CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP021852	Proteus mirabilis strain AR_0156 chromosome, complete genome	5 crisprs	c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG,DEDDh,WYL,TnsE_C,csa3	4	10	14	1
NZ_CP021853	Proteus mirabilis strain AR_0156 plasmid unitig_1, complete sequence	0 crisprs	DEDDh	0	0	1	0
NZ_CP021855	Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence	2 crisprs	NA	0	4	0	0
NZ_CP021854	Proteus mirabilis strain AR_0156 plasmid unitig_2, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021852_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021852_1

501390-501784

TypeI-E

I-E

Consensus_repeat	Method
CGGTTCATCCCCGTATACACGGGGAACAC	CRISPRCasFinder
CGGTTCATCCCCGTATACACGGGGAACAC	CRT
CGGTTCATCCCCGTATACACGGGGAACAC	PILER-CR

6 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP021852_1

>merge|NZ_CP021852|1|501390-501784|CRISPRCasFinder,CRT,PILER-CR
TAATTTATCCCCGTATACACGGGGAACACAATCCTGCTCGACTTTTTAAAGCCGTGGATAACGGTTCATCCCCGTATGCACGGGGAACACATATCGACCACCTCATAACCTAAGAATGTATGCGGTTCATCCCCGTATACACGGGGAACACTCTTCAATAGCTGCGATAAAGTCAGTGAACATCGGTTCATCCCCGTATACACGGGGAACACGGTATCGGAACATAGGGTTCGAGTCCTATCCCCGGTTCATCCCCGTATACACGGGGAACACTACCAAATCTGTGTTTGATCATTTTTAAATTCCGGTTCATCCCCGTATACACGGGGAACACTTAACTTTAACCCTGACGAACGTCTACGGGTTCGGTTCATCCCCGTATACACGGGGAACAC

>NZ_CP021852|1|1|501390-501784|CRISPRCasFinder
TAATTTATCCCCGTATACACGGGGAACAC	AATCCTGCTCGACTTTTTAAAGCCGTGGATAA
CGGTTCATCCCCGTATGCACGGGGAACAC	ATATCGACCACCTCATAACCTAAGAATGTATG
CGGTTCATCCCCGTATACACGGGGAACAC	TCTTCAATAGCTGCGATAAAGTCAGTGAACAT
CGGTTCATCCCCGTATACACGGGGAACAC	GGTATCGGAACATAGGGTTCGAGTCCTATCCC
CGGTTCATCCCCGTATACACGGGGAACAC	TACCAAATCTGTGTTTGATCATTTTTAAATTC
CGGTTCATCCCCGTATACACGGGGAACAC	TTAACTTTAACCCTGACGAACGTCTACGGGTT
CGGTTCATCCCCGTATACACGGGGAACAC

>NZ_CP021852|1|1|501390-501784|CRT
TAATTTATCCCCGTATACACGGGGAACAC	AATCCTGCTCGACTTTTTAAAGCCGTGGATAA
CGGTTCATCCCCGTATGCACGGGGAACAC	ATATCGACCACCTCATAACCTAAGAATGTATG
CGGTTCATCCCCGTATACACGGGGAACAC	TCTTCAATAGCTGCGATAAAGTCAGTGAACAT
CGGTTCATCCCCGTATACACGGGGAACAC	GGTATCGGAACATAGGGTTCGAGTCCTATCCC
CGGTTCATCCCCGTATACACGGGGAACAC	TACCAAATCTGTGTTTGATCATTTTTAAATTC
CGGTTCATCCCCGTATACACGGGGAACAC	TTAACTTTAACCCTGACGAACGTCTACGGGTT
CGGTTCATCCCCGTATACACGGGGAACAC

>NZ_CP021852|1|1|501451-501784|PILER-CR
CGGTTCATCCCCGTATGCACGGGGAACAC	ATATCGACCACCTCATAACCTAAGAATGTATG
CGGTTCATCCCCGTATACACGGGGAACAC	TCTTCAATAGCTGCGATAAAGTCAGTGAACAT
CGGTTCATCCCCGTATACACGGGGAACAC	GGTATCGGAACATAGGGTTCGAGTCCTATCCC
CGGTTCATCCCCGTATACACGGGGAACAC	TACCAAATCTGTGTTTGATCATTTTTAAATTC
CGGTTCATCCCCGTATACACGGGGAACAC	TTAACTTTAACCCTGACGAACGTCTACGGGTT
CGGTTCATCCCCGTATACACGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021852.1\|WP_088206634.1\|507750_510444_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP021852.1\|WP_004247166.1\|496598_496742_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP021852.1\|WP_004243716.1\|491757_492960_+\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NZ_CP021852.1\|WP_017627993.1\|501842_502139_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP021852.1\|WP_049196924.1\|504489_505524_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP021852.1\|WP_088206631.1\|499997_501221_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|183984
NZ_CP021852.1\|WP_004243721.1\|511274_512531_-\|PTS-ascorbate-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|236502
NZ_CP021852.1\|WP_017627990.1\|503739_504477_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP021852.1\|WP_012368108.1\|512541_512829_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
NZ_CP021852.1\|WP_049200714.1\|505581_506169_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP021852.1\|WP_004247166.1\|496058_496202_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP021852.1\|WP_004243712.1\|490910_491366_-\|DUF412-domain-containing-protein	unknown	unknown	gnl\|CDD\|179338
NZ_CP021852.1\|WP_088206630.1\|497520_499920_+\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	unknown	unknown	gnl\|CDD\|274418
NZ_CP021852.1\|WP_017827864.1\|493037_495182_+\|phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|235537
NZ_CP021852.1\|WP_017627992.1\|502141_503062_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP021852.1\|WP_004247166.1\|497139_497283_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP021852.1\|WP_023843594.1\|490275_490770_-\|YfbU-family-protein	unknown	unknown	gnl\|CDD\|180087
NZ_CP021852.1\|WP_004247166.1\|495517_495661_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP021852.1\|WP_088206633.1\|506155_507754_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NZ_CP021852.1\|WP_088206632.1\|503062_503740_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|187858

Protein	Function_ID	Function_description	E-value
NZ_CP021852.1\|WP_088206634.1\|507750_510444_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.72401e-142
NZ_CP021852.1\|WP_004247166.1\|496598_496742_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	5.93268e-09
NZ_CP021852.1\|WP_004243716.1\|491757_492960_+\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NZ_CP021852.1\|WP_017627993.1\|501842_502139_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.37501e-60
NZ_CP021852.1\|WP_049196924.1\|504489_505524_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	6.50124e-120
NZ_CP021852.1\|WP_088206631.1\|499997_501221_-\|alanine-racemase	gnl\|CDD\|183984	PRK13340, PRK13340, alanine racemase; Reviewed.	0
NZ_CP021852.1\|WP_004243721.1\|511274_512531_-\|PTS-ascorbate-transporter-subunit-IIC	gnl\|CDD\|236502	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed.	0
NZ_CP021852.1\|WP_017627990.1\|503739_504477_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.81256e-48
NZ_CP021852.1\|WP_012368108.1\|512541_512829_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	4.22877e-30
NZ_CP021852.1\|WP_049200714.1\|505581_506169_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.73826e-22
NZ_CP021852.1\|WP_004247166.1\|496058_496202_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	5.93268e-09
NZ_CP021852.1\|WP_004243712.1\|490910_491366_-\|DUF412-domain-containing-protein	gnl\|CDD\|179338	PRK01816, PRK01816, hypothetical protein; Provisional.	7.72253e-90
NZ_CP021852.1\|WP_088206630.1\|497520_499920_+\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	gnl\|CDD\|274418	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.	0
NZ_CP021852.1\|WP_017827864.1\|493037_495182_+\|phosphate-acetyltransferase	gnl\|CDD\|235537	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed.	0
NZ_CP021852.1\|WP_017627992.1\|502141_503062_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.56752e-144
NZ_CP021852.1\|WP_004247166.1\|497139_497283_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	5.93268e-09
NZ_CP021852.1\|WP_023843594.1\|490275_490770_-\|YfbU-family-protein	gnl\|CDD\|180087	PRK05445, PRK05445, YfbU family protein.	1.95663e-106
NZ_CP021852.1\|WP_004247166.1\|495517_495661_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	5.93268e-09
NZ_CP021852.1\|WP_088206633.1\|506155_507754_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	2.55618e-138
NZ_CP021852.1\|WP_088206632.1\|503062_503740_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	8.99639e-57

>NZ_CP021852.1|WP_088206631.1|499997_501221_-|alanine-racemase
MSLAIRYLALLPLFVITACQQPVNYNPPATQVAQAQPAIVNNSWIEISRSALDFNVKKVQSLLGKQSSLCAVLKGDAYGHDLSLVAPIMIENNVQCIGVTNNQELKEVRDLGFKGRLMRVRNATEQEMAQATNYNVEELIGDLDMAKRLDAIAKQQNKVIPIHLALNSGGMSRNGLEVDNKSGLEKAKQISQLANLKVVGIMSHYPEEDANKVREDLARFKQQSQQVLEVMGLERNNVTLHMANTFATITVPESWLDMVRVGGIFYGDTIASTDYKRVMTFKSNIASINYYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSNAGHALIAGQRVPVLGKTSMNTIMVDITSLNNIKPGDEVVFFGKQGNSEITAEEIEDISGALFTEMSILWGATNQRVLVD
>NZ_CP021852.1|WP_088206630.1|497520_499920_+|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family
MKISHFYRWIVFIILTILALYFTVLGGYLVSLAGSPFYLFTGVMLLIIAACFLSRRKSTLLLFNFLFLITIVWSIWESGFDFWALAPRLDIIFILGLLLIPFTLNNNVYTCRTNKIGLFTLLATTLIIILGSSLTDPHAINGQFTQQQPTNSISPIGVNDNDWPAYGRTQAGIRYSPLTQINSDNVDKLVEKWTFHTGDEKRANDAVEITNEVTPIKIEDNLFLCTPHQYLISLDPATGKEKWRFDSKLQYNKSFQHMTCRGVAYYNQNNSAEFAKSLDVRQPSISDECPEKVFLPVNDGRLIAVNAQTGNACRDFGQNGEINLLASMPYAYLGGYNPTSPPIITGNTIIIGGSVTDNLSTQEPSGVIRGYDVNSGKLIWVFDTGAEDPNAMPGKETQFVHNSPNAWAPLAYDAQTDVVYIPTGVGTPDIWGGDRHPLKERYANSVLALKGSTGELLWHFQTTHHDLWDMDVPSQPSLVDIKTDKNETIPAIYIVTKTGNVFVLDRRDGTPIVPVTEKPVPTSVKYGPQTQGEHYSPTQPFSALNLAPKNKLQGSDMWGGTMADQLLCRIAFHQLNYEGIYTPPSENGTLVFPGNLGIFEWGGISVNQDRQVAVMNFITLPFISKLYLKDPQDSQAIDAGHGEQGLQPMTGTPYSVDIHPFLSPLGLPCKQPPWGFVAGVDLTKNELVWQQRFGTIRDSLPNLVELPPLKIGVPGLGGAISTAGNVMFVAASQDNYIRAFNVTNGKMLWEARLPAGGQATPMTYSIGGKQYVVIMAGGHGSFGTKMGDSLVAYGLPDNL
>NZ_CP021852.1|WP_004247166.1|497139_497283_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MTKLALIGLITVCITVLCFTLLRHERLCSFNISSGNTLVQANLSCDK
>NZ_CP021852.1|WP_004247166.1|496598_496742_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MTKLALIGLITVCITVLCFTLLRHERLCSFNISSGNTLVQANLSCDK
>NZ_CP021852.1|WP_004247166.1|496058_496202_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MTKLALIGLITVCITVLCFTLLRHERLCSFNISSGNTLVQANLSCDK
>NZ_CP021852.1|WP_004247166.1|495517_495661_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MTKLALIGLITVCITVLCFTLLRHERLCSFNISSGNTLVQANLSCDK
>NZ_CP021852.1|WP_017827864.1|493037_495182_+|phosphate-acetyltransferase
MSRTIMLVPTDTRVGLTSVSLGVIRSMEQKGVRLSVFKPIAQPRVKGALDQTTAIIRSHSTIQSAEPLNMDYVESLLSSNKKDVLMEEIVARYHENTADAEVVLIEGLVPMRKHPFAQSLNYEIAKTLGAEIVFVTALGNNTAEQLKERIEFARAEFGGVKNQNITGVIVNKLNAPVDDQGRTRPDLSEIFDDSSKAIISNIDLNTIEKNSPLPLLGCIPWNFDLIATRATDMAKHLNATIVNKGDIETRRIKSVTFCARSIPHMLEHFRPGSLLVTSADRPDVLVSACLAAMNGVEIGAILLTGGYQIDAPIKQLCERAFETGLPIFMVNSNTWQTSLNLQSFSLEVPADDHERIEKIQNYVAQHINNQWIDSLTANSERPNRLSPPAFRYQLTELARKAKKRIVLPEGDEPRTVKAASICAERGIATCVLLGDPEEIRRVAAAQGVELGTGIELVNPKEVREIYVPRLVELRKNKGMTEVVAREQLEDNVVLGTLMLEKGVVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSAKAFGIDPRVAMISYSTGNSGAGSDVEKVREATRLAQEKRPDLIIDGPLQYDAAVMADVAKSKAPNSPVAGKATVFIFPDLNTGNTTYKAVQRSADLVSIGPMLQGMRKPVNDLSRGALVDDIVYTVALTAIQASQQENA
>NZ_CP021852.1|WP_004243716.1|491757_492960_+|acetate-kinase
MSSKLVLVLNCGSSSLKFAIINPENGEEFLSGLAECFNLPEARLKWKMDGQKHEAALGAGAAHSEALNFIVNTILAEKPELSQQIAAIGHRIVHGGEKFTKSVVITDEVIKGIEAAIPFAPLHNPAHLIGIEEARKAFPHLINKMVAVFDTAFHQTMPEEAYLYALPYSLYKDHSIRRYGAHGTSHFFVSREAAKMLNKPVDELNVITCHLGNGGSVSAIVNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIVFHLHDTLGMSVEDINKLLTKESGLLGLTEVTSDCRYVEDNYETKADAKRAMDVYCHRLAKYIGSYCALMEGRLDAIIFTGGIGENAAMVRELSLKKLALLGFEVDHQRNLDARFGKSGTITTDNSRLAVVIPTNEELVIAQDASRLTA
>NZ_CP021852.1|WP_004243712.1|490910_491366_-|DUF412-domain-containing-protein
MNEPTVTPPGFFKKLRLGNEYLKTWPVEKQLAPVFPENRMIKATRFGIRYMPPIAIFTLTWQIALGGDLGPAITTALFACSLPMQGLWWLGKRAATPLPAVLLNWFYEIREKFEQAGIALAPVEKTPTYLSLAHLLKRAFKQLDRSFLDDV
>NZ_CP021852.1|WP_023843594.1|490275_490770_-|YfbU-family-protein
MEMTHAQRLILSNQYKMMTMMDPDNAERYRRYQTIIERGYGLQLRELDRDFDEMSEETCRTIINIMEMYHALQVSRENLKSPEMPDARRVAFMGFDAATESRYLSYVRFMVNTEGRYTHFDSGSHGFNSQTPMWEKYQRMLAVWLACPRQYHLSSVEIQQILNA
>NZ_CP021852.1|WP_017627993.1|501842_502139_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMIVVVTEAVPPRLRGRLAVWLLEVRAGVYVGNVSARIREMIWQQINEFAEDGNVVMAWGTNTESGFDFQTYGENRREPIDFDGLRLVLFKPYKEDV
>NZ_CP021852.1|WP_017627992.1|502141_503062_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MAFIPLRPIPIKDRHSMIFIGMGRIDVKDGAFVVIDEINGERMLIPVGSLACILLEPGTRISHAAVKLAATVGTLLIWVGEAGVRLYSVGQPGGARSDKLLYQAKLALDNDLRLKVVRKMFELRFGESAPLKRSVDQLRGIEGARVRKQYQMLAKKFKIDWKGRRYDPKDWEAGDIINRCISAATACLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPVAFKVASYKAIAPDREVRIACREAFRKYQTLNKLIPLIEEVLSAGEITPPEPPIDAQPPAIPQAHPFGDEGHREK
>NZ_CP021852.1|WP_088206632.1|503062_503740_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRISIDYSADYLHSLLANKLPDGYTIHQLLWRLFTEEKERSFLYRLEIGKNGKPIFYILSSIAPTTKNNIFKIETKPFLPKLVKKMKLAFSLRANPTVCITDKEGKRHRHDVLMHAKKQAQLDGKDYSHDDIHHLMQQAALNWISSDDRLNKWGISLTQLPDIKAYTPERIKKPSGKIMSFSSVDYQGVLTIEEPHLFWQQYQQGFGRAKAFGCGLMLIRNI
>NZ_CP021852.1|WP_017627990.1|503739_504477_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MAQYLVFRLYGPLASWGLPAVGGDRQTGIAPSRSAILGLLSASLGINRKDESKLLQLQQSVLVATKQLVPSMLLRDFHTAQVPSKRKNITHPTRRSELAEKDQNTILSSRDYRCDAIWIIAIKLTGHSQYTLEQLKNALLKPVYILSLGRKSCPLSLPMMPKIVEVEQLKEALDTQFPYITTSDKADSYWFHSDGWVTYFWEGNYQDIKGENIMTLYPWDDPINRQHWQFRQRKMYQMSVKRESE
>NZ_CP021852.1|WP_049196924.1|504489_505524_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSQFIQLHILTSYAPSNLNRDDLGRPKTAIMGGFERLRISSQSLKRHWRTSELFNIALSGNIGIRTKKFGLQLYDALIEGGVSEKNAKNWVGLIIEQYGKIKKDSIETEQLVHISHLEKSLAFDLINLLIKEQREPTKQELESLKTINTSVDIALFGRMLASAPKYNIEAACQVAHAISVHSTVIEDDYFTAVDDLNNGETDTGSAHIGEAGFAAALFYSYICINKTQLIESLDGNEELANKAIQALTEVAIKVSPTGKQNSFASRAYASYVLAEKGSYQPRSLSVAFLKPIDDEDMENAAINALKFRMENFDKVYGTCAESRYQLNAVQGEGSLSGLLQFVAE
>NZ_CP021852.1|WP_049200714.1|505581_506169_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MGSYKSKNITLYNYPELKINVLRWWESLFLSPNELSKKGILPAPNRYKSELKRCDSITAIMLTEGFRALWLSFPVDLINNATTEDIERWATIVAILVYITQDSEKHFATIAGEKDESKKSCISESRFLQLQSSRTYDEFIRRLRRILIQIKGKSSVLSMCKDIEKWVLEKQRFSSIQTNKQIIIEWAMKYYQAAI
>NZ_CP021852.1|WP_088206633.1|506155_507754_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNIINQPWLPFRFRDGEIKTLPISAISHPDIIDFSLNRADFKGAAYQFAIGLLQTIFAPEDEDEWEEYFETPPSSKKLQSAFDKVAHAFNIMGDGPLFMQDFSTLEEQKNIPIAQLLIDAPGENGIKQNTDHFIKQGIADVMSLEMAVLALFTLQINAPSGGKGHLVSLRGGGPLTTLVYPAEENSTLWQKLWLNVINREFWEYDEPNFDDGSVFPWLIPLNLKEGKGEKVSPDDVHPLYMYWAMPRRIRLKVENKSVTCQISDMKSNFSVKYYVTKNYGLDYQEGWLHPLTPYYWDPKKPEMFPNSIKGRQGGIHYNLWDRLFLSSNENGQKSATVVSHYLKLYQLLEFTRKPRLLIFGYDMDNMKPRGWYNLEMPIFHVKDEYNNKIINEIKIIQKLTIDCLKSVKEQVKKAWFSSPKDMKGDISFIDLTFWQRSENIFFEVVQNIIVQIQKNDFLTHEQAKKWLNSIRKISISIFDEYALSALGTQKSVSGCIKARNGLIKDLYSNKRIKKFAEDFKITKENGEQYGIL
>NZ_CP021852.1|WP_088206634.1|507750_510444_-|CRISPR-associated-helicase/endonuclease-Cas3
MDKDYYSYWGKFKSENNHEYYHLLPYHSLDVAAVGMILFPENSKIIKDISTFLQIHPKEFSKLFLLLLSLHDIGKFSSSFQYINPNIIDKLKVPESRFSYDGNNYRHDRLGYYFWRKIKNTIFSSIIISNADYKERKISDGFWIIFETALGHHGKPINKNNIDESIENYIHKDNDKAAIDFTLDILKLFSPKLSVENFYDKGWKERLKQISWLLAGMVTLSDWIGSNRDYFPYYKKKIPLSEYWFLALNRAKKAVLSSGFNRNYQISPFISVEYHFGYKPTPLQQWAEKVTINEHPQLFILEDTTGSGKTEAALTLAHRLMEVDAADGFYFGLPTQATSNAMFLRIINHYKKIFDEKKEVPSIVLAHSASNMNEQFTKIIRDGNERYNISDNTASAQCYQWLSDSRKKALLATIGVGTLDQALLSMLPRRHQSLRLLGLNRKIIIFDEIHSADEFMFEIIEKLLSTHLHQGGSVILLTATLSLKQRKRIIDSWFNAFDQISPEIESKSFPLATHLTCFPKVIKKEYPLKSRNQVSRKVKVEIINKEEQCIDIIISAINNGNCVVWIRNTVNDAIKSYYDIKKRLSKDNNCLLFHSRFNLKDRKIREEQVLKYFGKNSTAQQRKGTVLIATQVFQESLDADADIMISDICPIDDLIQRSGRLHRHTRTKYGDYTSETIDKRRPPILYVHAPLFIETPSSCWLTEQFSSTETVYRSPGRLWLTLRSLTRLGEINMPKDARQLIESVYSDNAYNEIPQSLIQKENNDIGEKKARVSKAKIQLLKINKGYSEESSEFWTEDHYDISTRYSDIEMVNILLLKKIKDNYVPWIEDSHFSIALSTVKISKKKYADKLVSVPQEVIDTINKQYPQARYLQLWIPDEDQYYQYDHLIGFCERQELS
>NZ_CP021852.1|WP_004243721.1|511274_512531_-|PTS-ascorbate-transporter-subunit-IIC
MDFFRFLMSDVLSEPAILVGLIALIGLIAQKKPATECIKGTVKTIMGFVILGAGAGLVINSLGDFSTIFQHAFGIQGVVPNNEAIVSIAQKSFGKEMALIMFFAMLINILIARLTPWKYIFLTGHHTLFMSMMVAVILATAGLEGAVLVAVGSLVVGVSMVFFPAIAHPYMKKITGSDDVALGHFSTISYVVSGFIGSKFGNKAHSTEEMNVPKSLLFLRDTPVAIAFTMGIIFIITCLFAGDTFVREVSGGKNWFMFSLMQSITFAAGVYIILQGVRMVIAEIVPAFKGISDKLVPNAKPALDCPVVFPYAPNAVLVGFLSSFAAGVIGMFILYALDWTVIIPGVVPHFFVGATAGVFGNATGGRRGAILGAFAQGLLITFLPVFLLPVLGDIGIANTTFSDADFGVIGILLGIIVR
>NZ_CP021852.1|WP_012368108.1|512541_512829_-|PTS-sugar-transporter-subunit-IIB
MKITVVCGNGLGSSLMMEMSIKSILKDLAVNADVDHVDLGSAKGTPSDIYVGTRDIAEQLNAQAVNGKIVSLDNMIDKVAMKEKLSTALRELGAL

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Crispr_ID: NZ_CP021852_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021852_2

510689-511144

TypeI-E

I-E

Consensus_repeat	Method
CGGTTCATCCCCGTGCATACGGGGAACAC	PILER-CR
CGGTTCATCCCCGTGCATACGGGGAACAC	CRISPRCasFinder
CGGTTCATCCCCGTGCATACGGGGAACAC	CRT

7 spacers

cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2

The CRISPR arrays of NZ_CP021852_2

>merge|NZ_CP021852|2|510689-511144|PILER-CR,CRISPRCasFinder,CRT
CGATTCATCCCCGTGCATACGGGGAACACAAAAGCTATTTGATAGCAACGTAATTGAACTACGGTTCATCCCCGTGCATACGGGGAACACGACACCTGTATTGTCTGTAATCGAGAGACTGACGGTTCATCCCCGTGCATACGGGGAACACCCAATTGTTCCCGTGTATGGTGAGTGGTCATTCGGTTCATCCCCGTGCATACGGGGAACACAAAGAAATCCCTGAACAAGATGCGGTTTACACCGGTTCATCCCCGTGCATACGGGGAACACAAATATATATAAGAAGTATTGAATTCTGTTTCCGGTTCATCCCCGTGCATACGGGGAACACTTCAATTCAAAATTTTCATCAAGAACAATGGTCGGTTCATCCCCGTGCATACGGGGAACACATTGACAGTTATATTATGTCTATACTTTTGGCCGGTTCATCCCCGTGCATACGGGGAACAC

>NZ_CP021852|2|2|510689-511144|PILER-CR
CGATTCATCCCCGTGCATACGGGGAACAC	AAAAGCTATTTGATAGCAACGTAATTGAACTA
CGGTTCATCCCCGTGCATACGGGGAACAC	GACACCTGTATTGTCTGTAATCGAGAGACTGA
CGGTTCATCCCCGTGCATACGGGGAACAC	CCAATTGTTCCCGTGTATGGTGAGTGGTCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	AAAGAAATCCCTGAACAAGATGCGGTTTACAC
CGGTTCATCCCCGTGCATACGGGGAACAC	AAATATATATAAGAAGTATTGAATTCTGTTTC
CGGTTCATCCCCGTGCATACGGGGAACAC	TTCAATTCAAAATTTTCATCAAGAACAATGGT
CGGTTCATCCCCGTGCATACGGGGAACAC	ATTGACAGTTATATTATGTCTATACTTTTGGC
CGGTTCATCCCCGTGCATACGGGGAACAC

>NZ_CP021852|2|2|510689-511144|CRISPRCasFinder
CGATTCATCCCCGTGCATACGGGGAACAC	AAAAGCTATTTGATAGCAACGTAATTGAACTA
CGGTTCATCCCCGTGCATACGGGGAACAC	GACACCTGTATTGTCTGTAATCGAGAGACTGA
CGGTTCATCCCCGTGCATACGGGGAACAC	CCAATTGTTCCCGTGTATGGTGAGTGGTCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	AAAGAAATCCCTGAACAAGATGCGGTTTACAC
CGGTTCATCCCCGTGCATACGGGGAACAC	AAATATATATAAGAAGTATTGAATTCTGTTTC
CGGTTCATCCCCGTGCATACGGGGAACAC	TTCAATTCAAAATTTTCATCAAGAACAATGGT
CGGTTCATCCCCGTGCATACGGGGAACAC	ATTGACAGTTATATTATGTCTATACTTTTGGC
CGGTTCATCCCCGTGCATACGGGGAACAC

>NZ_CP021852|2|2|510689-511144|CRT
CGATTCATCCCCGTGCATACGGGGAACAC	AAAAGCTATTTGATAGCAACGTAATTGAACTA
CGGTTCATCCCCGTGCATACGGGGAACAC	GACACCTGTATTGTCTGTAATCGAGAGACTGA
CGGTTCATCCCCGTGCATACGGGGAACAC	CCAATTGTTCCCGTGTATGGTGAGTGGTCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	AAAGAAATCCCTGAACAAGATGCGGTTTACAC
CGGTTCATCCCCGTGCATACGGGGAACAC	AAATATATATAAGAAGTATTGAATTCTGTTTC
CGGTTCATCCCCGTGCATACGGGGAACAC	TTCAATTCAAAATTTTCATCAAGAACAATGGT
CGGTTCATCCCCGTGCATACGGGGAACAC	ATTGACAGTTATATTATGTCTATACTTTTGGC
CGGTTCATCCCCGTGCATACGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021852.1\|WP_004248396.1\|515310_515925_+\|thiol:disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|172475
NZ_CP021852.1\|WP_004243724.1\|512858_513302_-\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|238129
NZ_CP021852.1\|WP_017827869.1\|516914_517496_-\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|235677
NZ_CP021852.1\|WP_088206634.1\|507750_510444_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP021852.1\|WP_004243725.1\|513528_514575_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP021852.1\|WP_049199620.1\|515989_516895_+\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|224015
NZ_CP021852.1\|WP_017627993.1\|501842_502139_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP021852.1\|WP_049196924.1\|504489_505524_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP021852.1\|WP_004243731.1\|519165_519657_-\|colicin-V-production-protein	unknown	unknown	gnl\|CDD\|182773
NZ_CP021852.1\|WP_088206631.1\|499997_501221_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|183984
NZ_CP021852.1\|WP_004243721.1\|511274_512531_-\|PTS-ascorbate-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|236502
NZ_CP021852.1\|WP_017827870.1\|517617_519135_-\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236427
NZ_CP021852.1\|WP_017627990.1\|503739_504477_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP021852.1\|WP_012368108.1\|512541_512829_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
NZ_CP021852.1\|WP_049200714.1\|505581_506169_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP021852.1\|WP_088206630.1\|497520_499920_+\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	unknown	unknown	gnl\|CDD\|274418
NZ_CP021852.1\|WP_088206632.1\|503062_503740_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|187858
NZ_CP021852.1\|WP_017627992.1\|502141_503062_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP021852.1\|WP_088206633.1\|506155_507754_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NZ_CP021852.1\|WP_004243726.1\|514571_515114_-\|NUDIX-hydrolase-YfcD	unknown	unknown	gnl\|CDD\|185291

Protein	Function_ID	Function_description	E-value
NZ_CP021852.1\|WP_004248396.1\|515310_515925_+\|thiol:disulfide-oxidoreductase	gnl\|CDD\|172475	PRK13972, PRK13972, GSH-dependent disulfide bond oxidoreductase; Provisional.	7.56791e-96
NZ_CP021852.1\|WP_004243724.1\|512858_513302_-\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	1.30757e-43
NZ_CP021852.1\|WP_017827869.1\|516914_517496_-\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|235677	PRK06029, PRK06029, UbiX family flavin prenyltransferase.	2.10566e-121
NZ_CP021852.1\|WP_088206634.1\|507750_510444_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.72401e-142
NZ_CP021852.1\|WP_004243725.1\|513528_514575_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.10508e-82
NZ_CP021852.1\|WP_049199620.1\|515989_516895_+\|TIGR01777-family-protein	gnl\|CDD\|224015	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].	1.54606e-157
NZ_CP021852.1\|WP_017627993.1\|501842_502139_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.37501e-60
NZ_CP021852.1\|WP_049196924.1\|504489_505524_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	6.50124e-120
NZ_CP021852.1\|WP_004243731.1\|519165_519657_-\|colicin-V-production-protein	gnl\|CDD\|182773	PRK10845, PRK10845, colicin V production protein; Provisional.	1.66712e-99
NZ_CP021852.1\|WP_088206631.1\|499997_501221_-\|alanine-racemase	gnl\|CDD\|183984	PRK13340, PRK13340, alanine racemase; Reviewed.	0
NZ_CP021852.1\|WP_004243721.1\|511274_512531_-\|PTS-ascorbate-transporter-subunit-IIC	gnl\|CDD\|236502	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed.	0
NZ_CP021852.1\|WP_017827870.1\|517617_519135_-\|amidophosphoribosyltransferase	gnl\|CDD\|236427	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional.	0
NZ_CP021852.1\|WP_017627990.1\|503739_504477_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.81256e-48
NZ_CP021852.1\|WP_012368108.1\|512541_512829_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	4.22877e-30
NZ_CP021852.1\|WP_049200714.1\|505581_506169_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.73826e-22
NZ_CP021852.1\|WP_088206630.1\|497520_499920_+\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	gnl\|CDD\|274418	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.	0
NZ_CP021852.1\|WP_088206632.1\|503062_503740_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	8.99639e-57
NZ_CP021852.1\|WP_017627992.1\|502141_503062_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.56752e-144
NZ_CP021852.1\|WP_088206633.1\|506155_507754_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	2.55618e-138
NZ_CP021852.1\|WP_004243726.1\|514571_515114_-\|NUDIX-hydrolase-YfcD	gnl\|CDD\|185291	PRK15393, PRK15393, NUDIX hydrolase YfcD; Provisional.	9.13373e-128

>NZ_CP021852.1|WP_088206634.1|507750_510444_-|CRISPR-associated-helicase/endonuclease-Cas3
MDKDYYSYWGKFKSENNHEYYHLLPYHSLDVAAVGMILFPENSKIIKDISTFLQIHPKEFSKLFLLLLSLHDIGKFSSSFQYINPNIIDKLKVPESRFSYDGNNYRHDRLGYYFWRKIKNTIFSSIIISNADYKERKISDGFWIIFETALGHHGKPINKNNIDESIENYIHKDNDKAAIDFTLDILKLFSPKLSVENFYDKGWKERLKQISWLLAGMVTLSDWIGSNRDYFPYYKKKIPLSEYWFLALNRAKKAVLSSGFNRNYQISPFISVEYHFGYKPTPLQQWAEKVTINEHPQLFILEDTTGSGKTEAALTLAHRLMEVDAADGFYFGLPTQATSNAMFLRIINHYKKIFDEKKEVPSIVLAHSASNMNEQFTKIIRDGNERYNISDNTASAQCYQWLSDSRKKALLATIGVGTLDQALLSMLPRRHQSLRLLGLNRKIIIFDEIHSADEFMFEIIEKLLSTHLHQGGSVILLTATLSLKQRKRIIDSWFNAFDQISPEIESKSFPLATHLTCFPKVIKKEYPLKSRNQVSRKVKVEIINKEEQCIDIIISAINNGNCVVWIRNTVNDAIKSYYDIKKRLSKDNNCLLFHSRFNLKDRKIREEQVLKYFGKNSTAQQRKGTVLIATQVFQESLDADADIMISDICPIDDLIQRSGRLHRHTRTKYGDYTSETIDKRRPPILYVHAPLFIETPSSCWLTEQFSSTETVYRSPGRLWLTLRSLTRLGEINMPKDARQLIESVYSDNAYNEIPQSLIQKENNDIGEKKARVSKAKIQLLKINKGYSEESSEFWTEDHYDISTRYSDIEMVNILLLKKIKDNYVPWIEDSHFSIALSTVKISKKKYADKLVSVPQEVIDTINKQYPQARYLQLWIPDEDQYYQYDHLIGFCERQELS
>NZ_CP021852.1|WP_088206633.1|506155_507754_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNIINQPWLPFRFRDGEIKTLPISAISHPDIIDFSLNRADFKGAAYQFAIGLLQTIFAPEDEDEWEEYFETPPSSKKLQSAFDKVAHAFNIMGDGPLFMQDFSTLEEQKNIPIAQLLIDAPGENGIKQNTDHFIKQGIADVMSLEMAVLALFTLQINAPSGGKGHLVSLRGGGPLTTLVYPAEENSTLWQKLWLNVINREFWEYDEPNFDDGSVFPWLIPLNLKEGKGEKVSPDDVHPLYMYWAMPRRIRLKVENKSVTCQISDMKSNFSVKYYVTKNYGLDYQEGWLHPLTPYYWDPKKPEMFPNSIKGRQGGIHYNLWDRLFLSSNENGQKSATVVSHYLKLYQLLEFTRKPRLLIFGYDMDNMKPRGWYNLEMPIFHVKDEYNNKIINEIKIIQKLTIDCLKSVKEQVKKAWFSSPKDMKGDISFIDLTFWQRSENIFFEVVQNIIVQIQKNDFLTHEQAKKWLNSIRKISISIFDEYALSALGTQKSVSGCIKARNGLIKDLYSNKRIKKFAEDFKITKENGEQYGIL
>NZ_CP021852.1|WP_049200714.1|505581_506169_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MGSYKSKNITLYNYPELKINVLRWWESLFLSPNELSKKGILPAPNRYKSELKRCDSITAIMLTEGFRALWLSFPVDLINNATTEDIERWATIVAILVYITQDSEKHFATIAGEKDESKKSCISESRFLQLQSSRTYDEFIRRLRRILIQIKGKSSVLSMCKDIEKWVLEKQRFSSIQTNKQIIIEWAMKYYQAAI
>NZ_CP021852.1|WP_049196924.1|504489_505524_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSQFIQLHILTSYAPSNLNRDDLGRPKTAIMGGFERLRISSQSLKRHWRTSELFNIALSGNIGIRTKKFGLQLYDALIEGGVSEKNAKNWVGLIIEQYGKIKKDSIETEQLVHISHLEKSLAFDLINLLIKEQREPTKQELESLKTINTSVDIALFGRMLASAPKYNIEAACQVAHAISVHSTVIEDDYFTAVDDLNNGETDTGSAHIGEAGFAAALFYSYICINKTQLIESLDGNEELANKAIQALTEVAIKVSPTGKQNSFASRAYASYVLAEKGSYQPRSLSVAFLKPIDDEDMENAAINALKFRMENFDKVYGTCAESRYQLNAVQGEGSLSGLLQFVAE
>NZ_CP021852.1|WP_017627990.1|503739_504477_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MAQYLVFRLYGPLASWGLPAVGGDRQTGIAPSRSAILGLLSASLGINRKDESKLLQLQQSVLVATKQLVPSMLLRDFHTAQVPSKRKNITHPTRRSELAEKDQNTILSSRDYRCDAIWIIAIKLTGHSQYTLEQLKNALLKPVYILSLGRKSCPLSLPMMPKIVEVEQLKEALDTQFPYITTSDKADSYWFHSDGWVTYFWEGNYQDIKGENIMTLYPWDDPINRQHWQFRQRKMYQMSVKRESE
>NZ_CP021852.1|WP_088206632.1|503062_503740_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRISIDYSADYLHSLLANKLPDGYTIHQLLWRLFTEEKERSFLYRLEIGKNGKPIFYILSSIAPTTKNNIFKIETKPFLPKLVKKMKLAFSLRANPTVCITDKEGKRHRHDVLMHAKKQAQLDGKDYSHDDIHHLMQQAALNWISSDDRLNKWGISLTQLPDIKAYTPERIKKPSGKIMSFSSVDYQGVLTIEEPHLFWQQYQQGFGRAKAFGCGLMLIRNI
>NZ_CP021852.1|WP_017627992.1|502141_503062_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MAFIPLRPIPIKDRHSMIFIGMGRIDVKDGAFVVIDEINGERMLIPVGSLACILLEPGTRISHAAVKLAATVGTLLIWVGEAGVRLYSVGQPGGARSDKLLYQAKLALDNDLRLKVVRKMFELRFGESAPLKRSVDQLRGIEGARVRKQYQMLAKKFKIDWKGRRYDPKDWEAGDIINRCISAATACLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPVAFKVASYKAIAPDREVRIACREAFRKYQTLNKLIPLIEEVLSAGEITPPEPPIDAQPPAIPQAHPFGDEGHREK
>NZ_CP021852.1|WP_017627993.1|501842_502139_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMIVVVTEAVPPRLRGRLAVWLLEVRAGVYVGNVSARIREMIWQQINEFAEDGNVVMAWGTNTESGFDFQTYGENRREPIDFDGLRLVLFKPYKEDV
>NZ_CP021852.1|WP_088206631.1|499997_501221_-|alanine-racemase
MSLAIRYLALLPLFVITACQQPVNYNPPATQVAQAQPAIVNNSWIEISRSALDFNVKKVQSLLGKQSSLCAVLKGDAYGHDLSLVAPIMIENNVQCIGVTNNQELKEVRDLGFKGRLMRVRNATEQEMAQATNYNVEELIGDLDMAKRLDAIAKQQNKVIPIHLALNSGGMSRNGLEVDNKSGLEKAKQISQLANLKVVGIMSHYPEEDANKVREDLARFKQQSQQVLEVMGLERNNVTLHMANTFATITVPESWLDMVRVGGIFYGDTIASTDYKRVMTFKSNIASINYYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSNAGHALIAGQRVPVLGKTSMNTIMVDITSLNNIKPGDEVVFFGKQGNSEITAEEIEDISGALFTEMSILWGATNQRVLVD
>NZ_CP021852.1|WP_088206630.1|497520_499920_+|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family
MKISHFYRWIVFIILTILALYFTVLGGYLVSLAGSPFYLFTGVMLLIIAACFLSRRKSTLLLFNFLFLITIVWSIWESGFDFWALAPRLDIIFILGLLLIPFTLNNNVYTCRTNKIGLFTLLATTLIIILGSSLTDPHAINGQFTQQQPTNSISPIGVNDNDWPAYGRTQAGIRYSPLTQINSDNVDKLVEKWTFHTGDEKRANDAVEITNEVTPIKIEDNLFLCTPHQYLISLDPATGKEKWRFDSKLQYNKSFQHMTCRGVAYYNQNNSAEFAKSLDVRQPSISDECPEKVFLPVNDGRLIAVNAQTGNACRDFGQNGEINLLASMPYAYLGGYNPTSPPIITGNTIIIGGSVTDNLSTQEPSGVIRGYDVNSGKLIWVFDTGAEDPNAMPGKETQFVHNSPNAWAPLAYDAQTDVVYIPTGVGTPDIWGGDRHPLKERYANSVLALKGSTGELLWHFQTTHHDLWDMDVPSQPSLVDIKTDKNETIPAIYIVTKTGNVFVLDRRDGTPIVPVTEKPVPTSVKYGPQTQGEHYSPTQPFSALNLAPKNKLQGSDMWGGTMADQLLCRIAFHQLNYEGIYTPPSENGTLVFPGNLGIFEWGGISVNQDRQVAVMNFITLPFISKLYLKDPQDSQAIDAGHGEQGLQPMTGTPYSVDIHPFLSPLGLPCKQPPWGFVAGVDLTKNELVWQQRFGTIRDSLPNLVELPPLKIGVPGLGGAISTAGNVMFVAASQDNYIRAFNVTNGKMLWEARLPAGGQATPMTYSIGGKQYVVIMAGGHGSFGTKMGDSLVAYGLPDNL
>NZ_CP021852.1|WP_004243721.1|511274_512531_-|PTS-ascorbate-transporter-subunit-IIC
MDFFRFLMSDVLSEPAILVGLIALIGLIAQKKPATECIKGTVKTIMGFVILGAGAGLVINSLGDFSTIFQHAFGIQGVVPNNEAIVSIAQKSFGKEMALIMFFAMLINILIARLTPWKYIFLTGHHTLFMSMMVAVILATAGLEGAVLVAVGSLVVGVSMVFFPAIAHPYMKKITGSDDVALGHFSTISYVVSGFIGSKFGNKAHSTEEMNVPKSLLFLRDTPVAIAFTMGIIFIITCLFAGDTFVREVSGGKNWFMFSLMQSITFAAGVYIILQGVRMVIAEIVPAFKGISDKLVPNAKPALDCPVVFPYAPNAVLVGFLSSFAAGVIGMFILYALDWTVIIPGVVPHFFVGATAGVFGNATGGRRGAILGAFAQGLLITFLPVFLLPVLGDIGIANTTFSDADFGVIGILLGIIVR
>NZ_CP021852.1|WP_012368108.1|512541_512829_-|PTS-sugar-transporter-subunit-IIB
MKITVVCGNGLGSSLMMEMSIKSILKDLAVNADVDHVDLGSAKGTPSDIYVGTRDIAEQLNAQAVNGKIVSLDNMIDKVAMKEKLSTALRELGAL
>NZ_CP021852.1|WP_004243724.1|512858_513302_-|PTS-sugar-transporter-subunit-IIA
MLKTLLTPDVVQVIPQVKDWREAIKIACQPLIDKGCIEPRYVDAIYKSHEQIGPYYVLGPGIAMPHARPEEGVNQLSLALTIIEKGVEFGADENDPVKLLIVLAATDNDSHINAIVKLAELFDNQDDIDTLLQAKSKAEVLAVINHY
>NZ_CP021852.1|WP_004243725.1|513528_514575_+|LacI-family-transcriptional-regulator
MIKTRKRRNTGRVTLQEVAKHAGVGSMTVSRALRTPELVSDKLREKVNQAVAELGYIPNASAGALASAQSHIIAVLLPSFTDKASADFMQSLQQILSRHHYQILVGCYEYQLHKATDVINMLLQSNPAALVAFGSQLSDVQFLHISNANVPVVSVASQSNEQSAISIDCGYEKAAFDLTHYLIQQGKRCVGYVGALQGQRLHHQQITGWSRALLKNYLNAEQSVTTPDPASMAYGRQALTEILLRQPELDAVICSHESIALGMMFECQRRLIKIPQDLAIACLEGSENSAQIAPSLTSIHFNYHKIGKEAGKHLIALLQHLRDEVDNAMFENTVINYAYRLELGQSTP
>NZ_CP021852.1|WP_004243726.1|514571_515114_-|NUDIX-hydrolase-YfcD
MEQENTAVVEWVDIVDEKNEVVAQATRQQMRAENLRHRATYIVVHDGMGKILAQRRTETKDFYPGWLDATAGGVVQQGENALESARREAEEELGIAGVPFAEHGQFYYDDESCRVWGSLFSCVSHGPFALQPEEIEEVCWLTPLEITERCDEFTPDSLKALSLWLTRNNSTRLDTKETTD
>NZ_CP021852.1|WP_004248396.1|515310_515925_+|thiol:disulfide-oxidoreductase
MIDLYYANTPNGQKITLFLEEVAMPYTLHHVDIGKGDQFKPEFLAISPNNKIPAIVDNAPADGGEPLSIFESGAILIYLAEKSGRLLSHDLREKMTQLQWLFWQVGGFGPMLGQNHHFTRYAPEKVPYAINRYTKETERLYQVLESRLAQSPYLGGNDYSIADIATYTWARYHDTHHIDLADYPAVEKWLNTISQRPAAKKLFG
>NZ_CP021852.1|WP_049199620.1|515989_516895_+|TIGR01777-family-protein
MNILITGGTGLIGRALICQLALDKHNITVLSRSPQKVYSHFCNEMACWTHLDDKENLNQFDAVINLAGEPIADKRWTPEQKQTLVNSRCKLTQKLVDLIKASDSPPSVLISGSAVGFYGDQGENNVTEETPPKDEFTHQLCAKWENIALDAQTPLTRVCLLRTGIVLSTKGGALPKMSPPFKLGLGGKLGNGKQYMPWIHIDDMVNAIVFLLNDNNTQGAFNLTAPHPVQNKAFTTTLAHVLKRPAFMTVPATILKLMMGESATLVLGGQQAFPKKLLDAGFSFRYPQLEGALEDIIRHKK
>NZ_CP021852.1|WP_017827869.1|516914_517496_-|UbiX-family-flavin-prenyltransferase
MKKLIVGLTGASGAIYGIRLLEILKSVPSVETHLVISQAARRTISLETDYSLKDIHALADIIYDDRDIGATISSGSFRVNGMVILPCSIKSLSGIVHSYTDTLVTRAADVVLKEGRKLVLCVRETPLHLGHLRLMTQAAELGAIIMPPVPAFYFQPKTIDDIVNQTVNRVLDQFDIDLPDDLFQRWQGDKPAR
>NZ_CP021852.1|WP_017827870.1|517617_519135_-|amidophosphoribosyltransferase
MCGIVGIAGVNPVNQSIYDALTVLQHRGQDAAGIATIDENNGFRLRKANGLVKDVFETRHMLRLKGTIGIGHVRYPTAGSSSASEAQPFYVNSPFGITLAHNGNLTNAHLLRRQLFETARRHINTTSDSEILLNVLAYELDRFDHFPLEPDNIFTAVAAMHKKLRGAYACVALIIGHGLLAFRDPYGIRPLVLGKRTLEDGRSEYMVASESVALDTLGFEFLRDVAPGEAVYITEQGQLFTRQCAENPQLVPCLFEYVYFARPDSFIDKISVYNARLRMGQKLGAKIAKEWEELQIDVVIPIPETSCDIALEIAHILNKPYRQGFVKNRYVGRTFIMPGQQERRKSVRRKLNANRAEFRDKNVLLIDDSIVRGTTSEQIVELAREAGAKKVYFASAAPEVRFPNVYGIDMPNANELIAHGREVDEIRKLIGADGLIFQDLSDLIAAVQEENPDINQFECSVFDGVYITKDIDQGYLDYLENLRRDDEHKIRDQHEAENLEIYNEG
>NZ_CP021852.1|WP_004243731.1|519165_519657_-|colicin-V-production-protein
MVWIDYAIIAIIGFSALVSLIRGFVREALSLITWGCGFFVASQFYPYLAVYFTRFEDELVRNGIAIVTLFIATLIVGAVINYVISSLVQRTGLSGTDRVLGICFGALRGVLIVSALLFVLGAFTPMADSADWQRSELIPQFNHIIRWFFDYLQNASSFVSEKM

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Crispr_ID: NZ_CP021852_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021852_3

1748458-1748539

TypeV-U4

Consensus_repeat	Method
CTTGTTCAGCTTCAAGTTGCGCTTGACG	CRISPRCasFinder

1 spacers

c2c9_V-U4

The CRISPR arrays of NZ_CP021852_3

>merge|NZ_CP021852|3|1748458-1748539|CRISPRCasFinder
CTTGTTCAGCTTCAAGTTGCGCTTGACGCTGGGCTTCTTCTTCAGCTAAACGCACTTGTTCAGCTTCTAGTTGCGCTTGACG

>NZ_CP021852|3|3|1748458-1748539|CRISPRCasFinder
CTTGTTCAGCTTCAAGTTGCGCTTGACG	CTGGGCTTCTTCTTCAGCTAAACGCA
CTTGTTCAGCTTCTAGTTGCGCTTGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021852.1\|WP_004245395.1\|1756851_1757991_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|380145
NZ_CP021852.1\|WP_004248875.1\|1750417_1751044_+\|lysoplasmalogenase	unknown	unknown	gnl\|CDD\|226237
NZ_CP021852.1\|WP_004245397.1\|1760450_1760705_-\|sulfurtransferase-TusA	unknown	unknown	gnl\|CDD\|178967
NZ_CP021852.1\|WP_049219518.1\|1742653_1743796_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP021852.1\|WP_088206847.1\|1742255_1742672_+\|aspartate-1-decarboxylase-autocleavage-activator-PanM	unknown	unknown	gnl\|CDD\|372195
NZ_CP021852.1\|WP_088206850.1\|1753691_1756826_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
NZ_CP021852.1\|WP_088206852.1\|1760014_1760383_+\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_CP021852.1\|WP_017827656.1\|1749866_1750271_-\|DUF2500-domain-containing-protein	unknown	unknown	gnl\|CDD\|378475
NZ_CP021852.1\|WP_088206846.1\|1741056_1742244_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341027
NZ_CP021852.1\|WP_004252744.1\|1748907_1749492_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase	unknown	unknown	gnl\|CDD\|236793
NZ_CP021852.1\|WP_004248885.1\|1738090_1739185_+\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
NZ_CP021852.1\|WP_004248880.1\|1745086_1746064_-\|cell-division-protein-FtsX	unknown	unknown	gnl\|CDD\|182910
NZ_CP021852.1\|WP_088206848.1\|1743890_1744745_-\|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl\|CDD\|235838
NZ_CP021852.1\|WP_012368825.1\|1737240_1738089_+\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpE	unknown	unknown	gnl\|CDD\|182875
NZ_CP021852.1\|WP_004248877.1\|1749509_1749803_+\|DUF1145-family-protein	unknown	unknown	gnl\|CDD\|182831
NZ_CP021852.1\|WP_004248874.1\|1751214_1753605_+\|zinc/cadmium/mercury/lead-transporting-ATPase	unknown	unknown	gnl\|CDD\|236827
NZ_CP021852.1\|WP_004248884.1\|1740466_1740943_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP021852.1\|WP_088206851.1\|1758734_1759943_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	gnl\|CDD\|223747
NZ_CP021852.1\|WP_004245385.1\|1746056_1746722_-\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|182829
NZ_CP021852.1\|WP_088206845.1\|1739674_1740427_+\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|320693

Protein	Function_ID	Function_description	E-value
NZ_CP021852.1\|WP_004245395.1\|1756851_1757991_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|380145	NF000247, MexA, MexA family multidrug efflux RND transporter periplasmic adaptor subunit.	1.06899e-101
NZ_CP021852.1\|WP_004248875.1\|1750417_1751044_+\|lysoplasmalogenase	gnl\|CDD\|226237	COG3714, COG3714, Predicted membrane protein [Function unknown].	4.42204e-27
NZ_CP021852.1\|WP_004245397.1\|1760450_1760705_-\|sulfurtransferase-TusA	gnl\|CDD\|178967	PRK00299, PRK00299, sulfurtransferase TusA.	6.78079e-50
NZ_CP021852.1\|WP_049219518.1\|1742653_1743796_-\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	0
NZ_CP021852.1\|WP_088206847.1\|1742255_1742672_+\|aspartate-1-decarboxylase-autocleavage-activator-PanM	gnl\|CDD\|372195	pfam12568, DUF3749, Acetyltransferase (GNAT) domain. This domain family is found in bacteria, and is approximately 40 amino acids in length. The proteins in this family are acetyltransferases of the GNAT family.	6.31164e-59
NZ_CP021852.1\|WP_088206850.1\|1753691_1756826_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NZ_CP021852.1\|WP_088206852.1\|1760014_1760383_+\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	3.11159e-50
NZ_CP021852.1\|WP_017827656.1\|1749866_1750271_-\|DUF2500-domain-containing-protein	gnl\|CDD\|378475	pfam10694, DUF2500, Protein of unknown function (DUF2500). The members of this family are largely confined to the Gammaproteobacteria. The function is not known.	6.66006e-24
NZ_CP021852.1\|WP_088206846.1\|1741056_1742244_+\|MFS-transporter	gnl\|CDD\|341027	cd17474, MFS_YfmO_like, Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily. This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.58757e-83
NZ_CP021852.1\|WP_004252744.1\|1748907_1749492_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase	gnl\|CDD\|236793	PRK10909, rsmD, 16S rRNA m(2)G966-methyltransferase; Provisional.	1.26083e-120
NZ_CP021852.1\|WP_004248885.1\|1738090_1739185_+\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
NZ_CP021852.1\|WP_004248880.1\|1745086_1746064_-\|cell-division-protein-FtsX	gnl\|CDD\|182910	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional.	0
NZ_CP021852.1\|WP_088206848.1\|1743890_1744745_-\|RNA-polymerase-sigma-factor-RpoH	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	0
NZ_CP021852.1\|WP_012368825.1\|1737240_1738089_+\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpE	gnl\|CDD\|182875	PRK10973, PRK10973, sn-glycerol-3-phosphate ABC transporter permease UgpE.	8.31099e-118
NZ_CP021852.1\|WP_004248877.1\|1749509_1749803_+\|DUF1145-family-protein	gnl\|CDD\|182831	PRK10910, PRK10910, DUF1145 family protein.	5.10324e-40
NZ_CP021852.1\|WP_004248874.1\|1751214_1753605_+\|zinc/cadmium/mercury/lead-transporting-ATPase	gnl\|CDD\|236827	PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional.	0
NZ_CP021852.1\|WP_004248884.1\|1740466_1740943_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	6.54093e-10
NZ_CP021852.1\|WP_088206851.1\|1758734_1759943_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.3912e-57
NZ_CP021852.1\|WP_004245385.1\|1746056_1746722_-\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|182829	PRK10908, PRK10908, cell division ATP-binding protein FtsE.	3.71633e-161
NZ_CP021852.1\|WP_088206845.1\|1739674_1740427_+\|M48-family-metallopeptidase	gnl\|CDD\|320693	cd07334, M48C_loiP_like, Peptidase M48C Ste24p loiP-like, integral membrane protein. This subfamily contains peptidase M48 Ste24p protease loiP (formerly yggG)-like family are mostly uncharacterized proteins that include E. coli loiP and ycaLG, considered to be putative metallopeptidases, containing a zinc-binding motif, HEXXH, and a COOH-terminal ER retrieval signal (KKXX). They proteolytically remove the C-terminal three residues of farnesylated proteins. They are integral membrane proteins associated with the endoplasmic reticulum and golgi, binding one zinc ion per subunit. In eukaryotes, Ste24p is required for the first NH2-terminal proteolytic processing event within the a-factor precursor, which takes place after COOH-terminal CAAX modification (C is cysteine; A is usually aliphatic; X is one of several amino acids) is complete. Mutation studies have shown that the HEXXH protease motif, which is extracellular but adjacent to a transmembrane domain and therefore close to the membrane surface, is critical for Ste24p activity. LoiP has been shown to be a metallopeptidase that cleaves its targets preferentially between Phe-Phe residues. It is upregulated when bacteria are subjected to media of low osmolarity, thus yggG was named LoiP (low osmolarity induced protease). Proper membrane localization of LoiP may depend on YfgC, another putative metalloprotease in this subfamily.	3.38494e-111

>NZ_CP021852.1|WP_004245385.1|1746056_1746722_-|cell-division-ATP-binding-protein-FtsE
MIRFEHVSKAYLGGRQALQGVDFHLRPGEMAFLTGHSGAGKSTLLKLICGIERPSDGAIWFAGHDISRLKNSEIPFLRRQIGMIFQDHHLLMDRTVYDNVSLPLIIAGASEEDIRRRVSAALDKVGLLDKAKNYPIQLSGGEQQRVGIARAVVNKPTVLLADEPTGNLDGELSEGIMRLFEEFNRVGVTVLMATHDMTLVERRNYRILTLGQGRMVGGQNG
>NZ_CP021852.1|WP_004248880.1|1745086_1746064_-|cell-division-protein-FtsX
MAKGKHSRKAMPTPKAKTKALRGGRREQWRYAWRNTMADFLRQPLSSFLTVMVVAISLTLPSICYIVWKNVSTAAEQWYPTPQLTVYLDKSLDDSLAQATIKNIEALDKVEEVNYLSRQDSLVEFRSWSGFSSALDMLEENPLPAVAIVTPVMDPNDEQLMVNLRDAVANIAGVDEVRMDDSWFTRLSTLTSLVGQIAMVIGSLMIVALLLVIGNSVRLNIFSRRDTINVMKLIGATDGFIMRPFLNWGLVLGFIGAIFAIIFSALLVWKLSDVVTQAATVFGTTFSISGLGFDESVILILVSMTIGWFAAWLTTMQHLRQFTPE
>NZ_CP021852.1|WP_088206848.1|1743890_1744745_-|RNA-polymerase-sigma-factor-RpoH
MTKEMQSLALVPQGSIEAYIRAANSYPMLTAEEEKELAERLHYEGDLEAAKTLILSHLRFVIHVARSYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKSQRKLFFNLRKNKKRLGWFNQDEVELVAKELGVSESDVREMESRMSAQDMAFDMSADDSDDPHPVAPVLFLEDKSSDFADGIEEDNWDNHAADRLTLAIKTLDERSQDIIRARWLEDDNKSTLQELADKYGVSAERVRQLEKNAMKKLRLAIED
>NZ_CP021852.1|WP_049219518.1|1742653_1743796_-|glycerate-kinase
MKEIKIVIAPDPFKESLSAKEVAEAIKQGFSRYLPDADYCCIPMADGGEGTVTSLVDATHGRFITTPVCDPLGKQVTATWGVLGDNTTAVIEMAQASGLHLIPSSQRNPNLTTSYGTGELICAALDLGVKKIILGLGGSATNDGGAGMMQALGLGLKDKSGTSLPFGGHALSQLHSIDINQLHPKLASVDIEIACDVTNPLCGELGASKVFGPQKGATEQDIEQLDSALHHFGTYLEKMTQRTLINIAGSGAAGGLALPLLAFTQATLSPGIDLVANAVELEKQLIDADLVITGEGRMDSQSAQGKTPIGVAKLAKKYHRPVIALVGGYLPDYDVVHQQGIDAVFSIMPGVATLQQAFDNAEQNLQETAYNVARLYALSL
>NZ_CP021852.1|WP_088206847.1|1742255_1742672_+|aspartate-1-decarboxylase-autocleavage-activator-PanM
MKLTIEKLPQLSAQDKIDLGKIWQDSKYQMALTAPITTEHALFVARFNGRLLAACRIKYRAKTALISDFMVREVTRRRGVGHYLLTQCLEKSPTITHWQALLKKGQINDPVAQAFLAHHHFATSLQADTYDYFYNDKA
>NZ_CP021852.1|WP_088206846.1|1741056_1742244_+|MFS-transporter
MKLSIRSLFYLVCFSALLGSLAQNIYTPVLPLIQQQFNTTLSLVNLTVSAFTFAMAVMQLCYGSLIDKWGRKPILLSGLTISIIGALICIWANSINLLIFGRVIQAIGIAAIPVVAATILGDLYQGNERAKAMGSYQMLLALAPASGPLLGGYLAQHYHYQSIFVFLSIVGLVLLIAHLFYLPETRPEQKQSVKSLSAMRQVLAAPEGKSVFVISFMVFYNYFCLLVFLPLIAFHLYHLNSSEIGGLYVPMSIALVLGSYLYRKVCHLFSAEYGVIITSCINLAMLSLFALFWQISLPIMLILTVLYGLSLGLTMPTHTTLLTSHFSSVRATAMGIYNFIRYCGMAAGPMVASYFVTDNHYQYVFYSCVILTSLALCFAIKTLLSTLKQQRQTTD
>NZ_CP021852.1|WP_004248884.1|1740466_1740943_-|MarR-family-transcriptional-regulator
MTKQQVTTQELLNGLSELLHLKEANNDEGHKKVLAEKGLENYSLTELHVIHCIGEESMRNLTTISDYMAMTRGAVSKICRRLQSKGAIEKIKLADNQKEIFFILTTEGEKLFHTHELLHQQSQAKWITLFEQYDQNERLAIKRFLADVANRFRHKEKA
>NZ_CP021852.1|WP_088206845.1|1739674_1740427_+|M48-family-metallopeptidase
MKIKLLATVMVSTALLSGCKNLDTSMLAQSGTQLFQAATLSDDDVKALTNDACKEMDAKNKIAPANSNYTKRLNNIAKALGNEVNGTQVNYKVYLTKDVNAWAMANGCVRVYSGLMDIMTDNEVEGVLGHEMGHVALGHTRKAIQVAHATVAARTAASSAGGVAAQLSSSQLAEMGEKLVNAQFSQHQETQADNFSYDLLKKRGINTSGLVTGFEKLAKLGGSDSSMFDSHPPSKERADNIRNRIAEDKK
>NZ_CP021852.1|WP_004248885.1|1738090_1739185_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MTTVTLTNLEKRYPNGYQAISTLNLSIEQGEMVVLVGPSGCGKSTLLRMIAGLETITDGDLLIDNRRVNEHEPSERDIAMVFQNYALYPHMSVYDNMAYGLRNRKVPKAEIIARVDRAAHMLEISHLLDRKPKELSGGQRQRVAMGRAIVRDPKVFLFDEPLSNLDAKLRVQMRLEIKKLQQKLATTSVYVTHDQVEAMTLADKLVVLNQGHIEQVGSPLEIYESPASVFVATFMGSPAMNILTTHINRGIIEIADGHLAISAHSLPNGEIQLGLRPEHLLINQQNPLFHANVDFIEALGADVLIYATTCDQQSIVIRAANDHGVNVGNRIGVAIYPENLHFFDRQTQKRIERPTMLLSERLVS
>NZ_CP021852.1|WP_012368825.1|1737240_1738089_+|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpE
MVERRPLFHAFCHLILIVGILSVAFPVWIAVVATTHQNTEFATGSPLWFGQEGIEVFKTLFSSAGTTQNSAITINGMLLNSLVMALVITIGKLVISIASAYAVVFFRFPGRMLAFWTIFFTLMLPVEVRIMPTFEVVTNLNMLNSYAGLTIPLIASATATFLFRQFFLTITPELIEAAKIDGAGPIKFFFTILLPLSRTNIAALFVITFIYGWNQYLWPMLITTDTQYYTIVMGIKQMVAVSDGVIEWNKIMATTLIAMLPPVFIVILMQRAFVKGFVDTEK
>NZ_CP021852.1|WP_004252744.1|1748907_1749492_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase
MAKKPQKTPMGQIRIIGGKWRGRKLPVLDSQGLRPTTDRVKETLFNWLMPVIQDARCLDCFAGSGGLGIEALSRYAKETTFIEFDRKVAQQITANLALLGADNGHVIQDSALNYLAKQGTAYDVVFLDPPFHQGMLANTLQLLENNQWLAEGCYIYIEEEVNAQVYSLPENWRLHREKIAGQVAYRLYIRNLSA
>NZ_CP021852.1|WP_004248877.1|1749509_1749803_+|DUF1145-family-protein
MLIFLGRFLMIGVWGFLCLNLISPFPKPLKYFMDIALIFMVIMHGLQIAMYKAGQPEDKKPSGLLQFKIFFFGIFELLRIQKELRKEYLEKQKNKNQ
>NZ_CP021852.1|WP_017827656.1|1749866_1750271_-|DUF2500-domain-containing-protein
MSVMNKAGMLGIAVLIIIIASATYRFFEQRKQRISDDNSPVKLYMVEVVDKQQIPKNDRRSRENDVNGPETTYYYQVTFRLTTDSQQDIILRVDKTTFSNVALEMKGRLFMQGSRFVQFETDAPDNESGKTSTK
>NZ_CP021852.1|WP_004248875.1|1750417_1751044_+|lysoplasmalogenase
MSWPFLAVLFSGWLYIDAAYRGPNWQRWLFRPITLLLLLLWAWQVPEHSINSYLIVGALLATLLSDVLKMFEGKYLLPSLALLFLSYILYLISFALPLQISFYLPLLGFVIVAAIIVLAIIWTKLDKFAIPVLLTLLAAFAMFWVAGEKFFYLSNDYNFSIMIGSLLLVIAYSIWLINRFRFSFSASKGLVSACYFIGHFFIVRALFL
>NZ_CP021852.1|WP_004248874.1|1751214_1753605_+|zinc/cadmium/mercury/lead-transporting-ATPase
MSKHAHQHDNHKHTDACCSSSQCCSNQADNSSMHSHTESGHTHSKIDKSDPECEEEHHHGHQHEHNHHAHDGHDHAHGCCDSNAPVSNVEPEKIAQQRFSWKVQGMDCPSCAQKIETAVLKVVGVKQAKILFATEKLVVDADTDLRTDVISAVKSAGFELFDISSAGSQPPAKQSLLKESSFVIILAILMAISWGAEFIDPQAGRAAFIATTLIGLFPIVKKSLRLIRSGTPFAIETLMSVAAIGALFINATEEAAMVILLFMIGEMLESYAAGRARRGVSALMALVPEEAVVIKEGKKQTVPVAQLRPGDIIEIAPGARLPTDAELITAFASFDESALTGESVPVERLQGEKVAAGCLSVDRSVQMKVVSEQGQNAIDRILQLIEEAEERKAPIERFVDRFSRYYTPLIMLFSALVIIIPPLLFAQPWETWFYRGLTLLLIGCPCALVISTPAAITSALAAATKRGALIKGGAALEQLGTVNTVALDKTGTLTEGKPQVTDVIANVGFNEKELLMLASSVEVGSHHPLAKAIINKAQEQQIDVVEADNRKALAGKGIEGYLNNQHILVSAPTQLSETTPLSAQWQQQVARLEDEGKTVVVVLKEDQFIGVIAMQDTLRNDAIESMKVLKSMNINAVMLTGDNPRAAAAIAQKLGMDFRAGLLPEDKVTSVMEISQTHNTMMVGDGINDAPAMKAATIGVAMGSGTDVALETADAALTHNRLTGLPEIIQLSRATRKIIRENITIALGLKAIFLVTSLFGITGLWVAVLADSGATALVTANAVRLLKVKLKSPHQD
>NZ_CP021852.1|WP_088206850.1|1753691_1756826_-|efflux-RND-transporter-permease-subunit
MSRFFINRPILSWVMAIVIMIAGGLSLIKLPVSQYPEIAAPAIMITAVYPGASAETVQDTVVQVIEQELSGLDGFRYLSSNSNTDGSFEVIATFEQGTDSDIALMQVQNKLQLATPKLPLEVQRQGMRVVKFQINFMQVVALVDESGKLDAFDLGNYLASHMKDPISRIDGMGDILLLGSPRAMRIWLDPDKLTNYHLMPQDIAAAIQDENVQVSAGQLAGLPALKGVELNATITSSSRMVSVDEFNHILLKVNLDGSQVLLQDVAKVEVGADNFSISSLYNGKPSAGMAMRLAPGANLLDVSKKVKEVVEAQSQFFPQGVKALFPYETTPSVKSSISSVVRTIVEASILVFLVMFLFLQNIRATLVPTLAIPVVLLGTFGVLAALGLTINVLTMYAMVLAIGLLVDDAIVVVENVERIMHEQAISVKEATILSMTQIQGALVGIGLVLSAVFVPMAFFGGSAGIIYRQFAATIVVAMALSVLIALTFTPALCASILKKPQPKVKKRRGFFWLFNRFFDRGTNYYEKGVRNILYRRGRYMFIFLIITVGTGWLFTQLPKAFLPNEDQGVVMIEVRMPANSTAERMEQTMAEFRDYLLTEEKHLVKTVFTVNGFNFAGRGQNAGMAFVNLADWSERKGKGEDVFSLVARAQQHFNSIRDGMVIAFPPPAIMEMGNAMGFDFYLQDNAGLGHTELVKARDKFLELAAQSPVLTNVRPNGKNDEPQLRVVIDKERARALQLRLSDINDTLSAAWGSMYVNDFIDEGRVKRVYLQGEASARMLPTDLDKWHVRNQRGEMIPFNAFATTQWYMGPPKLERFNGLSAIEILGEPAPGYSTGDAMLAIADIMKQLPSEISLSYSGLSYEEIQTQDQAPALYVMTILFVFLSLAALYESWSVPFSVALVVPFGILGAVIATLLRGLSSDVYFQIGLMTTIGLSAKNAILIVEFAKHLYEKDGKPLIDAAAEAARMRLRPIIMTSLAFTFGVLPMALASGAGQGSQHSVATGVIGGMLASTFLAIFFVPLFYVFVVKLFSRKKAHVSIEEIDK
>NZ_CP021852.1|WP_004245395.1|1756851_1757991_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MKKTKHLFKTKGCNIPFTSVMMVSFVLMGCNDQSTQPTKPAIPEVGVYTVKEEILPLTVDLPARTASYRVSQVRPQVDGILEKRLFTEGSDVKKDQPLYQIDKKPYETQVAKAQAAYDNVKKLAARYKSLRATNAISQQEYDDVVSRLDQAKADLNQAKINLGYTQVLSPISGKISRSFVSEGALVSSGQSQPLATITQLDPIYVDITQPITNQLKLKSLIQQGVVTDSEDKMDVTLFLEDGSQYPYTGTLSFSEVQVEPSTGSVTLRAKFPNPQHQLLPGMYTKARIMQGTQEKAIVVPQQAITFDARGKSITYIVDQQQVLQARDVEILKPQGNGWIIKQGLQAGDRIMTEGHHRAKPGVKVNAVPANNISLKTTLE
>NZ_CP021852.1|WP_088206851.1|1758734_1759943_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MKRLQAFKFQLRPNGQQEREMRRFAGACRFVFNRALARQNEDHEAGNKYIPYTKMASWLIEWKSDTETQWLKEAPSQPLQQSLKDLERAYKNFFQQRTAFPRFKKRGKNEAFRYPQGVKLDQSNSRISLPKLGWMRYRNSREVVGEVRNVTVSQSCGKWYVSIQTEYEATEPQHESTSIVGLDAGVTKLATLSDGTVYPPVSSFKVNQRKLARLQRKLSRKIKFSANWQKQKRKIQRLHSHIANIRKDYLHKVTSEISKNHAMIVIEDLKVSNMSKSAKGTTERYGRNVKAKSGLNRAILEQGWYEMRRQLEYKQLWRGGQVLAIPPAYTSQKCACCGHTAKENRPSQSQFECLECGYTANADINGARNILAAGHAVLASGGRVQSDRPSKQEPAEVIQTSV
>NZ_CP021852.1|WP_088206852.1|1760014_1760383_+|IS200/IS605-family-transposase
MHVHLVFVTKYRRKIFDQDAIEKLRGYFASVCADFDVGLVEMDGEWDHVHLLINYPPKLAISNLVNSLKGVSSRLLRRDRPDIAQRDYYKGVLWSPSYFAESCGGAPISIIRQYIEQQETPS
>NZ_CP021852.1|WP_004245397.1|1760450_1760705_-|sulfurtransferase-TusA
MNAQFDDATKTLDTLGLRCPEPVMLVRKTIRNMAQGETLLVIADDPATVRDIPGFCRFMEHDLLQQETQATPYRYLIRKKEGQL

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Crispr_ID: NZ_CP021852_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021852_4

2062831-2062926

Orphan

Consensus_repeat	Method
TTAGCACTTATTTTTCTAAGCTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021852_4

>merge|NZ_CP021852|4|2062831-2062926|CRISPRCasFinder
TTAGCACTTATTTTTCTAAGCTATCTATTTCAAGATAATAAACTTATATTCTGTTTTATCTTTTAAAATATATTAGTACTTATTTTTCTAAGCTAT

>NZ_CP021852|4|4|2062831-2062926|CRISPRCasFinder
TTAGCACTTATTTTTCTAAGCTAT	CTATTTCAAGATAATAAACTTATATTCTGTTTTATCTTTTAAAATATA
TTAGTACTTATTTTTCTAAGCTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021852.1\|WP_004249672.1\|2057180_2058479_+\|ATP-dependent-RNA-helicase-RhlB	unknown	unknown	gnl\|CDD\|235314
NZ_CP021852.1\|WP_004246352.1\|2053427_2054519_-\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	unknown	unknown	gnl\|CDD\|237913
NZ_CP021852.1\|WP_004246362.1\|2064685_2065573_+\|HTH-type-transcriptional-activator-IlvY	unknown	unknown	gnl\|CDD\|236961
NZ_CP021852.1\|WP_004246360.1\|2062509_2062779_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	unknown	unknown	gnl\|CDD\|379750
NZ_CP021852.1\|WP_004246354.1\|2054913_2056173_-\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NZ_CP021852.1\|WP_004246349.1\|2051085_2052216_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|223458
NZ_CP021852.1\|WP_004246366.1\|2069996_2070275_-\|acetolactate-synthase-2-small-subunit	unknown	unknown	gnl\|CDD\|236862
NZ_CP021852.1\|WP_004246367.1\|2070271_2071921_-\|acetolactate-synthase-2-catalytic-subunit	unknown	unknown	gnl\|CDD\|181601
NZ_CP021852.1\|WP_004246370.1\|2074176_2074515_-\|DUF413-domain-containing-protein	unknown	unknown	gnl\|CDD\|236825
NZ_CP021852.1\|WP_004249673.1\|2060065_2062087_-\|DNA-helicase-Rep	unknown	unknown	gnl\|CDD\|182838
NZ_CP021852.1\|WP_004249674.1\|2062260_2062509_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021852.1\|WP_004246357.1\|2058482_2059991_+\|guanosine-5'-triphosphate,3'-diphosphate-diphosphatase	unknown	unknown	gnl\|CDD\|236826
NZ_CP021852.1\|WP_004249670.1\|2052345_2053404_-\|ECA-polysaccharide-chain-length-modulation-protein	unknown	unknown	gnl\|CDD\|236943
NZ_CP021852.1\|WP_004246363.1\|2065558_2067133_-\|threonine-ammonia-lyase,-biosynthetic	unknown	unknown	gnl\|CDD\|236417
NZ_CP021852.1\|WP_036893981.1\|2069059_2069986_-\|branched-chain-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|235841
NZ_CP021852.1\|WP_004249676.1\|2067136_2068987_-\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|237104
NZ_CP021852.1\|WP_004246355.1\|2056734_2057061_-\|thioredoxin-TrxA	unknown	unknown	gnl\|CDD\|181812
NZ_CP021852.1\|WP_017827031.1\|2072050_2072152_-\|ilv-operon-leader-peptide	unknown	unknown	gnl\|CDD\|170429
NZ_CP021852.1\|WP_004249675.1\|2063037_2064513_-\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235368
NZ_CP021852.1\|WP_036920151.1\|2072596_2074129_+\|YifB-family-Mg-chelatase-like-AAA-ATPase	unknown	unknown	gnl\|CDD\|182120

Protein	Function_ID	Function_description	E-value
NZ_CP021852.1\|WP_004249672.1\|2057180_2058479_+\|ATP-dependent-RNA-helicase-RhlB	gnl\|CDD\|235314	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional.	0
NZ_CP021852.1\|WP_004246352.1\|2053427_2054519_-\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	gnl\|CDD\|237913	PRK15119, PRK15119, UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase.	0
NZ_CP021852.1\|WP_004246355.1\|2056734_2057061_-\|thioredoxin-TrxA	gnl\|CDD\|181812	PRK09381, trxA, thioredoxin TrxA.	1.85797e-62
NZ_CP021852.1\|WP_004246360.1\|2062509_2062779_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	gnl\|CDD\|379750	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ. YafQ is a family of bacterial toxin ribonucleases of type II toxin-antitoxin systems. The E.coli gene is expressed from the dinB operon. The cognate antitoxin for the E. coli protein is DinJ, in family RelB_antitoxin, pfam02604.	1.15858e-41
NZ_CP021852.1\|WP_004246354.1\|2054913_2056173_-\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_CP021852.1\|WP_004246349.1\|2051085_2052216_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP021852.1\|WP_004246366.1\|2069996_2070275_-\|acetolactate-synthase-2-small-subunit	gnl\|CDD\|236862	PRK11152, ilvM, acetolactate synthase 2 small subunit.	3.08752e-35
NZ_CP021852.1\|WP_004246367.1\|2070271_2071921_-\|acetolactate-synthase-2-catalytic-subunit	gnl\|CDD\|181601	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed.	0
NZ_CP021852.1\|WP_004246370.1\|2074176_2074515_-\|DUF413-domain-containing-protein	gnl\|CDD\|236825	PRK11027, PRK11027, hypothetical protein; Provisional.	1.02914e-69
NZ_CP021852.1\|WP_004249673.1\|2060065_2062087_-\|DNA-helicase-Rep	gnl\|CDD\|182838	PRK10919, PRK10919, ATP-dependent DNA helicase Rep; Provisional.	0
NZ_CP021852.1\|WP_036920151.1\|2072596_2074129_+\|YifB-family-Mg-chelatase-like-AAA-ATPase	gnl\|CDD\|182120	PRK09862, PRK09862, ATP-dependent protease.	0
NZ_CP021852.1\|WP_004246357.1\|2058482_2059991_+\|guanosine-5'-triphosphate,3'-diphosphate-diphosphatase	gnl\|CDD\|236826	PRK11031, PRK11031, guanosine-5'-triphosphate,3'-diphosphate diphosphatase.	0
NZ_CP021852.1\|WP_004249670.1\|2052345_2053404_-\|ECA-polysaccharide-chain-length-modulation-protein	gnl\|CDD\|236943	PRK11638, PRK11638, ECA polysaccharide chain length modulation protein.	0
NZ_CP021852.1\|WP_004246363.1\|2065558_2067133_-\|threonine-ammonia-lyase,-biosynthetic	gnl\|CDD\|236417	PRK09224, PRK09224, threonine ammonia-lyase IlvA.	0
NZ_CP021852.1\|WP_036893981.1\|2069059_2069986_-\|branched-chain-amino-acid-transaminase	gnl\|CDD\|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	0
NZ_CP021852.1\|WP_004249676.1\|2067136_2068987_-\|dihydroxy-acid-dehydratase	gnl\|CDD\|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP021852.1\|WP_004246362.1\|2064685_2065573_+\|HTH-type-transcriptional-activator-IlvY	gnl\|CDD\|236961	PRK11716, PRK11716, HTH-type transcriptional activator IlvY.	0
NZ_CP021852.1\|WP_017827031.1\|2072050_2072152_-\|ilv-operon-leader-peptide	gnl\|CDD\|170429	PRK10424, PRK10424, ilv operon leader peptide.	0.00197669
NZ_CP021852.1\|WP_004249675.1\|2063037_2064513_-\|ketol-acid-reductoisomerase	gnl\|CDD\|235368	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated.	0

>NZ_CP021852.1|WP_004246360.1|2062509_2062779_+|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family
MRKVSYSGQFKKDLKLAEKRGKDINKLKEIILLLVQGKRLPAQLKDHPLTGNWKPRRDLHIEPDWLLIYKIDNDTVHFDRTGSHSDLFK
>NZ_CP021852.1|WP_004249674.1|2062260_2062509_+|hypothetical-protein
MSIKSELIATKVDIELKEAFVAIARNKHRPASQILRDLIRVYVESNQTQPNEKTLNTFAKTDKDDDVFYAEDAHDLFKKLDI
>NZ_CP021852.1|WP_004249673.1|2060065_2062087_-|DNA-helicase-Rep
MRLNPGQQKAVEYVSGPCLVLAGAGSGKTRVITNKIAYLIRQCRYSAKQIAAVTFTNKAAREMKERVAQTLGKQEAKGLMISTFHTLGLEIIKREYKALGIKSNFSLFDDQDQSALLKELTVDLLEEDKDLLSQLKSQISNWKNDMLTPEQVIGRAQSQQDHTFAECFRRYEQHLLSCNVLDFDDLISKPTLLLRTNEEVRARWQQRIRYLLVDEYQDTNTSQYELVKWLVGERARFTVVGDDDQSIYSWRGARPQNLVLLQKDFPQLNVIKLEQNYRSSGRILKSANILIENNPHVFEKRLFSELGYGDELRVLTANNEEHEAERVAGELIAHHFINKTNYKDYAILYRGNHQSRIFEKYLMQNRIPYRISGETSFFSREEIKDILAYLRVITNPDDDAAFLRIVNKPRREIGPMTIQKLGEWAKVRDKSLFNACFDLGLSQTLTGRGLSALQAFSQWMARIVQQSEREPLLAVRDLLHEMDYESWLYETSSSAKAAEMRMKNINQLFSWMSEMLEGDELHEPMTLSQVVNRFTLRDMMERGETDEELDQVQLMTLHASKGLEFPHVFLVGMEEGILPHQSSIDEDNVEEERRLAYVGITRAQKTLTFTLCKERRQYGELIRPEPSRFLYELPQDDLHWDTNKKKVLSAQEKQEKGQKGVAGLKAMLARHKP
>NZ_CP021852.1|WP_004246357.1|2058482_2059991_+|guanosine-5'-triphosphate,3'-diphosphate-diphosphatase
MLKSSSLYAAIDLGSNSFHMLVVREIAGSIQVLSRVKRKVRLAAGLNKENELSEQAMERGWQCLRLFSEYLRDIPAEQIRVVATATLRIAKNADIFVAKASEILGNTVHVISGEEEARLIYRGVAHTTGGAEQRLVVDIGGGSTELVTGTGAKTTQLMSLSMGCVTWLERYFSDRSLTEENFAQAQQAAKAILAPVAEKLIQQGWQVCVGASGTVQALQEIMIAQGMDELITLPKLERLKQKAIECGKLEELEIEGLTFERALVFPSGLAILIAIFETLHIENMILAGGALREGLVYGMLHLPIEQDIRQRTLRNIQRRFQIDIEQAHRVQQLAEHFFIQVSKSWQLDNRCRELLSSACALHEIGLSVDFRQAPSHASYLVSHLDLPGYTPAQRRLIASFLRNQKGIIDLAPLNQQNALPINQAYRLVRLLRLAIIFASRRRDDTLPALRLRTEDEKLIITLPHQWIAEHPLRAENLHEEIQLQSYVHWPLMLEEQNNSRIG
>NZ_CP021852.1|WP_004249672.1|2057180_2058479_+|ATP-dependent-RNA-helicase-RhlB
MSKTYLTEKKFSDFALHPKVIEALEKKGFSNCTQIQALTLPITVKGHDIAGQAQTGTGKTLAFLTSTFHYLLTHPAKEGHEKNQPRALIMAPTRELAVQIYTDAQPLAQSTGIKMGLAYGGDGYDEQLKVLNNGVDIVIGTTGRLIDYVKQGHINLNAIQVVVLDEADRMYDLGFIKDIRWLFRRMPNAAERMNMLFSATLSYRVRELAFEQMNNPEYVEVEPEQKTGFSIKEELFYPSNEEKMRLLQTLIEEEWPERCIIFANTKHRCDDIWAHLAADGHRVGLLTGDVPQKKRLRILEDFTQGNIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGKSGNSISLACEEYALNLPAIETYIQHAIPVSKYNSDALLTDLPEPKRRHRPRQGQPRRNNSAPRRGNNTQRNNRNKRPSHS
>NZ_CP021852.1|WP_004246355.1|2056734_2057061_-|thioredoxin-TrxA
MSDKILHLSDNTFDVDVLQATGPVLVDFWAEWCGPCKMIAPILDEVATEYAGKLTVAKLNIDENPATAPKYGIRGIPTLILFKNGAVAATKVGALSKTQLKEFLDENI
>NZ_CP021852.1|WP_004246354.1|2054913_2056173_-|transcription-termination-factor-Rho
MNLTELKNTPVSELIALGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKEGERYFALLKVNEVNFDKPENARSKILFENLTPLHANNRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPPKAGKTMLLQNIAANIAHNYPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTSQDELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNEEFFDFMKRS
>NZ_CP021852.1|WP_004246352.1|2053427_2054519_-|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase
MDILKMSTNVFYVFLFSFAFLFVARKVAKKIGLVDKPNYRKRHHGLIPLVGGISVYFGIVFAFYVSDIYIPHKELYLICAGILVFIGALDDRYDISVKIRATIQALVGIAMMVFGGLKLESLGHAFGPWDMHLGPFGYIVTLFAVWAAINAFNMVDGIDGLLGGLSCVSFGALGILLYQSGSSALAFWCFSFIAAILPYIMLNLGVCGKKFKVFMGDAGSTLIGFTIIWLLISSTQVDPHPINAVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPDRQHIHHLIMRAGFTPRQAFVLITLAAAVLAAIGIIGENLSFVPEWVMLALFLLAFVMYGYCIKRAWRVARFIKRYKRRLRKATQLKH
>NZ_CP021852.1|WP_004249670.1|2052345_2053404_-|ECA-polysaccharide-chain-length-modulation-protein
MNSENNVSRQGFSPDNELDIRGLCCALWSGKRWIIGFALLFALIALGASYLMQPKWSAIAMTERPTVNNLGSYYSQSQFLRNLDTQINPSVTVSQLSIPDEAYQEFVTQISAFDTRREFWLQTDYYKQRKENDAQADAALLDELINNIQFTPADEKKLVNDQLKLIAETANDSSQLLNEYIAFANKRAAEHLNEEVIAAWATRTQSMKALVKRQEMAAQAAYQRQINLLKQSIKVAEKQGISQKQTSIAIDELPDSKLFLLGVPLLQSQLETLMATGPDFDSDYDQNTAMLSTLAVGAKLQDNFQTYRFLRTPEDPVKRDSPRRAFMMVLWGAIGVLVGAGVALVRRSSLKK
>NZ_CP021852.1|WP_004246349.1|2051085_2052216_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MKVLTVFGTRPEAIKMAPLVHALANDDSFEAKVCVTAQHREMLDQVLNLFEIKPDYDLNIMKPGQDLTDITCRILEGLKPVLASFQPDVVLVHGDTTTTMAASLAAFYQQIPVGHVEAGLRTGNLYSPWPEEANRTIAGHLAMYHFAPTETAKLNLVREAVADKNIFVTGNTVIDALFWVSERVMGNQTLLDELAVQYPFIQPERKMILVTGHRRESFGGGFERICQALAEIALAHPDVEVVYPVHLNPNVSEPVKRILHGINNIKLIQPQDYLPFVYLMNHAYLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVEAGSVRLVGTDTKRIVSEVTSLLTDENAYHQMSKATNPYGDGHACQRILEALKNNQVTL
>NZ_CP021852.1|WP_004249675.1|2063037_2064513_-|ketol-acid-reductoisomerase
MANYFNTLNLRQQLSQLGKCRFMSRDEFADEANYLKGKKVVIVGCGAQGLNQGLNMRDSGLDIAYALRQEAIDEKRASWRRATENGFEVGTYEALIPQADLVVNLTPDKQHSAVVQAVQPLMKSGAALGYSHGFNIVEVGEKIRDDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDAKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCYDKMVAEGVEPGYAGKLIQFGWETITEALKQGGITLMMDRLSNPAKMRAYALSEQLKEIMAPLFAKHMDDIISGKFSETMMADWANDDKNLLTWREETGASAFENYPEYEGKISEQEYFDHGVLMVAMVKAGVELAFDTMIEAGIIAESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYGNYLFSFAAVPMLKEFMTRLQSGDLAKHVPDSGTDNAQLRDINEAIRQHPIEIVGKKLRGYMTDMKKIAVAN
>NZ_CP021852.1|WP_004246362.1|2064685_2065573_+|HTH-type-transcriptional-activator-IlvY
MDIRDLKLFLHLAESCHFTKTAQAMHVSPSTLSRQIQRLEEQLGHPLFLRDNRQVTLTDAGEQLKRYAQHTLLQYKQLKHTLNQNSPSLSGELRLFCSVTAAYSHLPPILDRFRAENPLVEIKLTTGDAADAVDKVISDEADLGIAGKPEKLPENICFEKIGEIPLVLIAPALPGNVRHLATQEKPDWLNIPFIIPEHGPSRQRIALWFKRHRIQNPLIYATVSGHEAIVSMVALGCGIALIPQVVVDNCPEPVRNRISLLDNISLVEPFELGVCGLHKRLQEPVISAFWRLLHH
>NZ_CP021852.1|WP_004246363.1|2065558_2067133_-|threonine-ammonia-lyase,-biosynthetic
MAAFRPLTSAPSSAEYLKAALSAPVYEAAVVTPLQEMAKISQRLENTILVKREDRQPVHSFKLRGAYNMIAGLTPEQKAKGVVTASAGNHAQGVALSANRMGVKALIVMPIATADIKVDAVRQFGGEALLYGANFDEAKAKAIALAKEMGYTFVPPFDHPAVIAGQATLAMELLQQDVHLDRIFVPVGGGGLIAGVAVLIKQLMPEIKIIGVEAEDAACLKAALEAGHPVELPRVGLFAEGVAVKRIGDETFRLCQKYVDDVITVDSDAICAAVKDLFEDVRAIAEPSGALALAGLKKYVEEHQIKGERLAHVLSGANVNFHGLRYVSERCELGEKREALFAVTIPEQKGSFLRFCQILGQRVVTEFNYRYSDADPENARIFVGVRLSQGLQERKEIVQQLTEAGYQVSDLSDDEMAKLHVRYMVGGRPNQPLKERLFSFEFPEAPGALMKFLKTLGTYWNITLFHYRSHGTDYGRVLVAFELPETEGRFERHLDALGYEYHDETGNPSFQLFLSPQTASLVVE
>NZ_CP021852.1|WP_004249676.1|2067136_2068987_-|dihydroxy-acid-dehydratase
MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQLIKLDLVDAMIQGANPNVSDADSEQIERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKTLFINAGKRIVELTKRYYEQDDLSALPRNIAKKEAFENAMILDIAMGGSTNTVLHLLAAAQEGDVDFKMEDIDRLSRQVPHLCKVAPSTQKYHMEDVHRAGGVMGILGELDRAGLLNRNVNNILGLSLPETLAQYDVMLSQDEQVKSMYQAGPAGIRTTKAFSQDCRWPTLDTDREQGCIRSKAHAYSQDGGLAVLSGNLAQDGCIVKTAGVDEDNLVFSGPAKVYESQDDAVEAILGGKVVAGDVVIIRYEGPKGGPGMQEMLYPTSYLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAANGGIIGLVEEGDIVDINIPNREINLRVDEKTLAARREAQLARGDKAWTPKDRQRQVSFALRAYASLATSADKGAVRDKSKLGG
>NZ_CP021852.1|WP_036893981.1|2069059_2069986_-|branched-chain-amino-acid-transaminase
MTKQADYIWFNGEMVPWAEAKVHVMSHALHYGTSVFEGVRCYDSHKGPVVFRHREHMQRLHDSAKIYRMPVAQSVDELMGACRETLRKNQLVSAYIRPLVFIGDVGMGVNPPEGYKTDIIIAAFPWGAYLGEEALDKGIDAMVSSWHRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVHGYLSEGAGENLFEVKDGVIFTPPFTSSALPGITRDAIIKLAKDLGYEIREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGIGRCGPVTKAIQKAFFGLFTGETEDKYGWLDPVNP
>NZ_CP021852.1|WP_004246366.1|2069996_2070275_-|acetolactate-synthase-2-small-subunit
MNQHNITIEARFCPEILERILRVIRHRGFHICSMNMNITESNYINLALTVSSQRPVDLLCSQLTKLADVAGIQVLHQQQKEKLQFISALSAM
>NZ_CP021852.1|WP_004246367.1|2070271_2071921_-|acetolactate-synthase-2-catalytic-subunit
MNGAQWLVQALRKQRVETVFGYPGGAIMPVYDALYDGGVEHVLCRHEQGAAIAAIGFARSTGTTGVCIATSGPGATNVITGLADALLDSVPVVAITGQVASNLIGTDAFQEVDVLGLSLACTKHSFLVSDVNELPRVVSEAFSIAKQGRPGPVLIDITKDVQLADASHLADYPLPQEQEFPYPEHEIAQALQMLAQAKKPILYVGGGVAMSQGVEALRSFVKQTQIPVVSTLKGLGCANAFDANYLGMLGMHGTKAANYAVQRSDLLIAVGARFDDRVTGRLNTFAPNAKVIHIDIDYAELNKLKQAHIALLGDAKVLLPKLSQPLAIEAWQEEVQQLIAEYAWRYDHPGEAIYAPLLLKQLSDAKPENSIVTTDVGQHQMWSAQHMTFDAPENFITSSGLGTMGFGIPAAIGAQIARPDACVICVSGDGSFMMNVQELGTIKRKQLPIKLVLLDNQRLGMVRQWQELFFEQRYSETILTDNPDFVALAKAFDIPGQRITEKAQVAEAIKCLLTSDGPYLLQVSIDDAENVWPLVPPGASNDEMMEKSK
>NZ_CP021852.1|WP_017827031.1|2072050_2072152_-|ilv-operon-leader-peptide
MNTIVLVISLIIVSVVVIINPLCGAALGRRKAN
>NZ_CP021852.1|WP_036920151.1|2072596_2074129_+|YifB-family-Mg-chelatase-like-AAA-ATPase
MALAVIYTRASLGISAPLITIEAHISQGLPGLTLVGLPETVVKEAKDRVRSALINSGYSYPAKRITINLSPADLPKEGARYDLPIALAILIASEQLISDKLNSYEFIGELALSGKLQKVNAVIPSILSANKDNRISIISIEHQSEVSLLPNKSALLASHLLDICHHLENNTPLIEAKNNINHKTIENQNNKDISDIIGQNNAKRAAEITAAGNHNILFLGPPGTGKTMLAQRINTLLPPLTAKEALDVLIISSLSNTIHHDGKWPLRPFRAPHHTASAVALTGGGSIPKPGEITLAHHGILFLDELPEFDRRVLDALREPLDARKITISRAKAKISYPANVLLVGALNPSPTGHYQGTHNRTPVKQVLRYLSKVSGPFLDRFDLSVEMPLLPQGALLQSTHTNESSSIIRARVLQARERQFQRSGKLNTYLSSKEIEHFCQLHTEDALFLEETLNKLGLSIRAWHKILRVSRTIADLENEQKIQRNHLIEALSFRAMDRLMIYLQKQLEG
>NZ_CP021852.1|WP_004246370.1|2074176_2074515_-|DUF413-domain-containing-protein
MAESFITTNRFFDNKHYPRGFSRHGDFTIKEAQILERHGQAFNELDLGKREPATEAEKLFVAMCRGEREAATVEEKIWKKYTSRISRPKRFHTLSGGKPQLDPSDDYTDSDD

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Crispr_ID: NZ_CP021852_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021852_5

3543490-3543632

Orphan

Consensus_repeat	Method
CCACCTGTAAAATTGATATCACC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP021852_5

>merge|NZ_CP021852|5|3543490-3543632|CRISPRCasFinder
CCACCAGTAAAGTTGGTATTACCATAATTAGAGTTATGTTTTATTACATTTGCTATGCCGCCACCTGTAAAATTGATATCACCTTGTGTAACATCAGATTTAATGACATTACCAGCGCCACCACCTGTGAAATTGATATCACC

>NZ_CP021852|5|5|3543490-3543632|CRISPRCasFinder
CCACCAGTAAAGTTGGTATTACC	ATAATTAGAGTTATGTTTTATTACATTTGCTATGCCG
CCACCTGTAAAATTGATATCACC	TTGTGTAACATCAGATTTAATGACATTACCAGCGCCA
CCACCTGTGAAATTGATATCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021852.1\|WP_004244077.1\|3529612_3531040_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP021852.1\|WP_004250357.1\|3520004_3521204_-\|transporter	unknown	unknown	gnl\|CDD\|182559
NZ_CP021852.1\|WP_004244060.1\|3552738_3552960_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021852.1\|WP_036973441.1\|3552242_3552671_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021852.1\|WP_004244059.1\|3553162_3554062_-\|LysR-family-transcriptional-regulator-ArgP	unknown	unknown	gnl\|CDD\|235144
NZ_CP021852.1\|WP_004244066.1\|3549134_3549506_+\|YacL-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP021852.1\|WP_004244080.1\|3524860_3527527_+\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP021852.1\|WP_004244067.1\|3546366_3548964_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP021852.1\|WP_004244087.1\|3519112_3519727_-\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP021852.1\|WP_004244063.1\|3550626_3551250_+\|arginine-exporter-ArgO	unknown	unknown	gnl\|CDD\|236463
NZ_CP021852.1\|WP_004250359.1\|3521200_3522304_-\|transporter	unknown	unknown	gnl\|CDD\|236694
NZ_CP021852.1\|WP_004244058.1\|3554222_3554879_+\|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl\|CDD\|234816
NZ_CP021852.1\|WP_004244082.1\|3523057_3523600_+\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP021852.1\|WP_004248538.1\|3551340_3552075_+\|oxidative-stress-defense-protein	unknown	unknown	gnl\|CDD\|236840
NZ_CP021852.1\|WP_004250364.1\|3527539_3529411_+\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP021852.1\|WP_004244084.1\|3522403_3522847_-\|prepilin-peptidase-dependent-pilin	unknown	unknown	gnl\|CDD\|236718
NZ_CP021852.1\|WP_004248535.1\|3555234_3556485_+\|phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|236985
NZ_CP021852.1\|WP_004248539.1\|3549597_3550458_+\|small-conductance-mechanosensitive-channel-MscS	unknown	unknown	gnl\|CDD\|182386
NZ_CP021852.1\|WP_004250354.1\|3518357_3519110_-\|cell-division-protein-ZapD	unknown	unknown	gnl\|CDD\|235389
NZ_CP021852.1\|WP_012368227.1\|3523926_3524697_+\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879

Protein	Function_ID	Function_description	E-value
NZ_CP021852.1\|WP_004244077.1\|3529612_3531040_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP021852.1\|WP_004250357.1\|3520004_3521204_-\|transporter	gnl\|CDD\|182559	PRK10573, PRK10573, protein transport protein HofC.	2.0157e-108
NZ_CP021852.1\|WP_004244059.1\|3553162_3554062_-\|LysR-family-transcriptional-regulator-ArgP	gnl\|CDD\|235144	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator.	1.29397e-161
NZ_CP021852.1\|WP_004244066.1\|3549134_3549506_+\|YacL-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	9.00597e-61
NZ_CP021852.1\|WP_004244080.1\|3524860_3527527_+\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP021852.1\|WP_004244067.1\|3546366_3548964_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP021852.1\|WP_004244087.1\|3519112_3519727_-\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.55125e-90
NZ_CP021852.1\|WP_004244063.1\|3550626_3551250_+\|arginine-exporter-ArgO	gnl\|CDD\|236463	PRK09304, PRK09304, arginine exporter ArgO.	1.63858e-119
NZ_CP021852.1\|WP_004250359.1\|3521200_3522304_-\|transporter	gnl\|CDD\|236694	PRK10436, PRK10436, hypothetical protein; Provisional.	5.50551e-180
NZ_CP021852.1\|WP_004244058.1\|3554222_3554879_+\|ribose-5-phosphate-isomerase-RpiA	gnl\|CDD\|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	5.44811e-141
NZ_CP021852.1\|WP_004244082.1\|3523057_3523600_+\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	1.4971e-130
NZ_CP021852.1\|WP_004248538.1\|3551340_3552075_+\|oxidative-stress-defense-protein	gnl\|CDD\|236840	PRK11087, PRK11087, oxidative stress defense protein; Provisional.	6.92322e-114
NZ_CP021852.1\|WP_004250364.1\|3527539_3529411_+\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP021852.1\|WP_004244084.1\|3522403_3522847_-\|prepilin-peptidase-dependent-pilin	gnl\|CDD\|236718	PRK10574, PRK10574, putative major pilin subunit; Provisional.	5.15077e-55
NZ_CP021852.1\|WP_004248535.1\|3555234_3556485_+\|phosphoglycerate-dehydrogenase	gnl\|CDD\|236985	PRK11790, PRK11790, phosphoglycerate dehydrogenase.	0
NZ_CP021852.1\|WP_004248539.1\|3549597_3550458_+\|small-conductance-mechanosensitive-channel-MscS	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	6.51737e-120
NZ_CP021852.1\|WP_004250354.1\|3518357_3519110_-\|cell-division-protein-ZapD	gnl\|CDD\|235389	PRK05287, PRK05287, cell division protein ZapD.	1.19728e-117
NZ_CP021852.1\|WP_012368227.1\|3523926_3524697_+\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	1.72207e-168

>NZ_CP021852.1|WP_004244077.1|3529612_3531040_+|dihydrolipoyl-dehydrogenase
MSTEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLVERHSTLGGVCLNVGCIPSKALLHVAKVIEEAKALSEHGVVFDAPKTDIDKIRIWKDKVISQLTGGLAGMAKGRKVNVVNGEARFTGSHTLSVEGSEGTTTITFENAIVAAGSRPIELPFIPHEDPRVWDSTDALQLKTVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGIEVDDRGFIHVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVGMTEKEAKEKGVSYEVATFPWAASGRAIASDCADGMTKLIFDKETNRVIGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLYESIGMAAEVFEGSITDLPNPKAKKKK
>NZ_CP021852.1|WP_004250364.1|3527539_3529411_+|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MSIEIKVPDIGADEVEVTEVMVKVGDRIEEEQSLITVEGDKASMEVPSPQAGIVKEIKIAVGDKVETGSLIMIFDTEEGAQAPAQEAAPAPSAAAPAASELKEVHVPDIGGDEVEVTEVMVNVGDTIAEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVSTGSLIMVFEVAGSAPAPSASAPAPAASAPAASAIKDVNVPDIGGDEVEVTEVMVKVGDTIAEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVKTGSLIMTFEVAGAAPAAQAPAAPAASTSAAPAPSAPAKAPASAPAAKEEFVENEAYVHATPVIRRLAREFGVNLAKVKGTGRKGRILREDVQSYVKELIKRAESAPANAGGGLPGMLPWPKVDFSKFGEIEEVELSRIQKISGANLSRNWVMIPHVNLFDEADITEVEEFRKQQNKEAEKKKLDVKITPLVFVMKAAAKALADMPRFNSSISEDGQKLILKKYINIGIAVDTPNGLVVPVFKDVNKKGILELSYELAEVSKKARAGKLTASDMQGGCFTISSLGGIGTTGFAPIVNAPEVAIMGLSRSSMKPVWNGKEFVPRLMLPMSLSFDHRVIDGADGARFITLINQYMSDLRRLVM
>NZ_CP021852.1|WP_004244080.1|3524860_3527527_+|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSDMLKNDVDPIETRDWLQAIDSVIREEGVERAQFLIDQVLKQARNGGLDIALGGSVHSDYINTIPVEDEPAYPGNLELERRIRSAIRWNAVMMVLRASKKDLELGGHMASYQSSATLYEVCFNHFFRAHNDNDGGDLVYFQGHISPGIYARAFLEGRLTEEQLNNFRQEIGGKGLSSYPHPKLMPEFWQFPTVSMGLGPLSAIYQAKFLKYLDHRGLKDTTKQRVYAFLGDGEMDEPESKGAITIAVREKLDNLCFVVNCNLQRLDGPVTGNGKIVNELEGIFAGAGWNVIKVMWGDRWDALLRKDTSGKLIQLMNETLDGDYQTFKSRDGAYVREHFFNRYPETAALVKDMTDDEIWALNRGGHDPKKVFAAFQKAKETKDKPTVILAQTIKGYGMGETAEGKNIAHQVKKMNMDGVKHFRDRFNIPVSDEKVAELPYITFDKDSEEYKYLHARRQELEGYLPARRTRFDEKLEIPTLEDFSQLLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDVKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAFAYEVAVIMQDGLERMYGDKQENVYYYITTLNENYHMPAMPAGAEEGIRKGIYKLESLEGAKGKVQLLGSGSILRHVREAAQILSTEYGIGSDVYSVTSFTELARDGQDCERWNMLHPSEEPRVPYIAQIMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDTSYVIVAALGELAKRGEIDVKVVEEAIKKYNINPEKVNPRLA
>NZ_CP021852.1|WP_012368227.1|3523926_3524697_+|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MAYTKIRQPKLSDVIEQQLEHLILEGTLRPGEKLLPERELAKQFDVSRPSLREAIQKLEAKGFLLRRQGGGTFVQDNLWQSFSDPLAQLLSGHPESQFDLLETRHALEGIAAYYAALRGTDDDLERIKASHARIIDAHDKGDIAAESDAVLQYQLIVTEAAHNVVLLHLLRCMVPMLEQNIRQNFEFLYTRKEMLTAVSEHRTQIYQAIINREPEAAREASHRHLAFIEDVLLDMSREHTRRERSLRRLQQHPDLF
>NZ_CP021852.1|WP_004244082.1|3523057_3523600_+|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MEIKQGWLTGVKLVPSPNYDNRPEGEIPSLLIIHNISLPPGQFGGPYIDQLFTNTLAVDDHPFFNEIAHLRVSAHCLIRRDGEIVQYVPFTARAWHAGVSFYKGREKCNDFSIGIELEGTDECDFTPLQYQQLSTLTQQLIEHYPGIKENITGHSDVAPGRKTDPGPHFNWSYYRALLAK
>NZ_CP021852.1|WP_004244084.1|3522403_3522847_-|prepilin-peptidase-dependent-pilin
MNTLNYHSTENGFTLMELMIVIAIISILSSVAIPAYHGYIQKAALTDVLQTLSPYRSAVELCHYEHQYNQCHADASFMPQQFRSRYLTDIHVANGVISAKGKAQLEGLTIVMTPATNSKETLPHWQINCTSTNTALQTLCHKVFKSH
>NZ_CP021852.1|WP_004250359.1|3521200_3522304_-|transporter
MNNTIHTATEFIEQLLRHSLAQRVSDLHLEPQQNSLRIRARIDNHLVLFSPPDNQLANEILTRLKILANINIAEKRLPQDGQFNWSYQKNNYSIRVATLPTLYGEKIVLRLMNNLQQPQLAQLGFQTIHLTLLKKYLTQPQGMILVTGPTGSGKTLTLYSCLQYLNKDNRNINSIEDPIELPLHGINQTQITEKAGITFATILRALLRQDPDVIMIGEIRDQQTAEIAIKAAQTGHLVLSTLHTNSTQATLARLANLGIAKDLIDSCVKLIISQRLVRCLCSNCKYPSPEQKNFIINNQQIILPNWQATGCQFCYSGYKGRTAIYDCFELAKQSLPSPYALFNSGIELIKKGITSLDEVYQVVGDIE
>NZ_CP021852.1|WP_004250357.1|3520004_3521204_-|transporter
MKLHFIYRYNALTYQGKWLSGNVVAQSKHEVIDQLIQQQKLPVKIRLYRVIIFQNSDKQYRIQLLEQLALLLHSGLALLPALTLLKEECRYLHWQCVLNDIIFHLNQGGALSKQLSRYPLYFPANLTHFIYIGEESGKLDEVLLLQTTQLKNQRDLIKKIIKAFQYPLFLLLTLIVITISMLIYVLPEYQSLYSAFNTELPTLTLTLIRCSQWFSQYSLIILLFILIISYSYYTIKHHSAKFRDIEQRCWLNLPYLGVLLRYHQLHIIFQIMTITQQAGLPLLQGLKIITEQLTHSLYQRALTDMIAHITQGKSLSSFMRHNPLFPPICYQFISSAENSGQLQFFCQQLTHWFYHQLEERLDSVKTWLEPILMTLIALITGTLIIAMYLPVLQLGDTIH
>NZ_CP021852.1|WP_004244087.1|3519112_3519727_-|dephospho-CoA-kinase
MTYTVALTGGIGSGKTTIANGFASLGVPLVDADVIARLVVEPDSPGLKALQQHFGDTILLPDGKLNRAQLRHIIFQNQQEKAWVNQLLHPLIQQETQKQIQQIRAPYFIWVVPLLVENKLTHLADRILVVDVTEEEQITRTMQRDGVSRDHVLKILQAQAKREQRLAVADDIIENHDNSLNQDEQIKQLHQHYLELAQKSNTGQ
>NZ_CP021852.1|WP_004250354.1|3518357_3519110_-|cell-division-protein-ZapD
MSEETSTIIFEHPLNEKMRSWLRIENSLIQLNSFQSINSLSSALSFFRAVSEFIEVLDRGEIRAELLKELEKRQKKLQQWLSFPNVDKEIVSHIINELSESACALSKAPRIGQHLKQDKIISLVKQRLSIPGGCCSFDVPTLHLWLNLPQTVRTEKLTCWQEGLYPLQNALNALLTLIRQSDTFKPVLSHSGFYQDSTEEGELLRIKLLASQQIYPQVSGHKNRYAIRFLPLDSEHGTIPSELPFEISCC
>NZ_CP021852.1|WP_004244067.1|3546366_3548964_+|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAEGVVPKPLDATQTAALVELLKSPPKGEEEFLLDLIVNRVPPGVDEAAYVKAGFLTALAKGETTSPLITPEKAVELLGTMQGGYNIHALIEALDNDKLAPIAAKALSHTLLMFDSFYDVEEKAKAGNVYAKQIMQSWADGEWFTERPELAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGSVGPIKQIEALNKKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPYVPNKRGGGVVLGGKIAPIFFNTMEDAGALPIEVDVSKLNMGDVIDIYPYKGEIRNHETNELLETFALKTEVLIDEVRAGGRIPLIIGRGLTSKARSALGLPPSTLFRHAKAVEQSDRGFSLAQKMVGRACGRDGIRPGEYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRDLVHAIPLYAIKEGLLTVEKKGKKNIFSGRILEIEGLPELKVEQAFELADASAERSAAGCTIKLDKAPIIEYLQSNIVLLKWMIAEGYGDRRTLERRITAMENWLADPQLLEADADAEYAAVIEIDLNEIKEPILCAPNDPDDARLLSEVANSKIDEVFIGSCMTNIGHFRAAGKLLDQHKGQLPTRLWVAPPTKMDAAQLTEEGYYSVFGKSGARIEVPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVYLASAELAAVASLLGRLPEPQEYLDFINKVDETAEDTYRYLNFDQLEQYTDKATQVIFQTTV
>NZ_CP021852.1|WP_004244066.1|3549134_3549506_+|YacL-family-protein
MDYEFQRDLTGGILARFSMDHEAIGYWLNDEIQGDISLIDQILTEMDEVKGSEKQWQLIGKEYSLSIDDEEIMVRANTLHFETDDLEEGMSYYDNESIAFCGLDDFATMLQKYRLFILENRRS
>NZ_CP021852.1|WP_004248539.1|3549597_3550458_+|small-conductance-mechanosensitive-channel-MscS
MNELPASLDEATGWFVANQELFIQYAVNIVAAFLILFIGLFVAKMVSKGVARILTLRHIDATVVTFLSVLVRYTVIAFTLIAVLGRLGVQTASVIAVLGAAGLAVGLALQGSLSNFAAGVLIVIFRPIRAGEYVMIGAVEGTVRDVQIFSTTLRSADDRIIVIPNSKIISSEVINLSREPNRRTQIIVGVAYDADIDKVKKVLGDVVAQDKRIQHNQGVTIRLHEMAPSSLNFVVRVWTTNDDAWPVYWDLMENFKRALDANNIGIPFPQMDVYMHQAQNTVMKAE
>NZ_CP021852.1|WP_004244063.1|3550626_3551250_+|arginine-exporter-ArgO
MLTTFFQGFLLSAAMILPIGAQNAFVLQQGSKKQYHLMSAFLCALSDVILISGGVFGGSALLSQSEYLLLLITWGGVAFLLWYGWNAFKTAFTKEIELSQHKNQVKSRWRVIVTLVAVTWLNPHVYLDTFVVLGSIGGQLSAELRPWFTFGAVFASISWFFALSLLAAWFSPILSQVTAQRIINLFVGCVMWFIALQLAAQGWKNLF
>NZ_CP021852.1|WP_004248538.1|3551340_3552075_+|oxidative-stress-defense-protein
MKVKAMVLASMLALGAPSIALAGAVPEGPHITTSGNATIKATPDMATLNIQVSEKAKDAAQAKKQVDERVAKYFAFLKENGVTKEDIDAANIRTQPNYEYDKKAERSVINGYTATRTVDVKIKKLDQLNTLLDGALAAGLNEINNVEFGVNDPEQYKAKAREVAIKNAIQQASSVAKGFGADLGAVYSVSYRAPEATPYPIARMKMDAMALSAPSPEAVKETYQQQSIEFKDYVDVVFELKTAK
>NZ_CP021852.1|WP_036973441.1|3552242_3552671_-|hypothetical-protein
MADIATLIAKWRNGLEVEIYTENYEFRYGRIKSSRFNASGEESVYYATYFHTRAKPKDNDPFLIITFDPVVGQDDFMFIETIIDHRTYFGSPGASKTKSHIERRSSDLKRRIENGKKISSEPSSSVQNVNKNNNDSPDQENK
>NZ_CP021852.1|WP_004244060.1|3552738_3552960_-|hypothetical-protein
MSTFIRRSRNVALAIDAGRKSGSANIEGNTPADIQASLLKSLGEFTASIPTTKQQPYVKGSHGANHKKTYFGR
>NZ_CP021852.1|WP_004244059.1|3553162_3554062_-|LysR-family-transcriptional-regulator-ArgP
MKRPDYRALQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPQPTEQGQKLLALLHQVEMLEEQWLGDENSGSTPLLLSLAVNADSLATWLLPALHPVLTQLPIRLNIQVEDETRTQERLRRGEVVGAISIQPQALPSCLVDQLGALDYLFVASPDFAQRYFANGVTKSSLLKAPAVAFDHLDDMHQAFLQQNFGLSPGSVPCHIVNSSEAFVQLAKQGSTCCMIPHLQIADELKSGELIDLTPGLCQRRMLYWHRFAPESRTMRKVTDALLDYGRKVLKQDEE
>NZ_CP021852.1|WP_004244058.1|3554222_3554879_+|ribose-5-phosphate-isomerase-RpiA
MTQDELKKAVGWAALEYVKPGTIVGVGTGSTASHFIDALATMKGQIEGAVSSSEASTAKLKSYGIPVFDCNEVDSLDIYVDGADEINHQMQMIKGGGAALTREKIIAAVAKTFVCIVDESKQVDVLGKFPLPVEVIPMARSYVARELVKLGGLPEYRENVVTDNGNVILDVYNLTILNPIELENKINSIAGVVTVGLFANRGADIVLMGTSEGVKTIK
>NZ_CP021852.1|WP_004248535.1|3555234_3556485_+|phosphoglycerate-dehydrogenase
MVKVSLEKEKIKFLLLEGVHQSAVENLRAAGYTNIEYHKGALSGEELKQAIRDARFVGIRSRTHLTEEIFAAAEKLVAVGCFCIGTNQVDLDAAARRGIPVFNAPFSNTRSVAEMVLGELLLLLRRIPEANAKAHRGIWDKQAKGCFEARGKKLGIIGYGHIGTQLGILAESVGLDVYFYDIENKLPLGNATQVRHLSELLNMCDIVSLHVPETPSTKNMIGHEELLRMKPGAILINASRGTVVDIPALAQALESKHLSGAAVDVFPTEPGANNDPNDPFVSELIKFDNVILTPHIGGSTQEAQENIGYEVAGKLAKYSDNGSTLSAVNFPEVSLPSHGDDVNRLLHIHENRPGIMNSINNVFTEENINVAAQYLRTAGNVGYVVIDVTTQTKAQAELVLQKLKGLPGTIRARMLY

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP021852_1	1.6\|501724\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501724-501755	32	NZ_CP021852.1	678917-678948	0	1.0
NZ_CP021852_1	1.6\|501724\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501724-501755	32	NZ_CP021852.1	3720315-3720346	0	1.0
NZ_CP021852_2	2.2\|510779\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	510779-510810	32	NZ_CP021852.1	2755708-2755739	1	0.969
NZ_CP021852_2	2.4\|510901\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	510901-510932	32	NZ_CP021852.1	2764912-2764943	0	1.0
NZ_CP021852_2	2.7\|511084\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511084-511115	32	NZ_CP021852.1	745121-745152	0	1.0

1. spacer 1.6|501724|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to position: 678917-678948, mismatch: 0, identity: 1.0

ttaactttaaccctgacgaacgtctacgggtt	CRISPR spacer
ttaactttaaccctgacgaacgtctacgggtt	Protospacer
********************************

2. spacer 1.6|501724|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to position: 3720315-3720346, mismatch: 0, identity: 1.0

ttaactttaaccctgacgaacgtctacgggtt	CRISPR spacer
ttaactttaaccctgacgaacgtctacgggtt	Protospacer
********************************

3. spacer 2.2|510779|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to position: 2755708-2755739, mismatch: 1, identity: 0.969

gacacctgtattgtctgtaatcgagagactga	CRISPR spacer
gacacctgtattgtctgtaatcgatagactga	Protospacer
************************ *******

4. spacer 2.4|510901|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to position: 2764912-2764943, mismatch: 0, identity: 1.0

aaagaaatccctgaacaagatgcggtttacac	CRISPR spacer
aaagaaatccctgaacaagatgcggtttacac	Protospacer
********************************

5. spacer 2.7|511084|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to position: 745121-745152, mismatch: 0, identity: 1.0

attgacagttatattatgtctatacttttggc	CRISPR spacer
attgacagttatattatgtctatacttttggc	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP021852_1	1.1\|501419\|32\|NZ_CP021852\|CRISPRCasFinder,CRT	501419-501450	32	NZ_CP047287	Proteus cibarius strain G11 plasmid p52, complete sequence	26813-26844	0	1.0
NZ_CP021852_1	1.1\|501419\|32\|NZ_CP021852\|CRISPRCasFinder,CRT	501419-501450	32	NZ_CP047287	Proteus cibarius strain G11 plasmid p52, complete sequence	29782-29813	0	1.0
NZ_CP021852_1	1.1\|501419\|32\|NZ_CP021852\|CRISPRCasFinder,CRT	501419-501450	32	NZ_CP053373	Proteus cibarius strain G32 plasmid pG32-51, complete sequence	23124-23155	0	1.0
NZ_CP021852_1	1.1\|501419\|32\|NZ_CP021852\|CRISPRCasFinder,CRT	501419-501450	32	NZ_CP053373	Proteus cibarius strain G32 plasmid pG32-51, complete sequence	26093-26124	0	1.0
NZ_CP021852_1	1.1\|501419\|32\|NZ_CP021852\|CRISPRCasFinder,CRT	501419-501450	32	NZ_CP047341	Proteus cibarius strain ZF1 plasmid pZF1-cfr, complete sequence	7058-7089	0	1.0
NZ_CP021852_1	1.1\|501419\|32\|NZ_CP021852\|CRISPRCasFinder,CRT	501419-501450	32	NZ_CP047341	Proteus cibarius strain ZF1 plasmid pZF1-cfr, complete sequence	10027-10058	0	1.0
NZ_CP021852_1	1.1\|501419\|32\|NZ_CP021852\|CRISPRCasFinder,CRT	501419-501450	32	NZ_CP045009	Proteus cibarius strain ZF2 plasmid pZF2-cfr, complete sequence	24388-24419	0	1.0
NZ_CP021852_1	1.1\|501419\|32\|NZ_CP021852\|CRISPRCasFinder,CRT	501419-501450	32	NZ_CP045009	Proteus cibarius strain ZF2 plasmid pZF2-cfr, complete sequence	27357-27388	0	1.0
NZ_CP021852_2	2.3\|510840\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	510840-510871	32	MK047640	Phage NV18, complete genome	3609-3640	0	1.0
NZ_CP021852_1	1.3\|501541\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501541-501572	32	MK047640	Phage NV18, complete genome	10567-10598	1	0.969
NZ_CP021852_1	1.3\|501541\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501541-501572	32	KY420199	Proteus phage vB_PvuS_Pm34, complete genome	5097-5128	1	0.969
NZ_CP021852_1	1.6\|501724\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501724-501755	32	MK047642	Phage NG55, complete genome	38691-38722	1	0.969
NZ_CP021852_1	1.2\|501480\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501480-501511	32	KY420199	Proteus phage vB_PvuS_Pm34, complete genome	6559-6590	2	0.938
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_CP033935	Chryseobacterium balustinum strain KC_1863 plasmid unnamed, complete sequence	22023-22054	4	0.875
NZ_CP021852_3	3.1\|1748486\|26\|NZ_CP021852\|CRISPRCasFinder	1748486-1748511	26	AP013679	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S29-C55, * SEQUENCING IN PROGRESS *	11017-11042	5	0.808
NZ_CP021852_3	3.1\|1748486\|26\|NZ_CP021852\|CRISPRCasFinder	1748486-1748511	26	AP013683	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S40-C57, * SEQUENCING IN PROGRESS *	20438-20463	5	0.808
NZ_CP021852_3	3.1\|1748486\|26\|NZ_CP021852\|CRISPRCasFinder	1748486-1748511	26	AP013684	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S44-C58, * SEQUENCING IN PROGRESS *	20318-20343	5	0.808
NZ_CP021852_3	3.1\|1748486\|26\|NZ_CP021852\|CRISPRCasFinder	1748486-1748511	26	AP013686	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S46-C68, * SEQUENCING IN PROGRESS *	2865-2890	5	0.808
NZ_CP021852_3	3.1\|1748486\|26\|NZ_CP021852\|CRISPRCasFinder	1748486-1748511	26	AP013682	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S36-C62, * SEQUENCING IN PROGRESS *	22388-22413	5	0.808
NZ_CP021852_3	3.1\|1748486\|26\|NZ_CP021852\|CRISPRCasFinder	1748486-1748511	26	AP013421	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C49A-MedDCM-OCT-S31-C44	19607-19632	5	0.808
NZ_CP021852_3	3.1\|1748486\|26\|NZ_CP021852\|CRISPRCasFinder	1748486-1748511	26	AP013677	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S25-C56, * SEQUENCING IN PROGRESS *	1978-2003	5	0.808
NZ_CP021852_3	3.1\|1748486\|26\|NZ_CP021852\|CRISPRCasFinder	1748486-1748511	26	AP013680	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S32-C153, * SEQUENCING IN PROGRESS *	6121-6146	5	0.808
NZ_CP021852_3	3.1\|1748486\|26\|NZ_CP021852\|CRISPRCasFinder	1748486-1748511	26	AP013685	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S45-C58, * SEQUENCING IN PROGRESS *	17873-17898	5	0.808
NZ_CP021852_3	3.1\|1748486\|26\|NZ_CP021852\|CRISPRCasFinder	1748486-1748511	26	AP013676	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S24-C47, * SEQUENCING IN PROGRESS *	20000-20025	5	0.808
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	MK614706	Gammaproteobacteria virus GOV_bin_2604, complete genome	44103-44134	6	0.812
NZ_CP021852_1	1.5\|501663\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501663-501694	32	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	13629-13660	7	0.781
NZ_CP021852_1	1.5\|501663\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501663-501694	32	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	223656-223687	7	0.781
NZ_CP021852_1	1.5\|501663\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501663-501694	32	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	158496-158527	7	0.781
NZ_CP021852_2	2.5\|510962\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	510962-510993	32	MT325768	Psychrobacillus phage Perkons, complete genome	104301-104332	7	0.781
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NC_031922	Synechococcus phage S-CAM9 isolate 1109NB16, complete genome	145157-145188	7	0.781
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	KU686204	Synechococcus phage S-CAM9 isolate 0808SB05, complete genome	145139-145170	7	0.781
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	KU686205	Synechococcus phage S-CAM9 isolate 0908SB82, complete genome	144986-145017	7	0.781
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	MF417902	Uncultured Caudovirales phage clone 8F_8, partial genome	18237-18268	7	0.781
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_CP013995	Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence	55288-55319	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_CP027518	Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence	175628-175659	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135334	Enterococcus faecium isolate E7471 plasmid 4	37076-37107	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135340	Enterococcus faecium isolate E7356 plasmid 2	175057-175088	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135279	Enterococcus faecium isolate E6975 plasmid 2	19637-19668	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135783	Enterococcus faecium isolate E4239 plasmid 2	50179-50210	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135294	Enterococcus faecium isolate E7237 plasmid 2	44118-44149	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135198	Enterococcus faecium isolate E6055 plasmid 2	55379-55410	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NC_021995	Enterococcus faecium Aus0085 plasmid p2, complete sequence	50478-50509	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135429	Enterococcus faecium isolate E8927 plasmid 2	48083-48114	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135436	Enterococcus faecium isolate E8691 plasmid 2	52124-52155	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135476	Enterococcus faecium isolate E8423 plasmid 2	176505-176536	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135204	Enterococcus faecium isolate E7171 plasmid 2	47809-47840	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135175	Enterococcus faecium isolate E4402 plasmid 2	47536-47567	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135358	Enterococcus faecium isolate E7948 plasmid 2	194783-194814	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_AP019395	Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence	45979-46010	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_CP045013	Enterococcus faecium strain LAC7.2 plasmid pI, complete sequence	46348-46379	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_CP040741	Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence	189779-189810	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_CP035655	Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence	52038-52069	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_CP035649	Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence	52039-52070	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135171	Enterococcus faecium isolate E4227 plasmid 2	50179-50210	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LR135193	Enterococcus faecium isolate E4438 plasmid 3	52129-52160	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_LT598666	Enterococcus faecium isolate Ef_aus00233 plasmid 4	50486-50517	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	MN693250	Marine virus AFVG_25M507, complete genome	27781-27812	8	0.75
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	MN693511	Marine virus AFVG_25M216, complete genome	10226-10257	8	0.75
NZ_CP021852_1	1.5\|501663\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501663-501694	32	NZ_CP011038	Pseudoalteromonas nigrifaciens strain KMM 661 plasmid unnamed, complete sequence	34780-34811	9	0.719
NZ_CP021852_1	1.5\|501663\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501663-501694	32	KU686203	Synechococcus phage S-CAM8 isolate 0810PA29, complete genome	85055-85086	9	0.719
NZ_CP021852_1	1.5\|501663\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501663-501694	32	JF974299	Synechococcus phage S-CAM8 strain 0608SB47, * SEQUENCING IN PROGRESS *, 4 unordered pieces	34327-34358	9	0.719
NZ_CP021852_1	1.5\|501663\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501663-501694	32	NC_021530	Synechococcus phage S-CAM8 strain S-CAM8 06008BI06, complete genome	85210-85241	9	0.719
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	395033-395064	9	0.719
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	AP014051	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12B-MedDCM-OCT-S26-C131, * SEQUENCING IN PROGRESS *	8604-8635	9	0.719
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	AP013399	Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-U-MedDCM-OCT-S40-C42	16202-16233	9	0.719
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	AP014483	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12B-MedDCM-OCT-S39-C115, * SEQUENCING IN PROGRESS *, 2 ordered pieces	17979-18010	9	0.719
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	AP014052	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12B-MedDCM-OCT-S27-C13, * SEQUENCING IN PROGRESS *	31069-31100	9	0.719
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	MK448912	Streptococcus phage Javan340, complete genome	6344-6375	9	0.719
NZ_CP021852_2	2.7\|511084\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511084-511115	32	NZ_CP003562	Flammeovirga sp. MY04 plasmid unnamed, complete sequence	74190-74221	9	0.719
NZ_CP021852_2	2.6\|511023\|32\|NZ_CP021852\|PILER-CR,CRISPRCasFinder,CRT	511023-511054	32	MN693406	Marine virus AFVG_25M259, complete genome	23781-23812	10	0.688

1. spacer 1.1|501419|32|NZ_CP021852|CRISPRCasFinder,CRT matches to NZ_CP047287 (Proteus cibarius strain G11 plasmid p52, complete sequence) position: , mismatch: 0, identity: 1.0

aatcctgctcgactttttaaagccgtggataa	CRISPR spacer
aatcctgctcgactttttaaagccgtggataa	Protospacer
********************************

2. spacer 1.1|501419|32|NZ_CP021852|CRISPRCasFinder,CRT matches to NZ_CP047287 (Proteus cibarius strain G11 plasmid p52, complete sequence) position: , mismatch: 0, identity: 1.0

aatcctgctcgactttttaaagccgtggataa	CRISPR spacer
aatcctgctcgactttttaaagccgtggataa	Protospacer
********************************

3. spacer 1.1|501419|32|NZ_CP021852|CRISPRCasFinder,CRT matches to NZ_CP053373 (Proteus cibarius strain G32 plasmid pG32-51, complete sequence) position: , mismatch: 0, identity: 1.0

aatcctgctcgactttttaaagccgtggataa	CRISPR spacer
aatcctgctcgactttttaaagccgtggataa	Protospacer
********************************

4. spacer 1.1|501419|32|NZ_CP021852|CRISPRCasFinder,CRT matches to NZ_CP053373 (Proteus cibarius strain G32 plasmid pG32-51, complete sequence) position: , mismatch: 0, identity: 1.0

aatcctgctcgactttttaaagccgtggataa	CRISPR spacer
aatcctgctcgactttttaaagccgtggataa	Protospacer
********************************

5. spacer 1.1|501419|32|NZ_CP021852|CRISPRCasFinder,CRT matches to NZ_CP047341 (Proteus cibarius strain ZF1 plasmid pZF1-cfr, complete sequence) position: , mismatch: 0, identity: 1.0

aatcctgctcgactttttaaagccgtggataa	CRISPR spacer
aatcctgctcgactttttaaagccgtggataa	Protospacer
********************************

6. spacer 1.1|501419|32|NZ_CP021852|CRISPRCasFinder,CRT matches to NZ_CP047341 (Proteus cibarius strain ZF1 plasmid pZF1-cfr, complete sequence) position: , mismatch: 0, identity: 1.0

aatcctgctcgactttttaaagccgtggataa	CRISPR spacer
aatcctgctcgactttttaaagccgtggataa	Protospacer
********************************

7. spacer 1.1|501419|32|NZ_CP021852|CRISPRCasFinder,CRT matches to NZ_CP045009 (Proteus cibarius strain ZF2 plasmid pZF2-cfr, complete sequence) position: , mismatch: 0, identity: 1.0

aatcctgctcgactttttaaagccgtggataa	CRISPR spacer
aatcctgctcgactttttaaagccgtggataa	Protospacer
********************************

8. spacer 1.1|501419|32|NZ_CP021852|CRISPRCasFinder,CRT matches to NZ_CP045009 (Proteus cibarius strain ZF2 plasmid pZF2-cfr, complete sequence) position: , mismatch: 0, identity: 1.0

aatcctgctcgactttttaaagccgtggataa	CRISPR spacer
aatcctgctcgactttttaaagccgtggataa	Protospacer
********************************

9. spacer 2.3|510840|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 0, identity: 1.0

ccaattgttcccgtgtatggtgagtggtcatt	CRISPR spacer
ccaattgttcccgtgtatggtgagtggtcatt	Protospacer
********************************

10. spacer 1.3|501541|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.969

tcttcaatagctgcgataaagtcagtgaacat	CRISPR spacer
tcttcaatagctgcgattaagtcagtgaacat	Protospacer
***************** **************

11. spacer 1.3|501541|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to KY420199 (Proteus phage vB_PvuS_Pm34, complete genome) position: , mismatch: 1, identity: 0.969

tcttcaatagctgcgataaagtcagtgaacat	CRISPR spacer
tcttcaatagctgcgattaagtcagtgaacat	Protospacer
***************** **************

12. spacer 1.6|501724|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to MK047642 (Phage NG55, complete genome) position: , mismatch: 1, identity: 0.969

ttaactttaaccctgacgaacgtctacgggtt	CRISPR spacer
ttaacttcaaccctgacgaacgtctacgggtt	Protospacer
*******.************************

13. spacer 1.2|501480|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to KY420199 (Proteus phage vB_PvuS_Pm34, complete genome) position: , mismatch: 2, identity: 0.938

atatcgaccacctcataacctaagaatgtatg	CRISPR spacer
atatcgaccgcctcataacctaggaatgtatg	Protospacer
*********.************.*********

14. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033935 (Chryseobacterium balustinum strain KC_1863 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.875

--ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
ttttcaat--aaaattttcatcacgatcaatggt	Protospacer
  ******  ************* ** *******

15. spacer 3.1|1748486|26|NZ_CP021852|CRISPRCasFinder matches to AP013679 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S29-C55, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.808

ctgggcttcttcttcagctaaacgca	CRISPR spacer
ttctgctttttcttcagctaaacgct	Protospacer
.*  ****.****************

16. spacer 3.1|1748486|26|NZ_CP021852|CRISPRCasFinder matches to AP013683 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S40-C57, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.808

ctgggcttcttcttcagctaaacgca	CRISPR spacer
ttctgctttttcttcagctaaacgct	Protospacer
.*  ****.****************

17. spacer 3.1|1748486|26|NZ_CP021852|CRISPRCasFinder matches to AP013684 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S44-C58, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.808

ctgggcttcttcttcagctaaacgca	CRISPR spacer
ttctgctttttcttcagctaaacgct	Protospacer
.*  ****.****************

18. spacer 3.1|1748486|26|NZ_CP021852|CRISPRCasFinder matches to AP013686 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S46-C68, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.808

ctgggcttcttcttcagctaaacgca	CRISPR spacer
ttctgctttttcttcagctaaacgct	Protospacer
.*  ****.****************

19. spacer 3.1|1748486|26|NZ_CP021852|CRISPRCasFinder matches to AP013682 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S36-C62, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.808

ctgggcttcttcttcagctaaacgca	CRISPR spacer
ttctgctttttcttcagctaaacgct	Protospacer
.*  ****.****************

20. spacer 3.1|1748486|26|NZ_CP021852|CRISPRCasFinder matches to AP013421 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C49A-MedDCM-OCT-S31-C44) position: , mismatch: 5, identity: 0.808

ctgggcttcttcttcagctaaacgca	CRISPR spacer
ttctgctttttcttcagctaaacgct	Protospacer
.*  ****.****************

21. spacer 3.1|1748486|26|NZ_CP021852|CRISPRCasFinder matches to AP013677 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S25-C56, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.808

ctgggcttcttcttcagctaaacgca	CRISPR spacer
ttctgctttttcttcagctaaacgct	Protospacer
.*  ****.****************

22. spacer 3.1|1748486|26|NZ_CP021852|CRISPRCasFinder matches to AP013680 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S32-C153, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.808

ctgggcttcttcttcagctaaacgca	CRISPR spacer
ttctgctttttcttcagctaaacgct	Protospacer
.*  ****.****************

23. spacer 3.1|1748486|26|NZ_CP021852|CRISPRCasFinder matches to AP013685 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S45-C58, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.808

ctgggcttcttcttcagctaaacgca	CRISPR spacer
ttctgctttttcttcagctaaacgct	Protospacer
.*  ****.****************

24. spacer 3.1|1748486|26|NZ_CP021852|CRISPRCasFinder matches to AP013676 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C49A-MedDCM-OCT-S24-C47, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.808

ctgggcttcttcttcagctaaacgca	CRISPR spacer
ttctgctttttcttcagctaaacgct	Protospacer
.*  ****.****************

25. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to MK614706 (Gammaproteobacteria virus GOV_bin_2604, complete genome) position: , mismatch: 6, identity: 0.812

ttcaatt---caaaattttcatcaagaacaatggt	CRISPR spacer
---aattttactaaatttttatcaataacaatggt	Protospacer
   ****   * *******.***** *********

26. spacer 1.5|501663|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 7, identity: 0.781

taccaa--atctgtgtttgatcatttttaaattc	CRISPR spacer
--ataattatctgtgtttcattatttttaaattt	Protospacer
   .**  ********** **.***********.

27. spacer 1.5|501663|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 7, identity: 0.781

taccaa--atctgtgtttgatcatttttaaattc	CRISPR spacer
--ataattatctgtgtttcattatttttaaattt	Protospacer
   .**  ********** **.***********.

28. spacer 1.5|501663|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 7, identity: 0.781

taccaa--atctgtgtttgatcatttttaaattc	CRISPR spacer
--ataattatctgtgtttcattatttttaaattt	Protospacer
   .**  ********** **.***********.

29. spacer 2.5|510962|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to MT325768 (Psychrobacillus phage Perkons, complete genome) position: , mismatch: 7, identity: 0.781

aaatatatataagaagtattgaattctgtttc---	CRISPR spacer
gaatatatatcagaagtatttaa---tatttcaaa	Protospacer
.********* ********* **   *.****

30. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NC_031922 (Synechococcus phage S-CAM9 isolate 1109NB16, complete genome) position: , mismatch: 7, identity: 0.781

ttcaattcaaaattttcatcaagaacaatggt-	CRISPR spacer
actaattcaaaattttcagtaagaac-atagta	Protospacer
 ..*************** .****** **.**

31. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to KU686204 (Synechococcus phage S-CAM9 isolate 0808SB05, complete genome) position: , mismatch: 7, identity: 0.781

ttcaattcaaaattttcatcaagaacaatggt-	CRISPR spacer
actaattcaaaattttcagtaagaac-atagta	Protospacer
 ..*************** .****** **.**

32. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to KU686205 (Synechococcus phage S-CAM9 isolate 0908SB82, complete genome) position: , mismatch: 7, identity: 0.781

ttcaattcaaaattttcatcaagaacaatggt-	CRISPR spacer
actaattcaaaattttcagtaagaac-atagta	Protospacer
 ..*************** .****** **.**

33. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to MF417902 (Uncultured Caudovirales phage clone 8F_8, partial genome) position: , mismatch: 7, identity: 0.781

ttcaattcaaaattttcatcaagaacaatggt-	CRISPR spacer
tacaattcaaaatttttatgaagaat-atgaca	Protospacer
* **************.** *****. ***..

34. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013995 (Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

35. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027518 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

36. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135334 (Enterococcus faecium isolate E7471 plasmid 4) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

37. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135340 (Enterococcus faecium isolate E7356 plasmid 2) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

38. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135279 (Enterococcus faecium isolate E6975 plasmid 2) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

39. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135783 (Enterococcus faecium isolate E4239 plasmid 2) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

40. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135294 (Enterococcus faecium isolate E7237 plasmid 2) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

41. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135198 (Enterococcus faecium isolate E6055 plasmid 2) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

42. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NC_021995 (Enterococcus faecium Aus0085 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

43. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135429 (Enterococcus faecium isolate E8927 plasmid 2) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

44. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135436 (Enterococcus faecium isolate E8691 plasmid 2) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

45. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135476 (Enterococcus faecium isolate E8423 plasmid 2) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

46. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135204 (Enterococcus faecium isolate E7171 plasmid 2) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

47. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135175 (Enterococcus faecium isolate E4402 plasmid 2) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

48. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135358 (Enterococcus faecium isolate E7948 plasmid 2) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

49. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019395 (Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

50. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045013 (Enterococcus faecium strain LAC7.2 plasmid pI, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

51. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040741 (Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

52. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035655 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

53. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035649 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

54. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135171 (Enterococcus faecium isolate E4227 plasmid 2) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

55. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135193 (Enterococcus faecium isolate E4438 plasmid 3) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

56. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT598666 (Enterococcus faecium isolate Ef_aus00233 plasmid 4) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agcaaatcaaaattttaatcaagaacaagctg	Protospacer
  *** ********** ***********

57. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to MN693250 (Marine virus AFVG_25M507, complete genome) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
tcagattcaaaagtttcttcaagaacaaaact	Protospacer
*. .******** **** ********** . *

58. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to MN693511 (Marine virus AFVG_25M216, complete genome) position: , mismatch: 8, identity: 0.75

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
ttcactccaaaattttcatcaagtcttttgat	Protospacer
**** *.****************  .  **.*

59. spacer 1.5|501663|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011038 (Pseudoalteromonas nigrifaciens strain KMM 661 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

taccaaatctgtgtttgatcatttttaaattc	CRISPR spacer
ttgatgttctgtgtttgataattttttaattg	Protospacer
*    . ************ ****** ****

60. spacer 1.5|501663|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to KU686203 (Synechococcus phage S-CAM8 isolate 0810PA29, complete genome) position: , mismatch: 9, identity: 0.719

taccaaatctgtgtttgatcatttttaaattc	CRISPR spacer
taccaaatctgtctgtgatcattctgcggtct	Protospacer
************ * ********.*  ..*..

61. spacer 1.5|501663|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to JF974299 (Synechococcus phage S-CAM8 strain 0608SB47, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces) position: , mismatch: 9, identity: 0.719

taccaaatctgtgtttgatcatttttaaattc	CRISPR spacer
taccaaatctgtctgtgatcattctgcggtct	Protospacer
************ * ********.*  ..*..

62. spacer 1.5|501663|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to NC_021530 (Synechococcus phage S-CAM8 strain S-CAM8 06008BI06, complete genome) position: , mismatch: 9, identity: 0.719

taccaaatctgtgtttgatcatttttaaattc	CRISPR spacer
taccaaatctgtctgtgatcattctgcggtct	Protospacer
************ * ********.*  ..*..

63. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
agaacatgaaaattttcaccaagaaaaatggg	Protospacer
   *  * **********.****** *****

64. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to AP014051 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12B-MedDCM-OCT-S26-C131, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
tgccattcaaaagtttcatcaagatcatcaag	Protospacer
* * ******** *********** ** ...

65. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to AP013399 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-U-MedDCM-OCT-S40-C42) position: , mismatch: 9, identity: 0.719

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
tcagtttcaaaagtttcctcaagaacaaatgc	Protospacer
*. . ******* **** **********  *.

66. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to AP014483 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12B-MedDCM-OCT-S39-C115, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 9, identity: 0.719

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
tgccattcaaaagtttcatcaagatcatcaag	Protospacer
* * ******** *********** ** ...

67. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to AP014052 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12B-MedDCM-OCT-S27-C13, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
tgccattcaaaagtttcatcaagatcatcaag	Protospacer
* * ******** *********** ** ...

68. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to MK448912 (Streptococcus phage Javan340, complete genome) position: , mismatch: 9, identity: 0.719

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
atatcttcaagattttcatcaataacaagagc	Protospacer
 *   *****.*********** ***** .*.

69. spacer 2.7|511084|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP003562 (Flammeovirga sp. MY04 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

attgacagttatattatgtctatacttttggc	CRISPR spacer
gtaaaatattatattatgtatataattttggt	Protospacer
.* .*  .*********** **** ******.

70. spacer 2.6|511023|32|NZ_CP021852|PILER-CR,CRISPRCasFinder,CRT matches to MN693406 (Marine virus AFVG_25M259, complete genome) position: , mismatch: 10, identity: 0.688

ttcaattcaaaattttcatcaagaacaatggt	CRISPR spacer
aggtattcaaaattttcaacaagcacaacaaa	Protospacer
    ************** **** ****...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

419710 : 436237

Escherichia_phage(21.43%)

lysis,tail,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004243609.1\|419710_420328_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.3e-88	67.8
WP_004243611.1\|420331_421108_+	diguanylate cyclase	A0A077SK59	Escherichia_phage	5.1e-42	39.8
WP_004243612.1\|421223_421766_-	DUF924 domain-containing protein	A0A1V0SIY0	Klosneuvirus	1.9e-19	34.7
WP_017628013.1\|422334_422514_+	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_088206624.1\|422592_423996_-\|tail	tail fiber protein	M1TAS6	Escherichia_phage	7.5e-28	45.9
WP_017628011.1\|424001_424658_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	6.6e-35	39.4
WP_017628010.1\|424654_425842_-	hypothetical protein	A0A2H5BG53	Pseudoalteromonas_phage	1.9e-72	37.7
WP_004243617.1\|425834_426179_-	hypothetical protein	NA	NA	NA	NA
WP_004243621.1\|426175_426868_-	hypothetical protein	A0A2H4P6V3	Pseudomonas_phage	1.2e-29	35.7
WP_004243622.1\|426870_427683_-	hypothetical protein	Q6IWQ0	Burkholderia_phage	9.0e-42	39.2
WP_004243623.1\|427651_427972_-	hypothetical protein	NA	NA	NA	NA
WP_004250719.1\|427984_428473_-	hypothetical protein	NA	NA	NA	NA
WP_088206625.1\|428475_430779_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	4.1e-15	23.3
WP_004243627.1\|430861_431320_-	hypothetical protein	Q6IWV4	Burkholderia_phage	1.9e-25	48.5
WP_004243628.1\|431379_431832_-	hypothetical protein	NA	NA	NA	NA
WP_004248362.1\|431842_433330_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	1.9e-77	35.7
WP_004248364.1\|433338_433851_-	hypothetical protein	NA	NA	NA	NA
WP_088206626.1\|433887_434337_-\|lysis	lysis protein	NA	NA	NA	NA
WP_049203170.1\|434333_434738_-	structural protein	A0A0E3JJ20	Enterobacteria_phage	4.2e-24	45.0
WP_004248367.1\|434740_435040_-\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	1.9e-21	51.0
WP_036918599.1\|435421_436237_-	antitermination protein	M9NZB0	Enterobacteria_phage	2.1e-54	43.3

DBSCAN-SWA_2

523758 : 589936

Salmonella_phage(27.27%)

coat,portal,tail,integrase,tRNA,holin,lysis,terminase

attL 581218:581234|attR 602401:602417

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088207252.1\|523758_524589_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_004243737.1\|524627_525638_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_064505712.1\|525682_526810_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	2.0e-23	29.4
WP_004248400.1\|526958_527744_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004248401.1\|527865_528786_+	DMT family transporter	NA	NA	NA	NA
WP_004243743.1\|529354_530566_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_088206635.1\|530770_532810_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_004248403.1\|532897_533446_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004243747.1\|533547_534444_-	hypothetical protein	NA	NA	NA	NA
WP_004243748.1\|534765_535038_-	YfcL family protein	NA	NA	NA	NA
WP_004243749.1\|535174_535729_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_004243750.1\|535745_536546_-	TSUP family transporter	NA	NA	NA	NA
WP_004243753.1\|536718_537804_-	chorismate synthase	A0A291AU41	Pandoravirus	8.2e-91	48.5
WP_004243756.1\|537892_538825_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_049208153.1\|539219_539774_+	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_004243759.1\|539926_540469_+	endonuclease SmrB	NA	NA	NA	NA
WP_049203530.1\|540511_540997_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_017827874.1\|541430_543599_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_004243765.1\|543598_544903_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_004243769.1\|545139_545436_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_088206636.1\|545781_547152_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_004248410.1\|547227_547971_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_004243775.1\|549292_549988_+	fimbrial protein	NA	NA	NA	NA
WP_088206637.1\|550781_551753_-	hypothetical protein	NA	NA	NA	NA
WP_088206638.1\|551843_554150_-	hypothetical protein	A5VW57	Enterobacteria_phage	8.8e-50	59.9
WP_088206639.1\|554262_556479_-	DNA transfer protein	Q716G2	Shigella_phage	1.3e-146	57.4
WP_088206640.1\|556489_557971_-	DNA transfer protein	A0A1R3Y5Q4	Salmonella_virus	1.1e-82	41.9
WP_088207253.1\|557980_558598_-	DNA transfer protein	A0A2H4FUQ9	Salmonella_phage	1.0e-61	67.3
WP_071233435.1\|558627_559092_-	DUF2824 family protein	Q2A0B3	Sodalis_phage	4.2e-60	71.3
WP_088206641.1\|559091_559790_-\|tail	phage tail protein	Q9AYZ3	Salmonella_phage	1.2e-34	41.2
WP_088207254.1\|559789_561028_-	hypothetical protein	Q9T1S0	Acyrthosiphon_pisum_secondary_endosymbiont_phage	1.7e-145	68.4
WP_088206642.1\|561542_562040_-	recombinase RmuC	A0A2D1GLR5	Escherichia_phage	7.4e-47	61.9
WP_088206643.1\|562017_562221_-	hypothetical protein	NA	NA	NA	NA
WP_088206644.1\|562273_563557_-\|coat	coat protein	A0A2D1GLV2	Escherichia_phage	5.4e-166	66.9
WP_088206645.1\|563556_564471_-	scaffolding protein	A0A192Y6T4	Salmonella_phage	8.2e-92	61.8
WP_088206646.1\|564485_566576_-\|portal	portal protein	A0A2H4FNE2	Salmonella_phage	8.6e-238	66.2
WP_071233444.1\|566578_568075_-\|terminase	terminase	A0A0M4S5Z3	Salmonella_phage	3.1e-266	85.1
WP_036976889.1\|568049_568541_-	DNA-packaging protein	I6S1J2	Salmonella_phage	5.6e-71	79.1
WP_088206647.1\|568549_568909_-	hypothetical protein	R9VYK9	Serratia_phage	9.5e-20	40.5
WP_088206648.1\|568963_569191_-	DUF2560 family protein	A0A192Y6S9	Salmonella_phage	3.9e-11	54.1
WP_088206649.1\|569402_569858_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	1.4e-55	81.4
WP_088206650.1\|569854_570259_-	structural protein	A0A0E3JJ20	Enterobacteria_phage	7.7e-26	46.3
WP_049221519.1\|570251_570599_-\|holin	holin	NA	NA	NA	NA
WP_071425416.1\|570752_571520_-	KilA-N domain-containing protein	NA	NA	NA	NA
WP_088206651.1\|571838_572594_-	antitermination protein	Q76H66	Enterobacteria_phage	4.2e-49	48.8
WP_088206652.1\|572793_573414_-	hypothetical protein	A0A2I7RAC0	Vibrio_phage	1.6e-46	54.1
WP_088206653.1\|573525_574188_-	serine/threonine-protein phosphatase	K7P721	Enterobacteria_phage	9.5e-74	61.9
WP_088206654.1\|574184_574397_-	hypothetical protein	NA	NA	NA	NA
WP_036963872.1\|574587_575037_-	hypothetical protein	A0A2I7R9W3	Vibrio_phage	6.4e-13	35.1
WP_088206656.1\|575060_575453_-	HNH endonuclease	C6ZR29	Salmonella_phage	1.4e-45	60.4
WP_088206657.1\|575449_575695_-	hypothetical protein	NA	NA	NA	NA
WP_049203713.1\|575681_575975_-	hypothetical protein	NA	NA	NA	NA
WP_088207255.1\|575994_577362_-	replicative DNA helicase	I6R0N4	Salmonella_phage	2.5e-161	64.2
WP_088206658.1\|577365_578202_-	replication protein	A0A1R3Y5R9	Salmonella_virus	1.2e-60	52.3
WP_070486784.1\|578462_578843_-	hypothetical protein	NA	NA	NA	NA
WP_088206659.1\|578977_579163_-	hypothetical protein	NA	NA	NA	NA
WP_088206660.1\|579270_579972_+	helix-turn-helix transcriptional regulator	G8C7L8	Escherichia_phage	4.4e-45	45.8
WP_088206661.1\|580002_580308_+	hypothetical protein	NA	NA	NA	NA
WP_064506001.1\|580827_581100_+	hypothetical protein	NA	NA	NA	NA
WP_049216805.1\|581114_581432_+	hypothetical protein	NA	NA	NA	NA
581218:581234	attL	NA	NA	NA	NA
WP_061064261.1\|581443_581980_-	hypothetical protein	NA	NA	NA	NA
WP_088206662.1\|582146_582335_+	hypothetical protein	NA	NA	NA	NA
WP_088207256.1\|582399_582588_+	hypothetical protein	A0A1P8DTG4	Proteus_phage	4.7e-10	54.8
WP_157677989.1\|582589_582733_+	hypothetical protein	NA	NA	NA	NA
WP_088206663.1\|582807_583749_+	cell envelope biogenesis protein TolA	A0A2I7QK72	Vibrio_phage	4.6e-21	47.3
WP_063693270.1\|583971_584247_+	hypothetical protein	NA	NA	NA	NA
WP_088206664.1\|584392_584713_+	hypothetical protein	NA	NA	NA	NA
WP_088206665.1\|584714_585329_+	single-stranded DNA-binding protein	A0A1W6JP21	Morganella_phage	1.7e-85	77.5
WP_088206666.1\|585328_585856_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	9.6e-53	78.4
WP_153274246.1\|585858_586020_+	hypothetical protein	NA	NA	NA	NA
WP_036900985.1\|586059_586260_+	hypothetical protein	NA	NA	NA	NA
WP_155731339.1\|586295_586469_+	hypothetical protein	NA	NA	NA	NA
WP_088206667.1\|586478_586793_+	hypothetical protein	NA	NA	NA	NA
WP_088206668.1\|586785_587022_+	hypothetical protein	NA	NA	NA	NA
WP_088206669.1\|587179_587545_+	DUF2528 family protein	NA	NA	NA	NA
WP_088206670.1\|587548_587767_+	hypothetical protein	NA	NA	NA	NA
WP_088206671.1\|587756_588302_+	phage N-6-adenine-methyltransferase	A0A1W6JP96	Morganella_phage	1.8e-57	61.5
WP_036905342.1\|588591_588783_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_088206673.1\|588760_589936_-\|integrase	site-specific integrase	G3CFG6	Escherichia_phage	5.8e-183	76.5
602401:602417	attR	NA	NA	NA	NA

DBSCAN-SWA_3

674946 : 746980

Pectobacterium_phage(20.93%)

head,protease,tRNA,holin,lysis,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004248453.1\|674946_675477_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	1.4e-06	31.5
WP_036895334.1\|676028_676274_+	DinI-like family protein	NA	NA	NA	NA
WP_088206681.1\|676298_676565_+	hypothetical protein	NA	NA	NA	NA
WP_060557908.1\|676643_677381_+	glycosyltransferase family 25 protein	A0A1V0SKJ4	Klosneuvirus	1.3e-07	31.5
WP_088206682.1\|677414_678782_-	hypothetical protein	Q6IWQ6	Burkholderia_phage	2.9e-16	36.1
WP_004250603.1\|678787_679444_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	7.5e-39	40.3
WP_088206683.1\|679440_680628_-	hypothetical protein	Q6IWQ3	Burkholderia_phage	8.8e-70	40.6
WP_004250600.1\|680620_680965_-	hypothetical protein	NA	NA	NA	NA
WP_049221471.1\|680961_681654_-	hypothetical protein	A0A2H4P6V3	Pseudomonas_phage	1.2e-29	40.7
WP_087740814.1\|681656_682472_-	hypothetical protein	A1Z005	Burkholderia_virus	1.1e-10	26.3
WP_020945489.1\|682437_682755_-	hypothetical protein	Q6IWP9	Burkholderia_phage	3.3e-08	32.3
WP_087740815.1\|682754_683282_-	hypothetical protein	NA	NA	NA	NA
WP_087740816.1\|683283_685635_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	2.6e-17	28.8
WP_004250588.1\|685718_686177_-	hypothetical protein	Q6IWV4	Burkholderia_phage	6.7e-26	48.5
WP_004250586.1\|686217_686670_-	hypothetical protein	I7ATP4	Escherichia_phage	5.8e-22	38.1
WP_088206684.1\|686680_688168_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	6.6e-83	37.9
WP_088206685.1\|688176_688692_-	hypothetical protein	NA	NA	NA	NA
WP_020945484.1\|688678_689050_-	hypothetical protein	NA	NA	NA	NA
WP_088206686.1\|689049_689508_-	hypothetical protein	Q6IWU9	Burkholderia_phage	1.1e-12	39.6
WP_088206687.1\|689507_689939_-	DUF4054 domain-containing protein	Q6IWU8	Burkholderia_phage	2.6e-11	32.4
WP_004250579.1\|689941_690283_-	hypothetical protein	Q6IWU7	Burkholderia_phage	2.7e-08	33.6
WP_004250578.1\|690352_691420_-	DUF2184 domain-containing protein	A0A088C493	Shewanella_sp._phage	1.1e-52	39.3
WP_036908136.1\|691419_691917_-	hypothetical protein	NA	NA	NA	NA
WP_036896149.1\|693170_693884_-\|head	head protein	A0A2H5BG15	Pseudoalteromonas_phage	1.1e-32	34.7
WP_088206688.1\|693921_695424_-	DUF1073 domain-containing protein	A0A2H4P6S9	Pseudomonas_phage	6.0e-100	42.0
WP_088206689.1\|695427_696825_-\|terminase	phage terminase large subunit	A0A2K9V3I6	Faecalibacterium_phage	2.1e-83	40.3
WP_088206690.1\|697023_698043_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	8.4e-37	34.9
WP_088206691.1\|698533_698980_-\|lysis	lysis protein	NA	NA	NA	NA
WP_088207258.1\|698985_699339_-	M15 family metallopeptidase	A0A1P8DTE2	Proteus_phage	5.1e-42	79.8
WP_088207259.1\|699370_699676_-\|holin	holin	F1C5D1	Cronobacter_phage	5.1e-22	52.4
WP_088206692.1\|699967_700537_-	hypothetical protein	NA	NA	NA	NA
WP_088207260.1\|700850_701885_-	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	3.7e-141	71.1
WP_004250554.1\|702039_702237_-	hypothetical protein	Q9MC00	Enterobacteria_phage	1.1e-09	65.4
WP_049211165.1\|702399_702933_-	antiterminator	Q5TJL7	Enterobacteria_phage	6.1e-39	51.9
WP_049211163.1\|702920_703232_-	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	5.9e-34	68.8
WP_049211162.1\|703243_703837_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	5.6e-57	54.2
WP_049211160.1\|703973_704837_+	hypothetical protein	NA	NA	NA	NA
WP_049211158.1\|704898_705237_-	hypothetical protein	H9C172	Pectobacterium_phage	1.3e-29	57.0
WP_049211157.1\|705292_706711_-	AAA family ATPase	H9C165	Pectobacterium_phage	1.8e-170	61.2
WP_053087953.1\|706700_707531_-	hypothetical protein	H9C164	Pectobacterium_phage	4.4e-36	59.3
WP_004250533.1\|707532_707757_-	hypothetical protein	H9C163	Pectobacterium_phage	9.5e-18	55.4
WP_020945464.1\|707774_708230_-	hypothetical protein	H9C162	Pectobacterium_phage	9.9e-30	55.4
WP_004250529.1\|708270_708528_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004250527.1\|708632_709391_+	helix-turn-helix transcriptional regulator	A0A0M3LPF9	Mannheimia_phage	1.5e-27	39.0
WP_049199468.1\|709847_710180_+	hypothetical protein	H9C158	Pectobacterium_phage	1.6e-05	39.2
WP_088206693.1\|710192_712160_+	hypothetical protein	H9C157	Pectobacterium_phage	1.7e-118	39.5
WP_020945462.1\|712159_712660_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	3.6e-41	57.0
WP_004250516.1\|712707_712887_+	hypothetical protein	NA	NA	NA	NA
WP_036908179.1\|713327_713525_+	hypothetical protein	H9C154	Pectobacterium_phage	1.2e-05	44.4
WP_036908181.1\|713499_713712_+	hypothetical protein	NA	NA	NA	NA
WP_049211155.1\|713713_714889_+	recombinase	A0A2H4J1K3	uncultured_Caudovirales_phage	2.7e-31	29.2
WP_049211154.1\|715077_715950_+	hypothetical protein	NA	NA	NA	NA
WP_088206694.1\|716596_717223_+	LysE family translocator	NA	NA	NA	NA
WP_004247030.1\|717335_717914_-	serine hydrolase family protein	NA	NA	NA	NA
WP_004247028.1\|718513_718762_+	hypothetical protein	NA	NA	NA	NA
WP_088206695.1\|718763_719510_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_004247024.1\|720761_721256_-	hypothetical protein	NA	NA	NA	NA
WP_004247023.1\|721401_722157_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004247022.1\|722421_723348_-	LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase	A0A1W6JP29	Morganella_phage	2.7e-98	65.5
WP_004247021.1\|723803_724016_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	1.1e-26	81.4
WP_004247020.1\|724430_725288_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_004247019.1\|725581_725914_-	lysozyme inhibitor	NA	NA	NA	NA
WP_004247018.1\|726265_727162_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_026090480.1\|727240_728737_-	C69 family dipeptidase	NA	NA	NA	NA
WP_036908191.1\|729298_730102_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	1.1e-42	39.1
WP_036971038.1\|730158_731055_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004247011.1\|731199_731505_-	chaperone modulator CbpM	NA	NA	NA	NA
WP_004247010.1\|731504_732449_-	curved DNA-binding protein	A0A1V0SCV5	Indivirus	1.3e-07	45.3
WP_036908195.1\|732804_733137_+	DUF1971 domain-containing protein	NA	NA	NA	NA
WP_063215315.1\|733139_733484_+	DUF1869 domain-containing protein	NA	NA	NA	NA
WP_004247007.1\|733717_734248_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004244693.1\|734706_735036_+	sulfurtransferase TusE	NA	NA	NA	NA
WP_088206696.1\|735038_735323_-	acylphosphatase	NA	NA	NA	NA
WP_036896040.1\|735525_735843_+	heat shock protein HspQ	NA	NA	NA	NA
WP_088206697.1\|735906_736320_-	CoA-binding protein	NA	NA	NA	NA
WP_004244689.1\|736459_736918_+	methylglyoxal synthase	NA	NA	NA	NA
WP_088206698.1\|736922_738974_-	DNA helicase IV	A7KV33	Bacillus_phage	5.1e-17	25.4
WP_036920066.1\|741392_742007_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_004247687.1\|742233_742788_+	cell division inhibitor SulA	NA	NA	NA	NA
WP_004247686.1\|743136_744225_+	porin OmpA	NA	NA	NA	NA
WP_004244682.1\|744389_744857_-	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_049210227.1\|745237_746980_+\|protease	Lon protease family protein	NA	NA	NA	NA

DBSCAN-SWA_4

794841 : 872711

Bacillus_phage(18.75%)

plate,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004244624.1\|794841_795273_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_012367723.1\|795280_797056_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004244621.1\|797019_798057_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_036932298.1\|798061_799330_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_004244619.1\|799331_799883_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_017628433.1\|799875_801243_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_088206704.1\|801235_801991_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_088206705.1\|801999_804711_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.4e-83	30.4
WP_004244614.1\|804714_805503_+	hypothetical protein	NA	NA	NA	NA
WP_004244612.1\|805504_806155_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_004244611.1\|806160_807624_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004244610.1\|807626_811175_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004244609.1\|811212_812568_+	membrane protein	NA	NA	NA	NA
WP_004244608.1\|812560_814297_+	type VI secretion protein	NA	NA	NA	NA
WP_004244607.1\|814387_814861_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_004247640.1\|814953_815604_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_004244605.1\|815653_816202_-	YcbK family protein	NA	NA	NA	NA
WP_004251995.1\|816533_818249_-	L,D-transpeptidase	NA	NA	NA	NA
WP_004247637.1\|818605_819319_-	class B acid phosphatase	NA	NA	NA	NA
WP_088206706.1\|819542_824006_-	chromosome partition protein MukB	NA	NA	NA	NA
WP_004247634.1\|824002_824734_-	chromosome partition protein MukE	NA	NA	NA	NA
WP_004244597.1\|824714_826037_-	chromosome partition protein MukF	NA	NA	NA	NA
WP_004247633.1\|826046_826820_-\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_004247632.1\|827199_828030_+	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_004244594.1\|828152_828914_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_004244593.1\|828918_829098_-	hypothetical protein	NA	NA	NA	NA
WP_004247631.1\|829512_829728_-	cold shock domain-containing protein	NA	NA	NA	NA
WP_046335154.1\|830223_831225_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_004244589.1\|831221_832967_-	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	8.4e-61	30.9
WP_088206707.1\|833003_835373_-	DNA internalization-related competence protein ComEC/Rec2	Q0H255	Geobacillus_phage	3.6e-22	30.5
WP_004244587.1\|835804_836092_-	integration host factor subunit beta	A7KV42	Bacillus_phage	8.4e-11	40.0
WP_004244586.1\|836156_837830_-	30S ribosomal protein S1	NA	NA	NA	NA
WP_004244585.1\|838011_838689_-	(d)CMP kinase	NA	NA	NA	NA
WP_004252010.1\|838977_840264_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_004244582.1\|840460_841549_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	5.7e-84	47.0
WP_088206708.1\|841685_843092_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	1.1e-05	23.9
WP_088206709.1\|843228_844494_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_004244579.1\|844568_845606_-	L-asparaginase 2	NA	NA	NA	NA
WP_036971369.1\|845833_847591_+	30S ribosomal protein S12 methylthiotransferase accessory factor YcaO	NA	NA	NA	NA
WP_004244577.1\|848260_849115_+	formate transporter FocA	NA	NA	NA	NA
WP_004244576.1\|849169_851452_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-159	41.6
WP_004244575.1\|851559_852300_+	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.3e-20	27.0
WP_004244574.1\|852657_853563_+	hypothetical protein	NA	NA	NA	NA
WP_049236236.1\|853635_854685_-	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_004244572.1\|855085_855418_+	hypothetical protein	NA	NA	NA	NA
WP_004244571.1\|855597_856887_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.1e-97	46.2
WP_012367706.1\|857020_858370_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.8e-79	40.6
WP_004244569.1\|858380_858986_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_088206710.1\|859098_862932_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.7e-90	49.3
WP_004244566.1\|863059_863554_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_004252032.1\|864096_865056_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.4e-64	45.5
WP_088206711.1\|865197_866967_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	3.0e-21	23.5
WP_004244562.1\|866969_868721_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.4e-18	31.7
WP_004247616.1\|868722_869415_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_004244560.1\|869734_869953_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_004244559.1\|870071_872366_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.3e-170	42.9
WP_004244558.1\|872396_872711_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.5e-13	44.1

DBSCAN-SWA_5

1037873 : 1093293

Cronobacter_phage(20.93%)

bacteriocin,tail,integrase,tRNA,lysis,terminase

attL 1039579:1039597|attR 1093362:1093380

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012367653.1\|1037873_1039541_-\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	1.0e-286	85.0
1039579:1039597	attL	NA	NA	NA	NA
WP_088206732.1\|1039785_1040016_+	DNA polymerase III subunit theta	A0A1P8DTI0	Proteus_phage	9.1e-32	90.8
WP_046335368.1\|1040375_1040630_-	cloacin	NA	NA	NA	NA
WP_036969576.1\|1040847_1041105_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_088206733.1\|1041107_1043180_-	hypothetical protein	NA	NA	NA	NA
WP_049202079.1\|1043369_1043636_-	hypothetical protein	NA	NA	NA	NA
WP_088206734.1\|1043632_1044319_-	hypothetical protein	NA	NA	NA	NA
WP_017627865.1\|1044318_1044651_-	hypothetical protein	NA	NA	NA	NA
WP_046334564.1\|1048885_1049473_-\|tail	tail assembly protein	F1C572	Cronobacter_phage	2.9e-58	60.4
WP_088206735.1\|1049469_1050180_-	C40 family peptidase	F1C573	Cronobacter_phage	6.8e-86	65.5
WP_088206736.1\|1050176_1050920_-\|tail	phage minor tail protein L	K7PJS0	Enterobacterial_phage	6.5e-87	59.0
WP_004247516.1\|1050916_1051258_-\|tail	phage tail protein	I6PBN7	Cronobacter_phage	9.0e-28	50.0
WP_046334562.1\|1051401_1051602_+	hypothetical protein	NA	NA	NA	NA
WP_004245945.1\|1051621_1051912_-	hypothetical protein	NA	NA	NA	NA
WP_088206737.1\|1051923_1054854_-\|tail	phage tail tape measure protein	A0A0K0VLY2	Klebsiella_phage	1.8e-132	34.9
WP_088206738.1\|1054914_1055736_-	zinc ribbon domain-containing protein	I6PDJ9	Cronobacter_phage	3.6e-22	52.8
WP_088206739.1\|1055853_1057029_-	hypothetical protein	NA	NA	NA	NA
WP_088206740.1\|1057033_1058236_-	hypothetical protein	NA	NA	NA	NA
WP_088207262.1\|1058478_1059231_-	phage antirepressor protein	A0A2I7RX10	Vibrio_phage	8.4e-42	42.8
WP_088206741.1\|1059350_1059923_-	hypothetical protein	H6WRU8	Salmonella_phage	2.3e-28	53.1
WP_088206742.1\|1060250_1060964_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_080978927.1\|1061037_1061316_-	hypothetical protein	A0A2H4J4F7	uncultured_Caudovirales_phage	6.7e-13	49.3
WP_004245960.1\|1061342_1061648_-	hypothetical protein	I6PDG2	Cronobacter_phage	6.6e-22	55.4
WP_088206743.1\|1061699_1062356_-\|tail	phage tail protein	G8C7Q3	Escherichia_phage	1.9e-58	57.2
WP_088206744.1\|1062401_1062803_-	DUF4128 domain-containing protein	NA	NA	NA	NA
WP_088206745.1\|1062799_1063381_-	hypothetical protein	G8C7Q1	Escherichia_phage	6.7e-47	51.6
WP_088206746.1\|1063382_1063733_-	hypothetical protein	I6PD77	Cronobacter_phage	1.7e-21	45.1
WP_088206747.1\|1063735_1064215_-	hypothetical protein	G8C7P9	Escherichia_phage	2.1e-30	46.3
WP_115353767.1\|1064253_1064538_-	hypothetical protein	NA	NA	NA	NA
WP_088206748.1\|1064540_1065494_-	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	1.4e-126	71.9
WP_088206749.1\|1065507_1066281_-	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	7.7e-67	59.7
WP_129111976.1\|1066407_1066608_-	hypothetical protein	NA	NA	NA	NA
WP_088206751.1\|1066626_1067751_-	hypothetical protein	I6PD76	Cronobacter_phage	3.0e-104	51.0
WP_088206752.1\|1067747_1069118_-	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	3.7e-120	49.4
WP_088206753.1\|1069117_1070692_-\|terminase	terminase	G8C7P3	Escherichia_phage	2.3e-283	86.7
WP_046334543.1\|1070688_1071255_-\|terminase	terminase small subunit	G0ZND3	Cronobacter_phage	1.8e-57	64.1
WP_046334542.1\|1071280_1071550_+	hypothetical protein	NA	NA	NA	NA
WP_004245979.1\|1071761_1071968_-	hypothetical protein	NA	NA	NA	NA
WP_046334540.1\|1072893_1073355_-\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	2.8e-08	34.1
WP_088206754.1\|1073497_1073968_-	lysozyme	A0A1W6JNW4	Morganella_phage	2.6e-49	61.2
WP_046334538.1\|1073967_1074237_-	bacteriophage protein	A0A2H4FNF0	Salmonella_phage	2.7e-19	53.5
WP_046334537.1\|1074303_1074726_-	hypothetical protein	NA	NA	NA	NA
WP_046334536.1\|1074869_1075277_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_088206755.1\|1075925_1076138_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.4e-25	77.1
WP_063109079.1\|1076718_1077177_-	Hsp20 family protein	NA	NA	NA	NA
WP_004247487.1\|1077416_1078049_-	antitermination protein	I6PDF8	Cronobacter_phage	7.3e-23	34.3
WP_004245983.1\|1078048_1078405_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.2e-44	71.6
WP_004245984.1\|1078401_1078692_-	DUF1364 domain-containing protein	A0A2H4JIC4	uncultured_Caudovirales_phage	7.2e-34	68.1
WP_049195179.1\|1078770_1079220_-	hypothetical protein	A0A2H4FNF5	Salmonella_phage	2.9e-13	32.2
WP_088206756.1\|1079245_1080631_-	AAA family ATPase	Q716D2	Shigella_phage	1.8e-114	47.7
WP_088206757.1\|1080630_1081377_-	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	1.5e-22	33.6
WP_004247478.1\|1081642_1081990_-	hypothetical protein	A0A1W6JNY4	Morganella_phage	8.3e-37	72.9
WP_004247477.1\|1082135_1082345_-	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	1.2e-25	83.3
WP_004247476.1\|1082450_1083095_+	LexA family transcriptional regulator	A0A077KGZ5	Edwardsiella_phage	9.6e-79	64.5
WP_004245991.1\|1083103_1083445_+	DUF3024 domain-containing protein	A0A1W6JP12	Morganella_phage	2.1e-37	62.8
WP_060554529.1\|1083565_1083826_+	hypothetical protein	NA	NA	NA	NA
WP_060554528.1\|1083822_1084311_+	hypothetical protein	NA	NA	NA	NA
WP_088206758.1\|1084739_1085057_+	hypothetical protein	A0A1W6JNZ0	Morganella_phage	1.8e-17	50.5
WP_088206759.1\|1085065_1085281_+	hypothetical protein	NA	NA	NA	NA
WP_060554526.1\|1085277_1085493_-	hypothetical protein	NA	NA	NA	NA
WP_004247470.1\|1085678_1085831_+	hypothetical protein	NA	NA	NA	NA
WP_004247469.1\|1085827_1086013_-	hypothetical protein	NA	NA	NA	NA
WP_049206628.1\|1086176_1086452_+	hypothetical protein	NA	NA	NA	NA
WP_004247466.1\|1086574_1086802_+	hypothetical protein	NA	NA	NA	NA
WP_017628822.1\|1087053_1087308_+	hypothetical protein	NA	NA	NA	NA
WP_017628824.1\|1087453_1087774_+	hypothetical protein	NA	NA	NA	NA
WP_017628825.1\|1087775_1088660_+	ATP-binding protein	A0A1B1P9H8	Acinetobacter_phage	1.9e-61	52.0
WP_088206760.1\|1088649_1089189_+	single-stranded DNA-binding protein	C6ZR36	Salmonella_phage	8.1e-55	59.7
WP_088206762.1\|1089449_1089905_+	ASCH domain-containing protein	M1F3E2	Salmonella_phage	3.5e-11	25.4
WP_049199156.1\|1089967_1090222_+	hypothetical protein	NA	NA	NA	NA
WP_088206763.1\|1090292_1090547_+	hypothetical protein	A0A1P8DTI8	Proteus_phage	3.8e-23	64.3
WP_088206764.1\|1090539_1090785_+	hypothetical protein	NA	NA	NA	NA
WP_154599060.1\|1090943_1091105_+	hypothetical protein	A0A1P8DTF6	Proteus_phage	2.6e-25	100.0
WP_088206765.1\|1091097_1091466_+	hypothetical protein	NA	NA	NA	NA
WP_004246013.1\|1092089_1092335_+	excisionase	NA	NA	NA	NA
WP_026164649.1\|1092291_1093293_+\|integrase	tyrosine-type recombinase/integrase	Q9MCR4	Enterobacteria_phage	1.9e-70	44.3
1093362:1093380	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1129229 : 1140574

Mycobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088206769.1\|1129229_1130441_+	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	3.3e-104	48.8
WP_026090527.1\|1130639_1130903_+	YbeD family protein	NA	NA	NA	NA
WP_004246056.1\|1131254_1131899_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_004246057.1\|1132000_1132966_+	lipoyl synthase	NA	NA	NA	NA
WP_004246058.1\|1132981_1133356_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.7e-25	52.0
WP_004246068.1\|1133814_1134024_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	5.9e-22	74.2
WP_004246069.1\|1134221_1134695_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_004246071.1\|1134976_1135201_+	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.4e-13	47.9
WP_004246072.1\|1135212_1135617_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	3.7e-12	38.5
WP_088206770.1\|1135645_1137772_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	4.0e-206	51.5
WP_004247427.1\|1137797_1138766_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	3.5e-133	71.0
WP_004247426.1\|1139374_1140574_+	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	3.8e-28	37.6

DBSCAN-SWA_7

1238076 : 1292872

Bacillus_phage(33.33%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004244835.1\|1238076_1238796_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_004247375.1\|1239011_1240052_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_004244837.1\|1240082_1240355_+	oxidative damage protection protein	NA	NA	NA	NA
WP_004244838.1\|1240417_1241488_+	membrane-bound lytic murein transglycosylase MltC	A0A1P8CWQ1	Bacillus_phage	4.9e-11	38.1
WP_004247373.1\|1242160_1242409_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.9e-07	38.5
WP_036905867.1\|1242628_1242901_-\|transposase	transposase	NA	NA	NA	NA
WP_004252392.1\|1243127_1243397_-	hypothetical protein	NA	NA	NA	NA
WP_036919898.1\|1243400_1243979_-	hypothetical protein	NA	NA	NA	NA
WP_107034653.1\|1245103_1245211_+	DUF2618 domain-containing protein	NA	NA	NA	NA
WP_004252399.1\|1245584_1247747_+	ornithine decarboxylase SpeF	NA	NA	NA	NA
WP_088207263.1\|1247810_1249139_+	putrescine-ornithine antiporter	NA	NA	NA	NA
WP_088206777.1\|1249268_1249946_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_036919897.1\|1250213_1251473_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_088206778.1\|1251492_1253655_-	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	3.6e-29	31.8
WP_017827585.1\|1253679_1254933_-	transporter	NA	NA	NA	NA
WP_157677995.1\|1255037_1261235_-	RTX toxin	NA	NA	NA	NA
WP_088206779.1\|1261311_1261623_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004244871.1\|1262264_1263056_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004244872.1\|1263029_1263887_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004247356.1\|1264225_1265377_-	hypothetical protein	NA	NA	NA	NA
WP_088206780.1\|1265389_1265926_-	fimbrial protein	NA	NA	NA	NA
WP_004252417.1\|1265925_1266459_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_088206781.1\|1266451_1266880_-	fimbrial protein	NA	NA	NA	NA
WP_004247352.1\|1266911_1267643_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_088206782.1\|1267678_1270201_-	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_036919880.1\|1270261_1270834_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_004247349.1\|1271022_1271583_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_004247348.1\|1271732_1272017_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_088206783.1\|1272658_1273483_+	hypothetical protein	NA	NA	NA	NA
WP_036969813.1\|1273479_1273932_+	hypothetical protein	NA	NA	NA	NA
WP_088206784.1\|1274094_1275063_+	HTH-type transcriptional regulator TreR	NA	NA	NA	NA
WP_004247346.1\|1275181_1276603_+	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
WP_088206785.1\|1276628_1279346_+	glycoside hydrolase family 65 protein	NA	NA	NA	NA
WP_004252426.1\|1279338_1279983_+	beta-phosphoglucomutase	NA	NA	NA	NA
WP_004247343.1\|1280037_1281423_+	glycoporin	NA	NA	NA	NA
WP_004247342.1\|1281791_1283048_+	Zn-dependent hydrolase	NA	NA	NA	NA
WP_004244894.1\|1283041_1283926_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_088206786.1\|1284392_1286342_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_088206787.1\|1286647_1288612_+\|protease	metalloprotease	NA	NA	NA	NA
WP_088206788.1\|1288842_1290906_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_004244908.1\|1291396_1292872_+\|protease	serralysin family metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_8

2084452 : 2182885

Salmonella_phage(35.9%)

head,capsid,portal,tail,protease,plate,integrase,tRNA,holin,lysis,terminase

attL 2138051:2138098|attR 2169241:2169288

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088206898.1\|2084452_2085550_+\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	NA	NA	NA	NA
WP_004249699.1\|2085671_2086073_-	YijD family membrane protein	NA	NA	NA	NA
WP_004246383.1\|2086072_2086753_-	HTH-type transcriptional repressor FabR	NA	NA	NA	NA
WP_004246384.1\|2086953_2088351_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA
WP_004249700.1\|2088342_2089260_-	DNA-binding transcriptional regulator OxyR	NA	NA	NA	NA
WP_004246386.1\|2089497_2090880_-	argininosuccinate lyase	NA	NA	NA	NA
WP_004246387.1\|2090972_2092184_-	argininosuccinate synthase	NA	NA	NA	NA
WP_004246388.1\|2092248_2093022_-	acetylglutamate kinase	NA	NA	NA	NA
WP_088206899.1\|2093042_2094047_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_004249702.1\|2094147_2095311_+	acetylornithine deacetylase	NA	NA	NA	NA
WP_004246391.1\|2095402_2097127_-	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	6.2e-24	22.5
WP_004246392.1\|2097691_2098513_+	DUF3100 domain-containing protein	NA	NA	NA	NA
WP_004246394.1\|2098509_2098959_+	hypothetical protein	NA	NA	NA	NA
WP_004246396.1\|2098958_2100140_+	amidohydrolase	NA	NA	NA	NA
WP_004246397.1\|2100216_2101230_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004246398.1\|2101999_2103502_+	glycine betaine/L-proline transporter ProP	Q6JIH2	Burkholderia_virus	4.8e-57	32.2
WP_060555804.1\|2103512_2104943_+	deoxyribodipyrimidine photo-lyase	A0A1V0SGL1	Hokovirus	2.8e-62	33.4
WP_004249704.1\|2104982_2105966_+	glycosyltransferase	NA	NA	NA	NA
WP_004246402.1\|2106022_2108659_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_004246404.1\|2109131_2109293_-	hypothetical protein	NA	NA	NA	NA
WP_004246405.1\|2109371_2109890_-	TIGR00645 family protein	NA	NA	NA	NA
WP_088206900.1\|2110012_2112451_-	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA
WP_004249706.1\|2112460_2113621_-	cystathionine gamma-synthase	NA	NA	NA	NA
WP_004246409.1\|2113906_2114224_+	met regulon transcriptional regulator MetJ	NA	NA	NA	NA
WP_088206901.1\|2114296_2115601_-	type II toxin-antitoxin system HipA family toxin YjjJ	NA	NA	NA	NA
WP_004246411.1\|2115993_2116206_-	50S ribosomal protein L31	NA	NA	NA	NA
WP_004249709.1\|2116409_2118611_+	primosomal protein N'	NA	NA	NA	NA
WP_004249710.1\|2118863_2119895_+	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA
WP_004246415.1\|2119965_2120760_+	cell division protein FtsN	NA	NA	NA	NA
WP_004246416.1\|2120870_2121401_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_004246417.1\|2121413_2122754_+	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	8.7e-42	27.1
WP_004249712.1\|2122852_2123770_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_004246419.1\|2123878_2124397_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_012368679.1\|2124490_2124733_-	cell division protein ZapB	NA	NA	NA	NA
WP_004246421.1\|2125029_2125845_+	aquaporin	M1HJ75	Acanthocystis_turfacea_Chlorella_virus	2.9e-16	28.4
WP_004246422.1\|2125887_2127420_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_004246423.1\|2127529_2128714_-	multidrug efflux MFS transporter EmrD	S4TR35	Salmonella_phage	2.0e-13	24.2
WP_087740961.1\|2129052_2129799_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_012368677.1\|2129859_2130288_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_049217755.1\|2130399_2131035_+	YiiQ family protein	NA	NA	NA	NA
WP_088206902.1\|2131141_2131912_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_088206903.1\|2132007_2133012_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004246429.1\|2133305_2134283_-	6-phosphofructokinase	NA	NA	NA	NA
WP_036895948.1\|2134816_2135572_+	3-oxoacyl-ACP reductase FabG	NA	NA	NA	NA
WP_004249719.1\|2135690_2136839_+	glycosyltransferase	NA	NA	NA	NA
WP_088206904.1\|2136887_2137949_-	glycosyltransferase	NA	NA	NA	NA
2138051:2138098	attL	NA	NA	NA	NA
WP_088206905.1\|2138293_2138998_+	hypothetical protein	NA	NA	NA	NA
WP_088206906.1\|2139044_2139698_+	DCL family protein	NA	NA	NA	NA
WP_012368178.1\|2139751_2139970_-	positive regulator of phage late gene transcription	Q53ZE7	Salmonella_virus	1.7e-19	70.3
WP_088206907.1\|2140022_2141120_-	phage late control D family protein	E5G6Q3	Salmonella_phage	3.8e-112	55.1
WP_036907694.1\|2141119_2141584_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	3.3e-41	61.4
WP_088206908.1\|2141583_2144418_-\|tail	phage tail tape measure protein	A0A2H4JE61	uncultured_Caudovirales_phage	9.0e-113	41.4
WP_075204427.1\|2144410_2144584_-\|tail	GpE family phage tail protein	A0A2I8TV82	Erwinia_phage	1.6e-09	50.9
WP_088206909.1\|2144544_2144892_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	1.2e-19	55.4
WP_088206910.1\|2144911_2145427_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	4.5e-55	57.9
WP_088206911.1\|2145430_2146603_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	6.5e-166	70.9
WP_088206912.1\|2146698_2148330_-\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	1.8e-57	72.4
WP_036907674.1\|2148319_2148931_-\|tail	phage tail protein I	F1BUP2	Erwinia_phage	1.1e-76	69.4
WP_088206913.1\|2148923_2149832_-\|plate	baseplate assembly protein	A0A218M4K5	Erwinia_phage	1.3e-108	66.6
WP_071233987.1\|2149833_2150172_-\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	3.8e-26	50.5
WP_088206914.1\|2150168_2150795_-\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	2.0e-57	60.3
WP_088206915.1\|2150860_2151496_-	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	7.6e-28	35.8
WP_088206916.1\|2151485_2151923_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.2e-33	49.3
WP_088206917.1\|2151897_2152401_-\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	1.9e-05	30.1
WP_088206918.1\|2152397_2152802_-	M15 family metallopeptidase	K4F776	Cronobacter_phage	7.9e-39	57.4
WP_012368194.1\|2152794_2153109_-\|holin	holin	NA	NA	NA	NA
WP_088206919.1\|2153128_2153335_-\|tail	phage tail protein	K4PAW7	Burkholderia_phage	8.1e-16	52.9
WP_049220085.1\|2153334_2153790_-\|head	head completion/stabilization protein	E5E3S2	Burkholderia_phage	2.4e-28	45.3
WP_088206920.1\|2153867_2154536_-	hypothetical protein	F1BUQ7	Erwinia_phage	2.1e-44	46.2
WP_088206921.1\|2154535_2155681_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	8.9e-128	67.4
WP_012368199.1\|2155696_2156506_-\|capsid	GPO family capsid scaffolding protein	F1BUR1	Erwinia_phage	8.9e-66	49.1
WP_088206922.1\|2156678_2158433_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	8.8e-260	73.2
WP_088206923.1\|2158432_2159461_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	5.5e-137	68.2
WP_088206925.1\|2159872_2160337_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_088206926.1\|2160371_2161013_-	hypothetical protein	NA	NA	NA	NA
WP_088206927.1\|2161017_2162016_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_088206928.1\|2164660_2164984_-	DUF5405 family protein	NA	NA	NA	NA
WP_088206929.1\|2164983_2165811_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	F1BUN1	Cronobacter_phage	5.2e-61	47.8
WP_088206930.1\|2165812_2166034_-	TraR/DksA family transcriptional regulator	F1BUS2	Erwinia_phage	2.6e-12	50.7
WP_012368209.1\|2166026_2166284_-	DUF2732 family protein	NA	NA	NA	NA
WP_049220105.1\|2166301_2166697_-	hypothetical protein	NA	NA	NA	NA
WP_036908537.1\|2166746_2167022_-	hypothetical protein	NA	NA	NA	NA
WP_152964418.1\|2167031_2167184_-	hypothetical protein	NA	NA	NA	NA
WP_049220106.1\|2167180_2167369_-	hypothetical protein	NA	NA	NA	NA
WP_036908542.1\|2167370_2167661_-	hypothetical protein	A0A0M4RCW1	Salmonella_phage	1.1e-31	63.5
WP_036908544.1\|2167765_2168071_+	helix-turn-helix transcriptional regulator	A0A0M5M1I9	Salmonella_phage	8.4e-17	49.5
WP_036908546.1\|2168137_2169109_+\|integrase	tyrosine-type recombinase/integrase	A0A0M4RTQ0	Salmonella_phage	1.6e-117	64.4
WP_004249721.1\|2169385_2169952_-	periplasmic heavy metal sensor	NA	NA	NA	NA
2169241:2169288	attR	NA	NA	NA	NA
WP_004246432.1\|2170135_2170834_+	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	8.1e-07	31.1
WP_004246433.1\|2170846_2172235_+	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	4.4e-20	27.3
WP_088206931.1\|2173477_2174236_+	DUF707 domain-containing protein	NA	NA	NA	NA
WP_157677997.1\|2174732_2176145_+	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_088206933.1\|2176148_2177324_+	hypothetical protein	NA	NA	NA	NA
WP_088206934.1\|2177331_2178381_+	glycosyltransferase	NA	NA	NA	NA
WP_088206935.1\|2178383_2179190_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_088206936.1\|2179261_2180020_+	glycosyltransferase	A0A1V0SAG8	Catovirus	2.0e-06	28.6
WP_088206937.1\|2180022_2180970_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_049213610.1\|2181203_2182370_+	nucleotide sugar dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	5.0e-118	56.9
WP_004246449.1\|2182381_2182885_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA

DBSCAN-SWA_9

2728249 : 2786044

Cronobacter_phage(60.61%)

head,portal,tail,holin,integrase,tRNA,capsid,terminase

attL 2737664:2737681|attR 2780446:2780463

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004245894.1\|2728249_2729284_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_004245893.1\|2729716_2730781_+	hypothetical protein	NA	NA	NA	NA
WP_004245892.1\|2730943_2732281_+	S8 family serine peptidase	Q2A0D0	Sodalis_phage	1.3e-29	29.6
WP_004245891.1\|2732724_2733840_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	G3M9Y6	Bacillus_virus	5.8e-31	36.4
WP_004250112.1\|2733823_2734684_+	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	5.7e-10	25.7
WP_004245888.1\|2734680_2735460_+	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
WP_004245887.1\|2735576_2736620_+	spermidine/putrescine ABC transporter substrate-binding protein PotD	NA	NA	NA	NA
WP_004245886.1\|2736752_2737070_-	helix-turn-helix transcriptional regulator	A0A1W6JNW5	Morganella_phage	2.5e-08	51.6
WP_004250113.1\|2737096_2738170_-	type 1 fimbrial protein	NA	NA	NA	NA
2737664:2737681	attL	NA	NA	NA	NA
WP_036895723.1\|2738169_2738688_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_088206997.1\|2740157_2741189_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	2.4e-124	62.7
WP_036907222.1\|2741193_2741616_-	hypothetical protein	NA	NA	NA	NA
WP_052124619.1\|2741630_2742221_-	phage repressor protein CI	F1BUN8	Cronobacter_phage	1.6e-27	34.3
WP_036907225.1\|2742370_2742595_+	hypothetical protein	NA	NA	NA	NA
WP_088206998.1\|2742624_2743134_+	hypothetical protein	E5G6L3	Salmonella_phage	1.7e-38	50.3
WP_088206999.1\|2743298_2743646_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	2.5e-17	41.8
WP_036907235.1\|2743722_2743974_+	DUF2732 family protein	NA	NA	NA	NA
WP_088207000.1\|2743975_2746168_+	replication endonuclease	F1BUS0	Erwinia_phage	1.4e-206	56.4
WP_036907243.1\|2746486_2746669_+	hypothetical protein	NA	NA	NA	NA
WP_036907246.1\|2746670_2746979_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	2.1e-28	60.4
WP_088207266.1\|2746975_2747947_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	1.5e-128	66.8
WP_036907251.1\|2748009_2749797_-\|terminase	terminase	F1BUM5	Cronobacter_phage	2.6e-227	65.8
WP_071233403.1\|2749958_2750795_+\|capsid	phage capsid protein	F1BUM4	Cronobacter_phage	9.6e-47	41.3
WP_036907256.1\|2750805_2751837_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	1.7e-130	69.9
WP_049212293.1\|2751842_2752547_+\|terminase	terminase	F1BUM0	Cronobacter_phage	1.3e-65	54.3
WP_036907264.1\|2752881_2753334_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	2.4e-36	53.3
WP_088207002.1\|2753330_2753807_+\|tail	phage tail protein	Q1I0Z6	Pasteurella_virus	1.0e-08	25.3
WP_071233401.1\|2753803_2754502_+	hypothetical protein	F1BUL6	Cronobacter_phage	1.5e-64	59.7
WP_071233400.1\|2754516_2755635_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	1.8e-133	64.9
WP_036907273.1\|2755634_2756087_+	DUF2597 family protein	F1BUL4	Cronobacter_phage	1.2e-48	62.6
WP_036907276.1\|2756101_2756395_+\|holin	holin	S4TP56	Salmonella_phage	1.1e-16	51.2
WP_071233399.1\|2756391_2756817_+	structural protein	A0A0A0RQM4	Escherichia_phage	1.9e-27	48.9
WP_071233398.1\|2756813_2757188_+	hypothetical protein	F1BUL2	Cronobacter_phage	1.3e-22	53.2
WP_036907284.1\|2757296_2757566_+	phage gene	A5X9I7	Aeromonas_virus	1.3e-16	49.4
WP_088207003.1\|2757753_2760270_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	5.2e-128	44.5
WP_049219617.1\|2760280_2760616_+	DUF2590 family protein	F1BUK8	Cronobacter_phage	7.0e-33	69.0
WP_071233396.1\|2760605_2761790_+	hypothetical protein	F1BUK6	Cronobacter_phage	1.2e-151	66.1
WP_049212312.1\|2761782_2762340_+	protein phage	F1BUK5	Cronobacter_phage	2.8e-66	64.1
WP_088207004.1\|2762343_2764296_+	hypothetical protein	F1BUK3	Cronobacter_phage	2.4e-109	61.0
WP_088207005.1\|2764299_2765022_+	hypothetical protein	F1BUK1	Cronobacter_phage	1.2e-34	32.2
WP_088207006.1\|2764993_2765578_+	hypothetical protein	F1BUJ9	Cronobacter_phage	1.1e-41	51.6
WP_088207007.1\|2765581_2767228_+	hypothetical protein	F1BUJ7	Cronobacter_phage	2.7e-146	52.7
WP_071233392.1\|2767239_2767458_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_071233391.1\|2767450_2767654_-	hypothetical protein	NA	NA	NA	NA
WP_088207008.1\|2768587_2769820_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_004245879.1\|2769856_2770534_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_004245878.1\|2770632_2771193_-	fimbrial protein	NA	NA	NA	NA
WP_004245877.1\|2772062_2772998_+	drug/metabolite DMT transporter permease	NA	NA	NA	NA
WP_004250120.1\|2773186_2774461_+	bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	A0A0B5JD48	Pandoravirus	2.0e-19	28.4
WP_004245875.1\|2774891_2775485_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_017827350.1\|2775505_2776366_+	winged helix family transcriptional regulator	NA	NA	NA	NA
WP_004245872.1\|2776365_2776884_+	hypothetical protein	NA	NA	NA	NA
WP_004249182.1\|2777467_2777746_+	BMC domain-containing protein	NA	NA	NA	NA
WP_004245870.1\|2777766_2778051_+	BMC domain-containing protein	NA	NA	NA	NA
WP_004245869.1\|2778065_2778344_+	BMC domain-containing protein	NA	NA	NA	NA
WP_004249183.1\|2778411_2780064_+	acetaldehyde dehydrogenase (acetylating)	NA	NA	NA	NA
WP_004245867.1\|2780090_2780354_+	EutN/CcmL family microcompartment protein	NA	NA	NA	NA
WP_004245865.1\|2780361_2781510_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
2780446:2780463	attR	NA	NA	NA	NA
WP_088207009.1\|2781561_2784990_+\|holin	choline trimethylamine-lyase	NA	NA	NA	NA
WP_004245863.1\|2785093_2786044_+\|holin	choline TMA-lyase-activating enzyme	NA	NA	NA	NA

DBSCAN-SWA_10

3075837 : 3084687

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012368339.1\|3075837_3076983_-	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	3.5e-31	26.9
WP_004250201.1\|3077375_3077960_+	tellurium resistance-associated protein TerZ	K4JRX3	Caulobacter_phage	4.2e-17	30.2
WP_088207047.1\|3077960_3079103_+	tellurium resistance protein TerA	NA	NA	NA	NA
WP_004245607.1\|3079127_3079583_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_004249445.1\|3079617_3080643_+	TerC/Alx family metal homeostasis membrane protein	K7QKE8	Escherichia_phage	1.3e-74	47.9
WP_004249446.1\|3080710_3081289_+	tellurium resistance membrane protein TerD	K4JRX3	Caulobacter_phage	2.4e-33	41.5
WP_004245603.1\|3081365_3081941_+	TerD family protein	K4JRX3	Caulobacter_phage	1.2e-27	40.3
WP_004245602.1\|3082037_3082718_-	HAD-IB family hydrolase	NA	NA	NA	NA
WP_004245601.1\|3083118_3084687_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.2e-11	33.7

DBSCAN-SWA_11

3318449 : 3389073

Proteus_phage(20.0%)

head,capsid,portal,tail,protease,integrase,tRNA,holin,transposase,lysis,terminase

attL 3345807:3345830|attR 3389099:3389122

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088207071.1\|3318449_3319658_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	6.8e-187	80.8
WP_004244272.1\|3319873_3321538_+	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
WP_004248647.1\|3321661_3322141_-\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA	NA	NA	NA
WP_088207072.1\|3322188_3322998_-	polysaccharide biosynthesis protein GumN	NA	NA	NA	NA
WP_088207073.1\|3323123_3324653_-	adhesin	NA	NA	NA	NA
WP_088207074.1\|3324988_3327943_-	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	1.5e-115	36.5
WP_004244266.1\|3328077_3328479_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_004250295.1\|3328444_3328966_-	NfeD family protein	NA	NA	NA	NA
WP_004244263.1\|3328968_3329892_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_004244262.1\|3329931_3330789_-	co-chaperone YbbN	NA	NA	NA	NA
WP_060555668.1\|3330874_3331660_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.9e-05	25.4
WP_036907491.1\|3331710_3332340_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_004250296.1\|3332310_3332997_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.6e-31	33.9
WP_060555667.1\|3332993_3335435_+	ABC transporter permease	NA	NA	NA	NA
WP_004244256.1\|3335534_3336560_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_004250299.1\|3336637_3337906_-	MFS transporter	NA	NA	NA	NA
WP_088207075.1\|3338029_3339097_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_004248640.1\|3339093_3339615_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_004244250.1\|3339747_3340470_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_004244249.1\|3340482_3340977_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_004244247.1\|3341368_3342760_+\|tRNA	cysteine--tRNA ligase	A0A2K9L6B7	Tupanvirus	2.7e-38	32.3
WP_004248638.1\|3342825_3343767_-	1-phosphofructokinase	NA	NA	NA	NA
WP_004244244.1\|3344403_3344616_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004248636.1\|3344619_3345492_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	7.4e-34	36.8
3345807:3345830	attL	NA	NA	NA	NA
WP_088207076.1\|3345835_3346024_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_088207078.1\|3346254_3346788_-	hypothetical protein	A0A088C4R7	Shewanella_sp._phage	3.7e-20	34.8
WP_088207079.1\|3346787_3347540_-	ORF6N domain-containing protein	A0A1B5FPC0	Escherichia_phage	9.4e-86	61.7
WP_088207080.1\|3347549_3348035_-	hypothetical protein	NA	NA	NA	NA
WP_088207267.1\|3348031_3348241_-	hypothetical protein	NA	NA	NA	NA
WP_088207081.1\|3348224_3348578_-	hypothetical protein	NA	NA	NA	NA
WP_088207082.1\|3348652_3349075_-	hypothetical protein	NA	NA	NA	NA
WP_088207083.1\|3349118_3349370_-	hypothetical protein	NA	NA	NA	NA
WP_088207084.1\|3349369_3349771_-	hypothetical protein	NA	NA	NA	NA
WP_088207086.1\|3350128_3350335_-	hypothetical protein	NA	NA	NA	NA
WP_071425828.1\|3350711_3351761_-	serine/threonine protein kinase	G9L673	Escherichia_phage	2.4e-111	57.3
WP_088207087.1\|3351757_3352216_-	hypothetical protein	G9L674	Escherichia_phage	1.2e-51	69.1
WP_088207088.1\|3352320_3352662_-	DUF3024 domain-containing protein	A0A1W6JP12	Morganella_phage	5.6e-38	63.7
WP_075673927.1\|3352670_3353315_-	LexA family transcriptional regulator	A0A1P8DTH0	Proteus_phage	2.4e-77	70.8
WP_088207089.1\|3353419_3353692_+	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	1.4e-18	67.7
WP_083629123.1\|3353684_3353933_+	hypothetical protein	A0A286S2B5	Klebsiella_phage	4.0e-17	56.0
WP_088207090.1\|3354189_3355755_+	helicase	A0A286N2P9	Klebsiella_phage	2.2e-217	68.3
WP_088207091.1\|3355751_3356726_+	DNA primase	A0A286N2Q0	Klebsiella_phage	1.0e-103	54.5
WP_075673909.1\|3356725_3357109_+	antitermination protein	A0A088CD47	Shigella_phage	4.2e-50	72.2
WP_036934641.1\|3357349_3358516_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	A0A218MNE0	uncultured_virus	8.6e-86	43.6
WP_036934638.1\|3359158_3359476_+\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	1.3e-31	61.0
WP_036934635.1\|3359468_3359888_+	structural protein	A0A2R3UAM8	Myoviridae_environmental_samples	5.7e-24	45.4
WP_036934633.1\|3360087_3360666_+	antirepressor	A0A0H4IQ87	Shigella_phage	1.9e-70	67.7
WP_081355115.1\|3360736_3361111_+\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	1.1e-13	40.2
WP_036934630.1\|3362104_3362608_+	hypothetical protein	A0A1P8DTD7	Proteus_phage	2.2e-22	52.7
WP_088207092.1\|3362611_3362950_+	HNH endonuclease	F1C587	Cronobacter_phage	2.9e-42	69.7
WP_006537822.1\|3363067_3363535_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	9.5e-44	59.7
WP_088207093.1\|3363488_3365231_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	5.0e-146	46.1
WP_072071165.1\|3365231_3366554_+\|portal	phage portal protein	A0A1P8DTI5	Proteus_phage	9.1e-201	77.0
WP_072071164.1\|3366559_3367411_+\|protease	Clp protease ClpP	A0A1P8DTI2	Proteus_phage	3.5e-129	84.3
WP_072071163.1\|3367422_3368637_+\|capsid	phage major capsid protein	A0A1P8DTJ7	Proteus_phage	1.9e-200	89.4
WP_072071162.1\|3368682_3368877_+	hypothetical protein	A0A1P8DTJ1	Proteus_phage	2.0e-11	73.5
WP_058336093.1\|3368876_3369203_+\|head,tail	phage gp6-like head-tail connector protein	A0A1P8DTJ4	Proteus_phage	5.8e-40	75.0
WP_072071161.1\|3369211_3369541_+\|head	phage head closure protein	B5WZS5	Pseudomonas_phage	3.3e-11	37.8
WP_072062637.1\|3369530_3370004_+	hypothetical protein	A0A0R6PHU8	Moraxella_phage	1.1e-10	30.5
WP_088207094.1\|3370009_3370351_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_072071178.1\|3370360_3371026_+	hypothetical protein	NA	NA	NA	NA
WP_036900961.1\|3371089_3371506_+	hypothetical protein	NA	NA	NA	NA
WP_072071177.1\|3371502_3371781_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_072071176.1\|3371821_3375109_+\|tail	phage tail tape measure protein	Q8W6T6	Burkholderia_virus	9.6e-50	40.2
WP_088207095.1\|3375109_3375706_+	hypothetical protein	S4TSP7	Salmonella_phage	1.6e-51	53.3
WP_004251702.1\|3375705_3376287_+	hypothetical protein	Q7Y3Z7	Yersinia_phage	4.0e-52	50.0
WP_088207096.1\|3376304_3376856_+	outer membrane beta-barrel protein	A0A1B0VBR9	Salmonella_phage	1.4e-30	43.8
WP_088207097.1\|3376924_3377323_+	hypothetical protein	A0A059VK01	Pseudomonas_phage	3.2e-32	47.7
WP_088207098.1\|3377322_3380505_+	DUF1983 domain-containing protein	Q7Y3Z3	Yersinia_phage	3.9e-197	50.8
WP_088207099.1\|3380508_3381510_+	hypothetical protein	NA	NA	NA	NA
WP_036919964.1\|3381532_3381838_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_020946065.1\|3381938_3383021_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_088207100.1\|3383030_3385565_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_041701675.1\|3385574_3386300_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_088207101.1\|3386365_3386911_-	uroepithelial cell adherence major pilin UcaA	NA	NA	NA	NA
WP_036935173.1\|3387846_3389073_-\|integrase	site-specific integrase	A0A248SL35	Klebsiella_phage	3.3e-35	29.9
3389099:3389122	attR	NA	NA	NA	NA

DBSCAN-SWA_12

3670581 : 3721854

Burkholderia_phage(23.08%)

head,integrase,tRNA,holin,lysis,terminase

attL 3681563:3681579|attR 3723288:3723304

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004243900.1\|3670581_3671340_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_088207131.1\|3671640_3672219_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_004243897.1\|3672220_3672880_+	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_004243896.1\|3672928_3673900_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_004243895.1\|3673912_3674377_+	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_004243894.1\|3674697_3676494_+	elongation factor 4	A0A2K9L2P9	Tupanvirus	2.7e-22	41.2
WP_004248458.1\|3676508_3677480_+	signal peptidase I	NA	NA	NA	NA
WP_004248457.1\|3677675_3678356_+	ribonuclease III	A0A0P0BX11	Ostreococcus_lucimarinus_virus	8.1e-20	31.9
WP_004243892.1\|3678352_3679261_+	GTPase Era	NA	NA	NA	NA
WP_004248456.1\|3679273_3680014_+	DNA repair protein RecO	NA	NA	NA	NA
WP_017827085.1\|3680083_3680815_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_017827086.1\|3680814_3681195_+	holo-ACP synthase	NA	NA	NA	NA
WP_004250506.1\|3681224_3681485_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	2.7e-16	48.8
3681563:3681579	attL	NA	NA	NA	NA
WP_004250508.1\|3681701_3683102_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_004250509.1\|3683098_3683374_-	hypothetical protein	NA	NA	NA	NA
WP_036895412.1\|3683987_3684167_-	hypothetical protein	NA	NA	NA	NA
WP_036895410.1\|3684214_3684715_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	1.6e-41	56.4
WP_049211156.1\|3684714_3686682_-	hypothetical protein	H9C157	Pectobacterium_phage	5.8e-119	39.6
WP_004250523.1\|3686694_3686955_-	hypothetical protein	A0A1B1W282	Salmonella_phage	7.9e-08	45.3
WP_088207132.1\|3686954_3687287_-	hypothetical protein	H9C158	Pectobacterium_phage	6.1e-05	37.1
WP_088207133.1\|3687767_3688460_-	helix-turn-helix transcriptional regulator	G8C7L8	Escherichia_phage	3.1e-51	48.8
WP_049219173.1\|3688566_3688812_+	Cro/Cl family transcriptional regulator	NA	NA	NA	NA
WP_036895397.1\|3688860_3689316_+\|tRNA	tRNA-(guanine-N1)-methyltransferase	H9C162	Pectobacterium_phage	5.8e-30	55.4
WP_004250533.1\|3689333_3689558_+	hypothetical protein	H9C163	Pectobacterium_phage	9.5e-18	55.4
WP_088207134.1\|3689559_3690411_+	helix-turn-helix domain-containing protein	Q8W642	Enterobacteria_phage	1.4e-32	55.3
WP_036895392.1\|3690403_3690997_+	AAA family ATPase	K7PLU3	Enterobacteria_phage	1.1e-44	47.6
WP_101495146.1\|3690986_3692363_+	replicative DNA helicase	A0A192Y673	Salmonella_phage	1.9e-100	45.4
WP_036908161.1\|3692556_3693225_+	hypothetical protein	NA	NA	NA	NA
WP_088207135.1\|3693238_3694450_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_004250549.1\|3694524_3695118_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	1.5e-57	54.7
WP_071425521.1\|3695129_3695441_+	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	1.0e-33	68.8
WP_088207136.1\|3695475_3696024_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	6.3e-31	44.9
WP_020945472.1\|3696151_3696472_+	hypothetical protein	NA	NA	NA	NA
WP_046335182.1\|3696606_3696804_+	hypothetical protein	Q9MC00	Enterobacteria_phage	9.2e-09	63.5
WP_088207269.1\|3696958_3697996_+	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	7.5e-142	71.7
WP_049221519.1\|3698263_3698611_+\|holin	holin	NA	NA	NA	NA
WP_088207137.1\|3698603_3699008_+	structural protein	A0A2I7RXE2	Vibrio_phage	8.5e-25	50.0
WP_088207138.1\|3699004_3699442_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	6.6e-23	45.7
WP_088207139.1\|3699438_3699915_-	hypothetical protein	NA	NA	NA	NA
WP_088207140.1\|3699904_3700402_-	hypothetical protein	NA	NA	NA	NA
WP_088207141.1\|3700444_3700828_-	hypothetical protein	NA	NA	NA	NA
WP_088207142.1\|3701217_3702237_+\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	8.4e-37	34.9
WP_088207143.1\|3702435_3703833_+\|terminase	phage terminase large subunit	A0A2K9V3I6	Faecalibacterium_phage	4.8e-83	40.0
WP_088206688.1\|3703836_3705339_+	DUF1073 domain-containing protein	A0A2H4P6S9	Pseudomonas_phage	6.0e-100	42.0
WP_036896149.1\|3705376_3706090_+\|head	head protein	A0A2H5BG15	Pseudoalteromonas_phage	1.1e-32	34.7
WP_088207144.1\|3706086_3707346_+	DUF2213 domain-containing protein	Q6IWU4	Burkholderia_phage	1.2e-45	51.3
WP_036908136.1\|3707345_3707843_+	hypothetical protein	NA	NA	NA	NA
WP_087740818.1\|3707842_3708910_+	DUF2184 domain-containing protein	A0A088C493	Shewanella_sp._phage	8.8e-53	39.3
WP_060556539.1\|3708979_3709321_+	hypothetical protein	Q6IWU7	Burkholderia_phage	1.2e-08	35.5
WP_080047799.1\|3709323_3709755_+	DUF4054 domain-containing protein	Q6IWU8	Burkholderia_phage	3.3e-11	32.4
WP_004250581.1\|3709754_3710213_+	hypothetical protein	Q6IWU9	Burkholderia_phage	3.2e-12	37.6
WP_004250582.1\|3710212_3710584_+	hypothetical protein	NA	NA	NA	NA
WP_060557411.1\|3710570_3711086_+	hypothetical protein	NA	NA	NA	NA
WP_088206684.1\|3711094_3712582_+	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	6.6e-83	37.9
WP_004250586.1\|3712592_3713045_+	hypothetical protein	I7ATP4	Escherichia_phage	5.8e-22	38.1
WP_004250588.1\|3713085_3713544_+	hypothetical protein	Q6IWV4	Burkholderia_phage	6.7e-26	48.5
WP_087740816.1\|3713627_3715979_+	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	2.6e-17	28.8
WP_087740815.1\|3715980_3716508_+	hypothetical protein	NA	NA	NA	NA
WP_020945489.1\|3716507_3716825_+	hypothetical protein	Q6IWP9	Burkholderia_phage	3.3e-08	32.3
WP_087740814.1\|3716790_3717606_+	hypothetical protein	A1Z005	Burkholderia_virus	1.1e-10	26.3
WP_036908120.1\|3717608_3718301_+	hypothetical protein	A1Z003	Burkholderia_virus	9.1e-35	39.4
WP_004250600.1\|3718297_3718642_+	hypothetical protein	NA	NA	NA	NA
WP_087740813.1\|3718634_3719822_+	hypothetical protein	Q6IWQ3	Burkholderia_phage	1.1e-69	40.3
WP_004250603.1\|3719818_3720475_+	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	7.5e-39	40.3
WP_087740812.1\|3720480_3721854_+	hypothetical protein	Q6IWQ6	Burkholderia_phage	2.2e-16	38.0
3723288:3723304	attR	NA	NA	NA	NA

DBSCAN-SWA_13

3799324 : 3873678

Salmonella_phage(25.58%)

head,portal,tail,integrase,protease,tRNA,capsid,transposase,lysis,terminase

attL 3793432:3793448|attR 3840806:3840822

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3793432:3793448	attL	NA	NA	NA	NA
WP_004247117.1\|3799324_3800428_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004247118.1\|3800532_3800985_-	NUDIX hydrolase	NA	NA	NA	NA
WP_004247119.1\|3800977_3801607_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004247120.1\|3801745_3802999_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-21	92.6
WP_004251675.1\|3803119_3804247_-\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	3.7e-126	60.6
WP_004251672.1\|3804227_3804470_-	excisionase	NA	NA	NA	NA
WP_004247124.1\|3804531_3805062_-	hypothetical protein	A0A1W6JP41	Morganella_phage	5.7e-53	58.6
WP_004247125.1\|3805118_3805946_-	YfdQ family protein	A0A2R2Z323	Escherichia_phage	5.5e-79	56.6
WP_088207155.1\|3806011_3806386_-	hypothetical protein	Q8HAA1	Salmonella_phage	3.2e-42	71.4
WP_049255036.1\|3806593_3806797_-	hypothetical protein	NA	NA	NA	NA
WP_036900926.1\|3807049_3807793_-	restriction endonuclease	NA	NA	NA	NA
WP_036900929.1\|3807779_3808715_-	hypothetical protein	NA	NA	NA	NA
WP_049213205.1\|3808796_3809471_-	helix-turn-helix transcriptional regulator	A0A1W6JNY2	Morganella_phage	1.1e-88	75.6
WP_036900931.1\|3809566_3809794_+	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.8e-11	50.0
WP_004251663.1\|3809832_3810495_+	hypothetical protein	NA	NA	NA	NA
WP_004251662.1\|3810510_3810969_+	hypothetical protein	A0A1W6JP72	Morganella_phage	6.9e-31	48.2
WP_004251656.1\|3811224_3811404_+	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	1.8e-11	55.2
WP_004251644.1\|3811416_3812508_+	hypothetical protein	H2DE83	Erwinia_phage	5.3e-29	54.4
WP_004247134.1\|3812676_3813384_+	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	5.6e-56	51.7
WP_088207156.1\|3813383_3814409_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	3.7e-85	47.7
WP_049211559.1\|3814436_3815117_+	hypothetical protein	A0A1W6JP37	Morganella_phage	3.6e-52	50.0
WP_126656782.1\|3815293_3815473_+	hypothetical protein	NA	NA	NA	NA
WP_004251614.1\|3815987_3816410_+	hypothetical protein	NA	NA	NA	NA
WP_004251611.1\|3816462_3816732_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	6.7e-18	52.3
WP_088207157.1\|3816731_3817202_+	lysozyme	A0A1W6JNW4	Morganella_phage	7.5e-49	59.9
WP_004250565.1\|3817344_3817806_+\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	8.5e-13	34.0
WP_088207158.1\|3818454_3818967_+	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	8.2e-57	60.6
WP_049212505.1\|3819049_3819334_+	hypothetical protein	NA	NA	NA	NA
WP_088207159.1\|3819377_3819728_+	HNH endonuclease	A0A1P8DTD1	Proteus_phage	3.9e-58	92.0
WP_049212502.1\|3819724_3820126_+	hypothetical protein	NA	NA	NA	NA
WP_088207160.1\|3820312_3820807_+\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	9.9e-68	74.4
WP_088207161.1\|3820803_3822534_+\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	2.3e-292	81.6
WP_049212495.1\|3822543_3822723_+	hypothetical protein	S5FXQ9	Shigella_phage	1.7e-09	54.7
WP_049212492.1\|3822722_3823952_+\|portal	phage portal protein	Q8HAD4	Salmonella_phage	1.9e-176	72.7
WP_088207162.1\|3823923_3824574_+\|head,protease	HK97 family phage prohead protease	Q8HAD3	Salmonella_phage	4.8e-94	79.1
WP_088207163.1\|3824587_3825796_+\|capsid	phage major capsid protein	A0A1B5FPI9	Escherichia_phage	6.2e-156	69.8
WP_049212482.1\|3825877_3826186_+\|head,tail	phage gp6-like head-tail connector protein	A0A1B5FP86	Escherichia_phage	4.8e-12	40.2
WP_088207164.1\|3826182_3826512_+\|head	phage head closure protein	A0A0R6PHN1	Moraxella_phage	7.9e-05	30.9
WP_088207165.1\|3826501_3826975_+	hypothetical protein	A0A0R6PHU8	Moraxella_phage	8.7e-13	32.1
WP_088207166.1\|3826980_3827322_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_004251580.1\|3827331_3827997_+	hypothetical protein	NA	NA	NA	NA
WP_088207167.1\|3828061_3828478_+	hypothetical protein	NA	NA	NA	NA
WP_058336097.1\|3828474_3828750_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_088207168.1\|3828790_3832078_+\|tail	phage tail tape measure protein	B7SE05	Pseudomonas_virus	5.4e-53	47.0
WP_088207169.1\|3832078_3832675_+	hypothetical protein	S4TSP7	Salmonella_phage	9.2e-52	52.8
WP_049206482.1\|3832674_3833256_+	hypothetical protein	Q7Y3Z7	Yersinia_phage	5.3e-52	49.5
WP_049206484.1\|3833274_3833823_+	outer membrane beta-barrel protein	A0A1B0VBR9	Salmonella_phage	5.2e-25	38.4
WP_088207170.1\|3833891_3834290_+	hypothetical protein	A0A059VK01	Pseudomonas_phage	2.4e-32	46.2
WP_017627865.1\|3837965_3838298_+	hypothetical protein	NA	NA	NA	NA
WP_017627864.1\|3838297_3838984_+	hypothetical protein	NA	NA	NA	NA
WP_049202079.1\|3838980_3839247_+	hypothetical protein	NA	NA	NA	NA
WP_004247524.1\|3839263_3839524_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	1.9e-17	57.4
WP_036905765.1\|3840227_3840533_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_157673314.1\|3841622_3842903_+	DUF560 domain-containing protein	NA	NA	NA	NA
3840806:3840822	attR	NA	NA	NA	NA
WP_004247902.1\|3844419_3844584_+	isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-22	92.6
WP_157677999.1\|3844978_3845116_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	7.8e-15	81.4
WP_088207171.1\|3845290_3846004_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_036969579.1\|3847066_3847225_-\|transposase	transposase	NA	NA	NA	NA
WP_088207172.1\|3847543_3848749_+	hypothetical protein	NA	NA	NA	NA
WP_088207173.1\|3849007_3850213_+	hypothetical protein	NA	NA	NA	NA
WP_004247906.1\|3851497_3852622_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_004247907.1\|3853061_3853274_+	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	2.0e-25	78.6
WP_004242516.1\|3853605_3854064_+	Hsp20 family protein	NA	NA	NA	NA
WP_004242517.1\|3854554_3855016_+	hypothetical protein	NA	NA	NA	NA
WP_004247909.1\|3855138_3855513_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004242519.1\|3855602_3856451_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_004242521.1\|3856691_3856889_+	hypothetical protein	NA	NA	NA	NA
WP_004251489.1\|3856912_3857455_-	hypothetical protein	NA	NA	NA	NA
WP_026090443.1\|3858295_3858610_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012367820.1\|3858985_3859246_-	hypothetical protein	NA	NA	NA	NA
WP_004247912.1\|3859254_3859896_-	ParB-like nuclease domain-containing protein	A0A0F7L444	uncultured_marine_virus	2.4e-50	47.8
WP_004251487.1\|3859908_3861135_-	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	2.0e-61	33.2
WP_004247914.1\|3861692_3862355_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_012367822.1\|3862917_3863274_+	hypothetical protein	NA	NA	NA	NA
WP_088207174.1\|3863931_3864927_+	DUF1722 domain-containing protein	NA	NA	NA	NA
WP_004242534.1\|3865811_3866033_+	DUF465 domain-containing protein	NA	NA	NA	NA
WP_004242536.1\|3866458_3866740_+	DUF5339 domain-containing protein	NA	NA	NA	NA
WP_062814330.1\|3867108_3867522_+	hypothetical protein	NA	NA	NA	NA
WP_004251481.1\|3867549_3867792_+	hypothetical protein	NA	NA	NA	NA
WP_004247920.1\|3867854_3868415_-	AAA family ATPase	A0A219VHB7	Ochrobactrum_phage	1.9e-19	50.6
WP_004242542.1\|3868790_3868988_+	ParD-like family protein	NA	NA	NA	NA
WP_004242544.1\|3869005_3869782_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_004242548.1\|3870016_3870400_+	antitermination protein	A0A1W6JNX1	Morganella_phage	2.3e-24	47.8
WP_004247922.1\|3870542_3871406_+	triacylglycerol lipase	NA	NA	NA	NA
WP_004247923.1\|3871516_3871948_-	hypothetical protein	Q7Y3V7	Yersinia_phage	1.8e-20	38.1
WP_088207175.1\|3872066_3872483_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.2e-44	62.0
WP_088207176.1\|3872505_3873678_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	3.9e-179	78.8

DBSCAN-SWA_14

4093652 : 4103644

Escherichia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004242885.1\|4093652_4095710_-	potassium-transporting ATPase subunit KdpB	E4ZFI9	Streptococcus_phage	4.8e-31	26.1
WP_088207217.1\|4095721_4097422_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
WP_004242887.1\|4097757_4098444_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_049203322.1\|4098443_4098905_+	nucleoside deaminase	S4VYZ2	Pandoravirus	2.6e-14	33.8
WP_088207218.1\|4098957_4099569_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	5.6e-28	39.1
WP_088207219.1\|4099708_4100569_-	dimethylsulfoxide reductase	A0A077SK59	Escherichia_phage	2.8e-25	35.5
WP_004242892.1\|4100570_4101188_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	2.2e-72	58.6
WP_017628118.1\|4101199_4103644_-	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	5.6e-220	50.4

Anti-CRISPR protein detection

Acr_ID: NZ_CP021852.1|WP_004250533.1|3689333_3689558_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP021852.1|WP_004250533.1|3689333_3689558_+|hypothetical-protein

3689333_3689558_+

74 aa aa

3670581-3721854

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP021852_1	TypeI-E	1.6\|501724\|32\|NZ_CP021852\|CRISPRCasFinder,CRT,PILER-CR	501724-501755	32	3720315-3720346	0

1. spacer 1.6|501724|32|NZ_CP021852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021852 position: 3720315-3720346, mismatch: 0

ttaactttaaccctgacgaacgtctacgggtt	CRISPR spacer
ttaactttaaccctgacgaacgtctacgggtt	Protospacer
********************************

2. NZ_CP021853

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

62654 : 96996

Escherichia_phage(46.67%)

integrase,transposase

attL 62603:62662|attR 88523:89344

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
62603:62662	attL	NA	NA	NA	NA
WP_001067855.1\|62654_63359_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
62603:62662	attL	NA	NA	NA	NA
WP_088207272.1\|63370_63910_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.7e-82	95.8
WP_004152391.1\|65024_66740_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_004152392.1\|66849_69879_+\|transposase	IS3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004199214.1\|69985_71011_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152394.1\|71007_71787_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_004199234.1\|72173_73055_+	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
WP_004152397.1\|73304_74624_-\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
WP_032640602.1\|77669_78638_-	magnesium and cobalt transport protein CorA	NA	NA	NA	NA
WP_088207273.1\|78918_79923_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_003100847.1\|80001_80559_-	recombinase family protein	A0A0C4UR34	Shigella_phage	3.3e-59	63.2
WP_003100853.1\|80552_80924_-	hypothetical protein	NA	NA	NA	NA
WP_003100856.1\|80920_81421_-	hypothetical protein	NA	NA	NA	NA
WP_003100858.1\|81417_81744_-	hypothetical protein	NA	NA	NA	NA
WP_000215515.1\|81998_82355_-	cupin domain-containing protein	NA	NA	NA	NA
WP_001067855.1\|82621_83326_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_002075255.1\|83423_84437_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	6.1e-72	45.5
83319:84138	attR	NA	NA	NA	NA
WP_032488579.1\|84637_85192_+	aminoglycoside N-acetyltransferase AAC(6')-Ib3	NA	NA	NA	NA
83319:84138	attR	NA	NA	NA	NA
WP_012695455.1\|85419_86160_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	4.4e-43	41.7
WP_077249983.1\|86146_87655_-\|transposase	IS21-like element ISCfr8 family transposase	A0A2L1IVA1	Escherichia_phage	9.9e-26	32.7
WP_001067855.1\|87814_88519_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000113282.1\|88530_89187_-	tetracycline resistance transcriptional repressor TetR(D)	NA	NA	NA	NA
WP_001039466.1\|89282_90467_+	tetracycline efflux MFS transporter Tet(D)	NA	NA	NA	NA
WP_000842134.1\|90561_91671_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	2.8e-33	30.2
WP_001067855.1\|92160_92865_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_064717956.1\|92889_93627_+	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_000214119.1\|93843_95058_+	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	4.2e-19	28.7
WP_001255015.1\|95085_95391_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001120888.1\|95502_96996_+\|transposase	IS91 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP021855

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021855_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021855_1

7056-7168

Orphan

Consensus_repeat	Method
ATATCGGGATTTACACACACAGT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP021855_1

>merge|NZ_CP021855|1|7056-7168|CRISPRCasFinder
TTATCGGGATTCACACACAAATAAATTCATACGATGATCACGAAATATCGGGATTTACACACACAGTAGTTACAATATCAACACAAAAAACATCGGGATTTGCACACAATATA

>NZ_CP021855|1|1|7056-7168|CRISPRCasFinder
TTATCGGGATTCACACACAAATA	AATTCATACGATGATCACGAA
ATATCGGGATTTACACACACAGT	AGTTACAATATCAACACAAAAA
ACATCGGGATTTGCACACAATATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021855.1\|WP_012368893.1\|2183_2486_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP021855.1\|WP_049195517.1\|5663_6068_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_036896461.1\|13024_13276_-\|antitoxin	unknown	unknown	gnl\|CDD\|170091
NZ_CP021855.1\|WP_088207279.1\|8538_9105_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_036896470.1\|10929_11478_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_036896410.1\|9278_9509_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_036896414.1\|7982_8498_+\|J-domain-containing-protein	unknown	unknown	gnl\|CDD\|197617
NZ_CP021855.1\|WP_036896467.1\|11486_12650_+\|relaxase/mobilization-nuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|367497
NZ_CP021855.1\|WP_012368892.1\|1524_2043_-\|colicin-immunity-protein	unknown	unknown	gnl\|CDD\|367697
NZ_CP021855.1\|WP_153274249.1\|9107_9266_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_036896419.1\|4914_5118_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_036896473.1\|9793_10126_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_049195411.1\|5202_5568_-\|DUF2726-domain-containing-protein	unknown	unknown	gnl\|CDD\|371282
NZ_CP021855.1\|WP_049195410.1\|3375_4029_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|349760
NZ_CP021855.1\|WP_036896464.1\|12740_13028_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP021855.1\|WP_012368894.1\|2494_2758_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NZ_CP021855.1\|WP_088207278.1\|785_1445_+\|colicin-immunity-protein	unknown	unknown	gnl\|CDD\|334348
NZ_CP021855.1\|WP_036896424.1\|4272_4554_+\|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	gnl\|CDD\|279710
NZ_CP021855.1\|WP_049195515.1\|9501_9699_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224393

Protein	Function_ID	Function_description	E-value
NZ_CP021855.1\|WP_012368893.1\|2183_2486_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	9.71059e-14
NZ_CP021855.1\|WP_036896461.1\|13024_13276_-\|antitoxin	gnl\|CDD\|170091	PRK09778, PRK09778, type I toxin-antitoxin system antitoxin YafN.	4.3766e-08
NZ_CP021855.1\|WP_036896414.1\|7982_8498_+\|J-domain-containing-protein	gnl\|CDD\|197617	smart00271, DnaJ, DnaJ molecular chaperone homology domain.	1.01469e-11
NZ_CP021855.1\|WP_012368892.1\|1524_2043_-\|colicin-immunity-protein	gnl\|CDD\|367697	pfam03857, Colicin_im, Colicin immunity protein. Colicin immunity proteins are plasmid-encoded proteins necessary for protecting the cell against colicins. Colicins are toxins released by bacteria during times of stress.	2.29694e-07
NZ_CP021855.1\|WP_036896467.1\|11486_12650_+\|relaxase/mobilization-nuclease-domain-containing-protein	gnl\|CDD\|367497	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalyzing trans-esterification.	0.000599034
NZ_CP021855.1\|WP_049195411.1\|5202_5568_-\|DUF2726-domain-containing-protein	gnl\|CDD\|371282	pfam10881, DUF2726, Protein of unknown function (DUF2726). This bacterial family of proteins has no known function.	3.50794e-09
NZ_CP021855.1\|WP_049195410.1\|3375_4029_+\|AAA-family-ATPase	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	1.69774e-21
NZ_CP021855.1\|WP_036896464.1\|12740_13028_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	4.09264e-21
NZ_CP021855.1\|WP_012368894.1\|2494_2758_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	2.57284e-11
NZ_CP021855.1\|WP_088207278.1\|785_1445_+\|colicin-immunity-protein	gnl\|CDD\|334348	pfam01024, Colicin, Colicin pore forming domain.	9.27539e-82
NZ_CP021855.1\|WP_036896424.1\|4272_4554_+\|ribbon-helix-helix-protein,-CopG-family	gnl\|CDD\|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	0.00798589
NZ_CP021855.1\|WP_049195515.1\|9501_9699_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	0.00113214

>NZ_CP021855.1|WP_049195517.1|5663_6068_-|hypothetical-protein
MAKIYQFPQGKEKKEIQAKLKKSRSVKIKKDIKKSSLSHILSMLFLGIRYFLGVTLDVLLLMVVSIISVFRYLIIPLGIFALILFYYNNEKMWNVEMTVTMALMVSSLINPEVLQDIQPFQTLFGVKSPQSEAK
>NZ_CP021855.1|WP_049195411.1|5202_5568_-|DUF2726-domain-containing-protein
MSYLRQQFLTEEESKLLVILQENVKENYHVFCKVRLSEFLYSSQKMGTSEFFNEFEIINSINLPFAIYDTLENQLVAAISYINPIEKSNLLENQDIKVIHLTMLKDTLTNGELSMFYSDSV
>NZ_CP021855.1|WP_036896419.1|4914_5118_+|hypothetical-protein
MKQLTEFELEIIHAVVVLQELHDKPELSASVLKECNLSEIDCNELDDYEKDNLRIINKEYLVNLKGL
>NZ_CP021855.1|WP_036896424.1|4272_4554_+|ribbon-helix-helix-protein,-CopG-family
MKLQKPDLDLTDSSTKTKNSTTQFIKAGDKRPTTSNKLIPSTFRLPESAISILDTEAERAGQNKTAILKAAILAYSNLDENSKNLALLESFKL
>NZ_CP021855.1|WP_049195410.1|3375_4029_+|AAA-family-ATPase
MILVFASDKGGVGKTTTAINMAVMLKRKNKSVIMLKADRNRDLFVWSDIRAQAGFSAIPIHEAFGNISDEIKRLEKLCDVVVVDCAGHDSSEFRSALTVADVLLTLVKPSSSLEKNTLTNVTKTVRTAQKQHGNSDLKAHVLMTRIKSHKLQDAVSLENELKSDEIWLQPLKNRISELDIFENAVNAGVGVHEVEKASSLGVAKAQIELIAKEIGLI
>NZ_CP021855.1|WP_012368894.1|2494_2758_-|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MEIIPAQLAKNQFGDLLMKAQREPVQISKHGKRVAVVISPDEYDQFTQLKLQNLKSILAESIEQAERGELHHIDDVFAPLTSNEIEG
>NZ_CP021855.1|WP_012368893.1|2183_2486_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSVLFTKKAKEHIRTIRRYSLTHWGKNVAETYINCLRITIINIIEKQPSIGIDRSDDLFTGIRSFPVESHIIYYREVENGIEVLAVLHQSQDPYIHIKRD
>NZ_CP021855.1|WP_012368892.1|1524_2043_-|colicin-immunity-protein
MDNKNHPNDHLLIKWGSIFIFISAIPIFIIFYFNDIDILFAVYEKINNIPSTYSSTYPIISKLSFFYCKLSPLIVLLFFIFCYKKLTLVKPIPINKLIINVIFPCLVITIISLYVLYFYNTDISDSGWSILKTISSNKHLLFGYYIAIFLGYYVWLFLFFISFIYLPFKSIR
>NZ_CP021855.1|WP_088207278.1|785_1445_+|colicin-immunity-protein
MVVNAYQSYPQNKKFIQDAEKEALMGAADIITNTGEKISKHLGEKYKTIANEIASDLRNFQGKKLRSLSDALKMMEKINRNPNIKIKQADRVVLANAVRHVDTKILSENFQRLGKSFGVLGKVLSVEKLREKAAIGFETGNWKPLMLEVEAMIISGYATGIAISIAISFISSIASFLAIGALPTTLAIIATIMLISYLASLIDDKVVDKINNLLIPEAH
>NZ_CP021855.1|WP_036896414.1|7982_8498_+|J-domain-containing-protein
MNVQEALNIFGLSGELTEQDIKTAYKKAALKYHPDRNPLGAELMKAINAAFDFLMNNLENINKFQSSDKNTHYNFTEELEEVLLTLSGLMGIIYEVIGNWVWISGETKEHKDTLKEIGCKWAAKKKQWFYRPEEHKSRRNRKEHSIDEIRTMYGTNGQRAATGWQRVENRA
>NZ_CP021855.1|WP_088207279.1|8538_9105_+|hypothetical-protein
MYYYENFNECYQSVFEIVCRCLGDNWRINLLDNDAYRIKITSNRFMGFSIHVREEKNRFSIMGSFDSRIHRGEIHSCTVSKDRNPVHIAEDIKRKIIVFAHDEINKAKESKVKEQEKKEQDLIVKNMLSRLFTMHSSWQSGVIGAFKSDNGLDGMIRKTYSGYKIEIDKLSVDNLIKLAGMITTLERG
>NZ_CP021855.1|WP_153274249.1|9107_9266_+|hypothetical-protein
MEIKRENFDSVFDINKWLKNNKDVKIINIETRKGNITDFTNSYTVWFYVGSY
>NZ_CP021855.1|WP_036896410.1|9278_9509_+|hypothetical-protein
MIKLSKGSKNYYLTRENGQLVFIKNIKVRNKNDVKDGNKTAKKQVYKIIVGIDLLPDEADRSILKSMLEQWKSEYE
>NZ_CP021855.1|WP_049195515.1|9501_9699_+|helix-turn-helix-domain-containing-protein
MNELKRLRDKLGLSNSDLAELMGLSEQTIKNRMASDFNKKTASKLEIEFLKLLAGEHEKYSILEK
>NZ_CP021855.1|WP_036896473.1|9793_10126_+|hypothetical-protein
MKLFHVILNVTNDDFEKNIELKNFYEVAQSLNEVKEKFKIFKNARVSAIVVYDLFLEPVTVKFTMSAYNVHNQVIFCESQPTIVNNTLDLITKLNNYFKQDYLTVDWKYI
>NZ_CP021855.1|WP_036896470.1|10929_11478_+|hypothetical-protein
MKQINFRINDNEYELYHKKVKENLNMSLPSFYKLVGNMMLNKDKDIKETLSDHAISIGEESDYTDKRAYLYLTAEQENALITSAKKHGWSLSREMRFRLQTTLSNEMDFFDQELQEMKLCRNHIKRIGLNINMILRRDEGRVLDKEGMRQDMQALTEQLNELENKFNYFINKCKGRIIANRL
>NZ_CP021855.1|WP_036896467.1|11486_12650_+|relaxase/mobilization-nuclease-domain-containing-protein
MGLDIEKEYRAKRARQESSRSVKSIKSAKSSFVHKVKNGGKFYDRNAQESRIKKGASKEVMTKITGSAKVKQGVRNSVDYISRDDSLELVDEQGIKINAEEAKQSLIDSDDALQLSDKSRRTPDITKNIVFSPPMTAKVKPEEAIEAVRQTLIKKYPDNRFVIAYHDDKKEHPHVHVILKTRKENEDKRIKITKQDLRDLRSGFCDELKLKGYDVKATHKQQIGLKSQLKDDSLTAPKRQKNVYEVIDFGRAPYQFNTKNKSQNYLTVKTLNKGVEATYWGKEFGALCNREKIQKGDLIKLKKIGTEDIKIPKLDDKGQQTGWKITQRNQWEMQNLGVKGVDRTKNILPENSGIKEIQQFQKQQTQFKQQAMELIKKEQQIKVGLKF
>NZ_CP021855.1|WP_036896464.1|12740_13028_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MMYSVKFRKDAEKEWKKLDKTIQSQFAKQLIKRCENPHVASAKLRNMPNCYKIKLRASGFRLVYQVIDDMLIIAVVAVGKREKSQVYNLASERLK
>NZ_CP021855.1|WP_036896461.1|13024_13276_-|antitoxin
MPNTILSDTTASVSELKKNPMATVNAGLGYPVAILNRNQPAFYCVPAELYEQILDALDDNELAKLVKERESQPLVDINLAEYL

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP021855_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021855_2

7247-7367

Orphan

Consensus_repeat	Method
ATATCGGGATTTACACACACAGT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP021855_2

>merge|NZ_CP021855|2|7247-7367|CRISPRCasFinder
TTATCGGGATTTACACACAAAAAACGAAATAATTACTGTACAAATATCAAACAGCGATTCGGGATTTACACACACCTCATTCGGGATTTACACACACTGACACGGGATTTACACACACGGA

>NZ_CP021855|2|2|7247-7367|CRISPRCasFinder
TTATCGGGATTTACACACAAAAA	ACGAAATAATTACTGTACAAATATCAAACAGC
GATTCGGGATTTACACACACCTC	ATTCGGGATTTACACACACT
GACACGGGATTTACACACACGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021855.1\|WP_012368893.1\|2183_2486_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP021855.1\|WP_049195517.1\|5663_6068_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_036896461.1\|13024_13276_-\|antitoxin	unknown	unknown	gnl\|CDD\|170091
NZ_CP021855.1\|WP_088207279.1\|8538_9105_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_036896470.1\|10929_11478_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_036896410.1\|9278_9509_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_036896414.1\|7982_8498_+\|J-domain-containing-protein	unknown	unknown	gnl\|CDD\|197617
NZ_CP021855.1\|WP_036896467.1\|11486_12650_+\|relaxase/mobilization-nuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|367497
NZ_CP021855.1\|WP_012368892.1\|1524_2043_-\|colicin-immunity-protein	unknown	unknown	gnl\|CDD\|367697
NZ_CP021855.1\|WP_153274249.1\|9107_9266_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_036896419.1\|4914_5118_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_036896473.1\|9793_10126_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021855.1\|WP_049195411.1\|5202_5568_-\|DUF2726-domain-containing-protein	unknown	unknown	gnl\|CDD\|371282
NZ_CP021855.1\|WP_049195410.1\|3375_4029_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|349760
NZ_CP021855.1\|WP_036896464.1\|12740_13028_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP021855.1\|WP_012368894.1\|2494_2758_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NZ_CP021855.1\|WP_088207278.1\|785_1445_+\|colicin-immunity-protein	unknown	unknown	gnl\|CDD\|334348
NZ_CP021855.1\|WP_036896424.1\|4272_4554_+\|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	gnl\|CDD\|279710
NZ_CP021855.1\|WP_049195515.1\|9501_9699_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224393

Protein	Function_ID	Function_description	E-value
NZ_CP021855.1\|WP_012368893.1\|2183_2486_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	9.71059e-14
NZ_CP021855.1\|WP_036896461.1\|13024_13276_-\|antitoxin	gnl\|CDD\|170091	PRK09778, PRK09778, type I toxin-antitoxin system antitoxin YafN.	4.3766e-08
NZ_CP021855.1\|WP_036896414.1\|7982_8498_+\|J-domain-containing-protein	gnl\|CDD\|197617	smart00271, DnaJ, DnaJ molecular chaperone homology domain.	1.01469e-11
NZ_CP021855.1\|WP_012368892.1\|1524_2043_-\|colicin-immunity-protein	gnl\|CDD\|367697	pfam03857, Colicin_im, Colicin immunity protein. Colicin immunity proteins are plasmid-encoded proteins necessary for protecting the cell against colicins. Colicins are toxins released by bacteria during times of stress.	2.29694e-07
NZ_CP021855.1\|WP_036896467.1\|11486_12650_+\|relaxase/mobilization-nuclease-domain-containing-protein	gnl\|CDD\|367497	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalyzing trans-esterification.	0.000599034
NZ_CP021855.1\|WP_049195411.1\|5202_5568_-\|DUF2726-domain-containing-protein	gnl\|CDD\|371282	pfam10881, DUF2726, Protein of unknown function (DUF2726). This bacterial family of proteins has no known function.	3.50794e-09
NZ_CP021855.1\|WP_049195410.1\|3375_4029_+\|AAA-family-ATPase	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	1.69774e-21
NZ_CP021855.1\|WP_036896464.1\|12740_13028_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	4.09264e-21
NZ_CP021855.1\|WP_012368894.1\|2494_2758_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	2.57284e-11
NZ_CP021855.1\|WP_088207278.1\|785_1445_+\|colicin-immunity-protein	gnl\|CDD\|334348	pfam01024, Colicin, Colicin pore forming domain.	9.27539e-82
NZ_CP021855.1\|WP_036896424.1\|4272_4554_+\|ribbon-helix-helix-protein,-CopG-family	gnl\|CDD\|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	0.00798589
NZ_CP021855.1\|WP_049195515.1\|9501_9699_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	0.00113214

>NZ_CP021855.1|WP_049195517.1|5663_6068_-|hypothetical-protein
MAKIYQFPQGKEKKEIQAKLKKSRSVKIKKDIKKSSLSHILSMLFLGIRYFLGVTLDVLLLMVVSIISVFRYLIIPLGIFALILFYYNNEKMWNVEMTVTMALMVSSLINPEVLQDIQPFQTLFGVKSPQSEAK
>NZ_CP021855.1|WP_049195411.1|5202_5568_-|DUF2726-domain-containing-protein
MSYLRQQFLTEEESKLLVILQENVKENYHVFCKVRLSEFLYSSQKMGTSEFFNEFEIINSINLPFAIYDTLENQLVAAISYINPIEKSNLLENQDIKVIHLTMLKDTLTNGELSMFYSDSV
>NZ_CP021855.1|WP_036896419.1|4914_5118_+|hypothetical-protein
MKQLTEFELEIIHAVVVLQELHDKPELSASVLKECNLSEIDCNELDDYEKDNLRIINKEYLVNLKGL
>NZ_CP021855.1|WP_036896424.1|4272_4554_+|ribbon-helix-helix-protein,-CopG-family
MKLQKPDLDLTDSSTKTKNSTTQFIKAGDKRPTTSNKLIPSTFRLPESAISILDTEAERAGQNKTAILKAAILAYSNLDENSKNLALLESFKL
>NZ_CP021855.1|WP_049195410.1|3375_4029_+|AAA-family-ATPase
MILVFASDKGGVGKTTTAINMAVMLKRKNKSVIMLKADRNRDLFVWSDIRAQAGFSAIPIHEAFGNISDEIKRLEKLCDVVVVDCAGHDSSEFRSALTVADVLLTLVKPSSSLEKNTLTNVTKTVRTAQKQHGNSDLKAHVLMTRIKSHKLQDAVSLENELKSDEIWLQPLKNRISELDIFENAVNAGVGVHEVEKASSLGVAKAQIELIAKEIGLI
>NZ_CP021855.1|WP_012368894.1|2494_2758_-|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MEIIPAQLAKNQFGDLLMKAQREPVQISKHGKRVAVVISPDEYDQFTQLKLQNLKSILAESIEQAERGELHHIDDVFAPLTSNEIEG
>NZ_CP021855.1|WP_012368893.1|2183_2486_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSVLFTKKAKEHIRTIRRYSLTHWGKNVAETYINCLRITIINIIEKQPSIGIDRSDDLFTGIRSFPVESHIIYYREVENGIEVLAVLHQSQDPYIHIKRD
>NZ_CP021855.1|WP_012368892.1|1524_2043_-|colicin-immunity-protein
MDNKNHPNDHLLIKWGSIFIFISAIPIFIIFYFNDIDILFAVYEKINNIPSTYSSTYPIISKLSFFYCKLSPLIVLLFFIFCYKKLTLVKPIPINKLIINVIFPCLVITIISLYVLYFYNTDISDSGWSILKTISSNKHLLFGYYIAIFLGYYVWLFLFFISFIYLPFKSIR
>NZ_CP021855.1|WP_088207278.1|785_1445_+|colicin-immunity-protein
MVVNAYQSYPQNKKFIQDAEKEALMGAADIITNTGEKISKHLGEKYKTIANEIASDLRNFQGKKLRSLSDALKMMEKINRNPNIKIKQADRVVLANAVRHVDTKILSENFQRLGKSFGVLGKVLSVEKLREKAAIGFETGNWKPLMLEVEAMIISGYATGIAISIAISFISSIASFLAIGALPTTLAIIATIMLISYLASLIDDKVVDKINNLLIPEAH
>NZ_CP021855.1|WP_036896414.1|7982_8498_+|J-domain-containing-protein
MNVQEALNIFGLSGELTEQDIKTAYKKAALKYHPDRNPLGAELMKAINAAFDFLMNNLENINKFQSSDKNTHYNFTEELEEVLLTLSGLMGIIYEVIGNWVWISGETKEHKDTLKEIGCKWAAKKKQWFYRPEEHKSRRNRKEHSIDEIRTMYGTNGQRAATGWQRVENRA
>NZ_CP021855.1|WP_088207279.1|8538_9105_+|hypothetical-protein
MYYYENFNECYQSVFEIVCRCLGDNWRINLLDNDAYRIKITSNRFMGFSIHVREEKNRFSIMGSFDSRIHRGEIHSCTVSKDRNPVHIAEDIKRKIIVFAHDEINKAKESKVKEQEKKEQDLIVKNMLSRLFTMHSSWQSGVIGAFKSDNGLDGMIRKTYSGYKIEIDKLSVDNLIKLAGMITTLERG
>NZ_CP021855.1|WP_153274249.1|9107_9266_+|hypothetical-protein
MEIKRENFDSVFDINKWLKNNKDVKIINIETRKGNITDFTNSYTVWFYVGSY
>NZ_CP021855.1|WP_036896410.1|9278_9509_+|hypothetical-protein
MIKLSKGSKNYYLTRENGQLVFIKNIKVRNKNDVKDGNKTAKKQVYKIIVGIDLLPDEADRSILKSMLEQWKSEYE
>NZ_CP021855.1|WP_049195515.1|9501_9699_+|helix-turn-helix-domain-containing-protein
MNELKRLRDKLGLSNSDLAELMGLSEQTIKNRMASDFNKKTASKLEIEFLKLLAGEHEKYSILEK
>NZ_CP021855.1|WP_036896473.1|9793_10126_+|hypothetical-protein
MKLFHVILNVTNDDFEKNIELKNFYEVAQSLNEVKEKFKIFKNARVSAIVVYDLFLEPVTVKFTMSAYNVHNQVIFCESQPTIVNNTLDLITKLNNYFKQDYLTVDWKYI
>NZ_CP021855.1|WP_036896470.1|10929_11478_+|hypothetical-protein
MKQINFRINDNEYELYHKKVKENLNMSLPSFYKLVGNMMLNKDKDIKETLSDHAISIGEESDYTDKRAYLYLTAEQENALITSAKKHGWSLSREMRFRLQTTLSNEMDFFDQELQEMKLCRNHIKRIGLNINMILRRDEGRVLDKEGMRQDMQALTEQLNELENKFNYFINKCKGRIIANRL
>NZ_CP021855.1|WP_036896467.1|11486_12650_+|relaxase/mobilization-nuclease-domain-containing-protein
MGLDIEKEYRAKRARQESSRSVKSIKSAKSSFVHKVKNGGKFYDRNAQESRIKKGASKEVMTKITGSAKVKQGVRNSVDYISRDDSLELVDEQGIKINAEEAKQSLIDSDDALQLSDKSRRTPDITKNIVFSPPMTAKVKPEEAIEAVRQTLIKKYPDNRFVIAYHDDKKEHPHVHVILKTRKENEDKRIKITKQDLRDLRSGFCDELKLKGYDVKATHKQQIGLKSQLKDDSLTAPKRQKNVYEVIDFGRAPYQFNTKNKSQNYLTVKTLNKGVEATYWGKEFGALCNREKIQKGDLIKLKKIGTEDIKIPKLDDKGQQTGWKITQRNQWEMQNLGVKGVDRTKNILPENSGIKEIQQFQKQQTQFKQQAMELIKKEQQIKVGLKF
>NZ_CP021855.1|WP_036896464.1|12740_13028_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MMYSVKFRKDAEKEWKKLDKTIQSQFAKQLIKRCENPHVASAKLRNMPNCYKIKLRASGFRLVYQVIDDMLIIAVVAVGKREKSQVYNLASERLK
>NZ_CP021855.1|WP_036896461.1|13024_13276_-|antitoxin
MPNTILSDTTASVSELKKNPMATVNAGLGYPVAILNRNQPAFYCVPAELYEQILDALDDNELAKLVKERESQPLVDINLAEYL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP021855_1	1.1\|7079\|21\|NZ_CP021855\|CRISPRCasFinder	7079-7099	21	NZ_CP029129	Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence	11351-11371	0	1.0
NZ_CP021855_1	1.1\|7079\|21\|NZ_CP021855\|CRISPRCasFinder	7079-7099	21	NZ_CP021855	Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence	7079-7099	0	1.0
NZ_CP021855_1	1.1\|7079\|21\|NZ_CP021855\|CRISPRCasFinder	7079-7099	21	NZ_KX832926	Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence	43125-43145	0	1.0
NZ_CP021855_1	1.1\|7079\|21\|NZ_CP021855\|CRISPRCasFinder	7079-7099	21	NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	2594-2614	0	1.0
NZ_CP021855_1	1.1\|7079\|21\|NZ_CP021855\|CRISPRCasFinder	7079-7099	21	NZ_MK941846	Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence	12749-12769	0	1.0
NZ_CP021855_1	1.1\|7079\|21\|NZ_CP021855\|CRISPRCasFinder	7079-7099	21	NZ_MF150117	Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence	157-177	0	1.0
NZ_CP021855_1	1.2\|7123\|22\|NZ_CP021855\|CRISPRCasFinder	7123-7144	22	NZ_KX832926	Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence	43080-43101	0	1.0
NZ_CP021855_1	1.2\|7123\|22\|NZ_CP021855\|CRISPRCasFinder	7123-7144	22	NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	2549-2570	0	1.0
NZ_CP021855_1	1.2\|7123\|22\|NZ_CP021855\|CRISPRCasFinder	7123-7144	22	NZ_MK941846	Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence	12704-12725	0	1.0
NZ_CP021855_1	1.2\|7123\|22\|NZ_CP021855\|CRISPRCasFinder	7123-7144	22	NZ_MF150117	Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence	112-133	0	1.0
NZ_CP021855_1	1.2\|7123\|22\|NZ_CP021855\|CRISPRCasFinder	7123-7144	22	NZ_CP029129	Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence	11395-11416	0	1.0
NZ_CP021855_1	1.2\|7123\|22\|NZ_CP021855\|CRISPRCasFinder	7123-7144	22	NZ_CP021855	Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence	7123-7144	0	1.0
NZ_CP021855_2	2.1\|7270\|32\|NZ_CP021855\|CRISPRCasFinder	7270-7301	32	NZ_CP021855	Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence	7270-7301	0	1.0
NZ_CP021855_2	2.2\|7325\|20\|NZ_CP021855\|CRISPRCasFinder	7325-7344	20	NZ_KX832926	Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence	42880-42899	0	1.0
NZ_CP021855_2	2.2\|7325\|20\|NZ_CP021855\|CRISPRCasFinder	7325-7344	20	NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	2349-2368	0	1.0
NZ_CP021855_2	2.2\|7325\|20\|NZ_CP021855\|CRISPRCasFinder	7325-7344	20	NZ_CP029129	Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence	11597-11616	0	1.0
NZ_CP021855_2	2.2\|7325\|20\|NZ_CP021855\|CRISPRCasFinder	7325-7344	20	NZ_CP021855	Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence	7325-7344	0	1.0
NZ_CP021855_2	2.2\|7325\|20\|NZ_CP021855\|CRISPRCasFinder	7325-7344	20	NZ_MK941846	Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence	12504-12523	0	1.0
NZ_CP021855_2	2.2\|7325\|20\|NZ_CP021855\|CRISPRCasFinder	7325-7344	20	NZ_MF150117	Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence	35971-35990	0	1.0
NZ_CP021855_2	2.1\|7270\|32\|NZ_CP021855\|CRISPRCasFinder	7270-7301	32	NZ_KX832926	Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence	42923-42954	1	0.969
NZ_CP021855_2	2.1\|7270\|32\|NZ_CP021855\|CRISPRCasFinder	7270-7301	32	NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	2392-2423	1	0.969
NZ_CP021855_2	2.1\|7270\|32\|NZ_CP021855\|CRISPRCasFinder	7270-7301	32	NZ_CP029129	Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence	11542-11573	1	0.969
NZ_CP021855_2	2.1\|7270\|32\|NZ_CP021855\|CRISPRCasFinder	7270-7301	32	NZ_MK941846	Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence	12547-12578	1	0.969
NZ_CP021855_2	2.1\|7270\|32\|NZ_CP021855\|CRISPRCasFinder	7270-7301	32	NZ_MF150117	Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence	36014-36045	1	0.969
NZ_CP021855_2	2.2\|7325\|20\|NZ_CP021855\|CRISPRCasFinder	7325-7344	20	NZ_KX832926	Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence	42902-42921	1	0.95
NZ_CP021855_2	2.2\|7325\|20\|NZ_CP021855\|CRISPRCasFinder	7325-7344	20	NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	2371-2390	1	0.95
NZ_CP021855_2	2.2\|7325\|20\|NZ_CP021855\|CRISPRCasFinder	7325-7344	20	NZ_CP029129	Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence	11575-11594	1	0.95
NZ_CP021855_2	2.2\|7325\|20\|NZ_CP021855\|CRISPRCasFinder	7325-7344	20	NZ_CP021855	Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence	7303-7322	1	0.95
NZ_CP021855_2	2.2\|7325\|20\|NZ_CP021855\|CRISPRCasFinder	7325-7344	20	NZ_MK941846	Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence	12526-12545	1	0.95
NZ_CP021855_2	2.2\|7325\|20\|NZ_CP021855\|CRISPRCasFinder	7325-7344	20	NZ_MF150117	Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence	35993-36012	1	0.95
NZ_CP021855_2	2.1\|7270\|32\|NZ_CP021855\|CRISPRCasFinder	7270-7301	32	NZ_CP017264	Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.23, complete sequence	52617-52648	9	0.719
NZ_CP021855_2	2.1\|7270\|32\|NZ_CP021855\|CRISPRCasFinder	7270-7301	32	NZ_CP044362	Lactobacillus paracasei strain TD 062 plasmid unnamed1, complete sequence	5580-5611	9	0.719
NZ_CP021855_2	2.1\|7270\|32\|NZ_CP021855\|CRISPRCasFinder	7270-7301	32	NZ_AP012542	Lactobacillus paracasei subsp. paracasei JCM 8130 plasmid pLBPC-1, complete sequence	5757-5788	9	0.719
NZ_CP021855_2	2.1\|7270\|32\|NZ_CP021855\|CRISPRCasFinder	7270-7301	32	MK448393	Streptococcus satellite phage Javan276, complete genome	5694-5725	9	0.719

1. spacer 1.1|7079|21|NZ_CP021855|CRISPRCasFinder matches to NZ_CP029129 (Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aattcatacgatgatcacgaa	CRISPR spacer
aattcatacgatgatcacgaa	Protospacer
*********************

2. spacer 1.1|7079|21|NZ_CP021855|CRISPRCasFinder matches to NZ_CP021855 (Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

aattcatacgatgatcacgaa	CRISPR spacer
aattcatacgatgatcacgaa	Protospacer
*********************

3. spacer 1.1|7079|21|NZ_CP021855|CRISPRCasFinder matches to NZ_KX832926 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence) position: , mismatch: 0, identity: 1.0

aattcatacgatgatcacgaa	CRISPR spacer
aattcatacgatgatcacgaa	Protospacer
*********************

4. spacer 1.1|7079|21|NZ_CP021855|CRISPRCasFinder matches to NZ_CP026061 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aattcatacgatgatcacgaa	CRISPR spacer
aattcatacgatgatcacgaa	Protospacer
*********************

5. spacer 1.1|7079|21|NZ_CP021855|CRISPRCasFinder matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 0, identity: 1.0

aattcatacgatgatcacgaa	CRISPR spacer
aattcatacgatgatcacgaa	Protospacer
*********************

6. spacer 1.1|7079|21|NZ_CP021855|CRISPRCasFinder matches to NZ_MF150117 (Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence) position: , mismatch: 0, identity: 1.0

aattcatacgatgatcacgaa	CRISPR spacer
aattcatacgatgatcacgaa	Protospacer
*********************

7. spacer 1.2|7123|22|NZ_CP021855|CRISPRCasFinder matches to NZ_KX832926 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence) position: , mismatch: 0, identity: 1.0

agttacaatatcaacacaaaaa	CRISPR spacer
agttacaatatcaacacaaaaa	Protospacer
**********************

8. spacer 1.2|7123|22|NZ_CP021855|CRISPRCasFinder matches to NZ_CP026061 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agttacaatatcaacacaaaaa	CRISPR spacer
agttacaatatcaacacaaaaa	Protospacer
**********************

9. spacer 1.2|7123|22|NZ_CP021855|CRISPRCasFinder matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 0, identity: 1.0

agttacaatatcaacacaaaaa	CRISPR spacer
agttacaatatcaacacaaaaa	Protospacer
**********************

10. spacer 1.2|7123|22|NZ_CP021855|CRISPRCasFinder matches to NZ_MF150117 (Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence) position: , mismatch: 0, identity: 1.0

agttacaatatcaacacaaaaa	CRISPR spacer
agttacaatatcaacacaaaaa	Protospacer
**********************

11. spacer 1.2|7123|22|NZ_CP021855|CRISPRCasFinder matches to NZ_CP029129 (Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

agttacaatatcaacacaaaaa	CRISPR spacer
agttacaatatcaacacaaaaa	Protospacer
**********************

12. spacer 1.2|7123|22|NZ_CP021855|CRISPRCasFinder matches to NZ_CP021855 (Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

agttacaatatcaacacaaaaa	CRISPR spacer
agttacaatatcaacacaaaaa	Protospacer
**********************

13. spacer 2.1|7270|32|NZ_CP021855|CRISPRCasFinder matches to NZ_CP021855 (Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

acgaaataattactgtacaaatatcaaacagc	CRISPR spacer
acgaaataattactgtacaaatatcaaacagc	Protospacer
********************************

14. spacer 2.2|7325|20|NZ_CP021855|CRISPRCasFinder matches to NZ_KX832926 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence) position: , mismatch: 0, identity: 1.0

attcgggatttacacacact	CRISPR spacer
attcgggatttacacacact	Protospacer
********************

15. spacer 2.2|7325|20|NZ_CP021855|CRISPRCasFinder matches to NZ_CP026061 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

attcgggatttacacacact	CRISPR spacer
attcgggatttacacacact	Protospacer
********************

16. spacer 2.2|7325|20|NZ_CP021855|CRISPRCasFinder matches to NZ_CP029129 (Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attcgggatttacacacact	CRISPR spacer
attcgggatttacacacact	Protospacer
********************

17. spacer 2.2|7325|20|NZ_CP021855|CRISPRCasFinder matches to NZ_CP021855 (Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

attcgggatttacacacact	CRISPR spacer
attcgggatttacacacact	Protospacer
********************

18. spacer 2.2|7325|20|NZ_CP021855|CRISPRCasFinder matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 0, identity: 1.0

attcgggatttacacacact	CRISPR spacer
attcgggatttacacacact	Protospacer
********************

19. spacer 2.2|7325|20|NZ_CP021855|CRISPRCasFinder matches to NZ_MF150117 (Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence) position: , mismatch: 0, identity: 1.0

attcgggatttacacacact	CRISPR spacer
attcgggatttacacacact	Protospacer
********************

20. spacer 2.1|7270|32|NZ_CP021855|CRISPRCasFinder matches to NZ_KX832926 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence) position: , mismatch: 1, identity: 0.969

acgaaataattactgtacaaatatcaaacagc	CRISPR spacer
acgaaataattactgtacaaatttcaaacagc	Protospacer
********************** *********

21. spacer 2.1|7270|32|NZ_CP021855|CRISPRCasFinder matches to NZ_CP026061 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

acgaaataattactgtacaaatatcaaacagc	CRISPR spacer
acgaaataattactgtacaaatttcaaacagc	Protospacer
********************** *********

22. spacer 2.1|7270|32|NZ_CP021855|CRISPRCasFinder matches to NZ_CP029129 (Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

acgaaataattactgtacaaatatcaaacagc	CRISPR spacer
acgaaataattactgtacaaatttcaaacagc	Protospacer
********************** *********

23. spacer 2.1|7270|32|NZ_CP021855|CRISPRCasFinder matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 1, identity: 0.969

acgaaataattactgtacaaatatcaaacagc	CRISPR spacer
acgaaataattactgtacaaatttcaaacagc	Protospacer
********************** *********

24. spacer 2.1|7270|32|NZ_CP021855|CRISPRCasFinder matches to NZ_MF150117 (Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence) position: , mismatch: 1, identity: 0.969

acgaaataattactgtacaaatatcaaacagc	CRISPR spacer
acgaaataattactgtacaaatttcaaacagc	Protospacer
********************** *********

25. spacer 2.2|7325|20|NZ_CP021855|CRISPRCasFinder matches to NZ_KX832926 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence) position: , mismatch: 1, identity: 0.95

attcgggatttacacacact	CRISPR spacer
attcgggatttacacacacc	Protospacer
*******************.

26. spacer 2.2|7325|20|NZ_CP021855|CRISPRCasFinder matches to NZ_CP026061 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.95

attcgggatttacacacact	CRISPR spacer
attcgggatttacacacacc	Protospacer
*******************.

27. spacer 2.2|7325|20|NZ_CP021855|CRISPRCasFinder matches to NZ_CP029129 (Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.95

attcgggatttacacacact	CRISPR spacer
attcgggatttacacacacc	Protospacer
*******************.

28. spacer 2.2|7325|20|NZ_CP021855|CRISPRCasFinder matches to NZ_CP021855 (Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence) position: , mismatch: 1, identity: 0.95

attcgggatttacacacact	CRISPR spacer
attcgggatttacacacacc	Protospacer
*******************.

29. spacer 2.2|7325|20|NZ_CP021855|CRISPRCasFinder matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 1, identity: 0.95

attcgggatttacacacact	CRISPR spacer
attcgggatttacacacacc	Protospacer
*******************.

30. spacer 2.2|7325|20|NZ_CP021855|CRISPRCasFinder matches to NZ_MF150117 (Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence) position: , mismatch: 1, identity: 0.95

attcgggatttacacacact	CRISPR spacer
attcgggatttacacacacc	Protospacer
*******************.

31. spacer 2.1|7270|32|NZ_CP021855|CRISPRCasFinder matches to NZ_CP017264 (Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.23, complete sequence) position: , mismatch: 9, identity: 0.719

acgaaataattactgtacaaatatcaaacagc	CRISPR spacer
tgcaaataattacagtataaatatcaaaggaa	Protospacer
   ********** ***.********** ..

32. spacer 2.1|7270|32|NZ_CP021855|CRISPRCasFinder matches to NZ_CP044362 (Lactobacillus paracasei strain TD 062 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

acgaaataattactgtacaaatatcaaacagc	CRISPR spacer
tgcaaataattacagtataaatatcaaaggaa	Protospacer
   ********** ***.********** ..

33. spacer 2.1|7270|32|NZ_CP021855|CRISPRCasFinder matches to NZ_AP012542 (Lactobacillus paracasei subsp. paracasei JCM 8130 plasmid pLBPC-1, complete sequence) position: , mismatch: 9, identity: 0.719

acgaaataattactgtacaaatatcaaacagc	CRISPR spacer
tgcaaataattacagtataaatatcaaaggaa	Protospacer
   ********** ***.********** ..

34. spacer 2.1|7270|32|NZ_CP021855|CRISPRCasFinder matches to MK448393 (Streptococcus satellite phage Javan276, complete genome) position: , mismatch: 9, identity: 0.719

acgaaataattactgtacaaatatcaaacagc	CRISPR spacer
caaaaataattattctacaaatatcaaatttt	Protospacer
  .*********.* *************.  .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP021852

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

2. NZ_CP021853

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP021855

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection