CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP016306	Sphingomonas sp. KC8 chromosome, complete genome	2 crisprs	csa3,DinG,DEDDh	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016306_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016306_1

643866-643960

Orphan

Consensus_repeat	Method
CAGGTGACGGGCACGCGCAAGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016306_1

>merge|NZ_CP016306|1|643866-643960|CRISPRCasFinder
CAGGTGACGGGCACGCGCAAGGACGATGCGGATGCCGATGAGGCTGGCCAGACCGACACTTCGGTCAACCAGCAGGTGACGGGCACGCGCAACGA

>NZ_CP016306|1|1|643866-643960|CRISPRCasFinder
CAGGTGACGGGCACGCGCAAGGA	CGATGCGGATGCCGATGAGGCTGGCCAGACCGACACTTCGGTCAACCAG
CAGGTGACGGGCACGCGCAACGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016306.1\|WP_010123576.1\|624629_626528_-\|sulfotransferase-family-protein	unknown	unknown	gnl\|CDD\|379204
NZ_CP016306.1\|WP_010123578.1\|622070_624512_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|224544
NZ_CP016306.1\|WP_010125083.1\|662135_662804_+\|phosphoglycolate-phosphatase	unknown	unknown	gnl\|CDD\|237310
NZ_CP016306.1\|WP_010123563.1\|635898_637725_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP016306.1\|WP_029624471.1\|650480_652487_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377163
NZ_CP016306.1\|WP_010125085.1\|658847_660671_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP016306.1\|WP_010123570.1\|629019_629466_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP016306.1\|WP_010123565.1\|634904_635618_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016306.1\|WP_010125084.1\|660708_662076_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|184642
NZ_CP016306.1\|WP_037495288.1\|629798_632816_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_CP016306.1\|WP_029624472.1\|647461_648898_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143465
NZ_CP016306.1\|WP_010123573.1\|627898_628972_-\|4-hydroxyphenylpyruvate-dioxygenase	unknown	unknown	gnl\|CDD\|225726
NZ_CP016306.1\|WP_010125094.1\|644103_645636_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP016306.1\|WP_010125093.1\|645779_647429_+\|acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236239
NZ_CP016306.1\|WP_086495669.1\|652733_654482_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016306.1\|WP_010123575.1\|626601_627885_-\|homogentisate-1,2-dioxygenase	unknown	unknown	gnl\|CDD\|235421
NZ_CP016306.1\|WP_037495872.1\|649056_650481_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372604
NZ_CP016306.1\|WP_050805348.1\|632902_634870_+\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP016306.1\|WP_010123580.1\|620734_622048_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182613
NZ_CP016306.1\|WP_010125086.1\|654538_658687_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293789

Protein	Function_ID	Function_description	E-value
NZ_CP016306.1\|WP_010123576.1\|624629_626528_-\|sulfotransferase-family-protein	gnl\|CDD\|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	9.85441e-46
NZ_CP016306.1\|WP_010123578.1\|622070_624512_-\|TonB-dependent-receptor	gnl\|CDD\|224544	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism].	1.71328e-39
NZ_CP016306.1\|WP_010125083.1\|662135_662804_+\|phosphoglycolate-phosphatase	gnl\|CDD\|237310	PRK13222, PRK13222, N-acetylmuramic acid 6-phosphate phosphatase MupP.	3.88098e-80
NZ_CP016306.1\|WP_010123563.1\|635898_637725_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	7.66595e-48
NZ_CP016306.1\|WP_029624471.1\|650480_652487_+\|hypothetical-protein	gnl\|CDD\|377163	pfam03928, Haem_degrading, Haem-degrading. Haem_bdg is a bacterial protein that is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein.	9.60146e-07
NZ_CP016306.1\|WP_010123570.1\|629019_629466_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.52672e-19
NZ_CP016306.1\|WP_010125085.1\|658847_660671_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP016306.1\|WP_010125084.1\|660708_662076_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|184642	PRK14353, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU.	0
NZ_CP016306.1\|WP_037495288.1\|629798_632816_+\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	3.77078e-45
NZ_CP016306.1\|WP_029624472.1\|647461_648898_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143465	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.	0
NZ_CP016306.1\|WP_010123573.1\|627898_628972_-\|4-hydroxyphenylpyruvate-dioxygenase	gnl\|CDD\|225726	COG3185, COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only].	2.83684e-168
NZ_CP016306.1\|WP_010125094.1\|644103_645636_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	1.2516e-158
NZ_CP016306.1\|WP_010125093.1\|645779_647429_+\|acetolactate-synthase-large-subunit	gnl\|CDD\|236239	PRK08322, PRK08322, acetolactate synthase large subunit.	0
NZ_CP016306.1\|WP_010123575.1\|626601_627885_-\|homogentisate-1,2-dioxygenase	gnl\|CDD\|235421	PRK05341, PRK05341, homogentisate 1,2-dioxygenase; Provisional.	0
NZ_CP016306.1\|WP_037495872.1\|649056_650481_+\|hypothetical-protein	gnl\|CDD\|372604	pfam13435, Cytochrome_C554, Cytochrome c554 and c-prime. This family is a tetra-haem cytochrome involved in the oxidation of ammonia. It is found in both phototrophic and denitrifying bacteria.	2.96501e-07
NZ_CP016306.1\|WP_050805348.1\|632902_634870_+\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	6.91997e-52
NZ_CP016306.1\|WP_010123580.1\|620734_622048_-\|amino-acid-permease	gnl\|CDD\|182613	PRK10644, PRK10644, arginine/agmatine antiporter.	4.18422e-74
NZ_CP016306.1\|WP_010125086.1\|654538_658687_+\|hypothetical-protein	gnl\|CDD\|293789	sd00042, LVIVD, LVIVD repeat. LVIVD repeats are mainly found in bacterial and archaeal cell surface proteins, many of them hypothetical. Structurally, LVIVD repeats have been predicted to form a beta-propeller, with each repeat forming one four-stranded anti-parallel beta-sheet blade.	7.60256e-25

>NZ_CP016306.1|WP_010123563.1|635898_637725_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MKSLARSTVSLLALSMFATGTPLAAQVAVGGAPTREEIERKPLAPAPQTAPRLTVQGGIERAPCPLADERFKDITVTLSDVQFDNLRAVEPATLRPAFEAYIGRTVPIATVCEIRDAAATILRRAGYLAAVQVPAQRIENGVVHFDVLMAKLVAIQVRGDAGRAEQLIAGYLNEIKGREVFNEKEAERYLLLARDLPGFDVRLLLRPAGTAPGEVIGEVSVQKTPFVIDASVQNFGSHEVGRWGGQVRGEVYDLLGLGDRATIGFFATPEFDEQRVLQLGYDMRIGSEGMTLGGRFTYAWSEPDLGDPGNGRVKSETLLAGVELAYPVVRRQTMNLRAAIGFDYIDQDVRFGSSSGFQPLTRDRLRVLYGRADFDMADRESLMSVAGFNVAEPRWRLAGSFEYRHGIDVFGATDGCGPSPYLACFASGTIAPSKVEADPTASLVRFSGIGEFRPRPTIAFTLAPRAQYTRSALLSYEEFSGGNYTIGRGYDPGARTGDSGVGFQAEMRVGRMSPNSRDDLAFQPFVFFDKAWLWNRRSPVTPLVADPQELSSAGGGVRLVYGDHARFDVTLAKPLQKIPMSTSTGEVMRRPDTRLLVSLTTRLFPWNR
>NZ_CP016306.1|WP_010123565.1|634904_635618_+|hypothetical-protein
MIATVSVGASAATLVVRSSGPSAKSYPAGKQLADSSKIALKAGDQVVILDSRGTRTLKGPGIFSPTLPSNQASDSRETFAQVSSRRARPGATRGVQPAAPPAASGRSPNIWFVDAERSATVCVADPSAVTLWRPEGGPMTTATLAQVGSDRTETVQWLQGQSKRPWPASLPVTDGAQYRVTWEGQAAPTELRFALLGPTTSGLEDMASKLITRGCTAQLDLLIETVAIPDGASKPGG
>NZ_CP016306.1|WP_050805348.1|632902_634870_+|adenylate/guanylate-cyclase-domain-containing-protein
MRRSLRRIGPWRLAVTLLFLALALFIARYSWERVPVAADIERMLYDLRATATAPKIEQDSRIVMVVFNDQTLIETGRRSPLDRVTLAKALAKLDALGAKAIGIDILIDQATPEDAQLVDAFKALRTPTYLAFVSAETNPDFVEFGQEEFLRAFQQSIAGGAVKPASVLLEQDRTDNVIRSWPHQPANLPPLLVNAMTAVHPEFRQYTGAIRFRAPVDAERPVFAKLPIQLFTGDFPADALRDQIAGRYVLIGGDIFDVDQFETPSTRTDGGTTIGLEVHAHMLAQLLDGAMFKAVPGWLLWTAAILVIIAGALTSMLDVRPWLLGLILIAQIALILTIPYLAQAQNVDTQFLPVFGWIAGWFLAFAAVGTAARAVGSEQRRFAQSALGKYLPRDVANLIMRDPDRLALHGEKREIYALFTDLEGFTKLSHAIAPEMVAFLLNRYLDMLSETVLRHGGTIDKFVGDAVVAFWGAPIARPDDPDRATAAALAMYEAGEAFRRSAPQGVPPIGCTRVGLHFGEAIVGNFGGDGRIQYTALGDSMNTAARLESANKQLKTTILVSETVVTRSTFAHFRPMGRVAVRGRSTPFAVYEPVPHLPIEDVTRLTALVAQFDEGDFQALEELEAYAAEHPEDAAIANLVYRLRTVGPGGSFVLD
>NZ_CP016306.1|WP_037495288.1|629798_632816_+|CHAT-domain-containing-protein
MAANDDRPSLQDSFRLGGQQGVLCQVQSSSLDPAITGMFDRSYAIVCRDAATPVGRVYALRAGANDPSARLQAIRAGITTCTAPTGRASLPDIGDVTVTDCDLKGNDVDYRVYSVQRGKTLYVAEGLAGYDSALTLALRTIATDRMIEGTVDVATTAVSDPAAFARVQAGSLDIDTALAEGYRRNNSGSYAEAAEFFDTLLQRAEGGKVSQAALGEYVVNRALQRSNLGEFSEAEALFQQASLIPTADPVQLRLRRNFTVMHLINQRKLDDATAELDRKLAAIGIVGGPAAAGVIDADVAAGLNSSAPLIRQLGGTETTSLTEEEKAAILDAQALQLRGTVLRLEGKAVPARAALTSTLDQLMAIRGGRVTSITRLRAQTMAELSAIAESSGNQGEAEALLRNGLALLEGEYPRSVAVAAAKARLAAYLSRRGQDQAALNLYRDVIRSVTDIGTTTAGFENLIAPYFALLTRLMPRQPSLVQDFFLASETLVRPGVADTQAVLARELSGGSDEAARLFRQSVTLTRDIERSRIELARLDALPSPNADDQARMTALRQSLRGLETDQVATQSKLGQYPRYRAVSTQAMALGDLQKALRPGEGYLKLVLVSNAIYGIWATPDTATAYRANISAADLDRKVDALRDTISVEENGERLTYPFNLRLARELYVDLLAPIGDRLNGVGHLIFEPAGGMLRLPPALLVTDQAGVDAYYARLKKPKADDFDFRGVAWLARKADISTAVSARAFRDVRGAAPSAAKHEFLGLGQNAPVSPFVQLTSSRGVSSTGAIDCDWPLAAWNSPIQATELKTAQTIIGGGNSAVITGADFTDTAVMTKPDLNQYRILHFATHGLVTAPRPECPARPALLTSFGGAQSDGLLTFKEIYDLRLDADLVILSACDTAGKATVAATREAGITSGGGNALDGLVRAFIGAGGRSVLASHWPAPDDFKATERLIASLYEAKPGTSVAGALRTGQLMLMDDAPTSHPYYWSDFVIIGDGAQPVLKHR
>NZ_CP016306.1|WP_010123570.1|629019_629466_-|MarR-family-transcriptional-regulator
MPPQSLSLDSFIPYRLSVAANAASAVIATLYQRRFGISIPEWRVIAILGEGAPLAPRAIVERARLDKVTVSRAAKTLESRGLLARSSDHDDQRSHRLALTGPGRALYEAVAPEALALEARLLAGFADWERGALEGLLRKVEDAAASIR
>NZ_CP016306.1|WP_010123573.1|627898_628972_-|4-hydroxyphenylpyruvate-dioxygenase
MAAPHDNPLGLDGFEFVEFTGPDPQALATLFEAMGFTHLADHRSKNVRRYAQGDINFILNMNASGQVADFRAAHGPSANAMAFRVKDAAQAFDEAVRRGATPVTGPVGPMELNIPAIEGIGGSNLYLVDRYGAQEIYDVDFKPVPGAQRDDRSVGLHTLDHLTHNVNRGRMAYWADFYERIFNFREIRYFDIEGKATGLFSKAMTAPDDKIRIPLNESQDEHSQIEEFLKEYKGEGIQHLALATDDIFATVDRLRANGIRFQDSPDTYFDMIDQRLPGHGHDVEEMRKRRILIDGAPETGGGILLQIFTENMVGPIFFEIIQRKGNDGFGEGNFKALFESLELDQIRRGVIPGQAEG
>NZ_CP016306.1|WP_010123575.1|626601_627885_-|homogentisate-1,2-dioxygenase
MPDYLTGFGNHFATEAVPGALPVGRNSPQRPAFGLYAEQVSGTAFTAPRGDNRRSWLYRLRPSGDHGAYRPYAGAPGFAVDGWGAPLAPNRFRWSPLADTADAADLIDGMTTMATSCDPAALGGVTVHIYRAARDMSVRAFCNADAEMLFVPQQGRLRLFTELGVLDVAPGEIALIPRGIRFRAELPDGAARGYIGENHGQPFRLPELGPIGSNGLAAPRDFLTPVAAFEDRDEAFDLIQKFRGCPWVTELDHSPIDVVAWHGNYAPWKYDLARFNTIGTVSFDHPDPSIFTVVTAPSDTPGTANCDFVIFPPRWMVGEDTFRPPWFHRNMMSECMGLIHGSYDAKADGFAPGALSIHNLMTSHGPDVATWCAASKADLAPEKIDGTMAFMFESRWPFVPTGRALMLPEMQAEYDACWRGFPKATLP
>NZ_CP016306.1|WP_010123576.1|624629_626528_-|sulfotransferase-family-protein
MANGAAQVTTNLAAALSHGQDLLRINPALAVEQADVILTVANDHPQALVLRGRALAALGRRDDAIAALRRAVARDPRSAEAWRTLGDQLILTGDGPGADAAYARHIRASVNDPRLREAAEALCDNNLAVAERILKPHLKQFPTDVAAIRMLAELAGRIGRYGDAESLLRRAVELAPSFAAARFNLATVLHRQNKAVAALVELDHLLTGEPDNPAYRNLKGAALGRIGDFDDAIAQFEAVLARRPDEPKVWMSYGHTLKTVGRQADSVAAYRRTIALAPALGEAWWSLANLKTVHLDDADIAAMEGALLGEGITPEDRFHLHFAVGKAHEDAGSTDIAFVHYAKGNRQRRDLIDYDADQTTAYVDRSIALMTPEFFAKRAGQGCPAPDPIFIVGMPRAGSTLIEQILSSHPLVEGTQELPDIVTIARRLGDGAADEDKRYPASLADLAPASLMALGEEYLERTRIHRKTDRPHFIDKMPNNWMHVALIRLILPKARIIDARRHPLGCCFSNFKQHFARGQAFSYSLDEVGRYYRDYARMMAGVEAALPGYVHRVDYEAMVENTETEVRRLLDFLALPFDPACLRFHETERAVRTASSEQVRQPIFRSGVEQWQMFDGHLAPLRAVLGELLDQY
>NZ_CP016306.1|WP_010123578.1|622070_624512_-|TonB-dependent-receptor
MVHGHDQRAELRLTRVSLGFGLLASTMFVTPALAQQGAAGGGIQEIVVTAQKRVENLQDVPIAITAFGTEKLDELQVTDFDDYARYLPSLSYQTSGPGGSNVYFRGVASGEVANHSASLPSVGTYLDEQPITTIQGALDIHIYDIARVEALAGPQGTLYGASSQAGTIRIITNKPELGKFYGGADLELNTVAHGGQGYIGEAFINAPISDNMAVRVVGWYKKDAGFIDNIPGTLNFPSSGIAFDNAPFVKKDYNDVETYGGRAALKIDLDDNWTLTPQVMGQKQVSHGTFAQESGLGELQVQQFNPERFDDRWYQASMTIEGKIGSFDLTYAGSYLKRTVRGQSDYADYAYFYDKLFGSGEFIYDNMGNPINPNQYIVSTDRFTKQSHELRLASPGENRVRFIGGLFYQVQKHNIEQNYVIDGLADVLTVTGTDSDIWYTKQIRKDRDYAIFGELAADVTDKLTVTLGARVFRYNNTLVGFFGYSAGYSSRTGEAACFGPPIVGGSPCTNLDKGTKDTDFTHRINLTYKFNDDVLLYGTVSRGFRPGGINRRGTLPPYQPDFIDNYEIGLKSTLFDRRVRFNMAVYQLNWTGIQLSFLGANGLTEIRNAGDARIRGAEMDLTVKPFGGLTLSAGGSYNDAKITKDFCKFANLEFDCTIPGPDITGPDGDPDGIPDDNEQLAPAGTRLPITAKFKGNIVARYDFALGGGRDAHLQAGVVYEGRRTSDLRLVERAITGNLPAYTTVDISAGVSSDRWSLQLFARNLFDKNGAVGKTIQCGETICGDPDGVSAIGGKIYTYPTQPRTIGLKLGTKF
>NZ_CP016306.1|WP_010123580.1|620734_622048_-|amino-acid-permease
MTKGMAVRQPRALGFWMCLALVVGNMIGSGVFMLPASLAPFGWNAIFGWLITIGGGLCLAFVFARLAGAVPQAGGPYAYTRAAFGPLIGFVVAWSYWITLWVGNAAIAVAAISYLSVFMPAIRAVPGLPALLACACIWTLTAVNCRGVAAAGRLQVVTTVLKLLPLLAVLVLAAVMIGQGRTPAPFRVADIHPAAITATATLTLWALLGLESATIPADKVEGAGNTIARATLWGMAITGVIYLLVCSAVTLLMPATDAARSSAPIADFIALHWGEDAGMLVALFAAISAFGALNGWILLQGEMPWAMARDGVFPRWLGVSSRRGTPVRAHIVSSILVTAVMLTNYSRSMADLFTFIALLATSTSLVAYLGCSLAAFRLLRRDRIVLVVASATALYSIWTLYGAGPEATGWGLVLLAAGAPVYWLVRRSGTAQQTADQ
>NZ_CP016306.1|WP_010125094.1|644103_645636_+|cysteine--tRNA-ligase
MPHTLPAGQPLVLFNSVTRATETFTPIDPAMAKLYSCGPTVYNFAHLGNLRAYVFTDTLRRVINWKGWNATHVINITDVGHLTSDADEGDDKMELAAKAAARTIWEVAAFYTGAFKADIARLGILAPTIWSVATDHIQDMIAFGREIDDAGATYELPSGLYFDVTKVPDYGRLAGARPDEMIGRIETVEGKRNAADFAIWRKSPDDSTRQMEWASPWGVGAPGWHLECSVMSMKYLGEQFDIHTGGIDHREIHHCNEIAQNQAFTGTAETGANIWMHNNFLVDRGGKMSKSKGGFATLQSLVDRGVHPLAYRLLCLSAHYRSELEFSPENLGAALTRLKRLLIAVAQLRDKAGVLPWAQVVADAGATKGASLAYQRSVLEHGLPADAVALIARFDEAVSADLMIPQALPLIEEAVAKKGWSPEIRLRLVATFDLVLGLGLLTLARADLRIRPADATITETEIEARLADRQAARAAKDFAQSDAIRDALAAQGVDLMDGDPLRWEWRVALA
>NZ_CP016306.1|WP_010125093.1|645779_647429_+|acetolactate-synthase-large-subunit
MATKASDLFVQCLEQEGVEYIFGVPGEENLDMLDSLSRSKQIKLILTRHEQGAGFMAATYGRHTGKTGVCMATLGPGATNLVTAAAYAQLGGMPILMVTGQKPIKKSKQGRFQILDVVSMMGPITKYTHQLASADNIPSRIREAIRVAEEEKPGATHLEFPEDVADEHTESRPLKPSLARRPSAEPKAVRAAVEKIERAKAPILVIGAGANRKLTGRMLLQFIEKTGIPFLTTQLGKGVIDENHPLFLGCAALSSGDFVHRAVEAADLIVNVGHDVIEKPPFFMQNGGTEVIHISTRSAEVDPVYFPQIEVIGDIANAFWQMKNDVVPSGSWDFDFMLRARKAEQAHTASIEGDTRFPIFPPYLVREIRKAMPANGIICLDNGVYKIWFARNYCARQPNTVLLDNALATMGAGLPSAMASAMVYPDRKVMAICGDGGFMMNSQEMETAVRLGLNITVLILNDGSYGMIRWKQANMGFEDWGLTYGNPDFVKYAESYGAKGHRVESAEHLPQLLAACLDTPGVHLIDCPVDYSENDQILNKDIKDLSKKV
>NZ_CP016306.1|WP_029624472.1|647461_648898_+|aldehyde-dehydrogenase-family-protein
MKLKDSYPLYLANEARMPNTDLAVTDKFTGEIATRVAMADATTIAAGIAAAVEAAEPMAQMASYERQAVLQHCVDRFKERADELAYALCVEAGKPIRDSRGEVGRLIDTFRIAAEESVRMTGEVQPLDISPRAKGYQGIWKRVPIGPCSFISPFNFPLNLAAHKVAPAIAVGCPFVMKPASRTPLGAIIMGEVLAETNLPSGAFSILPASRDGADLFTTDDRLKLLSFTGSPDVGWDLKARAGKKKVVLELGGNAAVIIDADADLDDAVDRTVFGAFYQSGQSCIGVQRILVHDKVYDAFRDKLVAKTRTLIAGDPHGEQTFIGPMIDVKEAARLSDWISEATAKGATLLCGGKRDGAMLEATLLEHVGRDTKLNIEEAFGPVAFLIRFSEWNESVAIVNDSKFGLQAGIFTRDIFKVLDAWDRLDVGGVVINDVPSYRVDNMPYGGVKDSGLGREGIRFAMEDMTEIRNLVIRRRAP
>NZ_CP016306.1|WP_037495872.1|649056_650481_+|hypothetical-protein
MSGGTLASKSAWLISALCCAAIAFLALGLVVSGSGGLASGSPALAATASRSSGGIHLGVATCSGSTCHGRSENDGAVVRQDELMRWQEESSPSGAHSRAFRVLAEPRSQAIAQRLGLGSATTAPMCLGCHTDPVAAGQTGPRFQVSDGVGCESCHGGAQNWIASHYAVGATHQGNVAAGLYPLTNPRARADKCLDCHFGSDRPGQFVNHRIMAAGHPRVSFELDLFSTLQQHHDEDADYLRRKGRISNVRMWAVGQAAALDRALSLYSNTRIGQDGIFPEFYFFDCHTCHRRISDDAGFRATAVANPGRPIPSGMPAFNDENMIMLGAAARATAPALAGRLDADSKAFHAALAADRASAIRAAARLRTTAEALATSFASTEFTRAQTFAIVDAVTSNAILARLTDYEGSVQAVMATDTLLNALVNSGQVGAGSAASIRGDINAAYGAVRDPNSFRPLEFRAALGRAASAIRALR
>NZ_CP016306.1|WP_029624471.1|650480_652487_+|hypothetical-protein
MLRTRVTTTLCGASLLLASCGGGGSDSSTPTPPTPTPTSLYSVPAQEALSTSDVEKILAQAIEEAAARGKPATIAIVDRVGNVLAVYTMAGAPTDLLIKSPPGGRTVAQTDIEGRLFPNAIAAGAIAKAVTGAYLSSGGNAFSTRTASDIVQEHFPVSPGTIGLESGPLFGVQFSQLPCSDFSSRFTGTASGNAFIGPKRSPLGLAADPGGIPLYKSGVLVGGIGVMSDSLYSYDPDYQDIDSDPDELIALAASAGFAVPGPLISGRYTRISVDGTLLKFSDALPQDLRFSGTPRTFAALNVPAIGSLIAVTGYSAATIVAGRAYGSEASGIRKATTAEFNNADAFVFSDGSGGTRYPIRAATDAGDVAQPLTATEVRAVLEEAFLIMGKARAQIRKPDDSRAQVSLSVVDTRGVILGIVRSPDAPIFGSDVAVQKARTAAFFSNAQAGSDLLAEPGPISPAVAPNVTDARGYVSAARTFLNDPSALTGKVAVSDRWFGLLTRPYFPDGEVGKPNGPFSQPIGNFSPFSTGLQTALIFTNLAQHVQFVTGASTTDTRQRCTFLPDHGPSQNRLQNGIQIFPGGVPIYRGNVLIGAIGISGDGIDQDDMISFLGLHNAGLRIGGIGHPLPAARASQIAFPATRGGFLPYVQCPFAPFLGSQQQNVCEGK
>NZ_CP016306.1|WP_086495669.1|652733_654482_+|hypothetical-protein
MIDGRRRPGTQKGLPEPIVQQNDGAVRPPPPEAFPVDQFPIPDRWRLVQALCPDKNFPGVATTCRSIFDPYHQNFLKGDRPIDLKSKPGWLPIKGDDWFFIVNGVSDTVIEPRSFPQPINRQLNGQPNDNDVFGRSESIVASQTFIFGASLLKGSTAYKPPDVEYRAILAYNISYVDVGERRILSVKPSKKSHRRDAFLGVQELFLDYHFRNVSDRFDFDSVRVGIQPFNMDFRGFLFQDNQLGIRFFGNRDNNRVQYNVGAIWRLEKDTNSGLNSVVQTPRDDFIFYANLFRQDFPLPGITSQVSVTLNMNREGDGEIHLDDNGFPVRPALLGTLRPREYDVSYLGYAVDGRIGRLNITGSIYGALGEDRNSFFTDKPAKIRALFGAAELSYDYNWMRFRLSGLYASGDGNPYDNRETGFDAIFENPLFAGADTSYWIRQSVPFAGGGRAVGINGRNGILNSLRSSKEEGQSNFNNPGTMLLGVGGDFDLTPKFRVSTNINHLWFENTATLRALRIEGSIPKEIGWDYSISTIWRPSAVQNAVFRLSAAILDPGKGFSDLFSNNKGDNRYYSVLFNGILTF
>NZ_CP016306.1|WP_010125086.1|654538_658687_+|hypothetical-protein
MALTATVGIFGASQGIAAKGEKPRNIKYTFTPPAPQSQGWPEADEKSAGCVSCHTASDQKTMHTSPAVVLGCVDCHGGDATVMGDASLKHDAPAYVAARDKAHVLPRYPQAWHWPSSANPKRSYTLLNREAPEYVRFVNPSDYRVAREACGACHIEIIEAAERSLMSTGAMLWGGAAYNNGIVPYKNYMFGEAYTRNGLPAQIKSPGTPPGTVTEAEAKRGALATMYPLPTWHVIPPGDVFRVFERGGRNIGTQFPEIGLPNIGGTIQRLEEPGRPDLRQSNRGPGTGLRVAIPVLNVHKTRLNDPFMWFMGTNDQPGDYRNSGCAGCHVVYANDREPRHSLTWAKYGRDGQTATVDPTIANKMESSHDTTSDHGGSSHGDTTHQKTPKDSEAGNVAHPVGTGAKEKGHPIQHAFTRAIPTAQCMNCHMHQPNIFLNSYLGYTMWDYESDAPLMWPNPDNPLPPPPGKPADYYKKQKYPTAAEVHAVLDRNPEGASPRGLWADVDFLRNVYDNINLRAKDTQFADYHGHGWNFRAIFKRDREGNLLDAQGQIVKADDPEKFRLYRKNAAGQFIDEHGTPVDPADPDLDLKAKKLFADVGEQPGKAIHMMDIHAEKGLQCADCHFAQDSHGNGLIYGEVANAIEIGCKDCHGTPDAYPTLLTSGPAARPGGNNLSLLRNADGKRRFEWVDKAGERVLIQRSIVDPKLEWEVSLVKDAVTEGNAHFNLKAARAKLMAKSGAETGQYAFGPGVAVEDRAHKDPDMACFTCHLSWTTSCGGCHLPIEANWKTTSHKYDGIETRNFATYNPQVARDEMFQLGRHQTTKGNQIAPIRSTSALVLSSTNINRERIYIQQPPISAIGFSSQAFAPHFPHTVRKTETKTCTDCHLSAANDNNAIMTQTLLLGTNFVNFVGMNAWTGLERGFQAIRVTEWDEPQAVIGSYLHKYAYPDYWKAHQDHGRELIEWRRGKTFGKKLSGETHAVEEFANTHQGTSDGVRCLQLRGEYMFVAQGKGGFEAYDVASIANKGFSERIITAPVSPLGQDLKIRTPNATCMALPTMQAIAPTRNTESLRQLNQERPFHPIYHYAFVTDAVEGLVVINVDTLADGDPLNNHFKRDAVWNENGVLKGARHITIGGHYAYITADSGLVVVNIDDPLRPKLEAVLPVRDARASALQFRYLWVTSADGVLLFDVTNLAAPRAIPEATVPIANPQRLYLARTYAYVAAKQDGLVILDIKNPERPAIYQKVQFAGTAHPIDDAEDVIVGTTNASLFAYVADGRNGMKVLQLTSPASQPNFYGFSPAPKPELIAWTKTNSPALSLSKGLDRDRGVDESGGQIAVFGRLGSRPFTRPEMERLFLNRRGFPYKVIDTPSFDDWVPLRRAAR
>NZ_CP016306.1|WP_010125085.1|658847_660671_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIIGIIGREDVADRLLAGLRRLEYRGYDSSGIATIHDGVLDRRRAEGKLDNLAKKLAGNPLAGAIGIAHTRWATHGAPTEDNAHPHVVGDVTLVHNGIIENFKPLRDELLAEGRVFASQTDTEVVGHLVARELESGASPQDAVKAVLPRLHGAFALAFLFRKHPDLLIGARLGAPLVVGFGDGETYLGSDALALAPLTQKIAYLEEGDWAVLTRDAVTIHDCDNRIVDRPATLSGLTGALIDKGNHRHFMQKEIFEQPVVVAQTLGSYLRPLVGEVALPIPEFDFAEIRRVTIVACGTSFYAGMVAKYWFEQFARVPVDLDVASEFRYREPVLEDGGLALFISQSGETADTLAALRHARAGGQKIAVVVNVPTSSMAREADLLLPTHAGPEIGVASTKAFTCQLAVLAALAANFARAKGRMNRDEEQAIVRHLAEGPAAMNAALAHDAEIEALAPLIAKARDVLYLGRGPDYPMALEGALKLKEISYIHAEGYAAGEMKHGPIALIDEHVPVIVIAPSGPLFDKTVSNMQEVQARGGKVVLISDAAGIAAAGEGTVATIEMPQVHPLIAPLVYAVPVQLLAYHVAVAKGTDVDQPRNLAKSVTVE
>NZ_CP016306.1|WP_010125084.1|660708_662076_-|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MSDAINLPSRPFAAIVLAAGKGTRMKSDLHKVLHPIAGRPMLSHLLATVDTLGPATSLVVVGSGREQVEKHVQPHTQVVVQEPQLGTAHAVQQAQTALGGFEGDVLVLYGDVPLVTAETMARMLERLNALDAPAAVVLGFRPADPLAYGRIIAVEGVVTKMVEYKDATPQERAVTLCNSGLMAAKAKDLWALLARVGNDNAAGEYYLPDVVMLAGADGRHSAVIEVDAWEVAGVNSRAELASVEAEWQRRRRAQVMADGATLIAPETVWFSHDTKIGRDVVIEPQIFFGPGAIVGDRVTIRGFSHIEGATISDGAEIGPYARLRPGAEVGEGAKVGNFVEMKKARLGKGAKANHLSYLGDADIGEGANIGAGTITCNYDGYFKYPTRIGAGAFIGSNSALVAPVSIGTGAIVGAGSVVTRDVPADALGVARGVQDVKPGWAARFRAVMAAKKKSA
>NZ_CP016306.1|WP_010125083.1|662135_662804_+|phosphoglycolate-phosphatase
MNDFPFSVVAFDLDGTLADTAPDLTAALNHALGELGRPPIAAADVRHMVGHGARALLQKGLSATGDVNEALIERGYPIFLDHYHAHIADHSYPFEGLEAALDTLAARGVKLAVCTNKLESLGHELIGALGWRDRFVSLVGGDTLAVRKPDPAPLFEAITRAGGGRAAFVGDSITDTDTARAAGIPCVAVTFGFSDRPAEQLGADALIDHYDQLIPALERLAG

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Crispr_ID: NZ_CP016306_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016306_2

3037589-3037683

Orphan

Consensus_repeat	Method
CGTGACCGTGCCATCCTTGTTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016306_2

>merge|NZ_CP016306|2|3037589-3037683|CRISPRCasFinder
CGTGACCGTGCCATCCTTGTTGGTGTCGACCTTATCGAACCAGGCGAGGCGCGTTGCGGTGGCTTCGGCGAGCGTGACCTTGCCATCCTTGTTGG

>NZ_CP016306|2|2|3037589-3037683|CRISPRCasFinder
CGTGACCGTGCCATCCTTGTTGG	TGTCGACCTTATCGAACCAGGCGAGGCGCGTTGCGGTGGCTTCGGCGAG
CGTGACCTTGCCATCCTTGTTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016306.1\|WP_010124135.1\|3029967_3030657_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016306.1\|WP_010124153.1\|3046283_3046466_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016306.1\|WP_010124148.1\|3039618_3041223_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227621
NZ_CP016306.1\|WP_029624342.1\|3034843_3035698_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP016306.1\|WP_010124138.1\|3031249_3032473_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016306.1\|WP_010124155.1\|3047383_3047806_-\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|376622
NZ_CP016306.1\|WP_010124154.1\|3046969_3047263_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016306.1\|WP_157663928.1\|3046652_3046817_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016306.1\|WP_029624339.1\|3028796_3029579_+\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|187600
NZ_CP016306.1\|WP_010124144.1\|3037174_3037492_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|178203
NZ_CP016306.1\|WP_010124143.1\|3035984_3037160_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP016306.1\|WP_029624341.1\|3033733_3034747_-\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176195
NZ_CP016306.1\|WP_010124132.1\|3028511_3028712_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016306.1\|WP_138956617.1\|3030837_3031206_+\|STAS/SEC14-domain-containing-protein	unknown	unknown	gnl\|CDD\|378774
NZ_CP016306.1\|WP_010124151.1\|3043167_3044715_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016306.1\|WP_010124147.1\|3038336_3039557_+\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NZ_CP016306.1\|WP_010124152.1\|3044725_3046237_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223510
NZ_CP016306.1\|WP_138956618.1\|3041321_3043115_+\|AcrB/AcrD/AcrF-family-protein	unknown	unknown	gnl\|CDD\|224206
NZ_CP016306.1\|WP_010124157.1\|3047965_3049258_+\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783
NZ_CP016306.1\|WP_029624340.1\|3032469_3033741_-\|sulfotransferase	unknown	unknown	gnl\|CDD\|379204

Protein	Function_ID	Function_description	E-value
NZ_CP016306.1\|WP_010124157.1\|3047965_3049258_+\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0
NZ_CP016306.1\|WP_010124148.1\|3039618_3041223_-\|hypothetical-protein	gnl\|CDD\|227621	COG5305, COG5305, Predicted membrane protein [Function unknown].	1.34793e-08
NZ_CP016306.1\|WP_029624342.1\|3034843_3035698_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	5.57675e-28
NZ_CP016306.1\|WP_010124155.1\|3047383_3047806_-\|hemerythrin-domain-containing-protein	gnl\|CDD\|376622	pfam01814, Hemerythrin, Hemerythrin HHE cation binding domain. Iteration of the HHE family found it to be related to Hemerythrin. It also demonstrated that what has been described as a single domain in fact consists of two cation binding domains. Members of this family occur all across nature and are involved in a variety of processes. For instance, in Nereis diversicolor hemerythrin binds Cadmium so as to protect the organism from toxicity. However Hemerythrin is classically described as Oxygen-binding through two attached Fe2+ ions. And the bacterial NorA is a regulator of response to NO, which suggests yet another set-up for its metal ligands. In Staphylococcus aureus the iron-sulfur cluster repair protein ScdA has been noted to be important when the organism switches to living in environments with low oxygen concentrations; perhaps this protein acts as an oxygen store or scavenger.	0.000112857
NZ_CP016306.1\|WP_029624339.1\|3028796_3029579_+\|glucose-1-dehydrogenase	gnl\|CDD\|187600	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs. This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	6.10592e-86
NZ_CP016306.1\|WP_010124144.1\|3037174_3037492_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|178203	PLN02593, PLN02593, adrenodoxin-like ferredoxin protein.	4.02302e-18
NZ_CP016306.1\|WP_010124143.1\|3035984_3037160_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	5.21461e-88
NZ_CP016306.1\|WP_029624341.1\|3033733_3034747_-\|zinc-binding-dehydrogenase	gnl\|CDD\|176195	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.	4.68371e-90
NZ_CP016306.1\|WP_029624340.1\|3032469_3033741_-\|sulfotransferase	gnl\|CDD\|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	6.65431e-35
NZ_CP016306.1\|WP_138956617.1\|3030837_3031206_+\|STAS/SEC14-domain-containing-protein	gnl\|CDD\|378774	pfam11964, SpoIIAA-like, SpoIIAA-like. These proteins adopt an alpha/beta SpoIIAA-like fold, similar to that found in STAT (pfam01740). They adopt open and closed conformations arising from different arrangements of their alpha-2 and alpha-3 helices. They may be membrane associated and may function as carriers of non-polar compounds.	5.92953e-22
NZ_CP016306.1\|WP_010124147.1\|3038336_3039557_+\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0
NZ_CP016306.1\|WP_138956618.1\|3041321_3043115_+\|AcrB/AcrD/AcrF-family-protein	gnl\|CDD\|224206	COG1287, COG1287, Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only].	7.7933e-06
NZ_CP016306.1\|WP_010124152.1\|3044725_3046237_-\|ATP-binding-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	3.22224e-17

>NZ_CP016306.1|WP_010124144.1|3037174_3037492_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MPSITYIQQDGVAVSADALPLMTLMETALMGGVDGIIGTCGGICSCATCHVWIDPAWADRLEAPNAEEAEMIEGLVHRQPTSRLGCQVALNEALDGLIVRVPPAE
>NZ_CP016306.1|WP_010124143.1|3035984_3037160_+|cytochrome-P450
MAHDDVNYDPFDYALHDDPYQVYRRLRDEAPVFHNARFDFWALSRYDDCLAAVRNFGLFSSAQGTTLEPLKAQLPVLINADPPVHTRMRHLIAGLFTPAKVAVLEDNVRTLARTLLAPHRDAGRIDIITDFAAKLPMAIICRLLGFPSADEDKLRDWTDTVVHRDEGVFEMPDEGMHATIALFGYFDEDMKRRAGEPPRDDIIAALMAAEAAGELTHEEVLGYIFILSIAGNETTTKLIGNMVFQLHRHPDQLALLRADPALLPSAIEETMRFDGPTQMMARTTTREVELHGRTIPAGAKVALLFTCANRDERKYEHAEMYDIRRNPRDHLGFGGGLHACLGAALARLEAKVAMEELLAMMGDFAVDEAGLQRMHSPQVRGFTHVPVTFTA
>NZ_CP016306.1|WP_029624342.1|3034843_3035698_-|helix-turn-helix-transcriptional-regulator
MAQLNWTTLAETSVEGIAVQLRRYDLPAPVEMTVREERPVVSMMLPPYPVERLGRYDGGGDYHGLGNIVFTPPAADCHFRGDGGKPMTLSCLFDRTLFDRVTRIDDGWSRGRLLATLDVGGTAGGAIDAMLRRMAEELRAPGFATETLIEGLGLAALAELSRFLHADTTSAPRTSGQLNATQLRRLDEYVDAFPRRAPTISTLAGLLGMSPRRLTTLFRDTTGLTVRAWVEAKRMDQARRLLADTDLPLKAIAYDLGFANQGVFSTAFRRVAGLAPSTYRDRYK
>NZ_CP016306.1|WP_029624341.1|3033733_3034747_-|zinc-binding-dehydrogenase
MKAVRVHGPDDVRLDEIDTPVAGPKDVIVRVATAGICGSDVTYVHAGGVAAPTIDPFGLGHELSGTVSEVGADVTGISAGDRVIVNPMGDGNGIGNGVPEGAFAPYLLVRNATVGGAIHKIPDTMAFDRAALAEPLSVGLHAVNRSGAKPGDKVVLFGAGPIGLGILLFLKQRGLTDIAVVDMTEQRLERARQLGATVTINPTNEDVEAALGKAFGAGDVFGWPVVNANLWFEVTGAAPVLQSIVRMAPFHATMLVVAVHHEPVPVNFQMALGKEMSIITSMAYPDEFPDVIATLNDPAIDVAPMISHSFPLDDFMTAFAVAQDKDASAKVLVTFDD
>NZ_CP016306.1|WP_029624340.1|3032469_3033741_-|sulfotransferase
MTDTNMIRIADLANPELTDLQKMVIGSAPPVTMDIEAVLAAARAATGLDDFGAPDFRERLGVWLAAFDADTGLGPLGRAGMFGDCVRYASARLRVENLHRRHPEIADVAIDRPILIAGLPRSGTTHLVNILAADPRLRSMPLWETMEPIPADNDPQTVPGEDPRYTRTREMWGQFETLVPLMPAMHEMAPDHTHEDIELQGADFSSYLPEWLSRPYAWREYYARHDQTPHYAYGKRVLQAMTWLRGPNRWVMKSPPHMENFGPLTATYPDATVIVTHRDPLAVIQSAITMLAYGDRIRRTLPLDLNELATYWIDRIEMLLRACVRDHDKLPAGRSLDVLFHEYMADQKAVIAKVYTMADLEMTPDAEASIDGFLAANPRGKHGQVVYDLAGDFGVNIGELRERFQFYYDRFPVRRERMAGETA
>NZ_CP016306.1|WP_010124138.1|3031249_3032473_-|hypothetical-protein
MTDAANDRLLSGRAWDDYCETVRRAGHMINRFGDDADTLDRAEWYRFMTRLMRNGFERFMENCEPERPRLRDAPWRQGINFQSPDQDHLLAEFVDGSADYRIVGNRGTIPYFVMAAWDAKQPTDIGARDWAERGTDGLAEFDPATLRTTGFLQSDTIRFDADGNFEVIVSQKKPEGDVAWLPISEHCVGLLVRTVYHERGKTVAPVMRIERLDGSEPRPIRPADMSEALAKSGQLVLAYAELVRAWWQDNLGKRPNRVRFSRAVYLSNGGVPDRHHGFGTWEKAADEALVLHFTPTECDYWIFQLCNIWQENLDNYEDGQGYVQKYTANYEADGSIRLIVADEDPGIGGNWIDPYGHAHGGWSLRLIKTQGEPPAVTLHRVSLAALKRDGLAALDTVEAVETGEITD
>NZ_CP016306.1|WP_138956617.1|3030837_3031206_+|STAS/SEC14-domain-containing-protein
MLEILPSPDHVAAYRLAGTLDGDDYDRMIADIEARLARHEKIGVLADLTHFTDITFEAGLKDARYSLSKLFQLNRFPREAVITDRQWIRTMVNVMRPLVPFVELRTFEPRDAAEAMDWAAGI
>NZ_CP016306.1|WP_010124135.1|3029967_3030657_-|hypothetical-protein
MKFRGNFLAAMFLCSLTASNTAVAQTGLMGGLAGFSGCVQGCMEERTISGKQCDALCRCVLTIELSRSQEELQRMQPKAKACRAKILQGVQSSTAEPLPPRNGPTSATAGRSIGSDILVCTPQYTLPDGSQSQEMAQAIASGEMKQHWTDVDGQLNGMKADKKSAFHKVAATDGIRLTISHFRSKDKVAALAVMPGNNGQCPPRHRSELYNLNEWLSKPGIRPRGITGR
>NZ_CP016306.1|WP_029624339.1|3028796_3029579_+|glucose-1-dehydrogenase
MRRLEGKVAIVTGGARGIGEGIVRRFVQEGARVVIADLLEAEGTALAAELGDVTVFEKLNVSSRAEWDRVIAATEARFGKLDCLVNNAGILIFKALDDLTEEEMRRIIEVNLIGTMIGTQAVIPAIERAGGGTIINMSSADGISAANGLSPYCASKFGVRGFSQSVALELGPRGIRVNTIHPGGIYTPLANQAGVTREMFDMGFKVYPAQRAGDPADIGAAAAFLASDDAAYCIGTELSVDGGLNAGHYYMAVPGAPKQG
>NZ_CP016306.1|WP_010124132.1|3028511_3028712_+|hypothetical-protein
MNPGDAAEASGLLIRDGGGFVLKCDGGGVWRLDLPRTPVDLVEKRVRVSGIRLPDGRIEASAIRPD
>NZ_CP016306.1|WP_010124147.1|3038336_3039557_+|argininosuccinate-synthase
MTNDVKRVVLAYSGGLDTSVILKWLQQTYGCEVVTFTADLGQGEELEPARAKAKLMGIKDEHIFIDDLREEFVKDYVYPMMRANALYEGLYLLGTSIARPLIAKRQIEIAKMVGADAVSHGATGKGNDQVRFELGYYALSPDIKVIAPWREWDLTSRTALIDFAEKHQIPVPKDKRGESPFSTDANLLHTSSEGKVLEDPWEEVPDYVFSRTVNPEDAPDSPEIITVDFERGDAVAINGEGLSPATLLAKLNDLGRKHGIGRLDLVENRFVGMKSRGMYETPGGTILHLAHRGIEQITLDRGAAHLKDELAPRYAELIYNGFWFSPEREMLQAAIDHSQDKVTGTVRLKLYKGGVYVIGRKSPYTLYSEKVVTFEDDAGAYDQRDAAGFIKLNALRLRLLGRRDGR
>NZ_CP016306.1|WP_010124148.1|3039618_3041223_-|hypothetical-protein
MTRIRNHAIALAAILIFAAAAWFRIAGTLAEPLWLDEAYSAYAANKGFDFLWQIVPRYETHPPFYYSLLRLWTLGFGDSLAGLRALGMVCGMLTLPVMALAAREAARMLRLPALPIMAASLVLAALSPALVEMAREVRPYPVLILVYAMALLALLRAARITGETGAIPPRPFALYIASLACTFWLHSLGVLYAASLGLAALALIARRGLARNDWLRFFGGHALAGLLYLPGLLILIDQAPTWVQSTWLRFSFTGLEWRLAELYGVRTITGMIAAGVLALFGLWTLAWSGPGRRLGLALLATSLIPVIASITVSLLVAPVFIVRTMTAVAVPTLLLFAIGAGGFLATRGWWRWLAPLPLIVLAWQMVTIDRQRRAGPPMQDWYPALRWLDERYRPGDIVWAYPNEGALPFDYAARDLGMIVATRPIPTAVPTLNGGPGAWNPTGSRGVVSLPAERLKALADAPDAQRVPTIWLLRLGANAYDKGDHLLRALEFGRVRVADCETYPIDIIGLARPDVASPPPSFPAKRARCIPSKP
>NZ_CP016306.1|WP_138956618.1|3041321_3043115_+|AcrB/AcrD/AcrF-family-protein
MQHEPIDLPVAQTTATPSARWWGGLLALWASAAAWMVWRQWPAIVMGALPDTDDNMRMLQVRDWLAGQGWFDTRQSRLDWPVGADIHWSRLVDLPLAAIIRPLAPFIGQPAAELAAAVIVPLITLLAAMAAAALIARRTIAPSAWGWAPLILLFAGPVTGMLSPLRIDHHGWQIVALLAMAGGLVAPERRAGGAVAGLAIAASLAIGVEMLPFLLLGLALAAFGWIAEPAERARLRMLAVTLAIGIGAALLLFIPPAARFGFGCDTLSVAWALPILIGCAGIGVATIRPVATPGRRVAVLGLIGVAAALPLAGPAGGCLIDPYHAVDPEARRLWLEMVVEALPLYRQSTETLVAALVLPLIGVVGALAMLRIRGWDRGWLILLALAIAAIGLMLLQTRAAVAAQALAVPGAAALGWLAHRRIAASQSSLIRVFGTVLLALTVTALIPRMVVALAVGDPPDTTSEARAKSATTACLDSTALAALDAVPAGTMLATIDATPALIVHSHHRGIAGPYHRNGRAIADVMAAWSGDDTAARTILKRHQATLVAICGTPTEAEIYARRNPQGLHARLSAGHVPHWLAPVAAGGTPWRVWRIIG
>NZ_CP016306.1|WP_010124151.1|3043167_3044715_+|hypothetical-protein
MTATSPNDRQPWWADWRYAVALVLLCAVPLIYPPLPPLTDVLGHLARYHVQLTIGDSPYLSRYFGFEWALLGNLGVDLLVIPMSKLFGLQLSVKLIALAVPPLTAAGLLLIAREVHGRVPPTAAFALPLAFGYPFQFGFLNFALSMALAFLAFALWLRLGRAGRWTLRAALFVPIGSLIWLVHSFGWGVLGLLAFASELVRDRGQGGSRFHAIWRAGLATWPLWPPIALMLAWRSGNVAGQTGDWFNLAAKFRWLIWALRERWMLFDIGSVAVLCGLLVAGLFRIRLRFERMLGLATLILLLVFILLPRILLGSAYADMRLLPYALAIGLIALAPAADSSRRFITGIALAATLFCVARVGATTWNFAHFSRAYDGQLGAIDHIRPGSAVMVLVNLKCQSHWATSRMDHLGSQAIVRRDAFANGQWAMAGAQLLTVKYAAAGRFATDPTQLLRPQECHGAGEPTWDDTLANFPRDAFDYFWLIDMPRDRWPHEPDLVPIWHGRDRGVLYRVVKPAG
>NZ_CP016306.1|WP_010124152.1|3044725_3046237_-|ATP-binding-protein
MTINIEMGNDAAGRPVVMDVEELLATRLLVQGNSGSGKSHLLRRMLEESAGVVQQIVIDPEGDFVTLSGPFGHLAIEAGDYSEAEIARVATRVREHRVSVVLSLEGLELEAQMRCAAVFLAALFDAPRDHWYPALVVVDEAQLFAPAVAGEVSDEARRASLGAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEQIRDLARGQFLALGPAVSRRPVAINIGTVQTSARSGSPKLVPLPAASGEDVGQLILARDDSPPPPPPPVRAPVPSEELIRTIARPQLAPATDSPAAPAMDEDEREAIIAAVLADISADPDASFRSVAVLYQDFQLRCRMRRLSDVPLDLPAFRRRMAMARAGLFDEREEGWADALALAGELPEDMLGAFLLIARAAREGREAPGETELGEVYGTRSPGRVRRLIAYMEARDLIVVRTDLGGKRSIVLPRLGWTTASSAADAEAPARPAPRPTDNATLF
>NZ_CP016306.1|WP_010124153.1|3046283_3046466_-|hypothetical-protein
MRNSEAYKNRQRRDALRVARALMVDALDRLDAHSRSPAAATLDLALHHLDRELKAPVPMS
>NZ_CP016306.1|WP_157663928.1|3046652_3046817_-|hypothetical-protein
MPNQKQDGHDEMARNQERERQQQAKRQQQQQQRGQPSDRQGDEGRERTDRDKQR
>NZ_CP016306.1|WP_010124154.1|3046969_3047263_-|hypothetical-protein
MRLLKIAATFFAFTAPVLAIAPASAKTEWTESRFTRNGDEYVVKSAQVGEITRLKGHVVGKFVKFDLNVRGDRVRGIVNNTNVEFRRSDWVAQIASR
>NZ_CP016306.1|WP_010124155.1|3047383_3047806_-|hemerythrin-domain-containing-protein
MSTIPSLRREHSDLTRRAMRLRQAIAQPTMSPRLLQERREFADLLARHLAAEDGLIYPSLIADGDRRMAAVARMFVDELGGLGAAWSEYCRLWDDRAIAADWRGFAAATEPLLNLLATRILREDRILYPLAERAVARRAA
>NZ_CP016306.1|WP_010124157.1|3047965_3049258_+|homoserine-dehydrogenase
MTQPLRIALAGLGTVGGGVVKLLDANRALIERRAGRPIVITAISARDRTRDRGVDLSRFDWADDTAALAARDDVDVVVELIGGADGPALTLARATLAGGKAFVTANKAMIAHHGIELAEAAEKAGAALKYEAAVAGGIPVIKGLREGAAANEIGHVYGILNGTCNYILTKMEQEGLDFADVLAEAQALGYAEADPSFDIDGVDAAHKLSILASLAFGTTLDFDAVQISGIRHVIAADIAEAAALGFRVRLVGLAEAGGGGLFQRVHACLVPLAHPLAHVVGSLNAVVAEGNFVGRLFFEGRGAGEGPTASAVVADLIDIARGEYGPAFAMPVASLARLGPAAAGERHGRAYLRFTVADRPGVLAEITAAMRDAGVSIESMIQRGVAADGNVLLVMVTHDCPEQAVTQALERLNGSSSLLGKPMLMHILDI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

326218 : 335592

Agrobacterium_phage(14.29%)

protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010123349.1\|326218_326893_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	8.0e-60	59.7
WP_010123347.1\|327001_328270_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.4e-128	58.2
WP_010123346.1\|328440_329001_+	TIGR00645 family protein	K4K6D8	Caulobacter_phage	3.6e-21	33.1
WP_010123345.1\|329298_331707_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	2.8e-208	49.7
WP_010123343.1\|331943_332216_+	HU family DNA-binding protein	Q6QIE5	Burkholderia_phage	4.2e-20	60.7
WP_010123342.1\|332615_333593_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.2e-67	44.6
WP_010123341.1\|333652_333922_-	acyl carrier protein	NA	NA	NA	NA
WP_037495032.1\|334074_335592_+	acyl-CoA ligase (AMP-forming), exosortase A system-associated	A0A2K9KZV5	Tupanvirus	3.5e-15	22.9

DBSCAN-SWA_2

2751588 : 2819486

Synechococcus_phage(28.57%)

holin,transposase,integrase

attL 2740917:2740933|attR 2828408:2828424

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2740917:2740933	attL	NA	NA	NA	NA
WP_138956794.1\|2751588_2752759_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.9e-25	30.0
WP_037496769.1\|2753116_2753581_+	DUF305 domain-containing protein	NA	NA	NA	NA
WP_029624739.1\|2753647_2755180_+	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	2.1e-07	33.9
WP_029624738.1\|2755169_2755793_+	response regulator transcription factor	NA	NA	NA	NA
WP_010126951.1\|2755872_2756280_+	response regulator	NA	NA	NA	NA
WP_010126950.1\|2756585_2757572_+	decarboxylating 6-phosphogluconate dehydrogenase	E3SKF4	Synechococcus_phage	8.6e-79	46.4
WP_010126949.1\|2758021_2760457_+	glycosyltransferase	NA	NA	NA	NA
WP_010126948.1\|2760604_2761828_+	glycosidase	NA	NA	NA	NA
WP_029624736.1\|2761981_2763265_-	hypothetical protein	NA	NA	NA	NA
WP_010126944.1\|2763474_2763849_-	hypothetical protein	NA	NA	NA	NA
WP_010126940.1\|2764460_2764874_-	DUF1622 domain-containing protein	NA	NA	NA	NA
WP_083831283.1\|2764860_2765574_-	cytochrome C	NA	NA	NA	NA
WP_010126936.1\|2765573_2766299_-	hypothetical protein	NA	NA	NA	NA
WP_086495569.1\|2766298_2768212_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	A0A0E3F6W9	Synechococcus_phage	1.7e-06	44.1
WP_010126926.1\|2768232_2768565_-	hypothetical protein	NA	NA	NA	NA
WP_086495684.1\|2768621_2768840_-	hypothetical protein	NA	NA	NA	NA
WP_010126928.1\|2768857_2769310_-	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA
WP_083831282.1\|2769443_2769788_-	hypothetical protein	NA	NA	NA	NA
WP_010126929.1\|2769917_2770265_-	hypothetical protein	NA	NA	NA	NA
WP_029624733.1\|2771082_2772888_+	copper resistance system multicopper oxidase	NA	NA	NA	NA
WP_037496754.1\|2773989_2774484_-	DUF411 domain-containing protein	NA	NA	NA	NA
WP_157663893.1\|2774682_2775854_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_029624796.1\|2776487_2776895_+	DUF305 domain-containing protein	NA	NA	NA	NA
WP_010127396.1\|2777229_2777505_+	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA
WP_010127398.1\|2777513_2778509_+	CDF family Co(II)/Ni(II) efflux transporter DmeF	NA	NA	NA	NA
WP_010127400.1\|2778505_2778700_+	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_050805462.1\|2779331_2780615_+	TolC family protein	NA	NA	NA	NA
WP_029624798.1\|2780614_2781865_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_010127405.1\|2781854_2785061_+	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA
WP_010127406.1\|2785970_2786165_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_138956816.1\|2788893_2791020_-	TonB-dependent receptor	NA	NA	NA	NA
WP_029624902.1\|2791228_2791984_-	glucose 1-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	6.5e-18	31.7
WP_010128054.1\|2792006_2794316_-	arylsulfatase	NA	NA	NA	NA
WP_010128055.1\|2794529_2795798_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_086495572.1\|2796441_2797671_-	DegT/DnrJ/EryC1/StrS aminotransferase family protein	C7U074	Ostreococcus_tauri_virus	1.7e-60	37.9
WP_086495576.1\|2797809_2798883_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_037495572.1\|2798937_2799813_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_029624366.1\|2799824_2800586_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_029624365.1\|2800622_2801012_-	steroid Delta-isomerase	NA	NA	NA	NA
WP_010124306.1\|2801008_2802625_-\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	2.4e-62	32.5
WP_010124305.1\|2802621_2803557_-	aldo/keto reductase	NA	NA	NA	NA
WP_138956628.1\|2803727_2803931_-	hypothetical protein	NA	NA	NA	NA
WP_037495565.1\|2804161_2806504_+	arylsulfatase	NA	NA	NA	NA
WP_138956629.1\|2806634_2808959_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_029624364.1\|2809127_2810312_+	DUF1214 domain-containing protein	NA	NA	NA	NA
WP_138956627.1\|2810466_2813007_+	TonB-dependent receptor plug domain-containing protein	NA	NA	NA	NA
WP_157663893.1\|2813327_2814498_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_010124636.1\|2814752_2816129_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_010124635.1\|2816387_2817425_+	hypothetical protein	NA	NA	NA	NA
WP_010124634.1\|2817687_2818653_-	hypothetical protein	NA	NA	NA	NA
WP_010124633.1\|2818652_2819486_-\|transposase	transposase	NA	NA	NA	NA
2828408:2828424	attR	NA	NA	NA	NA

DBSCAN-SWA_3

3076283 : 3087787

Indivirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010124187.1\|3076283_3077783_+	catalase	A0A2K9L0T1	Tupanvirus	8.2e-89	43.4
WP_010124188.1\|3078018_3078258_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_010124189.1\|3078261_3078954_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_029624352.1\|3078937_3079912_-	glucokinase	NA	NA	NA	NA
WP_010124192.1\|3079925_3080348_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2I2L4Y7	Orpheovirus	4.0e-09	33.8
WP_010124193.1\|3080353_3081502_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	8.5e-54	38.9
WP_010124195.1\|3081485_3082100_-	riboflavin synthase	A0A1V0SE20	Indivirus	2.4e-15	33.0
WP_029624353.1\|3082108_3083056_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	7.8e-29	30.6
WP_029624354.1\|3083090_3083414_-	hypothetical protein	NA	NA	NA	NA
WP_010124198.1\|3083524_3084163_-	energy transducer TonB	NA	NA	NA	NA
WP_010124199.1\|3084291_3085164_-	alpha/beta hydrolase	G1BRG0	Mycobacterium_phage	8.0e-12	36.1
WP_010124201.1\|3085171_3086554_-	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	1.1e-50	30.0
WP_010124203.1\|3086582_3086993_-	molecular chaperone DnaJ	NA	NA	NA	NA
WP_010124204.1\|3086992_3087787_-	AAA family ATPase	A4JWV7	Burkholderia_virus	1.0e-05	32.9

DBSCAN-SWA_4

3613055 : 3664473

Rhodobacter_phage(18.18%)

tail,capsid,protease,head,portal,integrase,terminase

attL 3609247:3609263|attR 3630321:3630337

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3609247:3609263	attL	NA	NA	NA	NA
WP_010125871.1\|3613055_3614285_-\|integrase	tyrosine-type recombinase/integrase	A0A1W6DX53	Sphingobium_phage	1.7e-79	39.3
WP_010125873.1\|3614433_3614853_-	hypothetical protein	NA	NA	NA	NA
WP_010125874.1\|3614849_3615137_-	hypothetical protein	NA	NA	NA	NA
WP_138956693.1\|3615133_3615625_-	hypothetical protein	NA	NA	NA	NA
WP_010125877.1\|3615662_3616268_-	hypothetical protein	NA	NA	NA	NA
WP_010125878.1\|3616264_3616462_-	hypothetical protein	NA	NA	NA	NA
WP_010125879.1\|3616458_3616767_-	hypothetical protein	NA	NA	NA	NA
WP_083831244.1\|3616900_3617290_+	hypothetical protein	NA	NA	NA	NA
WP_138956698.1\|3617282_3617849_-	helix-turn-helix domain-containing protein	A0A1X9HW95	Ruegeria_phage	1.8e-12	37.2
WP_010125882.1\|3618570_3618801_-	hypothetical protein	NA	NA	NA	NA
WP_010125883.1\|3618886_3619378_+	hypothetical protein	NA	NA	NA	NA
WP_010125884.1\|3619374_3620022_+	hypothetical protein	NA	NA	NA	NA
WP_010125885.1\|3620143_3620638_+	hypothetical protein	NA	NA	NA	NA
WP_157663934.1\|3620676_3620823_+	hypothetical protein	NA	NA	NA	NA
WP_010125887.1\|3620819_3621635_+	hypothetical protein	A0A219YFC7	Ochrobactrum_phage	3.7e-35	39.9
WP_010125889.1\|3621631_3622294_+	hypothetical protein	A0A240F4W6	Ochrobactrum_phage	4.6e-20	34.4
WP_010125890.1\|3622392_3623622_+	DNA primase	A0A0A8IL83	Aurantimonas_phage	3.4e-08	26.6
WP_010125891.1\|3623618_3624041_+	DUF2312 domain-containing protein	NA	NA	NA	NA
WP_010125892.1\|3624045_3625644_+	DNA primase	I3UM64	Rhodobacter_phage	1.5e-35	29.8
WP_157663935.1\|3626040_3626478_+	hypothetical protein	NA	NA	NA	NA
WP_010125894.1\|3626656_3627010_+	HNH endonuclease	I3ULZ4	Rhodobacter_phage	8.2e-32	57.3
WP_050805418.1\|3627094_3627562_+	hypothetical protein	NA	NA	NA	NA
WP_050805419.1\|3627569_3629270_+\|terminase	terminase large subunit	Q3HQS7	Burkholderia_phage	7.2e-166	53.0
WP_010125898.1\|3629266_3630496_+\|portal	phage portal protein	A0A0U2BXP2	Paracoccus_phage	1.6e-114	56.7
3630321:3630337	attR	NA	NA	NA	NA
WP_029624585.1\|3630503_3631160_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	7.1e-37	46.6
WP_010125900.1\|3631190_3632519_+\|capsid	phage major capsid protein	A0A2H4JD98	uncultured_Caudovirales_phage	2.3e-143	65.6
WP_010125902.1\|3632581_3632821_+	hypothetical protein	NA	NA	NA	NA
WP_010125903.1\|3632826_3633234_+	hypothetical protein	NA	NA	NA	NA
WP_010125904.1\|3633241_3633988_+	hypothetical protein	NA	NA	NA	NA
WP_010125905.1\|3633984_3634809_+	hypothetical protein	I3UM02	Rhodobacter_phage	8.1e-14	38.2
WP_010125906.1\|3634808_3635159_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_010125907.1\|3635158_3635653_+	hypothetical protein	NA	NA	NA	NA
WP_010125908.1\|3635654_3636065_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_010125909.1\|3636085_3636511_+	hypothetical protein	NA	NA	NA	NA
WP_010125910.1\|3636512_3636914_+	hypothetical protein	NA	NA	NA	NA
WP_083831245.1\|3636913_3637030_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_010125911.1\|3637039_3638977_+	hypothetical protein	A0A2I5ARC1	Synechococcus_phage	8.0e-12	34.0
WP_010125913.1\|3638980_3639580_+	hypothetical protein	NA	NA	NA	NA
WP_010125914.1\|3639576_3640218_+	hypothetical protein	NA	NA	NA	NA
WP_010125915.1\|3640214_3640652_+	hypothetical protein	NA	NA	NA	NA
WP_010125916.1\|3640644_3643845_+	hypothetical protein	NA	NA	NA	NA
WP_010125917.1\|3643841_3644402_+	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_083831249.1\|3644401_3644656_+	hypothetical protein	K4I403	Acidithiobacillus_phage	9.4e-06	38.5
WP_138956694.1\|3644664_3644961_+	hypothetical protein	NA	NA	NA	NA
WP_029624586.1\|3645176_3645734_+	TIGR02594 family protein	A0A1B0WLU0	Flavobacterium_phage	3.6e-34	48.5
WP_010125923.1\|3645730_3646105_+	hypothetical protein	A0A291AUV3	Sinorhizobium_phage	1.1e-37	55.3
WP_010125924.1\|3646101_3646479_+	hypothetical protein	NA	NA	NA	NA
WP_010125925.1\|3646468_3646675_+	hypothetical protein	NA	NA	NA	NA
WP_010125926.1\|3646674_3647076_+	response regulator transcription factor	NA	NA	NA	NA
WP_157663936.1\|3647072_3647225_+	hypothetical protein	NA	NA	NA	NA
WP_010125927.1\|3647224_3648631_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_010125928.1\|3648627_3649071_-	hypothetical protein	NA	NA	NA	NA
WP_010125929.1\|3649628_3650195_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_138956695.1\|3650283_3651048_+	hypothetical protein	NA	NA	NA	NA
WP_010125932.1\|3651130_3651748_-	hypothetical protein	NA	NA	NA	NA
WP_029624587.1\|3651860_3652292_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_029624588.1\|3652431_3654105_+	MFS transporter	NA	NA	NA	NA
WP_010125937.1\|3654157_3654814_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_010125938.1\|3654942_3655410_+	hypothetical protein	NA	NA	NA	NA
WP_010125939.1\|3655406_3656732_+	DNA-packaging protein	A0A0K1LMR9	Caulobacter_phage	3.3e-73	39.2
WP_010125941.1\|3656774_3657890_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	6.6e-51	35.5
WP_010125942.1\|3657886_3658201_+	hypothetical protein	K4I011	Acidithiobacillus_phage	1.2e-07	44.7
WP_010125943.1\|3658197_3658611_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	4.0e-22	49.2
WP_010125945.1\|3658625_3659765_+\|capsid	phage major capsid protein	Q8W627	Enterobacteria_phage	5.3e-80	46.8
WP_010125946.1\|3659887_3660154_+	hypothetical protein	NA	NA	NA	NA
WP_157663937.1\|3660164_3660308_+	hypothetical protein	NA	NA	NA	NA
WP_010125947.1\|3660314_3661775_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_138956699.1\|3661735_3662068_+	hypothetical protein	NA	NA	NA	NA
WP_010125950.1\|3662067_3662604_+	hypothetical protein	NA	NA	NA	NA
WP_010125951.1\|3662600_3662933_+\|head	phage head closure protein	NA	NA	NA	NA
WP_010125953.1\|3662929_3663139_+	hypothetical protein	NA	NA	NA	NA
WP_010125954.1\|3663135_3663522_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_010125955.1\|3663569_3663977_+\|tail	phage major tail protein, TP901-1 family	I3UM07	Rhodobacter_phage	5.8e-13	36.2
WP_010125956.1\|3663973_3664276_+	gene transfer agent family protein	NA	NA	NA	NA
WP_010125957.1\|3664275_3664473_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA

DBSCAN-SWA_5

3930115 : 3993528

uncultured_virus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157663925.1\|3930115_3931478_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_086495634.1\|3931558_3931969_+	EAL domain-containing protein	NA	NA	NA	NA
WP_010122977.1\|3932132_3933311_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010122978.1\|3933532_3934120_-	hypothetical protein	NA	NA	NA	NA
WP_050805335.1\|3934204_3935515_-	S8 family serine peptidase	NA	NA	NA	NA
WP_010122981.1\|3935580_3936084_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_086495636.1\|3936088_3936790_+	hypothetical protein	NA	NA	NA	NA
WP_010124003.1\|3937582_3938317_+	hypothetical protein	NA	NA	NA	NA
WP_010124001.1\|3938325_3939078_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_083831184.1\|3939131_3940013_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010123998.1\|3940220_3941396_+	DUF1214 domain-containing protein	NA	NA	NA	NA
WP_138956610.1\|3941476_3943666_+	TonB-dependent receptor	NA	NA	NA	NA
WP_138956609.1\|3943995_3944208_-	hypothetical protein	NA	NA	NA	NA
WP_010123995.1\|3944511_3944799_+	co-chaperone GroES	A0A221S4G8	uncultured_virus	4.5e-20	53.3
WP_010123994.1\|3944847_3946476_+	chaperonin GroEL	A0A219YK78	uncultured_virus	9.3e-171	59.4
WP_138956608.1\|3946540_3946735_+	hypothetical protein	NA	NA	NA	NA
WP_157663943.1\|3946879_3947161_+	hypothetical protein	NA	NA	NA	NA
WP_138956794.1\|3947642_3948813_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.9e-25	30.0
WP_010128026.1\|3949244_3949655_-	hypothetical protein	NA	NA	NA	NA
WP_138956601.1\|3950142_3951506_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_010127410.1\|3952139_3952385_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_010127412.1\|3952381_3952771_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_010127414.1\|3953211_3953709_+	hypothetical protein	NA	NA	NA	NA
WP_010127415.1\|3953873_3954959_-	Fic family protein	D7RWK9	Brochothrix_phage	2.1e-25	28.8
WP_029624800.1\|3955452_3956265_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	4.0e-05	32.6
WP_010127417.1\|3956311_3957151_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	2.1e-09	34.5
WP_138956793.1\|3957235_3958599_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_010126913.1\|3959276_3960209_-	acyl dehydratase	NA	NA	NA	NA
WP_010126911.1\|3960211_3961420_-	thiolase family protein	NA	NA	NA	NA
WP_010126910.1\|3961532_3961976_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_010126909.1\|3962063_3962213_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA
WP_037496730.1\|3962209_3964381_-	cadmium-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.4e-65	29.2
WP_029624728.1\|3964385_3965168_-	DUF2189 domain-containing protein	NA	NA	NA	NA
WP_029624727.1\|3965186_3965375_-	hypothetical protein	NA	NA	NA	NA
WP_029624726.1\|3965371_3966250_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA
WP_010126903.1\|3966240_3966411_-	cbb3-type cytochrome c oxidase subunit 3	NA	NA	NA	NA
WP_010126902.1\|3966418_3967144_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA
WP_029624725.1\|3967150_3968797_-	cytochrome-c oxidase, cbb3-type subunit I	NA	NA	NA	NA
WP_010126900.1\|3969070_3969490_+	group III truncated hemoglobin	NA	NA	NA	NA
WP_010126899.1\|3969482_3969758_+	DUF1971 domain-containing protein	NA	NA	NA	NA
WP_010126898.1\|3969807_3971019_+	NO-inducible flavohemoprotein	NA	NA	NA	NA
WP_010126896.1\|3971031_3971496_+	hypothetical protein	NA	NA	NA	NA
WP_029624724.1\|3974007_3974667_-	carbonic anhydrase	NA	NA	NA	NA
WP_010126891.1\|3974663_3975305_-	peroxiredoxin	NA	NA	NA	NA
WP_138956742.1\|3975402_3975639_-	hypothetical protein	NA	NA	NA	NA
WP_138956741.1\|3975635_3976019_-	hypothetical protein	NA	NA	NA	NA
WP_010126890.1\|3976172_3977021_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010126889.1\|3977017_3977503_+	hypothetical protein	NA	NA	NA	NA
WP_029624723.1\|3978089_3978485_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_010126883.1\|3981673_3981907_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010126882.1\|3983494_3983827_+	hypothetical protein	NA	NA	NA	NA
WP_157663893.1\|3984910_3986082_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_157663944.1\|3986047_3987313_+	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	9.5e-30	29.3
WP_010126919.1\|3987387_3987810_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_010126920.1\|3987855_3988149_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_010126921.1\|3988165_3988948_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010126922.1\|3988970_3989753_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010126923.1\|3989767_3990577_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	4.2e-15	33.5
WP_086495641.1\|3990817_3992113_+	TonB-dependent receptor plug domain-containing protein	NA	NA	NA	NA
WP_138956793.1\|3992165_3993528_+\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

4113568 : 4122251

Catovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010125150.1\|4113568_4114321_-	molybdopterin-synthase adenylyltransferase MoeB	A0A1V0SAV8	Catovirus	7.9e-08	30.5
WP_010125151.1\|4114317_4114806_-	dUTP diphosphatase	S4TR87	Salmonella_phage	6.2e-30	43.7
WP_029624480.1\|4114865_4115546_-	type 1 glutamine amidotransferase domain-containing protein	NA	NA	NA	NA
WP_029624481.1\|4115553_4116741_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	6.8e-38	33.3
WP_010125155.1\|4116896_4119032_+	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	8.3e-119	40.1
WP_010125156.1\|4119083_4120622_-	2-polyprenylphenol 6-hydroxylase	A0A0R6PKQ6	Moraxella_phage	2.2e-25	26.0
WP_010125157.1\|4120618_4121347_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_010125158.1\|4121438_4122251_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	G3MA33	Bacillus_virus	9.1e-26	29.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016306

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection