Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP018808 Histophilus somni strain USDA-ARS-USMARC-63374 chromosome, complete genome 0 crisprs cas14j,DEDDh,DinG,cas3 0 0 149 0

Results visualization

1. NZ_CP018808
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 30244 30 Streptococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_2 41468 : 45763 4 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 49275 : 52634 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 60440 : 60821 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_5 75192 : 78248 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_6 81317 : 88130 7 Prochlorococcus_phage(33.33%) protease NA
DBSCAN-SWA_7 104294 : 105224 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_8 123685 : 132982 8 Bodo_saltans_virus(25.0%) transposase NA
DBSCAN-SWA_9 139946 : 144582 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_10 151627 : 152548 2 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_11 163694 : 175976 5 Chrysochromulina_ericina_virus(33.33%) NA NA
DBSCAN-SWA_12 179498 : 194643 14 uncultured_Caudovirales_phage(28.57%) protease NA
DBSCAN-SWA_13 205448 : 206894 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_14 210217 : 215204 4 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_15 219326 : 225386 5 Enterobacteria_phage(33.33%) tRNA NA
DBSCAN-SWA_16 229533 : 237756 8 uncultured_Caudovirales_phage(20.0%) NA NA
DBSCAN-SWA_17 246894 : 315249 75 Haemophilus_phage(34.88%) plate,tail,tRNA,transposase,head NA
DBSCAN-SWA_18 320508 : 323118 2 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_19 327229 : 331296 4 Indivirus(33.33%) holin NA
DBSCAN-SWA_20 349807 : 354426 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_21 365664 : 366777 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_22 391738 : 401272 9 Bodo_saltans_virus(25.0%) NA NA
DBSCAN-SWA_23 409015 : 411019 1 Serratia_phage(100.0%) NA NA
DBSCAN-SWA_24 427807 : 434556 5 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_25 437895 : 440698 2 Micromonas_sp._RCC1109_virus(50.0%) NA NA
DBSCAN-SWA_26 446746 : 448603 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_27 454329 : 458105 4 Streptococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_28 468609 : 470073 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_29 474596 : 478912 6 Clostridium_phage(40.0%) NA NA
DBSCAN-SWA_30 485286 : 485550 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_31 491534 : 495053 3 uncultured_Mediterranean_phage(33.33%) transposase NA
DBSCAN-SWA_32 504087 : 505385 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_33 509629 : 511594 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_34 514616 : 515099 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_35 525854 : 533125 6 Tupanvirus(16.67%) transposase NA
DBSCAN-SWA_36 544924 : 548551 2 Enterococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_37 552208 : 552976 1 Pandoravirus(100.0%) tRNA NA
DBSCAN-SWA_38 560731 : 562240 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_39 570689 : 571697 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_40 578801 : 588332 8 Tupanvirus(20.0%) NA NA
DBSCAN-SWA_41 613854 : 623532 10 Enterobacteria_phage(16.67%) tRNA NA
DBSCAN-SWA_42 631149 : 632664 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_43 638752 : 640046 2 Bradyrhizobium_phage(50.0%) NA NA
DBSCAN-SWA_44 645257 : 653451 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_45 661303 : 666240 5 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_46 670688 : 675147 5 Catovirus(33.33%) NA NA
DBSCAN-SWA_47 678827 : 682563 4 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_48 687054 : 689034 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_49 696958 : 700947 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_50 706492 : 707917 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_51 730401 : 740680 9 Organic_Lake_phycodnavirus(40.0%) NA NA
DBSCAN-SWA_52 745364 : 748839 2 EBPR_podovirus(50.0%) NA NA
DBSCAN-SWA_53 759563 : 765827 5 Vibrio_phage(40.0%) tRNA NA
DBSCAN-SWA_54 784387 : 785035 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_55 819845 : 823927 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_56 836292 : 841368 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_57 847770 : 850730 2 Ostreococcus_tauri_virus(50.0%) holin,protease NA
DBSCAN-SWA_58 857345 : 861897 3 Bacillus_phage(50.0%) tRNA NA
DBSCAN-SWA_59 866709 : 867555 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_60 879535 : 881467 2 Pseudomonas_phage(50.0%) protease,tRNA NA
DBSCAN-SWA_61 887980 : 889498 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_62 893909 : 895400 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_63 905834 : 906884 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_64 916113 : 917130 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_65 939876 : 944162 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_66 951460 : 958918 5 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_67 969498 : 971967 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_68 977873 : 982707 5 Orpheovirus(33.33%) NA NA
DBSCAN-SWA_69 986524 : 989020 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_70 995820 : 996162 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_71 999820 : 1000294 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_72 1010815 : 1013901 3 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_73 1019043 : 1038488 20 Tupanvirus(12.5%) tRNA,protease NA
DBSCAN-SWA_74 1047213 : 1050108 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_75 1057150 : 1057570 1 Sphingomonas_phage(100.0%) NA NA
DBSCAN-SWA_76 1060586 : 1061129 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_77 1067643 : 1072821 2 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_78 1083030 : 1094294 5 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_79 1105268 : 1121536 15 Acidithiobacillus_phage(12.5%) NA NA
DBSCAN-SWA_80 1125849 : 1127874 1 Brevibacillus_phage(100.0%) NA NA
DBSCAN-SWA_81 1140031 : 1155626 16 Escherichia_phage(14.29%) tRNA NA
DBSCAN-SWA_82 1163668 : 1170825 8 Pseudomonas_phage(40.0%) lysis NA
DBSCAN-SWA_83 1176791 : 1177076 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_84 1186036 : 1186762 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_85 1194146 : 1198061 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_86 1202094 : 1203042 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_87 1207618 : 1209067 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_88 1217391 : 1218036 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_89 1244020 : 1245769 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_90 1249167 : 1251131 2 unidentified_phage(50.0%) NA NA
DBSCAN-SWA_91 1255921 : 1261965 6 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_92 1266227 : 1266878 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_93 1273440 : 1275637 2 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_94 1302302 : 1308561 5 Moraxella_phage(33.33%) tRNA NA
DBSCAN-SWA_95 1314631 : 1317697 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_96 1334248 : 1336211 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_97 1342575 : 1345221 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_98 1351152 : 1357506 7 Bacillus_virus(25.0%) tRNA NA
DBSCAN-SWA_99 1371742 : 1373044 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_100 1377060 : 1451141 67 Burkholderia_phage(10.0%) integrase,transposase,terminase attL 1395243:1395260|attR 1446422:1446434
DBSCAN-SWA_101 1454155 : 1456168 1 Rhizobium_phage(100.0%) NA NA
DBSCAN-SWA_102 1471878 : 1472649 1 Stenotrophomonas_phage(100.0%) NA NA
DBSCAN-SWA_103 1477471 : 1479523 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_104 1487009 : 1490908 5 Bodo_saltans_virus(33.33%) transposase NA
DBSCAN-SWA_105 1496248 : 1497610 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_106 1501173 : 1503692 2 Mycoplasma_phage(50.0%) NA NA
DBSCAN-SWA_107 1511049 : 1511619 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_108 1516546 : 1517203 1 Acaryochloris_phage(100.0%) NA NA
DBSCAN-SWA_109 1520277 : 1522458 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_110 1529929 : 1532341 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_111 1537616 : 1542041 7 Streptococcus_phage(25.0%) transposase NA
DBSCAN-SWA_112 1554251 : 1556960 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_113 1560818 : 1579578 17 Ostreococcus_lucimarinus_virus(12.5%) transposase,tRNA NA
DBSCAN-SWA_114 1582892 : 1584299 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_115 1593156 : 1594491 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_116 1619599 : 1623473 4 Brevibacillus_phage(50.0%) NA NA
DBSCAN-SWA_117 1630942 : 1640255 9 uncultured_Mediterranean_phage(25.0%) tRNA NA
DBSCAN-SWA_118 1647407 : 1654810 6 uncultured_Mediterranean_phage(75.0%) tRNA NA
DBSCAN-SWA_119 1660436 : 1722235 62 Escherichia_phage(14.29%) integrase,tRNA,transposase,protease attL 1672558:1672574|attR 1715490:1715506
DBSCAN-SWA_120 1732508 : 1739267 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_121 1748584 : 1749220 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_122 1752809 : 1755993 3 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_123 1760187 : 1763133 3 Mannheimia_phage(33.33%) NA NA
DBSCAN-SWA_124 1766847 : 1820879 57 Mannheimia_phage(35.48%) integrase,protease,terminase,transposase,capsid attL 1786880:1786897|attR 1816714:1816731
DBSCAN-SWA_125 1830459 : 1832148 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_126 1836167 : 1843008 7 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_127 1848969 : 1850806 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_128 1880400 : 1884987 5 Chrysochromulina_ericina_virus(25.0%) NA NA
DBSCAN-SWA_129 1896817 : 1897825 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_130 1915447 : 1916185 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_131 1920797 : 1924064 3 Indivirus(50.0%) tRNA NA
DBSCAN-SWA_132 1934020 : 1935538 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_133 1944891 : 1951843 7 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_134 1958798 : 1959548 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_135 1972427 : 1972688 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_136 1977876 : 1978830 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_137 1983117 : 2002486 14 Enterobacteria_phage(11.11%) tRNA NA
DBSCAN-SWA_138 2015712 : 2016972 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_139 2021133 : 2021364 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_140 2034235 : 2047880 16 Lactococcus_phage(16.67%) NA NA
DBSCAN-SWA_141 2053493 : 2061481 10 Clostridium_phage(20.0%) NA NA
DBSCAN-SWA_142 2081017 : 2085824 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_143 2108423 : 2109932 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_144 2122076 : 2123617 2 Synechococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_145 2127069 : 2128829 2 Lactobacillus_phage(50.0%) NA NA
DBSCAN-SWA_146 2132452 : 2133943 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_147 2146155 : 2147199 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_148 2151148 : 2164279 13 Escherichia_phage(57.14%) NA NA
DBSCAN-SWA_149 2179839 : 2181714 1 Catovirus(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage