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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP020881 Bacillus horikoshii strain 20a plasmid unnamed1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP020880 Bacillus horikoshii strain 20a chromosome, complete genome 8 crisprs RT,csa3,DinG,cas3,DEDDh 1 2 3 0

Results visualization

1. NZ_CP020880
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020880_1 226446-226631 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020880_2 851090-851165 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020880_3 882966-883044 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020880_4 984324-984428 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020880_5 1064089-1064163 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020880_6 1348289-1348363 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020880_7 2383913-2383990 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020880_8 2419160-2419608 Orphan NA
8 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP020880_7 7.1|2383939|26|NZ_CP020880|CRISPRCasFinder 2383939-2383964 26 NZ_CP020880.1 3480513-3480538 0 1.0
NZ_CP020880_7 7.1|2383939|26|NZ_CP020880|CRISPRCasFinder 2383939-2383964 26 NZ_CP020880.1 2385601-2385626 1 0.962
NZ_CP020880_7 7.1|2383939|26|NZ_CP020880|CRISPRCasFinder 2383939-2383964 26 NZ_CP020880.1 2385653-2385678 1 0.962

1. spacer 7.1|2383939|26|NZ_CP020880|CRISPRCasFinder matches to position: 3480513-3480538, mismatch: 0, identity: 1.0

cgtcactgatgtcttcataacgccgt	CRISPR spacer
cgtcactgatgtcttcataacgccgt	Protospacer
**************************

2. spacer 7.1|2383939|26|NZ_CP020880|CRISPRCasFinder matches to position: 2385601-2385626, mismatch: 1, identity: 0.962

cgtcactgatgtcttcataacgccgt	CRISPR spacer
cgtcactgatgtcttcagaacgccgt	Protospacer
***************** ********

3. spacer 7.1|2383939|26|NZ_CP020880|CRISPRCasFinder matches to position: 2385653-2385678, mismatch: 1, identity: 0.962

cgtcactgatgtcttcataacgccgt	CRISPR spacer
cgtcattgatgtcttcataacgccgt	Protospacer
*****.********************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP020880_5 5.1|1064112|29|NZ_CP020880|CRISPRCasFinder 1064112-1064140 29 KJ019141 Synechococcus phage ACG-2014f isolate Syn7803C10, complete genome 89754-89782 7 0.759
NZ_CP020880_6 6.1|1348312|29|NZ_CP020880|CRISPRCasFinder 1348312-1348340 29 NZ_CP015095 Pelagibaca abyssi strain JLT2014 plasmid pPABY4, complete sequence 61402-61430 8 0.724

1. spacer 5.1|1064112|29|NZ_CP020880|CRISPRCasFinder matches to KJ019141 (Synechococcus phage ACG-2014f isolate Syn7803C10, complete genome) position: , mismatch: 7, identity: 0.759

gggtctcaatgaggacaatgttcgagagt	CRISPR spacer
aaggtacgatgaggacaatgttctagagt	Protospacer
..* . *.*************** *****

2. spacer 6.1|1348312|29|NZ_CP020880|CRISPRCasFinder matches to NZ_CP015095 (Pelagibaca abyssi strain JLT2014 plasmid pPABY4, complete sequence) position: , mismatch: 8, identity: 0.724

gaagctgttcagcgaggtctttacatggt	CRISPR spacer
cgggctgttcagcggggtctttaccccga	Protospacer
 ..***********.********* . * 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 434343 : 444729 9 Synechococcus_phage(37.5%) NA NA
DBSCAN-SWA_2 2552894 : 2562513 12 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 3407311 : 3415279 10 Staphylococcus_phage(50.0%) holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage