CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP020812	Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed3, complete sequence	0 crisprs	NA	0
NZ_CP020810	Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence	0 crisprs	NA	0
NZ_CP020811	Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed2, complete sequence	0 crisprs	NA	1
NZ_CP020813	Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed4, complete sequence	0 crisprs	NA	0
NZ_CP020809	Mycobacterium dioxanotrophicus strain PH-06 chromosome, complete genome	0 crisprs	csa3,DEDDh,cas3,DinG,WYL,casR,cas4,Cas9_archaeal	9

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

47128 : 54160

Mycobacterium_phage(66.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087083518.1\|47128_48853_-	collagen-like protein	V5UPX1	Mycobacterium_phage	1.9e-17	56.6
WP_087083520.1\|48884_49415_-	hypothetical protein	V5UQR9	Mycobacterium_phage	3.3e-53	71.1
WP_157680455.1\|49332_50085_-	hypothetical protein	NA	NA	NA	NA
WP_087083523.1\|50755_51130_+	single-stranded DNA-binding protein	A0A222Z2F1	Arthrobacter_phage	9.6e-31	58.5
WP_157680456.1\|51230_51722_+	hypothetical protein	V5UN98	Mycobacterium_phage	1.5e-12	31.8
WP_157680457.1\|51777_53349_+	ParB N-terminal domain-containing protein	A0A2H4PED4	Mycobacterium_phage	3.7e-68	38.5
WP_087083527.1\|53494_54160_+	class I SAM-dependent methyltransferase	M4QQF3	Micromonas_pusilla_virus	8.5e-06	25.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP020809

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

76813 : 161396

Mycobacterium_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157680082.1\|76813_78211_+\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_087072432.1\|78553_79762_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_157680083.1\|79754_80693_-	EamA family transporter	NA	NA	NA	NA
WP_087072436.1\|82192_82663_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_087072438.1\|82962_84294_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_087072440.1\|84335_85136_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_087072441.1\|85208_86042_-	ABC transporter permease	NA	NA	NA	NA
WP_087072443.1\|86038_86899_-	ABC transporter permease	NA	NA	NA	NA
WP_087081395.1\|86928_88119_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.4e-22	34.3
WP_157680084.1\|88111_89014_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_087072458.1\|89292_90261_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_157680085.1\|90257_91436_-	hypothetical protein	NA	NA	NA	NA
WP_087072462.1\|97936_99232_+	triacylglycerol lipase	NA	NA	NA	NA
WP_087072464.1\|99351_100587_+	acyl-CoA desaturase	NA	NA	NA	NA
WP_157680087.1\|100941_101106_-	hypothetical protein	NA	NA	NA	NA
WP_087072468.1\|105466_106255_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	5.5e-44	42.8
WP_087072470.1\|106623_106896_+\|transposase	Tn3 family transposase	A0A125RQ78	Bacillus_phage	4.7e-11	46.5
WP_157680089.1\|109436_109889_+	hypothetical protein	NA	NA	NA	NA
WP_087072472.1\|109860_110229_+	hypothetical protein	NA	NA	NA	NA
WP_157680090.1\|110225_110366_+	hypothetical protein	NA	NA	NA	NA
WP_087072475.1\|110483_110795_-	EthD family reductase	NA	NA	NA	NA
WP_087072477.1\|111088_112084_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_087072479.1\|112492_112873_-	hypothetical protein	NA	NA	NA	NA
WP_087072483.1\|119191_120046_-	zeta toxin protein	NA	NA	NA	NA
WP_087081397.1\|120029_120497_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_087072485.1\|120702_121785_+	nucleotidyltransferase	NA	NA	NA	NA
WP_087072487.1\|121791_123354_+	dinucleotide-utilizing protein	NA	NA	NA	NA
WP_157680092.1\|123355_123859_+	hypothetical protein	NA	NA	NA	NA
WP_087081399.1\|123906_125349_+	SAVED domain-containing protein	NA	NA	NA	NA
WP_157680094.1\|125423_125561_-	hypothetical protein	NA	NA	NA	NA
WP_087072491.1\|125734_126448_-	transcriptional regulator	NA	NA	NA	NA
WP_087072493.1\|126659_126956_+	transcription factor WhiB	NA	NA	NA	NA
WP_157680096.1\|128243_129356_+	hypothetical protein	V5UNW4	Mycobacterium_phage	2.3e-48	35.4
WP_157680098.1\|130832_131282_+	hypothetical protein	NA	NA	NA	NA
WP_087072498.1\|132603_132792_+	hypothetical protein	NA	NA	NA	NA
WP_087072500.1\|133242_133497_-	hypothetical protein	NA	NA	NA	NA
WP_087081400.1\|133701_133947_+	transcriptional regulator	NA	NA	NA	NA
WP_011894055.1\|136599_137193_+	cadmium transporter	NA	NA	NA	NA
WP_011891571.1\|137282_138146_-	hypothetical protein	NA	NA	NA	NA
WP_157680418.1\|141251_141863_-\|transposase	TnsA-like heteromeric transposase endonuclease subunit	NA	NA	NA	NA
WP_087081402.1\|142558_143458_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA
WP_087072502.1\|143457_144201_-	ParA family protein	NA	NA	NA	NA
WP_087072506.1\|145330_145744_+	heme-binding protein	NA	NA	NA	NA
WP_087072508.1\|146306_146522_-	hypothetical protein	NA	NA	NA	NA
WP_087072510.1\|147284_148022_-	hypothetical protein	NA	NA	NA	NA
WP_157680100.1\|148018_148522_-	hypothetical protein	NA	NA	NA	NA
WP_087072514.1\|148622_148979_+	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_087072516.1\|148975_149542_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_087072518.1\|150232_151333_-	DUF2637 domain-containing protein	V5UP70	Mycobacterium_phage	3.1e-21	45.1
WP_157680101.1\|151657_151879_+	hypothetical protein	NA	NA	NA	NA
WP_087072520.1\|152139_153057_-	hypothetical protein	NA	NA	NA	NA
WP_087072522.1\|153213_154358_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.9e-31	34.6
WP_087072524.1\|154400_155546_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_087072525.1\|155793_156081_-	hypothetical protein	NA	NA	NA	NA
WP_087072527.1\|156479_156896_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_087072529.1\|156892_157141_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_157680102.1\|157154_157316_-	hypothetical protein	NA	NA	NA	NA
WP_087072531.1\|157482_158400_+\|transposase	transposase	NA	NA	NA	NA
WP_087072533.1\|160674_160974_+	hypothetical protein	NA	NA	NA	NA
WP_157680103.1\|160865_161396_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

785072 : 807515

Staphylococcus_phage(66.67%)

integrase,transposase,protease,holin

attL 784513:784530|attR 811031:811048

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
784513:784530	attL	NA	NA	NA	NA
WP_087073480.1\|785072_786260_+\|protease	acid resistance serine protease MarP	NA	NA	NA	NA
WP_087073482.1\|786266_787196_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_087073485.1\|787195_787717_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_087073487.1\|787868_788573_+	peptidase	NA	NA	NA	NA
WP_087073489.1\|788665_790627_-	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	3.3e-82	38.9
WP_087073491.1\|790701_791502_+	oxidoreductase	NA	NA	NA	NA
WP_087073493.1\|791927_792800_-	HAD-IB family hydrolase	NA	NA	NA	NA
WP_087073495.1\|793160_794231_+	AAA family ATPase	NA	NA	NA	NA
WP_087073497.1\|794227_795298_+	TadA family conjugal transfer-associated ATPase	NA	NA	NA	NA
WP_087073500.1\|798576_799002_-	hypothetical protein	NA	NA	NA	NA
WP_087073502.1\|799075_799636_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_087081559.1\|799695_800208_-	PaaI family thioesterase	NA	NA	NA	NA
WP_087072533.1\|800650_800950_-	hypothetical protein	NA	NA	NA	NA
WP_087072468.1\|800939_801728_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	5.5e-44	42.8
WP_087073504.1\|801754_803119_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_087073506.1\|803657_804107_-\|transposase	transposase	NA	NA	NA	NA
WP_087073508.1\|804103_806335_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_087081561.1\|806321_807515_-\|integrase	tyrosine-type recombinase/integrase	U3PJ31	Staphylococcus_phage	3.4e-05	26.9
811031:811048	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1194587 : 1236248

Mycobacterium_phage(91.84%)

integrase,capsid

attL 1186407:1186424|attR 1240102:1240119

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1186407:1186424	attL	NA	NA	NA	NA
WP_087074135.1\|1194587_1195790_-\|integrase	site-specific integrase	G8I4Q2	Mycobacterium_phage	4.9e-185	81.0
WP_087074138.1\|1196220_1197075_-	hypothetical protein	A0A1D8EX40	Mycobacterium_phage	3.2e-21	51.3
WP_087081678.1\|1197299_1197563_+	helix-turn-helix transcriptional regulator	A0A142KCM1	Gordonia_phage	1.1e-25	77.6
WP_157680423.1\|1197638_1197806_+	helix-turn-helix domain-containing protein	A0A0A7RVT4	Mycobacterium_phage	1.4e-10	67.3
WP_087074141.1\|1197802_1198216_+	hypothetical protein	NA	NA	NA	NA
WP_087074143.1\|1198212_1198947_+	hypothetical protein	G8I4R2	Mycobacterium_phage	6.3e-34	41.7
WP_083161949.1\|1199013_1199295_+	hypothetical protein	NA	NA	NA	NA
WP_087074145.1\|1199306_1199678_+	hypothetical protein	G8I4R4	Mycobacterium_phage	7.7e-49	74.0
WP_087074147.1\|1199674_1199929_+	hypothetical protein	A0A142ULA9	Mycobacterium_phage	5.2e-12	73.5
WP_087074149.1\|1199925_1200204_+	hypothetical protein	A0A142K839	Mycobacterium_phage	7.4e-20	62.1
WP_087074151.1\|1200200_1200566_+	hypothetical protein	A0A142ULK9	Mycobacterium_phage	1.1e-20	47.0
WP_087074153.1\|1200562_1201480_+	hypothetical protein	R4TQV3	Mycobacterium_phage	6.2e-124	71.2
WP_157680134.1\|1201476_1202475_+	recombinase RecT	A0A0A7RVR2	Mycobacterium_phage	4.1e-121	69.3
WP_087074157.1\|1202471_1202858_+	hypothetical protein	NA	NA	NA	NA
WP_087074159.1\|1202916_1203207_+	hypothetical protein	A0A2P1N389	Mycobacterium_phage	5.9e-20	56.2
WP_083161521.1\|1204065_1204500_+	RusA family crossover junction endodeoxyribonuclease	W0LKB6	Mycobacterium_phage	1.2e-56	77.5
WP_087074161.1\|1204496_1204742_+	hypothetical protein	G8I4S5	Mycobacterium_phage	2.0e-29	77.2
WP_087074163.1\|1204738_1205026_+	hypothetical protein	G8I4S7	Mycobacterium_phage	1.6e-17	67.2
WP_087074165.1\|1205022_1205397_+	hypothetical protein	NA	NA	NA	NA
WP_087074167.1\|1207133_1207460_+	hypothetical protein	Q854B8	Mycobacterium_phage	1.3e-31	60.2
WP_087074169.1\|1207467_1207830_+	hypothetical protein	A0A2P1N309	Mycobacterium_phage	1.3e-11	44.1
WP_157680135.1\|1208147_1208549_+	hypothetical protein	A0A076G7W4	Mycobacterium_phage	2.2e-33	72.0
WP_157680136.1\|1208649_1208802_+	hypothetical protein	A0A2P1N3A3	Mycobacterium_phage	1.5e-06	56.9
WP_087074173.1\|1208798_1209224_+	hypothetical protein	A0A068F8N7	Mycobacterium_phage	4.6e-21	58.3
WP_087074176.1\|1209223_1209586_+	hypothetical protein	A0A220NR71	Mycobacterium_phage	1.6e-59	88.0
WP_157680137.1\|1209585_1209744_+	hypothetical protein	A0A0A7S2F8	Mycobacterium_phage	4.8e-16	73.3
WP_157680138.1\|1209745_1209895_+	hypothetical protein	NA	NA	NA	NA
WP_087081682.1\|1210020_1210236_+	hypothetical protein	NA	NA	NA	NA
WP_087074178.1\|1210228_1210576_+	hypothetical protein	A0A2P1N309	Mycobacterium_phage	1.6e-11	50.0
WP_087074180.1\|1210572_1211529_+	hypothetical protein	A0A2D1G9W6	Mycobacterium_phage	8.6e-68	50.3
WP_157680139.1\|1211525_1211798_+	hypothetical protein	J7KFF9	Mycobacterium_virus	3.8e-13	53.0
WP_087074182.1\|1211794_1212076_+	WhiB family transcriptional regulator	NA	NA	NA	NA
WP_087074185.1\|1212598_1212874_+	helix-turn-helix domain-containing protein	A0A2R4AQF4	Mycobacterium_phage	6.6e-05	41.4
WP_087074187.1\|1212873_1213938_+	hypothetical protein	A0A076YNI8	Mycobacterium_phage	1.2e-25	61.9
WP_087074189.1\|1213934_1214306_+	hypothetical protein	A0A161BYJ7	Gordonia_phage	6.8e-21	48.0
WP_087074191.1\|1214305_1214569_+	hypothetical protein	G8I4T9	Mycobacterium_phage	3.6e-24	55.6
WP_157680140.1\|1214699_1215170_+	hypothetical protein	G8I4U0	Mycobacterium_phage	1.5e-52	69.5
WP_087074195.1\|1215755_1215989_+	hypothetical protein	A0A097EWJ5	Mycobacterium_phage	1.1e-05	46.9
WP_087074197.1\|1215970_1216558_+	recombinase family protein	G8I4U3	Mycobacterium_phage	6.0e-72	77.0
WP_087074199.1\|1216557_1216803_+	hypothetical protein	NA	NA	NA	NA
WP_157680141.1\|1216795_1217116_+	hypothetical protein	NA	NA	NA	NA
WP_087074203.1\|1217324_1217603_+	hypothetical protein	A0A088FQJ6	Mycobacterium_phage	5.1e-13	51.2
WP_157680142.1\|1217608_1218193_+	hypothetical protein	A0A088FUW9	Mycobacterium_phage	2.8e-05	47.7
WP_087074207.1\|1218224_1219766_+	hypothetical protein	G8I4L0	Mycobacterium_phage	2.6e-207	74.3
WP_087074209.1\|1219851_1220067_+	hypothetical protein	NA	NA	NA	NA
WP_087074211.1\|1220801_1221326_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_087074213.1\|1221322_1221739_+	DUF1360 domain-containing protein	G8I4L3	Mycobacterium_phage	1.1e-24	49.6
WP_087081684.1\|1221814_1223680_+	hypothetical protein	G8I4L4	Mycobacterium_phage	5.4e-223	63.7
WP_087074215.1\|1223822_1226306_+	hypothetical protein	G8I4L5	Mycobacterium_phage	4.4e-289	64.4
WP_157680143.1\|1226671_1228726_+\|capsid	major capsid protein	G8I4L7	Mycobacterium_phage	6.1e-212	74.2
WP_087074217.1\|1229676_1230069_+	hypothetical protein	G8I4L9	Mycobacterium_phage	2.4e-32	58.6
WP_087074219.1\|1230072_1230291_+	hypothetical protein	G1JX43	Mycobacterium_phage	5.6e-15	61.1
WP_157680424.1\|1230362_1230716_+	DUF2746 domain-containing protein	A0A1D8EX29	Mycobacterium_phage	2.2e-05	54.8
WP_087074222.1\|1230978_1232046_+	hypothetical protein	A0A2P1JRD2	Mycobacterium_phage	2.6e-105	55.4
WP_087074224.1\|1232135_1233614_+	hypothetical protein	A0A2D1GPL2	Mycobacterium_phage	9.4e-05	73.3
WP_087074225.1\|1233615_1234374_+	hypothetical protein	G8I4M6	Mycobacterium_phage	2.9e-82	59.4
WP_087074227.1\|1234370_1234901_+	hypothetical protein	F1B2Q0	Tsukamurella_phage	1.9e-40	48.6
WP_087074229.1\|1234914_1235268_+	hypothetical protein	A0A0F6WEJ2	Mycobacterium_phage	3.2e-12	42.6
WP_087074231.1\|1235254_1235659_+	hypothetical protein	G8I4M9	Mycobacterium_phage	5.6e-53	78.4
WP_157680144.1\|1235696_1236248_+	hypothetical protein	G8I4N0	Mycobacterium_phage	3.5e-45	74.6
1240102:1240119	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1241666 : 1260116

Mycobacterium_phage(76.47%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087074235.1\|1241666_1243157_+	hypothetical protein	G8I4N2	Mycobacterium_phage	3.2e-202	67.3
WP_087074237.1\|1243161_1244211_+	hypothetical protein	G8I4N3	Mycobacterium_phage	1.6e-131	67.0
WP_087074240.1\|1244207_1246259_+	hypothetical protein	T2A8U9	Mycobacterium_phage	9.5e-72	46.1
WP_087074242.1\|1246258_1246816_+	hypothetical protein	A0A097EYK8	Mycobacterium_phage	2.4e-09	29.6
WP_157680145.1\|1246812_1247076_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_087074246.1\|1247224_1248721_+	hypothetical protein	G8I8G5	Mycobacterium_virus	4.1e-24	71.1
WP_087074248.1\|1248750_1249143_+	hypothetical protein	S5XYI1	Mycobacterium_phage	7.9e-60	93.0
WP_087074250.1\|1249152_1249584_+	hypothetical protein	G8I8G7	Mycobacterium_virus	8.1e-58	81.6
WP_087074252.1\|1249714_1250356_+	hypothetical protein	G8I4N9	Mycobacterium_phage	4.3e-95	72.9
WP_087074254.1\|1250453_1251053_+	hypothetical protein	G8I4P0	Mycobacterium_phage	4.0e-79	68.3
WP_087074256.1\|1251049_1252360_+	hypothetical protein	G8I4P1	Mycobacterium_phage	1.5e-163	66.8
WP_087081686.1\|1252763_1253057_+	hypothetical protein	G8I4P2	Mycobacterium_phage	4.4e-15	49.5
WP_087074258.1\|1253085_1253496_+	hypothetical protein	A0A2P1JRG0	Mycobacterium_phage	2.0e-05	56.8
WP_087074260.1\|1253495_1254203_+	hypothetical protein	G8I4P4	Mycobacterium_phage	2.7e-66	61.1
WP_157680146.1\|1254236_1254572_+	hypothetical protein	NA	NA	NA	NA
WP_087081688.1\|1255729_1256110_+	hypothetical protein	NA	NA	NA	NA
WP_087074264.1\|1256112_1256505_+	DUF3307 domain-containing protein	A0A159B6H1	Gordonia_phage	1.1e-50	73.1
WP_087074266.1\|1256501_1257389_+	hypothetical protein	A0A222ZKT0	Mycobacterium_phage	8.1e-20	30.4
WP_087074268.1\|1257492_1257681_-	hypothetical protein	NA	NA	NA	NA
WP_087074270.1\|1257692_1257989_-	hypothetical protein	G8I4Q1	Mycobacterium_phage	8.7e-27	60.6
WP_087074272.1\|1258409_1258838_+	hypothetical protein	NA	NA	NA	NA
WP_087074273.1\|1259282_1260116_-	mycofactocin-coupled SDR family oxidoreductase	W8CYX9	Bacillus_phage	7.7e-12	51.9

DBSCAN-SWA_5

2343625 : 2358611

Mycobacterium_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157680188.1\|2343625_2343895_+	hypothetical protein	R9RWC3	Mycobacterium_phage	9.6e-25	68.1
WP_087072533.1\|2343905_2344205_-	hypothetical protein	NA	NA	NA	NA
WP_157680189.1\|2346518_2346704_+	DUF2384 domain-containing protein	G1D2Z8	Mycobacterium_virus	2.9e-20	75.4
WP_157680190.1\|2346721_2346988_+	hypothetical protein	A0A142F2I5	Mycobacterium_phage	4.0e-07	38.8
WP_157680191.1\|2347109_2347847_+	hypothetical protein	A0A166Y055	Gordonia_phage	2.3e-20	33.9
WP_087075896.1\|2347843_2348176_+	hypothetical protein	NA	NA	NA	NA
WP_087075898.1\|2348172_2348637_+	hypothetical protein	A0A0A0RKZ0	Mycobacterium_phage	6.7e-66	79.9
WP_087075900.1\|2348633_2349644_+	hypothetical protein	A0A2P1JR90	Mycobacterium_phage	2.5e-158	82.7
WP_087075905.1\|2350145_2350478_+	hypothetical protein	G8I5C7	Mycobacterium_virus	1.4e-12	38.8
WP_157680192.1\|2350704_2350947_+	hypothetical protein	G8I4S7	Mycobacterium_phage	9.9e-21	70.3
WP_087075909.1\|2350943_2352485_+	DNA cytosine methyltransferase	B5U5L6	Mycobacterium_virus	1.5e-101	47.1
WP_087081953.1\|2352729_2354061_+	helicase	A0A1P8DU77	Mycobacterium_phage	4.0e-172	67.1
WP_087075911.1\|2354057_2355017_+	site-specific DNA-methyltransferase	A0A220NS70	Mycobacterium_phage	9.4e-147	75.9
WP_087075913.1\|2355013_2355478_+	hypothetical protein	A0A1B3AZZ8	Gordonia_phage	1.3e-21	56.8
WP_157680193.1\|2355556_2355856_+	hypothetical protein	A0A291LB26	Caulobacter_phage	3.1e-08	58.5
WP_087075917.1\|2355852_2356893_+	hypothetical protein	A0A0F6WEV9	Mycobacterium_phage	3.2e-31	43.5
WP_087075919.1\|2357228_2357579_+	hypothetical protein	A0A2R4AQD9	Mycobacterium_phage	1.7e-42	72.1
WP_157680194.1\|2357575_2357920_+	hypothetical protein	A0A0K2FP98	Mycobacterium_phage	1.6e-32	59.8
WP_087075923.1\|2357916_2358267_+	hypothetical protein	A0A097EYQ5	Mycobacterium_phage	5.1e-10	42.4
WP_087075925.1\|2358266_2358611_+	DUF4326 domain-containing protein	A0A142K7I9	Mycobacterium_phage	2.1e-24	50.8

DBSCAN-SWA_6

2362389 : 2397633

Mycobacterium_phage(61.29%)

portal,capsid,protease,head,integrase

attL 2382962:2382977|attR 2404940:2404955

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087075938.1\|2362389_2362605_+	hypothetical protein	A0A0S1S0Y5	Mycobacterium_phage	7.0e-18	59.2
WP_087081955.1\|2363030_2363591_+	hypothetical protein	A0A088F7V2	Mycobacterium_phage	3.2e-54	56.3
WP_087081957.1\|2363713_2363932_+	helix-turn-helix domain-containing protein	G9FH24	Rhodococcus_phage	4.1e-18	68.1
WP_087075942.1\|2364278_2364692_+	hypothetical protein	A0A2P1JRC7	Mycobacterium_phage	3.8e-28	69.6
WP_087075944.1\|2364691_2364928_+	hypothetical protein	NA	NA	NA	NA
WP_087075946.1\|2365835_2366183_+	hypothetical protein	G9FH26	Rhodococcus_phage	1.4e-23	55.1
WP_087075948.1\|2366211_2367609_+	hypothetical protein	A0A2P1JR29	Mycobacterium_phage	2.1e-115	46.9
WP_087081959.1\|2367637_2367820_+	hypothetical protein	NA	NA	NA	NA
WP_087075950.1\|2367816_2369286_+\|portal	phage portal protein	A0A0A7RVH8	Mycobacterium_phage	4.0e-173	66.7
WP_087075952.1\|2369260_2370205_+\|head,protease	HK97 family phage prohead protease	A0A1B3AYS9	Gordonia_phage	2.6e-56	46.1
WP_087075954.1\|2370207_2371650_+\|capsid	phage major capsid protein	A0A1B3B249	Gordonia_phage	3.0e-112	48.8
WP_087075956.1\|2371714_2371987_+	hypothetical protein	NA	NA	NA	NA
WP_087075958.1\|2371986_2372397_+	hypothetical protein	NA	NA	NA	NA
WP_087075960.1\|2372403_2372961_+	hypothetical protein	A0A0A7RVK3	Mycobacterium_phage	6.0e-53	57.8
WP_087075962.1\|2372957_2373350_+	hypothetical protein	E0YQ10	Mycobacterium_phage	4.8e-49	72.3
WP_087075964.1\|2373349_2373799_+	HK97 gp10 family phage protein	Q854Y8	Mycobacterium_virus	2.1e-56	83.8
WP_087081962.1\|2373858_2374218_+	hypothetical protein	Q854Y7	Mycobacterium_virus	6.8e-42	73.9
WP_087075966.1\|2375465_2375948_+	hypothetical protein	Q854Y5	Mycobacterium_virus	8.8e-61	72.0
WP_087081964.1\|2376009_2376366_+	hypothetical protein	A0A0A7RVJ2	Mycobacterium_phage	5.3e-39	70.5
WP_087075968.1\|2376381_2380260_+	hypothetical protein	G1JX31	Mycobacterium_phage	9.1e-225	44.1
WP_087075970.1\|2380259_2381978_+	hypothetical protein	Q854Y2	Mycobacterium_virus	3.4e-216	64.6
WP_087075972.1\|2382003_2383728_+	hypothetical protein	E0YQ19	Mycobacterium_phage	8.9e-281	79.2
2382962:2382977	attL	NA	NA	NA	NA
WP_087075974.1\|2383737_2384586_+	hypothetical protein	G8I6Q3	Mycobacterium_virus	1.5e-95	61.7
WP_087075976.1\|2384582_2387786_+	hypothetical protein	A0A2P1JR44	Mycobacterium_phage	3.2e-159	43.6
WP_087075979.1\|2387793_2388207_+	hypothetical protein	X2KN63	Mycobacterium_phage	1.6e-23	50.0
WP_087075980.1\|2388206_2389520_+	serine hydrolase	X2KYU1	Mycobacterium_phage	5.2e-124	54.0
WP_157680197.1\|2389528_2389681_+	hypothetical protein	NA	NA	NA	NA
WP_157680428.1\|2389929_2390511_+	hypothetical protein	G3MDN1	Mycobacterium_phage	6.9e-28	40.2
WP_087075982.1\|2390522_2390948_+	hypothetical protein	A0A2P1JR64	Mycobacterium_phage	5.0e-44	70.6
WP_157680198.1\|2390948_2391101_-	hypothetical protein	NA	NA	NA	NA
WP_087075984.1\|2391355_2391661_+	hypothetical protein	NA	NA	NA	NA
WP_087081969.1\|2392182_2392932_+	N-acetylmuramoyl-L-alanine amidase	G8I9P6	Mycobacterium_virus	5.3e-121	80.7
WP_087075986.1\|2392928_2393909_+	PE-PPE domain-containing protein	A0A1D8ET38	Mycobacterium_phage	3.8e-95	64.9
WP_087075988.1\|2394032_2394233_+	hypothetical protein	A0A2D1GD24	Mycobacterium_phage	1.8e-07	45.0
WP_157680199.1\|2394383_2394545_+	hypothetical protein	NA	NA	NA	NA
WP_087075990.1\|2394541_2394835_+	hypothetical protein	M4WNN0	Mycobacterium_phage	6.4e-14	46.7
WP_157680200.1\|2394831_2395044_+	hypothetical protein	A0A2H4PEY6	Gordonia_phage	6.7e-05	42.6
WP_087081971.1\|2395043_2395415_+	hypothetical protein	A0A2K9VEV9	Mycobacterium_phage	5.0e-32	60.2
WP_087081973.1\|2395607_2395910_-	hypothetical protein	NA	NA	NA	NA
WP_087075994.1\|2396466_2397633_+\|integrase	site-specific integrase	G9FH48	Rhodococcus_phage	1.2e-76	40.2
2404940:2404955	attR	NA	NA	NA	NA

DBSCAN-SWA_7

4191188 : 4246841

Mycobacterium_phage(16.67%)

integrase,transposase

attL 4222345:4222360|attR 4243438:4243453

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087078016.1\|4191188_4192595_+\|transposase	IS1380 family transposase	A0A222ZN33	Mycobacterium_phage	7.4e-84	43.7
WP_087082409.1\|4192491_4193256_-	hypothetical protein	G8CLC7	Synechococcus_phage	2.3e-10	36.4
WP_087078017.1\|4193419_4194469_-	hypothetical protein	B8QTQ0	Erwinia_phage	5.6e-20	28.3
WP_087082411.1\|4194512_4196519_-	hypothetical protein	A0A1I9SAA2	Rhodococcus_phage	1.4e-30	33.2
WP_087078018.1\|4196685_4196997_-	hypothetical protein	NA	NA	NA	NA
WP_087078019.1\|4197237_4197468_+	hypothetical protein	NA	NA	NA	NA
WP_087078020.1\|4197467_4197668_+	hypothetical protein	NA	NA	NA	NA
WP_087078021.1\|4198283_4198472_+	hypothetical protein	NA	NA	NA	NA
WP_087078022.1\|4198571_4199561_+	hypothetical protein	A0A1D8EU84	Propionibacterium_phage	3.3e-14	28.1
WP_087078023.1\|4199586_4201788_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_087078024.1\|4202545_4202953_-	hypothetical protein	NA	NA	NA	NA
WP_157680277.1\|4203147_4203975_+	hypothetical protein	NA	NA	NA	NA
WP_087078026.1\|4204037_4204349_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_087078027.1\|4204345_4204747_-	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_087078028.1\|4204859_4206263_+	hypothetical protein	NA	NA	NA	NA
WP_087078029.1\|4206345_4206783_+	hypothetical protein	NA	NA	NA	NA
WP_157680278.1\|4206812_4206962_-	hypothetical protein	NA	NA	NA	NA
WP_157680279.1\|4206989_4207199_-	hypothetical protein	NA	NA	NA	NA
WP_087078030.1\|4207444_4207786_+	hypothetical protein	NA	NA	NA	NA
WP_087078031.1\|4207815_4208412_+	hypothetical protein	NA	NA	NA	NA
WP_087078032.1\|4208451_4208790_+	hypothetical protein	NA	NA	NA	NA
WP_087078033.1\|4208791_4209730_+	hypothetical protein	NA	NA	NA	NA
WP_087082414.1\|4209849_4211925_+	hypothetical protein	NA	NA	NA	NA
WP_087078034.1\|4211921_4212104_+	hypothetical protein	NA	NA	NA	NA
WP_047036684.1\|4212304_4212610_+	hypothetical protein	NA	NA	NA	NA
WP_157680280.1\|4212816_4213587_+	hypothetical protein	NA	NA	NA	NA
WP_087078036.1\|4213726_4214956_+	PPE domain-containing protein	NA	NA	NA	NA
WP_087078037.1\|4214964_4215381_-	hypothetical protein	NA	NA	NA	NA
WP_087072533.1\|4215455_4215755_-	hypothetical protein	NA	NA	NA	NA
WP_087072468.1\|4215744_4216533_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	5.5e-44	42.8
WP_087078038.1\|4218034_4219174_-	hypothetical protein	NA	NA	NA	NA
WP_019346742.1\|4219324_4219678_+	hypothetical protein	NA	NA	NA	NA
WP_087078039.1\|4219727_4221992_+	hypothetical protein	NA	NA	NA	NA
WP_087078040.1\|4222018_4222984_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
4222345:4222360	attL	NA	NA	NA	NA
WP_157680281.1\|4223008_4223149_-	hypothetical protein	NA	NA	NA	NA
WP_075909311.1\|4223462_4223786_-	hypothetical protein	NA	NA	NA	NA
WP_157680282.1\|4223834_4224080_-	hypothetical protein	NA	NA	NA	NA
WP_047036696.1\|4224680_4227668_+	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_131721850.1\|4227702_4228092_+	hypothetical protein	NA	NA	NA	NA
WP_131721851.1\|4228145_4228460_+	hypothetical protein	NA	NA	NA	NA
WP_087078041.1\|4228539_4228821_+	hypothetical protein	NA	NA	NA	NA
WP_131721852.1\|4228857_4229118_+	hypothetical protein	NA	NA	NA	NA
WP_052773199.1\|4229483_4230371_-	hypothetical protein	NA	NA	NA	NA
WP_047036854.1\|4230367_4230796_-	hypothetical protein	NA	NA	NA	NA
WP_047036857.1\|4230852_4231416_+	hypothetical protein	NA	NA	NA	NA
WP_087082416.1\|4231433_4231715_+	hypothetical protein	NA	NA	NA	NA
WP_047036707.1\|4231751_4231985_+	hypothetical protein	NA	NA	NA	NA
WP_131721853.1\|4232271_4233720_+	hypothetical protein	NA	NA	NA	NA
WP_019346161.1\|4234050_4234272_+	hypothetical protein	NA	NA	NA	NA
WP_157680283.1\|4234415_4234688_+	hypothetical protein	NA	NA	NA	NA
WP_087078043.1\|4234778_4235477_+	hypothetical protein	NA	NA	NA	NA
WP_157680284.1\|4235602_4236862_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_087078044.1\|4236689_4237877_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_087078045.1\|4240501_4241473_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_087078046.1\|4242075_4242903_+	AAA family ATPase	NA	NA	NA	NA
WP_157680285.1\|4242928_4243165_-	hypothetical protein	NA	NA	NA	NA
WP_087081467.1\|4244447_4245500_+\|transposase	IS110 family transposase	NA	NA	NA	NA
4243438:4243453	attR	NA	NA	NA	NA
WP_087082418.1\|4245713_4245956_-	hypothetical protein	NA	NA	NA	NA
WP_087078048.1\|4246451_4246841_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_8

4295252 : 4301591

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087078091.1\|4295252_4295699_-	hypothetical protein	A0A2P1JXE0	Rhodococcus_phage	1.4e-44	55.9
WP_157680287.1\|4295695_4295872_-	hypothetical protein	NA	NA	NA	NA
WP_087078092.1\|4295864_4296089_-	hypothetical protein	NA	NA	NA	NA
WP_087078093.1\|4296342_4296615_-	hypothetical protein	M9MUA3	Rhodococcus_phage	2.9e-13	41.1
WP_087078094.1\|4296618_4296906_-	hypothetical protein	NA	NA	NA	NA
WP_157680288.1\|4297329_4297506_-	hypothetical protein	A0A222YVC2	Mycobacterium_phage	2.0e-07	47.4
WP_087078095.1\|4297597_4298443_-	DUF4343 domain-containing protein	NA	NA	NA	NA
WP_087078096.1\|4298560_4298989_-	hypothetical protein	A0A088FU57	Mycobacterium_phage	1.1e-30	47.8
WP_087078098.1\|4300110_4300356_-	hypothetical protein	NA	NA	NA	NA
WP_131721857.1\|4300352_4300676_-	hypothetical protein	NA	NA	NA	NA
WP_087078099.1\|4300708_4301221_-	ribonuclease HI	J9Q745	Salmonella_phage	3.8e-38	51.5
WP_019346176.1\|4301342_4301591_-	hypothetical protein	A0A173G9X5	Mycobacterium_phage	1.3e-15	50.6

DBSCAN-SWA_9

4915992 : 4923798

Lactococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087078582.1\|4915992_4918161_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	3.3e-208	51.3
WP_087078583.1\|4918127_4918571_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA
WP_029367354.1\|4918609_4918849_-	redoxin NrdH	V5UN81	Mycobacterium_phage	3.4e-21	65.3
WP_087082572.1\|4919455_4919998_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	2.6e-08	34.7
WP_087078584.1\|4920087_4920696_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_087078585.1\|4920700_4921765_+	DNA polymerase IV	A0A218MNF2	uncultured_virus	3.1e-18	30.8
WP_087078586.1\|4921774_4922947_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	1.3e-62	40.1
WP_087082574.1\|4922943_4923798_-	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.2e-06	34.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP020811

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP020809

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection