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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP021535 Escherichia coli strain AR_0119 chromosome, complete genome 7 crisprs csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL 0 18 11 0
NZ_CP021536 Escherichia coli strain AR_0119 plasmid unitig_2, complete sequence 0 crisprs DEDDh 0 0 2 0
NZ_CP021538 Escherichia coli strain AR_0119 plasmid unitig_4, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP021537 Escherichia coli strain AR_0119 plasmid unitig_3, complete sequence 0 crisprs RT,c2c9_V-U4 0 0 2 0

Results visualization

1. NZ_CP021535
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021535_1 1480572-1481698 Unclear I-E
18 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021535_2 1507398-1507913 TypeI-E I-E
8 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021535_3 2785242-2785365 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021535_4 2874075-2874185 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021535_5 3528318-3528409 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021535_6 3793063-3793207 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021535_7 4023271-4023367 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP038506 Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence 11835-11866 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP019283 Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence 42147-42178 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 CP042641 Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence 36520-36551 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP034821 Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence 1557-1588 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP027443 Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence 9506-9537 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP027575 Escherichia coli strain 2013C-4081 plasmid unnamed2 94756-94787 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP027223 Escherichia coli strain 2015C-3101 plasmid unnamed2 65534-65565 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP030188 Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence 61916-61947 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP027590 Escherichia coli strain 2014C-3011 plasmid unnamed2 64165-64196 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP039862 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence 20286-20317 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP033632 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence 119284-119315 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_AP018798 Escherichia coli strain E2855 plasmid pE2855-2, complete sequence 85099-85130 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 CP012494 Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence 46688-46719 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 CP027320 Escherichia coli strain 2014C-3084 plasmid unnamed1 42116-42147 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NC_013370 Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence 87237-87268 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP026475 Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence 81853-81884 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 MN510445 Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence 70500-70531 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 MN510447 Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence 47861-47892 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP012491 Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence 62997-63028 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 MH422554 Escherichia phage P1, complete genome 87194-87225 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NC_050152 Enterobacteria phage P7, complete genome 93995-94026 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 MH445380 Escherichia virus P1 isolate transconjugant 2(L-II), complete genome 58645-58676 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NC_031129 Salmonella phage SJ46, complete genome 77363-77394 0 1.0
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 MH445381 Escherichia virus P1, complete genome 56870-56901 0 1.0
NZ_CP021535_5 5.1|3528344|40|NZ_CP021535|CRISPRCasFinder 3528344-3528383 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_KP453775 Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence 17440-17471 2 0.938
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP017632 Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence 122310-122341 2 0.938
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP030285 Escherichia coli strain E308 plasmid pLKSZ04, complete sequence 6029-6060 2 0.938
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 NZ_CP036204 Escherichia coli strain L725 plasmid punnamed2, complete sequence 15121-15152 2 0.938
NZ_CP021535_2 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT 1507853-1507884 32 MN510446 Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence 131402-131433 2 0.938
NZ_CP021535_3 3.1|2785285|38|NZ_CP021535|CRISPRCasFinder 2785285-2785322 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP021535_1 1.15|1481455|32|NZ_CP021535|CRISPRCasFinder,CRT 1481455-1481486 32 NZ_CP017563 Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence 632328-632359 5 0.844
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP016452 Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence 112048-112078 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP022775 Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence 138722-138752 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NC_014310 Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence 134876-134906 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP022762 Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence 159432-159462 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP023017 Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence 139796-139826 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NC_016624 Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence 255946-255976 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP014703 Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence 159432-159462 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP022760 Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence 132848-132878 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP022789 Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence 132849-132879 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP022771 Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence 159441-159471 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP022777 Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence 159459-159489 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP022799 Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence 159431-159461 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP022764 Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence 138736-138766 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP022797 Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence 138734-138764 6 0.806
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP022758 Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence 138733-138763 6 0.806
NZ_CP021535_1 1.9|1481089|32|NZ_CP021535|CRISPRCasFinder,CRT 1481089-1481120 32 NZ_CP017077 Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence 831891-831922 7 0.781
NZ_CP021535_1 1.9|1481089|32|NZ_CP021535|CRISPRCasFinder,CRT 1481089-1481120 32 NZ_CP034813 Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence 109991-110022 7 0.781
NZ_CP021535_1 1.18|1481638|32|NZ_CP021535|CRISPRCasFinder,CRT 1481638-1481669 32 KR080197 Mycobacterium phage FlagStaff, complete genome 15476-15507 7 0.781
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP009154 Burkholderia pseudomallei strain TSV202 plasmid 2, complete sequence 17332-17362 7 0.774
NZ_CP021535_1 1.1|1480601|32|NZ_CP021535|CRISPRCasFinder,CRT 1480601-1480632 32 NZ_CP016283 Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_1, complete sequence 62256-62287 8 0.75
NZ_CP021535_1 1.3|1480723|32|NZ_CP021535|CRISPRCasFinder,CRT 1480723-1480754 32 MF773750 Mycobacterium phage OKCentral2016, complete genome 32038-32069 8 0.75
NZ_CP021535_1 1.3|1480723|32|NZ_CP021535|CRISPRCasFinder,CRT 1480723-1480754 32 JX307704 Mycobacterium virus Goose, complete genome 32135-32166 8 0.75
NZ_CP021535_1 1.9|1481089|32|NZ_CP021535|CRISPRCasFinder,CRT 1481089-1481120 32 NZ_CP040764 Paracoccus sp. 2251 plasmid unnamed3, complete sequence 159957-159988 8 0.75
NZ_CP021535_1 1.11|1481211|32|NZ_CP021535|CRISPRCasFinder,CRT 1481211-1481242 32 MK416007 Klebsiella phage ST405-OXA48phi1.2, complete genome 5007-5038 8 0.75
NZ_CP021535_1 1.13|1481333|32|NZ_CP021535|CRISPRCasFinder,CRT 1481333-1481364 32 NC_014825 Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL02, complete sequence 131301-131332 8 0.75
NZ_CP021535_1 1.15|1481455|32|NZ_CP021535|CRISPRCasFinder,CRT 1481455-1481486 32 NZ_CP029830 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence 460575-460606 8 0.75
NZ_CP021535_1 1.18|1481638|32|NZ_CP021535|CRISPRCasFinder,CRT 1481638-1481669 32 NZ_CP014600 Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence 15418-15449 8 0.75
NZ_CP021535_2 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507488-1507519 32 NZ_CP038019 Eikenella exigua strain PXX plasmid unnamed1, complete sequence 39637-39668 8 0.75
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP016452 Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence 1470278-1470308 8 0.742
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP012575 Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence 7608-7638 8 0.742
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 CP048046 Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence 7168-7198 8 0.742
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP048050 Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence 94061-94091 8 0.742
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP048048 Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence 9778-9808 8 0.742
NZ_CP021535_1 1.7|1480967|32|NZ_CP021535|CRISPRCasFinder,CRT 1480967-1480998 32 CP034667 Proteus vulgaris strain PvSC3 plasmid pPvSC3, complete sequence 11529-11560 9 0.719
NZ_CP021535_1 1.7|1480967|32|NZ_CP021535|CRISPRCasFinder,CRT 1480967-1480998 32 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 1243128-1243159 9 0.719
NZ_CP021535_1 1.10|1481150|32|NZ_CP021535|CRISPRCasFinder,CRT 1481150-1481181 32 MN698241 Pelagibacter phage HTVC027P, complete genome 53788-53819 9 0.719
NZ_CP021535_1 1.12|1481272|32|NZ_CP021535|CRISPRCasFinder,CRT 1481272-1481303 32 NZ_CP010863 Marinovum algicola DG 898 plasmid pMaD8, complete sequence 80627-80658 9 0.719
NZ_CP021535_1 1.13|1481333|32|NZ_CP021535|CRISPRCasFinder,CRT 1481333-1481364 32 NZ_CP005987 Acidithiobacillus caldus ATCC 51756 plasmid megap mpAca1.1, complete sequence 65430-65461 9 0.719
NZ_CP021535_1 1.13|1481333|32|NZ_CP021535|CRISPRCasFinder,CRT 1481333-1481364 32 MN163281 Klebsiella phage KpCHEMY26, complete genome 2153-2184 9 0.719
NZ_CP021535_1 1.15|1481455|32|NZ_CP021535|CRISPRCasFinder,CRT 1481455-1481486 32 NZ_CP006988 Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence 91348-91379 9 0.719
NZ_CP021535_1 1.16|1481516|32|NZ_CP021535|CRISPRCasFinder,CRT 1481516-1481547 32 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 224876-224907 9 0.719
NZ_CP021535_1 1.18|1481638|32|NZ_CP021535|CRISPRCasFinder,CRT 1481638-1481669 32 NZ_CP009292 Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence 139210-139241 9 0.719
NZ_CP021535_2 2.1|1507427|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507427-1507458 32 NZ_CP032328 Azospirillum brasilense strain MTCC4035 plasmid p7, complete sequence 29293-29324 9 0.719
NZ_CP021535_2 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507488-1507519 32 NC_024216 Bacillus phage CAM003, complete genome 77679-77710 9 0.719
NZ_CP021535_2 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507488-1507519 32 KJ489400 Bacillus phage Hoody T, complete genome 77517-77548 9 0.719
NZ_CP021535_2 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507488-1507519 32 MF288921 Bacillus phage OTooleKemple52, complete genome 77645-77676 9 0.719
NZ_CP021535_2 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507488-1507519 32 MH638310 Bacillus phage Kamfam, complete genome 77630-77661 9 0.719
NZ_CP021535_2 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507488-1507519 32 MK215646 Bacillus phage vB_BthM-Goe5, complete genome 76671-76702 9 0.719
NZ_CP021535_2 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507488-1507519 32 MF498901 Bacillus phage Anthony, complete genome 78265-78296 9 0.719
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP050092 Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence 739494-739524 9 0.71
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 NZ_CP017077 Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence 694600-694630 9 0.71
NZ_CP021535_2 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT 1507732-1507762 31 AP014383 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S44-C10, *** SEQUENCING IN PROGRESS *** 34869-34899 9 0.71
NZ_CP021535_1 1.1|1480601|32|NZ_CP021535|CRISPRCasFinder,CRT 1480601-1480632 32 NZ_CP042264 Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence 182843-182874 10 0.688
NZ_CP021535_1 1.6|1480906|32|NZ_CP021535|CRISPRCasFinder,CRT 1480906-1480937 32 NZ_CP043499 Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence 65082-65113 10 0.688
NZ_CP021535_1 1.18|1481638|32|NZ_CP021535|CRISPRCasFinder,CRT 1481638-1481669 32 NZ_CP012383 Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence 14130-14161 10 0.688

1. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
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2. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
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3. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
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4. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

5. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

6. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

7. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

8. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

9. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

10. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

11. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

12. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

13. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

14. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

15. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

16. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

17. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

18. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

19. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

20. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

21. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

22. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

23. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

24. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

25. spacer 5.1|3528344|40|NZ_CP021535|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcattcttgaaattccccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
************************ ***************

26. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

27. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

28. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

29. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

30. spacer 2.8|1507853|32|NZ_CP021535|CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

31. spacer 3.1|2785285|38|NZ_CP021535|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

32. spacer 1.15|1481455|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 5, identity: 0.844

gcgatctcgcggaatacaccgacg-aggcgggc	CRISPR spacer
acgatctcgcggaatacgtcgacgtaggccgg-	Protospacer
.****************..***** **** ** 

33. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gcggtcaaatccggcgagccgccggcgctct	Protospacer
 **  *******.***********.***** 

34. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

35. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

36. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

37. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

38. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 6, identity: 0.806

-ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ttcgcg-gcatccagcgtgccgccgtcgctca	Protospacer
 .**** . ******** ******* ******

39. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

40. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

41. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

42. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

43. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

44. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

45. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

46. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

47. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

48. spacer 1.9|1481089|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 7, identity: 0.781

tcgggacgctgcgcgatctgcatagcaacgca	CRISPR spacer
tcggtgcgctgcgcgatctgcatgtcttcgaa	Protospacer
**** .*****************. *  ** *

49. spacer 1.9|1481089|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP034813 (Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tcgggacgctgcgcgatctgcatag-caacgca	CRISPR spacer
tgtggacggtgcgctatctgcatagcctgcgc-	Protospacer
*  ***** ***** ********** * .*** 

50. spacer 1.18|1481638|32|NZ_CP021535|CRISPRCasFinder,CRT matches to KR080197 (Mycobacterium phage FlagStaff, complete genome) position: , mismatch: 7, identity: 0.781

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
gacgccggcgccgcgatgccgttcgccgggtt	Protospacer
******* ******** ******. * . ***

51. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009154 (Burkholderia pseudomallei strain TSV202 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.774

ccgcgcaaatccagcgagccgccgacgctca---	CRISPR spacer
gcccgcacattcagcgagccgccgac---caagc	Protospacer
 * **** **.***************   **   

52. spacer 1.1|1480601|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP016283 (Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_1, complete sequence) position: , mismatch: 8, identity: 0.75

ccagggtgagccagcgccgcaggaagacacgc	CRISPR spacer
ccagagtgagccagccccgcaggctgcctctg	Protospacer
****.********** *******  * * *  

53. spacer 1.3|1480723|32|NZ_CP021535|CRISPRCasFinder,CRT matches to MF773750 (Mycobacterium phage OKCentral2016, complete genome) position: , mismatch: 8, identity: 0.75

gagcgtagagattctcgaaaccgatccggacg	CRISPR spacer
cctcgtagagatcctcgaagccgatctcggcg	Protospacer
   *********.******.******. *.**

54. spacer 1.3|1480723|32|NZ_CP021535|CRISPRCasFinder,CRT matches to JX307704 (Mycobacterium virus Goose, complete genome) position: , mismatch: 8, identity: 0.75

gagcgtagagattctcgaaaccgatccggacg	CRISPR spacer
cctcgtagagatcctcgaagccgatctcggcg	Protospacer
   *********.******.******. *.**

55. spacer 1.9|1481089|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP040764 (Paracoccus sp. 2251 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tcgggacgctgcgcgatctgcatagcaacgca	CRISPR spacer
tgtccacgctgcgcgatctgcatcgcagcggc	Protospacer
*    ****************** ***.**  

56. spacer 1.11|1481211|32|NZ_CP021535|CRISPRCasFinder,CRT matches to MK416007 (Klebsiella phage ST405-OXA48phi1.2, complete genome) position: , mismatch: 8, identity: 0.75

tttctatctcccagtgggagagagatgacagt	CRISPR spacer
tcacgatctcccagtgggaaagggatgaaacc	Protospacer
*. * **************.**.***** * .

57. spacer 1.13|1481333|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NC_014825 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL02, complete sequence) position: , mismatch: 8, identity: 0.75

-catgaatatggacgatgaaaaaataagagagg	CRISPR spacer
ctacgca-ggggacgttgaaaaactaagagagg	Protospacer
 .*.* * . ***** ******* *********

58. spacer 1.15|1481455|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatctcgcggaatacaccgacgaggcgggc	CRISPR spacer
gcctgctggcggaatacgccgacgaggcgacg	Protospacer
**   ** *********.***********.  

59. spacer 1.18|1481638|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
gtcgccgccgccgcgcagccctttccacagcc	Protospacer
* ************* **** *****.  *..

60. spacer 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038019 (Eikenella exigua strain PXX plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cttattgagttggcacaggaattacatgagga	CRISPR spacer
caccaagagttggcacaggaattggatgaggc	Protospacer
* .   *****************. ****** 

61. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 8, identity: 0.742

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgcgcaaatcgagcgtgccgccggtgaggc	Protospacer
*********** **** *******..*    

62. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012575 (Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence) position: , mismatch: 8, identity: 0.742

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ctcggcagatccagcgcgccgccgacgagcg	Protospacer
*.  ***.******** **********  *.

63. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to CP048046 (Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence) position: , mismatch: 8, identity: 0.742

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ctcggcagatccagcgcgccgccgacgagcg	Protospacer
*.  ***.******** **********  *.

64. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048050 (Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence) position: , mismatch: 8, identity: 0.742

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ctcggcagatccagcgcgccgccgacgagcg	Protospacer
*.  ***.******** **********  *.

65. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048048 (Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence) position: , mismatch: 8, identity: 0.742

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ctcggcagatccagcgcgccgccgacgagcg	Protospacer
*.  ***.******** **********  *.

66. spacer 1.7|1480967|32|NZ_CP021535|CRISPRCasFinder,CRT matches to CP034667 (Proteus vulgaris strain PvSC3 plasmid pPvSC3, complete sequence) position: , mismatch: 9, identity: 0.719

agacggcgcgtaaaactcatacggcgacaaat	CRISPR spacer
agacggcgcgtaagactcagacggttttttac	Protospacer
*************.***** ****.  .  *.

67. spacer 1.7|1480967|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

agacggcgcgtaaaactcatacggcgacaaat	CRISPR spacer
agacggcgcgcaaaactcagacgctcgccatc	Protospacer
**********.******** *** . .* * .

68. spacer 1.10|1481150|32|NZ_CP021535|CRISPRCasFinder,CRT matches to MN698241 (Pelagibacter phage HTVC027P, complete genome) position: , mismatch: 9, identity: 0.719

gtatttttgctgacggattctcagagagtttc	CRISPR spacer
gagctattgctgatggattatcagagagtggt	Protospacer
* ..* *******.***** *********  .

69. spacer 1.12|1481272|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP010863 (Marinovum algicola DG 898 plasmid pMaD8, complete sequence) position: , mismatch: 9, identity: 0.719

gggtatcgcactgcggcagatgttccggggcc---	CRISPR spacer
catgatcgccctgccgcagatgttcc---gcctgg	Protospacer
 .  ***** **** ***********   ***   

70. spacer 1.13|1481333|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP005987 (Acidithiobacillus caldus ATCC 51756 plasmid megap mpAca1.1, complete sequence) position: , mismatch: 9, identity: 0.719

catgaatatggacgatgaaaaaataagagagg	CRISPR spacer
ggtgaataaggacgatgagaaaataatcgcaa	Protospacer
 .****** *********.*******  * ..

71. spacer 1.13|1481333|32|NZ_CP021535|CRISPRCasFinder,CRT matches to MN163281 (Klebsiella phage KpCHEMY26, complete genome) position: , mismatch: 9, identity: 0.719

catgaatatggacgatgaaaaaataagagagg-------	CRISPR spacer
catgaatctggacgatgataaa-------aggtttctcc	Protospacer
******* ********** ***       ***       

72. spacer 1.15|1481455|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 9, identity: 0.719

gcgatctcgcggaatacaccgacgaggcgggc	CRISPR spacer
cgcacgtcgcggattacatcgacgaggcggta	Protospacer
   *. ******* ****.***********  

73. spacer 1.16|1481516|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

taaggccgtcgccggatcagcctggctatgcc	CRISPR spacer
cggggccgtcgccggatcagccggtctgctgc	Protospacer
...******************* * **..  *

74. spacer 1.18|1481638|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 9, identity: 0.719

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
gaagccgccgccgcgaacccgtttttcccggg	Protospacer
** ************** ******..  .*  

75. spacer 2.1|1507427|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032328 (Azospirillum brasilense strain MTCC4035 plasmid p7, complete sequence) position: , mismatch: 9, identity: 0.719

caacaaaacgctggaagccggaacagatatct	CRISPR spacer
gcccgaaacgctggaagccggagcacatgccc	Protospacer
   *.*****************.** **..*.

76. spacer 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NC_024216 (Bacillus phage CAM003, complete genome) position: , mismatch: 9, identity: 0.719

cttattgagttggcacaggaattacatgagga-----	CRISPR spacer
agtattgagctggcacaggtattac-----gactctt	Protospacer
  *******.********* *****     **     

77. spacer 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to KJ489400 (Bacillus phage Hoody T, complete genome) position: , mismatch: 9, identity: 0.719

cttattgagttggcacaggaattacatgagga-----	CRISPR spacer
agtattgagctggcacaggtattac-----gactatt	Protospacer
  *******.********* *****     **     

78. spacer 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to MF288921 (Bacillus phage OTooleKemple52, complete genome) position: , mismatch: 9, identity: 0.719

cttattgagttggcacaggaattacatgagga-----	CRISPR spacer
agtattgagctggcacaggtattac-----gactatt	Protospacer
  *******.********* *****     **     

79. spacer 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to MH638310 (Bacillus phage Kamfam, complete genome) position: , mismatch: 9, identity: 0.719

cttattgagttggcacaggaattacatgagga-----	CRISPR spacer
agtattgagctggcacaggtattac-----gactatt	Protospacer
  *******.********* *****     **     

80. spacer 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to MK215646 (Bacillus phage vB_BthM-Goe5, complete genome) position: , mismatch: 9, identity: 0.719

cttattgagttggcacaggaattacatgagga-----	CRISPR spacer
agtattgagctggcacaggtattac-----gactatt	Protospacer
  *******.********* *****     **     

81. spacer 2.2|1507488|32|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to MF498901 (Bacillus phage Anthony, complete genome) position: , mismatch: 9, identity: 0.719

cttattgagttggcacaggaattacatgagga-----	CRISPR spacer
agtattgagctggcacaggtattac-----gactatt	Protospacer
  *******.********* *****     **     

82. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050092 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence) position: , mismatch: 9, identity: 0.71

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
tcttcggcatccagcgagccgccgtcgccca	Protospacer
.* .  . **************** ***.**

83. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 9, identity: 0.71

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gtcttcaagtcgagcgagccgccgacgccga	Protospacer
 . . ***.** ****************. *

84. spacer 2.6|1507732|31|NZ_CP021535|PILER-CR,CRISPRCasFinder,CRT matches to AP014383 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S44-C10, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.71

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
atgatgaaatccaacgagccgccgaggcttt	Protospacer
 .*   *******.*********** ***. 

85. spacer 1.1|1480601|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP042264 (Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

ccagggtgagccagcgccgcaggaagacacgc	CRISPR spacer
tcagggtgaaccagcggcgcaggatttcggaa	Protospacer
.********.****** *******   *. . 

86. spacer 1.6|1480906|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tcatcgaaaaccagcggatcgaatgggacgcc	CRISPR spacer
gcgatcgctacgagccgatcgaatgggacgcc	Protospacer
 *. . .  ** *** ****************

87. spacer 1.18|1481638|32|NZ_CP021535|CRISPRCasFinder,CRT matches to NZ_CP012383 (Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence) position: , mismatch: 10, identity: 0.688

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
ttgcccgccgcggcgaagccgcttccgtcctc	Protospacer
    ******* *********.***** . *.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 205172 : 256152 63 Salmonella_phage(79.49%) tail,capsid,protease,head,plate,integrase,portal,transposase,holin attL 238655:238671|attR 264353:264369
DBSCAN-SWA_2 1524268 : 1531408 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_3 2197976 : 2207418 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_4 2437337 : 2473249 40 Escherichia_phage(32.14%) holin,integrase,tail attL 2425857:2425871|attR 2447239:2447253
DBSCAN-SWA_5 2705318 : 2723352 20 Enterobacteria_phage(69.23%) tail,tRNA NA
DBSCAN-SWA_6 2858835 : 2910647 58 Enterobacteria_phage(37.93%) tail,protease,integrase,terminase,transposase,lysis attL 2875966:2875980|attR 2893475:2893489
DBSCAN-SWA_7 3096398 : 3109570 16 Enterobacteria_phage(41.67%) transposase,holin,tail NA
DBSCAN-SWA_8 3114388 : 3132687 21 Escherichia_phage(66.67%) integrase,tRNA attL 3115725:3115738|attR 3130110:3130123
DBSCAN-SWA_9 3209212 : 3267092 76 Salmonella_phage(42.59%) tail,capsid,protease,head,plate,integrase,holin attL 3226971:3226987|attR 3267279:3267295
DBSCAN-SWA_10 4252821 : 4313623 52 Shigella_phage(44.44%) holin,integrase,tail attL 4281701:4281716|attR 4311670:4311685
DBSCAN-SWA_11 4711588 : 4727831 16 Salmonella_phage(28.57%) transposase,integrase attL 4709050:4709109|attR 4732583:4733350
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP021536
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 14799 : 46401 30 Salmonella_phage(25.0%) transposase,integrase attL 17556:17571|attR 42651:42666
DBSCAN-SWA_2 197172 : 234527 36 Macacine_betaherpesvirus(33.33%) transposase,integrase attL 208585:208599|attR 231129:231143
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP021538
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4261 : 45204 37 Salmonella_phage(25.0%) transposase,integrase attL 923:940|attR 49745:49762
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP021537
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2872 : 69491 84 Escherichia_phage(82.89%) integrase,plate,terminase,capsid,tail,tRNA attL 7905:7921|attR 24543:24559
DBSCAN-SWA_2 74117 : 96788 20 Escherichia_phage(95.0%) holin,lysis,transposase,head NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage