CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015964	Mycobacterium yongonense strain Asan 36912, complete genome	2 crisprs	DEDDh,cas3,csa3,DinG,cas4,WYL,c2c9_V-U4,PrimPol	1	1	3	0

1. NZ_CP015964

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015964_1

• CRISPR_ID: NZ_CP015964_1
• CRISPR_location: 2138941-2139006
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP015964_1

Consensus_repeat	Method
GCAGCCGGGCGCAGCGGGTCGCC	CRISPRCasFinder

spacers of NZ_CP015964_1

>1.1|2138964|20|NZ_CP015964|CRISPRCasFinder
GCGGGTCGCCACTAAAGGAT

CRISPR arrays and Neighbor proteins around NZ_CP015964_1

CRISPR arrays

The CRISPR arrays of NZ_CP015964_1

>merge|NZ_CP015964|1|2138941-2139006|CRISPRCasFinder
CAAGCGCGGCGCAGCCGGGCGCAGCGGGTCGCCACTAAAGGATGCAGCCGGGCGCAGCGGGTCGCC

>NZ_CP015964|1|1|2138941-2139006|CRISPRCasFinder
CAAGCGCGGCGCAGCCGGGCGCA	GCGGGTCGCCACTAAAGGAT
GCAGCCGGGCGCAGCGGGTCGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015964.1|WP_020822321.1|2128658_2130047_+|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl|CDD|366662
NZ_CP015964.1|WP_036455207.1|2150931_2152629_+|putative-lipid-II-flippase-FtsW	unknown	unknown	gnl|CDD|274232
NZ_CP015964.1|WP_036455203.1|2140038_2141289_+|hypothetical-protein	unknown	unknown	gnl|CDD|223021
NZ_CP015964.1|WP_036455201.1|2133445_2134495_-|polyprenyl-synthetase-family-protein	unknown	unknown	gnl|CDD|173833
NZ_CP015964.1|WP_036455204.1|2141285_2143361_+|penicillin-binding-protein-2	unknown	unknown	gnl|CDD|223839
NZ_CP015964.1|WP_036455202.1|2136480_2137089_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|223532
NZ_CP015964.1|WP_036455206.1|2149465_2150923_+|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	unknown	unknown	gnl|CDD|179571
NZ_CP015964.1|WP_036455205.1|2145277_2146846_+|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase	unknown	unknown	gnl|CDD|234660
NZ_CP015964.1|WP_020822322.1|2130125_2131343_-|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916
NZ_CP015964.1|WP_008256140.1|2148386_2149466_+|phospho-N-acetylmuramoyl-pentapeptide--transferase	unknown	unknown	gnl|CDD|234638
NZ_CP015964.1|WP_020822333.1|2144654_2145212_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|379883
NZ_CP015964.1|WP_008256120.1|2138259_2138691_+|division/cell-wall-cluster-transcriptional-repressor-MraZ	unknown	unknown	gnl|CDD|224912
NZ_CP015964.1|WP_020822325.1|2134756_2135653_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP015964.1|WP_008256119.1|2137415_2137820_+|DUF3040-domain-containing-protein	unknown	unknown	gnl|CDD|378610
NZ_CP015964.1|WP_008256138.1|2146842_2148390_+|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase	unknown	unknown	gnl|CDD|223841
NZ_CP015964.1|WP_008256113.1|2131495_2131900_+|hypothetical-protein	unknown	unknown	gnl|CDD|375793
NZ_CP015964.1|WP_020822323.1|2131893_2133441_-|alpha-(1-6)-mannopyranosyltransferase-A	unknown	unknown	gnl|CDD|274589
NZ_CP015964.1|WP_009953480.1|2135663_2136314_-|DUF3153-domain-containing-protein	unknown	unknown	unknown
NZ_CP015964.1|WP_020822332.1|2143412_2144543_-|monooxygenase-FAD-binding-protein	unknown	unknown	gnl|CDD|169028
NZ_CP015964.1|WP_020822329.1|2139061_2140039_+|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH	unknown	unknown	gnl|CDD|223352

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015964.1|WP_020822321.1|2128658_2130047_+|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl|CDD|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_CP015964.1|WP_036455207.1|2150931_2152629_+|putative-lipid-II-flippase-FtsW	gnl|CDD|274232	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW. This family consists of FtsW, an integral membrane protein with ten transmembrane segments. In general, it is one of two paralogs involved in peptidoglycan biosynthesis, the other being RodA, and is essential for cell division. All members of the seed alignment for this model are encoded in operons for the biosynthesis of UDP-N-acetylmuramoyl-pentapeptide, a precursor of murein (peptidoglycan). The FtsW designation is not used in endospore-forming bacterial (e.g. Bacillus subtilis), where the member of this family is designated SpoVE and three or more RodA/FtsW/SpoVE family paralogs are present. SpoVE acts in spore cortex formation and is dispensible for growth. Biological rolls for FtsW in cell division include recruitment of penicillin-binding protein 3 to the division site. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	5.1912e-148
NZ_CP015964.1|WP_036455203.1|2140038_2141289_+|hypothetical-protein	gnl|CDD|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	1.0933e-07
NZ_CP015964.1|WP_036455201.1|2133445_2134495_-|polyprenyl-synthetase-family-protein	gnl|CDD|173833	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze head-to-tail (HT) (1'-4) condensation reactions. This CD includes all-trans (E)-isoprenyl diphosphate synthases which synthesize various chain length (C10, C15, C20, C25, C30, C35, C40, C45, and C50) linear isoprenyl diphosphates from precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). They catalyze the successive 1'-4 condensation of the 5-carbon IPP to allylic substrates geranyl-, farnesyl-, or geranylgeranyl-diphosphate. Isoprenoid chain elongation reactions proceed via electrophilic alkylations in which a new carbon-carbon single bond is generated through interaction between a highly reactive electron-deficient allylic carbocation and an electron-rich carbon-carbon double bond. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DDXX(XX)D) located on opposite walls. These residues mediate binding of prenyl phosphates via bridging Mg2+ ions, inducing proposed conformational changes that close the active site to solvent, protecting and stabilizing reactive carbocation intermediates. Farnesyl diphosphate synthases produce the precursors of steroids, cholesterol, sesquiterpenes, farnsylated proteins, heme, and vitamin K12; and geranylgeranyl diphosphate and longer chain synthases produce the precursors of carotenoids, retinoids, diterpenes, geranylgeranylated chlorophylls, ubiquinone, and archaeal ether linked lipids. Isoprenyl diphosphate synthases are widely distributed among archaea, bacteria, and eukareya.	4.12387e-66
NZ_CP015964.1|WP_036455204.1|2141285_2143361_+|penicillin-binding-protein-2	gnl|CDD|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	6.10772e-164
NZ_CP015964.1|WP_036455202.1|2136480_2137089_-|GNAT-family-N-acetyltransferase	gnl|CDD|223532	COG0456, RimI, Acetyltransferases [General function prediction only].	7.44009e-13
NZ_CP015964.1|WP_036455206.1|2149465_2150923_+|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	gnl|CDD|179571	PRK03369, murD, UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase.	0
NZ_CP015964.1|WP_020822322.1|2130125_2131343_-|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.40838e-115
NZ_CP015964.1|WP_008256140.1|2148386_2149466_+|phospho-N-acetylmuramoyl-pentapeptide--transferase	gnl|CDD|234638	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional.	5.95226e-144
NZ_CP015964.1|WP_020822333.1|2144654_2145212_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	1.37002e-16
NZ_CP015964.1|WP_008256120.1|2138259_2138691_+|division/cell-wall-cluster-transcriptional-repressor-MraZ	gnl|CDD|224912	COG2001, COG2001, Uncharacterized protein conserved in bacteria [Function unknown].	4.19951e-66
NZ_CP015964.1|WP_036455205.1|2145277_2146846_+|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase	gnl|CDD|234660	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional.	0
NZ_CP015964.1|WP_008256119.1|2137415_2137820_+|DUF3040-domain-containing-protein	gnl|CDD|378610	pfam11239, DUF3040, Protein of unknown function (DUF3040). Some members in this family of proteins with unknown function are annotated as membrane proteins however this cannot be confirmed.	4.98973e-30
NZ_CP015964.1|WP_008256138.1|2146842_2148390_+|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase	gnl|CDD|223841	COG0770, MurF, UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane].	3.11182e-147
NZ_CP015964.1|WP_008256113.1|2131495_2131900_+|hypothetical-protein	gnl|CDD|375793	pfam18367, Rv2175c_C, Rv2175c C-terminal domain of unknown function. This is the C-terminal domain of unknown function found in actinomycetes such as M. tuberculosis Rv2175c. Rv2175c has a DNA binding activity and possesses a winged helix-turn-helix fold, furthermore it is identified as a substrate of the PknL kinase.	7.23227e-30
NZ_CP015964.1|WP_020822323.1|2131893_2133441_-|alpha-(1-6)-mannopyranosyltransferase-A	gnl|CDD|274589	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins found in the Actinobacteria. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).	0
NZ_CP015964.1|WP_020822332.1|2143412_2144543_-|monooxygenase-FAD-binding-protein	gnl|CDD|169028	PRK07588, PRK07588, FAD-binding domain.	2.47649e-78
NZ_CP015964.1|WP_020822329.1|2139061_2140039_+|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH	gnl|CDD|223352	COG0275, COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane].	1.25027e-145

Protein sequences

>NZ_CP015964.1|WP_008256120.1|2138259_2138691_+|division/cell-wall-cluster-transcriptional-repressor-MraZ
MFLGTYTPKLDDKGRLTLPAKFRDALAGGLMVTKSQDHSLAVYPRAEFEQLARRASKASRSNPDARAFLRNLAAGTDEQHPDAQGRITLSADHRRYASLSKECVVIGAVDYLEIWDAQAWQDYQQTHEENFSAASDEALGDII
>NZ_CP015964.1|WP_008256119.1|2137415_2137820_+|DUF3040-domain-containing-protein
MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGVALFVVGLAMLVSGVAFKATWIGGSVPILSIFGFIVMFGGVVFGITGPRLSGRPDHSGSAPTSLRQRRNKGGGSFTSRMEDRFRRRFDD
>NZ_CP015964.1|WP_036455202.1|2136480_2137089_-|GNAT-family-N-acetyltransferase
MGIFLIDLLPHDMERRLTDALTVYVDAMRYPRGTEQQRAAMWLEHIRRRGWQGAGVVEAEGPDDEGAPMPSAEDLTSAPLLGVAYGYPGAPGQWWQQQVVLGMQRGGSPPHEIARLMNSYFELTELHIHPRAQGRGLGEALARRLLAGRAEKNVLLSTPETNGEPNRAWRLYRRLGFTDVIRRYHFAGDPRAFAILGRELPL
>NZ_CP015964.1|WP_009953480.1|2135663_2136314_-|DUF3153-domain-containing-protein
MLLLLVPLATGCLRVRASLTVSPDDLVSGEIVAAAKPKTPKDTGPQLDSNNLPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDASGVNLSLRRNGNLVILEGRADLTSLTDSEADVELTVAFPGVVTSTNGDRVEPDVVSWKLKPGVVSTMTAQARYTDPNTRSFTGAVVWLGIASFAAAGVVGLLAWVGRDRSPRLTAPRDQPPPT
>NZ_CP015964.1|WP_020822325.1|2134756_2135653_+|hypothetical-protein
MTLNTIALELVPPNADEGRERALEEAHKVVRHSAEAGLDGRIRHVMIPGIIAEDDDRPIQMKPKLDVLDFWSVVKPELTGIRGLCTQVTAFMDEPSLRGRLTELSSAGMEGVVFVGVPRTMNDGEGSGVAPTDALSIYRELVTNRGVILIPTRDGEQGRFNFKCDQGATYGMTQLLYSDAIVGFLSEFARQTDHRPEILLSFGFVPKMESRVGLINWLIQDPGNAAVADEQEFVRKLAECEPPQKRQLMVDLYKRVIDGVADLGFPLSIHLEATYGISGPAFQTFAEMLAYWSPAQQG
>NZ_CP015964.1|WP_036455201.1|2133445_2134495_-|polyprenyl-synthetase-family-protein
MTGAITEQLRRYLDERRAETAYIGDDYNGLIAALEDFVLGGGKRLRPAFAYWGWRAVATDEPDEQVLLLFSALELLHACALVHDDVIDDSSTRRGRPTTHVQFATLHRDRGWRGSPERFGASAAILLGDLALAWADDIVFGVDLTPQAQRRIRRVWANIRTEVLGGQYLDIVAEASAAASIASAMNVDTFKTACYTVSRPLQLGVAAAADRPDVHDIFSQFGTDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTVLLAEAVELAETSDPVAANLLRTSIGAQLTDAQVDRLRDVIESVGALAAAEQRIATLTQRALATLAAAPINTAAKAGLSELAKIATNRSA
>NZ_CP015964.1|WP_020822323.1|2131893_2133441_-|alpha-(1-6)-mannopyranosyltransferase-A
MTTPTDTPADDAPAAKPPRGERLSQLRAFVAADESRPAKLGLLGSVLITLGGLGAGSTRQHDPLLESIHMSWLRFGHGLVLSSIVLWTGVGLMLIAWLGLGRRVLAGHATEFVMKTTTGFWLAPLLVSVPVFSRDTYSYLAQGALLRDGLDPYAVGPVANPNILLDNVSPIWSITTAPYGPAFILVAKLITVLVGNNVVAGTMLLRLCMLPGLALLIWATPRVARHLGADPSTALWICVLNPLVLIHLMGGVHNEMLMVGLMAAGIALTFGGRHVAGTALITVAIAVKATAGIALPFLVWVWARDLRDRRGYRSARALLAAAAASLLVFAVVFAILSAVAGVGLGWLTALAGSVKIINWLTVPTAAANLIHAIGSGLFPVSFYPLLRVTRLVGIAIIAVSLPLLWWRFRRDDRAALTGMAYSMLIVVLFVPAALPWYYSWPLAIVAPLAQSRRAVAIIGGASTWVMVIFKPDGSHGMYSWLHYSLATAVALIAWYTLHRAPRPRTGPAEVAAPAQ
>NZ_CP015964.1|WP_008256113.1|2131495_2131900_+|hypothetical-protein
MSSIPAGDDVLDPDEPIYDLPRVAELLKIPVTKVHQQLRDGHLVAVRRGEGVVVPQVFFTQSGEVVKSLPGLLTILHDGGYHDTEIVRWLFTPDPSLTVTRDGTKDAISNARPVDALHAHQAREVVRRAQAMAY
>NZ_CP015964.1|WP_020822322.1|2130125_2131343_-|serine/threonine-protein-kinase
MDNALLDGRYLIQAKIASGGTSTVYRGLDTRLDRPVAVKVMDSRYAGDEQFLTRFQREARTVARLKDPGLVAVYDQGSDARHPFLVMELIEGGTLRELLGERGPMPPYAVAAVLRPVLGGLAAAHRAGLVHRDVKPENVLISDDGEVKIADFGLVRAVAAAGITSTSVILGTAAYLSPEQVRDGDASPRSDVYSAGILAYELLTGHTPFTGDSALSIAYRRLDTDVPAPSASIDGVPVQFDQFVQRATARDPADRYADATEMGADLDAIADELALPDFSVPAPRNSAQHRSAALQHSRMGQRPATAQQPGPAPVRQPTRQLTRGPEDWPRPQRPAAAADEPDEDEDDYEYEPVAGEFAGIPISEFVWTRQHNRRMVLVWVALVLALTGLVATAAWTVGSNLNGLL
>NZ_CP015964.1|WP_020822321.1|2128658_2130047_+|3-deoxy-7-phosphoheptulonate-synthase-class-II
MNWTVDIPIDQLPPLPPLPTDLRARLDAALAKPAAQQPSWPADQASAMRTVLESVPPVTVPMEIVRLQEQLAQVARGEAFLLQGGDCAETFTENTEPHIRGNVRTLLQMAVVLTYGSSMPVVKVARIAGQYAKPRSADIDALGLKSYRGDMINGFAPDAAVREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWNREFVRTSPAGARYTALATEIDRGLRFMSACGVADRNLQTAEIYASHEALVLDYERSMLRLSENDSGEPQLYDLSAHTVWIGERTRQLDGAHVAFAEVIANPIGVKIGPTITPELAVEYVERLDPHNKPGRLTLVSRMGNNKVRDLLPPIVEKVQATGHQVIWQCDPMHGNTHESSNGYKTRHFDRIVDEVQGFFEVHRALGTHPGGIHVEITGENVTECLGGAQDISDTDLVGRYETACDPRLNTQQSLELAFLVAEMLRD
>NZ_CP015964.1|WP_020822329.1|2139061_2140039_+|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH
MPVLLERCVALLTPALTRHHPDGTGATLVDATVGAGGHAERFLTELPGLRLIGLDRDPTALDITRTRLARFSDRVTLVRTRYDGLATALAESGYAATESVDGMLFDLGVSSMQLDRAERGFAYAQDAPLDMRMDPDAPLTAADILNTYDEAELANILHRYGEERFARRIAAHIVRRRARQPFASTADLVALLYEAIPAAARRTGGHPAKRTFQALRVAVNDELDSLRAALPAALDALAVGGRIVVMAYQSLEDRIVKRSFAEAAASRTPVDLPVELPGHQPRFRALTQGAGRADATEIERNPRSAAVRLRALQRMESQQATGKGD
>NZ_CP015964.1|WP_036455203.1|2140038_2141289_+|hypothetical-protein
MKADRETSKRRVGSDRRGARDGAARRGRRPAPEPGAARRARGARTAAPAREPRAPKAGPQSSPVARPVERSARPKNASQAKARAKARKAKAPKVVRPKLTERLAARLASIDLRPRTLASKVPFVVLVIGALGVGLGLTLWLSTDSAERSYKLSHARERTRLLQQQKEALERDVREAEAAPALAEAARKQGMIPTRDTAHLVQDPSGNWVVVGTPKPADGVPPPPLNTKLPDEAPQPPKPAAPAAEVPMRLEPVPGAPAPARSGPEALLRAPDGASTVGGQHFPPAVPPVPGAPGAAGAPPAGTLPGMPGGPVTGALPGMPGGPVTGALPTPGLPMPARPATPPVPVEVPIPLGGLPIPAPGQLPAPLPPEVSVPVPLGRAAGPQPIAPAAPAPAPMPQPGTGSLPGPPGAVPGAPR
>NZ_CP015964.1|WP_036455204.1|2141285_2143361_+|penicillin-binding-protein-2
MSRGDTPRARRSQAARPTRGPRKDMADNAARQPKRRAKPQQADQGGDVREPKRLRKAKQPKASRGAQRPEPVGAGHSARERRTRQIVQMAGRGGSFVFRHRAGNVVILVLMLVAAAQLFVLQVTKAPTLRAQAAGQLKVTDVEKAVRGSIIDRRKDQLAFTIESRALTFQPKRIHKQLEEAKAKNSAAPDPQQRLRDIAKDVSGRLGNKPDSATLLKKLQSDENFVYLARAVDPAVASAISDKFPEVGSERQDLRQYPGGSLAANIVGGIDWDGHGLLGLEEAMDSVLSGTDGSVTYDRGSDGVVIPGSYRNRHRAVNGSMVQLTLDDDIQFYVQQQVQQAKNVSGAHNVSAVVLDAKTGEVLAMANDNTFDPSQDIGRQGDKQLGNLAVSSPFEPGSVNKVITASSVIEYGLSNPDEVLQVPGTIQMGGVSIHDAWDHGVMPYTTTGVFGKSSNVGTLMLAQRVGPERFYDMVRKFGLGQRTNVGLPGESAGLVPPIDQWSGSTFSNLPIGQGLSMTLLQMTGMYQTIANDGVRIPPRIIKATIAPDGTRTEEPRPDGVRVVSAQTAQTVRNMLRAVVQHDPMGYQQGTGPAAAVTGYQMAGKTGTAQQINPACGCYFDNVYWITFAGMATVDNPRYVIGIMMDNPERNADGTPGHSAAPLFHNIAGWLMQRENVPLSPDPGPPLTLQAT
>NZ_CP015964.1|WP_020822332.1|2143412_2144543_-|monooxygenase-FAD-binding-protein
MESMRILVSGAGIAGLSAAINLGADGHDVTLVERANHLRVNGSPIDIRGDSIGVADKMGVLAPIRAHRVDMTERVQFVDENGAVVAEPPLDEINDSAGDIEIPREDLTTILRDRLGPTVELRFNESIGELDDDDRRVDVRFNSGGRERYDLVVGADGMHSAVRRLTFGPEQRFLRHLGFYVALADLPGYTPSGRDNPMYNFPGRLAGIAAYNDKALAVLMFRSPWIDYDYHDLAAQKRILVDAFAGHSEWRVPELLDAAVADPELYFDSVSQIHMPGWHRGRVVLVGDAAHCASSLSGRGTSLALTGAWFLARALRDHPGDLGHACEQYERDQRPHALRCQATAAPGGDLLVPATQAQIDARNRDFTVATGRGREA
>NZ_CP015964.1|WP_020822333.1|2144654_2145212_+|TetR/AcrR-family-transcriptional-regulator
MEEALLDAAWTELTERGYDELTIDGVAVRAGTSRAVLYRRWPNKQELVLAAVAHEVAKDVVVAPDTGSLRGDAIALLRQANKVRVGLVVPLLTRLGGFYQQTGSSLADLETLVRGRRDAALNQAIQRAIDRGEIEPDQVTERIARLPVDLFRYEVLMTLRPLPDEAIEEIVDTVWLPLLERRNGS
>NZ_CP015964.1|WP_036455205.1|2145277_2146846_+|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase
MADGGGDGVSVPSALRPSAAAGVRLPALAADIGAAPAGDRAVPNLPVTGVTLRAQEVRPGDLFAALPGSTTHGARYAGDAVERGAVAVLTDAGGVAEMGALGQSVPILVHPDPRGVLGGLAAAVYGNPSERVTVVGVTGTSGKTTTTYLIESALRAAGRTAGLIGTIGIRIDGADIPSALTTPEAPALQAMLAAMAEQGVDTVVMEVSSHALALGRVDGTRFAVGGFTNLSRDHLDFHPTMADYFEAKAMLFDPSSPLRARRAVVCVDDDAGRAMAARAGDAITVSAEGRPAHWRAADVAPMGAGGQRFTAIDPAGARHQLGVRLPGHYNVANCLVALAILDAVGVSPEQASTGLLQARVPGRMEEVDAGQDFLALVDYAHKPGALRAVLTTLARPDRRLAVVFGAGGERDPGKRAPMGATAAELADLVVVTDDNPRGEDPASIRREIIAGATESGCAADIVEIADRRDAIRHAVAWAGPGDVVLIAGKGHETGQSAGGHTRPFDDRVELAQALRDRNGAPR
>NZ_CP015964.1|WP_008256138.1|2146842_2148390_+|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase
MIELTVAEIADIVGGTLADISPQDAARRRVTGTVEFDSRAVGPGGLFLALPGARSDGHDHAGAAIAAGAVAVLAARPVGVPAVVVAPAGASGSRAGVLEHDPDGSGAAVLAALAKLAQVVAAELVAGGLRIVGITGSSGKTSTKDLVAAVLKPLGEVVAPPGSFNNELGHPWTVLRATPDTDFLVLEMSARHPGNIAALAEIAPPAIGVVLNVGTAHLGEFGSREAIAQTKSELPQSVPASGVVILNADDPAVAAMAGVTAARVVRVSRAENTSAGPSQLWAGPVSLDEVARPCFTLHHRDASGTTQAQVRLGVYGDHQVTNALCAAAVALECGADVDQVAAALAGAGPVSRHRMHVTTRADGVTVIDDAYNANPDSMRAGLQALAWIAHGGGDRPAEKRRSWAVLGEMAELGEDAIAEHDRIGRLAVRLDVSRLVVVGSGRSMSAMHHGAVMEGSWGSADKGAVNVADSEAALALLRAELQPGDVVLVKASNAAGLGALADALVSQGSQGGARP
>NZ_CP015964.1|WP_008256140.1|2148386_2149466_+|phospho-N-acetylmuramoyl-pentapeptide--transferase
MRQILIAVAVALTVSILLTPALIRLFTRQGFGHHTRDDGPPTHHAKRGTPSMGGVAILAGIWAGYLGTHLAGLAFDGEGVSASGLLVLSLATVLGGVGFLDDLIKIRRSRNLGLNKTAKTVGQVAAAVLFGVLVLEFRNANGLTPASADLSYVREIATVALAPALFVLFCVVVVSAWSNAVNFTDGLDGLAAGSMAMVTAAYVLITFWQYRNACVTAPGLGCYNVRDPLDLAIVAAATAGACIGFLWWNAAPAKIFMGDTGSLALGGIIAGISVTSRTEILAVVLGSLFVAEVSSVVLQILTFRTTGRRVFRMAPFHHHFELAGWAETTVIIRFWLLTAIACGLGVALFYGEWLAAIGA
>NZ_CP015964.1|WP_036455206.1|2149465_2150923_+|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase
MSGLDPLAPGAPVLVAGGGVTGKAVLAALTRFGVVPTLCDDDPATLRGYADAGVATAPTSVAAEQVSRYALVVTSPGFSPTTPLLVAAAAAGVPVWGDVELAWRLDAAGHYGPPRRWLVVTGTNGKTTTTSMLHAMLTAAGRSNLLCGNIGSPVLDVLDQPAELLAVELSSFQLHWAPSLRPEGGAVLNIAEDHLDWHGTLADYAAAKARVLDGRVAVVGLDDARAAALLSTARAPVRAGFRLGEPGPGELGVRDGHLIDRAFADDLTLAPVDSIPVPGPVGVLDALAAAALARSVGVPAEAIASALAAFRVGRHRAEVVAVAEGVTYVDDSKATNPHAAEASVLAYPRVVWIAGGLLKGASVDAEVARIASRLVGAVLIGRDRQEVAEALSRHAPDVPVLQVVTGEDAGMDATAVVLGADVTEVKYSGGDLGATVMTAAVAAARGLAAPGDTVLLAPAGASFDQFAGYADRGDAFAAAVRAAIR
>NZ_CP015964.1|WP_036455207.1|2150931_2152629_+|putative-lipid-II-flippase-FtsW
MGNSLTRLLGRRKATSGTATEPGPAQDADATAEVTDAAAGDGDKADEPAKAAKAPKAKKDQAAGGDGGSPTRFGAWLGRPMTSFHLIIAIAGLLTTLGLIMVLSASGVRSYDADGSAWIIFGKQVLWTVIGLIACYTSLRMSVRFIRRVAFTGYVVTVILLVLVLVPGIGNLANGSRKWFVVAGFSMQPSELAKIAFAIWGAHMLAARRLERASLRELLIPLVPAAVIALALIVAQPDLGQTVSLGIILLALLWYAGLPLRVFATSLLAVFMAGAILAMSAGYRSDRVRSWINPENDPQDTGYQARQAKFALAHGGIFGDGLGQGTAKWNYLPNAHNDFIFAIIGEELGFIGAFGLLVLFGLFAYTGMRIARRSADPFLRLLTATTTMWVLGQAFINIGYVIGILPVTGIQLPLISAGGTSTAATLFMIGIMANAARHEPEAVAALRAGRDDKVNRLLRLPLPEPYSPTRLEAFRDRKRSRPQSGTAPRKGAGSPGRKAPRNGEAPLRGAPPRAAGRPVRRSAGNPRSRAGHHGSGQRYATLGANQAAGRRQQRRTRALEGQRYG

Crispr_ID: NZ_CP015964_2

• CRISPR_ID: NZ_CP015964_2
• CRISPR_location: 5275506-5275592
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP015964_2

Consensus_repeat	Method
CGGCGCGAGTGAGGAGCCGGACAATCGTGC	CRISPRCasFinder

spacers of NZ_CP015964_2

>2.1|5275536|27|NZ_CP015964|CRISPRCasFinder
AGTCCGGCGACGGCGAGCGCCGAGTAG

CRISPR arrays and Neighbor proteins around NZ_CP015964_2

CRISPR arrays

The CRISPR arrays of NZ_CP015964_2

>merge|NZ_CP015964|2|5275506-5275592|CRISPRCasFinder
CGGCGCGAGTGAGGAGCCGGACAATCGTGCAGTCCGGCGACGGCGAGCGCCGAGTAGCGGCGCGAGTGAGGAGCCGGACAATCGTGC

>NZ_CP015964|2|2|5275506-5275592|CRISPRCasFinder
CGGCGCGAGTGAGGAGCCGGACAATCGTGC	AGTCCGGCGACGGCGAGCGCCGAGTAG
CGGCGCGAGTGAGGAGCCGGACAATCGTGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015964.1|WP_020823910.1|5280096_5281071_-|DUF2236-domain-containing-protein	unknown	unknown	gnl|CDD|378343
NZ_CP015964.1|WP_008262270.1|5267816_5268551_-|DUF899-domain-containing-protein	unknown	unknown	gnl|CDD|377584
NZ_CP015964.1|WP_036455331.1|5263083_5263857_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|212491
NZ_CP015964.1|WP_020823906.1|5270639_5275472_+|cation-translocating-P-type-ATPase	unknown	unknown	gnl|CDD|223550
NZ_CP015964.1|WP_020823914.1|5284661_5285357_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|181335
NZ_CP015964.1|WP_036429697.1|5278360_5279104_+|cutinase-family-protein	unknown	unknown	gnl|CDD|366455
NZ_CP015964.1|WP_020823905.1|5269504_5270458_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|236196
NZ_CP015964.1|WP_009957137.1|5267501_5267723_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP015964.1|WP_020823909.1|5279185_5279950_-|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|226476
NZ_CP015964.1|WP_020823904.1|5268580_5269348_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|212491
NZ_CP015964.1|WP_080691257.1|5266505_5267003_-|SRPBCC-family-protein	unknown	unknown	gnl|CDD|176854
NZ_CP015964.1|WP_020823900.1|5263841_5265371_+|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl|CDD|341286
NZ_CP015964.1|WP_036454192.1|5267077_5267458_+|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl|CDD|378915
NZ_CP015964.1|WP_036454195.1|5277153_5278059_-|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|235962
NZ_CP015964.1|WP_020823901.1|5265385_5266528_+|NDMA-dependent-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|274905
NZ_CP015964.1|WP_020823912.1|5281903_5283289_+|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl|CDD|143636
NZ_CP015964.1|WP_008262303.1|5284150_5284603_-|polyketide-cyclase	unknown	unknown	gnl|CDD|176867
NZ_CP015964.1|WP_020823915.1|5285505_5286051_+|CGNR-zinc-finger-domain-containing-protein	unknown	unknown	gnl|CDD|378696
NZ_CP015964.1|WP_020823911.1|5281257_5281863_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP015964.1|WP_020823913.1|5283386_5284133_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|181382

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015964.1|WP_020823910.1|5280096_5281071_-|DUF2236-domain-containing-protein	gnl|CDD|378343	pfam09995, DUF2236, Uncharacterized protein conserved in bacteria (DUF2236). This domain, found in various hypothetical bacterial proteins, has no known function. This family contains a highly conserved arginine and histidine that may be active site residues for an as yet unknown catalytic activity.	2.17365e-52
NZ_CP015964.1|WP_008262270.1|5267816_5268551_-|DUF899-domain-containing-protein	gnl|CDD|377584	pfam05988, DUF899, Bacterial protein of unknown function (DUF899). This family consists of several uncharacterized bacterial proteins of unknown function.	2.08741e-99
NZ_CP015964.1|WP_036455331.1|5263083_5263857_+|SDR-family-oxidoreductase	gnl|CDD|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.05528e-74
NZ_CP015964.1|WP_020823906.1|5270639_5275472_+|cation-translocating-P-type-ATPase	gnl|CDD|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_CP015964.1|WP_020823914.1|5284661_5285357_-|SDR-family-oxidoreductase	gnl|CDD|181335	PRK08264, PRK08264, SDR family oxidoreductase.	1.20473e-95
NZ_CP015964.1|WP_020823905.1|5269504_5270458_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|236196	PRK08241, PRK08241, RNA polymerase subunit sigma-70.	2.98254e-139
NZ_CP015964.1|WP_036429697.1|5278360_5279104_+|cutinase-family-protein	gnl|CDD|366455	pfam01083, Cutinase, Cutinase.	8.75153e-42
NZ_CP015964.1|WP_020823909.1|5279185_5279950_-|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|226476	COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane].	5.87851e-89
NZ_CP015964.1|WP_020823904.1|5268580_5269348_-|SDR-family-oxidoreductase	gnl|CDD|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.2708e-25
NZ_CP015964.1|WP_080691257.1|5266505_5267003_-|SRPBCC-family-protein	gnl|CDD|176854	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket; they bind diverse ligands. Included in this superfamily are the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, and the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), as well as the SRPBCC domains of phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of this superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	4.20915e-07
NZ_CP015964.1|WP_020823900.1|5263841_5265371_+|long-chain-fatty-acid--CoA-ligase	gnl|CDD|341286	cd17631, FACL_FadD13-like, fatty acyl-CoA synthetase, including FadD13. This family contains fatty acyl-CoA synthetases, including Mycobacterium tuberculosis acid-induced operon MymA encoding the fatty acyl-CoA synthetase FadD13 which is essential for virulence and intracellular growth of the pathogen. The fatty acyl-CoA synthetase activates lipids before entering into the metabolic pathways and is also involved in transmembrane lipid transport. However, unlike soluble fatty acyl-CoA synthetases, but like the mammalian integral-membrane very-long-chain acyl-CoA synthetases, FadD13 accepts lipid substrates up to the maximum length of C26, and this is facilitated by an extensive hydrophobic tunnel from the active site to a positively charged patch. Also included is feruloyl-CoA synthetase (Fcs) in Rhodococcus strains where it is involved in biotechnological vanillin production from eugenol and ferulic acid via a non-beta-oxidative pathway.	2.80973e-176
NZ_CP015964.1|WP_036454192.1|5267077_5267458_+|nuclear-transport-factor-2-family-protein	gnl|CDD|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	0.000409324
NZ_CP015964.1|WP_036454195.1|5277153_5278059_-|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|235962	PRK07201, PRK07201, SDR family oxidoreductase.	3.16009e-87
NZ_CP015964.1|WP_020823901.1|5265385_5266528_+|NDMA-dependent-alcohol-dehydrogenase	gnl|CDD|274905	TIGR03989, Zn-dependent_alcohol_dehydrogenase_class_III, NDMA-dependent alcohol dehydrogenase, Rxyl_3153 family. This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus. [Unknown function, Enzymes of unknown specificity].	9.61044e-174
NZ_CP015964.1|WP_020823912.1|5281903_5283289_+|adenylate/guanylate-cyclase-domain-containing-protein	gnl|CDD|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	8.99692e-32
NZ_CP015964.1|WP_008262303.1|5284150_5284603_-|polyketide-cyclase	gnl|CDD|176867	cd07825, SRPBCC_7, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	8.48127e-52
NZ_CP015964.1|WP_020823915.1|5285505_5286051_+|CGNR-zinc-finger-domain-containing-protein	gnl|CDD|378696	pfam11706, zf-CGNR, CGNR zinc finger. This family consists of a C-terminal zinc finger domain. It seems likely to be DNA-binding given the conservation of many positively charged residues. The domain is named after a highly conserved motif found in many members of the family.	8.82366e-12
NZ_CP015964.1|WP_020823911.1|5281257_5281863_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.1792e-12
NZ_CP015964.1|WP_020823913.1|5283386_5284133_+|methyltransferase-domain-containing-protein	gnl|CDD|181382	PRK08317, PRK08317, hypothetical protein; Provisional.	8.68996e-39

Protein sequences

>NZ_CP015964.1|WP_020823906.1|5270639_5275472_+|cation-translocating-P-type-ATPase
MKIPGVSDVVAGVAGGAAQVVRAGVSTAAGAAGALQTLAGPVAELAGPVLQSVVQTTGRAIGADTSTDNAAAPITPPVRWHSGQRVHLDLDPLLPFPRWGEYAPAVEEPVRRIPGVAEAHVEGALGRLVVELSDGTDHDAVLDEVRSTVASIAADITWSKSEAATPSAPFADPGNPLAILVPLTAAALDLVAMGAAVTGWVTRLPAAPQTTRAAAALINHQPRMVSILEERLGRVGTDIALAATTAAAHGLTQSFGTPMLDLTQRTLQVSEAAAHRRVWRDREPHLASPQRPQAPVVPVISSAKSEVPRHSWAAAAAGEASHVVVGGTIDAAMDKAKGSMAGPVESYVDSAANGSLIAAVSALVAGGGTDDAAAAIEAGVPRAAHMGRQAFAAILGRGLANSGQLVLDPGALRRLDRVKVVVIDGAALRGDHRAVLRVRGDAPGWDDDRVYEVADALLHGEQAPEPDPDELPATGARLKWVRNQGPSATPAQGLESADLIVDGECVGSVDVGWEVDPYAIPLFQTAHRTGARVVLRHVAGTEDLTASVGATHPPGTPLLNVVRELRADRGPVLLITALHRDFASTDTLAALAIADVGVALDDPRAATAWTADIITGTDLADAVRILSAIPVARSASESAVHLAQGGTTLAGLLLVTGEQEKTTNPVSFRRWLNPVNAAAATALVAGTFSATRVLRLPDPTPQPLTAWHALDPEIVYSRLAGGARPLAVETEPSWRRRLDDLSYSPGLAPLRKPLHNIARLASATRTELADPLTPILAVGAAASAIVGSNIDALLVAGVMTVNAITGGAQRLRAESAAAELFAEQDQMVRRVVVPAVATTRRRLEAAKHATRTATVSAKSLRPGDVIDLAAPEVVPADARLLVAEDLEVDESLLTGESLPVDKQVDPVAVNDPDRASMLFEGSTIVAGHARAIVVATGVGTAAHRAISAVADVETAAGIQARLRELTSKVLPLTLAGGATVSALALLRRAPLRQAVADGVAIAVAAVPEGLPLVATLSQLSAAQRLTARGALVRAPRTIEALGRVDTICFDKTGTLTENRLRVVCAVPVGVDPHDPLPQLTDPQSAGLLRAAARASAQPQDGQGHAHATDEAILTAANSLNGHGDSDWTMIAEVPFESSRGFAAAIGALGSSNGHPADAPVLILKGAPEVILPRCRFADPQADQERAEGVVRGLAEQGLRVLAVAQRGWKHETDDDDTDADAVDAAAEDLELLGYVGLADTARASARPLIEALTDADRDVVLITGDHPITARAIARQLGLPADARVITGAELAGLDEDACSKMVADVQVFARVSPEQKVQIVAALQRCGRVTAMVGDGANDAAAIRMADVGIGVSGRGSSAARGAADIVLTDEDLGVLMDALVEGRSMWAGVRDAVTILVGGNVGEVLFTIIGTAFGAGRAPVGTRQLLLVNLLTDMFPALAVAVTSQYVEPDEAEYASPEEAEEARRQHRRAVLTGPTPSLDAPLMRQIVTRGAVTAAGATAAWAIGRWTPGTERRTATMGLTALVTTQLAQTLLTRRHSPLVIATALGSAGVLVGIVQTPVLSQFFGCTPLGPVAWSGVLGSTAGATVISALAPNWLAKQVAALEPAEE
>NZ_CP015964.1|WP_020823905.1|5269504_5270458_+|sigma-70-family-RNA-polymerase-sigma-factor
MPAQEEFVERAAPFRAELIAHCYRMLGSVHDAEDLVQETYLRGWRGYQAFEERAALKTWLYRIATTACLRALENRARRVLPAGLGEGSMDPDADLGAAGAHAWLEPIPDDMMFKGPEEDFTAKQSVRLAVMTALQELPARQRAVLILRDVVQFSAAEVAELLETTPAAVNSSLQRARAHLAELSPSEEQMAEPGDARRRELLDRYCAAFENADMAALTALLQADVKLEMPPLPVWFAGRDTVLKFLAERAVAQPGDIAMVPTAANAQPAVAEYRRAADHVLRAHSIHVLTPGRDGIAGITVFLDPDLFSAFGLSATR
>NZ_CP015964.1|WP_020823904.1|5268580_5269348_-|SDR-family-oxidoreductase
MNQTPNPGADGVAGSTAIVTGAGRGFGRAIATALATAGAEVVGVARTRSQLEEVRAQLGDTFTPVVADAADPATAGRLIDRHRPRTLVLCAGAAPRMAPLQDQTWASFSDNWNSDVAQAFHWVRDALRRPLAPGSSVVVMSSGAALAGSPLSGGYAGAKATVRFLAGYAALESQRAGLGIGFTAVLPRLTPATGLGAAAVAAYAERQGVDVDTFLQAAGPALTAEQVGKSVLEIATDGPDHDAYLLTSAGLAPLT
>NZ_CP015964.1|WP_008262270.1|5267816_5268551_-|DUF899-domain-containing-protein
MNTPPIVTAQEWASAHRELLEEEKKLTRARDALAARRRRMPWMEVDSDYRFEGPEGAVNLAGLFGGRRQLIVYRAFYGPDIDGWPERGCRGCSMMADHVGNLAHLNARDTTLVFASRAPQADIARLKERMDWKMPWYTITDGFDADFGVDEWHGTNAFIRDGDRVFRTYFINNRGDEALGTTWSFLDMTALGRQETWEDSPEGYPQTAPYEWWDWHDAYGEHEPSRWFGDPDPNNPNDIRPPKS
>NZ_CP015964.1|WP_009957137.1|5267501_5267723_+|hypothetical-protein
MEADGTPESVPVEKLHSGDPITDCGQRYIVLESKALSDCVVLELESRVDHQLQVIEKSFPTGYQVGRANHRIL
>NZ_CP015964.1|WP_036454192.1|5267077_5267458_+|nuclear-transport-factor-2-family-protein
MGDAAEGQAVERYLQCLTDHDWDGLAGTLAEDGLTREGPFCDVVEGKAHYVAYLRKVCTVLQGHRLQVRRISHVDARTSYAELSETFEIDGVATTWPECILFERDDDGLIVHVSVFFKQRQAGTAT
>NZ_CP015964.1|WP_080691257.1|5266505_5267003_-|SRPBCC-family-protein
MALHARARSLLFVHADRTLSERVPAPPDAVRGFYVDLDNIRLVHPLIVSVETLSRAETPEGYQQSYRVVDRIPLGPLTIRTAYHARLRVPADGDVLTEADQSPGVRLRGTVSFVPDDGGTRVTERIRISAPRLLAGVTVREAVKAHAEMLAGIRRHFEVTHPRNR
>NZ_CP015964.1|WP_020823901.1|5265385_5266528_+|NDMA-dependent-alcohol-dehydrogenase
MIRGVGQDWEIREIELDPPRGGEVLVRMAVAGICHSDDHLFTGDVVPTPEALAASGQPAPDWFPLLGGHEGAGVVEEVGPGVTSVRPGDHVALSFIPACGSCRFCVNGQSYICDIGASLFVREMPTDGTCRRHLGDENLLAYGQLGTFAEYAVLSERSVIKIDDAIPFHAASLVSCGVSTGWGSATISAGTEPGDTVVVIGAGGVGMNALQGARAVGAKYVVAVDPVESKRDSAKVFGATHTAASAEDAIPLVREITAGLMADRVVVCPGVVHVDLLPLAMALLRKGGICVLTGITPFTEPPVPLVLQEMTLSAKQLRGALYGGMNPRTSVPMLLSLYQAGAVKLDELVTRHYRLDQINEAFVDLREGRNIRGVIDFAGA
>NZ_CP015964.1|WP_020823900.1|5263841_5265371_+|long-chain-fatty-acid--CoA-ligase
MDGAVNLFAMLDQAASRHPHRGAVYHGTRRLYTWIELRDRALRRAASIREQHAAGARLAIATHNRPEIIELMFAIWAAECVVVPINYKLHPREMAEILDDAGAARVFASTEIAGELAPITTTPMETFESQDYSRRLTVAPSPKPRTDPSALAWLFYTSGTTGRSKGAMLSHRNLTAMTVAHLADIDDPDERCSLLHAAPMSHGSGLYVLPYVLRAARQVVPASGAFDPDEFLDLCEHHPAGSAFLAPTMVQRLVGTGRARPANLKSIVYGGGPMYVESLRKAIAAFGPIFAQIYGQGESPMTITGLRRADHESGDDAILGSVGYARSGMDVAVLRADGDPAPVDEIGEIVCRGDAVMSGYWRNPDATCAALKEGWLYTGDMGSFDARGFLTLRDRSKDVVISGGSNIYPREVEEVLLEHPAVAEACVVGAPDAEWGEVVVAFVVGTGDPVDPAALDAHLLARIARFKRPKRYEFVDELPKNSYGKVLKRELRARLAPPRECHETSGRSQ
>NZ_CP015964.1|WP_036455331.1|5263083_5263857_+|SDR-family-oxidoreductase
MQVAIVTGASSGIGLGCATKLAETGMAVLGTGRDQDRLAELHTAIGDPDRVATLAVDLTDDDAPRRIVDLAVQRWGHIDFLINNAGVGSPKPLHETDDETLDYFLGLMLRAPFRLARDVLPHMGPGSAIINVTSTFAVVGGLRGGAYSAAKGGLTALTTHIACQYGASGIRCNAVAPGVTVTPMVEKRLQDERFRKINTEMTPHPRLGRVDDIAGTVAFLCSPGGSFINGQTIVVDGGWSSTKYLSEFALSSRWTER
>NZ_CP015964.1|WP_036454195.1|5277153_5278059_-|SDR-family-NAD(P)-dependent-oxidoreductase
MLNAVAQALNAVLTAAGDHVANPARVSDPDKLRAATSGKTALVTGASYGIGEATARRLAAAGATVLAVARSEERLGDLTASINAGGGHAVAYPTDLTDESAVSGLAKQITEEHGPLDIVVSNAGKSLRRSLHHQYDRPHDFQRTIDINYLGPVRLLLGLVPGMRDNGSGHIVNVSSVGVRVAPGPQWGAYQASKGAFDRWLRSVAPELHADGVDVTTIYFALVRTRMIAPTPLLGRFPGLSPDDAADVIAKAVIERPRTLEPPWVLPAEFASVLLAGPADHAARLWHRRFLTDADGGDRDH
>NZ_CP015964.1|WP_036429697.1|5278360_5279104_+|cutinase-family-protein
MFARHMVRSVGPAVVIAASGMAASAVSGSLIPTAAAQCPDVQVVFARGTGEEPGVGPTGQAFVDALHQRVGDRSFDVYPVNYPATDQWDTGIDGIRDAGAHVVSMAHDCPNTKMVLGGYSQGAAVMGFVTSAAVPEGIDPATVPKPLSPDVANHVSSVVLFGMPNVRAMNFLGEPPVVIGPAYQDKTLKVCATEDPVCSDGMNFAAHNTYADDGSIIDKGVAFASSHLGMGSPGAMSVASPHGGFGE
>NZ_CP015964.1|WP_020823909.1|5279185_5279950_-|SDR-family-NAD(P)-dependent-oxidoreductase
MQMTGNTVLVTGGGSGIGRGLAESFHRLGNQVIIAARRSDQLRAVAESNPGIQTLSLDQGDAADIRRFATEVTDHYPDLNVLINNAGIQRVEDLTSGNVGLAEQSVAINLLGPMRLTASLLPALLRKSHATVLNVTSGLAFMPSALTPTYCAAKAALHSYTESLRFQLRDTSVQVIEIIPPHVRTALQGERGFDPRAMPLDEYITETMTLLQTQPQANEIVVERVKMFRYAERDGTYGDIYPRFNETITAMFGS
>NZ_CP015964.1|WP_020823910.1|5280096_5281071_-|DUF2236-domain-containing-protein
MTAQNDELAAPSAGSRFDSGVREAVPMPTDGPDWSAADDTSPRLGPDSLIWKFYGDNRTQLFGFQRTAGVENCIEQLAQGVLDHSVIFSDTLGRAKRTAPPLMNTVYSEDPHEWGRKVRDFHKTIKGTISDGSRYHALNPELFYWAHASFVDQVIYNTDTFIRRLSRVEKERIFNEGKVWYSLYGVSDRGQPQTYDDFVAYWDEMLDRFVPHKTVLYGTGYIRKGIPGPRWMPKPIWNVVSAPLNAYTRLVVVGTLPPQMREVCQLHWDAKKEKRFQRFAAVIRALNPLINRLPVKALYTPWAARAWARARVDPRKLHNRAAAA
>NZ_CP015964.1|WP_020823911.1|5281257_5281863_+|TetR/AcrR-family-transcriptional-regulator
MQSEPGSASHSASSEALTDLDRTILDTARGVFETYGVRRANIDDVATRAGVSRSTIYRRFPTKEKLFGQVVRREAALFFSTLDQATAGCNPREAVVEAFALGVRLVQDSPLYSRIAESEPELFGMFSRSHVFPIRQFADGIAHTLRRCGAEMSGTDLDNVADILLRVALGIIVFPTDRLDTSDPAAVREYAARYLVPIIGP
>NZ_CP015964.1|WP_020823912.1|5281903_5283289_+|adenylate/guanylate-cyclase-domain-containing-protein
MAGSSAAPRTRYASCGEIDIAYQVFGDGPIDLLVLPGPFIPIDCVDSEPSMYRFHRRLASFCRVIRFDQRGIGLSSRVPSLDMIGAESWANDAIAVMNAVGCERATILAPSFTSLAGVVLAADFPERVNSLVIVNGQARTLRAPDYPFGSDLAEADPYTTVAIEPDAVERGFDILGIIAPSVAHDDAFRSWWDMAGNRAASPSMARAFIGKIREGDVRDRLDRVGVPTLILHRDNPRFSPVGHARYLAERIPGSRLVELPGEDVLYWVGDTGPMLDEIEEFITGIRGASDAERLLTTIVFTDIVGSTERAAELGDYRWRDLLDNHDRIVRHELQRFGGREVNTAGDGFVATFSSPSAALACADALVDAVQVLGIEVRVGIHAGEVEVRGAGKDDIAGMAVHIGARVAALAGPSEVLASSTLRDIVTGSRHRFGDRGESALKGVPGYWRLYALVREHAAVRR
>NZ_CP015964.1|WP_020823913.1|5283386_5284133_+|methyltransferase-domain-containing-protein
MTDVDITLPPALRRALDLLIDPPADPDVSHGYLDLLGSGSAGDDGVGKNTGPIQAAWASRVGSMLYDNAQSVARQWISAWQLPLEWLQIPPGGIALDVGSGPGNVTASLARAAGPEGLALGVDISEPMLARAVRNEAGPQVGFIKADAQRLPLRDNTFDAAVSTAVLQLVPDPKAALAEIARVLRPGGRVAIMVPTAGRLARYWQRLPNVGAHAFDDDEIGDTLEDNGFSSVRVKNIGTFQWVRAKLG
>NZ_CP015964.1|WP_008262303.1|5284150_5284603_-|polyketide-cyclase
MSDTERIVTATRVMSANAARIFELIADPSRQPSWDGNGNLASSAPGQRVRAVGDVFKTTLTNGAVRENHVTEFVEGSKIAWRPAEPGKQPPGHLWRWELSPVNAELTTVTHTYDWTELTDATRLERARATTTDMLRESMDRLAALAQSAE
>NZ_CP015964.1|WP_020823914.1|5284661_5285357_-|SDR-family-oxidoreductase
MVNANGAIVVVTGGQRGLGKAIVAELLDRGAAKIYATARAPKPSEDPRVIGVELDVTRPDSVAALAARAADADIVINNAGVLGARTLLDSDIEEVRAVFETNYFGALRVAKAFAPVLADNGGGALVDIASILSWMPGSGGYGDSKAAVWSMTNSLRAELEKQGTLVIAAHLSFTDTDMTSGFDAPKNDPRQVARAIVDGIEADDKEVLADDDTRYVKAALSGPVEALPRMP
>NZ_CP015964.1|WP_020823915.1|5285505_5286051_+|CGNR-zinc-finger-domain-containing-protein
MVQDFLNTRGIDGYGPDLLADPGQAREWANAAVRAWSSARGVDVSPPELGEADLGRLRAVRSTIERMVDGEPPRPRGAHGVVASFGLSDAGEVRLDPSGSGWRWLASALWGEILLSQHADTWRRIKRCHNHRCGSTFYDRSKNNSGVWHDVKTCGNAVNLRASRARRREREKATRSAISPQ

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP015964_1	1.1|2138964|20|NZ_CP015964|CRISPRCasFinder	2138964-2138983	20	NZ_CP015964.1	2138997-2139016	0	1.0

1. spacer 1.1|2138964|20|NZ_CP015964|CRISPRCasFinder matches to position: 2138997-2139016, mismatch: 0, identity: 1.0

gcgggtcgccactaaaggat	CRISPR spacer
gcgggtcgccactaaaggat	Protospacer
********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	NC_011961	Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence	77886-77912	4	0.852
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	274827-274853	5	0.815
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	NC_023285	Streptomyces sp. F8 plasmid pFRL5, complete sequence	29825-29851	5	0.815
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	NZ_CP033227	Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence	469539-469565	5	0.815
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	NZ_CP024309	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence	198167-198193	6	0.778
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	NZ_CP039909	Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence	50057-50083	6	0.778
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	NZ_CP032156	Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence	9821-9847	6	0.778
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MK977708	Mycobacterium phage Fulbright, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MG099948	Mycobacterium phage Philonius, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MH926055	Mycobacterium phage Chewbacca, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	KF986246	Mycobacterium phage MichelleMyBell, complete genome	10591-10617	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MT723932	Mycobacterium phage Schnauzer, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	KU935726	Mycobacterium phage Xerxes, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MT498042	Mycobacterium phage Rebel, complete genome	10597-10623	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	KU935730	Mycobacterium phage Pipsqueaks, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MH316570	Mycobacterium phage Silvafighter, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MK524518	Mycobacterium phage Smurph, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MK524515	Mycobacterium phage Parmesanjohn, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MH697585	Mycobacterium phage Gex, complete genome	10550-10576	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MH399787	Mycobacterium phage Rubeelu, complete genome	10572-10598	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	KM588359	Mycobacterium phage Carcharodon, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MH697576	Mycobacterium phage Aggie, complete genome	10552-10578	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	NC_021061	Mycobacterium phage Butters, complete genome	10572-10598	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MH697593	Mycobacterium phage Tapioca, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MK524500	Mycobacterium phage Kevin1, complete genome	10573-10599	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	KU935727	Mycobacterium phage Panchino, complete genome	10573-10599	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	KU935729	Mycobacterium phage SkinnyPete, complete genome	10597-10623	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	MG099936	Mycobacterium phage Andies, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	NC_031243	Mycobacterium phage Xeno, complete genome	10551-10577	7	0.741
NZ_CP015964_2	2.1|5275536|27|NZ_CP015964|CRISPRCasFinder	5275536-5275562	27	JN256079	Mycobacterium phage Charlie, complete genome	10551-10577	7	0.741

1. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to NC_011961 (Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.852

agtccggcgacggcgagcgccgagtag	CRISPR spacer
agtccgacgacggcgagcgcccagtcc	Protospacer
******.************** ***  

2. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.815

agtccggcgacggcgagcgccgagtag	CRISPR spacer
cgtccggcgacggcgagggccgactcc	Protospacer
 **************** ***** *  

3. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 5, identity: 0.815

agtccggcgacggcgagcgccgagtag	CRISPR spacer
agtccggcggcggcgagcgcctggccg	Protospacer
*********.*********** .*. *

4. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to NZ_CP033227 (Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence) position: , mismatch: 5, identity: 0.815

agtccggcgacggcgagcgccgagtag	CRISPR spacer
tttccggcgaccgcgagcgccgtgtcg	Protospacer
  ********* ********** ** *

5. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to NZ_CP024309 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence) position: , mismatch: 6, identity: 0.778

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gacacggcgacggcgagcgccgagccg	Protospacer
... ********************. *

6. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to NZ_CP039909 (Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence) position: , mismatch: 6, identity: 0.778

agtccggcgacggcgagcgccgagtag	CRISPR spacer
ccgccggcgacggcgagcgccgcgccg	Protospacer
   ******************* *. *

7. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to NZ_CP032156 (Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence) position: , mismatch: 6, identity: 0.778

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gatccggcgacggtgaccgccgagtct	Protospacer
..***********.** ********  

8. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MK977708 (Mycobacterium phage Fulbright, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

9. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MG099948 (Mycobacterium phage Philonius, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

10. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MH926055 (Mycobacterium phage Chewbacca, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

11. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to KF986246 (Mycobacterium phage MichelleMyBell, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

12. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MT723932 (Mycobacterium phage Schnauzer, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

13. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to KU935726 (Mycobacterium phage Xerxes, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

14. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MT498042 (Mycobacterium phage Rebel, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtaccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

15. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to KU935730 (Mycobacterium phage Pipsqueaks, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

16. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MH316570 (Mycobacterium phage Silvafighter, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

17. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MK524518 (Mycobacterium phage Smurph, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

18. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MK524515 (Mycobacterium phage Parmesanjohn, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

19. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MH697585 (Mycobacterium phage Gex, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

20. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MH399787 (Mycobacterium phage Rubeelu, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

21. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to KM588359 (Mycobacterium phage Carcharodon, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

22. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MH697576 (Mycobacterium phage Aggie, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

23. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to NC_021061 (Mycobacterium phage Butters, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

24. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MH697593 (Mycobacterium phage Tapioca, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

25. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MK524500 (Mycobacterium phage Kevin1, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

26. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to KU935727 (Mycobacterium phage Panchino, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtaccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

27. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to KU935729 (Mycobacterium phage SkinnyPete, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtaccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

28. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to MG099936 (Mycobacterium phage Andies, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

29. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to NC_031243 (Mycobacterium phage Xeno, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

30. spacer 2.1|5275536|27|NZ_CP015964|CRISPRCasFinder matches to JN256079 (Mycobacterium phage Charlie, complete genome) position: , mismatch: 7, identity: 0.741

agtccggcgacggcgagcgccgagtag	CRISPR spacer
gtgccggcggcggcgagcgccgagggc	Protospacer
.  ******.************** . 

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	3266030 : 3275120	8	Shahe_endorna-like_virus(50.0%)	NA	NA
DBSCAN-SWA_2	3978079 : 3984655	7	Bacillus_phage(33.33%)	NA	NA
DBSCAN-SWA_3	4490015 : 4500054	9	Burkholderia_phage(57.14%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP015964|3266030:3275120|DBSCAN-SWA
AATGAGATTTGCCCTGGCGAGTTACGGAACTCGCGGCGACATCGAGCCCTCCGCTGCGGTGGGCCGCGAACTGGTGCGCCGCGGGCACGACGTGTGCCTGGCCGTCCCCCCCGAACTAGTTGGCTTTGTCGAGTCGATCGGACTCGCGGCGGTTCCCTACGGCCCCAAGGTGGAGGAATTCCTGGATGAGGAATTCCTCCGGAACATGTGGACGGATTTCTTTCGCAATCCGATCAGACAGGTGTCCAAGGTTTGGGATCCGCTTATCAAGTACTGGGGCGACGCGAGCACGACGCTGAAGTCGTTGGCGGATGGCGTCGACCTGCTCTCCACTGGCCTGAATTTCGAGCAGGCCGCCGCCAATGTTGCTGAGTACTACGACATTCCGTTGGCCTCGTTGCACCACTTTCCCATGCGAACCAACGGCCGGCTTGTGCCGAGCGTTCCTTCCCCGTTGGTGCGCTCGACGATGGCGATGATCGAGTGGTTGTTTTGGCGCTCGACGAAGAAGGTCGACAACGCGCAGCGACGAGAACTTGGACTGCCCAAGGCGACACATCGTTCGCAGCGACGAATCGCCGACCACGGTTGGCTGGAAATCCAAACCTACGACGACGTGTTTTTTCCCGGCCTGGCCGCCGAATGGGCGAAATGGGGTAGCCGCCGTCCGTTCGTCGGCGCACTCACAATGGAGTTGGCGACCGACGCCGACGACGATGTCGCCTCATGGATCGCCTCGGGAACACCACCCATCTGCTTCGGGTCCGGGAGCATACCGGTCGAATCCCCCACCGCCACCGTCGAGATGATCGGTGCGGCGTGCGCACAGCTGGGCGAGCGGGCGCTCATTTGCTTCGGCGGCACAGATTTCAGCGACGTGCCGCATTTCGACCACGTCAAGGTCGTCGGCCCGGTGAACTACGCGTCCATATTCCCCGCCTGCCGTGCGGTCGTTCATCACGGCGGTTCGGGCACCACTGCCGCGAGCCTCCGCGCGGGTATCCCGACCCTGGCATTGTGGAGTTCGGCCGATCAGCCGTATTGGGCGGCCCAGATCAAGCACCTCAAAGTTGGGACCGCCCGGCGCTTTTCGGCCACTACCCCGGGCTCCCTGGTGGCGGACCTGCGTACTATTCTCGCCCAGGACTACGCGACCAGGGCCCGGGAACTCTCCGCCCGGATGAGCAAGCCCGCCGAGAGCGTCGGGACCACCGCCGACCTTTTGGAAGATGCCGCGCGCCGGAAAGCGCTTGCCTAGCAGAGGATTAGCGCCGGCCCGCGGGCGTGGAATTCACCCGGCTGGCGGCCGCCTTGAGTGAATCGGGAAGGAACCGCAGGGCCACACCCACGGTCTTGGTGGTCAGCGATCCGCCGACGACCCTGCGATCGCCGCGCATCATCGCCTCGAAGCCCTGCCGGGCCACCTCGGCCGGGTCGTCCTTCGGCTTTTGGCCCGCGCGTGTCTCGTCCATACCGGCGCGGTTGAAGAAGTTGGTCTCGATGGTGCCGGGCAGCAGGGAGGTGATGGTGATTCCGGTATCACGCAATTCGTCCTGCAGGGCCCCGGCGAAGGACTGAACGAACGACTTGGAGGCGTGATAAACCGCCTCGAACGGGCCGGGCGCCATCGACGCCAGCGACGAGGTGAGCAGTACCTTCCCCGCGTTGCGACGGGTCATGTTACGCAAGACAAGCTTGGCCAGGTGCACGGTCGAGCGCACGTTGAGGTCGATGATGGACATATCATGTGCCAGGTCGCCCTCGACGAAGCTTCCCCCGCCGCCGATGCCGGCGTTCAGCGCGGCCGCGTCGAGCGGCCGATCACCCTCTGTGGCCTGCTGATAGAGCTTTTCGACGCCTTCCGGGGTACGGAGGTCAACCTGTACCGGCCGCACGTCGACACCCCAGCGAGACAACGTGGTGGACGCCGGGAAGATGCCGTCGTTTTCGGCGGCCACCACCAGGTCATATCCCCGCTGGGCGAAAAGCTCCGCGAGCTCGAGACCGATTCCACTGGACGCCCCGGTGATCAATGCTAATGCCATAGCAGAGGCCTACCCGTGTGAAAGGACGTGAAACCCGATCGCGCGGCGACTCGCGGTCCGGCGCGCTAAACCCTTGGGAGAAGGCCTGGTTCGCTTAGCGTGCCGGCTTGATGAGCAGGCCCTGGCCCGTGGGCAATGTGCAGATTTTCACACCCAGTTCGCCGGCGACCTCGTCCATGGCGGCGCGCTGCTCGTCGCGTCCCCGGTTGGCGTAGTCATCCAGCAGCACGAAGGCGCCCGGGGTGAGCCGCGGCCAAAAGAACCGCAGCGCAGCGACTTCGGGGGGAGCGCAGTTCATGTCGATGTGCAGGTACGCCACCGACGGCGCATCGACCTGCTCCAGTGTCTCGGGAACCGCGCCGACGATGATGCGATGGTTCTTCCATTGCGCGAAATTGGCGCGGACGCTGTCCACCCCGTTGACGTACATCCCGTTGCGCAGGTGTCCTTTGCTGGTCTCCAGCGCCCCGGCCCGGCGTTCGTTCTCGGTGACGAACCGCGGGTCGAGACCGGCGAAGGTGTCCAGCAAATAGAACGTCTTGCCCAGCCGATCCCAGTCGAGGTACTCCATGATGGCGCTGCTCAAGAACCCGTAACTGACGCCGCACTCGACGAAATCGCCCTCGAGCTTGCTGGCGCTGGCCGCCGCCCACAGCCCCACGTGCACGCGCCATTGCCACTGGTACCAATCCTCGTTGCCGAGGGAACGGGCACCACGCTGGTAGGCGCGCTGGAATTCGGGATCATCGAGAAACGCGTGAAAGTTGTTGAACGTGATCAACGCGTCGTTGGCGTAGACGTCGGGCAACAGTGTGCGCGCGAGCCAGTATTCGGTGCGCACCCACCACATCCGCAGGCGGGTGCCGGTTGTCAGCCCTGGTGCCACGGCGGCAACCATAGCATCGGCACGTACCGCGTCCGGTGCAAACGGAATCGGTTCATCATGATCGTGTTCCGCCCATCCCGCACCGGAAGGCAAATCGTCTCGTACACCTAGAATTTCAGCGATCTCTTTAGGACTTACGCCATAGCACGCCGGTGCCGTCGATCTCGACGATCTCGTCGGTCACGCCGTGCTTGTCGCGATAGTCCGTCACCGCCTGCGCGCACGCCTTGATCGCGTGGTAGTCGTCGACGATGCAGAAGCCTCCGGGCGACAGCCGCGGGTAGAGCGCATCGAGCGCCTGAATCGTCGACTCGTAAAGGTCGCCGTCAAGCCGCAGCACCGAAATCCGGTCGATCGGGGCGTCCTGCAGGGTGTCCTTGAACCAGCCCGGAAGAAAACGCACCTGGTCATCCAGCAACCCGTAGCGCTCGAAGTTGGCCTTGACGTGCTCTTGCGGCACACCCAGGATGCGCGCGTGGCGATGCAGCCGGATTCCTTTATCCGCCTTGTAATTGACGGTGTCGGGTGGCGGCACTCCGGCGAACGAATCGCACAACCACACGGTTCGCTTCTCGTCTCCATAGGCGGCCAATACGGCGCGCATCAAGATCGAGGCGCCCCCGCGCCACACACCGCACTCGACCAGATCGCCGGGCACGTCGTCTTCCAGGACCGTCTCGACGCAGTGCTGCAGGCTGGTGAGCCGCTGCATCCCGATCATCGTCAAGGCGTCCGCCGGCCAGTCCAGGCCCAAGTCGCGGGCATTCTTGTTAAATGGCCGCTTGCGCACCAACAGCAAGTTGCGCGTACTGAAGAGGGGACGTCCCAACCGGTACAACCCCACCGGCACCAACTCGTCGCTGCCATACCTGGTGAGGTCACGCCGGAGCAGATCGAGGTATGCAAACCGCGTGTCGTGATCAGTCACGGCCATAACTGCCCCTAACTCCGCGTGCCAGTAATACCGGTAGAGAGCCTAGACGCCCCTCCACGCCATCAAAGCGTTTCGCTGTATCCGTCACCTGTTCCTCAGCGACTTCGCTCGGTGGATACCCCGGGAACGCAGCGCCCCGAACGAGCGAATTCTTCCAACAGATCGACGGCGCGCCCTGCGCTCTCGGCGGGTTTGCTCATCCGGGTCGCCAGCTCACGGGCACGGGTGGCGTACTCCGGGGCAAGGATCGTCCGCAGATCCGCAATCAGAGTTTCGGGGGTGGAGCTCGAGAACCGTCGGGATGTGCCCACCTTCAGTTGCTTGACGCGCGACCCCCACATCGGCTGGTCGCCGGCCGTCCAGAGGATCAGCGACGGGATCCCCGCGCGCAGGCCGGCGGCCGTGGTGCCCGAGCCGCCGTGATGAACGACCGCGCGACAGGCGGGGAAGATTTTCGTGTAGTTGACCACGCCGACGACCTTGACGTGGTCCAGCTGGGGGACATCGCTGAAGTCGCTCCAGCCGGAACAGATCAACGCCCGCTCCCCCAACTCCGCGCAGGCAGCGCCGATCATTCTCACCGTGTCGGCCGGTGATTCGGCGACCGGCATGCTGCCGAAACCGAAGCAGATCGGAGGCGTGCCCTGGGCGATCCACGCCAACACCTCGTCATCGCATTCGGTCGTCAGTTCCATGGTCAACGAGCCCACAAACGGCCGCTGACCACCCCACTTCGCCCATTCGTCGGCCAGCCCCGGGAAGCACACGTCGTCGTAGGCCTGGATTTCCAGCGAACCCCGCTCGGCGATCCGCCGCGGCGAGGCCACCGTTGCGGTAGGAAGGCCGAGCTCGCGCCGCTGACGGTCCTCGGCCTTCTTGTTCATCCGCCAGCACATCCAGTCGTACACGGCCATTCCGGTGCGGACCATGGGCGCGGGCACCCCCGGCACGACCCTGCCGTTGGGCCGCATCGGGATGTAGTGCAGCGTGGCCATCGGAATGCCGTAATAGTCGGCGACGTTGATCGCCAAATCCTGGTAAAGCTGCCCGGTGAACAGCAAATCGGCTCCGGCCCCGATCGACATCAGCGCCGCGCTCATTTCCTGCCAGTTTTTCAGTACCGGTTCCCAGGCCTCCCGTATCAACTTGACCGGGCCCCGGAGGAAGTTCTTGAAGAAGTCGCGGATGAACTCGTCGCTCCAAAAGTCATGCATATCCGGCCCGTACGGAATCGCCGGCACACCGGCCTCCTCGGCCAGATCGACAAGATTGGGCGGCACGGCCATGCGTACCGAGTGGCCTCTGCGCATCAGTTCACGACCGATGGTGAGGCAAGGCTCGATATCGCCACGCGTTCCATAACTTGCCACAGCAAATTTCATCGCGACTTTACCTTAGTCAATCTCCGACGGCGCGGGCAACTTTGACTGCGGCGTTTCCGCTCGGTAATCTGCGGCCCGCCATCTACCCTGGGGCGCGGTCGGCGTCATTGGTTGTCGTTGTTCCACAACGGATTTGGCACCCCGCGGCCACGCGGGATGGTAACGGCGCACCGGAATGGCCGAGTGCGACAAAGCCAACCTCATCGGCCTTCCCCCCGACCGTAGAACTATGACGACCCGTGGGCAGTGTGGCTGAAGCCCAGGTGTCGTCGCCTGATCCTTCCGTAGTCTGCCAGACGATCGACACCGTGTCCGCGAAAACGGGAAGTCGGCCCGGATCCATCCGCGGCATCGCAGCCGATAACAAATTCGACCATTCCCCCAGCACAACGGCCCTGAACTTGTTTGCTGCGTCAGGCGCGACTGCGCGAGCTGGCAAACTTTTCCACCACATCGGCAGCCTTGACGACGCTGTCCGCCGGCTTGGTCATCCGGGCGGAGATCTCGCGTGCCCGTCGGGCGTAATCCGGGGCGAGGATCCGGCTCAGATCCTCCACCAACGATTTGCGATCGGTGGCCGAAAACCGGCGCGTGGTACCAACTTTCAGCCGCTTGAGCTGAGCTCCCCAGATGGTCTGATTGGCATCCATCGACAGGATCAGCGTCGGCACCCCGGCGCGCAGGCTGGCGGCCGTGGTTCCCGAGCCGCCGTGGTGAACGACCGCGCGGCAGGCGGGAAAGATCGTCGCGTAATTCACCGGCCCCACCACCTTGACGTGATCGGCGAGCGGGACGCCGCTGAAGTCGCTCCGCCCGGCGCAGATCAACGCCCGCTCGCCCAGCTGCGTGCAGGCGGAGCTGATCATCTCGACGGTGTCGGCCGGAGATTCCACCGGCATGCTGCCGAAGCCGAAGCAGATCGGCGGTGTCCCCGCGTGAATCCAGGACATCACGTCGTCGTCGGCCTCGGTGGTCAACTCCATCGTCAACGTTCCGACGAACGGTCGCAGGCCATCCCATTTCGCCCATTCATCGGCCAGCCCGGGGAAGCAGGCCTCGTCATAGGCCTGGATTTCCAGTGATCCGCGCTCGGCGATCCGCCGCGGTGACGGCGATGTCGCCTTCGGCAGCCCGAGTTGGCGGCGCTGGGTGTCCTCGACCTTTTTGTTCAGTCGCCAGCAGTACCAGTCGAACGCCGTCATCGCCGAGCGCGCCAACGGCGGCGGCAGGATCGATACGACCTGTCCATTGGGCCGCATGGGGACGTGATGCAAGGTGGCCAAGGGAAGGTCGTAAAACTCCGCGACGTTGGCGGCGGTCTCCTGGTAGCTCTGGCCGGCGAACAGCAGGTCAGCCCCGTCGGCCAACGACATCAGCGTCGTGTTCATCTGCGCCCAGCACTGGTCACTGAGATCCCACATCTCGCGCCACATGCCGCGCATCTCCTGGATCTTCCAGAATCCGCGGAAGAACGAGGTCCAGAAGTTGCGGTAGACGTCCAGCCAGGTCTGCGATTCCAGCCCGTAAGGGACCGCGGTCAGCCCTGCCGCTTCGGTGAAACCCACCGAGTCGGGCGGAACGGCCATGACCATGTCATGGCCCCTGCGCTGCAGTTCGCGGGCGACCACCACGGAGGGCTCGATGTCGCCGCGCGTTCCATAGCTGGCCAGCACACATTTCATCGCGGATCAAAGCCCTTCGGTTGCGCCATCACACTGATGCACCGATCACTTTAGATAGCGCCGAATCCCCACTGCACCGGTTTGCGCGATCGTCACGGCTTGCGCCACAGCACGCCGGTGCCGTCGATCTCCTCGATCTCCGCGGTGACACCGTGAGCCGTGCGGTAATCCGCCACGGCCTGCCGGCATGCGTCGATGGCGTGGTAATCGTCGATGATGCAATACCCGCCGGACGAGAGTCGCGGGTAGAGGGCATCGAGGGCCTGGATGGTCGACTCGTAGAGGTCACCATCGAGACGCAACACCGAAATGCTTTCGATCGGGGCGTCCTGCAGGGTGTCTTTGAACCAGCCCGGAACAAAACGAACCCGGTCATCGAGCAAGCCGTAGTGTTCGAAATTCGCCCTGACCTGCGCCTGGGACACCGCGAGCACCCCGGCGGCGCGATGCAAATTGATGCCTTTGTCGGCTTCGTAGTGCGCGGTGTCCGGCGGCGGCACCCCTTCGAACGAATCGCATAGCCACACGGATCGCTTCTCGTCCCCGTAGGCGGACAACACGGCGCGCATCAGAATCGACGCACCACCGCGCCACACACCGCACTCGACCAGGTCGCCGGGGACGTCTTCCGTCAGGACCGTTTCCACGCAGCGCTGCAGGCTGGTCAACCGCTGCATGCCGATCATCGTCAACGCATCCGCCGGCCAATCCAGGCCTAACTTCCGCGCGTGCTCGTTGAACGGACGCTTGCGGACCAGCATCAGGTTGCGGGTGCTGAAAAGAGGGCGCCCCAGACGGTCCCAGCCCACCGGCACCAACTCGTCGCTGCCGTACCGGGTGAGGTTACGTCGCAGCAGGTCAAGGTAGGCGGATCGGGTGTCGAGGAACGGAGATCGCATGTCACGATCGGCCACGGTCAAAGCTGCCCCCTGGTTCAAAATGAAAGGACTGGCGTGGGTGGTCCCGTCCCTGCCCCTACCGGGGAGTAGCAACCATCATAGGCCGTGATTAGCACTGCCTCCGCTACCGCCAGCCGCGCCAGACCGCAGGTCTCAGCGGCGTCCCGCCTGTTCAACGACGGGGCGGCCCGATTCGTTCGATCCGGCGGCGGCTTCGGGCCGCTCGGCGATCCAGTCGAGCAGCGCGCGCAAACCGTCATCGAGCGAACGCTCGGGGCGCCAACCGAGCTCGTTGATCGCGGGCTCGATGTCGCAGCTCGCTGCGCGCACGTCGCCGTCGCGGAATTTTCCGACGACGGTCGGTTCGGGGGCGTCACACATGGCGGCGATCTTGTTGGCCAGCTCGTGGATGGTGGTGGCCTGGCCGGACCCGATGTCGAGGCAGCGCGGCTGGGTCGCCGGGCGCTGGACCGCCGCGAACAGCGCGTCGACGACGGCGTCGATGTAGACGAAATCGCGCACGATGCGGCCGTCTTCGTAGACCTCCAACGCAAGCCCCTGGCGCGCCAACCGCGCGAAGAGGGCGACGATCCCGGTGTACGAATTGGTCAGCGACTGCCCGGGGCCGTAAACGTTCTGCAACCGCAGCACGCTGAGGTTGGTGTCGTGCGCGGACGTCCAGGCGGCGAGCAGGTGTTCTTGGGCGAGCTTGGTCGCCGCGTACACGTTGGTGGGCCGGGGTTCGGTTCGGTCGGCGCGGCTCGGCAGCGGCGCCGCGTGTTCACCCGCGGGTCCTTGCGGATCCCAGCGGCCCGCGACGAGCTGCGCGTGGCTGCGGGGACGCGGGTAGAAGATCTGCGAGCCGGACTGCCAGGAGCCCTCGCCGTACACCGCCCGCGAGGACGCCAGGACGAGTTGTTCGGGCACGTGTCCCGAGCGGCTCAAGGCGTCCAGGAGTTGGGTGGTGCCGACGACGTTCACCGAGCCGTGCCGCGTCGCCTCCGACAGCGACTGCGCGGTTCCCGTCTCGGCGGCCAGGTGGACCACCTGGGTGGGGCGGAACAATCGCAACACCGCGTCGAAGTCGGGCGCGTGGGTGACGTCCCCGGTGAACAGCCGCGCCGACGGCGGCAGCTCGATCGGCCGATCTCCCCCGTGCACCTGCGGATGCAGCACGTCCATCACGGCGACGTCGTATCCGGCCTCGATGAGACGGCGGGCGAGCGCCGACCCGATGAATCCCGCCCCACCGGTGATGAGCAC

Protein sequences of DBSCAN-SWA_1

>NZ_CP015964|3266030:3275120|3267294_3268074_-|WP_020822880.1|DBSCAN-SWA
MALALITGASSGIGLELAELFAQRGYDLVVAAENDGIFPASTTLSRWGVDVRPVQVDLRTPEGVEKLYQQATEGDRPLDAAALNAGIGGGGSFVEGDLAHDMSIIDLNVRSTVHLAKLVLRNMTRRNAGKVLLTSSLASMAPGPFEAVYHASKSFVQSFAGALQDELRDTGITITSLLPGTIETNFFNRAGMDETRAGQKPKDDPAEVARQGFEAMMRGDRRVVGGSLTTKTVGVALRFLPDSLKAAASRVNSTPAGRR
>NZ_CP015964|3266030:3275120|3269989_3271276_-|WP_081656339.1|DBSCAN-SWA
MKFAVASYGTRGDIEPCLTIGRELMRRGHSVRMAVPPNLVDLAEEAGVPAIPYGPDMHDFWSDEFIRDFFKNFLRGPVKLIREAWEPVLKNWQEMSAALMSIGAGADLLFTGQLYQDLAINVADYYGIPMATLHYIPMRPNGRVVPGVPAPMVRTGMAVYDWMCWRMNKKAEDRQRRELGLPTATVASPRRIAERGSLEIQAYDDVCFPGLADEWAKWGGQRPFVGSLTMELTTECDDEVLAWIAQGTPPICFGFGSMPVAESPADTVRMIGAACAELGERALICSGWSDFSDVPQLDHVKVVGVVNYTKIFPACRAVVHHGGSGTTAAGLRAGIPSLILWTAGDQPMWGSRVKQLKVGTSRRFSSSTPETLIADLRTILAPEYATRARELATRMSKPAESAGRAVDLLEEFARSGRCVPGVSTERSR
>NZ_CP015964|3266030:3275120|3268168_3268924_-|WP_081656377.1|DBSCAN-SWA
MWWVRTEYWLARTLLPDVYANDALITFNNFHAFLDDPEFQRAYQRGARSLGNEDWYQWQWRVHVGLWAAASASKLEGDFVECGVSYGFLSSAIMEYLDWDRLGKTFYLLDTFAGLDPRFVTENERRAGALETSKGHLRNGMYVNGVDSVRANFAQWKNHRIIVGAVPETLEQVDAPSVAYLHIDMNCAPPEVAALRFFWPRLTPGAFVLLDDYANRGRDEQRAAMDEVAGELGVKICTLPTGQGLLIKPAR
>NZ_CP015964|3266030:3275120|3266030_3267287_+|WP_041321039.1|DBSCAN-SWA
MRFALASYGTRGDIEPSAAVGRELVRRGHDVCLAVPPELVGFVESIGLAAVPYGPKVEEFLDEEFLRNMWTDFFRNPIRQVSKVWDPLIKYWGDASTTLKSLADGVDLLSTGLNFEQAAANVAEYYDIPLASLHHFPMRTNGRLVPSVPSPLVRSTMAMIEWLFWRSTKKVDNAQRRELGLPKATHRSQRRIADHGWLEIQTYDDVFFPGLAAEWAKWGSRRPFVGALTMELATDADDDVASWIASGTPPICFGSGSIPVESPTATVEMIGAACAQLGERALICFGGTDFSDVPHFDHVKVVGPVNYASIFPACRAVVHHGGSGTTAASLRAGIPTLALWSSADQPYWAAQIKHLKVGTARRFSATTPGSLVADLRTILAQDYATRARELSARMSKPAESVGTTADLLEDAARRKALA
>NZ_CP015964|3266030:3275120|3274010_3275120_-|WP_008257915.1|DBSCAN-SWA
MLITGGAGFIGSALARRLIEAGYDVAVMDVLHPQVHGGDRPIELPPSARLFTGDVTHAPDFDAVLRLFRPTQVVHLAAETGTAQSLSEATRHGSVNVVGTTQLLDALSRSGHVPEQLVLASSRAVYGEGSWQSGSQIFYPRPRSHAQLVAGRWDPQGPAGEHAAPLPSRADRTEPRPTNVYAATKLAQEHLLAAWTSAHDTNLSVLRLQNVYGPGQSLTNSYTGIVALFARLARQGLALEVYEDGRIVRDFVYIDAVVDALFAAVQRPATQPRCLDIGSGQATTIHELANKIAAMCDAPEPTVVGKFRDGDVRAASCDIEPAINELGWRPERSLDDGLRALLDWIAERPEAAAGSNESGRPVVEQAGRR
>NZ_CP015964|3266030:3275120|3271689_3272958_-|WP_020822885.1|DBSCAN-SWA
MKCVLASYGTRGDIEPSVVVARELQRRGHDMVMAVPPDSVGFTEAAGLTAVPYGLESQTWLDVYRNFWTSFFRGFWKIQEMRGMWREMWDLSDQCWAQMNTTLMSLADGADLLFAGQSYQETAANVAEFYDLPLATLHHVPMRPNGQVVSILPPPLARSAMTAFDWYCWRLNKKVEDTQRRQLGLPKATSPSPRRIAERGSLEIQAYDEACFPGLADEWAKWDGLRPFVGTLTMELTTEADDDVMSWIHAGTPPICFGFGSMPVESPADTVEMISSACTQLGERALICAGRSDFSGVPLADHVKVVGPVNYATIFPACRAVVHHGGSGTTAASLRAGVPTLILSMDANQTIWGAQLKRLKVGTTRRFSATDRKSLVEDLSRILAPDYARRAREISARMTKPADSVVKAADVVEKFASSRSRA
>NZ_CP015964|3266030:3275120|3269087_3269894_-|WP_020822883.1|DBSCAN-SWA
MAVTDHDTRFAYLDLLRRDLTRYGSDELVPVGLYRLGRPLFSTRNLLLVRKRPFNKNARDLGLDWPADALTMIGMQRLTSLQHCVETVLEDDVPGDLVECGVWRGGASILMRAVLAAYGDEKRTVWLCDSFAGVPPPDTVNYKADKGIRLHRHARILGVPQEHVKANFERYGLLDDQVRFLPGWFKDTLQDAPIDRISVLRLDGDLYESTIQALDALYPRLSPGGFCIVDDYHAIKACAQAVTDYRDKHGVTDEIVEIDGTGVLWRKS
>NZ_CP015964|3266030:3275120|3273050_3273857_-|WP_036429273.1|DBSCAN-SWA
MRSPFLDTRSAYLDLLRRNLTRYGSDELVPVGWDRLGRPLFSTRNLMLVRKRPFNEHARKLGLDWPADALTMIGMQRLTSLQRCVETVLTEDVPGDLVECGVWRGGASILMRAVLSAYGDEKRSVWLCDSFEGVPPPDTAHYEADKGINLHRAAGVLAVSQAQVRANFEHYGLLDDRVRFVPGWFKDTLQDAPIESISVLRLDGDLYESTIQALDALYPRLSSGGYCIIDDYHAIDACRQAVADYRTAHGVTAEIEEIDGTGVLWRKP

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041321039.1|3266030_3267287_+	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	4.3e-06	34.4
WP_020822880.1|3267294_3268074_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_081656377.1|3268168_3268924_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_020822883.1|3269087_3269894_-	methyltransferase MtfC	A0A2R8FDY2	Brazilian_cedratvirus	7.6e-57	53.1
WP_081656339.1|3269989_3271276_-	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	1.2e-08	39.0
WP_020822885.1|3271689_3272958_-	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	4.3e-06	38.7
WP_036429273.1|3273050_3273857_-	macrocin O-methyltransferase	A0A2R8FDY2	Brazilian_cedratvirus	1.6e-54	52.2
WP_008257915.1|3274010_3275120_-	NAD-dependent epimerase/dehydratase family protein	M1I1Z9	Acanthocystis_turfacea_Chlorella_virus	1.6e-17	24.1

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP015964|3978079:3984655|DBSCAN-SWA
CCTACAGCATGCAGGACACGCAGCCCTCAACCTCGGTGCCCTCCAACGCCAGCTGGCGAAGACGGATGTAGTACAGCGTCTTGATTCCCTTGCGCCAGGCGTAGATCTGCGCCTTGTTCACGTCGCGGGTGGTGGCCGTGTCCTTGAAGAACAGCGTCAGCGACAGCCCCTGATCCACGTGCTGGGTGGCCGCGGCGTAGGTGTCGATAATCTTCTCGTAGCCGATCTCGTAGGCATCCTGGTAGTACTCCAGGTTGTCGTTGGTCAGATACGGCGCCGGGTAGTAGACGCGGCCGATCTTGCCTTCCTTGCGGATCTCGATCTTGCTCGCCACCGGGTGGATCGAGCTGGTCGAGTGGTTGATGTAGCTGATCGACCCCGTCGGCGGGACGGCCTGCAGGTTCTGATTGTAGATGCCGTGCTCGGCCACCGACTCCTTCAGCCGCCGCCAATCGTCTTGCGTCGGAATGCGAATGCCCGCCTCGGCGAAGATCTCCCGGACCCGCGGGGTGGCCGGCTCCCACACCTGCTCGGTGTACTTGTCGAAGAACTCACCCGAGGCGTATTTCGACCTCTCGAAGCCACCGAACTTGCTTCCCCGTTCGATCGCAATGCGATTCGACGCGCGCAGCGCGTGGTAGAGCACGGTGTAGAAGTAGATGTTGGTGAAGTCGACGCCCTCTTCGGAGCCGTAGTGGATGCGCTCGCGGGCCAGATAGCCGTGCAGGTTCATCTGCCCGAGCCCGATCGCGTGGGACTCGTTGTTGCCCTGCTCGATTGAGGGCACCGAGGTGATGTGCGTCTGATCGCTCACCGCCGTCAGCGCGCGGATCGCCACCTCGATGGTCTGGGCGAAGTCGGGCGAGTCCATCGTCTTGGCGATGTTCAGCGACCCCAGGTTGCACGAAATGTCCTTGCCCACTTTGGCATACGACAGGTCATCGTTGAACACCGACGGCGTGGAGACCTGCAGGATCTCCGAGCACAGGTTCGAGTGGGTGATCTTGCCGTCGATCGGGTTGGCCCGGTTCACCGTGTCCTCGAACATGATGTAGGGGTAGCCGGATTCGAACTGCAGCTCGGCCAGCGTCTGGAAGAACTCGCGCGCCTTGATCTTGGTCTTGCGAATGCGGGCGTCGTCGACCATCTCGTAGTACTTCTCGGTGACCGAGATGTCGGCGAACGGCAGGCCGTACACCCGCTCGACGTCATAGGGCGAGAACAGGTACATGTCCTCGTTCTTCTTGGCCAGCTCGAAGGTGATGTCGGGAATCACCACGCCCAGGCTCAGCGTCTTGATGCGGATCTTCTCGTCGGCGTTCTCGCGCTTGGTGTCCAGGAACCGGTAGATGTCGGGGTGGTGCGCGTGCAGGTACACCGCGCCCGCGCCCTGGCGCGCCCCGAGCTGGTTGGCGTAGGAGAACGAGTCCTCGAGCAGCTTCATGATCGGGATGACGCCCGAGGACTGGTTCTCGATGTTCTTGATCGGCGCGCCGTGCTCGCGAATGTTGCTCAGCAACAACGCAACTCCCCCGCCGCGCTTGGACAGCTGCAGCGCGGAGTTGATCGATCGCCCGATGGACTCCATGTTGTCTTCGATGCGCAGCAGAAAGCAGCTCACAGGCTCGCCGCGCTGCTTTTTGCCCGAGTTCAAAAACGTCGGGGTGGCCGGCTGGAACCGTCCGTCGATGATCTCGTCGACGAGCTTCTCGGCGAGGATGGTGTCACCGGAGGCCAGCGTCAGCGCCACCATGACGACGCGGTCCTCGAAGCGCTCCAGGTAGCGCTTCCCGTCGAACGTCTTCAGCGTGTAGGAGGTGTAGTACTTGAACGCGCCCAGGAACGTCGGGAACCGGAACTTCTTGGCGTAGGCCCGGTCCAGCAGCGTCTTGACGAAGTTGCGGCTGTACTGGTCGAGAACCTCGCGCTCGTAATAGTTCTCCTTGATCAGGTAGTCGAGCTTCTCGTCCTGATTGTGGAAGAACACCGTGTTCTGGTTGACGTGCTGCAGGAAGTACTGATGTGCGGCCTCGCGGTCCTTGTCGAACTGAATCTTGCCGTCCGCGTCGTACAGATTCAGCATCGCGTTGAGCGCGTGGTAATCCGTCTCCCCCGGCAACGCGTGGGCTCCGGTGGTTACAGGCTCTGCAGCGACGGTTGTTGACACGTCTGTTCCTTCCAGAAATCGGCTAAGCCCGCGCGGACGGCATCCACGTCGTCCTGCGTTCCCATGAGTTCGAAGCGGTAGAGGTACGGGACGCCGCACTTGCGTGAGATCACGTCGCCCGCGTAGGCGAATTCGGCGCCGAAGTTGTTGTTGCCCGCGGCGATGACGCCGCGGATCAACGAACGGTTGTGCTCATTGTTCAAAAAGGCGATGACCTGTTTGGGGACATAGCCGCCGGCGTTGAGGTCAGGAGTGGCCCGCCCGCCGCCGTAGGTGGGCAGCACCAGGACGTACGGCTGGTCCACCTCGATACGGCCGTGCAGCGGTATCCGCGTGGCGGGAATCCCCAGCTTCTCCACAAAGCGGTGGGTGTTCTCCGACACGGAGGAGAAATAGACCAGGTTGCGCCCCGTGGTGTCCATGGTGCGGCAACTCCTTACCTAACGTCTTGCCTTACGCGCTGAGTTCCACCGCGGCGAGCGCCTTGATGCGATCGGGCCGGAAACCCGACCAGTGGTCGTTGCCGGCCACCACGACGGGAGCCTGCAGATAGCCCAGCGCCATCACGTAATCACGCGCCTCGGAGTCCAACGTGATGTCGACCGTGTCGTAGACGATGCCCTGCTTGTCCAGCGCCTTGTAGGTGGCGCTGCACTGCACGCATGCCGGCTTGGTGTACACGGTGATGCTCATAGAATGCCGCTCCTTTGCGGAAGAGGGGGACCCAATGGACTGGCAACTACTTTTGGACTGCGTCTTTGCTAGGTTCAGCGATCCGGCAGGCGCCCAGATTCCCGTCCTGCGGCGACCAGTGCCGAAGACCTGTCTTCGACCGCTTCGCGCCGATTTCGGGGGGTTCACCGAGCCTGGCTGGCTTGGCGATCCTGGGATCCGCCGGTGCATCGAAACACTACACCTAGTGGCTGACAAGATGTCGAGATACAAGATGTTCTGAATAACATTTCTGAAATTCCCTGGTCGTAAGGCCTGTGTCGAACAAATTCGGGAACCCGCCCCGGCGTGTCGCAGATCACACGCCGAGGCCAAGGCGCCTCCAGATATCGGTATAGCAGCGGCCACCGACAACCCCGGTTTCGAACCGCTGGCCACGACGGGCCCAGCGACAGCTAGCAAAGCCGCCAGACGGTGCTGGCGGCTTTGGCTATTCGTCGGCGGCAACCCCGCTGGTCACCTCCCGGACGGCTTGTCGACTTCCGCCAATCAGCCGGCTTCGGCGGCGAGCTTGCCCACCACGTCGCGCACGTTCGCCGACAGCTCGGCGTGCTCGGCGGGCGCCCTGCCTTCCAGCGTCTTGAACGGCACGGACAGTTTGATCGAATCGACGACCCGCGCGCCGGCGATGCCGAAGGACTTGCGGGTCTCGTCGTGCGCCCACACGCCGCCGTACTGGCCGAAGGATCCGCCGATGACGGCCAGCGGCTTGCCCTTCAGCGCACCGTCGCCAAACGGGCGCGACAGCCAGTCGATCGCGTTCTTCACCACCGCCGGGATGCTGCCGTTGTACTCGGGTGTGACCACCAGGGCGGCGTCGGCGTCGGCGGCCGCGGCGCGCAGCGCGGCCACCGGGGCCAGGGGCGGCGCGTCGGCGTTCATCGCGTCGTCGATCTCCTCGTTGTAGAACGGCAGGTCGGCGAGCCCCTCGAAGAGCGTGACGCTGACGCCGTCGGAGGCGACCGCCGCTGCCAATTCGGCGATCTGGCGGTTGATCGACGCCGCGCGCAGGCTTCCCACTAACGCCAAGATTTTGATTGCCACTCTCGCAGTTCCCTTCGGTCGTTGGTATACATCCTCGCACGACCTAAACGGACTGTGGTCCGATTTATTCCGCCGGCGTTAAAGTGCAGGGGTGAGCGGCGTCGAACGGTCGGGCGAGTTGCCGATGTGCGTGCCGCAGCTGCCGGCGCAGGAGCGGGGCGACGCCCTGCGCAACCGCGCGCTGTTGCTGGATGCGGCGCGTCGCCTGGTCGCCGAGCGCGGGGCCGACGCCGTCACCATGGACGACGTCGCCGCCGCCGCCGGCGTCGGCAAAGGCACCCTGTTCCGCCGGTTCGGCAGCCGGGCCCGCCTGATGATGGTGCTGCTCGACGAGGACGAACGCGCCAGCCAAGAGGCGTTTCTGTTTGGTCCCCCGCCGCTGGGGCCCGACGCCCCGCCGTTGGATCGGCTGGTGGCCTTCGGCCGGGAACGGATGCGCTTCGCCCACACCCATCACGCGCTGCTGTCGGCGGCCAACCGCGACCCGCGGACCCGCTATGGGCCGCCGGCCGCCGTCCTGCGCAGGCACGTGCGCGTGCTGCTGGCCTCGGCGGAGACGTCCGGCGACCTCGTGGTCCAGGCCGACGCCCTGCTCGCCCTCCTCGACACCGATTACGTGGAGCATCAGCTGAACGACGGCGGTCACACCCTGCAGACGTTGGGCGACGCGTGGGAAAGCTTGGCGCGCAAGCTTTGTGGGAGGTGAACGTCGGCATGTCCGCGGCGGCACGCGATTGGGTCCTGCACGTGGACCTCGACCAATTCCTGGCGTCGGTCGAGTTGCGCCGTCGCCCCGAATTGGCCGGGCTGCCCGTCATCGTCGGCGGCAGCGGTGATCCGAACGAACCGCGCAAGGTCGTCACCTGCGCCTCCTACGAGGCCCGGGAATTCGGTGTGCGGGCGGGCATGCCACTGCGCGCGGCGGCCCGCCGCTGCCCGGATGCGACCTTCCTCCCCTCCGACCCGGCCGCCTACGACGCGGCGTCCGGTGAAGTGATGGGCCTGCTGCGGGATCTGGGCCATCCGGTGGAGGTGTGGGGATGGGACGAGGCCTACGTCGCCGTCCACGCCGAGGACCCCGGCGAGGTGGCACAACAGATCCGCAGCGTCATCTCCACCGAAACCGGACTGTCCTGCTCGGTCGGCATCAGCGACAACAAGCAGCGCGCCAAGGTTGCCACCGGATTCGCCAAGCCGGACGGCGTTTTCGTGCTCACCGATGCGAATTGGATGGCGCTGATGGCCGACCGTCCGGTCGACGCGCTGTGGGGCGTGGGGCCCAAGACCGCGAAAAAGCTTGCGGATCTTGAGATTACGACGGTGTGGAAACTGGCCCACAGCGACGCCGAGTTGTTGACGGCCACGTTCGGGGCGCGCACCGGGCTGTGGCTCCTGCTGTTGGCCAAGGGTGGGGGTGACAGCCACGTCAGCGCCGAGCCGTGGGTGCCGCGCTCGCGCAGCCACGTCGTCACCTTTCCCCGCGACCTCACCGATCGCGCCGAGATGAACGCGGCCGTAACGGGTTTGGCCGAACAAGCGCTGGACGACGTGCTGGCCGAAGCGCGGGTCGTGACGCGGGTGGCGGTCACCGTGCGAACCTCAACCTTCTACACCCGCACCAAGATTCGCAAACTCGACGCGCCCACCACCGATCGCGACACGATCGTCGCTGCCGCCTTGCGCGTCCTGGATTTATTCTCCCTCGACCGCCCGGTTCGCCTGCTCGGGGTGCGGCTGGAATTGCTCATGCCGGACTAGCGGCGCCGGGTTGGGCGGGCCGGGCCGCAGGGCGCGGGTGAAGATCACGTTCACCCGGCGCATGGCGACGCTATACGGCCACCACGCAAGCCTTTTGAACGCGTAGAGCGCCCGGATGTCGGCCGAGGTGTAGATCAGGTATCGGTTCTTGGCCACGCCGGCAAGGATCTTCTCGGCGGCCTTCTCCGGCGACACGGCGTGGCCGGCGAATCGCCGTATCCACCGGGCGACGTTGGGATCCTCGCGGTCCACACCGGCGATCTCCACGGTCCCCACCAGCGGGGTGTTCACCGCGCCGGGCACCACCAGCGACACCCCGATGCGGTGGCGGGCCAAATCGAAACGCAGCACCTCCGAGACGCCGCGCAATCCGTACTTGCTGGCGCTGTAGGCGGCGTGCCAGGGCAGGGCGACCAACCCGGCCGCCGAGGACACGTTGACCAGATGGCCGCCCCGCTTGGCCGCCACCATCGGCGGCACGAACGTCTCGATGACGTGGATCGGGCCCATCAGGTTGATGGCGACCATCTTGCTCCACTGCTCGTGGGTCAGCCGGTCGACGGTGCCCCAGGCGGATACGCCGGCGATGTTGAGCACTACGTCCATGGCCGGATGCGCGGCGTGGATGTCGGCGGCGAACGCGGCCACCTGGTCGTAGTCGGCGATATCGAGCGCCCGATGCTTTCGGACCTGCGCGCCCAGGGCGCGCGCGTCGGCCACCGTCAGTGCCAGACCGTCGGAGTCGCGGTCGGTCAGATAGAGCTCGGCCCCCTGGGCAGCGAGCCGCAATGCCGTCGCGCGGCCGATGCCGCTGGCCGCGCCGGTGACAAAGCACCGCTTTCCCGCGAAATACCGCCCGGACGCCTTGTTCGCCAT

Protein sequences of DBSCAN-SWA_2

>NZ_CP015964|3978079:3984655|3980214_3980667_-|WP_008259183.1|DBSCAN-SWA
MDTTGRNLVYFSSVSENTHRFVEKLGIPATRIPLHGRIEVDQPYVLVLPTYGGGRATPDLNAGGYVPKQVIAFLNNEHNRSLIRGVIAAGNNNFGAEFAYAGDVISRKCGVPYLYRFELMGTQDDVDAVRAGLADFWKEQTCQQPSLQSL
>NZ_CP015964|3978079:3984655|3983713_3984655_-|WP_036453601.1|DBSCAN-SWA
MANKASGRYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDSDGLALTVADARALGAQVRKHRALDIADYDQVAAFAADIHAAHPAMDVVLNIAGVSAWGTVDRLTHEQWSKMVAINLMGPIHVIETFVPPMVAAKRGGHLVNVSSAAGLVALPWHAAYSASKYGLRGVSEVLRFDLARHRIGVSLVVPGAVNTPLVGTVEIAGVDREDPNVARWIRRFAGHAVSPEKAAEKILAGVAKNRYLIYTSADIRALYAFKRLAWWPYSVAMRRVNVIFTRALRPGPPNPAPLVRHEQFQPHPEQANRAVEGE
>NZ_CP015964|3978079:3984655|3982735_3983779_+|WP_036455243.1|DBSCAN-SWA
MSAAARDWVLHVDLDQFLASVELRRRPELAGLPVIVGGSGDPNEPRKVVTCASYEAREFGVRAGMPLRAAARRCPDATFLPSDPAAYDAASGEVMGLLRDLGHPVEVWGWDEAYVAVHAEDPGEVAQQIRSVISTETGLSCSVGISDNKQRAKVATGFAKPDGVFVLTDANWMALMADRPVDALWGVGPKTAKKLADLEITTVWKLAHSDAELLTATFGARTGLWLLLLAKGGGDSHVSAEPWVPRSRSHVVTFPRDLTDRAEMNAAVTGLAEQALDDVLAEARVVTRVAVTVRTSTFYTRTKIRKLDAPTTDRDTIVAAALRVLDLFSLDRPVRLLGVRLELLMPD
>NZ_CP015964|3978079:3984655|3978079_3980245_-|WP_036453596.1|DBSCAN-SWA
MSTTVAAEPVTTGAHALPGETDYHALNAMLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIKENYYEREVLDQYSRNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLASGDTILAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGLPFADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGKITHSNLCSEILQVSTPSVFNDDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRALTAVSDQTHITSVPSIEQGNNESHAIGLGQMNLHGYLARERIHYGSEEGVDFTNIYFYTVLYHALRASNRIAIERGSKFGGFERSKYASGEFFDKYTEQVWEPATPRVREIFAEAGIRIPTQDDWRRLKESVAEHGIYNQNLQAVPPTGSISYINHSTSSIHPVASKIEIRKEGKIGRVYYPAPYLTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQIYAWRKGIKTLYYIRLRQLALEGTEVEGCVSCML
>NZ_CP015964|3978079:3984655|3980698_3980938_-|WP_008259184.1|DBSCAN-SWA
MSITVYTKPACVQCSATYKALDKQGIVYDTVDITLDSEARDYVMALGYLQAPVVVAGNDHWSGFRPDRIKALAAVELSA
>NZ_CP015964|3978079:3984655|3982112_3982727_+|WP_020823273.1|DBSCAN-SWA
MSGVERSGELPMCVPQLPAQERGDALRNRALLLDAARRLVAERGADAVTMDDVAAAAGVGKGTLFRRFGSRARLMMVLLDEDERASQEAFLFGPPPLGPDAPPLDRLVAFGRERMRFAHTHHALLSAANRDPRTRYGPPAAVLRRHVRVLLASAETSGDLVVQADALLALLDTDYVEHQLNDGGHTLQTLGDAWESLARKLCGR
>NZ_CP015964|3978079:3984655|3981466_3982021_-|WP_036453598.1|DBSCAN-SWA
MAIKILALVGSLRAASINRQIAELAAAVASDGVSVTLFEGLADLPFYNEEIDDAMNADAPPLAPVAALRAAAADADAALVVTPEYNGSIPAVVKNAIDWLSRPFGDGALKGKPLAVIGGSFGQYGGVWAHDETRKSFGIAGARVVDSIKLSVPFKTLEGRAPAEHAELSANVRDVVGKLAAEAG

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_036453596.1|3978079_3980245_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.5e-208	51.7
WP_008259183.1|3980214_3980667_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	5.8e-14	40.2
WP_008259184.1|3980698_3980938_-	redoxin NrdH	V5UN81	Mycobacterium_phage	1.3e-20	63.2
WP_036453598.1|3981466_3982021_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	1.2e-05	34.4
WP_020823273.1|3982112_3982727_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_036455243.1|3982735_3983779_+	DNA polymerase IV	F1C5A5	Cronobacter_phage	1.1e-20	28.8
WP_036453601.1|3983713_3984655_-	SDR family oxidoreductase	W8CYX9	Bacillus_phage	1.2e-05	28.8

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NZ_CP015964|4490015:4500054|DBSCAN-SWA
CATGACCGGCGCCGAATCGATCAAGGTCCCCTGCGAGCCCGACGAGCTGCGCAGCCTGTTTCTGTTCGAGGCGCTCACCGACGAGCAGCTTGCGGTGCTGTGCGCGGCGGGCCACATCGAAACCTACGAACCGGGCCCGATCTGCGTCGAAGGCGAACCGGCGACCTGCTTCTACGTGCTGATCGAGGGCGAGCTGATGATGTCCAAGCTCTCCGGCGGCCAGGACATCGAGACCAACCGCACCTCGCAGCGCGGCGTGTACTGCGGGGCCTGGCGGGCGTTCACCGGCGGAAAACAGAAGAGCTACGACGCCTCGGTGCACGTGACCCGGCCGTCGCGGTTCTTCGTGATGGACGCGCCGGTGTTCGCCCAATTCATGCGCGACCAGTTCCCGATGGCCGTCCACCTGCTCGACGGCATCGCCGTCGGCACCGACCGGACCCGCCGCATCATCGACAACCGGGAGAAGCTGCTGGCGCTGGGCCGCCTGTCGGCCGGGCTGACCCACCAGCTCAACAACCCGGCCGCGGCGATCTCGCGGGCCGCGTCGGATCTGCGCGAACGGGTGGCCAGCATGCGGCACAAGCTGGCGATGCTCGCCGACGGCACCGTCTCCCCCGAGGCGCTCAGCGCCCTGGTCCGGCTGCAGGAGAGGGTCGCCGAGCAGGTCGCGAAGTCCGCCTCGCAGCATCTGAGCGCGCTGGAGACCGCCGACCGCGAGGACGCCGTCGGCGACTGGCTGGAGGCCCACGGCATCGACGGCGGCTGGGACATCGCGCCGACGTTCGTCGAGGGCGGCATCGACACCGATTGGCTGGAGCGGATTTCCGCGGTCAGCGAGGAGCTCGCGTCGACGTCGGCGGAGCAGGCGATCCGGTGGATCAACTACACCATCGAGAGCGAACTGCTGATGAACCAGATCCTCGAAGCGAGCAAACGGATTTCGGCCCTGGTCGCCGACGCCAAACAGTATTCGCAGCTGGATCGCGCGCCGTTCCAGGTGACCAACGTGCACGAGCTGCTGCGCAGCACGCTGGTGATGTTCGCCGACCGGCTGACCAAGGACGGCGGCAAAAACTCGCACGCCATCGCCGTGGTCAAGGACTTCGACCAGTCGCTTCCCGAAATCCCTTGCTATCCGGGTGATCTCAATCAAGTGTGGACCAACATCATCGACAACGCGATCGCCGCGATGCGCGATACCGGCGGCACGCTGACCATCCGCACCTGCCGGGAAGGCGAGCACATGGCCCGCGTCGAGATCTGCGACACCGGCCCGGGCATACCCGAGGACGTGCGCGAGCACATCTTCGAGCCGTTCTTCACCACCAAGCCGTTCGGCGAGGGCACCGGCCTGGGCCTGGATCTGGCGTTCAACATCGTGGTCAAGAAGCATCGCGGGGACCTGCGGGTGGAATCGGCGCCCGGCGACACCCGATTCATCGTGCTGCTGCCGCTGCAACCGCCCGCCGCCGACGTCGCCCCCGACCTCGACGGCCCGGAAGAAAACGTCACGACCCCGGAATAGGACTGGAATAGGGCCGCACCGCGCCCGGTTGGGAAGACCATGACCGATGCAGCAAGCAAGCCCGATCTCGGCCGGTTCGGATCGTTCGGACGCGGCGTCACACCCCAGCAGGCCAAGGACATCGAGGCGCTGGGCTACGGGGCCGTCTGGGTCGGCGGGTCGCCTCCCGCCGAGCTGTCCTGGGTCGAACCCCTCCTGGAAGCCACGACGACGTTGCAGGTGGGCACCGGCATCGTCAACATCTGGACCGCGGCCGCGGGGCCCGTCGCCGAGTCCTTCCACCGCATCGACAAGGCGTACCCGGGCCGCTTCCTGCTGGGCATCGGCGTCGGCCATCCCGAGGCTCACACCGAGTACCGCAAGCCCTACGACGCCCTGGTGGACTACCTGAAGCAGCTCGACGACTACGGGGTGCCCGCCAACCGCCGGGTCGTCGCCGCGCTCGGGCCGCGCGTGCTGCGGCTGTCCGCGGAGCGCTCCGCCGGAGCACACCCCTACCTGACCACGCCGGAACACACCGCGCGGGCCCGCGAGATCATCGGCCCGTCGGCGTTCCTGGCCCCCGAGCACAAGGCGATCCTGACCACCGACGCCGAGAAGGCACGGGCCGTCGGCCGCAAGGCGCTCGACGTCTATTTCAATCTCGCCAACTACCGAAACAACTGGAAGCGGCTGGGTTTCGGCGAGGACGAGGTCACCCGGCCGGGCAGCGACCGGCTGGTGGACGCGGTGGTGGCCTATGGCACCGTGGACCAGATCGCGGCGCGGCTCACCGAGCACCTCGAGGCCGGCGCCGATCACGTCCCGGTGCAGGTCCTGACCAAGGATGAAAACCTGATCTCGGCGCTGGCCGAACTGGCGGGGCCACTGGGACTGAATCCGTCCTGACGACCGGCAGGGGGAGCTGGATGACCGAGGGAGTTTCGCTCAAGCCCGACCTGGGCCAGTTCGGCGTGTGGCTGCCGACGCGATCCATCCAACCCGAGTTGGCGGCGGGGATCGAATCGCTGGGCTACGGCGCCGCCTGGATCGGCGGCTCGCCGGACGCCGAGTTGTCCTGGGTCGAACCCGCCCTGGCGCGCACCACGTCGCTGCAGCTGGCCACCGGAATCGTCAACATCTGGTCGGCGCCCGCCGCGGCCGTCGCCGAGTCGTTCCGCCGCATCGAAACTCACCACCCGGGAAGGTTTTTGCTCGGCGTCGGGGTCGGCCACCCCGAGCACACCGGAGAGTACGTCAAACCGTACGACGCCCTGGTCTCCTACCTCGACGAACTCGACGCGGCGCTGGTGCCGACCAGCCGCCGGGTGGTCGCCGCGCTCGGGCCGCGGGTGCTGCGGCTCGCCGCGCGACGCAGCGCCGGCGCACATCCCTACCTGACCACCCCGGAACACACGGCCAGGGCGCGCGAGTTGCTCGGCGGGGCAGTGTATTTCGCGCCCGAGCACAAGGTGGTGCTGAGCACGGACGCCGAACAGGCCCGCGAGATCGGCCGCCAGACCGTCGAGCATTATCTGGGCCTGAGCAACTACGTGAACAATTGGCTGCGGCTGGGGTTCACCGAAGCCGACGTGCGCACGCCCGGCAGCGACCGGTTGATCGACGCGGTGGTCGCCCACGGCACCCCGGAGGCGATCGCGGGCCGGCTGCGCGAGCACCTGGACGCCGGGGCCGACCACGTGGCCATCCAGGTGCTGGGCGGCTATTCCAAAGAAACCCTGCTACCTGCGCTGACCGAATTGGCCGGCGCTCTGGGGCTAACTGCCGCAAACTGACCCATCGGCTCGGTTAGGGTTTGGGGCATGCGGTTACTGGTCACCGGCGGCGCTGGTTTCATCGGCGCCAATTTCGTGCACAGCACCGTTCGCGAGCACCCCGAGGACTCCGTGACCGTGCTCGACGCCCTGACCTATGCGGGCCGGCGCGAGTCACTGGCCGGCGTCGAGGACGCCATCGAGCTGGTGGTCGGCGACATCACCGATGCCGAACTGGTGTCGCGGCTGGTCGCCGAATCCGACGCCGTGGTGCACTTCGCCGCGGAGAGCCACGTCGACAATGCGCTGGAGGGCCCCGAGCCGTTCCTGCACACCAACGTGGTCGGCACCTTCACCATCCTCGAAGCGGTGCGGCGTTACGGTGTGCGGCTGCACCACATCTCGACCGACGAGGTCTACGGCGACCTGGAGCTCGACGACCCCCAGCGGTTCACCGAGGCGACGCCGTACAACCCGTCCAGCCCCTATTCGGCGACCAAGGCCGCCGCCGACATGCTGGTGCGGGCCTGGGTGCGCTCATACGGGGTGCGCGCGACGATCTCGAACTGCTCCAACAACTACGGGCCGTATCAGCACGTCGAGAAGTTCATCCCGCGGCAGATCACCAACGTGCTCACCGGGCGGCGGCCCAAGCTCTACGGCGCCGGCGCCAACGTCCGGGACTGGATCCACGTCGACGACCACAACAGCGCGGTGCGGCGCATCCTGGAGAAGGGCGAGATCGGCCGGACGTATTTGATCAGCTCCGAGGGCGAGCGCGACAACCTGACCGTGTTGCGGACGCTGCTGCAGATGATGGGCCGCGAACCCGACGACTTCGACCATGTCACCGATCGCGCCGGCCACGACCTGCGCTACGCGATCGACCCATCGACGCTGTACGACGAATTGTGTTGGGCGCCAAAGCATACCGACTTCGAGGAGGGGCTGCGTGAGACCATCGACTGGTACCGCGCGAACGAATCATGGTGGCGCCCGTTGAAGGACGCCTCCGAAGCCCGCTACGAAGAACGTGGGCAGTGACGTGGAAGTTCGCGAGCTGAAAGTTCCCGGCGCCTGGGAGATCACCCCCGCCGTTCATGGCGATTCGCGGGGCCATTTCTTCGAATGGCTGACCGACAAGGGATTCAGGTCCTTCGCCGGTCACCGGTTGGATGTTCGACAGGCCAATTGCTCGGTGTCATCGGCCGGCGTGCTGCGCGGCCTGCACTTCGCCCAGGTACCGCCGAGCCAGGCCAAGTACGTGACCTGCGTGCGCGGGGCGGTATTCGACGTCGTCGTCGACATCCGGGTGGGCTCACCGACATTCGGTCAGTGGGACTCGGTGCTGCTCGACGACACCGAGCACAGGACGATCTACCTCTCCGAGGGCCTCGGACACGGTTTCCTGGCGCTGCAAGACAATTCGACGGTGATGTACTTGTGCTCGGCGGAATACAACCCGCAACGCGAACACACCATTTGCGCAACCGATCCGGCGCTGGGGATCGATTGGCCGCTGGTGGACGGCGCACCGCCCACCCTGTCCGACCGCGACGCCACGGCCCCCAGCCTCGACGACGTACGCGCCTCCGGCCTGCTCCCCACCTGGGAGGAGACGAACGCGTTCGTCGAGGGTTTGCGGGCAAAGCCCGCGAATTGACGCGGGCGAGCGGCGTCGCCCATTCGAGCGATGTGCGTTATCCCGCACCATTGTTGACGCGCGCGGCGCGCAAAATCATTTTCACCGCCTGAGCTGCCTATTAGACGCATATCTATTAACGTTCCCATTGCGGGCGCCGAATTGGACCAGTACCGTAAACCGGCCCAATTCAGTATTCGGTGGCGCTAGGATTGCGCCGATGATGCCGATGACGCCCTGTTCAAATGGCGGGAACCGTCAATGAAACTCGGGCAGGTGTTCGATCCGCGCCGCAATGCGCTGAACGCATGGCGGTTAGCGCTCGCGGGCGAGGTCATTTTCTGGCACACCTACCCGATCCGGGGTCATCTCCCTTCGGTGCGGGCGGTTCTTCAACTGCTGCTCTGCGTCGGCGTCGACGGATTCTTCGCGATTTCGGGATTCCTCATCACCGCGAGTTGGATCAGCAACCCTCGGCTCCGCGAGTATCTCGCCGCTCGCGCCCTTCGCATCCTGCCCGGCTTCTACGTCTGCATGATCGTGACCGCGTTCGTCTTCGCCCCATTGAGCGTGGCGATCCAGGGCGGCTCGGCGGCAAGGCTGCTCTTCTCGTTCGCTCCGTTCGAGTACGTGCTGAAGAACATCGCCGTGATGTGGCTCAAATTCGATGTCGGAGGCACTCCGCACGGGATCCCCAATGCCGGCATCTGGAACGCTTCCCTGTGGTCGCTCTTCTGGGAAGTGATGTGCTATGTCGTCGTCGCCGTCATCGGCGTGGCCGGGCTCGCCAATCGCCGATGGGTTTCATTAACGATTTTGGTGGTGGCGGCGATCGGCGCGTCACTCATGCCGCCCGTCCGGTTCCCCGACGTGTTCCATCACCCCGAGGGCAACATAGCGACCACTCTCATCTTCATGGCGTGCCGCGCCGCCATCATGTTTGCGGCTGGAGCGTTCTTGTATCAATGGCGGGACGTGATTCCCGCTCGCTGGTCGCTGGTCGCGGTGAGCGTGGTCATCGTGCTGGCGGCCGGCCAGCTGCCGGACTACCGGGTGGTCGCCGCCATCCCGCTCGCCTATGCCGTCGTCGTCTCGGGCTCCCTGCTGCAAAGCAAGCGGTTGAGATTGCGTACCGACCTGTCCTACGGCATGTACATCTACGCCTTCCCGATCCAGCAGTTGCTGCTCGTCCTCGGGTTGATCAGCCTCACCCCCATCGTGTTCTGCCTCACCGTCGCGGTAGCGACCCTGCCGCTGGCCGCGGCAAGCTGGTTCCTCATTGAGAAACCGGCCAGGTCCCTGAAGTCGCGTTTCAAAGGGAAACCTTTGGCCTCCCGGTCGCAAGCGCCGGTCGCATTGCCACCAGAGGTCTCGGGTGCTGCTTAGCACCGGTCACGGCCTGTATCGACGTTAGGTCACCGGTCCACCGGCACGTCGTTTTGGTCATTGTCGCCCGACCGAGCCCGCCTATGTCGCCCGACCGATACGATGGCGCCCGAGGGAGCGCGGCGTACACGTGGACGGAGGCCGATGAAACTCGGGCAGGTATTCGATCCGCGCAAAAACGCGCTGAACGCACTGAGATTGGCGCTGGCGGCCGAGGTGATGCTGTTCCATTCCTGGCCGATCACCGGCCACATGCCGCCGAAATCTACCCTGCAACTTTTCTTCTCGGTGGGTGTTGACGGATTTTTCGCGATCTCCGGCTTCCTCATCACCAGGAGTTGGATCAGTGATCCGCGACTGCGCGACTACCTTGCGGCCCGCGCGCTTCGTATCCTTCCTGGCTTCTACATCTGCCTGATCGCGACCGCGTTCGTTTTCGCCCCGCTCAGCGTGGCCATCCAGGGCGGCTCGGCCGCCAAGCTGCTCGGGTCCACCGCGCCACTCGAGTACGTCGTGAAAAACGCCGCTGTCGCCTACTTGCAGGTCGATGTCGGCGGCACCCCGCGCTTCGTGCCGGGCGGACCGACCTGGAATGGCTCGCTGTGGTCATTGATCTGGGAACTGCTGTGCTACCTCGCCGTCGCCGTGATCGGCGTAGCCGGATTGGCTAATCGCCGGTGGATTTCTGCCGTGATCCTGGCCCTGGCTACGGGTCTGGCGCTGATACTTCCGCCGCTGACATTTCCGGGCGTGTGGACCATCCCGCAGCTCGCGGTGCGCGCAGCCATCATGTTTTCGGCGGGCGCGGTCATGTACCAGTGGCGAGACCTGATCCCAGCTCGCTGGTCACTCGTCGCCATCAGTCTCGTGATCGTGGCGGGCGCCGGGTTCCTGCCCGACTACCGGGTCGTTGGTGCCCTGCCCCTGGCCTACGCAGTCATCGTGTCGGGTGCCCTACTGAAGAACGACCGGTTGAGACTGCGTACGGATCTGTCCTACGGCCTGTACATCTATGCATTCCCGACCCAGCAGTTGCTGGCCGTCTGCGGGCTCGCGACTCGCCTCCATCCCGCGGTGTTCTTCCTCGTCGCCGTCGCGGCCAGCTTGCCGCTGGCCGCTGCAAGCTGGTTCCTCGTCGAAAAACCCTCGATGTCGCTCAAACGCCGGCTCAAACGGAGGTGGTCCGCCCCCGTAACCTCCAGCTCCGAGGAGCCGCCCCCCGCCAGCAAAGCCGACGTCATTGGCGACCGGCCCGGTCCGGGTTTGAGCGAAACCGCCTAGCTCCCAATGACCTTCAAAAACAGCTGAAAACGCCAGTCGTCCCGGCAGAGTGACATAGACTGCCGCCGACAGCTGGGGGCAACGGGTGGAGGTCTATGAAGCTCGGGCAGGCATTCGATACGCGCGATAACGCACTCAACGCATGGCGGTTGGTGCTGGCGATTTCGGTGATCCTCGGGCACTCGTTTACTGTCACGGGCCGCCCGTCGCCGACCGGGATCGTCGGACATCTGCTTGGCGCCGGAGGGGTCGACGGGTTCTTTGCGGTCTCGGGATTCCTCATCACCGCTAGTTGGCTGCGCCAACCGCACCTGCGGGAATACCTGACGGCGCGAGCTCTTCGCATCCTGCCCGGGTACTACGTGTGCCTGATCGTCACGGCCTTCATCATCGCTCCCGTCGGTGTGGCAATTCAGGGTGGCGCAGCGCTGAAGCTCCTCTTCTCAGCCGCGCCCTTCCAGTACGTCTTGATGAACATCGCGGTGGCGACGCTCAAGGTCGACGTCGGCGGAACACCAACTGGGATCCCTTATCCGGGAACGTGGAACAGTTCGCTGTGGACGCTTATGTTCGAGATCGCCTGCTACTTCGTCGTTGCCGGCCTCGGGGTGGCCGGGCTCGCCAATCGCCGCTGGGTCTCGCCCACGATCCTGGTGACAGCGGTAATCTGCGCAGCGTTGGTGCCGCCCTTCAAACTGCAGGCGGAATTCACGCTCCAATTTGCCGCCGCCAGCGCCCGCTTCGCCATCATGTTCGCGGCGGGAGCGCTCCTCTACCAGTGGCGAGACGTCATTCCGGCGCGGTGGTGGCTCGTCGGGGTGAGTGTCGCAGTCGTCCTGCTGGGCGGGACCGTACTGCCGGATTACCGCAGGCTCGGCGGCATACCGCTTGCGTACGCGATCATCGTCTCGGGCGCACTCATCCGAAACAAGCGCTTGAGGTTACGTACGGATCTCTCTTATGGCGTGTACATCTACGCGTTCCCGACTCAACAGTTGCTGGTGATCTGTGGGGTTGGCGTTCTGAATCCGAACGTGTTCTCGATAGTGGCCACACTGTGCACCCTTCCGCTGGCCGCGCTGAGCTGGTTCGTCATCGAAAAGCCTGCGATGTCTCTCAAACGCCGACTCAAAAAGAGGTGGTCCGGGCCCGCCGCGGCCGAAACGGACCCCAGGGTGGCAGAGACCGACACAGAACGTCCCGCTGCCACGGCCGATGCGACGGCCGACCGGCCGGCCCCGAACGGCACCGGCGCCGCCTAGCCGGGTTCGGCCCTCTGACAAAATAAAAAGGCTCAATCGTCCCCGCTCCAACCGCGGTAATATCCGCGAAGCGGGGGGTGCACGACGGGCGGTGGCCGATGACCCTCGGACAAGCTTTCAATGGGGGAAACAACGCGCTGAACGCGTGGCGGCTGGTGCTGGCTGCCGAGGTGATGCTGTGGCACTGCTGGCCCATCACCGGCCGGATGCCACCCGCGGCGACGCTGCAACTTCTGTTCTCGATAGGGGTGGACGGCTTCTTCGCGATCTCGGGGTTCCTCATCACCAGGAGTTGGCTCGACGACCCGCACGTGCGTGACTACCTGACCGCCCGCGCCCTTCGTATCCTGCCCGGCTACTACGCGTGCCTCATCGTGACGGCGTTCGCCTTCGCCCCCCTCAGCGTGGCGATCCAGGGCGGCTCGGTCGGCAAGCTCGTGTGCTCCGGCGGGCCGCTCGAATACGTCCTGAAAAACAGCGCGGTGGCGTACGTCCATCTCGATGTCGGCGGAACACCAAGCGGGATACCACATTCCGGGCTCTGGAACGGTTCGCTGTGGTCGCTGGTCTGGGAAGTGATCTGCTATCTCGCCGTCGCCGGTGTCGGTATGGCGGGCCTGGCCCATCACCGCTGGGTCTCTCCGGCAATACTCGTCGTGGCTACGGGTCTGGCAACGGCGATGCCGCCGATGACGTTCCCCGGGGTATGGACCATTCCCCAGATCGCCGTGCGTTCGGCGATCATGTTCGCGGCCGGAGCCGTCCTCTATCAATGGAGAGAGGTGATCCCCGCTCGGTGGCCGCTCGTCGGGGTCAGCGTCGTCATCGTGCTGGCGTCCAGCATGCTGCCCGATTACCGCACGGTCGCCGCCCTTCCGTTGGCCTACGCGATCATCGTGTCCGGCGCCTTGCTGAAGAGCAGCCGCTTGAGGCTACGCACGGATCTGTCCTACGGCGTCTACATCTACGCGTTCCCGACCCAGCAACTCTTGGCCGTGTGCGGCCTTGCGCGTCTTCAACCCGTTGCGTTCTTTCTCGTCGCCGCCGCGGCGACGCTACCCGTGGCCGCGGCGAGCTGGTTCCTCATCGAAAAGCCCTCGATGGCTCTCAAGCGCCGGCTCAAACGGAAGTGGTCTGACGCCACGAAAGCCGAAGGCGGCCACCCCGCCACCACAGCAGCAGGATGA

Protein sequences of DBSCAN-SWA_3

>NZ_CP015964|4490015:4500054|4496468_4497605_+|WP_036453846.1|DBSCAN-SWA
MKLGQVFDPRKNALNALRLALAAEVMLFHSWPITGHMPPKSTLQLFFSVGVDGFFAISGFLITRSWISDPRLRDYLAARALRILPGFYICLIATAFVFAPLSVAIQGGSAAKLLGSTAPLEYVVKNAAVAYLQVDVGGTPRFVPGGPTWNGSLWSLIWELLCYLAVAVIGVAGLANRRWISAVILALATGLALILPPLTFPGVWTIPQLAVRAAIMFSAGAVMYQWRDLIPARWSLVAISLVIVAGAGFLPDYRVVGALPLAYAVIVSGALLKNDRLRLRTDLSYGLYIYAFPTQQLLAVCGLATRLHPAVFFLVAVAASLPLAAASWFLVEKPSMSLKRRLKRRWSAPVTSSSEEPPPASKADVIGDRPGPGLSETA
>NZ_CP015964|4490015:4500054|4492450_4493317_+|WP_036453842.1|DBSCAN-SWA
MTEGVSLKPDLGQFGVWLPTRSIQPELAAGIESLGYGAAWIGGSPDAELSWVEPALARTTSLQLATGIVNIWSAPAAAVAESFRRIETHHPGRFLLGVGVGHPEHTGEYVKPYDALVSYLDELDAALVPTSRRVVAALGPRVLRLAARRSAGAHPYLTTPEHTARARELLGGAVYFAPEHKVVLSTDAEQAREIGRQTVEHYLGLSNYVNNWLRLGFTEADVRTPGSDRLIDAVVAHGTPEAIAGRLREHLDAGADHVAIQVLGGYSKETLLPALTELAGALGLTAAN
>NZ_CP015964|4490015:4500054|4493344_4494340_+|WP_008260499.1|DBSCAN-SWA
MRLLVTGGAGFIGANFVHSTVREHPEDSVTVLDALTYAGRRESLAGVEDAIELVVGDITDAELVSRLVAESDAVVHFAAESHVDNALEGPEPFLHTNVVGTFTILEAVRRYGVRLHHISTDEVYGDLELDDPQRFTEATPYNPSSPYSATKAAADMLVRAWVRSYGVRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRILEKGEIGRTYLISSEGERDNLTVLRTLLQMMGREPDDFDHVTDRAGHDLRYAIDPSTLYDELCWAPKHTDFEEGLRETIDWYRANESWWRPLKDASEARYEERGQ
>NZ_CP015964|4490015:4500054|4491581_4492430_+|WP_036453840.1|DBSCAN-SWA
MTDAASKPDLGRFGSFGRGVTPQQAKDIEALGYGAVWVGGSPPAELSWVEPLLEATTTLQVGTGIVNIWTAAAGPVAESFHRIDKAYPGRFLLGIGVGHPEAHTEYRKPYDALVDYLKQLDDYGVPANRRVVAALGPRVLRLSAERSAGAHPYLTTPEHTARAREIIGPSAFLAPEHKAILTTDAEKARAVGRKALDVYFNLANYRNNWKRLGFGEDEVTRPGSDRLVDAVVAYGTVDQIAARLTEHLEAGADHVPVQVLTKDENLISALAELAGPLGLNPS
>NZ_CP015964|4490015:4500054|4497700_4498867_+|WP_036453848.1|DBSCAN-SWA
MKLGQAFDTRDNALNAWRLVLAISVILGHSFTVTGRPSPTGIVGHLLGAGGVDGFFAVSGFLITASWLRQPHLREYLTARALRILPGYYVCLIVTAFIIAPVGVAIQGGAALKLLFSAAPFQYVLMNIAVATLKVDVGGTPTGIPYPGTWNSSLWTLMFEIACYFVVAGLGVAGLANRRWVSPTILVTAVICAALVPPFKLQAEFTLQFAAASARFAIMFAAGALLYQWRDVIPARWWLVGVSVAVVLLGGTVLPDYRRLGGIPLAYAIIVSGALIRNKRLRLRTDLSYGVYIYAFPTQQLLVICGVGVLNPNVFSIVATLCTLPLAALSWFVIEKPAMSLKRRLKKRWSGPAAAETDPRVAETDTERPAATADATADRPAPNGTGAA
>NZ_CP015964|4490015:4500054|4495199_4496324_+|WP_036453844.1|DBSCAN-SWA
MKLGQVFDPRRNALNAWRLALAGEVIFWHTYPIRGHLPSVRAVLQLLLCVGVDGFFAISGFLITASWISNPRLREYLAARALRILPGFYVCMIVTAFVFAPLSVAIQGGSAARLLFSFAPFEYVLKNIAVMWLKFDVGGTPHGIPNAGIWNASLWSLFWEVMCYVVVAVIGVAGLANRRWVSLTILVVAAIGASLMPPVRFPDVFHHPEGNIATTLIFMACRAAIMFAAGAFLYQWRDVIPARWSLVAVSVVIVLAAGQLPDYRVVAAIPLAYAVVVSGSLLQSKRLRLRTDLSYGMYIYAFPIQQLLLVLGLISLTPIVFCLTVAVATLPLAAASWFLIEKPARSLKSRFKGKPLASRSQAPVALPPEVSGAA
>NZ_CP015964|4490015:4500054|4490015_4491542_+|WP_036453838.1|DBSCAN-SWA
MTGAESIKVPCEPDELRSLFLFEALTDEQLAVLCAAGHIETYEPGPICVEGEPATCFYVLIEGELMMSKLSGGQDIETNRTSQRGVYCGAWRAFTGGKQKSYDASVHVTRPSRFFVMDAPVFAQFMRDQFPMAVHLLDGIAVGTDRTRRIIDNREKLLALGRLSAGLTHQLNNPAAAISRAASDLRERVASMRHKLAMLADGTVSPEALSALVRLQERVAEQVAKSASQHLSALETADREDAVGDWLEAHGIDGGWDIAPTFVEGGIDTDWLERISAVSEELASTSAEQAIRWINYTIESELLMNQILEASKRISALVADAKQYSQLDRAPFQVTNVHELLRSTLVMFADRLTKDGGKNSHAIAVVKDFDQSLPEIPCYPGDLNQVWTNIIDNAIAAMRDTGGTLTIRTCREGEHMARVEICDTGPGIPEDVREHIFEPFFTTKPFGEGTGLGLDLAFNIVVKKHRGDLRVESAPGDTRFIVLLPLQPPAADVAPDLDGPEENVTTPE
>NZ_CP015964|4490015:4500054|4494341_4494959_+|WP_036455274.1|DBSCAN-SWA
MEVRELKVPGAWEITPAVHGDSRGHFFEWLTDKGFRSFAGHRLDVRQANCSVSSAGVLRGLHFAQVPPSQAKYVTCVRGAVFDVVVDIRVGSPTFGQWDSVLLDDTEHRTIYLSEGLGHGFLALQDNSTVMYLCSAEYNPQREHTICATDPALGIDWPLVDGAPPTLSDRDATAPSLDDVRASGLLPTWEETNAFVEGLRAKPAN
>NZ_CP015964|4490015:4500054|4498965_4500054_+|WP_036453849.1|DBSCAN-SWA
MTLGQAFNGGNNALNAWRLVLAAEVMLWHCWPITGRMPPAATLQLLFSIGVDGFFAISGFLITRSWLDDPHVRDYLTARALRILPGYYACLIVTAFAFAPLSVAIQGGSVGKLVCSGGPLEYVLKNSAVAYVHLDVGGTPSGIPHSGLWNGSLWSLVWEVICYLAVAGVGMAGLAHHRWVSPAILVVATGLATAMPPMTFPGVWTIPQIAVRSAIMFAAGAVLYQWREVIPARWPLVGVSVVIVLASSMLPDYRTVAALPLAYAIIVSGALLKSSRLRLRTDLSYGVYIYAFPTQQLLAVCGLARLQPVAFFLVAAAATLPVAAASWFLIEKPSMALKRRLKRKWSDATKAEGGHPATTAAG

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_036453838.1|4490015_4491542_+	cyclic nucleotide-binding domain-containing protein	W8CYF6	Bacillus_phage	1.3e-12	37.4
WP_036453840.1|4491581_4492430_+	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA
WP_036453842.1|4492450_4493317_+	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA
WP_008260499.1|4493344_4494340_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	5.8e-75	46.5
WP_036455274.1|4494341_4494959_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.6e-27	38.8
WP_036453844.1|4495199_4496324_+	acyltransferase	A9YX16	Burkholderia_phage	1.4e-16	28.6
WP_036453846.1|4496468_4497605_+	acyltransferase	A9YX16	Burkholderia_phage	2.3e-19	30.5
WP_036453848.1|4497700_4498867_+	acyltransferase	A9YX16	Burkholderia_phage	1.0e-17	25.4
WP_036453849.1|4498965_4500054_+	acyltransferase	A9YX16	Burkholderia_phage	6.1e-17	29.7