIW
>NZ_CP021169.1|WP_086343567.1|775770_777399_+|two-component-sensor-histidine-kinase-CitS
MVKKRFHFSLQTKIMGLIAALLVFVIGVLTITLAVQHTQGERRQAEQLAVQTARTISYMPPVKELIERKGGHAAQTQEVIEQMKEQTGAFAIYVLDEKGDIRSASGKSGLKKLERSREILFGGSHVSETKADGRRVIRGSAPIIKEQKGYSQVIGSVSVDFLQTETEQSIKKHLRNLSVIAVLVLLLGFIGAAVLAKSIRKDTLGLEPHEIAALYRERNAMLFAIREGIIATNREGVVTMMNVSAAEMLKLPEPVIHLPIDDVMPGAGLMSVLEQGEMLPNQEVSVNDQVFIINTKVMNQGGQAYGIVVSFREKTELKKLIDTLTEVRKYSEDLRAQTHEFSNKLYAILGLLELGEYDEAIDLIKEEYAMQNEQHDLLFHNIHSQQVQAILLGKISKASEKKVKLVIDENSSLAPLPAHIGLSHLITIIGNLIDNAFEAVAEQSVKEVLFFITDMGHDIVIEVSDTGPGVPPDKMEEVFERGYSSKGMRRGYGLANVKDSVRELGGWIELANQKTGGAVFTVFIPKEKQRGNPFDSHRDCGG
>NZ_CP021169.1|WP_086343568.1|777370_778051_+|two-component-response-regulator-CitT
MIHIAIAEDDFRVAQIHERLIKQLDGFKIIGKAANAKETLALLKGHKADLLLLDIYMPDELGTALIPEIRSRFPEVDIMIITAATETRHLQEALRAGIAHYLIKPVTADKFRQVLLQYKEKRKLLMSQPEVSQAMIDHIFGNSVKTALPAEDLPTGINSITLRKIKEALQTASEGLTAEELGEKMGASRTTARRYAEYLVSKEEARAELEYGIIGRPERKYYLAAD
>NZ_CP021169.1|WP_029946126.1|778053_779013_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKKSIILLIILLIFMQGDIRQAAAPRLPDGPIEIVVPAEPSGGWDVTAQAIQSVLRQKQIVKGDVHIVYKSGGGGEKGWKYVNKSSKQTISMTSSLILSNDLLGQSKLKMADFTPLAILSKEWQTVALPKGSALTNGKDVLNEINMHPGKVRIGFAPGFGNDDQLSFVRAADMYGIDPFDIQFSQYDSSEQLIQALIRHEIEAASMTLSEAKPYERNGDITLAAVTSDKRLPGFPNVPTWKEQGIPFVFSHWRGILGPKNMSEEEISYWDQALKKVTSSPEWKRKINEQDWESFYLNSRETKRFLEEQSAFYQSIMTGN

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Crispr_ID: NZ_CP021169_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021169_2

873140-873245

Orphan

Consensus_repeat	Method
AGAAAACAAAACCAACAATCAGCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021169_2

>merge|NZ_CP021169|2|873140-873245|CRISPRCasFinder
AGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTTGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTG

>NZ_CP021169|2|2|873140-873245|CRISPRCasFinder
AGAAAACAAAACCAACAATCAGCTG	CTGGTCAAGGTCAATTTGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTC
AGAAAACAAAACCAGCAATCAGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021169.1\|WP_003244113.1\|866011_867001_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030
NZ_CP021169.1\|WP_003242708.1\|873521_873782_+\|ygaB-like-family-protein	unknown	unknown	gnl\|CDD\|372951
NZ_CP021169.1\|WP_086343607.1\|877643_878933_-\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|183493
NZ_CP021169.1\|WP_086343609.1\|888568_889345_-\|sporulation-control-protein-Spo0M	unknown	unknown	gnl\|CDD\|226776
NZ_CP021169.1\|WP_003223262.1\|872273_873026_+\|enoyl-[acyl-carrier-protein]-reductase-FabL	unknown	unknown	gnl\|CDD\|236145
NZ_CP021169.1\|WP_003243789.1\|863582_863852_+\|YfhJ-family-protein	unknown	unknown	gnl\|CDD\|379438
NZ_CP021169.1\|WP_043857881.1\|880713_881598_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379641
NZ_CP021169.1\|WP_003223285.1\|879680_880118_+\|peroxide-responsive-transcriptional-repressor-PerR	unknown	unknown	gnl\|CDD\|223806
NZ_CP021169.1\|WP_003223272.1\|873925_874456_+\|DUF402-domain-containing-protein	unknown	unknown	gnl\|CDD\|184219
NZ_CP021169.1\|WP_014479226.1\|880152_880506_-\|YgzB-family-protein	unknown	unknown	gnl\|CDD\|371346
NZ_CP021169.1\|WP_015252513.1\|870849_871959_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|130156
NZ_CP021169.1\|WP_086343603.1\|863996_864515_+\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|214600
NZ_CP021169.1\|WP_003242803.1\|864599_864932_+\|SdpC-immunity-protein-SpdL	unknown	unknown	gnl\|CDD\|227945
NZ_CP021169.1\|WP_009966836.1\|874542_876285_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP021169.1\|WP_086343605.1\|867072_869658_+\|YfhO-family-protein	unknown	unknown	gnl\|CDD\|226888
NZ_CP021169.1\|WP_086343608.1\|879084_879558_+\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|224146
NZ_CP021169.1\|WP_014476212.1\|869650_870634_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP021169.1\|WP_014479224.1\|876361_877423_-\|aromatic-acid-exporter-family-protein	unknown	unknown	gnl\|CDD\|226614
NZ_CP021169.1\|WP_086343604.1\|864918_865779_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP021169.1\|WP_086343606.1\|871966_872191_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP021169.1\|WP_003244113.1\|866011_867001_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	2.54502e-85
NZ_CP021169.1\|WP_003223272.1\|873925_874456_+\|DUF402-domain-containing-protein	gnl\|CDD\|184219	PRK13662, PRK13662, hypothetical protein; Provisional.	7.36814e-127
NZ_CP021169.1\|WP_014479224.1\|876361_877423_-\|aromatic-acid-exporter-family-protein	gnl\|CDD\|226614	COG4129, COG4129, Predicted membrane protein [Function unknown].	2.78773e-90
NZ_CP021169.1\|WP_086343609.1\|888568_889345_-\|sporulation-control-protein-Spo0M	gnl\|CDD\|226776	COG4326, Spo0M, Sporulation control protein [General function prediction only].	7.57069e-155
NZ_CP021169.1\|WP_003223262.1\|872273_873026_+\|enoyl-[acyl-carrier-protein]-reductase-FabL	gnl\|CDD\|236145	PRK08063, PRK08063, enoyl-[acyl-carrier-protein] reductase FabL.	2.59874e-172
NZ_CP021169.1\|WP_003243789.1\|863582_863852_+\|YfhJ-family-protein	gnl\|CDD\|379438	pfam14043, WVELL, WVELL protein. This family includes the B. subtilis YfjH protein, which is functionally uncharacterized. This is not a homolog of E. coli YfjH, a synonym for IscX, which belongs to pfam04384. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length and contain a highly conserved WVELL motif.	4.98563e-41
NZ_CP021169.1\|WP_043857881.1\|880713_881598_+\|hypothetical-protein	gnl\|CDD\|379641	pfam14540, NTF-like, Nucleotidyltransferase-like. Structural comparisons with Structure 1kny indicate that this N-terminal domain resembles a nucleotidyltransferase fold.	1.2156e-58
NZ_CP021169.1\|WP_003223285.1\|879680_880118_+\|peroxide-responsive-transcriptional-repressor-PerR	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	2.19115e-56
NZ_CP021169.1\|WP_014479226.1\|880152_880506_-\|YgzB-family-protein	gnl\|CDD\|371346	pfam11023, DUF2614, Zinc-ribbon containing domain. This is a family of proteins conserved in the Bacillaceae family. Some members are annotated as being protein YgzB. The function is not known.	7.28983e-70
NZ_CP021169.1\|WP_015252513.1\|870849_871959_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|130156	TIGR01084, A/G-specific_adenine_glycosylase, A/G-specific adenine glycosylase. This equivalog model identifies mutY members of the pfam00730 superfamily (HhH-GPD: Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate). The major members of the superfamily are nth and mutY. [DNA metabolism, DNA replication, recombination, and repair].	5.32428e-157
NZ_CP021169.1\|WP_086343603.1\|863996_864515_+\|SH3-domain-containing-protein	gnl\|CDD\|214600	smart00287, SH3b, Bacterial SH3 domain homologues.	1.57375e-13
NZ_CP021169.1\|WP_003242803.1\|864599_864932_+\|SdpC-immunity-protein-SpdL	gnl\|CDD\|227945	COG5658, COG5658, Predicted integral membrane protein [Function unknown].	1.0168e-26
NZ_CP021169.1\|WP_009966836.1\|874542_876285_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP021169.1\|WP_086343605.1\|867072_869658_+\|YfhO-family-protein	gnl\|CDD\|226888	COG4485, COG4485, Predicted membrane protein [Function unknown].	0
NZ_CP021169.1\|WP_086343608.1\|879084_879558_+\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	1.08189e-85
NZ_CP021169.1\|WP_014476212.1\|869650_870634_-\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	3.46531e-44
NZ_CP021169.1\|WP_003242708.1\|873521_873782_+\|ygaB-like-family-protein	gnl\|CDD\|372951	pfam14182, YgaB, YgaB-like protein. The YgaB-like protein family includes the B. subtilis YgaB protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length.	1.32408e-26
NZ_CP021169.1\|WP_086343604.1\|864918_865779_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.87945e-37
NZ_CP021169.1\|WP_086343607.1\|877643_878933_-\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|183493	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional.	0

>NZ_CP021169.1|WP_003223262.1|872273_873026_+|enoyl-[acyl-carrier-protein]-reductase-FabL
MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLLV
>NZ_CP021169.1|WP_086343606.1|871966_872191_-|hypothetical-protein
MYVGRDMSELNIVSKKDWKNSELAYFHHAFQQIMPYLNEEGQSKYRELTQEIEARGGMKRNEADYSHGTRVSYD
>NZ_CP021169.1|WP_015252513.1|870849_871959_+|A/G-specific-adenine-glycosylase
MNVLEDKLKQKDIQQFRDDLISWFEREQRVLPWREDQDPYKVWVSEVMLQQTRVETVIPYFLRFVEQFPTVEALADADEEKVLKAWEGLGYYSRVRNLQSAVKEVKQEYGGIVPPDEKDFGGLKGVGPYTKGAVLSIAYNKPIPAVDGNVMRVMSRILSIWDDIAKPKTRTIFEDAIRAFISKEKPSEFNQGLMELGALICTPKSPSCLLCPVQQHCSAFEEGTERELPVKSKKKKPGIKTMAAIVLTDEDGQVYIHKRPSKGLLANLWEFPNLETQKGIKTEREQLIAFLENEYGIQADISDLQGVVEHVFTHLVWNISVFFGKVKQVSDTSELKKVTKEELEQFAFPVSHQKIWKMAVEAAAISAAP
>NZ_CP021169.1|WP_014476212.1|869650_870634_-|metal-dependent-hydrolase
MDTGTHVVMGIALGGIATLDPVVGSDPAMAHAVMIATLAGSQAPDIDTVLKLKNNAVYIRNHRGFTHSIPAVLFWSVIIPAILYLFYPQADFLHLWLWTLLAVVLHVFVDIFNAYGTQAIRPFSKKWVALGLINTFDPFIFISHLAAIAIWYAGGSPGITFLSLYIILAGYYLVRLIMQLRIKRKLHEMIHDEIESIIISPTMKFRQWRIAVTTAHAFYVGRSMEGHVVILDTFNRVPVPETDVMHAAKQDDNIAAFLSFSPVYRWEVDTFKDHYEVRFIDLRYRSKGHYPFVAIVHIGHDLTIRSSYTGWIFSEEKLQKKLKLGSI
>NZ_CP021169.1|WP_086343605.1|867072_869658_+|YfhO-family-protein
MKRKHIMIYAASLLVSVLAHAFFVKEWAEGRYMTGPGDGLAQMIVFKKLLFDQYTHGNFFYNYSFGLGGGTFSQLGYYFSASFLFLAVSAAVWLLQAVQLIGEADTLFWAESAVFISIFKLSLIIFTSASVFHYLLKHRAASFTGAVLYGVSIIYFRHEAYWEFFTDTMVWLPLLVLGAEKIIRERRPAWFIVACSLTLINNFYFAYINLIFIGIYVLFRWLIRLEPHEEKRWIQIRLFLVSGFISFGISAAAFVPVVYGFLNNLRPPYSQKIEWLNFDDNILFSSRIIIVPAAFLLFLFIISFYKNRVFRLFAGLSLLFILFHFSPYAASVFNGFSAPQNRFEYVLAFTIAGAAAAGLSQLSDLKRKELLPAAAVVLLLYLYHIQRYKLDIWKPANESILLLLLMTIAALFAAAFAKKRANMAVYGIIILSSLFVANSYQKYALSEGGDLDSVTKEYLTSEEYRGRESSELIRRLQKEDDDPLMRIDWMNGVRNNTPIIYGFNGFSAYSSILNKDLLAFYWNDLSIDMGRESVSRYASLGDRANLYSLLYGKYYMTEKTNEASVPYGFKKHLETEHYAVYENQYMLPFVKTADAIYSESELDRLPALAKEQAMLKGIILKDPSGKTEQTPKPSNLITKSDITAKQAQYQKGLLTVTGENGGELIITPKQPSSAPGDYYVSFYLKSKAKDKGFTLKVNDYVTTRKSNKSIYKTGVNNITVRVPKSRHISINLPKGTYELRNIALYEENYQTLKNAVMQNKTEKADKLNWNKNRLTFAYHLSKDQYIMLPIPYEKGWELKINGKTQKIEKADYAFIGFKAQKGDNHIELTYYPPYFKISAIISLVSLLLAVFYIRRKKPGSI
>NZ_CP021169.1|WP_003244113.1|866011_867001_+|glycosyltransferase-family-2-protein
MKQGLISIIIPSYNEGYNVKLIHESLKKEFKNIHYDYEIFFINDGSVDDTLQQIKDLAATCSRVKYISFSRNFGKEAAILAGFEHVQGEAVIVMDADLQHPTYLLKEFIKGYEEGYDQVIAQRNRKGDSFVRSLLSSMYYKFINKAVEVDLRDGVGDFRLLSRQAVNALLKLSEGNRFSKGLFCWIGFDQKIVFYENVERKNGTSKWSFSSLFNYGMDGVVSFNHKPLRLCFYTGIFILLLSIIYIIATFVKILTNGISVPGYFTIISAVLFLGGVQLLSLGIIGEYIGRIYYETKKRPHYLIKEANIPNKDLPETNELKSMRRLTKMH
>NZ_CP021169.1|WP_086343604.1|864918_865779_+|alpha/beta-hydrolase
MDGVKCQFVNTNGITLHVAAAGREDGPLIVLLHGFPEFWYGWKNQIKPLVDAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLITQFTDEKAIVIGHDWGGAVAWHLASTRPEYLEKLIAINIPHPHVMKTVTPLYPPQWLKSSYIAYFQLPDIPEASLRENDYETLDKAIGLSDRPALFTSEDVSRYKEAWKQPGALTAMLNWYRALRKGSLAEKPSYETVPYRMIWGMEDRFLSRKLAKETERHCSNGHLIFVDEASHWINHEKPAIVNQLILEYLKNQ
>NZ_CP021169.1|WP_003242803.1|864599_864932_+|SdpC-immunity-protein-SpdL
MTGLVGGGLMIIAGILIKLFPPKSINSVYGYRTRRSMSDQRLWNEANRYSASLMILSGLVIAGMGLLLGSNLFILQLILLIAACVITFMLTEKRLKIMTHSQGGDRSGRS
>NZ_CP021169.1|WP_086343603.1|863996_864515_+|SH3-domain-containing-protein
MKKKQVMLALTAAAGLGLTALHSAPAAKAAPLHDISVSMPSSDTYIIKAGKLNVRTEPNHEGDILGTVSSEQKVKVDRFVNADWAQIYFKGKKAYISTHFLMKTASQAKTMKQTAFYAPTPENGKAKQLSSGTEVTILGWGFSENGGFDFTWAFVDYGGVKGYIHTKDLQMR
>NZ_CP021169.1|WP_003243789.1|863582_863852_+|YfhJ-family-protein
MNMYIEKLTNLLLEKNEMISYIQAKTWVELLWSDFEATYAKAGHAYQGEKMTEKIVTQWIENYGGQLHLFQSSRNDVNDYLNQSRGLLH
>NZ_CP021169.1|WP_003242708.1|873521_873782_+|ygaB-like-family-protein
MTEFEKLVSEQMKTMDKLLDLQSELDRCKQIEAELRHLERDARLRGIQAEIAVKRKHLADIQDMFQKQTEQVIRSYRSSEKPSSFV
>NZ_CP021169.1|WP_003223272.1|873925_874456_+|DUF402-domain-containing-protein
MGYPKEGETIQIHSYKHNGLIHRIWNETTILKSTEMCVIGANDRTMVTESDGRTWITREPAICYFHARQWFNVIGMLREDGVHYYCNISSPFAYDGEAIKYIDYDLDVKVFPDMTYNILDEDEYDDHRKAMNYPKEIDSILRDYLNTLLHWIHQRQGPFAPEFVDMWYERYLRYTK
>NZ_CP021169.1|WP_009966836.1|874542_876285_+|ABC-transporter-ATP-binding-protein
MGVMKRYMQFVKPYKKQIFVTVLIGIVKFSIPLALPLLLKYVVDDIIQGGGTASDKTTSLFTIMAIMFALFLILRPPVEYYRQYFAQWTASKVLYDIRAKLFDHIQKLSLRFYANTRTGEVISRVINDVEQTKDFVITGLMNIWLDMLTILIVISIMLTLDVKLTLISIVLFPLYGISVKYFYGRLRKLTRERSQALAQVQGHLHERIQGMPVIRSFAIEDHEQAQFNEKNGHFLDKAIRHTNWNAKTFAVVNTITDLAPLIVIACAGYFVINGPLTVGTMVAFVGYIDRMYNPVRRLINSSTTLTQSIASMDRVFEFIDEPYELTDKPNAIKADQIRGGVEFQNVSFQYEKDKENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRFYDVTSGRLLIDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIIEAAKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVMENGTIIEIGTHDELMDYESQYKHLFTIQNLN
>NZ_CP021169.1|WP_014479224.1|876361_877423_-|aromatic-acid-exporter-family-protein
MKLGARIFKTGIAITLALYLASWIGLPAPIFAGIAAIFAIQPSIYRSFLIIIDQVQANIIGAVIATVFGLIFGPSPIMIGLTAVIVITIMLKLKIEHTISIALVTVIAILESAGDDFLMFALIRTSTVILGVLSSFIVNLVFLPPKYETKLIHNTVENTEEIMKWIRLSMRQSTEHSILKEDIEKLKEKMIKLDQTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHRLENEIYHMPEEFQETLTEELDYLLYWHERILMRFVGKIKPHDDAVEEGIQYKQLLTKSFLKNQQNTDEELIDYNMLNIMASAVEYREQLEHLETLITSFQTYHPKDCEIETEE
>NZ_CP021169.1|WP_086343607.1|877643_878933_-|glutamate-1-semialdehyde-2,1-aminomutase
MHTKSIELHNEALQHIVGGVNSPSRSYKAVGGGSPVAMERASGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITEAIKKAAEKGVLYGTPTKHEVTFAKMLKEAIPAMDKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIANEVITVPFNDIDSYKAALDKWGSEIAAVLVEPIVGNFGIVEPKEGFLEKVNELTHNAGALVIYDEVITAFRFMYGGAQDLLQVKPDLTALGKIIGGGLPIGAYGGKQEIMEQVAPLGPAYQAGTMAGNPASILSGIACLEVLKEEGVYEKLDHLGAMLEEGILKHAETHGITITVNRLKGALTVYFSDEKVENYEQAERSDGETFATFFKLMLERGINLAPSKYEAWFITTAHTEQDIKDTLAAVEDAFKHLKN
>NZ_CP021169.1|WP_086343608.1|879084_879558_+|thioredoxin-dependent-thiol-peroxidase
MTIEIGHKAPDLELKGDHGETVKLSDYKGKYIVLYFYPKDMTPGCTTEACDFRDSHESFAELDAVIIGVSPDSQEKHGKFKEKHNLPFLLLVDDEHELAEAFDVWKLKKNFGKEYMGIERSTFLIDKEGRLIKEWRKVKVKDHVAEALQTLKDMSEK
>NZ_CP021169.1|WP_003223285.1|879680_880118_+|peroxide-responsive-transcriptional-repressor-PerR
MAAHELKEALETLKETGVRITPQRHAILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLVKELTYGDASSRFDFVTSDHYHAICENCGKIVDFHYPGLDEVEQLAAHVTGFKVSHHRLEIYGVCQECSKKENH
>NZ_CP021169.1|WP_014479226.1|880152_880506_-|YgzB-family-protein
MAKYSSKINKIRTFALSLVFVGFIIMYIGIFFKESVLLSSLFMILGLLSIGLSTVVYFWIGMLSTKAVRVICPGCDKETKVLGRVDMCMHCREPLTLDKGLEGKEFDESYNKKKMSK
>NZ_CP021169.1|WP_043857881.1|880713_881598_+|hypothetical-protein
MENLLRPIYQERASHPNTLAVIMIERRNKTSSLTDNFDAALLVIVKDADEPVFIKHYEFDHQTASLHVVTDSQIQEWILLGTNRRIIDWIVNGRVLFDRNEYVVELIDRLNTFPFAERKLKIGLEYGKLIRRYVEGKAFFEADQFLDAYNAVVHALHHLARIEVIDRGFHPETTVWSQVRQMEPQVYKLYSELIESHESLEKRLELLFLANDFLIHSKAEIGSAHLFEVMKEKDIWQFGELLQHHDLKHFTQDLGVMLDYLTEKGLINVCQIETKGQAVYHRGYSFKKGVDSDS
>NZ_CP021169.1|WP_086343609.1|888568_889345_-|sporulation-control-protein-Spo0M
MSLFKKLAASAGIGAAKVDTILEKDAYFPGEEVQGTVHVKGGKIAQDIRYIDLQLSTRYVIVKDDEEHRKYATIHSFRVTGSFTIQPGEEHQFPFTFTLPLDTPITVGKVEVAVVTDLDIQGGIDKSDHDRIFVEAHPWIENVLEAIENLGFHLNEADCEQAPYFQRRLPFVQEFEFVPTSGYYRQMLDELELIFLLDEDGLEIIFEVDRRARGLRGWLEEMYNDGEQLVRVRFSQSELEDTEELEEVLEEILDQYAE

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Crispr_ID: NZ_CP021169_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021169_3

2938853-2938960

Orphan

Consensus_repeat	Method
TGATGGGAATCGAACCCACGACAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021169_3

>merge|NZ_CP021169|3|2938853-2938960|CRISPRCasFinder
TGATGGGAATCGAACCCACGACATCAGCTTGGAAGGCTGAGGTTTTACCACTAAACTACACCCGCAATTTTTATTTGGGGCGATTGATGGGAATCGAACCCACGAATG

>NZ_CP021169|3|3|2938853-2938960|CRISPRCasFinder
TGATGGGAATCGAACCCACGACAT	CAGCTTGGAAGGCTGAGGTTTTACCACTAAACTACACCCGCAATTTTTATTTGGGGCGAT
TGATGGGAATCGAACCCACGAATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021169.1\|WP_086344235.1\|2925852_2926287_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021169.1\|WP_086344238.1\|2929834_2930302_+\|TspO/MBR-family-protein	unknown	unknown	gnl\|CDD\|226007
NZ_CP021169.1\|WP_086344239.1\|2932715_2934170_-\|glycogen-synthase-GlgA	unknown	unknown	gnl\|CDD\|234809
NZ_CP021169.1\|WP_086344242.1\|2953338_2953881_+\|transcriptional-regulator-GbsR	unknown	unknown	gnl\|CDD\|224427
NZ_CP021169.1\|WP_003242867.1\|2949282_2949771_+\|DinB-family-protein	unknown	unknown	gnl\|CDD\|378981
NZ_CP021169.1\|WP_015714591.1\|2946501_2947023_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP021169.1\|WP_026113746.1\|2948590_2949115_-\|NfeD-family-protein	unknown	unknown	gnl\|CDD\|376684
NZ_CP021169.1\|WP_024571874.1\|2951667_2953140_-\|betaine-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143437
NZ_CP021169.1\|WP_014477772.1\|2947040_2948570_-\|flotillin-lipid-rafts-scaffold-protein-FloT	unknown	unknown	gnl\|CDD\|225177
NZ_CP021169.1\|WP_003243227.1\|2950442_2951651_-\|choline-dehydrogenase	unknown	unknown	gnl\|CDD\|341481
NZ_CP021169.1\|WP_042977512.1\|2926288_2927344_-\|spore-coat-protein-CotS	unknown	unknown	gnl\|CDD\|131952
NZ_CP021169.1\|WP_086344237.1\|2928681_2929755_+\|spore-coat-kinase-CotI	unknown	unknown	gnl\|CDD\|131952
NZ_CP021169.1\|WP_086344240.1\|2935221_2936364_-\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|179997
NZ_CP021169.1\|WP_015251371.1\|2934166_2935198_-\|glucose-1-phosphate-adenylyltransferase-subunit-GlgD	unknown	unknown	gnl\|CDD\|273966
NZ_CP021169.1\|WP_086344241.1\|2936360_2938244_-\|1,4-alpha-glucan-branching-enzyme	unknown	unknown	gnl\|CDD\|273667
NZ_CP021169.1\|WP_015714590.1\|2945881_2946460_+\|energy-coupled-thiamine-transporter-ThiT	unknown	unknown	gnl\|CDD\|226377
NZ_CP021169.1\|WP_003243556.1\|2954077_2954623_+\|biofilm-surface-layer-protein-BslA	unknown	unknown	gnl\|CDD\|379999
NZ_CP021169.1\|WP_017697649.1\|2949776_2950355_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377051
NZ_CP021169.1\|WP_033884545.1\|2930332_2932729_-\|glycogen/starch/alpha-glucan-phosphorylase	unknown	unknown	gnl\|CDD\|273967
NZ_CP021169.1\|WP_086344236.1\|2927358_2928492_-\|spore-coat-protein-CotSA	unknown	unknown	gnl\|CDD\|340831

Protein	Function_ID	Function_description	E-value
NZ_CP021169.1\|WP_026113746.1\|2948590_2949115_-\|NfeD-family-protein	gnl\|CDD\|376684	pfam01957, NfeD, NfeD-like C-terminal, partner-binding. NfeD-like proteins are widely distributed throughout prokaryotes and are frequently associated with genes encoding stomatin-like proteins (slipins). There appear to be three major groups: an ancestral group with only an N-terminal serine protease domain and this C-terminal beta sheet-rich domain which is structurally very similar to the OB-fold domain, associated with its neighboring slipin cluster; a second major group with an additional middle, membrane-spanning domain, associated in some species with eoslipin and in others with yqfA; a final 'artificial' group which unites truncated forms lacking the protease region and associated with their ancestral gene partner, either yqfA or eoslipin. This NefD, C-terminal, domain appears to be the major one for relating to the associated protein. NfeD homologs are clearly reliant on their conserved gene neighbor which is assumed to be necessary for function, either through direct physical interaction or by functioning in the same pathway, possibly involve with lipid-rafts.	0.000174975
NZ_CP021169.1\|WP_086344238.1\|2929834_2930302_+\|TspO/MBR-family-protein	gnl\|CDD\|226007	COG3476, COG3476, Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) [Signal transduction mechanisms].	4.7042e-40
NZ_CP021169.1\|WP_086344239.1\|2932715_2934170_-\|glycogen-synthase-GlgA	gnl\|CDD\|234809	PRK00654, glgA, glycogen synthase GlgA.	0
NZ_CP021169.1\|WP_086344242.1\|2953338_2953881_+\|transcriptional-regulator-GbsR	gnl\|CDD\|224427	COG1510, COG1510, Predicted transcriptional regulators [Transcription].	8.37089e-72
NZ_CP021169.1\|WP_003242867.1\|2949282_2949771_+\|DinB-family-protein	gnl\|CDD\|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	3.20062e-17
NZ_CP021169.1\|WP_015714591.1\|2946501_2947023_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	2.99524e-11
NZ_CP021169.1\|WP_024571874.1\|2951667_2953140_-\|betaine-aldehyde-dehydrogenase	gnl\|CDD\|143437	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.	0
NZ_CP021169.1\|WP_014477772.1\|2947040_2948570_-\|flotillin-lipid-rafts-scaffold-protein-FloT	gnl\|CDD\|225177	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown].	5.60281e-123
NZ_CP021169.1\|WP_003243227.1\|2950442_2951651_-\|choline-dehydrogenase	gnl\|CDD\|341481	cd08551, Fe-ADH, iron-containing alcohol dehydrogenases (Fe-ADH)-like. This family contains large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases, insect-type, or short-chain alcohol dehydrogenases, iron-containing alcohol dehydrogenases, among others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.	1.69004e-175
NZ_CP021169.1\|WP_042977512.1\|2926288_2927344_-\|spore-coat-protein-CotS	gnl\|CDD\|131952	TIGR02906, Spore_coat_protein_S, spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers. [Cellular processes, Sporulation and germination].	1.01653e-129
NZ_CP021169.1\|WP_086344237.1\|2928681_2929755_+\|spore-coat-kinase-CotI	gnl\|CDD\|131952	TIGR02906, Spore_coat_protein_S, spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers. [Cellular processes, Sporulation and germination].	1.47738e-131
NZ_CP021169.1\|WP_086344240.1\|2935221_2936364_-\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP021169.1\|WP_015251371.1\|2934166_2935198_-\|glucose-1-phosphate-adenylyltransferase-subunit-GlgD	gnl\|CDD\|273966	TIGR02092, Glycogen_biosynthesis_protein_GlgD, glucose-1-phosphate adenylyltransferase, GlgD subunit. This family is GlgD, an apparent regulatory protein that appears in an alpha2/beta2 heterotetramer with GlgC (glucose-1-phosphate adenylyltransferase, TIGR02091) in a subset of bacteria that use GlgC for glycogen biosynthesis. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP021169.1\|WP_086344241.1\|2936360_2938244_-\|1,4-alpha-glucan-branching-enzyme	gnl\|CDD\|273667	TIGR01515, branching_enzym, alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. This model describes the glycogen branching enzymes which are responsible for the transfer of chains of approx. 7 alpha(1--4)-linked glucosyl residues to other similar chains (in new alpha(1--6) linkages) in the biosynthesis of glycogen. This enzyme is a member of the broader amylase family of starch hydrolases which fold as (beta/alpha)8 barrels, the so-called TIM-barrel structure. All of the sequences comprising the seed of this model have been experimentally characterized. This model encompasses both bacterial and eukaryotic species. No archaea have this enzyme, although Aquifex aolicus does. Two species, Bacillus thuringiensis and Clostridium perfringens have two sequences each which are annotated as amylases. These annotations are aparrently in error. GP\|18143720 from C. perfringens, for instance, contains the note "674 aa, similar to gp:A14658_1 amylase (1,4-alpha-glucan branching enzyme (EC 2.4.1.18) ) from Bacillus thuringiensis (648 aa); 51.1% identity in 632 aa overlap." A branching enzyme from Porphyromonas gingivales, OMNI\|PG1793, appears to be more closely related to the eukaryotic species (across a deep phylogenetic split) and may represent an instance of lateral transfer from this species' host. A sequence from Arabidopsis thaliana, GP\|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP021169.1\|WP_015714590.1\|2945881_2946460_+\|energy-coupled-thiamine-transporter-ThiT	gnl\|CDD\|226377	COG3859, COG3859, Predicted membrane protein [Function unknown].	7.93984e-73
NZ_CP021169.1\|WP_003243556.1\|2954077_2954623_+\|biofilm-surface-layer-protein-BslA	gnl\|CDD\|379999	pfam17735, BslA, Biofilm surface layer A. This family includes members such as BslA (previously called YuaB). Secreted BslA from Bacillus subtillis has been shown to form surface layers around the biofilm self-assembling at interfaces of B. subtilis biofilms, forming an elastic film. structural analysis revealed that BslA consists of an Ig-type fold with the addition of an unusual, extremely hydrophobic cap region. The hydrophobic cap exhibits physiochemical properties similar to the hydrophobic surface found in fungal hydrophobins; thus, BslA is defined as member of a class of bacterially produced hydrophobins.	5.35887e-46
NZ_CP021169.1\|WP_017697649.1\|2949776_2950355_-\|MOSC-domain-containing-protein	gnl\|CDD\|377051	pfam03473, MOSC, MOSC domain. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. These MOSC domains contain an absolutely conserved cysteine and occur either as stand-alone forms or fused to other domains such as NifS-like catalytic domain in Molybdenum cofactor sulfurase. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters.	9.40942e-06
NZ_CP021169.1\|WP_033884545.1\|2930332_2932729_-\|glycogen/starch/alpha-glucan-phosphorylase	gnl\|CDD\|273967	TIGR02093, Glycogen_phosphorylase, glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP021169.1\|WP_086344236.1\|2927358_2928492_-\|spore-coat-protein-CotSA	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	8.47774e-75

>NZ_CP021169.1|WP_086344241.1|2936360_2938244_-|1,4-alpha-glucan-branching-enzyme
MAAASPTAHDVYLFHEGSLFKSYQLFGSHYRELNGKSGYEFCVWAPHASEVRVAGDFNSWSGEEHVMHRVNDNGIWTLFIPGIGEKERYKYEIVTNNGEIRLKADPYAIYSEVRPNTASLTYNLEGYSWQDQKWQKKQKAKTLYEKPVFIYELHLGSWKKHSDGRHYSYKELSQTLIPYIKEHGFTHIELLPVYEHPYDRSWGYQGTGYYSPTSRFGTPHDLMKFVDECHQQNIGVILDWVPGHFCKDAHGLYMFDGEPLYEYKEERDRENWLWGTANFDLGKPEVHSFLISNALYWAEFYHIDGFRVDAVANILYWPNQDERHTNPYAVEFLKKLNQTMREAYPHVMMIAEDSTEWPQVTGAVEEGGLGFHYKWNMGWMNDVLKYMETPPEERRHCHQLISFSLLYAFSEHFVLPFSHDEVVYGKKSLLNKMPGDYWQKFAQYRLLLGYMTVHPGKKLIFMGSEFAQFDEWKDTEQLDWFLDSFPMHQKASVFTQDLLRFYQKSKILYEHDHRAQSFEWIDVHNDEQSIFSFIRYGKKHGEALVIICNFTPVVYHQYDVGVPFFTQYIEVLNSDSETYGGSGQINKKPLSAKKGAFHHKPCYITMTIPPYGISILRAVKKRGEIKR
>NZ_CP021169.1|WP_086344240.1|2935221_2936364_-|glucose-1-phosphate-adenylyltransferase
MKKQCVAMLLAGGKGSRLSGLTKNMAKPAVSFGGKYRIIDFTLSNCSNSGIDTVGILTQYQPLELNSYIGIGSAWDLDRYNGGVTVLPPYAESSEVKWYKGTASAIYENLNYLYQYDPEYVLILSGDHIYKMDYGKMLDYHIEKKADVTISVIEVGWEEASRFGIMKANPDGTITHFDEKPKFPKSNLASMGIYIFNWPLLKQYLEMDDQNPYSSHDFGKDIIPLLLEEKKKLSAYPFKGYWKDVGTVQSLWEANMDLLKEDSELKLFERKWKIYSVNPNQPPQFISSDAQVQDSLVNEGCVVYGNVSHSVLFQGVTVGKHTTVTSSVIMPDVTIGEHVVIENAIVPNGMVLPDGAVIRSEKDIEEVLLVSEEFVEKELI
>NZ_CP021169.1|WP_015251371.1|2934166_2935198_-|glucose-1-phosphate-adenylyltransferase-subunit-GlgD
MFNNQMLGVIDETTYKHSLQDLTAQRSLGAIPFAGRYRLIDFMLSNMVNADIRSVAIFPKYRYRSLMDHLGAGKEWDLHRKKDGLFFFPSPHLHHEYDEFGSFRQFSDHLDYFHRSTQQYAVISNSHTVCNIQFQYVLKRHQEVGCDVTEVFQDGQSLQIYIMSTTLLKDLIYGHSEKGYKTIQEAVEKESSALTICPYEYSGYAAVIDSVEKYYTHSMELIQPRFWQQVFLPQQPIYTKVKDEPPTKYGKHSTVKNSLVANGCVLEGEVENCILFRAVHVGKGTKLKNCIIMQKTQIGEDCLLEQVISDKDVKIGKATEAVGTAEQPLVLRKGLVQGELMNS
>NZ_CP021169.1|WP_086344239.1|2932715_2934170_-|glycogen-synthase-GlgA
MKILFAVSECTPFVKSGGLADVAGALPKALARLGNEVAVMLPKYSQIPEPWKKRMKKQAECTVAVGWRQQYCGIEHMAENDVNYYFIDNEYYFNRDSLYGHYDDGERFAFFSRAVLEAAKVVNVQADIVHTHDWHTAMVNYLLKEEYRKHPFYERMKSVLTIHNLQFQGIFPPDVTHDLLGLEMDHFHYERLECNGFVNFMKAGIIAADHVTTVSPTYRNEIMTPYYGEQLEQVLQYREDDVTGILNGIDDTFYQPKSDPYIEAQYDSGDLACKLENKTKLQQRMGLPEKNDIPLISMVTRLTKQKGLDLVRRIMHELLEEQDIQLVVLGTGEREFEDYFRYAEFAFHEKCRAYIGFDEPLAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGAIPIVRETGGLYDTVRAYQEEEGTGNGFTFSAFNAHDLKFTIERALSFYRQQDVWKSIVKTAMNADYSWGKSAKEYQRIFEQVTRSGRDVLE
>NZ_CP021169.1|WP_033884545.1|2930332_2932729_-|glycogen/starch/alpha-glucan-phosphorylase
MFSSKERFADLFLKRLEMTCGKSFKDSAKLDQYKTLGNMVREYISADWIETNEKSRSNSGKQTYYLSIEFLLGQLLEQNLMNLGVRDVVEAGLKEIGINLEEILQIENDAGLGNGGLGRLAACFLDSLASLNLPGHGMGIRYKHGLFEQKIVDGHQVELPEQWLKNGNVWEVRNADQAVDVPFWGEVHMTEKSGRLHFRHEQATIVTAVPYDIPIIGYETGTVNTLRLWNAEPYAHYHGGNILSYKRETEAVSEFLYPDDTHDEGKILRLKQQYFLVCASLKSIVNNYRKTHKSLSGLHKKVSIHINDTHPALAVPELMRILLDEENMSWEEAWHITVHTISYTNHTTLSEALEKWPIHLFKPLLPRMYMIIEEINERFCRAVWEKYPGDWKRIEDMAITAHGVVKMAHLAIVGSYSVNGVAKIHSDILMEREMRDFHLLFPNRFNNKTNGIAHRRWLLKANPGLSAIITEAIGDEWVKQPESLIRLEPYATDPAFIEQFQNNKSKKKQELADLIFCTAGVVVNPDSIFDVQVKRLHAYKRQLLNVLHIMYLYNRLKEDAGFSIYPQTFIFGAKASPSYYYAKKIIKLIHSVAEKVNYDPAVKQLIKVVFLENYRVSMAERIFPASDVSEQISTASKEASGTGNMKFMMNGALTIGTHDGANIEILERVGPDCIYTFGLKADEVLSYQENGGYRSREYYQHDRRIRQVADQLINGFFEGEADEFESIFDSLLPHNDEYFVLKDFSSYADAQERIQADYRERRKWSERSIVNIAHSGYFSSDRTIREYAKDIWGIKPMM
>NZ_CP021169.1|WP_086344238.1|2929834_2930302_+|TspO/MBR-family-protein
MKKIVGALAVFVITYALFSASGYLFPVDQEWYNSLKKPDWTPSRTAIGIIWAILFALISLSAAIVYAAFSFKGAKSFWFTLLINYVLNQAFSYFQFTQKNLLAASLDCLLVAITAIVLLIIAKKYSRAASYLLLPYFLWSAFATFLSFTINSMNL
>NZ_CP021169.1|WP_086344237.1|2928681_2929755_+|spore-coat-kinase-CotI
MCPLMAENHEVIEEGNSSELPLSAEDAKKLTELAENVLQGWDVQTEKIDVIQGNQMALVWKVHTDSGAVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPVFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQFYLQEIDGFIEDGLRIKDQLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDEETFHVMLNAYESRAPLTEEQKQVMFIDMLFPYELYDVIREKYVRKSALPKEELESAFEYERIKANALKQLI
>NZ_CP021169.1|WP_086344236.1|2927358_2928492_-|spore-coat-protein-CotSA
MKIALIATEKLPVPSVRGGAIQIYLEAVAPLIAKKHEVTVFSIKDPNLADREKVDGVHYVHLDEDRYEEAVGAELKKSRFDIVHVCNRPSWVPKLKKQAPDAVFILSVHNEMFAYDKISQAEGEICIDSVAQIVTVSDYIGQTITSRFPSARSKTKTVYSGVDLKTYHPRWTNEGQRAREEMRSELGLHGKKIVLFVGRLSKVKGPHILLQALPDIIEEHPDVMMVFIGSKWFGDNELNNYVKHLHTLGAMQKDHVTFIQFVKPKDIPRLYTMSDVFVCSSQWQEPLARVHYEAMAAGLPIITSNRGGNPEVIEEGKNGYIIHDFENPKQYAERINDLLSSSEKRERLGKYSRREAESNFGWQRVAENLLSVYEKNR
>NZ_CP021169.1|WP_042977512.1|2926288_2927344_-|spore-coat-protein-CotS
MYQKEHEEQIVSEILSYYPFHIDHVALKSNKSGRKIWEVETDHGPKLLKEAQMKPERMLFITQAHAHLQEKGLPIAPIHQTKNGGSCLGTDQVSYSLYDKVTGKEMIYYDAEQMKKVMSFAGHFHHASKGYVCTDESKKRSRLGKWHKLYRWKLQELEGNMQIAASYPDDVFSQTFLKHADKMLARGKEALRALDDSEYETWTKETLEHGGFCFQDFTLARLTEIEGEPFLKELHSITYDLPSRDLRILLNKVMVKLSVWDTDFMVALLASYDAVYPLTEKQYEVLWIDLAFPHLFCAIGHKYYLKQKKTWSDEKYNWALQNMISVEESKDSFLDKLPELYKKIKAYREAN
>NZ_CP021169.1|WP_086344235.1|2925852_2926287_-|hypothetical-protein
MRSSRQKASISKLDLDQFVFTPPGPMGWQAHDSMSAEKEEEEKHLDVGSIRELPHINAPKEYQEETKEKETDHKIVDDEEETKFETILEPEEERDSKRSAPPYVEEEEEDEEPDLAEEAKVEIIILPSESKPAPWFSQTVKRKA
>NZ_CP021169.1|WP_015714590.1|2945881_2946460_+|energy-coupled-thiamine-transporter-ThiT
MNQSKQLVRLIEIAIMTAAAVILDIVSGMFLSMPQGGSVSIMMIPIFLISFRWGVKAGLTTGLLTGLVQIAIGNLFAQHPVQLLLDYIVAFAAIGISGCFASSVRNAAVSKTKGKLIVSVVSAVFIGSLLRYAAHVISGAVFFGSFAPKGTPVWIYSLTYNATYMVPSFIICAIVLCLLFMTAPRLLKSDKA
>NZ_CP021169.1|WP_015714591.1|2946501_2947023_-|GNAT-family-N-acetyltransferase
MVTVREAKLEDIKGIAKVHVDSWRTTYHETIPIDYLNSLNYKEFEDKWKSRSLKGVFVAQDEMGSVFGFASFGPIRSEQEGYDGELYAIYLLEERQRQGAGRALLAKGAEFLLQHGFSSMFVWVIEQNPSIIFYQAYSPERVAEDNFEIAGVRLKEVGLGWPDLSALKTLLNR
>NZ_CP021169.1|WP_014477772.1|2947040_2948570_-|flotillin-lipid-rafts-scaffold-protein-FloT
MTMPIIMIIGVVFFLLIALIAVFITKYRTAGPDEALIVTGSYLGNKNVHVDEGGNRIKIVRGGGTFVLPVFQQAEPLSLLSSKLDVSTPEVYTEQGVPVMADGTAIIKIGGSIGEIATAAEQFLGKSKDDREQEAREVLEGHLRSILGSMTVEEIYKNREKFSQEVQRVASQDLAKMGLVIVSFTIKDVRDKNGYLESLGKPRIAQVKRDADIATAEADKETRIKRAEADKDAKKSELERATEIAEAEKINQLKMAEFRREQDTAKANADQAYDLETARARQQVTEQEMQVKIIERQKQIELEEKEILRRERQYDSEVKKKADADRYSVEQSAAAEKAKQLAEADAKKYSIEAMAKAEAEKVRIDGLAKAEAEKAKGETEAEVIRLKGLAEAEAKEKIAAAFEQYGQAAIFDMIVKMLPEYAKQAAAPLSNIDKITVVDTGGSGESSGANKVTSYATNLMSSLQESLKASSGIDVKEMLENFSGKGNVKQSINELTNEIKEAKTVQKSE
>NZ_CP021169.1|WP_026113746.1|2948590_2949115_-|NfeD-family-protein
MELFGVPIQTMYLYTLIIAGSLTLLFLFFGDVFAGLPEGIPFLNPTLVLSFFTCFSAGGYIGELVLPLSSLLIALLSCILSIMLVVLLHIFVLVPLSSAEESLAYREDDLRGRLGKVITAVPVDGFGEVVIEGIGGTISKSAVSFDNQQISYGTTVLVVDINNGVLSVTPHEPI
>NZ_CP021169.1|WP_003242867.1|2949282_2949771_+|DinB-family-protein
MSIFNEARLETWNELKGLSDEKLNQKPSAEEWSIREVLDHLKKIDMTAQKMLKERVKDAPIKEIEEKPLEVAQDRNNKRKAPSHLEPAHDFISGSQMKRELDVVREQLTAAIASLKEEDFERVLPHPVFQELTVRQWIDFIGHHEKRHLSQMKEIKEKIERA
>NZ_CP021169.1|WP_017697649.1|2949776_2950355_-|MOSC-domain-containing-protein
MWKRMTAKAEGLYIADTDSFVTKQMDKLDFDYGGIPGDLHFGLTKKAGAREPMFSRGTEIFNRRQISIVSIEECNEIALKMGVPRILPEWLGANVAVSGMPNLTSLKEGSRIIFPSGAALLCEGENDPCIQPGEVIQSYYPDQPKLAPAFVRHALGIRGIVCIVERPGAVYTGDEIEVHSYQRKVKRKAERV
>NZ_CP021169.1|WP_003243227.1|2950442_2951651_-|choline-dehydrogenase
MTLNMKVESMQKFHTFEIPTVIKHGIGAIKHTGEEVAALGVSKALLVTDPGIYKAGVADPVIESLKEAGIEVVLFNKVEPNPPVRLVNEGSELYKKENCNGLVAVGGGSSMDTAKAIGVEATHEGSVLDYEAADGKKPLENRIPPLTTIPTTAGTGSEVTQWAVITDEEREFKFNTGGPLIAAHLTIIDPELHVSMPPHVTAMTGIDALAHAIECYTMKFAQPITDAVALMAIEYAAHYIKRAFADGEDLEARYGMAQAAMLAGLSYGSESAGAAHAMSQTLGGIIPVAHGQCVAAMMGPVMEYNWKGYPEKFARIAKAFGIDTSKMTTEEAAKASVNWMYDLVEDLEVPTLEEQGVSPDMIERLSKEAMKDPQTFGNPRDLNEKAYNWIYKRCFNLTPKTV
>NZ_CP021169.1|WP_024571874.1|2951667_2953140_-|betaine-aldehyde-dehydrogenase
MSQTLFIDGEWISAEKEQIRSIINPFNQEEIATVSEGGREDAIKAIAAARRAFDKGEWSSLSGLERGKIVLKIAELIRRDLEELAELESLDTGKTLEESKADMDDIANVFQYYAGLADKDGGEIISSPIPDSESKIIREPIGVCGQITPWNYPLLQASWKIAPALAAGNTIVMKPSEITPLTTIKVFKLMEEAGVPKGVANLVLGPGATVGDELAVNRDVDLISFTGGIETGKKIMRAASGNVKKIALELGGKNPNIVFKDADLEVAVDQALNAVFFHAGQVCSAGSRLLVEDAIHDQFLAELVKRAKRIKLGNGFHAETESGPLISAEHRAKVEKYVEIGIEEGAKLETGGKRPEDPALQNGFFYEPTIFSNCNSDMRIVQEEVFGPVLTVETFSSEEEVIELANDTIYGLAGAVWSKDIEKCERVAARLRMGTVWINDFHPYFAQAPWGGYKQSGFGRELGKIGLEEYTEVKHVYRNTKPAAVNWFNS
>NZ_CP021169.1|WP_086344242.1|2953338_2953881_+|transcriptional-regulator-GbsR
MDENPEFTAIEQARDLVIDSIAETMDLYGITRSVGILYGTMYMRDEMTLDEMREELQMSKPSMSTGVKKLQDLNVVKKTFHRGIRKHTFVAEKDFFKFFTNFFPPKWEREVQVNVAAIEEAQADLQKVLSKEDLNDDIKNEALQLYDQLESSKAYYDWLKRLAESVQTGEIFKFIPIETK
>NZ_CP021169.1|WP_003243556.1|2954077_2954623_+|biofilm-surface-layer-protein-BslA
MKRKLLSSLAISALSLGLLVSAPTASFAAESTSTKAHTESTMRTQSTASLFATITGASKTEWSFSDIELTYRPNTLLSLGVMEFTLPSGFTANTKDTLNGNALRTTQILNNGKTVRVPLALDLLGAGEFKLKLNNKTLPAAGTYTFRAENKSLSIGNKFYAEASIDVAKRSTPPTQPCGCN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP021169_3	3.1\|2938877\|60\|NZ_CP021169\|CRISPRCasFinder	2938877-2938936	60	NZ_CP024037	Bacillus aryabhattai strain K13 plasmid unnamed2	10417-10476	7	0.883
NZ_CP021169_3	3.1\|2938877\|60\|NZ_CP021169\|CRISPRCasFinder	2938877-2938936	60	NZ_CP026740	Bacillus megaterium strain YC4-R4 plasmid unnamed4	70764-70823	7	0.883
NZ_CP021169_3	3.1\|2938877\|60\|NZ_CP021169\|CRISPRCasFinder	2938877-2938936	60	NC_017139	Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence	1318-1377	7	0.883
NZ_CP021169_3	3.1\|2938877\|60\|NZ_CP021169\|CRISPRCasFinder	2938877-2938936	60	NZ_CP010587	Bacillus megaterium Q3 plasmid p1, complete sequence	838-897	7	0.883
NZ_CP021169_3	3.1\|2938877\|60\|NZ_CP021169\|CRISPRCasFinder	2938877-2938936	60	NZ_CP023319	Bacillus megaterium strain A plasmid p2, complete sequence	75825-75884	7	0.883
NZ_CP021169_3	3.1\|2938877\|60\|NZ_CP021169\|CRISPRCasFinder	2938877-2938936	60	NC_020451	Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence	1960-2019	9	0.85
NZ_CP021169_3	3.1\|2938877\|60\|NZ_CP021169\|CRISPRCasFinder	2938877-2938936	60	NZ_CP015440	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence	64773-64832	12	0.8
NZ_CP021169_3	3.1\|2938877\|60\|NZ_CP021169\|CRISPRCasFinder	2938877-2938936	60	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	483791-483850	13	0.783
NZ_CP021169_3	3.1\|2938877\|60\|NZ_CP021169\|CRISPRCasFinder	2938877-2938936	60	NZ_LR134399	Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence	57361-57420	14	0.767

1. spacer 3.1|2938877|60|NZ_CP021169|CRISPRCasFinder matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

2. spacer 3.1|2938877|60|NZ_CP021169|CRISPRCasFinder matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

3. spacer 3.1|2938877|60|NZ_CP021169|CRISPRCasFinder matches to NC_017139 (Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

4. spacer 3.1|2938877|60|NZ_CP021169|CRISPRCasFinder matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

5. spacer 3.1|2938877|60|NZ_CP021169|CRISPRCasFinder matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

6. spacer 3.1|2938877|60|NZ_CP021169|CRISPRCasFinder matches to NC_020451 (Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence) position: , mismatch: 9, identity: 0.85

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcattttagttatggcccggg	Protospacer
****************************************** ***   * ***  **.

7. spacer 3.1|2938877|60|NZ_CP021169|CRISPRCasFinder matches to NZ_CP015440 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence) position: , mismatch: 12, identity: 0.8

cagcttggaaggctgaggttttaccactaaactacacccgca-------atttttatttg	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcataataatatataccattg	Protospacer
******************************************       ** * .  ***

8. spacer 3.1|2938877|60|NZ_CP021169|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 13, identity: 0.783

cagcttggaaggctgaggttttaccactaaactacacccgc--------aatttttattt	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatggttaaaagttttgcca	Protospacer
*****************************************        ** ****...

9. spacer 3.1|2938877|60|NZ_CP021169|CRISPRCasFinder matches to NZ_LR134399 (Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence) position: , mismatch: 14, identity: 0.767

cagcttggaaggctgaggttttaccactaaactacacccgc---------aatttttatt	CRISPR spacer
cagcttggaaggctgtagttttaccactaaactacacccgcatagtaagtagttcttagt	Protospacer
*************** .************************         *.**.*** *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

660873 : 669239

Synechococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014476028.1\|660873_662169_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.7e-18	25.4
WP_015715439.1\|662242_662968_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3G7P8	Synechococcus_phage	4.1e-46	44.1
WP_003219409.1\|662960_663215_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_014663062.1\|663211_663895_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_049140793.1\|663878_666107_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	8.5e-159	40.1
WP_003233947.1\|666082_667513_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.2e-52	32.5
WP_086343534.1\|667614_668655_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	8.2e-64	41.7
WP_021481301.1\|668651_669239_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	9.1e-28	40.4

DBSCAN-SWA_2

1141617 : 1185388

Planktothrix_phage(25.0%)

tRNA,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072173825.1\|1141617_1141854_-\|coat	spore coat protein YjzB	NA	NA	NA	NA
WP_003232971.1\|1142018_1142957_+	beta-ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_003244890.1\|1142979_1144221_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_086343701.1\|1144296_1145082_+	DUF2268 domain-containing protein	NA	NA	NA	NA
WP_003232965.1\|1145273_1146260_+	oligopeptide ABC transporter ATP-binding protein AppD	G9BWD6	Planktothrix_phage	5.7e-22	32.9
WP_014476428.1\|1146256_1147246_+	oligopeptide ABC transporter ATP-binding protein AppF	F2Y302	Organic_Lake_phycodnavirus	8.8e-07	26.1
WP_086343702.1\|1147333_1148965_+	peptide-binding protein	NA	NA	NA	NA
WP_086343703.1\|1149040_1149991_+	oligopeptide ABC transporter permease AppB	NA	NA	NA	NA
WP_086343704.1\|1150007_1150919_+	oligopeptide ABC transporter permease AppC	NA	NA	NA	NA
WP_003239298.1\|1151124_1151877_+	YjbA family protein	A0A0A0RP53	Bacillus_phage	5.4e-49	43.9
WP_086344582.1\|1151911_1152904_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_086343705.1\|1153647_1155285_+	oligopeptide ABC transporter substrate-binding protein OppA	NA	NA	NA	NA
WP_003245554.1\|1155392_1156328_+	oligopeptide ABC transporter permease OppB	NA	NA	NA	NA
WP_015252359.1\|1156331_1157249_+	oligopeptide ABC transporter permease OppC	NA	NA	NA	NA
WP_072173823.1\|1157253_1158330_+	oligopeptide ABC transporter ATP-binding protein OppD	G9BWD6	Planktothrix_phage	2.1e-17	30.8
WP_003245567.1\|1158331_1159249_+	oligopeptide ABC transporter ATP-binding protein OppF	M1HP82	Acanthocystis_turfacea_Chlorella_virus	1.2e-05	24.6
WP_086344583.1\|1159356_1160574_+	MFS transporter	NA	NA	NA	NA
WP_003224597.1\|1160737_1161316_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014476435.1\|1161496_1161892_+	transcriptional regulator Spx	NA	NA	NA	NA
WP_086343706.1\|1161923_1162592_-	TerC family protein	W8EBD0	Pseudomonas_phage	1.5e-29	39.5
WP_119122854.1\|1162761_1162902_+	hypothetical protein	NA	NA	NA	NA
WP_003245194.1\|1162868_1163525_+	adaptor protein MecA	NA	NA	NA	NA
WP_003245684.1\|1163519_1163642_-	hypothetical protein	NA	NA	NA	NA
WP_086343707.1\|1163685_1164837_+	competence protein CoiA	NA	NA	NA	NA
WP_003245178.1\|1165066_1166896_+	oligoendopeptidase F	NA	NA	NA	NA
WP_003244944.1\|1166933_1167101_-	hypothetical protein	NA	NA	NA	NA
WP_024573348.1\|1167415_1168315_-	adaptor protein SpxH	NA	NA	NA	NA
WP_003232928.1\|1168311_1168710_-	group 2 truncated hemoglobin YjbI	NA	NA	NA	NA
WP_080031064.1\|1168961_1169507_-	bifunctional muramidase/murein lytic transglycosylase	A0A1P8CWQ1	Bacillus_phage	4.8e-39	61.0
WP_015252351.1\|1169710_1170283_-	CYTH domain-containing protein	NA	NA	NA	NA
WP_024573346.1\|1170407_1170776_+	hypothetical protein	NA	NA	NA	NA
WP_003245294.1\|1170804_1171440_+	GTP diphosphokinase	NA	NA	NA	NA
WP_003232918.1\|1171458_1172259_+	NAD kinase	NA	NA	NA	NA
WP_014476443.1\|1172273_1173173_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_024573345.1\|1173185_1173920_-	bis(5'-nucleosyl)-tetraphosphatase PrpE	M4Q4T6	Vibrio_phage	2.5e-06	23.3
WP_038828799.1\|1174154_1175999_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA
WP_014476446.1\|1176247_1176958_+	thiaminase II	NA	NA	NA	NA
WP_015715674.1\|1176932_1177550_+	thiazole tautomerase TenI	NA	NA	NA	NA
WP_029726273.1\|1177533_1178643_+	glycine oxidase ThiO	NA	NA	NA	NA
WP_072173897.1\|1178642_1178843_+	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_010886483.1\|1178839_1179610_+	thiazole synthase	NA	NA	NA	NA
WP_086343709.1\|1179606_1180617_+	thiazole biosynthesis adenylyltransferase ThiF	NA	NA	NA	NA
WP_003245050.1\|1180635_1181451_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_003232896.1\|1181586_1182363_+	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_080265338.1\|1182463_1183147_+\|coat	spore coat protein CotO	NA	NA	NA	NA
WP_003244982.1\|1183239_1183686_-\|coat	spore coat protein CotZ	NA	NA	NA	NA
WP_003239243.1\|1183813_1184302_-\|coat	spore coat protein CotY	NA	NA	NA	NA
WP_003244668.1\|1184453_1184972_-\|coat	spore coat protein CotX	NA	NA	NA	NA
WP_024572403.1\|1185073_1185388_-\|coat	spore coat protein CotW	NA	NA	NA	NA

DBSCAN-SWA_3

1206370 : 1270521

Bacillus_phage(30.3%)

coat,tRNA,holin,portal,terminase,plate,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086343718.1\|1206370_1206850_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_024572451.1\|1206890_1207085_-	DUF4177 domain-containing protein	NA	NA	NA	NA
WP_086343719.1\|1207250_1207580_-	YjdJ family protein	NA	NA	NA	NA
WP_086344586.1\|1208199_1209189_-	protoheme IX farnesyltransferase	NA	NA	NA	NA
WP_029946224.1\|1209311_1209557_-\|coat	spore coat protein CotT	NA	NA	NA	NA
WP_038428808.1\|1209810_1211214_+	peptidoglycan-N-acetylmuramic acid deacetylase PdaC	NA	NA	NA	NA
WP_015252313.1\|1211253_1211718_-	YjfA family protein	NA	NA	NA	NA
WP_014476499.1\|1211851_1212019_-	YjfB family protein	NA	NA	NA	NA
WP_032725487.1\|1212144_1213044_+	DUF2268 domain-containing protein	NA	NA	NA	NA
WP_086344587.1\|1213053_1213452_-	DUF2809 domain-containing protein	NA	NA	NA	NA
WP_086343720.1\|1213552_1214128_-	YjgB family protein	NA	NA	NA	NA
WP_086343721.1\|1214273_1217231_+	formate dehydrogenase subunit alpha	NA	NA	NA	NA
WP_086343722.1\|1217223_1217784_+	DUF1641 domain-containing protein	NA	NA	NA	NA
WP_086343723.1\|1218197_1218815_+	NUDIX hydrolase	NA	NA	NA	NA
WP_003232791.1\|1218845_1219124_-	hypothetical protein	NA	NA	NA	NA
WP_086343724.1\|1219512_1220703_+	monooxygenase YjiB	NA	NA	NA	NA
WP_086343725.1\|1220725_1221904_+	UDP-glucosyltransferase	Q0IKX4	Leucania_separata_nucleopolyhedrovirus	3.3e-08	28.3
WP_003232781.1\|1221944_1222133_-	hypothetical protein	A0A1P8CWV7	Bacillus_phage	3.4e-21	77.6
WP_086343726.1\|1222306_1223119_+	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_003232776.1\|1223164_1223917_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_041333936.1\|1223916_1224669_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.4e-18	31.4
WP_033884358.1\|1225508_1226006_+	cupin domain-containing protein	NA	NA	NA	NA
WP_003220510.1\|1226394_1226817_+	DUF1641 domain-containing protein	NA	NA	NA	NA
WP_086343727.1\|1226856_1228035_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_086344588.1\|1228232_1229654_+	glucuronate isomerase	NA	NA	NA	NA
WP_086343728.1\|1229721_1231101_+	MFS transporter	NA	NA	NA	NA
WP_086343729.1\|1231205_1232219_+	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_086343730.1\|1232224_1233244_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_086343731.1\|1233268_1234348_+	mannonate dehydratase	NA	NA	NA	NA
WP_086343732.1\|1234344_1235181_+	SDR family oxidoreductase	M1NMS3	Moumouvirus	2.7e-09	30.4
WP_029946346.1\|1235228_1236497_+	MFS transporter	NA	NA	NA	NA
WP_015383414.1\|1236584_1237586_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_086343733.1\|1237660_1239103_+	tagaturonate reductase	NA	NA	NA	NA
WP_086343734.1\|1239099_1240593_+	altronate dehydratase	NA	NA	NA	NA
WP_014476525.1\|1240631_1241396_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_014479541.1\|1241620_1242085_-	DinB family protein	NA	NA	NA	NA
WP_003245490.1\|1242233_1243505_+	ATPase YjoB	A0A1V0SEI6	Indivirus	8.6e-15	37.1
WP_015252291.1\|1243650_1244787_+	response regulator aspartate phosphatase RapA	A0A1P8CWN8	Bacillus_phage	4.9e-94	47.4
WP_003245487.1\|1244776_1244911_+	phosphatase RapA inhibitor PhrA	NA	NA	NA	NA
WP_041344765.1\|1244940_1245198_-	YciI family protein	NA	NA	NA	NA
WP_017695144.1\|1245318_1246272_+	N-acetylmuramoyl-L-alanine amidase	A0A218KC88	Bacillus_phage	1.6e-66	73.5
WP_014479546.1\|1246311_1246689_-	PH domain-containing protein	A5GYQ0	Lactococcus_phage	7.9e-17	42.3
WP_041344770.1\|1246794_1247397_+	poly-gamma-glutamate hydrolase family protein	F8WQ53	Bacillus_phage	3.8e-45	49.2
WP_003245071.1\|1247473_1248310_+	manganese catalase family protein	NA	NA	NA	NA
WP_015715727.1\|1248353_1248950_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	8.1e-40	51.7
WP_017695142.1\|1249112_1249454_-	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	4.5e-19	46.6
WP_015715728.1\|1249632_1249812_+	hypothetical protein	NA	NA	NA	NA
WP_086343735.1\|1249798_1250635_+\|portal	phage portal protein	S6BFM4	Thermus_phage	3.9e-24	27.8
WP_080009791.1\|1250534_1251335_+	ATP-binding protein	A6XMI1	Bacillus_virus	3.8e-61	52.2
WP_003245588.1\|1251334_1251502_+	hypothetical protein	NA	NA	NA	NA
WP_021479479.1\|1251586_1251937_+	phage-like element PBSX protein XkdD	NA	NA	NA	NA
WP_003244900.1\|1251933_1252140_+	phage-like element PBSX protein XtrA	A0A2H4J4M6	uncultured_Caudovirales_phage	1.6e-11	50.0
WP_086343736.1\|1252255_1252765_+	sigma-70 family RNA polymerase sigma factor	A0A1L2JY33	Aeribacillus_phage	1.1e-21	38.6
WP_019712461.1\|1252879_1253677_+\|terminase	terminase small subunit	A0A0S2MVB6	Bacillus_phage	2.7e-59	51.0
WP_019712462.1\|1253673_1254975_+\|terminase	PBSX family phage terminase large subunit	A0A2P1JTW5	Anoxybacillus_phage	1.1e-153	60.5
WP_029317667.1\|1254978_1256466_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	1.7e-139	55.5
WP_015483125.1\|1256485_1257313_+	phage-like element PBSX protein XkdF	A0A1B1P7E4	Bacillus_phage	9.5e-55	59.2
WP_024572591.1\|1257338_1258274_+\|capsid	phage major capsid protein	A0A1B1P7E3	Bacillus_phage	8.6e-105	63.8
WP_086343737.1\|1258295_1258679_+	DUF3199 family protein	A0A1B1P7D6	Bacillus_phage	2.9e-14	41.1
WP_086343738.1\|1258675_1259032_+	YqbH/XkdH family protein	NA	NA	NA	NA
WP_024572797.1\|1259028_1259514_+	HK97 gp10 family phage protein	A0A249XXA4	Clostridium_phage	2.1e-38	47.0
WP_024572798.1\|1259526_1259967_+	hypothetical protein	NA	NA	NA	NA
WP_003232679.1\|1259970_1260189_+	hypothetical protein	NA	NA	NA	NA
WP_003245369.1\|1260185_1261586_+	phage-like element PBSX protein XkdK	A0A0A7S087	Clostridium_phage	2.3e-77	39.3
WP_003239114.1\|1261587_1262031_+\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	1.1e-25	45.2
WP_003245730.1\|1263893_1264871_+	phage-like element PBSX protein XkdQ	H7BV96	unidentified_phage	1.0e-39	32.6
WP_003244812.1\|1264870_1265137_+	DUF2577 family protein	S6C459	Thermus_phage	1.7e-05	36.4
WP_003232671.1\|1265194_1265620_+	DUF2634 domain-containing protein	A0A2H4J6K5	uncultured_Caudovirales_phage	7.8e-13	38.0
WP_024573155.1\|1265612_1266659_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	6.3e-72	44.0
WP_014476551.1\|1266642_1267221_+	YmfQ family protein	A0A2H4J717	uncultured_Caudovirales_phage	3.9e-15	34.2
WP_015715738.1\|1267217_1267490_+	hypothetical protein	NA	NA	NA	NA
WP_041850927.1\|1267969_1268134_+	XkdX family protein	A0A2H4JAA1	uncultured_Caudovirales_phage	7.2e-15	66.0
WP_041850926.1\|1268177_1269017_+	phage-like element PBSX protein XepA	NA	NA	NA	NA
WP_003232655.1\|1269069_1269339_+	hemolysin XhlA family protein	A0A2H4JD40	uncultured_Caudovirales_phage	6.2e-24	64.8
WP_003232653.1\|1269351_1269615_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	4.7e-24	65.5
WP_041850925.1\|1269627_1270521_+	N-acetylmuramoyl-L-alanine amidase	Q9ZXD7	Bacillus_phage	5.2e-83	69.2

DBSCAN-SWA_4

1787007 : 1793560

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003231758.1\|1787007_1787400_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	G3MBF1	Bacillus_virus	2.5e-29	58.3
WP_038828297.1\|1787359_1789462_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	U5PY35	Bacillus_phage	0.0e+00	86.8
WP_003231754.1\|1789479_1790469_+	class 1b ribonucleoside-diphosphate reductase subunit beta	F8WQ21	Bacillus_phage	1.9e-155	83.5
WP_003245105.1\|1790518_1791139_+	hypothetical protein	A0A127AYS1	Bacillus_phage	1.6e-46	48.4
WP_086343862.1\|1791202_1791967_-	sporulation-specific N-acetylmuramoyl-L-alanine amidase	E5DV68	Deep-sea_thermophilic_phage	1.5e-51	49.5
WP_003231746.1\|1792591_1793560_+	stage V sporulation protein K	G3MAX6	Bacillus_virus	5.2e-52	40.5

DBSCAN-SWA_5

2052302 : 2096278

Bacillus_phage(100.0%)

integrase

attL 2083460:2083475|attR 2093990:2094005

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_026009816.1\|2052302_2052545_+	helix-turn-helix transcriptional regulator	A0A1P8CX60	Bacillus_phage	2.1e-39	97.5
WP_086344603.1\|2052546_2052732_-	hypothetical protein	O64193	Bacillus_phage	4.3e-24	91.8
WP_086343953.1\|2052951_2053779_-	metallophosphoesterase	O64184	Bacillus_phage	5.2e-162	95.6
WP_009967454.1\|2053897_2054116_+	acid-soluble spore protein SspC	Q77YX0	Bacillus_phage	5.6e-31	100.0
WP_086343954.1\|2054154_2054508_-	hypothetical protein	A0A1P8CX43	Bacillus_phage	9.7e-33	64.1
WP_086343955.1\|2054520_2054811_-	hypothetical protein	O64180	Bacillus_phage	4.1e-37	87.6
WP_004399585.1\|2054811_2054979_-	hypothetical protein	A0A1P8CX64	Bacillus_phage	1.8e-21	88.9
WP_017697105.1\|2055134_2055377_-	thiol reductase thioredoxin	A0A1P8CX24	Bacillus_phage	2.2e-36	93.8
WP_086343957.1\|2055957_2056479_-	HNH endonuclease	A0A1P8CX39	Bacillus_phage	2.6e-95	97.1
WP_150132544.1\|2059142_2059820_-	ribonucleotide-diphosphate reductase subunit alpha	A0A1P8CX40	Bacillus_phage	4.3e-122	98.7
WP_150132540.1\|2059827_2060223_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A1P8CX56	Bacillus_phage	5.3e-64	94.7
WP_004399360.1\|2060323_2060518_-	hypothetical protein	O64169	Bacillus_phage	7.6e-32	100.0
WP_004399476.1\|2060537_2060672_-	hypothetical protein	O64168	Bacillus_phage	2.5e-18	100.0
WP_086343960.1\|2060825_2061173_-	hypothetical protein	O64164	Bacillus_phage	6.3e-53	93.9
WP_086343961.1\|2061187_2061583_-	hypothetical protein	O64163	Bacillus_phage	1.9e-69	95.4
WP_059293332.1\|2061698_2061926_-	hypothetical protein	A0A1P8CX31	Bacillus_phage	9.9e-31	88.0
WP_086343962.1\|2061957_2062791_-	deoxynucleoside kinase	A0A1P8CX28	Bacillus_phage	2.2e-75	94.6
WP_061187797.1\|2062790_2062946_-	hypothetical protein	A0A1P8CX36	Bacillus_phage	1.3e-21	94.1
WP_086343963.1\|2062938_2063154_-	YorP family protein	O64150	Bacillus_phage	8.7e-37	95.8
WP_086343964.1\|2063473_2063854_-	hypothetical protein	A0A1P8CX06	Bacillus_phage	6.5e-67	99.2
WP_019712320.1\|2063916_2064213_-	hypothetical protein	O64136	Bacillus_phage	3.1e-48	99.0
WP_086343965.1\|2064300_2066061_-	right-handed parallel beta-helix repeat-containing protein	O64135	Bacillus_phage	0.0e+00	97.6
WP_086343966.1\|2066057_2066882_-	gamma-polyglutamate hydrolase PghZ	O64134	Bacillus_phage	9.5e-148	98.9
WP_086343967.1\|2066955_2067177_-	hypothetical protein	A0A1P8CWZ6	Bacillus_phage	5.6e-31	90.4
WP_086343968.1\|2067247_2067922_+	SOS response-associated peptidase	A0A1P8CX02	Bacillus_phage	1.0e-78	98.6
WP_003231051.1\|2068892_2069183_-	hypothetical protein	A0A1P8CWY9	Bacillus_phage	4.2e-50	100.0
WP_086343969.1\|2069296_2069671_+	YoqO family protein	A0A1P8CWZ2	Bacillus_phage	9.8e-60	99.2
WP_086343970.1\|2069687_2069903_-	hypothetical protein	A0A1P8CX01	Bacillus_phage	1.4e-26	85.9
WP_086343971.1\|2070644_2070923_-	hypothetical protein	A0A1P8CWX5	Bacillus_phage	3.6e-43	92.4
WP_069684684.1\|2071004_2071136_-	hypothetical protein	A0A1P8CWV9	Bacillus_phage	2.7e-17	93.0
WP_086343972.1\|2071146_2071362_-	hypothetical protein	O64089	Bacillus_phage	9.4e-31	95.8
WP_086343973.1\|2071365_2071617_-	hypothetical protein	A0A1P8CWV6	Bacillus_phage	1.5e-35	95.2
WP_086344605.1\|2071725_2071866_+	hypothetical protein	A0A1P8CWV7	Bacillus_phage	7.4e-21	97.8
WP_069684683.1\|2072638_2072797_-	hypothetical protein	A0A1P8CWU3	Bacillus_phage	2.1e-08	63.5
WP_086343974.1\|2072841_2073093_-	hypothetical protein	A0A1P8CWU4	Bacillus_phage	2.9e-31	100.0
WP_017696861.1\|2073111_2073288_-	hypothetical protein	O64080	Bacillus_phage	4.4e-10	92.3
WP_004399274.1\|2075819_2076098_+	HU-related DNA-binding protein HupN	A0A1P8CWT5	Bacillus_phage	1.2e-30	76.9
WP_010328101.1\|2076914_2077106_+	YonK family protein	A0A1P8CWT3	Bacillus_phage	1.9e-27	100.0
WP_061187728.1\|2077122_2078340_+	hypothetical protein	A0A1P8CWS1	Bacillus_phage	6.4e-225	97.3
WP_086343975.1\|2078431_2078932_+	hypothetical protein	A0A1P8CWS3	Bacillus_phage	1.4e-85	96.4
WP_086343976.1\|2079034_2079955_+	hypothetical protein	A0A1P8CWS6	Bacillus_phage	6.2e-172	97.1
WP_003230970.1\|2079941_2081711_+	hypothetical protein	O64069	Bacillus_phage	0.0e+00	99.8
WP_086343977.1\|2081728_2083249_+	hypothetical protein	O64068	Bacillus_phage	6.6e-280	98.8
WP_086343978.1\|2083279_2084716_+	hypothetical protein	A0A1P8CWR1	Bacillus_phage	6.3e-264	98.3
2083460:2083475	attL	NA	NA	NA	NA
WP_086343979.1\|2084740_2085277_+	hypothetical protein	A0A1P8CWS2	Bacillus_phage	3.9e-94	98.9
WP_041337005.1\|2085315_2086332_+	hypothetical protein	A0A1P8CWR9	Bacillus_phage	2.9e-186	99.7
WP_019712890.1\|2086367_2086838_+	hypothetical protein	A0A1P8CWS5	Bacillus_phage	1.1e-81	99.4
WP_004399452.1\|2086852_2087248_+	hypothetical protein	A0A1P8CWR5	Bacillus_phage	2.5e-69	100.0
WP_086343980.1\|2087244_2087499_+	hypothetical protein	A0A1P8CWS7	Bacillus_phage	3.8e-39	98.8
WP_003230958.1\|2087482_2088133_+	hypothetical protein	A0A1P8CWR8	Bacillus_phage	3.2e-122	100.0
WP_019712889.1\|2088129_2088636_+	hypothetical protein	O64060	Bacillus_phage	2.9e-91	99.4
WP_003230954.1\|2088632_2089343_+	hypothetical protein	A0A1P8CWQ7	Bacillus_phage	1.8e-131	100.0
WP_086343981.1\|2089385_2090183_+	hypothetical protein	A0A1P8CWR0	Bacillus_phage	6.7e-90	76.2
WP_086343982.1\|2090200_2090812_+	hypothetical protein	A0A1P8CWQ5	Bacillus_phage	1.8e-58	95.1
WP_009967521.1\|2090811_2091039_+	hypothetical protein	A0A1P8CWR2	Bacillus_phage	6.4e-38	100.0
WP_086343983.1\|2091922_2092423_+	hypothetical protein	A0A1P8CWQ6	Bacillus_phage	4.1e-85	97.6
WP_086343984.1\|2092406_2092826_+	hypothetical protein	A0A1P8CWQ4	Bacillus_phage	5.1e-65	93.5
WP_033885229.1\|2092839_2093841_+\|integrase	site-specific integrase	A0A1P8CWP6	Bacillus_phage	2.6e-192	99.1
WP_042976264.1\|2094225_2094912_-	hypothetical protein	O64048	Bacillus_phage	1.5e-122	97.4
2093990:2094005	attR	NA	NA	NA	NA
WP_009966645.1\|2094936_2095113_-	hypothetical protein	NA	NA	NA	NA
WP_086343985.1\|2095594_2096278_+	immunity protein	Q37974	Bacillus_phage	3.2e-109	93.8

DBSCAN-SWA_6

2103822 : 2113889

Bacillus_phage(90.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086343986.1\|2103822_2105091_-	UV damage repair protein UvrX	O64031	Bacillus_phage	2.0e-229	95.9
WP_086343987.1\|2105083_2105416_-	YolD-like family protein	A0A1P8CWP2	Bacillus_phage	1.8e-49	90.9
WP_019712872.1\|2105678_2106212_-	GNAT family N-acetyltransferase	O64026	Bacillus_phage	4.0e-99	98.9
WP_086343988.1\|2106247_2106826_-	SMI1/KNR4 family protein	O64025	Bacillus_phage	1.5e-99	92.2
WP_086343989.1\|2106889_2107387_-	SMI1/KNR4 family protein	O64024	Bacillus_phage	2.8e-94	98.2
WP_086343990.1\|2109120_2110011_+	endonuclease YokF	A0A1P8CWK6	Bacillus_phage	1.4e-112	92.2
WP_086343991.1\|2110024_2110507_+	PH domain-containing protein	O64019	Bacillus_phage	4.8e-83	98.8
WP_004399070.1\|2110808_2111627_+	AAC(3) family N-acetyltransferase	O64018	Bacillus_phage	1.9e-156	100.0
WP_004398929.1\|2111646_2111781_-	hypothetical protein	NA	NA	NA	NA
WP_003246211.1\|2111941_2112097_-	hypothetical protein	NA	NA	NA	NA
WP_004398503.1\|2112276_2112792_-	hypothetical protein	O64017	Bacillus_phage	2.0e-95	100.0
WP_086343992.1\|2113244_2113889_+	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.5e-18	31.2

DBSCAN-SWA_7

2251555 : 2257651

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003223904.1\|2251555_2252149_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.0e-14	35.4
WP_046381501.1\|2252138_2252894_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	7.2e-09	29.2
WP_086344032.1\|2253174_2253699_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_003223910.1\|2253712_2254087_-	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA
WP_003223915.1\|2254199_2254664_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.5e-44	60.0
WP_003230496.1\|2254696_2255893_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	5.3e-115	54.9
WP_014480161.1\|2255907_2256555_-	riboflavin synthase subunit alpha	A0A2H4PQS5	Staphylococcus_phage	8.5e-43	45.9
WP_086344033.1\|2256565_2257651_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	5.1e-56	36.1

DBSCAN-SWA_8

2599729 : 2653045

uncultured_Mediterranean_phage(12.5%)

tRNA,protease,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003229725.1\|2599729_2600875_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	3.4e-87	44.0
WP_003229723.1\|2600901_2601930_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_003222669.1\|2601959_2602160_-	DUF2905 domain-containing protein	NA	NA	NA	NA
WP_003229718.1\|2602152_2603157_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.1e-07	30.8
WP_003229717.1\|2603167_2603773_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_003229715.1\|2603911_2604424_-	sporulation cell-cell signaling protein BofC	NA	NA	NA	NA
WP_086344147.1\|2604471_2605779_-	MFS transporter	NA	NA	NA	NA
WP_086344148.1\|2605849_2606875_-	inositol 2-dehydrogenase	NA	NA	NA	NA
WP_038429400.1\|2607112_2607760_+	serine/threonine protein kinase	A0A2R3ZQF2	Marseillevirus	5.4e-05	26.3
WP_124058787.1\|2607805_2607928_-	hypothetical protein	NA	NA	NA	NA
WP_019712583.1\|2608079_2608304_+	hypothetical protein	NA	NA	NA	NA
WP_029727127.1\|2608310_2608451_+	hypothetical protein	NA	NA	NA	NA
WP_086344149.1\|2608614_2610069_+	alanine:cation symporter family protein	NA	NA	NA	NA
WP_041339264.1\|2610108_2610831_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003245996.1\|2610933_2611530_-	spore germination protein SgpA	NA	NA	NA	NA
WP_086344150.1\|2611677_2612841_-\|coat	spore coat assembly protein SafA	NA	NA	NA	NA
WP_086344151.1\|2612957_2614064_-	quinolinate synthase NadA	NA	NA	NA	NA
WP_086344152.1\|2614050_2614920_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_086344153.1\|2614873_2616469_-	L-aspartate oxidase	NA	NA	NA	NA
WP_086344154.1\|2616571_2617759_+	cysteine desulfurase NifS	A0A141ZJV0	Faustovirus	1.3e-33	27.4
WP_086344155.1\|2617718_2618261_+	transcription repressor NadR	NA	NA	NA	NA
WP_014477545.1\|2618284_2619142_-	prephenate dehydratase	NA	NA	NA	NA
WP_003222630.1\|2619158_2619602_-	transcriptional regulator ThrR	NA	NA	NA	NA
WP_003229675.1\|2619662_2620949_-	GTPase ObgE	NA	NA	NA	NA
WP_014480451.1\|2620982_2621561_-	sporulation initiation phosphotransferase Sop0B	NA	NA	NA	NA
WP_003229671.1\|2621638_2621761_+	hypothetical protein	NA	NA	NA	NA
WP_003222623.1\|2621881_2622166_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_086344156.1\|2622178_2622517_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_003229668.1\|2622519_2622828_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_024572737.1\|2622974_2623841_-	stage IV sporulation protein SpoIVFB	NA	NA	NA	NA
WP_004398684.1\|2623833_2624628_-	stage IV sporulation protein SpoIVFA	NA	NA	NA	NA
WP_004398624.1\|2624776_2625583_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_029318187.1\|2625584_2626265_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_004398811.1\|2626317_2626836_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_003222609.1\|2626832_2627705_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_003229650.1\|2627735_2628749_-	rod shape-determining protein MreB	NA	NA	NA	NA
WP_014480455.1\|2628840_2629536_-	DNA repair protein RadC	NA	NA	NA	NA
WP_024572904.1\|2629572_2630142_-	septum formation protein Maf	NA	NA	NA	NA
WP_086344157.1\|2630294_2631293_-	stage II sporulation protein SpoIIB	NA	NA	NA	NA
WP_080474433.1\|2631426_2632173_-	prepilin peptidase	NA	NA	NA	NA
WP_041339279.1\|2632313_2633606_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_017697542.1\|2633665_2636308_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	3.7e-161	42.6
WP_003222590.1\|2636755_2636947_+	hypothetical protein	NA	NA	NA	NA
WP_076458222.1\|2636965_2637991_-\|coat	spore coat protein CotN	NA	NA	NA	NA
WP_086344158.1\|2638023_2639751_-\|coat	spore coat morphogenetic protein SpoVID	NA	NA	NA	NA
WP_015251539.1\|2639881_2641174_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_015483525.1\|2641203_2642178_-	porphobilinogen synthase	NA	NA	NA	NA
WP_086344159.1\|2642174_2642963_-	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_086344160.1\|2642952_2643897_-	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_003222575.1\|2643929_2644760_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_004399038.1\|2644767_2646135_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_003229624.1\|2646364_2646862_+	hypothetical protein	NA	NA	NA	NA
WP_003229621.1\|2646883_2647471_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_086344161.1\|2647467_2649792_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	2.0e-182	43.7
WP_004398923.1\|2649972_2651631_-\|protease	ATP-dependent protease LonB	A0A1V0SHJ7	Hokovirus	8.1e-05	33.7
WP_003229613.1\|2651782_2653045_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.3e-148	64.9

DBSCAN-SWA_9

3223660 : 3231373

Organic_Lake_phycodnavirus(50.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086344323.1\|3223660_3224299_-\|holin	choline ABC transporter permease OpuBD	NA	NA	NA	NA
WP_017695163.1\|3224315_3225236_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_086344324.1\|3225247_3225901_-\|holin	choline ABC transporter permease OpuBB	NA	NA	NA	NA
WP_086344325.1\|3225917_3227063_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	1.0e-14	32.2
WP_024571735.1\|3227346_3227880_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
WP_014478003.1\|3227931_3228606_-\|holin	glycine betaine/carnitine/choline/choline sulfate ABC transporter permease OpuCD	NA	NA	NA	NA
WP_082201019.1\|3228623_3229490_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003228349.1\|3229554_3230208_-\|holin	glycine betaine/carnitine/choline/choline sulfate ABC transporter permease OpuCB	NA	NA	NA	NA
WP_003243370.1\|3230230_3231373_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	6.2e-12	29.3

DBSCAN-SWA_10

3563738 : 3638787

Bacillus_phage(26.67%)

protease,tRNA,bacteriocin,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003227570.1\|3563738_3565409_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_003243604.1\|3565405_3565834_-	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_003222002.1\|3566146_3566278_+\|bacteriocin	subtilosin A family bacteriocin	NA	NA	NA	NA
WP_010886632.1\|3566234_3566387_+\|bacteriocin	bacteriocin-like protein SboX	NA	NA	NA	NA
WP_038829820.1\|3566411_3567758_+	subtilosin maturase AlbA	NA	NA	NA	NA
WP_003222006.1\|3567770_3567932_+\|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbB	NA	NA	NA	NA
WP_003227564.1\|3567928_3568648_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.3e-19	27.2
WP_046381398.1\|3568640_3569951_+\|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbD	NA	NA	NA	NA
WP_086344631.1\|3569940_3571101_+	insulinase family protein	NA	NA	NA	NA
WP_086344438.1\|3571105_3572386_+	insulinase family protein	NA	NA	NA	NA
WP_003243391.1\|3572382_3573084_+\|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	NA	NA	NA	NA
WP_086344439.1\|3573089_3574466_-	YncE family protein	NA	NA	NA	NA
WP_086344440.1\|3574505_3575861_-	YncE family protein	NA	NA	NA	NA
WP_086344441.1\|3576090_3577236_+	response regulator aspartate phosphatase RapF	A0A1P8CWN8	Bacillus_phage	2.2e-78	43.5
WP_041334633.1\|3577219_3577339_+	phosphatase RapF inhibitor PhrF	NA	NA	NA	NA
WP_003227545.1\|3577940_3578813_-	agmatinase	NA	NA	NA	NA
WP_003227543.1\|3578873_3579704_-	spermidine synthase	NA	NA	NA	NA
WP_015384942.1\|3579905_3581981_+	penicillin-binding protein	NA	NA	NA	NA
WP_015250981.1\|3582273_3582792_-	YwhD family protein	NA	NA	NA	NA
WP_003243167.1\|3582805_3583465_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_003222038.1\|3583573_3583762_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_003242889.1\|3583804_3584224_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_086344442.1\|3584343_3586260_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.6e-142	42.6
WP_150132543.1\|3586876_3587026_-	hypothetical protein	NA	NA	NA	NA
WP_086344443.1\|3587097_3588507_-	MFS transporter	NA	NA	NA	NA
WP_017696247.1\|3588506_3588977_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_003227524.1\|3589088_3589589_-	YwgA family protein	NA	NA	NA	NA
WP_024571616.1\|3589624_3590926_-	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	4.2e-25	28.9
WP_003222050.1\|3591087_3591312_-	DUF1450 domain-containing protein	NA	NA	NA	NA
WP_019712820.1\|3591527_3592304_+	prespore-specific transcription regulator RsfA	A0A1D6X8E5	Bacillus_phage	7.6e-06	50.0
WP_064671821.1\|3592447_3593338_-	DMT family transporter	NA	NA	NA	NA
WP_024571618.1\|3593505_3594351_-	octanoyl-[GcvH]:protein N-octanoyltransferase	NA	NA	NA	NA
WP_014481233.1\|3594399_3595299_-	cysJI operon transcriptional regulator CysL	A0A2H4J8I9	uncultured_Caudovirales_phage	3.6e-07	42.5
WP_003235941.1\|3595445_3596417_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_003227507.1\|3596686_3597451_+	heme-dependent peroxidase	NA	NA	NA	NA
WP_029726228.1\|3597583_3598363_+	NADPH-dependent reductase BacG	NA	NA	NA	NA
WP_080529926.1\|3598377_3599577_-	transaminase BacF	NA	NA	NA	NA
WP_014481236.1\|3599577_3600762_-	bacilysin exporter BacE	NA	NA	NA	NA
WP_024571622.1\|3600758_3602177_-	alanine--anticapsin ligase	NA	NA	NA	NA
WP_024571623.1\|3602195_3602957_-	dihydroanticapsin 7-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	1.7e-21	30.9
WP_003244300.1\|3602959_3603667_-	3-((4R)-4-hydroxycyclohexa-1, 5-dien-1-yl)-2-oxopropanoate isomerase	NA	NA	NA	NA
WP_086344444.1\|3603656_3604271_-	prephenate decarboxylase	NA	NA	NA	NA
WP_086344445.1\|3604422_3605661_-	MFS transporter	NA	NA	NA	NA
WP_029318679.1\|3605870_3607283_-	amino acid permease	NA	NA	NA	NA
WP_086344446.1\|3607282_3608983_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_086344447.1\|3609056_3610604_-	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_015250966.1\|3610830_3612105_-	glutamate dehydrogenase	NA	NA	NA	NA
WP_003227472.1\|3612283_3612748_-	biofilm-surface layer protein BslB	NA	NA	NA	NA
WP_014481242.1\|3613071_3613527_-	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	NA	NA	NA
WP_015250965.1\|3613519_3614371_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.7e-38	38.9
WP_086344448.1\|3614384_3615332_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.4e-72	43.8
WP_014478328.1\|3615331_3616072_-	NTP transferase domain-containing protein	I7I009	Enterobacteria_phage	4.5e-48	41.9
WP_086344449.1\|3616096_3617116_-\|coat	spore coat protein	NA	NA	NA	NA
WP_003243421.1\|3617118_3617841_-\|coat	spore coat polysaccharide biosynthesis protein SpsF	NA	NA	NA	NA
WP_015384970.1\|3617833_3618955_-\|coat	spore coat biosynthesis protein SpsE	NA	NA	NA	NA
WP_086344450.1\|3618954_3619824_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_086344451.1\|3619824_3620994_-	DegT/DnrJ/EryC1/StrS aminotransferase family protein	A0A1D8KU11	Synechococcus_phage	8.5e-17	27.2
WP_086344452.1\|3621014_3622439_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA
WP_086344453.1\|3622443_3623214_-\|coat	spore coat dTDP-glycosyltransferase SpsA	A0A0F7L2F7	uncultured_marine_virus	1.3e-05	28.6
WP_003227448.1\|3623533_3624079_+\|coat	spore coat protein GerQ	NA	NA	NA	NA
WP_003227446.1\|3624122_3624494_-	DUF423 domain-containing protein	NA	NA	NA	NA
WP_015384975.1\|3624555_3625878_-	purine/pyrimidine permease	NA	NA	NA	NA
WP_124059380.1\|3625897_3626215_-	YwdI family protein	NA	NA	NA	NA
WP_086344455.1\|3626382_3627753_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_003242965.1\|3627777_3628455_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	8.3e-49	46.1
WP_017696218.1\|3628468_3629275_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_014665830.1\|3629484_3630300_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_003243437.1\|3630390_3630639_-	hypothetical protein	NA	NA	NA	NA
WP_086344456.1\|3630732_3632172_-	sucrose-6-phosphate hydrolase	F8WPR5	Bacillus_phage	1.4e-21	27.3
WP_003227426.1\|3632168_3633554_-	PTS system sucrose transporter subunit IIBC	NA	NA	NA	NA
WP_014481261.1\|3633855_3634626_+	formate/nitrite transporter family protein	NA	NA	NA	NA
WP_086344457.1\|3634664_3635495_-	sac operon transcriptional antiterminator SacT	NA	NA	NA	NA
WP_003222155.1\|3635534_3635837_-	hypothetical protein	NA	NA	NA	NA
WP_086344458.1\|3636366_3638787_+\|protease	serine protease Vpr	A0A217EQY2	Bacillus_phage	5.3e-21	38.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP021169

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection