CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP021426	Lactobacillus rhamnosus strain 4B15 chromosome, complete genome	2 crisprs	csa3,DEDDh,WYL,DinG,cas3,cas14j,cas9,cas1,cas2,csn2,RT,PrimPol,Cas14u_CAS-V	1	18	8	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021426_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021426_1

481520-481621

Orphan

Consensus_repeat	Method
GGGTAAAACCCTTCCAATCTCCAACTTCATTATACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021426_1

>merge|NZ_CP021426|1|481520-481621|CRISPRCasFinder
GGGTAAAACCCTTCCAATCTCCAACTTCATTATACCGCTCCGTGCGGCTAACGTAGCCATAGCTAAGGGTAAAACCCTTCCAATCTCCAACTTCATTATACC

>NZ_CP021426|1|1|481520-481621|CRISPRCasFinder
GGGTAAAACCCTTCCAATCTCCAACTTCATTATACC	GCTCCGTGCGGCTAACGTAGCCATAGCTAA
GGGTAAAACCCTTCCAATCTCCAACTTCATTATACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021426.1\|WP_005688690.1\|472994_473699_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP021426.1\|WP_005684479.1\|484371_485943_-\|ribonuclease-Y	unknown	unknown	gnl\|CDD\|237177
NZ_CP021426.1\|WP_076638763.1\|480426_480627_-\|acetyltransferase	unknown	unknown	unknown
NZ_CP021426.1\|WP_014569352.1\|487671_488913_-\|competence/damage-inducible-protein-A	unknown	unknown	gnl\|CDD\|234789
NZ_CP021426.1\|WP_014569356.1\|482333_483599_-\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|226583
NZ_CP021426.1\|WP_014569359.1\|474848_474986_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021426.1\|WP_014569351.1\|489133_489724_-\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|273139
NZ_CP021426.1\|WP_005684490.1\|475063_475951_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225088
NZ_CP021426.1\|WP_014569350.1\|490742_491471_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235506
NZ_CP021426.1\|WP_005684485.1\|480907_481465_-\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|224461
NZ_CP021426.1\|WP_014569360.1\|473695_474793_-\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|273938
NZ_CP021426.1\|WP_005684496.1\|470378_471245_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS-family-protein	unknown	unknown	gnl\|CDD\|273991
NZ_CP021426.1\|WP_029943817.1\|483626_484283_+\|YigZ-family-protein	unknown	unknown	gnl\|CDD\|224653
NZ_CP021426.1\|WP_005688187.1\|486567_487620_-\|recombinase-RecA	unknown	unknown	gnl\|CDD\|236476
NZ_CP021426.1\|WP_005684489.1\|475940_476627_-\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|225438
NZ_CP021426.1\|WP_005688681.1\|481656_482175_-\|ComF-family-protein	unknown	unknown	gnl\|CDD\|223970
NZ_CP021426.1\|WP_014569361.1\|471334_473002_-\|signal-transduction-histidine-kinase	unknown	unknown	gnl\|CDD\|274368
NZ_CP021426.1\|WP_005684487.1\|477961_480325_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237260
NZ_CP021426.1\|WP_005688668.1\|489720_490656_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224343
NZ_CP021426.1\|WP_014569349.1\|491470_492763_-\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685

Protein	Function_ID	Function_description	E-value
NZ_CP021426.1\|WP_005688690.1\|472994_473699_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.69015e-95
NZ_CP021426.1\|WP_005688187.1\|486567_487620_-\|recombinase-RecA	gnl\|CDD\|236476	PRK09354, recA, recombinase A; Provisional.	0
NZ_CP021426.1\|WP_014569352.1\|487671_488913_-\|competence/damage-inducible-protein-A	gnl\|CDD\|234789	PRK00549, PRK00549, competence damage-inducible protein A; Provisional.	0
NZ_CP021426.1\|WP_005684479.1\|484371_485943_-\|ribonuclease-Y	gnl\|CDD\|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	0
NZ_CP021426.1\|WP_005684489.1\|475940_476627_-\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	2.31232e-125
NZ_CP021426.1\|WP_014569351.1\|489133_489724_-\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	gnl\|CDD\|273139	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. Alternate names: phosphatidylglycerophosphate synthase; glycerophosphate phosphatidyltransferase; PGP synthase. A number of related enzymes are quite similar in both sequence and catalytic activity, including Saccharamyces cerevisiae YDL142c, now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. [Fatty acid and phospholipid metabolism, Biosynthesis].	2.71207e-42
NZ_CP021426.1\|WP_029943817.1\|483626_484283_+\|YigZ-family-protein	gnl\|CDD\|224653	COG1739, COG1739, Uncharacterized conserved protein [Function unknown].	4.23849e-64
NZ_CP021426.1\|WP_014569350.1\|490742_491471_-\|SDR-family-oxidoreductase	gnl\|CDD\|235506	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional.	3.75019e-52
NZ_CP021426.1\|WP_005684485.1\|480907_481465_-\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|224461	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis].	1.40425e-33
NZ_CP021426.1\|WP_014569360.1\|473695_474793_-\|PDZ-domain-containing-protein	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	4.90945e-08
NZ_CP021426.1\|WP_005684496.1\|470378_471245_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS-family-protein	gnl\|CDD\|273991	TIGR02136, ptsS_2, phosphate binding protein. Members of this family are phosphate-binding proteins. Most are found in phosphate ABC-transporter operons, but some are found in phosphate regulatory operons. This model separates members of the current family from the phosphate ABC transporter phosphate binding protein described by TIGRFAMs model TIGR00975. [Transport and binding proteins, Anions].	1.71825e-97
NZ_CP021426.1\|WP_005684490.1\|475063_475951_-\|ABC-transporter-permease	gnl\|CDD\|225088	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning].	2.60846e-80
NZ_CP021426.1\|WP_014569356.1\|482333_483599_-\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|226583	COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair].	3.8383e-138
NZ_CP021426.1\|WP_005688681.1\|481656_482175_-\|ComF-family-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	3.08514e-22
NZ_CP021426.1\|WP_014569361.1\|471334_473002_-\|signal-transduction-histidine-kinase	gnl\|CDD\|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	2.85674e-74
NZ_CP021426.1\|WP_005684487.1\|477961_480325_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237260	PRK12906, secA, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP021426.1\|WP_005688668.1\|489720_490656_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224343	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown].	1.64969e-33
NZ_CP021426.1\|WP_014569349.1\|491470_492763_-\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	2.72204e-71

>NZ_CP021426.1|WP_005684485.1|480907_481465_-|ribosome-associated-translation-inhibitor-RaiA
MLTYNVRGENIEVTEAIRNYVEKRISKLNKFFGGSVTATAHVNLKVYPDKTAKVEVTIPLSFLTLRAEETSPDLYASIDLVTDKLERQVRKFKTKINRKSREKGFGQIDIDSNAPAEPKPAEDDDNLKVVRTKRVSLKPMDSQEAILQMDMLGHNFFIFEDADTNGTSIVYKRRDGRYGLIETNE
>NZ_CP021426.1|WP_076638763.1|480426_480627_-|acetyltransferase
MAKVWLSRSRTLMFWFMPITRSPAQKPAHKDLGRNDQTRVITPKATYAPVSNRAGSRSPSYFQSPL
>NZ_CP021426.1|WP_005684487.1|477961_480325_-|preprotein-translocase-subunit-SecA
MANILRKWVESDKREIGRLGKIADQVQRYEDEYAALSDDQLKANTQKFKDRLAAGATLDDILPEAFATAREGAKRVLGLFPFRVQIIGGIVLHEGNIAEMKTGEGKTLTATMPVYLNALTGKGVHVVTVNEYLSTRDATEMGELYNWLGLSVGLNLNSKNSDEKREAYNCDITYSTNSELGFDYLRDNMVVYKEQMVQRPLNFAIVDEVDSILIDEARTPLIISGGAEKTTGLYIRADRFVKTLKADTDYKIDWPTKTISLTESGIRKAEKNFGLDNLYDTENTALTHHIDQALRANYIMLKDIDYMVSNGEVLIVDQFTGRAMEGRRYSDGLHQAIEAKEGVQIQDENKTMANITYQNFFRMYTKLAGMTGTAKTEQEEFREIYNMEVISVPTNKPVIRVDSPDVLYPTLDAKFNAVVDDIKKRHKKGQPILVGTVAIESSERLSKQLDDEKIPHTVLNAKNHFKEAEIIMNAGQRGAVTIATNMAGRGTDIKLGPGVTELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGSTQFYLSLEDDLMKRFGSERIKAMLDRFKVADDDQVIQSRMISRQVESAQKRVEGNNYDTRKNTLQYDDVMREQREVIYKQRQQIINEDETLKPVLMAMINRTITRIVQTHTQGDQKDWNLDALYAWITANMADPEKFKRSELDGKSQDELIGLLADMAETNFQHKNKQLGDDAQMLEFEKVVILRVVDSAWTDHIDAMDQLRQSIGLRGYGQMNPLVEYQEEGYRMFEEMIASIDDDVTRLFMKAEIRQNIRR
>NZ_CP021426.1|WP_005684489.1|475940_476627_-|cell-division-ATP-binding-protein-FtsE
MIQMENVTKQYANGVTAIKDLNLKIQDGEFVYVIGPSGAGKSTFVKMLYHELKPSSGSIKIDDFDFSTMKPSQVPFLRRHIGIVFQDFKLLPRLTVYENVAYAMQVIEAPDDKIKDRVLEVLGLVGLEQKLRRFPDELSGGEQQRVSVARAIVNKPKVLIADEPTGNLDPQTSDEIVDILERINANGTTVIMATHNKDIVNERQHRLLEIAGGRLVRDEEGGTYGNEE
>NZ_CP021426.1|WP_005684490.1|475063_475951_-|ABC-transporter-permease
MKSKVFFRHVKDSLRSLRRNGWMSVAAVSAVTVTLLLVGIFMALIFNLHHISQQVENDVQVRVYIDKKTTTKQRDDLKDKLKKLDHVNKVTYRSRQQELDTIIGGYGSQWRMFSGDQNPLSDVFMVKTNSPKATISVSKEAQKLDHVVDASYGGRTAKKLFNSVDVAQKWGLAFTILLLFVAVFLINNTIRITILSRSDEIRIMRLVGATNSYIRWPFLLEGAWTGLFGAVLPIIIVDVGYAIVYRSFTYANGASGYTLYANMPFLFWLDLMLAGIGIVIGALGSVISMRRFLKF
>NZ_CP021426.1|WP_014569359.1|474848_474986_-|hypothetical-protein
MGGFNEWQYDVLNTQAYVENNSYMLIDGTKMAVFRHFLVDEPKTL
>NZ_CP021426.1|WP_014569360.1|473695_474793_-|PDZ-domain-containing-protein
MAVIIALLISPIGAVFWLALGLTILYAVSRTSRERHQYLRAIHPQHSEIAPFFWVGILLGIVISALMLVARLQVSLPALLALSGSTLVGLIFSGWRFSPWWLGLAGLVELLRPTTSQMSADLAVLVGVLWLAQALIARLNRGAQIESPVILQDRRQRQQVAFRLRQFYWVPLFLPVSVDQVAGLPLLSIATDTFVAVGLPLVLGAAFTTQRDRVQPYLRRSWPWFAVAGGGLIVFGLVGRILTMPAMTIALVPVLVSLILGAGLVWQAHQVHLNVTQTNHGVVVIGVVPQTPAAQMDLQPGDRVLTCNHIAVNNAAELYNAIQKEPTYCRLRLQQADGEIRLAETAIFAGAPHELGMILFPEETA
>NZ_CP021426.1|WP_005688690.1|472994_473699_-|response-regulator-transcription-factor
MKKILIVDDEPAILTLLQYNLEAEHYQVETATDGQEALDKVRSEPFDFIILDLMLPSLSGLDVTRKIREEKIQTPIMILTAKDNETDKIVGLELGADDYVTKPFSPREIIARIKAIERRSQSQPQAPLPGNANQITVGQITIDPENYKASKAGHRLQLTPKEFELLVYFAQRVGKTLSRDALLNGVWGFDYPAETRMVDIQVSHLRDKIETDPKHPDYLKTVRGFGYQMEAPHE
>NZ_CP021426.1|WP_014569361.1|471334_473002_-|signal-transduction-histidine-kinase
MNKRILRRVLVISLLSLAGFFVLVTTVNQQIVHQQARDLRRVARTYAASAKDGVDPQALAKSEAAFITVVPDNPKTTRQKVMADALRGNHREPFVTTVNVLGRAEQAYLFRHRGHWVAVSRYKSSVWTTAPEQFWILTLTFAVLIALILAWLFRSEHQYQEAIRVMSHNLDRIRQKKEPEPVILPPQSPFTPVARRINALAAEQTHLREKVAVRQSSFDRLIDNLPLGVMLIDTNKDVILHNHAMSQLLGHQIPQPRHNYLDDVKTYALARMIEHTFRHEKTHHQELTVLATQKSVDASVIPLNQGTSRLQVLVILYDVTYLRQVEKMQLDFVGNVSHELKTPVTAISGFAETLLSGAKNDPATLDKFLKIIFDESKRLTQLINDILTLSRPESNQTVQAQVPLKKLVDDALRNLAKVIKDKQIRVEVAIAPDLQVVTDERKLTQIVRNLLNNAVFYNRLAGHVTITAQVVEGHLSLAVADTGIGIPETEQARIFERFYRVDKARSRHNGGTGLGLAIVSELVKSMDGQVAVSSQVGVGSTFTVTLPVSKRQQQD
>NZ_CP021426.1|WP_005684496.1|470378_471245_-|phosphate-ABC-transporter-substrate-binding-protein-PstS-family-protein
MKKIVTLFSIVFLALLASACGSSHSSKQSGESITAVGSSALQPLVEAAGEQYQTEHLGVFINVQGGGSGTGLSQIQQGAVDIGNSDLFAEEKPGIKANALVDHKVAVVGIAPIVNPKVGVKNVSMTQLQQIFLGQITNWKQLGGKNVPIVLVNRAQGSGTRATFEKWALEGKQPIAAQEQDSTGMVRQIVGSTPGAISYVAFSYVDKTVRSLSVDGVAPTDSNVATNRWHIWSYEHMYTKGRPSGLTKRFLTYMMSPAIQKKLVQKMGYIPMTKMKVVRNASGQISRP
>NZ_CP021426.1|WP_005688681.1|481656_482175_-|ComF-family-protein
MQVAAEPCLDCRKWAKHGPLLNNRALFVYDAKMKAWIYQYKGLGDYRLHVAFQDLIAERLRHAEALVPIPSEAKHYEWRGFDPILGLFGCLPLQNWLQKSATARPQAQKTRRERLKTPQSFRVLVSAKTLNRVRQITLLDDLYTTGRTLYHARDALVAAGFKGTIQAFTLIR
>NZ_CP021426.1|WP_014569356.1|482333_483599_-|DEAD/DEAH-box-helicase-family-protein
MDLAGAQLTQRELARLAVSNISHATVVPALVKDHHQWQCQRCCSRRPVALPDGRIYCSECVALGRLTNADHLYRFEQAHLPVGDGQLTWHGVLTPDQQAASDALQASVAAGREHLIWAVTGAGKTEMLFPTIAQLIQQQKRVAIVSPRIDVIRELAPRFRTAFATTPISVRYGGHFDQTDSDLLLATVHQLLRFYRAFDLIVVDEVDAFPMRGTPMLHQAVRQARRGSIAYLTATPDRQLKQAIRRGRLGVSRLFRRFHGHPLPVPRIQLVNLRHVPHQLPKAVIVWVQQVLATKRVCLLFVPKISWAEQLAGKLRQIGLKAAGVASTDAQRAEKVTAFRQGQLEVLVTTTILERGVTVPRCAVAVLAAADPEFSASALIQIAGRAGRAADSPDDPVVFFSDRYTLAMLAARRQIVMMNGR
>NZ_CP021426.1|WP_029943817.1|483626_484283_+|YigZ-family-protein
MMKPYLTIKESGNYTQIIKKSRFITHLARIHDEDEAKAIIDRISHEHAKANHNVFAYVLGNENQIQRASDNGEPSGTAGPPTLEGLLQHELRDTLAVTTRYFGGIKLGAGGLIRAYAGNVNAAIETIGIVARIKQKAVTFQIPYADLDPLQHFLETHNLTIATIDYGVAVTLTLHLDADQLDKNLALIKDFLHGQFDPQIGTSQYREVPYATSEVHKP
>NZ_CP021426.1|WP_005684479.1|484371_485943_-|ribonuclease-Y
MSSVTLVSITLAAVIALAVGLLIGFALQKKLHQNSLDRATQTAEGIIEAAKKEAATLKKEKLLEAKDENHRYRTQLEDELKDRRAEVQKSEHRLNQREDTLDRRDDTLDRKEQSLADREANLNKRQQQLDEREQAISSEISKQQTELERIAELSHEQARTQILDQTQSELTHERAVMIKESEDEAKEAADKKAKVLIADAIQRSASDIVAETTVTVVNLPNDDMKGRIIGREGRNIRTLETLTGIDLIIDDTPQAVVLSGFDPIRREIARIALEKLIQDGRIHPARIEEMVDKARKEMDDRIREIGEQAIFDVGIHNMHPDLIKILGRLHFRTSYGQNVLDHSIQVAKLAGVMAAELGEDVTLAKRAGLLHDIGKALDHEVDGSHVEIGVELATKYKEPKTVINAIASHHGDVEPTSVISVLVAAADAISAARPGARSESLENYLHRLEKLEAIANSHAGVDHSFAIQAGREVRVIVQPEKLSDDQSVILARDIRNEIEKELEYPGHIKVTVIRETRTVEYAK
>NZ_CP021426.1|WP_005688187.1|486567_487620_-|recombinase-RecA
MAETERQEALATALKKIEKNFGKGAIMRMGDKVETRVSAVSSGSLAIDDALGVGGLPRGRIVEIYGPESSGKTTVALHAVAMVQQHGGTAAYIDAENAMDPKYAAALGVNIDELLLSQPDTGEQGLEIADELVASGAIDILVVDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKLSGAINKTKTIALFINQIREKVGIVFGNPEITPGGRALKFYATVRMEVRRSEQIKNGADIIGNRTKIKVVKNKVAPPFKTAIVDIMYGQGISQSGELVDMAVEKDIIEKAGSWYAYQGERIGQGREHAKSYLETHEELRRTIEKQVRLAYGMSPDHVIDQADIETDTTTSAAS
>NZ_CP021426.1|WP_014569352.1|487671_488913_-|competence/damage-inducible-protein-A
MQAEIIAIGTEILMGQITNTNGAYMAKQLATLGIASYHQQVVGDNAKRLADAISLAEQRSDIVILIGGLGPTPDDLTKQTLAAHLNLPLVEDADAMAKLAARVKQQQRPMTPNNRLQAMYPQGAIVLANRVGLAVGAWVEQRQHAYVLLPGPPKEFVPMVDHELLPRLAKYSGHQEVLESRVMRFFGIGESQLVTDLSDLIANQTNPTLATYIKDHEVTVRVTASGKTQAEAAAKLEPMIGIIMDREGRYFYGYGDDNSLAQELVKALAASDKQISAAESLTAGAFQAALGDVPGVSAYFKGGFVTYALATKAAFLNIDARQLSEHGVVSEFTAKAMAEHARQRAAADIAVSFTGVAGPDKLEGQPAGTVWIGLARLGEKPIAQVYHFPGGRNDVRKRAVMTGMMMVLKRLRE
>NZ_CP021426.1|WP_014569351.1|489133_489724_-|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
MNLPNKLTLIRIFLIPVFTLLLAFNWPAGYLTIAGTKVAMSWFIALIIFIVASLTDFADGQIARRKHLVTNFGKFADPLADKLLVMTAFLFLTAAGQIPAWGTAIILWRELAVTGLRLLLSNEGEVLAAAWPGKIKTNTQMFAIIFLMLNNAWFNNINIPFALILFYVAVFFTIYSGVEYFYKNRGVFADSFGSKQ
>NZ_CP021426.1|WP_005688668.1|489720_490656_-|helix-turn-helix-domain-containing-protein
MDEIGQKLRDARIEKGYTIDDLQQITKIQKRYLIAIEEGHFDALPGDFYVRAFIKQYADTVGLDGDELLTQFQQDIPEPQPQEYAAQSVENKTRATRAEEASPVNRLRRYLPQIAIAAFVIVAIIVIYVVMLFSQSGPKQTIPADSESVAVSSKRSSSKASKSSKTSSSSKSSKSSASSSSKSSEKASKESKKKSDKLDISVAAANGATQAVTLKNLPTSGNKLTLGANGATAWISVIVNGSTTWQGSLTSGNTQEVTLPDNTSTFQVRSGNATATTIELNGKKVDISNGTSVVRTITFTSSTSESEASQE
>NZ_CP021426.1|WP_014569350.1|490742_491471_-|SDR-family-oxidoreductase
MRSALIIGASGDIGQAVAAKLAAAGWSLYLHYFKHEQVVMDQMKAYQAAYPHQDFIPLQYDLTDDRHLDELTNQLFSLDAVIFAAGMTYYHLFKETTVPEMTTLMRVHLLTPMVLLTKVERKLAQSGHGRVIFIGSVYGGTGSAMEVAYSTVKGAQSAFVKAYAQEVASLGITVNVVAPGAVTTKMNTKMFDSDTLAKVQAEIPAARFATPQDISYYVSMLVAKDAAYLTGQTLYVTGGWRM
>NZ_CP021426.1|WP_014569349.1|491470_492763_-|insulinase-family-protein
MKTQYFRDVDETLITTTLPNGLRLQVVPRPAYHKSYAIMTTDYGAIDTRFAPDGKQMVTYPAGIAHFLEHKLFEKEDHDAFDLFGETGASANAFTSATKTSFLFSTTTQFNKNLQILLDFVQAPFFSTESVAKEQGIIGSEIQMYQDDPGWRVYAGLLENLFPNHPAHVDVAGTAASIAQITPEMLYTIHRVFYQPSNMTLVIVGNIDVENVIDFVAANQAQKTFPTRQPIVRGVEADVQTADIIPYRELKMPVSRPKTLVGFKGQVAIPQTAAGWQYQLSIRLLLEVLFGDSSQLYQAWYDRGLIDDSFDFDFTNQRSFSYGLVGGDTDDPQGLSAAIKEVLAHAADQADLNRNRVALIKRASLGKYYAGLNGLNGVANQLSALSFGEASLFDFPQILNRISFEDLEQLIPKLFNTEALTVLTMLPEGK

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Crispr_ID: NZ_CP021426_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021426_2

2122438-2124057

TypeII

Consensus_repeat	Method
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CRISPRCasFinder
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CRT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	PILER-CR

24 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP021426_2

>merge|NZ_CP021426|2|2122438-2124057|CRISPRCasFinder,CRT,PILER-CR
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCAAGAAACGATCCCGAGTTTCTGGATTGCTTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCTCATCAGTATTCATGGAAATATAGGATGCTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCATCATCGAATCTTTGGGGACCTTACCACTTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCGATTGTTTCGGTTGCTTCTGTGATGCCACCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCATGACTGGTTGCCGGTAAGCGATGAGTTCAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCCATACTTGTATGAGCACTTTGACTTGTCAAGTCTCAGGTAGATGTCAGATTAATCAGTTCAAGAGCACCGTTTGTGTTGCATGAATATGATCACTAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCAGGTGCTATGCCGCTTGGCATGACGATTGAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCAATAATATTGTGCCAAAAGGTAGTATTCTAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCTCCAAGGGCATTCCAGATTGCAGAAGCCCCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCGGGTGATGCTGACAAGATCAAGACGGCTGTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCCGCCTTACGGGCGACAGCTAGGCCTATGGGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCAGATCGAGCATTACGGCTTGCAAGACTGCGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCACAGTTGAGAAAAGAAAATACGCATTTAAAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCAAAAACACAAATGGCCGCTGCCACCTTATGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCAAAAAAGCCGCGGAACTTCTCGGGCTAGACGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCCACAGTGCCATTCCACAAACCCGACAGAAAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCCGAGCTTGCGGCCAATATCAAGCTATATGCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCGTGTGATCATCATTACCTCTCTGCCACTAAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCATCGCATACTTCATGATGATTGATGCCAGTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCCTGTGTTCTCACGTGTCAACAATTATTTCAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGCTTGTGGTGCCAAAACGGGTTGTTGTCGAGAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGGTTTCAGCAAATATGACGTCTAACATGCCTCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAATACTTGGAAAAGTTGCTATGCAGTTTGAATAGTCTCAGGTAGATGTCAGATCAAAAAAACTTCAGTG

>NZ_CP021426|2|2|2122438-2123991|CRISPRCasFinder
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AAGAAACGATCCCGAGTTTCTGGATTGCTT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	TCATCAGTATTCATGGAAATATAGGATGCT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	ATCATCGAATCTTTGGGGACCTTACCACTT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	GATTGTTTCGGTTGCTTCTGTGATGCCACC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	ATGACTGGTTGCCGGTAAGCGATGAGTTCA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CATACTTGTATGAGCACTTTGACTTGTCAA
GTCTCAGGTAGATGTCAGATTAATCAGTTCAAGAGC	ACCGTTTGTGTTGCATGAATATGATCACTA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AGGTGCTATGCCGCTTGGCATGACGATTGA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AATAATATTGTGCCAAAAGGTAGTATTCTA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	TCCAAGGGCATTCCAGATTGCAGAAGCCCC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	GGGTGATGCTGACAAGATCAAGACGGCTGT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CGCCTTACGGGCGACAGCTAGGCCTATGGG
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AGATCGAGCATTACGGCTTGCAAGACTGCG
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	ACAGTTGAGAAAAGAAAATACGCATTTAAA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AAAAACACAAATGGCCGCTGCCACCTTATG
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AAAAAAGCCGCGGAACTTCTCGGGCTAGAC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CACAGTGCCATTCCACAAACCCGACAGAAA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CGAGCTTGCGGCCAATATCAAGCTATATGC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	GTGTGATCATCATTACCTCTCTGCCACTAA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	ATCGCATACTTCATGATGATTGATGCCAGT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CTGTGTTCTCACGTGTCAACAATTATTTCA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	TTGTGGTGCCAAAACGGGTTGTTGTCGAGA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGG	TTTCAGCAAATATGACGTCTAACATGCCTC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAT

>NZ_CP021426|2|1|2122438-2124057|CRT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AAGAAACGATCCCGAGTTTCTGGATTGCTT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	TCATCAGTATTCATGGAAATATAGGATGCT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	ATCATCGAATCTTTGGGGACCTTACCACTT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	GATTGTTTCGGTTGCTTCTGTGATGCCACC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	ATGACTGGTTGCCGGTAAGCGATGAGTTCA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CATACTTGTATGAGCACTTTGACTTGTCAA
GTCTCAGGTAGATGTCAGATTAATCAGTTCAAGAGC	ACCGTTTGTGTTGCATGAATATGATCACTA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AGGTGCTATGCCGCTTGGCATGACGATTGA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AATAATATTGTGCCAAAAGGTAGTATTCTA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	TCCAAGGGCATTCCAGATTGCAGAAGCCCC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	GGGTGATGCTGACAAGATCAAGACGGCTGT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CGCCTTACGGGCGACAGCTAGGCCTATGGG
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AGATCGAGCATTACGGCTTGCAAGACTGCG
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	ACAGTTGAGAAAAGAAAATACGCATTTAAA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AAAAACACAAATGGCCGCTGCCACCTTATG
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AAAAAAGCCGCGGAACTTCTCGGGCTAGAC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CACAGTGCCATTCCACAAACCCGACAGAAA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CGAGCTTGCGGCCAATATCAAGCTATATGC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	GTGTGATCATCATTACCTCTCTGCCACTAA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	ATCGCATACTTCATGATGATTGATGCCAGT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CTGTGTTCTCACGTGTCAACAATTATTTCA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	TTGTGGTGCCAAAACGGGTTGTTGTCGAGA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGG	TTTCAGCAAATATGACGTCTAACATGCCTC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAT	ACTTGGAAAAGTTGCTATGCAGTTTGAATA
GTCTCAGGTAGATGTCAGATCAAAAAAACTTCAGTG

>NZ_CP021426|2|1|2122570-2123991|PILER-CR
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	ATCATCGAATCTTTGGGGACCTTACCACTT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	GATTGTTTCGGTTGCTTCTGTGATGCCACC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	ATGACTGGTTGCCGGTAAGCGATGAGTTCA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CATACTTGTATGAGCACTTTGACTTGTCAA
GTCTCAGGTAGATGTCAGATTAATCAGTTCAAGAGC	ACCGTTTGTGTTGCATGAATATGATCACTA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AGGTGCTATGCCGCTTGGCATGACGATTGA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AATAATATTGTGCCAAAAGGTAGTATTCTA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	TCCAAGGGCATTCCAGATTGCAGAAGCCCC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	GGGTGATGCTGACAAGATCAAGACGGCTGT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CGCCTTACGGGCGACAGCTAGGCCTATGGG
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AGATCGAGCATTACGGCTTGCAAGACTGCG
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	ACAGTTGAGAAAAGAAAATACGCATTTAAA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AAAAACACAAATGGCCGCTGCCACCTTATG
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	AAAAAAGCCGCGGAACTTCTCGGGCTAGAC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CACAGTGCCATTCCACAAACCCGACAGAAA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CGAGCTTGCGGCCAATATCAAGCTATATGC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	GTGTGATCATCATTACCTCTCTGCCACTAA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	ATCGCATACTTCATGATGATTGATGCCAGT
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	CTGTGTTCTCACGTGTCAACAATTATTTCA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC	TTGTGGTGCCAAAACGGGTTGTTGTCGAGA
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGG	TTTCAGCAAATATGACGTCTAACATGCCTC
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021426.1\|WP_014569978.1\|2114248_2115976_+\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|227320
NZ_CP021426.1\|WP_014569976.1\|2120551_2121457_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP021426.1\|WP_015765029.1\|2121736_2122417_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
NZ_CP021426.1\|WP_014569972.1\|2124804_2125905_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021426.1\|WP_014569971.1\|2126090_2126516_+\|NusG-domain-II-containing-protein	unknown	unknown	gnl\|CDD\|377759
NZ_CP021426.1\|WP_014569963.1\|2136667_2137534_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP021426.1\|WP_014569968.1\|2131408_2133244_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|273919
NZ_CP021426.1\|WP_014569969.1\|2128414_2130037_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP021426.1\|WP_005684670.1\|2110094_2111519_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
NZ_CP021426.1\|WP_014569965.1\|2135179_2135965_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181585
NZ_CP021426.1\|WP_015765030.1\|2121434_2121740_+\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NZ_CP021426.1\|WP_014569979.1\|2112525_2114268_+\|thiol-reductant-ABC-exporter-subunit-CydD	unknown	unknown	gnl\|CDD\|227321
NZ_CP021426.1\|WP_014569964.1\|2136030_2136675_-\|ABC-2-transporter-permease	unknown	unknown	gnl\|CDD\|379133
NZ_CP021426.1\|WP_005713168.1\|2137523_2137919_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP021426.1\|WP_014569970.1\|2126727_2128422_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|227321
NZ_CP021426.1\|WP_014569977.1\|2116254_2120346_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
NZ_CP021426.1\|WP_014569982.1\|2107439_2108459_-\|adenosine-deaminase	unknown	unknown	gnl\|CDD\|238645
NZ_CP021426.1\|WP_005684687.1\|2130168_2131041_+\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|170086
NZ_CP021426.1\|WP_014569980.1\|2111515_2112529_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|376764
NZ_CP021426.1\|WP_014569981.1\|2108558_2109863_+\|pyrimidine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|274244

Protein	Function_ID	Function_description	E-value
NZ_CP021426.1\|WP_014569978.1\|2114248_2115976_+\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	1.18641e-159
NZ_CP021426.1\|WP_014569976.1\|2120551_2121457_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.44045e-93
NZ_CP021426.1\|WP_015765029.1\|2121736_2122417_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	9.75483e-69
NZ_CP021426.1\|WP_014569971.1\|2126090_2126516_+\|NusG-domain-II-containing-protein	gnl\|CDD\|377759	pfam07009, NusG_II, NusG domain II. This domain is found in some NusG proteins where it forms domain II. However most NusG proteins are missing this domain. In other cases this domain is found in isolation. The function of this domain is unknown.	2.11116e-34
NZ_CP021426.1\|WP_014569963.1\|2136667_2137534_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.08913e-59
NZ_CP021426.1\|WP_014569968.1\|2131408_2133244_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	0
NZ_CP021426.1\|WP_014569969.1\|2128414_2130037_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	3.27333e-94
NZ_CP021426.1\|WP_005684670.1\|2110094_2111519_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	0
NZ_CP021426.1\|WP_014569965.1\|2135179_2135965_+\|SDR-family-oxidoreductase	gnl\|CDD\|181585	PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional.	1.0824e-173
NZ_CP021426.1\|WP_015765030.1\|2121434_2121740_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.60312e-22
NZ_CP021426.1\|WP_014569979.1\|2112525_2114268_+\|thiol-reductant-ABC-exporter-subunit-CydD	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
NZ_CP021426.1\|WP_014569964.1\|2136030_2136675_-\|ABC-2-transporter-permease	gnl\|CDD\|379133	pfam13346, ABC2_membrane_5, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	0.00038148
NZ_CP021426.1\|WP_005713168.1\|2137523_2137919_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	2.42647e-31
NZ_CP021426.1\|WP_014569970.1\|2126727_2128422_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	1.53038e-90
NZ_CP021426.1\|WP_014569977.1\|2116254_2120346_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	8.82172e-119
NZ_CP021426.1\|WP_014569982.1\|2107439_2108459_-\|adenosine-deaminase	gnl\|CDD\|238645	cd01320, ADA, Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.	4.06116e-119
NZ_CP021426.1\|WP_005684687.1\|2130168_2131041_+\|PRD-domain-containing-protein	gnl\|CDD\|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	3.27666e-43
NZ_CP021426.1\|WP_014569980.1\|2111515_2112529_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	1.16785e-90
NZ_CP021426.1\|WP_014569981.1\|2108558_2109863_+\|pyrimidine-nucleoside-phosphorylase	gnl\|CDD\|274244	TIGR02644, Thymidine_phosphorylase, pyrimidine-nucleoside phosphorylase. In general, members of this protein family are designated pyrimidine-nucleoside phosphorylase, enzyme family EC 2.4.2.2, as in Bacillus subtilis, and more narrowly as the enzyme family EC 2.4.2.4, thymidine phosphorylase (alternate name: pyrimidine phosphorylase), as in Escherichia coli. The set of proteins encompassed by this model is designated subfamily rather than equivalog for this reason; the protein name from this model should be used when TIGR02643 does not score above trusted cutoff. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0

>NZ_CP021426.1|WP_015765029.1|2121736_2122417_+|type-II-A-CRISPR-associated-protein-Csn2
MNLAYYPFQLITTKPSVITVIDTGLPKVLLDLVQAFRNDDDGIVLSNEQMQIQELRKASLWIGDPVLELDLDKLFQRLIIKKVSQLIEDRRLIELIEQSQRLAMSLLREPLLSELPVTVEPGGKLEQIMKYCNVHFDEEVLTEPFSKVEAAIKTLAKLEEKRLVIFTNISHYLDVDSLNKLLDQVKETSLELLLIEFSDVERRKFFERCQYIYIDKDFMDSRELID
>NZ_CP021426.1|WP_015765030.1|2121434_2121740_+|CRISPR-associated-endonuclease-Cas2
MRLMIMFDLPVATSKDRRNYRRFRRALIDEGFLMIQYSVYVRVCKTKKSAAYMEQRIATVKPPTGIVQTLMVTEAQYQSMHFMVGTEKQDIRNSADRTVMI
>NZ_CP021426.1|WP_014569976.1|2120551_2121457_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRSFIITQHCKVTTKQHSLVVQTNGEVYTMPIDDLNQVIFTTTRALISADAIAALADANAKVIFSGRDGQPVTETKNLYSDRRRAEQVRLQVNWPLDLIETVWTKIVAAKISNQAQVAKLCGHDAQGLLDDLDALEINDVSNREASAARRYFKLMFGDDFSRSDICATNAALNYGYSVLLSTTNRAIVSTGHLTEVGLHHHSASNPYNLGSDLMEPFRPAVDYWVAQHRIKELTPDVKYGLIDLLNLEITFNGKKALLQNAVADHVENCLAFLDGKAKVCRIEVKFPDEVSSHAINDHV
>NZ_CP021426.1|WP_014569977.1|2116254_2120346_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MTKLNQPYGIGLDIGSNSIGFAVVDANSHLLRLKGETAIGARLFREGQSAADRRGSRTTRRRLSRTRWRLSFLRDFFAPHITKIDPDFFLRQKYSEISPKDKDRFKYEKRLFNDRTDAEFYEDYPSMYHLRLHLMTHTHKADPREIFLAIHHILKSRGHFLTPGAAKDFNTDKVDLEDIFPALTEAYAQVYPDLELTFDLAKADDFKAKLLDEQATPSDTQKALVNLLLSSDGEKEIVKKRKQVLTEFAKAITGLKTKFNLALGTEVDEADASNWQFSMGQLDDKWSNIETSMTDQGTEIFEQIQELYRARLLNGIVPAGMSLSQAKVADYGQHKEDLELFKTYLKKLNDHELAKTIRGLYDRYINGDDAKPFLREDFVKALTKEVTAHPNEVSEQLLNRMGQANFMLKQRTKANGAIPIQLQQRELDQIIANQSKYYDWLAAPNPVEAHRWKMPYQLDELLNFHIPYYVGPLITPKQQAESGENVFAWMVRKDPSGNITPYNFDEKVDREASANTFIQRMKTTDTYLIGEDVLPKQSLLYQKYEVLNELNNVRINNECLGTDQKQRLIREVFERHSSVTIKQVADNLVAHGDFARRPEIRGLADEKRFLSSLSTYHQLKEILHEAIDDPTKLLDIENIITWSTVFEDHTIFETKLAEIEWLDPKKINELSGIRYRGWGQFSRKLLDGLKLGNGHTVIQELMLSNHNLMQILADETLKETMTELNQDKLKTDDIEDVINDAYTSPSNKKALRQVLRVVEDIKHAANGQDPSWLFIETADGTGTAGKRTQSRQKQIQTVYANAAQELIDSAVRGELEDKIADKASFTDRLVLYFMQGGRDIYTGAPLNIDQLSHYDIDHILPQSLIKDDSLDNRVLVNATINREKNNVFASTLFAGKMKATWRKWHEAGLISGRKLRNLMLRPDEIDKFAKGFVARQLVETRQIIKLTEQIAAAQYPNTKIIAVKAGLSHQLREELDFPKNRDVNHYHHAFDAFLAARIGTYLLKRYPKLAPFFTYGEFAKVDVKKFREFNFIGALTHAKKNIIAKDTGEIVWDKERDIRELDRIYNFKRMLITHEVYFETADLFKQTIYAAKDSKERGGSKQLIPKKQGYPTQVYGGYTQESGSYNALVRVAEADTTAYQVIKISAQNASKIASANLKSREKGKQLLNEIVVKQLAKRRKNWKPSANSFKIVIPRFGMGTLFQNAKYGLFMVNSDTYYRNYQELWLSRENQKLLKKLFSIKYEKTQMNHDALQVYKAIIDQVEKFFKLYDINQFRAKLSDAIERFEKLPINTDGNKIGKTETLRQILIGLQANGTRSNVKNLGIKTDLGLLQVGSGIKLDKDTQIVYQSPSGLFKRRIPLADL
>NZ_CP021426.1|WP_014569978.1|2114248_2115976_+|thiol-reductant-ABC-exporter-subunit-CydC
MHWLKNEHWIRPDLKRYRWLLFWSLILGIMTFVFAGALMFTSGFLIDKSATKPLFAAIYVTVVLTRAFGVGRPVFQYAERLTSHNWVLRITSHMRRKLYKVLETDAAFVSEHHQTGDILGLLADDIGHIQNLYLRMIFPTVVGAGLTVIATLLLGWFNWGFALWILLLLLFQILILPWWGLVVERFRKAEQKRLNHDAYVSLTDSVLGLSDWVITHRDQDFMKQSLAAPKKLAASTAKSKRFQWGRDFIGQLLFALIAVSMLIWTNLEWTGNQSMANWVGAFVLVVFPLDQAFSGIAQGVGEWPTYRDAIRHLNDLHPVTRELPQQQSVPTTFNKIELNDVSFRYTPSDPELITNIDLTIQAGEKIAILGPSGMGKTTLLQLVLGDLTPTNGHVLIDGQDVLDYQNHRTNLFAVLDQSPFLFNTSIVNNVRLGNEDAGDETVAAALKAVKLDQLVAQLPNGMNSSVEEAGFGFSGGERQRLSLARILLQDAPIVLLDEPTVGLDPITEQALLDTMFTVLKGKTILWVTHHLQGVSQTDRVIFLEDGRLTMNDSPQHLAEQNKRYQNLYALDAGLR
>NZ_CP021426.1|WP_014569979.1|2112525_2114268_+|thiol-reductant-ABC-exporter-subunit-CydD
MIDKTLLRLSGMRKTMTMLAGFALVQAFVILLQGKYLAEGIVHSWNRQSLAGLWLPLGLFAAAFTVRQLIVWVRNRIAAKFAMKSAAWLQAQLLRHLFALGPAAVAKEGTGNLVTMALDGIPEAENYIELILNKILNMSIIPWILVAYIWYENWLTGFTLLIMFPIIILFMVILGLAARDKSESQYAGFQKMSNHFIDSLRGLKTLQLMGISREYANNVYEVSEDYRKQTMGVLRIAMLSTFALDFFTTLSIAVVAVFLGIKLMDGTIPLYPAMVALILAPEYFMPIRDFGTDYHATLNGKNAMTAIWKVIDQPLPTDTHVLPAFKGWQPQDTLSMQHLDFTYADKRAGIQDANLTFTGPEKIAIIGASGSGKSTLLNLIGGFLQPQAADITVRGTKIPHMTQTAWQDHLSYIPQDPYLFADTIAANIRFYRPDASDQAVRDAAESAGLTTWINSLPDGYATRIGEGGRGISGGQAQRIALARTLIDTNRSIWLFDEPTAHLDIETEAALKETLVPLFANRLVIFATHRLHWLNQMDRVIVVDGGKIVAEGTPTELAAHSKPYQALVHEMRGEFNALVEK
>NZ_CP021426.1|WP_014569980.1|2111515_2112529_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MSWLQILWFFLLFVLFSGFFVLEGFDFGVGMSTKLLAHNSDEEDQLVATIGPHWDGNEVWLITAGGAMFASYPMWYASLFSGFYIMFFLVLFGLIVRGVSFEFAAHAETKTGRNIWRWALACGSLIPPFILGMIFTAIIQPLPITKNGDVFPTLGNQINLLTIVGGVAVTLMMLMHGLNFICLKTTGDLRKRARDWNSKLYYLLYAGEVVFAVLLFFMTDFFKERPISTLLILVVIVGSTVAAHIGVLKDNEVLSFIGSALGLVGVVGVIFNGLFPRVMIGQNAAMSILAKDASASPLTLTIMTIVAVILLPIALAYFIWSYVVFHKRIQAKGAVSE
>NZ_CP021426.1|WP_005684670.1|2110094_2111519_+|cytochrome-ubiquinol-oxidase-subunit-I
MLMAMDVLSLARFQFAMTTVFHFFFVPFSIGMGLVAAIMETMYVRKKDETYKKMAKFWGKIFLLSFAVGVVTGIIQEFQFGMNWSNYSRFMGDIFGVPLAIEALLAFFMESTFIGLWMFTWDRFKPAVHAIFIWMTWLGTTLSAIWILSANAFMQHPTGFAISQTTGRVKLVDFGAVITNPQLWVEFPHVIFGAFTTAGFAVAGMAAWRLLKKDHVDFYKKSLKVGLVVGTIASACAIGFGDLQTQFIIKDQPMKFAATEGIYKDTSDPAPWTLVELINTKDHTTSGNIEVPYLLSLLSYHKMNGSVKGMETANKELEAKYGKDKNYYVPVKTLFWSFRVMAGGGVLLFLLGVLGLWFSRKKKDTLLDQRWLLYILGFALWLPFIINTAGWFITELGRYPWVVYGLYTIADAVSPTTTAGQLLFTNICYFLIFTLLGGVMIYYSHRVLKNGPDGDLNTDYGVNSDPFAKEAFAK
>NZ_CP021426.1|WP_014569981.1|2108558_2109863_+|pyrimidine-nucleoside-phosphorylase
MRMVDLITKKRDHGELTDDELTWMIQQYTAEKIPDYQMSAFLMAVYFNGMSAAERDHFAFAMLHSGDVLDLSDIPGIKVDKHSTGGVGDKISIPLAPLVASLGVPVPMISGRGLGHTGGTLDKLESIPGFNVNETEAQFKCQVQTLHQAIVSASRDVAPADRRIYALRDVTGTVESIPLIAGSIMSKKLASGTDALVFDVKVGNGAFMKTSEDARALAKALVSISQSAGVKSVALLTDMNQPLGITIGNSLEIAESIAILKNRGPRDVHDLTVALAAQMLVLGKKAPSLEIATGLAEDALRDGRALNAFKQLIQAQGGDPAVVDDPRKLPQAAYRIPVKAEQSGIVTAIDTNALGVAAMQLGGGRAQKGDKLDLAVGLVLHKKLGTPVTKGDTLVMLHTNDQHVDAIVELVRQAYHIGTTAPKKLPLIHEVIRP
>NZ_CP021426.1|WP_014569982.1|2107439_2108459_-|adenosine-deaminase
MDFATLHTLGKTELHCHLDGSLSLNCIRQLAQKINQPLPADDNALRKLVQAPENSENLADYLKTFDFIAPLLQTKEALQMAAFDVVAQAARENVRYIEIRFAPVLSTAGDLTLSQATEAVIAGLHQAMAQFDIIAKALVCGMRQLPNADNAAMFTANAPLVGDTLVGGDFAGNEADYPTKVCAPAIETAQRLGVPLTFHAGECHCPQNIAEAIRLGIPRIGHATACFDQPELIQTIVKTHTTIELCLTSNLQTKAARSLAEFPYQALKKAGAAITINTDNRTVSNTTLTHEYERYQAYFDTTTADFLTFNLNAVNAAFIPETTKQTLRMRLKQDYAPYL
>NZ_CP021426.1|WP_014569972.1|2124804_2125905_+|hypothetical-protein
MKKVAIIGATLLLSVGLVACSGGSGSSSSKSSSTTSQTSNAKVKIKTGADANAKVPAAGTLMMRQLYAAPHGKQSFAAVNVTLNGDTIVSARINEFQYVKKSSDWTGVPNSNKDFGKNYPSGQILIAKAENSKPYSALMKKEAKATHTWEENETAITNFVKGKKISDLKAAVAEVKGTKKVSDVVSGATFADTAGYLQAIYDAATTGMVAEGIQTTDTNLTEGQVLAAPHGTQSFGIVTVAMQGDKIANVFLDEFQYMPAKDFGAVPNSNTDFGKGIKAGTVLASKRANSDAYSAIMKSKGKATKTWQENSTAIDEFAKGKTVAELETAVSDLKGKKKASDVVSGATFTDTAGYLAAIIKAAKAAK
>NZ_CP021426.1|WP_014569971.1|2126090_2126516_+|NusG-domain-II-containing-protein
MRWLKRYVRPLDYIIVVLLFIACFIPAGIFSLTEANVNTSQKVAVISVNGQVKRRIKLGAHTRHQQFTLYPAKGQYNIIEVEGERIRDKEDNSPDQIAVHTGWISRIGQQSICLPHKLLIEIKPAQGNHGSNGDAGGLVHP
>NZ_CP021426.1|WP_014569970.1|2126727_2128422_+|ATP-binding-cassette-domain-containing-protein
MFGLLKYGRDQRWAGVIEAIFDWLPTLLPILIALNLGTGHQVAALVTTLVLMAVWLGYVVGYELHHRHAWAMSAKRELRDRYFTALYQRNDAVATTAADHAVIQRDLGGLNNLDMFYSTLFPTILQAGMTFLVLIGLSFWYRSWLALLPFGCVFLIGLAMMFLGKRMSAQNKAHLSGFLKMGGRFMDDLRGMTTLVMYDAADRYAQKFADDSEFFRQATMNLLKTQLQTLFVINGFGYLTVFAGGFITAVQLVAGQLPVAGAFATWFTLAMMMVNARQLGYFVHVVKSNGPSLAAILATIAKAKEVPDTVKITDNRPLSQITLDQVNVGYAADAPLVTGINATLVPGKLYGLAGENGTGKSTLIQAILGRLKPLSGAIMADQTAVSALSNVQQAAVFGYVSANEYLFSGTIQENLLLGNRFGDQWQAKLASLGLMQFVPSLEKGYATQVGENGRLLSPGQRQQLAFARMLLADKTVYLLDEITSSIDEANEAIILQAVKKLSRHKIVLFISHDLKAMTQADEVWFIHDHQLTVANHQTLYQKQPAYRQLVDNPEMMENEVNPND
>NZ_CP021426.1|WP_014569969.1|2128414_2130037_+|ABC-transporter-ATP-binding-protein
MIRGLLRYTHHLTGAIFISFLIGMVAELAKVVVLVLAAMMLFDPQNAGQLLLPGLIAIILLGLGSFGEQYSGHYVAFHVLADLRGAVYRQLVKLAPAKLDTQASGKSLKLIGSDIEAMEIFYAHTLVPVAIGLVYGLLVVGIYSQLNWLAAIIALISYVAVGMVVPYARHRQLTAKIQAADRLKAANQQYLLESVRGMAVVRQLGIAKQRMTKGNEGFDQEATAFQQTQFSQLLKNVAATVVIVGGWLLMIWLSGWPQPTTIQQALFAIFPLTFGPLLALNNLPGSLLNGFAAAKNLFKLLQEQPLNAALPNATQTVTTINQIQVDHVAFSYPIRPEAVLKDVTLTLNAGEIVGFVGASGSGKSTLAKLIMGWYPVSHGQILIDGNDLATIKPTALRNQKNYLPQTPVFFSESVRDNLTLHDPAITDQQIWTVLDQVKLRARLEQMSHGLDTVVAASHVPFSSGEQQRLELARALLHPSSVLVLDEPTSNLDTENERLILEAIKTYYHGIVILISHRPESAAFADRVYRFAEHQVVLATE
>NZ_CP021426.1|WP_005684687.1|2130168_2131041_+|PRD-domain-containing-protein
MIIDAILNNNAVVVRRDKRDIIVVERGIGFHAKKGDQLTLQDSMKVYVPEDHAKLKIAMATIASLPDEYLTIAARIIQEAEVQLHTKFNSYLLIELADHIHFAVTRLHEQLILHNKLLWEIQIAYEPAFRMGEWALTEIANQIGEQLPEDEAGFIALKFVSNDLSQQHPVNSVAFTQMLANITKIIFYQLGLNMNAKTPEYQRLVIHLKFFLQRVYATSTAKTPVSPEPYDQALLAHLQQDYTQAYRCMEDVVKFMQQKLPGPISKNEQIYLTLHIARLAKSQGQSLKSS
>NZ_CP021426.1|WP_014569968.1|2131408_2133244_+|PTS-glucose-transporter-subunit-IIA
MGETALAKQLLKLVGGKQNINQVWHCATRLRFTLKDQDKVPKEKVEALDGVITVVEASGQFQVVIGNNVSDVYQEVVKLEPSLSDGTEGPATVTHEKMTFKRAFNGLLTFISGVFTPFLGAMAGAGILKGLLSLAVVLGWLTTKSGAYQIWWAAADGIFYFLPLALAFTAAKQLKVNQFVAMAIAAAMVYPNIVALVGKPSIDFFGIPVVAANYTATVLPILLVVVVQKFLEPFFNRIWHESVRNILAPLCLLVVIVPLTMLVVGPVSSILSNGLATAIVSLNKSVPVLAGMILGGFWQVFVIFGVHWALVPVMMNNIALYGTDPMMPILLPAVLAQAGAAFAVFLKARDAKMKSLAGSSTITALFGITEPTIYGITLKLKKPFYCACVAGAVGGIIVAMSGAGANVAALASILSLPTYLGKGFGVSVIGDVVAFVLGVGLTLAFGGINAPAKKQAAAKVVADHAETLAAPVKGTLVALSDVPDEVFASGTMGQGIAIEPEEDVVKSPVAGTVSLVYPTGHAIGITSDKGAEILIHIGIDTVNLKGKHFKALIEQGQKVTVGTPLVEFDYQAIQAAGYAPTVTMIVTNSDQYQVETRSDGATDDDALMTLA
>NZ_CP021426.1|WP_014569965.1|2135179_2135965_+|SDR-family-oxidoreductase
MYRDLNGKVAVVTGGSKGIGAGIAERFGKEHMAVVINYLGDHEGARKTADTVIKNGGQAVSIHADVSTEAGIASLVKTAESEFGRLDVWVNNAGMEIKAPTHEVSLDDWNKVIAINQTGVFLGARAALNYFLDHHQPGNIINITSVHEQIPWPTFASYTAAKGAVKLFTETIAMEYANRRIRVNAIGPGAIETPINAEKFADKAQYDQTVAMIPQGRLGKPEDVAAGAAWLASTESSYVTGTTLFIDGGMTLYPAFKDGQG
>NZ_CP021426.1|WP_014569964.1|2136030_2136675_-|ABC-2-transporter-permease
MRDLVKLVGLDLAVFHTNSKKYFWFGTLISIVLLLLPFLNGDLATPLAGGITGLSIGLLMMPFVGVDRQGMENLYTMLPVRRTTIVAGHYLFGLMTVGLIDACSMLIIGLGWMARVNPIRDSQAFGWMLCFGTALMLFQIILSFPLMIGLGFKRAPLAAYFPLAILLIAIFLERSFQVDLDALKPWFGVIVAIFISAFIFSWWLSTMLYKKREF
>NZ_CP021426.1|WP_014569963.1|2136667_2137534_-|ABC-transporter-ATP-binding-protein
MTTDLLTVSHLNKHYEDFHLADVSFHLPAGYIMGFIGPNGAGKTTTIKAILDMLQPDSGAINLLGQTTVAARKQVRDQLGVVLDGMVYPDSWQSTAVNRFVGPFFPSWDAVYFKQLCHDFAIPEKTKYRDLSMGTKIKLQLAAALAHHPQLLILDEPTSGLDPIARDELIAILQDFISDDQHSVLISTHSIIELAKVADYVTYLLAGKVTFTGPLSDLLDRYIMIKGGPNELTPGIQATIIGLQQSRVGFSGIWPADQADQLPDSIVQETVDLETLMIAFGKGRRAHA
>NZ_CP021426.1|WP_005713168.1|2137523_2137919_-|GntR-family-transcriptional-regulator
MRIVISNQSGKPIYEQIEDQVKTAILAGQLKANEQLPSIRSLAKDLRISVITTTRAYHELEAAGFITNVQGKGAYVLGQDSALVRENALRDIEASLNQAIDTAKMAKITPAELHTMLDTLLQAEGEADHDN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP021426_2	2.13\|2123266\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123266-2123295	30	NZ_CP021426.1	265059-265088	2	0.933

1. spacer 2.13|2123266|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to position: 265059-265088, mismatch: 2, identity: 0.933

agatcgagcattacggcttgcaagactgcg	CRISPR spacer
agatcgagcactacggcttgcaatactgcg	Protospacer
**********.************ ******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP021426_1	1.1\|481556\|30\|NZ_CP021426\|CRISPRCasFinder	481556-481585	30	AJ251789	Lactobacillus casei bacteriophage A2 complete genome	41533-41562	0	1.0
NZ_CP021426_1	1.1\|481556\|30\|NZ_CP021426\|CRISPRCasFinder	481556-481585	30	NC_004112	Lactobacillus phage A2, complete genome	41533-41562	0	1.0
NZ_CP021426_2	2.1\|2122474\|30\|NZ_CP021426\|CRISPRCasFinder,CRT	2122474-2122503	30	AJ251789	Lactobacillus casei bacteriophage A2 complete genome	6024-6053	0	1.0
NZ_CP021426_2	2.1\|2122474\|30\|NZ_CP021426\|CRISPRCasFinder,CRT	2122474-2122503	30	MH983004	Lactobacillus phage BH1, complete genome	6012-6041	0	1.0
NZ_CP021426_2	2.1\|2122474\|30\|NZ_CP021426\|CRISPRCasFinder,CRT	2122474-2122503	30	NC_004112	Lactobacillus phage A2, complete genome	6024-6053	0	1.0
NZ_CP021426_2	2.3\|2122606\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122606-2122635	30	EU246945	Lactobacillus phage Lrm1, complete sequence	267-296	0	1.0
NZ_CP021426_2	2.3\|2122606\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122606-2122635	30	NC_011104	Lactobacillus phage Lrm1, complete genome	267-296	0	1.0
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	KC171647	Lactobacillus phage PL-1, complete genome	7515-7544	0	1.0
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	NC_022756	Lactobacillus phage J-1, complete genome	7515-7544	0	1.0
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	NZ_LS991422	Lactobacillus casei isolate CECT 9104 plasmid 2	13078-13107	0	1.0
NZ_CP021426_2	2.18\|2123596\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123596-2123625	30	KC171647	Lactobacillus phage PL-1, complete genome	25171-25200	0	1.0
NZ_CP021426_2	2.18\|2123596\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123596-2123625	30	NC_022756	Lactobacillus phage J-1, complete genome	27222-27251	0	1.0
NZ_CP021426_2	2.18\|2123596\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123596-2123625	30	MF999224	Lactobacillus phage LJ, complete genome	922-951	0	1.0
NZ_CP021426_2	2.1\|2122474\|30\|NZ_CP021426\|CRISPRCasFinder,CRT	2122474-2122503	30	NZ_LS991422	Lactobacillus casei isolate CECT 9104 plasmid 2	25882-25911	1	0.967
NZ_CP021426_2	2.3\|2122606\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122606-2122635	30	AJ251789	Lactobacillus casei bacteriophage A2 complete genome	267-296	1	0.967
NZ_CP021426_2	2.3\|2122606\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122606-2122635	30	KC171647	Lactobacillus phage PL-1, complete genome	255-284	1	0.967
NZ_CP021426_2	2.3\|2122606\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122606-2122635	30	NC_022756	Lactobacillus phage J-1, complete genome	255-284	1	0.967
NZ_CP021426_2	2.3\|2122606\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122606-2122635	30	MF999224	Lactobacillus phage LJ, complete genome	16655-16684	1	0.967
NZ_CP021426_2	2.3\|2122606\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122606-2122635	30	MH983004	Lactobacillus phage BH1, complete genome	255-284	1	0.967
NZ_CP021426_2	2.3\|2122606\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122606-2122635	30	NC_004112	Lactobacillus phage A2, complete genome	267-296	1	0.967
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	NZ_LS991422	Lactobacillus casei isolate CECT 9104 plasmid 2	24384-24413	1	0.967
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	EU246945	Lactobacillus phage Lrm1, complete sequence	7314-7343	1	0.967
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	AJ251789	Lactobacillus casei bacteriophage A2 complete genome	7526-7555	1	0.967
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	NC_011104	Lactobacillus phage Lrm1, complete genome	7314-7343	1	0.967
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	MH983004	Lactobacillus phage BH1, complete genome	7515-7544	1	0.967
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	NC_004112	Lactobacillus phage A2, complete genome	7526-7555	1	0.967
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	NC_007501	Lactobacillus phage Lc-Nu, complete genome	34311-34340	1	0.967
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	MN830259	Lactobacillus phage JNU_P10, complete genome	33712-33741	1	0.967
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	NC_005893	Lactobacillus phage phiAT3, complete genome	37765-37794	1	0.967
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	AY131267	Bacteriophage Lc-Nu, complete genome	34311-34340	1	0.967
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	AY605066	Bacteriophage phi AT3, complete sequence	37765-37794	1	0.967
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	KC171647	Lactobacillus phage PL-1, complete genome	35654-35683	1	0.967
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	NC_022756	Lactobacillus phage J-1, complete genome	37705-37734	1	0.967
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	MF999224	Lactobacillus phage LJ, complete genome	13169-13198	1	0.967
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	MH983004	Lactobacillus phage BH1, complete genome	38199-38228	1	0.967
NZ_CP021426_2	2.13\|2123266\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123266-2123295	30	MN830259	Lactobacillus phage JNU_P10, complete genome	30191-30220	1	0.967
NZ_CP021426_2	2.13\|2123266\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123266-2123295	30	AJ251789	Lactobacillus casei bacteriophage A2 complete genome	34319-34348	1	0.967
NZ_CP021426_2	2.13\|2123266\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123266-2123295	30	NC_005893	Lactobacillus phage phiAT3, complete genome	34213-34242	1	0.967
NZ_CP021426_2	2.13\|2123266\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123266-2123295	30	AY605066	Bacteriophage phi AT3, complete sequence	34213-34242	1	0.967
NZ_CP021426_2	2.13\|2123266\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123266-2123295	30	MN830258	Lactobacillus phage JNU_P9, complete genome	39101-39130	1	0.967
NZ_CP021426_2	2.13\|2123266\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123266-2123295	30	NC_004112	Lactobacillus phage A2, complete genome	34319-34348	1	0.967
NZ_CP021426_2	2.19\|2123662\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123662-2123691	30	NC_028835	Lactobacillus phage CL2, complete genome	33156-33185	1	0.967
NZ_CP021426_2	2.19\|2123662\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123662-2123691	30	KR905066	Lactobacillus phage CL1, complete genome	33471-33500	1	0.967
NZ_CP021426_2	2.19\|2123662\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123662-2123691	30	KC171647	Lactobacillus phage PL-1, complete genome	30523-30552	1	0.967
NZ_CP021426_2	2.19\|2123662\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123662-2123691	30	NC_022756	Lactobacillus phage J-1, complete genome	32574-32603	1	0.967
NZ_CP021426_2	2.19\|2123662\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123662-2123691	30	NC_028911	Lactobacillus phage iLp1308, complete genome	30395-30424	1	0.967
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	MF999224	Lactobacillus phage LJ, complete genome	24255-24284	2	0.933
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	AP018361	Lactobacillus phage T25 DNA, complete genome	7970-7999	2	0.933
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	NC_028835	Lactobacillus phage CL2, complete genome	37861-37890	2	0.933
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	KR905066	Lactobacillus phage CL1, complete genome	38046-38075	2	0.933
NZ_CP021426_2	2.19\|2123662\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123662-2123691	30	NZ_LS991422	Lactobacillus casei isolate CECT 9104 plasmid 2	1967-1996	2	0.933
NZ_CP021426_2	2.19\|2123662\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123662-2123691	30	MF999224	Lactobacillus phage LJ, complete genome	6216-6245	2	0.933
NZ_CP021426_1	1.1\|481556\|30\|NZ_CP021426\|CRISPRCasFinder	481556-481585	30	NC_005893	Lactobacillus phage phiAT3, complete genome	38862-38891	3	0.9
NZ_CP021426_1	1.1\|481556\|30\|NZ_CP021426\|CRISPRCasFinder	481556-481585	30	AY605066	Bacteriophage phi AT3, complete sequence	38862-38891	3	0.9
NZ_CP021426_2	2.16\|2123464\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123464-2123493	30	AJ251789	Lactobacillus casei bacteriophage A2 complete genome	41406-41435	3	0.9
NZ_CP021426_2	2.16\|2123464\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123464-2123493	30	NC_004112	Lactobacillus phage A2, complete genome	41406-41435	3	0.9
NZ_CP021426_2	2.21\|2123794\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123794-2123823	30	NC_007501	Lactobacillus phage Lc-Nu, complete genome	21570-21599	3	0.9
NZ_CP021426_2	2.21\|2123794\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123794-2123823	30	AY131267	Bacteriophage Lc-Nu, complete genome	21570-21599	3	0.9
NZ_CP021426_2	2.11\|2123134\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123134-2123163	30	NC_017536	Oligotropha carboxidovorans OM4 plasmid pHCG3B, complete sequence	67602-67631	4	0.867
NZ_CP021426_2	2.11\|2123134\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123134-2123163	30	NC_015689	Oligotropha carboxidovorans OM5 plasmid pHCG3, complete sequence	67604-67633	4	0.867
NZ_CP021426_2	2.16\|2123464\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123464-2123493	30	EU246945	Lactobacillus phage Lrm1, complete sequence	38452-38481	5	0.833
NZ_CP021426_2	2.16\|2123464\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123464-2123493	30	NC_011104	Lactobacillus phage Lrm1, complete genome	38452-38481	5	0.833
NZ_CP021426_2	2.8\|2122936\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122936-2122965	30	NZ_CP029453	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence	323524-323553	6	0.8
NZ_CP021426_2	2.8\|2122936\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122936-2122965	30	NZ_CP023069	Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence	332310-332339	6	0.8
NZ_CP021426_2	2.8\|2122936\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122936-2122965	30	NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	340027-340056	6	0.8
NZ_CP021426_2	2.9\|2123002\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123002-2123031	30	NZ_CP051433	Escherichia sp. SCLE84 plasmid pSCLE3, complete sequence	21078-21107	6	0.8
NZ_CP021426_2	2.9\|2123002\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123002-2123031	30	MK649828	Klebsiella pneumoniae strain 1675479 plasmid p1675479_1, complete sequence	82318-82347	6	0.8
NZ_CP021426_2	2.9\|2123002\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123002-2123031	30	NZ_CP041094	Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH01 plasmid unnamed2, complete sequence	74050-74079	6	0.8
NZ_CP021426_2	2.9\|2123002\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123002-2123031	30	NZ_CP024459	Klebsiella pneumoniae strain QS17-0161 plasmid pMR0617aac, complete sequence	46803-46832	6	0.8
NZ_CP021426_2	2.9\|2123002\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123002-2123031	30	MK649827	Klebsiella pneumoniae strain 1675474 plasmid p1675474_1, complete sequence	168779-168808	6	0.8
NZ_CP021426_2	2.9\|2123002\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123002-2123031	30	MK649829	Klebsiella pneumoniae strain 16114547 plasmid p16114547_1, complete sequence	73116-73145	6	0.8
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	NZ_CP040877	Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence	108064-108093	6	0.8
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	NZ_CP040877	Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence	141927-141956	6	0.8
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	NZ_CP035221	Enterococcus faecium strain SRCM103470 plasmid unnamed1	162511-162540	6	0.8
NZ_CP021426_2	2.16\|2123464\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123464-2123493	30	AP018361	Lactobacillus phage T25 DNA, complete genome	6987-7016	6	0.8
NZ_CP021426_2	2.24\|2123992\|30\|NZ_CP021426\|CRT	2123992-2124021	30	NZ_CP043636	Empedobacter brevis strain SE1-3 plasmid pSE1-3-20kb, complete sequence	19188-19217	6	0.8
NZ_CP021426_2	2.24\|2123992\|30\|NZ_CP021426\|CRT	2123992-2124021	30	NZ_CP043637	Empedobacter brevis strain SE1-3 plasmid pSE1-3-14kb, complete sequence	6538-6567	6	0.8
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	MF417871	Uncultured Caudovirales phage clone 8F_11, partial genome	26940-26969	7	0.767
NZ_CP021426_2	2.7\|2122870\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122870-2122899	30	KT001912	Bacillus phage Silence, complete genome	18237-18266	7	0.767
NZ_CP021426_2	2.11\|2123134\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123134-2123163	30	NZ_CP033968	Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed1, complete sequence	195642-195671	7	0.767
NZ_CP021426_2	2.11\|2123134\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123134-2123163	30	NC_006466	Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence	40454-40483	7	0.767
NZ_CP021426_2	2.11\|2123134\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123134-2123163	30	NC_027348	Delftia phage RG-2014, complete genome	34837-34866	7	0.767
NZ_CP021426_2	2.11\|2123134\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123134-2123163	30	NZ_CP037902	Cupriavidus metallidurans strain BS1 plasmid p1, complete sequence	132507-132536	7	0.767
NZ_CP021426_2	2.11\|2123134\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123134-2123163	30	NZ_CP046332	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2	148537-148566	7	0.767
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	MT939487	Erwinia phage pEa_SNUABM_47, complete genome	171070-171099	7	0.767
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	MN694273	Marine virus AFVG_250M205, complete genome	26416-26445	7	0.767
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	LT960552	Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite	171942-171971	7	0.767
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	MT939486	Erwinia phage pEa_SNUABM_12, complete genome	171810-171839	7	0.767
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	LR596615	Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I	171554-171583	7	0.767
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	NC_041917	Serratia phage BF, complete genome	171782-171811	7	0.767
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	NC_042116	Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite	171554-171583	7	0.767
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	MT939488	Erwinia phage pEa_SNUABM_50, complete genome	170947-170976	7	0.767
NZ_CP021426_2	2.14\|2123332\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123332-2123361	30	MT119361	Enterococus phage vipetofem, complete genome	29325-29354	7	0.767
NZ_CP021426_2	2.20\|2123728\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123728-2123757	30	NZ_CP021468	Komagataeibacter europaeus strain SRCM101446 plasmid pKE1446-1	179727-179756	7	0.767
NZ_CP021426_2	2.20\|2123728\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123728-2123757	30	NZ_CP004365	Komagataeibacter xylinus E25 plasmid pGX5, complete sequence	257299-257328	7	0.767
NZ_CP021426_2	2.20\|2123728\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123728-2123757	30	NC_016037	Komagataeibacter medellinensis NBRC 3288 plasmid pGXY010, complete sequence	107470-107499	7	0.767
NZ_CP021426_2	2.20\|2123728\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123728-2123757	30	NZ_CP041349	Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence	147813-147842	7	0.767
NZ_CP021426_2	2.1\|2122474\|30\|NZ_CP021426\|CRISPRCasFinder,CRT	2122474-2122503	30	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	621244-621273	8	0.733
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	NC_048672	Lentibacter virus vB_LenP_ICBM1, complete genome	29642-29671	8	0.733
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	MF431615	Lentibacter virus vB_LenP_VB3, complete genome	10839-10868	8	0.733
NZ_CP021426_2	2.4\|2122672\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2122672-2122701	30	MF431617	Lentibacter virus vB_LenP_VB1, complete genome	29642-29671	8	0.733
NZ_CP021426_2	2.11\|2123134\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123134-2123163	30	NC_042091	Pseudomonas phage nickie, complete genome	86547-86576	8	0.733
NZ_CP021426_2	2.15\|2123398\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123398-2123427	30	MH622939	Siphoviridae sp. isolate ctbf_3, complete genome	24007-24036	8	0.733
NZ_CP021426_2	2.23\|2123926\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123926-2123955	30	NC_015701	Lactobacillus reuteri SD2112 plasmid pLR584, complete sequence	8539-8568	8	0.733
NZ_CP021426_2	2.1\|2122474\|30\|NZ_CP021426\|CRISPRCasFinder,CRT	2122474-2122503	30	NZ_CP020349	Pasteurella multocida subsp. septica strain CIRMBP-0873 plasmid unnamed2, complete sequence	8543-8572	9	0.7
NZ_CP021426_2	2.13\|2123266\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123266-2123295	30	NC_016571	Pseudomonas phage OBP, complete genome	40739-40768	9	0.7
NZ_CP021426_2	2.16\|2123464\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123464-2123493	30	KX241618	Xanthomonas phage Xoo-sp2, complete genome	24254-24283	9	0.7
NZ_CP021426_2	2.18\|2123596\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123596-2123625	30	NC_009468	Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence	59956-59985	9	0.7
NZ_CP021426_2	2.20\|2123728\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123728-2123757	30	KU686197	Synechococcus phage S-CAM3 isolate 0808SB25, complete genome	71563-71592	9	0.7
NZ_CP021426_2	2.20\|2123728\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123728-2123757	30	KU686199	Synechococcus phage S-CAM3 isolate 1010CC42, complete genome	71549-71578	9	0.7
NZ_CP021426_2	2.20\|2123728\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123728-2123757	30	KU686198	Synechococcus phage S-CAM3 isolate 0910TB04, complete genome	71555-71584	9	0.7

1. spacer 1.1|481556|30|NZ_CP021426|CRISPRCasFinder matches to AJ251789 (Lactobacillus casei bacteriophage A2 complete genome) position: , mismatch: 0, identity: 1.0

gctccgtgcggctaacgtagccatagctaa	CRISPR spacer
gctccgtgcggctaacgtagccatagctaa	Protospacer
******************************

2. spacer 1.1|481556|30|NZ_CP021426|CRISPRCasFinder matches to NC_004112 (Lactobacillus phage A2, complete genome) position: , mismatch: 0, identity: 1.0

gctccgtgcggctaacgtagccatagctaa	CRISPR spacer
gctccgtgcggctaacgtagccatagctaa	Protospacer
******************************

3. spacer 2.1|2122474|30|NZ_CP021426|CRISPRCasFinder,CRT matches to AJ251789 (Lactobacillus casei bacteriophage A2 complete genome) position: , mismatch: 0, identity: 1.0

aagaaacgatcccgagtttctggattgctt	CRISPR spacer
aagaaacgatcccgagtttctggattgctt	Protospacer
******************************

4. spacer 2.1|2122474|30|NZ_CP021426|CRISPRCasFinder,CRT matches to MH983004 (Lactobacillus phage BH1, complete genome) position: , mismatch: 0, identity: 1.0

aagaaacgatcccgagtttctggattgctt	CRISPR spacer
aagaaacgatcccgagtttctggattgctt	Protospacer
******************************

5. spacer 2.1|2122474|30|NZ_CP021426|CRISPRCasFinder,CRT matches to NC_004112 (Lactobacillus phage A2, complete genome) position: , mismatch: 0, identity: 1.0

aagaaacgatcccgagtttctggattgctt	CRISPR spacer
aagaaacgatcccgagtttctggattgctt	Protospacer
******************************

6. spacer 2.3|2122606|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to EU246945 (Lactobacillus phage Lrm1, complete sequence) position: , mismatch: 0, identity: 1.0

atcatcgaatctttggggaccttaccactt	CRISPR spacer
atcatcgaatctttggggaccttaccactt	Protospacer
******************************

7. spacer 2.3|2122606|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_011104 (Lactobacillus phage Lrm1, complete genome) position: , mismatch: 0, identity: 1.0

atcatcgaatctttggggaccttaccactt	CRISPR spacer
atcatcgaatctttggggaccttaccactt	Protospacer
******************************

8. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to KC171647 (Lactobacillus phage PL-1, complete genome) position: , mismatch: 0, identity: 1.0

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
gattgtttcggttgcttctgtgatgccacc	Protospacer
******************************

9. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_022756 (Lactobacillus phage J-1, complete genome) position: , mismatch: 0, identity: 1.0

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
gattgtttcggttgcttctgtgatgccacc	Protospacer
******************************

10. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LS991422 (Lactobacillus casei isolate CECT 9104 plasmid 2) position: , mismatch: 0, identity: 1.0

acagttgagaaaagaaaatacgcatttaaa	CRISPR spacer
acagttgagaaaagaaaatacgcatttaaa	Protospacer
******************************

11. spacer 2.18|2123596|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to KC171647 (Lactobacillus phage PL-1, complete genome) position: , mismatch: 0, identity: 1.0

cgagcttgcggccaatatcaagctatatgc	CRISPR spacer
cgagcttgcggccaatatcaagctatatgc	Protospacer
******************************

12. spacer 2.18|2123596|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_022756 (Lactobacillus phage J-1, complete genome) position: , mismatch: 0, identity: 1.0

cgagcttgcggccaatatcaagctatatgc	CRISPR spacer
cgagcttgcggccaatatcaagctatatgc	Protospacer
******************************

13. spacer 2.18|2123596|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MF999224 (Lactobacillus phage LJ, complete genome) position: , mismatch: 0, identity: 1.0

cgagcttgcggccaatatcaagctatatgc	CRISPR spacer
cgagcttgcggccaatatcaagctatatgc	Protospacer
******************************

14. spacer 2.1|2122474|30|NZ_CP021426|CRISPRCasFinder,CRT matches to NZ_LS991422 (Lactobacillus casei isolate CECT 9104 plasmid 2) position: , mismatch: 1, identity: 0.967

aagaaacgatcccgagtttctggattgctt	CRISPR spacer
aaaaaacgatcccgagtttctggattgctt	Protospacer
**.***************************

15. spacer 2.3|2122606|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to AJ251789 (Lactobacillus casei bacteriophage A2 complete genome) position: , mismatch: 1, identity: 0.967

atcatcgaatctttggggaccttaccactt	CRISPR spacer
attatcgaatctttggggaccttaccactt	Protospacer
**.***************************

16. spacer 2.3|2122606|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to KC171647 (Lactobacillus phage PL-1, complete genome) position: , mismatch: 1, identity: 0.967

atcatcgaatctttggggaccttaccactt	CRISPR spacer
atcatcgagtctttggggaccttaccactt	Protospacer
********.*********************

17. spacer 2.3|2122606|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_022756 (Lactobacillus phage J-1, complete genome) position: , mismatch: 1, identity: 0.967

atcatcgaatctttggggaccttaccactt	CRISPR spacer
atcatcgagtctttggggaccttaccactt	Protospacer
********.*********************

18. spacer 2.3|2122606|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MF999224 (Lactobacillus phage LJ, complete genome) position: , mismatch: 1, identity: 0.967

atcatcgaatctttggggaccttaccactt	CRISPR spacer
atcatcgagtctttggggaccttaccactt	Protospacer
********.*********************

19. spacer 2.3|2122606|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MH983004 (Lactobacillus phage BH1, complete genome) position: , mismatch: 1, identity: 0.967

atcatcgaatctttggggaccttaccactt	CRISPR spacer
attatcgaatctttggggaccttaccactt	Protospacer
**.***************************

20. spacer 2.3|2122606|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_004112 (Lactobacillus phage A2, complete genome) position: , mismatch: 1, identity: 0.967

atcatcgaatctttggggaccttaccactt	CRISPR spacer
attatcgaatctttggggaccttaccactt	Protospacer
**.***************************

21. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LS991422 (Lactobacillus casei isolate CECT 9104 plasmid 2) position: , mismatch: 1, identity: 0.967

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
gattgtttcggttgcttctgtgataccacc	Protospacer
************************.*****

22. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to EU246945 (Lactobacillus phage Lrm1, complete sequence) position: , mismatch: 1, identity: 0.967

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
gattgtttcggttgcttctgtgataccacc	Protospacer
************************.*****

23. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to AJ251789 (Lactobacillus casei bacteriophage A2 complete genome) position: , mismatch: 1, identity: 0.967

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
gattgtttcggttgcttctgtgataccacc	Protospacer
************************.*****

24. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_011104 (Lactobacillus phage Lrm1, complete genome) position: , mismatch: 1, identity: 0.967

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
gattgtttcggttgcttctgtgataccacc	Protospacer
************************.*****

25. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MH983004 (Lactobacillus phage BH1, complete genome) position: , mismatch: 1, identity: 0.967

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
gattgtttcggttgcttctgtgataccacc	Protospacer
************************.*****

26. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_004112 (Lactobacillus phage A2, complete genome) position: , mismatch: 1, identity: 0.967

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
gattgtttcggttgcttctgtgataccacc	Protospacer
************************.*****

27. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_007501 (Lactobacillus phage Lc-Nu, complete genome) position: , mismatch: 1, identity: 0.967

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgttgcatgaatctgatcacta	Protospacer
******************** *********

28. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MN830259 (Lactobacillus phage JNU_P10, complete genome) position: , mismatch: 1, identity: 0.967

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgttgcatgaatctgatcacta	Protospacer
******************** *********

29. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_005893 (Lactobacillus phage phiAT3, complete genome) position: , mismatch: 1, identity: 0.967

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgttgcatgaatctgatcacta	Protospacer
******************** *********

30. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to AY131267 (Bacteriophage Lc-Nu, complete genome) position: , mismatch: 1, identity: 0.967

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgttgcatgaatctgatcacta	Protospacer
******************** *********

31. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to AY605066 (Bacteriophage phi AT3, complete sequence) position: , mismatch: 1, identity: 0.967

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgttgcatgaatctgatcacta	Protospacer
******************** *********

32. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to KC171647 (Lactobacillus phage PL-1, complete genome) position: , mismatch: 1, identity: 0.967

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgttgcatgaatctgatcacta	Protospacer
******************** *********

33. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_022756 (Lactobacillus phage J-1, complete genome) position: , mismatch: 1, identity: 0.967

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgttgcatgaatctgatcacta	Protospacer
******************** *********

34. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MF999224 (Lactobacillus phage LJ, complete genome) position: , mismatch: 1, identity: 0.967

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgttgcatgaatctgatcacta	Protospacer
******************** *********

35. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MH983004 (Lactobacillus phage BH1, complete genome) position: , mismatch: 1, identity: 0.967

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgttgcatgaatctgatcacta	Protospacer
******************** *********

36. spacer 2.13|2123266|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MN830259 (Lactobacillus phage JNU_P10, complete genome) position: , mismatch: 1, identity: 0.967

agatcgagcattacggcttgcaagactgcg	CRISPR spacer
agatcgagcattacggcctgcaagactgcg	Protospacer
*****************.************

37. spacer 2.13|2123266|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to AJ251789 (Lactobacillus casei bacteriophage A2 complete genome) position: , mismatch: 1, identity: 0.967

agatcgagcattacggcttgcaagactgcg	CRISPR spacer
aaatcgagcattacggcttgcaagactgcg	Protospacer
*.****************************

38. spacer 2.13|2123266|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_005893 (Lactobacillus phage phiAT3, complete genome) position: , mismatch: 1, identity: 0.967

agatcgagcattacggcttgcaagactgcg	CRISPR spacer
agatcgagcattacggattgcaagactgcg	Protospacer
**************** *************

39. spacer 2.13|2123266|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to AY605066 (Bacteriophage phi AT3, complete sequence) position: , mismatch: 1, identity: 0.967

agatcgagcattacggcttgcaagactgcg	CRISPR spacer
agatcgagcattacggattgcaagactgcg	Protospacer
**************** *************

40. spacer 2.13|2123266|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MN830258 (Lactobacillus phage JNU_P9, complete genome) position: , mismatch: 1, identity: 0.967

agatcgagcattacggcttgcaagactgcg	CRISPR spacer
agatcgaacattacggcttgcaagactgcg	Protospacer
*******.**********************

41. spacer 2.13|2123266|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_004112 (Lactobacillus phage A2, complete genome) position: , mismatch: 1, identity: 0.967

agatcgagcattacggcttgcaagactgcg	CRISPR spacer
aaatcgagcattacggcttgcaagactgcg	Protospacer
*.****************************

42. spacer 2.19|2123662|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_028835 (Lactobacillus phage CL2, complete genome) position: , mismatch: 1, identity: 0.967

gtgtgatcatcattacctctctgccactaa	CRISPR spacer
gtgtgatcatcattacctctttgccactaa	Protospacer
********************.*********

43. spacer 2.19|2123662|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to KR905066 (Lactobacillus phage CL1, complete genome) position: , mismatch: 1, identity: 0.967

gtgtgatcatcattacctctctgccactaa	CRISPR spacer
gtgtgatcatcattacctctttgccactaa	Protospacer
********************.*********

44. spacer 2.19|2123662|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to KC171647 (Lactobacillus phage PL-1, complete genome) position: , mismatch: 1, identity: 0.967

gtgtgatcatcattacctctctgccactaa	CRISPR spacer
gtgtgatcatcattacctctttgccactaa	Protospacer
********************.*********

45. spacer 2.19|2123662|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_022756 (Lactobacillus phage J-1, complete genome) position: , mismatch: 1, identity: 0.967

gtgtgatcatcattacctctctgccactaa	CRISPR spacer
gtgtgatcatcattacctctttgccactaa	Protospacer
********************.*********

46. spacer 2.19|2123662|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_028911 (Lactobacillus phage iLp1308, complete genome) position: , mismatch: 1, identity: 0.967

gtgtgatcatcattacctctctgccactaa	CRISPR spacer
gtgtgatcatcattacctctttgccactaa	Protospacer
********************.*********

47. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MF999224 (Lactobacillus phage LJ, complete genome) position: , mismatch: 2, identity: 0.933

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
aattgtttcggttgcttccgtgatgccacc	Protospacer
.*****************.***********

48. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to AP018361 (Lactobacillus phage T25 DNA, complete genome) position: , mismatch: 2, identity: 0.933

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgtcgcatgaatctgatcacta	Protospacer
***********.******** *********

49. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_028835 (Lactobacillus phage CL2, complete genome) position: , mismatch: 2, identity: 0.933

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgtcgcatgaatctgatcacta	Protospacer
***********.******** *********

50. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to KR905066 (Lactobacillus phage CL1, complete genome) position: , mismatch: 2, identity: 0.933

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgtcgcatgaatctgatcacta	Protospacer
***********.******** *********

51. spacer 2.19|2123662|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LS991422 (Lactobacillus casei isolate CECT 9104 plasmid 2) position: , mismatch: 2, identity: 0.933

gtgtgatcatcattacctctctgccactaa	CRISPR spacer
gtgtgatcctcattacctctttgccactaa	Protospacer
******** ***********.*********

52. spacer 2.19|2123662|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MF999224 (Lactobacillus phage LJ, complete genome) position: , mismatch: 2, identity: 0.933

gtgtgatcatcattacctctctgccactaa	CRISPR spacer
gtgtgatcctcattacctctttgccactaa	Protospacer
******** ***********.*********

53. spacer 1.1|481556|30|NZ_CP021426|CRISPRCasFinder matches to NC_005893 (Lactobacillus phage phiAT3, complete genome) position: , mismatch: 3, identity: 0.9

gctccgtgcggctaacgtagccatagctaa	CRISPR spacer
gctccgtgcggctaacgtatccataactta	Protospacer
******************* *****.** *

54. spacer 1.1|481556|30|NZ_CP021426|CRISPRCasFinder matches to AY605066 (Bacteriophage phi AT3, complete sequence) position: , mismatch: 3, identity: 0.9

gctccgtgcggctaacgtagccatagctaa	CRISPR spacer
gctccgtgcggctaacgtatccataactta	Protospacer
******************* *****.** *

55. spacer 2.16|2123464|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to AJ251789 (Lactobacillus casei bacteriophage A2 complete genome) position: , mismatch: 3, identity: 0.9

aaaaaagccgcggaacttctcgggctagac	CRISPR spacer
agaaaagccgcggaacttcttggactagac	Protospacer
*.******************.**.******

56. spacer 2.16|2123464|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_004112 (Lactobacillus phage A2, complete genome) position: , mismatch: 3, identity: 0.9

aaaaaagccgcggaacttctcgggctagac	CRISPR spacer
agaaaagccgcggaacttcttggactagac	Protospacer
*.******************.**.******

57. spacer 2.21|2123794|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_007501 (Lactobacillus phage Lc-Nu, complete genome) position: , mismatch: 3, identity: 0.9

ctgtgttctcacgtgtcaacaattatttca	CRISPR spacer
cagtgttcccatgtgtcaacaattatttca	Protospacer
* ******.**.******************

58. spacer 2.21|2123794|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to AY131267 (Bacteriophage Lc-Nu, complete genome) position: , mismatch: 3, identity: 0.9

ctgtgttctcacgtgtcaacaattatttca	CRISPR spacer
cagtgttcccatgtgtcaacaattatttca	Protospacer
* ******.**.******************

59. spacer 2.11|2123134|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_017536 (Oligotropha carboxidovorans OM4 plasmid pHCG3B, complete sequence) position: , mismatch: 4, identity: 0.867

gggtgatgctgacaagatcaagacggctgt-	CRISPR spacer
gggtgatgccgacaagatcaaaa-ggctgcg	Protospacer
*********.***********.* *****.

60. spacer 2.11|2123134|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_015689 (Oligotropha carboxidovorans OM5 plasmid pHCG3, complete sequence) position: , mismatch: 4, identity: 0.867

gggtgatgctgacaagatcaagacggctgt-	CRISPR spacer
gggtgatgccgacaagatcaaaa-ggctgcg	Protospacer
*********.***********.* *****.

61. spacer 2.16|2123464|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to EU246945 (Lactobacillus phage Lrm1, complete sequence) position: , mismatch: 5, identity: 0.833

aaaaaagccgcggaacttctcgggctagac	CRISPR spacer
acaaaagcagcggaactcctcgggctaagc	Protospacer
* ****** ********.*********..*

62. spacer 2.16|2123464|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_011104 (Lactobacillus phage Lrm1, complete genome) position: , mismatch: 5, identity: 0.833

aaaaaagccgcggaacttctcgggctagac	CRISPR spacer
acaaaagcagcggaactcctcgggctaagc	Protospacer
* ****** ********.*********..*

63. spacer 2.8|2122936|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029453 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence) position: , mismatch: 6, identity: 0.8

aggtgctatgccgcttggcatgacgattga	CRISPR spacer
atctgctttgacgcttggcatgacgatcgc	Protospacer
*  **** ** ****************.*

64. spacer 2.8|2122936|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023069 (Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence) position: , mismatch: 6, identity: 0.8

aggtgctatgccgcttggcatgacgattga	CRISPR spacer
atctgctttgacgcttggcatgacgatcgc	Protospacer
*  **** ** ****************.*

65. spacer 2.8|2122936|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029233 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence) position: , mismatch: 6, identity: 0.8

aggtgctatgccgcttggcatgacgattga	CRISPR spacer
atctgctttgacgcttggcatgacgatcgc	Protospacer
*  **** ** ****************.*

66. spacer 2.9|2123002|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051433 (Escherichia sp. SCLE84 plasmid pSCLE3, complete sequence) position: , mismatch: 6, identity: 0.8

aataatattgtgccaaaaggtag-tattcta	CRISPR spacer
gctaaaattgtgccaaaaggtagatgtttt-	Protospacer
. *** ***************** *.**.*

67. spacer 2.9|2123002|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MK649828 (Klebsiella pneumoniae strain 1675479 plasmid p1675479_1, complete sequence) position: , mismatch: 6, identity: 0.8

aataatattgtgccaaaaggtag-tattcta	CRISPR spacer
gctaaaattgtgccaaaaggtagatgtttt-	Protospacer
. *** ***************** *.**.*

68. spacer 2.9|2123002|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041094 (Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH01 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

aataatattgtgccaaaaggtag-tattcta	CRISPR spacer
gctaaaattgtgccaaaaggtagatgtttt-	Protospacer
. *** ***************** *.**.*

69. spacer 2.9|2123002|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024459 (Klebsiella pneumoniae strain QS17-0161 plasmid pMR0617aac, complete sequence) position: , mismatch: 6, identity: 0.8

aataatattgtgccaaaaggtag-tattcta	CRISPR spacer
gctaaaattgtgccaaaaggtagatgtttt-	Protospacer
. *** ***************** *.**.*

70. spacer 2.9|2123002|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MK649827 (Klebsiella pneumoniae strain 1675474 plasmid p1675474_1, complete sequence) position: , mismatch: 6, identity: 0.8

aataatattgtgccaaaaggtag-tattcta	CRISPR spacer
gctaaaattgtgccaaaaggtagatgtttt-	Protospacer
. *** ***************** *.**.*

71. spacer 2.9|2123002|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MK649829 (Klebsiella pneumoniae strain 16114547 plasmid p16114547_1, complete sequence) position: , mismatch: 6, identity: 0.8

aataatattgtgccaaaaggtag-tattcta	CRISPR spacer
gctaaaattgtgccaaaaggtagatgtttt-	Protospacer
. *** ***************** *.**.*

72. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040877 (Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acagttgagaaaagaaaatacgcatttaaa	CRISPR spacer
tgaactgagaaaagaaaatgctcatttaaa	Protospacer
  *..**************.* ********

73. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040877 (Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acagttgagaaaagaaaatacgcatttaaa	CRISPR spacer
tgaactgagaaaagaaaatgctcatttaaa	Protospacer
  *..**************.* ********

74. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035221 (Enterococcus faecium strain SRCM103470 plasmid unnamed1) position: , mismatch: 6, identity: 0.8

acagttgagaaaagaaaatacgcatttaaa	CRISPR spacer
tgaactgagaaaagaaaatgctcatttaaa	Protospacer
  *..**************.* ********

75. spacer 2.16|2123464|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to AP018361 (Lactobacillus phage T25 DNA, complete genome) position: , mismatch: 6, identity: 0.8

aaaaaagccgcggaacttctcgggctagac	CRISPR spacer
gagaaagccgcggaactcctcggactaagc	Protospacer
.*.**************.*****.***..*

76. spacer 2.24|2123992|30|NZ_CP021426|CRT matches to NZ_CP043636 (Empedobacter brevis strain SE1-3 plasmid pSE1-3-20kb, complete sequence) position: , mismatch: 6, identity: 0.8

--acttggaaaagttgctatgcagtttgaata	CRISPR spacer
tgaatt--aaaagttgctatggagtttgaaag	Protospacer
  * **  ************* ******** .

77. spacer 2.24|2123992|30|NZ_CP021426|CRT matches to NZ_CP043637 (Empedobacter brevis strain SE1-3 plasmid pSE1-3-14kb, complete sequence) position: , mismatch: 6, identity: 0.8

--acttggaaaagttgctatgcagtttgaata	CRISPR spacer
tgaatt--aaaagttgctatggagtttgaaag	Protospacer
  * **  ************* ******** .

78. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MF417871 (Uncultured Caudovirales phage clone 8F_11, partial genome) position: , mismatch: 7, identity: 0.767

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
tgttgtttcgcttgcttctgtgctgctaat	Protospacer
 .******** *********** ***.* .

79. spacer 2.7|2122870|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to KT001912 (Bacillus phage Silence, complete genome) position: , mismatch: 7, identity: 0.767

accgtttgtgttgcatgaatatgatcacta	CRISPR spacer
accgtttgtgttgcatgactacctaaacca	Protospacer
****************** **.    **.*

80. spacer 2.11|2123134|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033968 (Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gggtgatgctgacaagatcaagacggctgt	CRISPR spacer
agtcgatgctgacgagatcaggacggcaat	Protospacer
.* .*********.******.****** .*

81. spacer 2.11|2123134|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_006466 (Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence) position: , mismatch: 7, identity: 0.767

gggtgatgctgacaagatcaagacggctgt	CRISPR spacer
agtcgatgctgacgagatcaggacggcaat	Protospacer
.* .*********.******.****** .*

82. spacer 2.11|2123134|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_027348 (Delftia phage RG-2014, complete genome) position: , mismatch: 7, identity: 0.767

gggtgatgctgacaagatcaagacggctgt	CRISPR spacer
gggcctggccgacaagatcaagacggctcg	Protospacer
***.   **.******************

83. spacer 2.11|2123134|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP037902 (Cupriavidus metallidurans strain BS1 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

gggtgatgctgacaagatcaagacggctgt	CRISPR spacer
agtcgatgctgacgagatcaggacggcaat	Protospacer
.* .*********.******.****** .*

84. spacer 2.11|2123134|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046332 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2) position: , mismatch: 7, identity: 0.767

gggtgatgctgacaagatcaagacggctgt	CRISPR spacer
agtcgatgctgacgagatcaggacggcaat	Protospacer
.* .*********.******.****** .*

85. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MT939487 (Erwinia phage pEa_SNUABM_47, complete genome) position: , mismatch: 7, identity: 0.767

--acagttgagaaaagaaaatacgcatttaaa	CRISPR spacer
taccaa--aagaaaagaaattacgcattgaaa	Protospacer
   **.  .********** ******** ***

86. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MN694273 (Marine virus AFVG_250M205, complete genome) position: , mismatch: 7, identity: 0.767

acagttga---gaaaagaaaatacgcatttaaa	CRISPR spacer
---attaaattaaaaagaaaatatgcatttaaa	Protospacer
   .**.*   .***********.*********

87. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to LT960552 (Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite) position: , mismatch: 7, identity: 0.767

--acagttgagaaaagaaaatacgcatttaaa	CRISPR spacer
taccaa--aagaaaagaaattacgcattgaaa	Protospacer
   **.  .********** ******** ***

88. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MT939486 (Erwinia phage pEa_SNUABM_12, complete genome) position: , mismatch: 7, identity: 0.767

--acagttgagaaaagaaaatacgcatttaaa	CRISPR spacer
taccaa--aagaaaagaaattacgcattgaaa	Protospacer
   **.  .********** ******** ***

89. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to LR596615 (Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.767

--acagttgagaaaagaaaatacgcatttaaa	CRISPR spacer
taccaa--aagaaaagaaattacgcattgaaa	Protospacer
   **.  .********** ******** ***

90. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_041917 (Serratia phage BF, complete genome) position: , mismatch: 7, identity: 0.767

--acagttgagaaaagaaaatacgcatttaaa	CRISPR spacer
taccaa--aagaaaagaaattacgcattgaaa	Protospacer
   **.  .********** ******** ***

91. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_042116 (Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite) position: , mismatch: 7, identity: 0.767

--acagttgagaaaagaaaatacgcatttaaa	CRISPR spacer
taccaa--aagaaaagaaattacgcattgaaa	Protospacer
   **.  .********** ******** ***

92. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MT939488 (Erwinia phage pEa_SNUABM_50, complete genome) position: , mismatch: 7, identity: 0.767

--acagttgagaaaagaaaatacgcatttaaa	CRISPR spacer
taccaa--aagaaaagaaattacgcattgaaa	Protospacer
   **.  .********** ******** ***

93. spacer 2.14|2123332|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MT119361 (Enterococus phage vipetofem, complete genome) position: , mismatch: 7, identity: 0.767

acagttgagaaaagaaaatacgcatttaaa	CRISPR spacer
aagccttagaaaagcaaatacgcaattaaa	Protospacer
* . .* ******* ********* *****

94. spacer 2.20|2123728|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021468 (Komagataeibacter europaeus strain SRCM101446 plasmid pKE1446-1) position: , mismatch: 7, identity: 0.767

atcgcatacttcatgatgattgatgccagt	CRISPR spacer
aacaggtacttcatgattattgatgacaga	Protospacer
* *. .*********** ******* ***

95. spacer 2.20|2123728|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004365 (Komagataeibacter xylinus E25 plasmid pGX5, complete sequence) position: , mismatch: 7, identity: 0.767

atcgcatacttcatgatgattgatgccagt	CRISPR spacer
aacaggtacttcatgattattgatgacaga	Protospacer
* *. .*********** ******* ***

96. spacer 2.20|2123728|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_016037 (Komagataeibacter medellinensis NBRC 3288 plasmid pGXY010, complete sequence) position: , mismatch: 7, identity: 0.767

atcgcatacttcatgatgattgatgccagt	CRISPR spacer
aacaggtacttcatgattattgatgacaga	Protospacer
* *. .*********** ******* ***

97. spacer 2.20|2123728|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041349 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence) position: , mismatch: 7, identity: 0.767

atcgcatacttcatgatgattgatgccagt	CRISPR spacer
aacaggtacttcatgattattgatgacaga	Protospacer
* *. .*********** ******* ***

98. spacer 2.1|2122474|30|NZ_CP021426|CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 8, identity: 0.733

aagaaacgatcccgagtttctggattgctt	CRISPR spacer
tctattcgatcccgagcttctggattggtc	Protospacer
   *  **********.********** *.

99. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_048672 (Lentibacter virus vB_LenP_ICBM1, complete genome) position: , mismatch: 8, identity: 0.733

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
gattgtttcggctgcttctgtcttgaggta	Protospacer
***********.*********  **  ..

100. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MF431615 (Lentibacter virus vB_LenP_VB3, complete genome) position: , mismatch: 8, identity: 0.733

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
gattgtttcggctgcttctgtcttgaggta	Protospacer
***********.*********  **  ..

101. spacer 2.4|2122672|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MF431617 (Lentibacter virus vB_LenP_VB1, complete genome) position: , mismatch: 8, identity: 0.733

gattgtttcggttgcttctgtgatgccacc	CRISPR spacer
gattgtttcggctgcttctgtcttgaggta	Protospacer
***********.*********  **  ..

102. spacer 2.11|2123134|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_042091 (Pseudomonas phage nickie, complete genome) position: , mismatch: 8, identity: 0.733

gggtgatgctgacaagatcaagacggctgt	CRISPR spacer
cttagaggctgacaagatcatgacggccat	Protospacer
    ** ************* ******..*

103. spacer 2.15|2123398|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to MH622939 (Siphoviridae sp. isolate ctbf_3, complete genome) position: , mismatch: 8, identity: 0.733

aaaaacacaaatggccgctgccaccttatg	CRISPR spacer
ccgcagacaaggggccgctgccaccttatc	Protospacer
  . * ****. *****************

104. spacer 2.23|2123926|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_015701 (Lactobacillus reuteri SD2112 plasmid pLR584, complete sequence) position: , mismatch: 8, identity: 0.733

tttcagcaaatatgacgtctaacatgcctc	CRISPR spacer
acgtatcaaatatgacgtctaacgtgcgtg	Protospacer
 . .* *****************.*** *

105. spacer 2.1|2122474|30|NZ_CP021426|CRISPRCasFinder,CRT matches to NZ_CP020349 (Pasteurella multocida subsp. septica strain CIRMBP-0873 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

aagaaacgatcccgagtttctggattgctt	CRISPR spacer
ttctttcgatcccgagtttgttgattgcta	Protospacer
      ************* * *******

106. spacer 2.13|2123266|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_016571 (Pseudomonas phage OBP, complete genome) position: , mismatch: 9, identity: 0.7

agatcgagcattacggcttgcaagactgcg	CRISPR spacer
tagtcgagcattacaacttgcaagacgatt	Protospacer
 ..***********..********** ..

107. spacer 2.16|2123464|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to KX241618 (Xanthomonas phage Xoo-sp2, complete genome) position: , mismatch: 9, identity: 0.7

aaaaaagccgcggaacttctcgggctagac	CRISPR spacer
gtagaagccgcggaactgctcgggcacctt	Protospacer
. *.************* *******    .

108. spacer 2.18|2123596|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NC_009468 (Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence) position: , mismatch: 9, identity: 0.7

cgagcttgcggccaatatcaagctatatgc	CRISPR spacer
tcagcttgcggccaatctcaagcgctgcct	Protospacer
. ************** ******  *.. .

109. spacer 2.20|2123728|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to KU686197 (Synechococcus phage S-CAM3 isolate 0808SB25, complete genome) position: , mismatch: 9, identity: 0.7

atcgcatacttcatgatgattgatgccagt	CRISPR spacer
tatgcatacttcatgacaattgatgctgta	Protospacer
  .*************..********..

110. spacer 2.20|2123728|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to KU686199 (Synechococcus phage S-CAM3 isolate 1010CC42, complete genome) position: , mismatch: 9, identity: 0.7

atcgcatacttcatgatgattgatgccagt	CRISPR spacer
tatgcatacttcatgacaattgatgctgta	Protospacer
  .*************..********..

111. spacer 2.20|2123728|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to KU686198 (Synechococcus phage S-CAM3 isolate 0910TB04, complete genome) position: , mismatch: 9, identity: 0.7

atcgcatacttcatgatgattgatgccagt	CRISPR spacer
tatgcatacttcatgacaattgatgctgta	Protospacer
  .*************..********..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

240310 : 280036

Lactobacillus_phage(85.42%)

capsid,tail,head,holin,integrase,portal,terminase

attL 226881:226895|attR 287838:287852

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
226881:226895	attL	NA	NA	NA	NA
WP_014569502.1\|240310_241609_-	LysM peptidoglycan-binding domain-containing protein	B4XYQ9	Lactobacillus_phage	1.2e-232	99.1
WP_014569501.1\|241619_242033_-\|holin	phage holin	A0A0P0IDC6	Lactobacillus_phage	1.4e-43	97.9
WP_014569500.1\|242022_242316_-	hypothetical protein	B4XYQ7	Lactobacillus_phage	5.3e-45	94.8
WP_014569499.1\|242345_242477_-	XkdX family protein	A0A0P0HRS7	Lactobacillus_phage	2.5e-18	97.7
WP_005686996.1\|242469_242793_-	hypothetical protein	B4XYQ6	Lactobacillus_phage	1.1e-51	98.1
WP_014569498.1\|242802_245310_-\|tail	phage tail protein	B4XYQ5	Lactobacillus_phage	0.0e+00	82.6
WP_015764922.1\|245309_247298_-\|tail	phage tail family protein	B4XYQ4	Lactobacillus_phage	0.0e+00	85.9
WP_014569496.1\|247300_250390_-	tape measure protein	A0A0P0IJD2	Lactobacillus_phage	1.4e-263	88.0
WP_015764921.1\|250382_250736_-	hypothetical protein	A0A0P0I7N9	Lactobacillus_phage	5.3e-55	96.6
WP_014569494.1\|250840_251173_-\|tail	tail assembly chaperone	A0A0P0IQQ6	Lactobacillus_phage	2.4e-49	94.5
WP_014569493.1\|251259_251862_-\|tail	phage tail protein	A0A0P0ID88	Lactobacillus_phage	2.4e-100	93.5
WP_014569492.1\|251873_252278_-	DUF3168 domain-containing protein	A0A0P0I3C8	Lactobacillus_phage	3.0e-70	98.5
WP_015764920.1\|252278_252644_-	HK97 gp10 family phage protein	A0A0P0IUZ3	Lactobacillus_phage	2.0e-57	96.7
WP_014569490.1\|252640_252943_-	hypothetical protein	A0A0P0HRN0	Lactobacillus_phage	6.3e-49	93.0
WP_014569489.1\|252947_253322_-\|head,tail	phage head-tail connector protein	A0A0P0IZF6	Lactobacillus_phage	3.2e-58	91.9
WP_014569488.1\|253549_254563_-	hypothetical protein	A0A0A7RVZ1	Clostridium_phage	3.1e-23	26.5
WP_014569487.1\|254578_255235_-	DUF4355 domain-containing protein	A0A0P0ID10	Lactobacillus_phage	4.3e-58	80.0
WP_014569486.1\|255359_256352_-\|capsid	minor capsid protein	A0A0P0ID43	Lactobacillus_phage	6.2e-178	95.5
WP_014569485.1\|256317_257745_-\|portal	phage portal protein	A0A0P0IJV3	Lactobacillus_phage	2.7e-243	90.6
WP_029943635.1\|257749_259105_-\|terminase	PBSX family phage terminase large subunit	A4L7R3	Lactococcus_phage	4.9e-149	59.1
WP_014569483.1\|259082_259616_-\|terminase	terminase small subunit	A0A0P0IUY4	Lactobacillus_phage	2.7e-63	94.1
WP_015764918.1\|259652_259973_-	ribonucleoside-diphosphate reductase	A8YQN5	Lactobacillus_phage	9.0e-54	92.4
WP_014569481.1\|259965_260508_-	HNH endonuclease	B4XYU1	Lactobacillus_phage	1.1e-107	100.0
WP_014569480.1\|260520_261669_-	hypothetical protein	B4XYU0	Lactobacillus_phage	2.4e-221	98.7
WP_005711378.1\|262696_263125_-	hypothetical protein	NA	NA	NA	NA
WP_029943634.1\|263419_263602_-	hypothetical protein	A0A0P0I365	Lactobacillus_phage	1.6e-15	61.7
WP_014569479.1\|263651_263891_-	hypothetical protein	NA	NA	NA	NA
WP_101495024.1\|263887_264253_-	hypothetical protein	C1KFE5	Lactobacillus_virus	3.2e-31	58.0
WP_014569478.1\|264246_264678_-	hypothetical protein	C1KFE8	Lactobacillus_virus	1.1e-49	69.9
WP_029943632.1\|264667_264871_-	hypothetical protein	NA	NA	NA	NA
WP_015764915.1\|264857_265037_-	hypothetical protein	NA	NA	NA	NA
WP_014569477.1\|265026_265533_-	DUF1642 domain-containing protein	Q8LTB6	Lactobacillus_phage	8.6e-59	72.9
WP_014569476.1\|265529_265715_-	hypothetical protein	Q6J1V0	Lactobacillus_phage	5.1e-25	88.5
WP_014569475.1\|265726_266191_-	hypothetical protein	A0A0P0IXF6	Lactobacillus_phage	7.2e-20	98.0
WP_014569474.1\|266203_266605_-	RusA family crossover junction endodeoxyribonuclease	A8YQM5	Lactobacillus_phage	2.6e-50	71.5
WP_014569473.1\|266601_266856_-	hypothetical protein	A0A0P0IQP0	Lactobacillus_phage	4.6e-37	94.0
WP_014569472.1\|266902_267352_-	hypothetical protein	B4XYT0	Lactobacillus_phage	6.2e-69	93.2
WP_015764330.1\|267721_267913_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014569471.1\|267909_268125_-	helix-turn-helix transcriptional regulator	A0A0P0IJY1	Lactobacillus_phage	6.1e-30	91.4
WP_014569470.1\|268142_268628_-	single-stranded DNA-binding protein	U5U726	Lactobacillus_phage	8.8e-61	86.3
WP_014569469.1\|268640_269597_-	DnaD domain protein	A0A1B0Y2R2	Lactobacillus_phage	2.0e-128	90.9
WP_014569468.1\|269612_270377_-	PD-(D/E)XK nuclease-like domain-containing protein	A0A0P0IZH9	Lactobacillus_phage	4.0e-76	54.0
WP_014569467.1\|270396_271272_-	recombinase RecT	A0A1X9I5N6	Streptococcus_phage	5.7e-58	52.2
WP_014569466.1\|271478_271706_-	hypothetical protein	NA	NA	NA	NA
WP_015764912.1\|271849_272080_-	helix-turn-helix domain-containing protein	A0A1B0Y6A3	Lactobacillus_phage	5.5e-37	98.6
WP_014569463.1\|272058_272607_-	hypothetical protein	A0A1B0YE60	Lactobacillus_phage	1.0e-97	97.8
WP_014569462.1\|272672_272831_-	hypothetical protein	NA	NA	NA	NA
WP_014569461.1\|272918_273146_+	hypothetical protein	NA	NA	NA	NA
WP_029943629.1\|273142_273391_-	hypothetical protein	NA	NA	NA	NA
WP_014569460.1\|273387_273630_-	helix-turn-helix transcriptional regulator	A0A0P0HRP5	Lactobacillus_phage	4.6e-34	95.0
WP_003574523.1\|273764_274103_+	helix-turn-helix transcriptional regulator	A0A0P0IZG9	Lactobacillus_phage	6.6e-55	98.2
WP_014569459.1\|274092_274515_+	toxin	A0A1B0YA58	Lactobacillus_phage	5.1e-73	93.5
WP_014569458.1\|274574_275276_+	DUF3862 domain-containing protein	A9D9J1	Lactobacillus_prophage	5.1e-25	39.3
WP_003606998.1\|275382_276138_+	hypothetical protein	NA	NA	NA	NA
WP_003606997.1\|276138_276360_-	hypothetical protein	NA	NA	NA	NA
WP_016364973.1\|276441_276609_-	hypothetical protein	NA	NA	NA	NA
WP_015764910.1\|276742_277168_+	pyridoxamine 5'-phosphate oxidase family protein	A0A0P0I7K6	Lactobacillus_phage	2.5e-59	94.3
WP_005716134.1\|277191_277395_+	hypothetical protein	A0A0P0IQK8	Lactobacillus_phage	8.6e-26	85.1
WP_014569456.1\|277505_278507_+	hypothetical protein	A0A1S5SA20	Streptococcus_phage	4.4e-06	23.3
WP_005716132.1\|278474_278681_-	hypothetical protein	NA	NA	NA	NA
WP_014569455.1\|278851_280036_+\|integrase	site-specific integrase	A0A0P0I3D2	Lactobacillus_phage	7.3e-226	99.2
287838:287852	attR	NA	NA	NA	NA

DBSCAN-SWA_2

853816 : 974272

103

Lactobacillus_phage(15.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014569138.1\|853816_855313_+\|transposase	IS5-like element ISLrh2 family transposase	NA	NA	NA	NA
WP_014569137.1\|855360_856197_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_127817602.1\|856480_856723_+	hypothetical protein	NA	NA	NA	NA
WP_014569018.1\|857567_859064_+\|transposase	IS5-like element ISLrh2 family transposase	NA	NA	NA	NA
WP_014569134.1\|859463_860636_+	hypothetical protein	NA	NA	NA	NA
WP_014569133.1\|860642_861326_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-24	30.9
WP_014569132.1\|861784_862213_+	OsmC family protein	NA	NA	NA	NA
WP_014569131.1\|862406_863426_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_014569130.1\|863412_863994_+	dihydroxyacetone kinase subunit L	NA	NA	NA	NA
WP_005686376.1\|864269_864638_+	PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM	NA	NA	NA	NA
WP_005691618.1\|864727_865294_+	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA
WP_005714981.1\|865522_867217_+	oleate hydratase	NA	NA	NA	NA
WP_014569129.1\|867487_868453_+	hypothetical protein	NA	NA	NA	NA
WP_014569128.1\|868632_869649_-	linear amide C-N hydrolase	M1H9I8	Acanthocystis_turfacea_Chlorella_virus	8.4e-21	28.8
WP_014569127.1\|869858_870716_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003605947.1\|871240_872659_+\|transposase	IS5-like element ISLrh3 family transposase	NA	NA	NA	NA
WP_015764850.1\|873797_873962_+	hypothetical protein	NA	NA	NA	NA
WP_014569126.1\|873919_874276_+	hypothetical protein	NA	NA	NA	NA
WP_015764849.1\|874259_874499_+	hypothetical protein	NA	NA	NA	NA
WP_014569125.1\|874492_874921_+	hypothetical protein	NA	NA	NA	NA
WP_014569124.1\|875330_876095_+	DUF4111 domain-containing protein	NA	NA	NA	NA
WP_005691594.1\|876243_876516_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA
WP_015764848.1\|876638_877457_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_014569123.1\|877703_879074_+	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-09	26.6
WP_014569121.1\|879362_880052_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.8e-28	37.1
WP_014569120.1\|880056_881118_-	ABC transporter permease	NA	NA	NA	NA
WP_014569119.1\|881125_881629_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_014569118.1\|881879_882677_+	hypothetical protein	NA	NA	NA	NA
WP_014569117.1\|882897_883662_-	LysM peptidoglycan-binding domain-containing protein	A0A2P1CCE6	Lactobacillus_phage	2.3e-47	52.0
WP_005686332.1\|883673_883826_-	YvrJ family protein	NA	NA	NA	NA
WP_014569116.1\|883942_884488_-	DNA-directed RNA polymerase subunit sigma-24	NA	NA	NA	NA
WP_014569115.1\|885214_885952_+	hypothetical protein	NA	NA	NA	NA
WP_014569114.1\|886420_887107_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_014569113.1\|887103_887772_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_014569112.1\|887785_888664_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_014569111.1\|888673_889426_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-22	33.0
WP_014569110.1\|889422_890484_+	NAD/NADP octopine/nopaline dehydrogenase family protein	NA	NA	NA	NA
WP_014569109.1\|890569_892000_-	amidohydrolase	NA	NA	NA	NA
WP_014569108.1\|892023_893223_-	MFS transporter	NA	NA	NA	NA
WP_031541855.1\|893456_895685_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_005714953.1\|895833_896688_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_015764844.1\|896955_898413_-	amino acid permease	NA	NA	NA	NA
WP_005714951.1\|898560_900042_-	amino acid permease	NA	NA	NA	NA
WP_014569105.1\|900074_903053_-	beta-galactosidase subunit alpha	L0N6M2	Herpes_simplex_virus	1.5e-147	34.3
WP_014569102.1\|904412_905735_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_014569018.1\|905736_907233_-\|transposase	IS5-like element ISLrh2 family transposase	NA	NA	NA	NA
WP_014569101.1\|907331_908585_+	MFS transporter	NA	NA	NA	NA
WP_003574021.1\|908619_909540_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_029944056.1\|909890_911447_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA
WP_014569099.1\|912289_912964_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.2e-58	51.8
WP_095691959.1\|913013_913800_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_005688360.1\|914307_915462_+	cation:proton antiporter	NA	NA	NA	NA
WP_003587111.1\|916566_919389_+	cation-transporting P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	3.1e-73	27.7
WP_003582045.1\|919448_919712_+	hypothetical protein	NA	NA	NA	NA
WP_101495030.1\|919763_920111_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014569097.1\|920315_921164_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.3e-43	37.1
WP_014569096.1\|921497_922289_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	2.0e-147	98.9
WP_014569095.1\|922342_922594_-\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	1.1e-35	92.8
WP_014569018.1\|922887_924384_+\|transposase	IS5-like element ISLrh2 family transposase	NA	NA	NA	NA
WP_014569094.1\|924501_926592_+	AAA family ATPase	NA	NA	NA	NA
WP_014569093.1\|926588_928376_+	UvrD-helicase domain-containing protein	U5PSZ2	Bacillus_phage	1.7e-08	25.9
WP_014569090.1\|929414_929972_+	hypothetical protein	NA	NA	NA	NA
WP_014568877.1\|930650_931667_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.2e-35	33.4
WP_014569089.1\|931807_934495_+	VWA domain-containing protein	NA	NA	NA	NA
WP_014569088.1\|934487_935213_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_014569087.1\|935215_936220_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_014569086.1\|936293_937373_+	class C sortase	NA	NA	NA	NA
WP_016382272.1\|937843_938242_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_076638850.1\|938365_938581_-	hypothetical protein	NA	NA	NA	NA
WP_002819966.1\|939319_939604_-	BRCT domain-containing protein	NA	NA	NA	NA
WP_003601979.1\|939609_940260_-	recombinase family protein	M9Q1K0	Clostridium_phage	1.5e-18	37.6
WP_014569083.1\|940601_941513_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	8.4e-20	33.0
WP_003660077.1\|941982_943797_-	FIVAR domain-containing protein	NA	NA	NA	NA
WP_014569082.1\|944626_945760_+	o-succinylbenzoate synthase	NA	NA	NA	NA
WP_041247639.1\|945791_946088_-	hypothetical protein	NA	NA	NA	NA
WP_014569081.1\|946111_946939_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_014569080.1\|946935_948636_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.8e-18	34.8
WP_005691490.1\|948637_949198_-	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA
WP_014569079.1\|949280_950117_-	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA
WP_014569078.1\|950444_951674_-	phosphopentomutase	NA	NA	NA	NA
WP_014569077.1\|951675_952848_-	YhfX family PLP-dependent enzyme	NA	NA	NA	NA
WP_005714935.1\|952838_953945_-	PLP-dependent transferase	NA	NA	NA	NA
WP_014569076.1\|953937_954822_-	TatD family hydrolase	NA	NA	NA	NA
WP_005714932.1\|954851_956147_-	YhfT family protein	NA	NA	NA	NA
WP_005714931.1\|956207_956570_-	DUF2620 domain-containing protein	NA	NA	NA	NA
WP_014569075.1\|956571_956922_-	PRD domain-containing protein	NA	NA	NA	NA
WP_014569074.1\|956954_957869_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_014569073.1\|958107_959139_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_005714910.1\|959342_960053_+	transaldolase	NA	NA	NA	NA
WP_014569072.1\|960092_961781_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_014569071.1\|961798_962227_+	PTS mannose transporter subunit IIB	NA	NA	NA	NA
WP_005714907.1\|962198_962675_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_005714906.1\|963219_964113_-	ketose-bisphosphate aldolase	NA	NA	NA	NA
WP_014569069.1\|964134_964950_-	class II fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_014568877.1\|965030_966047_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.2e-35	33.4
WP_014569068.1\|966210_967317_-	PTS fructose transporter subunit IIC	NA	NA	NA	NA
WP_005714903.1\|967341_967671_-	PTS fructose transporter subunit IIB	NA	NA	NA	NA
WP_014569067.1\|967675_968149_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_005714899.1\|968389_969148_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_014569066.1\|969197_970052_-	ROK family protein	NA	NA	NA	NA
WP_014569065.1\|970243_971260_-	transketolase	NA	NA	NA	NA
WP_014569064.1\|971252_972110_-	transketolase	NA	NA	NA	NA
WP_014568877.1\|973255_974272_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.2e-35	33.4

DBSCAN-SWA_3

1353564 : 1381450

Faecalibacterium_phage(16.67%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003605947.1\|1353564_1354983_-\|transposase	IS5-like element ISLrh3 family transposase	NA	NA	NA	NA
WP_076638938.1\|1355862_1356141_+	hypothetical protein	NA	NA	NA	NA
WP_014568882.1\|1356456_1357149_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_014568881.1\|1357264_1358761_+\|transposase	IS5-like element ISLrh2 family transposase	NA	NA	NA	NA
WP_014568879.1\|1359304_1359982_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_014568877.1\|1361017_1362034_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.2e-35	33.4
WP_005707490.1\|1362525_1362720_-	hypothetical protein	NA	NA	NA	NA
WP_014568875.1\|1362759_1363779_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_014568874.1\|1363771_1365250_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_005685670.1\|1365560_1366067_+	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_003568467.1\|1366460_1366697_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_005709832.1\|1366788_1367379_-	single-stranded DNA-binding protein	A0A2D1GPB7	Lactobacillus_phage	3.1e-52	59.7
WP_005685677.1\|1367408_1367705_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_005690380.1\|1367831_1368263_-	single-stranded DNA-binding protein	Q938M7	Temperate_phage	3.7e-26	44.8
WP_005685679.1\|1368372_1368465_+	hypothetical protein	NA	NA	NA	NA
WP_014568872.1\|1368586_1368790_-	hypothetical protein	NA	NA	NA	NA
WP_005690384.1\|1369193_1369424_-	hypothetical protein	NA	NA	NA	NA
WP_014568871.1\|1370116_1372729_-	DNA gyrase subunit A	A0A172JHV7	Bacillus_phage	3.2e-112	33.2
WP_005690389.1\|1372791_1374753_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	8.1e-145	45.8
WP_014568870.1\|1374784_1375903_-	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_014568869.1\|1375899_1376112_-	S4 domain-containing protein YaaA	NA	NA	NA	NA
WP_014568868.1\|1376605_1377745_-	DNA polymerase III subunit beta	D0R7I4	Paenibacillus_phage	7.7e-15	34.4
WP_005685692.1\|1377918_1379268_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
WP_014570251.1\|1379992_1381450_-\|transposase	ISNCY family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1384760 : 1440309

uncultured_Caudovirales_phage(15.38%)

capsid,tail,head,tRNA,integrase,portal,terminase

attL 1426278:1426298|attR 1440407:1440427

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005716635.1\|1384760_1386149_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_014570248.1\|1386189_1388091_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_014570247.1\|1388217_1389837_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.0e-13	27.9
WP_005685704.1\|1390136_1390355_+	hypothetical protein	NA	NA	NA	NA
WP_005685706.1\|1390494_1390701_+	hypothetical protein	NA	NA	NA	NA
WP_005685707.1\|1390906_1391671_+	threonine/serine exporter family protein	NA	NA	NA	NA
WP_005685708.1\|1391672_1392161_+	threonine/serine exporter family protein	NA	NA	NA	NA
WP_014570246.1\|1392157_1393357_+	amidohydrolase	NA	NA	NA	NA
WP_005685710.1\|1393556_1393754_-	hypothetical protein	NA	NA	NA	NA
WP_005685711.1\|1393746_1393923_-	hypothetical protein	NA	NA	NA	NA
WP_005685712.1\|1394299_1395385_-	iron-containing alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_005685714.1\|1396106_1396946_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014570245.1\|1396975_1397758_+	carbon-nitrogen family hydrolase	M1I0M9	Paramecium_bursaria_Chlorella_virus	1.1e-07	26.4
WP_005685716.1\|1397824_1398994_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_014570244.1\|1399271_1407083_+	leucine-rich repeat protein	NA	NA	NA	NA
WP_005685719.1\|1407182_1408418_-	hypothetical protein	NA	NA	NA	NA
WP_005685720.1\|1408579_1409773_-	ABC transporter permease	NA	NA	NA	NA
WP_005685721.1\|1409759_1410449_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.1e-39	41.3
WP_005685722.1\|1410441_1411509_-	transporter	NA	NA	NA	NA
WP_014570242.1\|1411889_1413071_-	ImmA/IrrE family metallo-endopeptidase	A0A0A7RTT7	Clostridium_phage	1.2e-31	31.0
WP_014570241.1\|1413082_1413856_-	hypothetical protein	NA	NA	NA	NA
WP_014570240.1\|1414182_1414359_-	hypothetical protein	NA	NA	NA	NA
WP_005685727.1\|1414369_1414630_-	hypothetical protein	NA	NA	NA	NA
WP_014570239.1\|1414961_1415747_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_014570238.1\|1416025_1416736_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_014570237.1\|1417204_1419022_+	PTS mannitol transporter subunit IICBA	NA	NA	NA	NA
WP_014570236.1\|1419057_1421115_+	HTH domain-containing protein	NA	NA	NA	NA
WP_005685732.1\|1421119_1421563_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_005685733.1\|1421566_1422721_+	mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
WP_005685734.1\|1422842_1423796_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_005685735.1\|1423963_1424893_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_005685736.1\|1425093_1426014_+	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	3.0e-41	32.3
1426278:1426298	attL	NA	NA	NA	NA
WP_003568375.1\|1426541_1426790_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_003568371.1\|1426805_1426946_+	hypothetical protein	NA	NA	NA	NA
WP_003586099.1\|1427464_1427806_-\|head	phage head closure protein	I7AUE6	Enterococcus_phage	9.4e-09	38.4
WP_003586097.1\|1427789_1428080_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_014570234.1\|1428141_1429701_-\|capsid	phage major capsid protein	A0A2H4J9X8	uncultured_Caudovirales_phage	3.3e-32	29.8
WP_014570233.1\|1429687_1430872_-\|portal	phage portal protein	A0A2H4JB06	uncultured_Caudovirales_phage	2.4e-59	34.4
WP_015765114.1\|1430876_1431056_-	hypothetical protein	NA	NA	NA	NA
WP_014570232.1\|1431021_1432725_-\|terminase	terminase	E9LUI0	Lactobacillus_phage	5.4e-121	40.6
WP_014570231.1\|1432721_1433192_-\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_172619743.1\|1433316_1433691_-	HNH endonuclease	D2JLE2	Staphylococcus_phage	3.8e-11	39.8
WP_014570229.1\|1433772_1434195_-	hypothetical protein	NA	NA	NA	NA
WP_014570228.1\|1434474_1435899_-	virulence protein	A0A1W6JQD6	Staphylococcus_phage	6.6e-64	37.6
WP_014570227.1\|1435891_1436719_-	bifunctional DNA primase/polymerase	Q854C1	Mycobacterium_phage	4.5e-12	34.9
WP_015765113.1\|1436702_1436891_-	hypothetical protein	NA	NA	NA	NA
WP_014570226.1\|1436887_1437160_-	hypothetical protein	NA	NA	NA	NA
WP_014570225.1\|1437204_1437396_-	hypothetical protein	NA	NA	NA	NA
WP_014570224.1\|1437506_1437728_-	hypothetical protein	NA	NA	NA	NA
WP_014570223.1\|1437795_1438071_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_029944073.1\|1438095_1438308_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014570222.1\|1438422_1439034_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014570221.1\|1439151_1440309_+\|integrase	site-specific integrase	A0A2P0ZL94	Lactobacillus_phage	1.3e-46	33.2
1440407:1440427	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1868184 : 1920094

Organic_Lake_phycodnavirus(22.22%)

transposase,bacteriocin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_107755086.1\|1868184_1869078_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.9e-37	33.7
WP_005687781.1\|1869450_1870635_+	MFS transporter	NA	NA	NA	NA
WP_014570117.1\|1870859_1872650_+	ABC transporter ATP-binding protein	F2Y1V6	Organic_Lake_phycodnavirus	8.2e-11	26.0
WP_005687784.1\|1872636_1874472_+	ABC transporter ATP-binding protein	F2Y1V6	Organic_Lake_phycodnavirus	3.3e-07	25.2
WP_014570116.1\|1875162_1875831_+	hypothetical protein	NA	NA	NA	NA
WP_005716598.1\|1876071_1876890_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_014570115.1\|1876882_1877584_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.1e-31	39.4
WP_014570114.1\|1877580_1878822_+	acyltransferase	NA	NA	NA	NA
WP_014570113.1\|1878772_1880305_+	AMP-binding protein	Q75ZG1	Hepacivirus	2.0e-29	28.8
WP_014570112.1\|1880294_1881269_+	aliphatic sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014570111.1\|1881474_1884198_-	family 78 glycoside hydrolase catalytic domain	NA	NA	NA	NA
WP_161756438.1\|1884561_1884726_+	hypothetical protein	NA	NA	NA	NA
WP_014570110.1\|1884835_1886350_+	MFS transporter	NA	NA	NA	NA
WP_014570109.1\|1886853_1887264_+	CrcB family protein	NA	NA	NA	NA
WP_014570108.1\|1887257_1887608_+	CrcB family protein	A0A2H4J148	uncultured_Caudovirales_phage	3.8e-05	37.8
WP_172619742.1\|1887806_1888094_+	KxYKxGKxW signal peptide domain-containing protein	NA	NA	NA	NA
WP_015765056.1\|1887982_1888276_-	hypothetical protein	NA	NA	NA	NA
WP_127817612.1\|1888304_1888493_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_014570106.1\|1889478_1890381_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_015765054.1\|1890721_1891231_+	hypothetical protein	NA	NA	NA	NA
WP_014570104.1\|1891358_1892000_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_014570103.1\|1892278_1893196_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005686796.1\|1893393_1893513_+	putative metal homeostasis protein	NA	NA	NA	NA
WP_005686799.1\|1893597_1893867_+	30S ribosomal protein S14	NA	NA	NA	NA
WP_005711178.1\|1894207_1894951_+	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.8e-12	26.4
WP_005686804.1\|1894947_1895841_+	metal ABC transporter permease	NA	NA	NA	NA
WP_014570102.1\|1895837_1896779_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005686809.1\|1896869_1897202_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014570101.1\|1897321_1897963_-	cation transporter	NA	NA	NA	NA
WP_005692195.1\|1898078_1898273_-	hypothetical protein	NA	NA	NA	NA
WP_015765053.1\|1898376_1899906_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_014570099.1\|1899939_1901310_+	MFS transporter	NA	NA	NA	NA
WP_005686819.1\|1901624_1901990_-	hypothetical protein	NA	NA	NA	NA
WP_014570098.1\|1902278_1904996_-	HAD-IC family P-type ATPase	M1HJQ2	Paramecium_bursaria_Chlorella_virus	1.6e-58	27.4
WP_099981497.1\|1905425_1907003_+	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_005686824.1\|1906986_1907124_+	hypothetical protein	NA	NA	NA	NA
WP_014570095.1\|1907554_1908298_+	hypothetical protein	NA	NA	NA	NA
WP_014570094.1\|1908472_1909852_+	class II fumarate hydratase	NA	NA	NA	NA
WP_014570093.1\|1909901_1910219_+	SHOCT domain-containing protein	NA	NA	NA	NA
WP_014570092.1\|1910243_1911389_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA
WP_014570091.1\|1911418_1912153_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_005686835.1\|1912623_1913577_+	aldo/keto reductase	NA	NA	NA	NA
WP_005686837.1\|1913751_1914093_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_014570089.1\|1914383_1914716_+	hypothetical protein	NA	NA	NA	NA
WP_014570088.1\|1914889_1916317_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	6.1e-33	26.4
WP_014570087.1\|1916371_1916812_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_014570085.1\|1917132_1917939_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_005711129.1\|1917988_1918174_+	hypothetical protein	NA	NA	NA	NA
WP_014570084.1\|1918560_1918746_+	hypothetical protein	NA	NA	NA	NA
WP_014570083.1\|1918805_1918991_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_005686855.1\|1919459_1919618_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_014570081.1\|1919794_1920094_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA

DBSCAN-SWA_6

2274170 : 2281043

Lactococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005692768.1\|2274170_2275223_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-20	32.9
WP_005692769.1\|2275224_2276208_+	ATP-binding cassette domain-containing protein	Q6GZ03	Mycoplasma_phage	1.7e-10	33.0
WP_014569871.1\|2276452_2277091_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_005686244.1\|2277338_2277650_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_005712952.1\|2277930_2278155_+	DUF2829 domain-containing protein	G3MBC9	Bacillus_virus	4.3e-10	40.4
WP_014569870.1\|2278151_2278865_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
WP_005715269.1\|2278981_2279482_+	QueT transporter family protein	E7DN70	Pneumococcus_phage	4.7e-09	29.3
WP_101495023.1\|2279775_2280102_+	type II toxin-antitoxin system MqsR family toxin	Q9AZG1	Lactococcus_phage	4.8e-10	39.6
WP_014569868.1\|2280113_2281043_+	DUF4065 domain-containing protein	Q9AZG0	Lactococcus_phage	4.5e-53	38.1

DBSCAN-SWA_7

2788259 : 2890359

Lactobacillus_phage(36.11%)

capsid,tail,transposase,head,tRNA,holin,integrase,portal,terminase

attL 2822804:2822863|attR 2857416:2857576

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094515910.1\|2788259_2789047_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014569697.1\|2789045_2789243_+	hypothetical protein	NA	NA	NA	NA
WP_014569696.1\|2789345_2790350_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_014569018.1\|2790406_2791903_-\|transposase	IS5-like element ISLrh2 family transposase	NA	NA	NA	NA
WP_005687689.1\|2792183_2792741_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_005687688.1\|2792743_2793334_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_005687687.1\|2793751_2794138_+	hypothetical protein	NA	NA	NA	NA
WP_005687686.1\|2794137_2794317_+	hypothetical protein	NA	NA	NA	NA
WP_005687685.1\|2794601_2794988_+	YxeA family protein	NA	NA	NA	NA
WP_005687684.1\|2795056_2795305_-	hypothetical protein	NA	NA	NA	NA
WP_005687683.1\|2795410_2796016_+	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_005687682.1\|2796012_2796507_+	DUF3013 family protein	NA	NA	NA	NA
WP_005687681.1\|2796587_2797532_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_014569694.1\|2797570_2798299_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_005687679.1\|2798336_2798660_+	hypothetical protein	NA	NA	NA	NA
WP_005687678.1\|2798964_2801190_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	J9Q7H7	Salmonella_phage	3.1e-07	35.1
WP_005687677.1\|2801316_2801763_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_005687676.1\|2801762_2802389_+	HAD hydrolase-like protein	NA	NA	NA	NA
WP_005687675.1\|2802490_2803813_-	N-acetylmuramoyl-L-alanine amidase	J9PV86	Bacillus_phage	3.0e-10	30.2
WP_005687674.1\|2803900_2804347_-	hypothetical protein	NA	NA	NA	NA
WP_005687673.1\|2804546_2805422_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	5.4e-24	31.0
WP_005687672.1\|2805418_2806927_+	ABC transporter permease	NA	NA	NA	NA
WP_014569692.1\|2807480_2808764_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_005687670.1\|2808765_2810571_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_005687669.1\|2810656_2811103_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_005687668.1\|2811407_2812328_+	YitT family protein	NA	NA	NA	NA
WP_005687667.1\|2812475_2813363_+	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	2.1e-20	27.0
WP_005687666.1\|2813359_2814190_-	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_005687665.1\|2814462_2814639_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_005687664.1\|2814666_2815101_+	GatB/YqeY domain-containing protein	A0A0K2FLI9	Brevibacillus_phage	9.5e-14	39.0
WP_005687663.1\|2815667_2816654_+	PhoH family protein	L7TP00	Rhizobium_phage	3.2e-49	45.2
WP_005687662.1\|2816657_2817116_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_005687661.1\|2817099_2817498_+	diacylglycerol kinase family protein	NA	NA	NA	NA
WP_005713928.1\|2817501_2817891_+	cytidine deaminase	NA	NA	NA	NA
WP_005687659.1\|2817887_2818790_+	GTPase Era	NA	NA	NA	NA
WP_005687658.1\|2818789_2819605_+	DNA repair protein RecO	NA	NA	NA	NA
WP_005687657.1\|2819755_2820067_+	hypothetical protein	NA	NA	NA	NA
WP_005685938.1\|2820721_2821435_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.7e-12	28.6
WP_005685935.1\|2821431_2822061_+	ABC-2 transporter permease	NA	NA	NA	NA
WP_005685933.1\|2822157_2822685_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
2822804:2822863	attL	NA	NA	NA	NA
WP_029944087.1\|2825263_2825491_+	hypothetical protein	NA	NA	NA	NA
WP_014569690.1\|2825529_2826768_+	hypothetical protein	NA	NA	NA	NA
WP_048653167.1\|2827174_2827756_+	HNH endonuclease	M1NMU3	Moumouvirus	5.7e-14	33.8
WP_015764966.1\|2827816_2828023_+	hypothetical protein	NA	NA	NA	NA
WP_014569689.1\|2828023_2828791_+	hypothetical protein	NA	NA	NA	NA
WP_015764965.1\|2828777_2829182_+	single-stranded DNA-binding protein	L0P8Q2	Lactobacillus_phage	1.4e-14	40.0
WP_015764964.1\|2829280_2829721_+	HNH endonuclease	B8R694	Lactobacillus_phage	9.3e-25	54.0
WP_014569688.1\|2829713_2829992_+	hypothetical protein	NA	NA	NA	NA
WP_014569018.1\|2830648_2832145_-\|transposase	IS5-like element ISLrh2 family transposase	NA	NA	NA	NA
WP_014569687.1\|2832210_2832960_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_107755075.1\|2832956_2833133_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_015764963.1\|2833365_2833926_+	recombinase family protein	A0A1J1J8Z4	Escherichia_phage	2.5e-35	44.2
WP_014569686.1\|2834407_2834872_+\|terminase	phage terminase small subunit P27 family	B8R648	Lactobacillus_phage	3.1e-23	39.7
WP_014569685.1\|2834865_2836758_+\|terminase	terminase large subunit	A0A0M7RDK9	Lactobacillus_phage	3.5e-153	44.0
WP_029943780.1\|2836881_2837064_+	DUF1056 family protein	NA	NA	NA	NA
WP_015764961.1\|2837060_2838161_+\|portal	phage portal protein	Q9AZM4	Lactococcus_phage	9.6e-79	43.6
WP_014569683.1\|2838160_2840089_+\|capsid	phage major capsid protein	A0A2P0ZLF9	Lactobacillus_phage	1.2e-68	46.1
WP_014569682.1\|2840160_2840451_+	hypothetical protein	NA	NA	NA	NA
WP_029943782.1\|2840440_2840785_+\|head	phage head closure protein	A8YQJ4	Lactobacillus_phage	1.1e-49	85.8
WP_014569680.1\|2840787_2841207_+	HK97 gp10 family phage protein	Q3L0S9	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	1.9e-64	90.6
WP_015764960.1\|2841203_2841584_+	DUF806 family protein	Q3L0S8	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	9.0e-61	92.9
WP_014569678.1\|2841584_2842220_+\|tail	phage tail protein	Q3L0S7	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	9.1e-98	89.6
WP_014569677.1\|2842374_2842725_+\|tail	tail protein	Q6J1X6	Lactobacillus_phage	2.2e-53	95.7
WP_021354705.1\|2842702_2842933_+	hypothetical protein	Q3L0S5	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	5.0e-38	98.7
WP_015764958.1\|2842938_2847105_+\|tail	tail protein	A8YQJ9	Lactobacillus_phage	0.0e+00	79.4
WP_014569674.1\|2847105_2849163_+\|tail	phage tail family protein	Q6J1X4	Lactobacillus_phage	1.3e-153	48.1
WP_014569673.1\|2849168_2852102_+\|tail	phage tail protein	B4XYQ5	Lactobacillus_phage	1.1e-311	68.7
WP_014569672.1\|2852111_2852435_+	hypothetical protein	B4XYQ6	Lactobacillus_phage	5.0e-52	99.1
WP_005689480.1\|2852427_2852559_+	XkdX family protein	Q3L0S0	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	4.2e-18	90.7
WP_003579629.1\|2852583_2852817_+	hypothetical protein	Q3L0R9	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	2.6e-34	98.7
WP_014569670.1\|2852829_2853162_+\|holin	phage holin	Q3L0R7	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	2.0e-32	100.0
WP_014569669.1\|2853164_2854319_+	LysM peptidoglycan-binding domain-containing protein	Q6J1W8	Lactobacillus_phage	9.9e-143	66.2
WP_014569668.1\|2854509_2854896_+	hypothetical protein	NA	NA	NA	NA
WP_015764956.1\|2855737_2856058_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014569667.1\|2856100_2857270_+\|integrase	site-specific integrase	A0A2P0ZL94	Lactobacillus_phage	2.6e-42	31.8
WP_005685932.1\|2857675_2858572_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
2857416:2857576	attR	NA	NA	NA	NA
WP_014569666.1\|2858573_2860643_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_005685928.1\|2860828_2862598_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	8.2e-56	31.4
WP_005685926.1\|2862611_2863862_+	RNA polymerase sigma factor RpoD	F4YCU2	Synechococcus_phage	1.1e-38	38.9
WP_005685924.1\|2864050_2864761_+\|tRNA	tRNA (adenine(22)-N(1))-methyltransferase TrmK	NA	NA	NA	NA
WP_005685922.1\|2864747_2865542_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_005685921.1\|2865916_2867647_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-06	24.3
WP_005685919.1\|2867612_2869118_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_005685917.1\|2869575_2869764_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_005685914.1\|2869797_2870148_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_005685911.1\|2870263_2871007_+	hypothetical protein	NA	NA	NA	NA
WP_005685909.1\|2871208_2872165_+	ABC transporter permease	NA	NA	NA	NA
WP_014569664.1\|2872151_2873483_+	RsmF rRNA methyltransferase first C-terminal domain-containing protein	NA	NA	NA	NA
WP_005685905.1\|2873589_2874624_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_005685903.1\|2874589_2875594_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_005685900.1\|2875601_2876537_-	mevalonate kinase	NA	NA	NA	NA
WP_005685898.1\|2876951_2880491_+	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA
WP_005685897.1\|2880487_2884198_+	helicase-exonuclease AddAB subunit AddA	S5MMD7	Bacillus_phage	6.4e-18	22.2
WP_005685896.1\|2884241_2887043_+	ribonuclease H-like domain-containing protein	A0A1X9I5C8	Streptococcus_phage	1.1e-54	33.3
WP_005685895.1\|2887317_2887809_+	DUF5590 domain-containing protein	NA	NA	NA	NA
WP_005685894.1\|2887861_2889037_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_005685893.1\|2889060_2890359_+\|tRNA	asparagine--tRNA ligase	M1PB22	Moumouvirus	2.9e-50	28.2

DBSCAN-SWA_8

2966995 : 3030697

uncultured_Caudovirales_phage(16.67%)

capsid,protease,tRNA,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005710545.1\|2966995_2968405_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IBU3	Erwinia_phage	2.3e-37	28.1
WP_005688016.1\|2968604_2969129_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_005688018.1\|2969247_2970144_-	tyrosine recombinase XerC	A0A2H4JAA2	uncultured_Caudovirales_phage	4.7e-15	25.9
WP_005688020.1\|2970344_2971664_-\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_005688022.1\|2971833_2973918_-	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	1.9e-104	37.4
WP_005688023.1\|2974163_2974979_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_005688024.1\|2975026_2975785_-	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	5.7e-22	36.6
WP_087307817.1\|2975768_2976629_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_014569641.1\|2976643_2977354_-	DUF4918 family protein	NA	NA	NA	NA
WP_014569640.1\|2977439_2977988_-	hypothetical protein	NA	NA	NA	NA
WP_014569639.1\|2978050_2978380_-	hypothetical protein	NA	NA	NA	NA
WP_029944033.1\|2978480_2979866_-	S41 family peptidase	NA	NA	NA	NA
WP_005686399.1\|2979891_2980134_-	YozE family protein	NA	NA	NA	NA
WP_014569637.1\|2980136_2980655_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_014569636.1\|2980680_2981322_-	YpmS family protein	NA	NA	NA	NA
WP_005686405.1\|2981326_2982172_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_005686408.1\|2982434_2983277_-	DegV family protein	NA	NA	NA	NA
WP_005686412.1\|2983517_2984159_+	hemolysin III family protein	NA	NA	NA	NA
WP_014569635.1\|2984294_2984786_-	dihydrofolate reductase	A0A1L7N103	Ralstonia_phage	7.7e-20	34.6
WP_005686416.1\|2984902_2985853_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	2.0e-125	66.2
WP_014569634.1\|2985869_2987783_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	3.4e-47	27.1
WP_005686420.1\|2987931_2988387_-	hypothetical protein	NA	NA	NA	NA
WP_014569633.1\|2988511_2989708_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	8.9e-46	32.8
WP_005686424.1\|2989808_2990687_+	YitT family protein	M1Q1P6	Streptococcus_phage	2.1e-52	38.5
WP_014569632.1\|2990705_2991971_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_005686429.1\|2992153_2992429_-	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	1.8e-26	68.5
WP_005686431.1\|2992662_2993970_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_005686432.1\|2994116_2995427_-	30S ribosomal protein S1	NA	NA	NA	NA
WP_014569631.1\|2995511_2996180_-	(d)CMP kinase	NA	NA	NA	NA
WP_014569630.1\|2996245_2996887_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_014569629.1\|2996946_2998356_-	ATP-dependent DNA helicase RecQ	F2NZ48	Diadromus_pulchellus_ascovirus	8.3e-59	39.1
WP_005713853.1\|2998342_2999332_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_005689273.1\|2999411_2999669_+	ferredoxin	NA	NA	NA	NA
WP_005686444.1\|2999839_3000418_-	ECF transporter S component	NA	NA	NA	NA
WP_005686446.1\|3000714_3001461_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_014569628.1\|3001444_3002062_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	9.3e-15	47.8
WP_005689268.1\|3002061_3002787_-	segregation/condensation protein A	NA	NA	NA	NA
WP_005686453.1\|3002761_3003148_-	hypothetical protein	NA	NA	NA	NA
WP_005686455.1\|3003339_3004221_-	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	1.4e-32	29.9
WP_014569627.1\|3004222_3005107_-	S1 RNA-binding protein	NA	NA	NA	NA
WP_005710606.1\|3005140_3005602_-	DUF441 domain-containing protein	NA	NA	NA	NA
WP_005686460.1\|3005829_3007596_-	pyruvate kinase	NA	NA	NA	NA
WP_005686462.1\|3007655_3008615_-	6-phosphofructokinase	NA	NA	NA	NA
WP_014569626.1\|3008726_3012023_-	DNA polymerase III subunit alpha	A0A0K1Y8F0	Streptomyces_phage	1.0e-152	33.3
WP_005686465.1\|3012118_3012313_+	YjzD family protein	NA	NA	NA	NA
WP_014569625.1\|3012426_3013287_-	hypothetical protein	NA	NA	NA	NA
WP_087307786.1\|3013375_3014929_-	5'-nucleotidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_005686471.1\|3014925_3015480_-	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_005686472.1\|3015648_3015840_-	50S ribosomal protein L32	NA	NA	NA	NA
WP_014570229.1\|3024643_3025066_+	hypothetical protein	NA	NA	NA	NA
WP_172619743.1\|3025147_3025522_+	HNH endonuclease	D2JLE2	Staphylococcus_phage	3.8e-11	39.8
WP_014570231.1\|3025646_3026117_+\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_014570232.1\|3026113_3027817_+\|terminase	terminase	E9LUI0	Lactobacillus_phage	5.4e-121	40.6
WP_015765114.1\|3027782_3027962_+	hypothetical protein	NA	NA	NA	NA
WP_014570233.1\|3027966_3029151_+\|portal	phage portal protein	A0A2H4JB06	uncultured_Caudovirales_phage	2.4e-59	34.4
WP_014570234.1\|3029137_3030697_+\|capsid	phage major capsid protein	A0A2H4J9X8	uncultured_Caudovirales_phage	3.3e-32	29.8

Anti-CRISPR protein detection

Acr_ID: NZ_CP021426.1|WP_014569459.1|274092_274515_+|toxin

Click the colored protein region to show detailed information

Acr_ID: NZ_CP021426.1|WP_014569461.1|272918_273146_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP021426.1|WP_029943629.1|273142_273391_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP021426.1|WP_014569459.1|274092_274515_+|toxin

274092_274515_+

140 aa aa

240310-280036

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP021426_2	TypeII	2.13\|2123266\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123266-2123295	30	265088-265059	2

1. spacer 2.13|2123266|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021426 position: 265088-265059, mismatch: 2

agatcgagcattacggcttgcaagactgcg	CRISPR spacer
agatcgagcactacggcttgcaatactgcg	Protospacer
**********.************ ******

NZ_CP021426.1|WP_014569461.1|272918_273146_+|hypothetical-protein

272918_273146_+

75 aa aa

240310-280036

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP021426_2	TypeII	2.13\|2123266\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123266-2123295	30	265088-265059	2

1. spacer 2.13|2123266|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021426 position: 265088-265059, mismatch: 2

agatcgagcattacggcttgcaagactgcg	CRISPR spacer
agatcgagcactacggcttgcaatactgcg	Protospacer
**********.************ ******

NZ_CP021426.1|WP_029943629.1|273142_273391_-|hypothetical-protein

273142_273391_-

82 aa aa

240310-280036

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP021426_2	TypeII	2.13\|2123266\|30\|NZ_CP021426\|CRISPRCasFinder,CRT,PILER-CR	2123266-2123295	30	265088-265059	2

1. spacer 2.13|2123266|30|NZ_CP021426|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021426 position: 265088-265059, mismatch: 2

agatcgagcattacggcttgcaagactgcg	CRISPR spacer
agatcgagcactacggcttgcaatactgcg	Protospacer
**********.************ ******

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP021426

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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