CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP021860	Klebsiella pneumoniae strain AR_0125 plasmid tig00000007_pilon, complete sequence	0 crisprs	NA	0	0
NZ_CP021859	Klebsiella pneumoniae strain AR_0125 chromosome, complete genome	2 crisprs	DEDDh,DinG,RT,csa3,cas3,WYL	0	11
NZ_CP021858	Klebsiella pneumoniae strain AR_0125 plasmid tig00000005_pilon, complete sequence	0 crisprs	RT	0	3
NZ_CP021861	Klebsiella pneumoniae strain AR_0125 plasmid tig00000009_pilon, complete sequence	0 crisprs	NA	0	1
NZ_CP021856	Klebsiella pneumoniae strain AR_0125 plasmid tig00000001_pilon, complete sequence	0 crisprs	csa3	0	6
NZ_CP021857	Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence	1 crisprs	NA	2	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

16771 : 64683

Escherichia_phage(22.22%)

integrase,transposase

attL 49174:49212|attR 67145:67183

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000486719.1\|16771_17896_+\|integrase	site-specific integrase	B5WZU7	Pseudomonas_phage	3.0e-43	40.1
WP_020314983.1\|18135_18561_+	hypothetical protein	NA	NA	NA	NA
WP_000698399.1\|18607_19126_+	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	2.6e-18	38.1
WP_001218543.1\|19141_19546_+	hypothetical protein	NA	NA	NA	NA
WP_020314989.1\|19909_20497_+	hypothetical protein	NA	NA	NA	NA
WP_020314981.1\|20508_22674_+	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	1.9e-30	26.0
WP_000850854.1\|22742_22949_+	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_001356704.1\|23283_23526_+	hypothetical protein	NA	NA	NA	NA
WP_032409841.1\|23770_24211_+	hypothetical protein	NA	NA	NA	NA
WP_020314987.1\|24253_28495_-	hypothetical protein	NA	NA	NA	NA
WP_000730722.1\|28491_28833_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_000717860.1\|29203_29605_+	hypothetical protein	NA	NA	NA	NA
WP_000797966.1\|29622_30375_+	conjugal transfer protein TraL	NA	NA	NA	NA
WP_020806530.1\|30352_31084_+	hypothetical protein	NA	NA	NA	NA
WP_001708405.1\|31103_31523_+	hypothetical protein	A5LH60	Enterobacteria_phage	6.1e-18	47.1
WP_020314988.1\|31524_31788_+	hypothetical protein	A0A2P0P958	Salmonella_phage	3.3e-30	71.3
WP_001229189.1\|31824_32340_+	hypothetical protein	G9L6B3	Escherichia_phage	2.3e-99	97.7
WP_001310435.1\|32336_32657_+	hypothetical protein	A0A0N7KZV3	Escherichia_phage	2.3e-25	90.3
WP_000466318.1\|32787_33225_-	hypothetical protein	A0A0R6PJ17	Moraxella_phage	9.5e-14	34.7
WP_000833470.1\|33249_33432_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_001401700.1\|33976_34159_+	hypothetical protein	NA	NA	NA	NA
WP_020314977.1\|34545_34806_-	hypothetical protein	NA	NA	NA	NA
WP_022540736.1\|35340_35580_-	transcriptional regulator	NA	NA	NA	NA
WP_020314676.1\|35569_35830_-	hypothetical protein	NA	NA	NA	NA
WP_000814381.1\|35881_36106_-	hypothetical protein	NA	NA	NA	NA
WP_020314678.1\|36202_36412_-	hypothetical protein	NA	NA	NA	NA
WP_020314677.1\|36453_36777_-	hypothetical protein	A0A0F6WCW0	Sinorhizobium_phage	3.5e-13	46.5
WP_000151456.1\|37357_37600_-	hypothetical protein	NA	NA	NA	NA
WP_001230709.1\|37596_37851_-	hypothetical protein	NA	NA	NA	NA
WP_001083904.1\|37847_38390_-	hypothetical protein	NA	NA	NA	NA
WP_000957857.1\|38936_39125_+	hypothetical protein	NA	NA	NA	NA
WP_000948429.1\|39134_40334_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_088207303.1\|40448_40697_-	DnaJ domain-containing protein	F2Y2Y5	Organic_Lake_phycodnavirus	2.1e-05	46.3
WP_001542022.1\|41100_41430_-	hypothetical protein	NA	NA	NA	NA
WP_000532148.1\|42016_42682_+	P-loop NTPase	A0A0A8IL09	Aurantimonas_phage	5.0e-06	31.3
WP_000186151.1\|42869_43040_+	hypothetical protein	NA	NA	NA	NA
WP_001310439.1\|43057_43630_-	hypothetical protein	NA	NA	NA	NA
WP_001434039.1\|43803_43965_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_020314815.1\|45373_46402_-	RepA protein, IncFII family	NA	NA	NA	NA
WP_001358485.1\|47479_47986_+	CaiF/GrlA family transcriptional regulator	NA	NA	NA	NA
WP_000049865.1\|47978_48173_+	DUF1187 family protein	NA	NA	NA	NA
WP_072105959.1\|48218_49172_+	SPFH/Band 7/PHB domain protein	A0A2K9L3L2	Tupanvirus	1.6e-21	30.1
49174:49212	attL	NA	NA	NA	NA
WP_000027057.1\|49321_50182_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_000722315.1\|50881_51706_-	oxacillin-hydrolyzing class D beta-lactamase OXA-9	NA	NA	NA	NA
WP_001206315.1\|51765_52554_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_014454105.1\|52623_53178_-	aminoglycoside N-acetyltransferase AAC(6')-Ib'	NA	NA	NA	NA
WP_001217881.1\|53411_53969_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.0e-93	98.4
WP_004152391.1\|55083_56799_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_004152392.1\|56908_59938_+\|transposase	IS3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004199214.1\|60044_61070_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152394.1\|61066_61846_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_004152396.1\|62232_63114_+	carbapenem-hydrolyzing class A beta-lactamase KPC-3	A0A1B0VBP7	Salmonella_phage	2.8e-73	52.2
WP_004152397.1\|63363_64683_-\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
67145:67183	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP021858

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 16054

Escherichia_phage(37.5%)

integrase,transposase

attL 3023:3082|attR 29071:29198

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001039464.1\|2552_2939_+	hypothetical protein	NA	NA	NA	NA
3023:3082	attL	NA	NA	NA	NA
WP_001118624.1\|3078_4002_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-171	96.4
WP_004152765.1\|6616_8101_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_000776034.1\|8509_8941_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.6e-29	53.3
WP_001754953.1\|8940_10212_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	5.4e-150	63.7
WP_006797589.1\|10293_11271_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	5.0e-87	54.1
WP_000368714.1\|11267_12473_-	ParA family protein	A0A077SL49	Escherichia_phage	2.4e-163	69.6
WP_000339857.1\|12887_13157_+	hypothetical protein	NA	NA	NA	NA
WP_004118283.1\|13333_14200_-	replication initiation protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
WP_000764642.1\|14962_15220_+	hypothetical protein	NA	NA	NA	NA
WP_000015958.1\|15277_16054_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	6.4e-53	92.9
29071:29198	attR	NA	NA	NA	NA

DBSCAN-SWA_2

20148 : 25273

Enterobacteria_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022644723.1\|20148_23154_-\|transposase	Tn3-like element Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	99.6
WP_001235713.1\|23315_23873_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_001067855.1\|24568_25273_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_3

28313 : 46012

Salmonella_phage(33.33%)

integrase,transposase

attL 20643:20657|attR 46280:46294

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
20643:20657	attL	NA	NA	NA	NA
WP_073553194.1\|28313_28541_-	hypothetical protein	A0A1B0V7H9	Salmonella_phage	1.9e-05	71.1
WP_000602738.1\|30174_30927_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.4e-41	44.7
WP_000742814.1\|31348_32374_-	aminoglycoside O-phosphotransferase APH(4)-Ia	NA	NA	NA	NA
WP_001199192.1\|32602_33379_-	aminoglycoside N-acetyltransferase AAC(3)-IV	NA	NA	NA	NA
WP_001067858.1\|33492_34197_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_011264039.1\|34269_34509_+	macrolide transporter	A0A2K5B2B5	Erysipelothrix_phage	9.5e-08	46.2
WP_000612791.1\|34654_35518_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
WP_001354008.1\|35555_35801_+	hypothetical protein	NA	NA	NA	NA
WP_000034420.1\|36269_37061_+	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
WP_000800531.1\|38240_38573_-	quaternary ammonium compound efflux SMR transporter QacL	NA	NA	NA	NA
WP_001206316.1\|38742_39534_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000095725.1\|39626_40886_-	chloramphenicol efflux MFS transporter CmlA1	S4TR35	Salmonella_phage	4.8e-26	31.7
WP_001261740.1\|41147_41939_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000050382.1\|41996_42605_-	HAD-IB family hydrolase	NA	NA	NA	NA
WP_001456218.1\|42700_43543_-	alpha/beta fold putative hydrolase EstX	NA	NA	NA	NA
WP_000845048.1\|43709_44723_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_000454193.1\|44925_45276_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_001161490.1\|45451_46012_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	1.1e-59	100.0
46280:46294	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP021856

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 37425

Escherichia_phage(35.71%)

transposase,integrase,protease

attL 332:346|attR 17673:17687

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
332:346	attL	NA	NA	NA	NA
WP_000147567.1\|2559_3120_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_000454193.1\|3245_3596_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845039.1\|3798_4812_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001083725.1\|4956_5454_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
WP_001336345.1\|5565_5856_+	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_001206356.1\|5861_6653_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000679427.1\|6816_7164_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|7157_7997_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000376616.1\|8124_8328_+	hypothetical protein	NA	NA	NA	NA
WP_000184001.1\|8483_9689_+	chromate efflux transporter	NA	NA	NA	NA
WP_000130000.1\|9699_10005_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001389365.1\|10231_10996_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001137892.1\|11488_12073_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000004159.1\|12072_13311_-	MFS transporter	NA	NA	NA	NA
WP_000219391.1\|13307_14213_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_001067855.1\|14334_15039_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|15189_16005_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_044117068.1\|16194_16863_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.9e-130	99.5
WP_001067855.1\|18166_18871_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
17673:17687	attR	NA	NA	NA	NA
WP_004153729.1\|19726_20554_+	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-20	37.6
WP_004152695.1\|20550_21414_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004152694.1\|21422_22250_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_004152693.1\|22258_23269_+	phosphonate dehydrogenase PtxD	A0A1V0SBV6	Catovirus	1.4e-15	25.1
WP_004152692.1\|23262_24132_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000019473.1\|25340_26321_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_004118209.1\|27522_27786_-\|transposase	transposase	NA	NA	NA	NA
WP_004118208.1\|27800_28064_+	hypothetical protein	NA	NA	NA	NA
WP_004152118.1\|28307_28589_+	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	5.2e-05	38.2
WP_004152117.1\|28623_29193_+	small heat shock protein sHSP20	NA	NA	NA	NA
WP_004152116.1\|29307_32103_+	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	5.2e-129	41.0
WP_004152115.1\|32102_32300_+	hypothetical protein	NA	NA	NA	NA
WP_009483782.1\|32537_33287_+	diguanylate cyclase	NA	NA	NA	NA
WP_004152113.1\|33273_34236_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_020314316.1\|36078_37425_-\|transposase	ISNCY family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

41548 : 45855

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152101.1\|41548_41899_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	1.4e-23	50.9
WP_004152100.1\|41948_42311_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_004152099.1\|42328_44080_+	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA
WP_004152098.1\|44127_45417_+	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.9e-171	74.0
WP_004152097.1\|45429_45855_+	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	72.9

DBSCAN-SWA_3

49312 : 50023

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085903505.1\|49312_50023_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	2.9e-92	77.0

DBSCAN-SWA_4

54541 : 56619

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152084.1\|54541_55942_-	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	4.1e-18	26.3
WP_001188930.1\|55938_56619_-	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4

DBSCAN-SWA_5

61712 : 68969

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004118669.1\|61712_62450_+	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
WP_000843497.1\|62483_62681_-	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_004098955.1\|62721_65169_-	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	7.6e-84	35.8
WP_000758228.1\|65295_65736_-	hypothetical protein	NA	NA	NA	NA
WP_004098958.1\|65822_68969_-	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	4.0e-61	22.5

DBSCAN-SWA_6

72342 : 145114

Stx2-converting_phage(15.0%)

transposase,integrase

attL 86459:86473|attR 129491:129505

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001572351.1\|72342_73023_+	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.1e-31	35.6
WP_003032875.1\|73015_74491_+	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.0e-27	30.1
WP_004178091.1\|74741_75173_+	silver-binding protein SilE	NA	NA	NA	NA
WP_085955172.1\|76601_77808_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-100	63.2
WP_004178088.1\|78848_80846_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	9.7e-21	25.9
WP_004152070.1\|80908_82186_+	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_020444838.1\|83168_84623_-	EAL domain-containing protein	NA	NA	NA	NA
WP_004197688.1\|85224_85482_+	hypothetical protein	NA	NA	NA	NA
WP_004152067.1\|86154_87078_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.1e-175	98.4
86459:86473	attL	NA	NA	NA	NA
WP_071527918.1\|87142_87454_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004152065.1\|87480_88428_-	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	1.8e-12	30.6
WP_000957857.1\|89921_90110_+	hypothetical protein	NA	NA	NA	NA
WP_000948429.1\|90119_91319_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_004152063.1\|92716_93727_-	replication initiation protein	J9Q7H0	Salmonella_phage	8.8e-87	55.9
WP_000523813.1\|94478_95645_+	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	1.4e-224	97.7
WP_004152062.1\|95644_96616_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	4.1e-150	86.6
WP_000948429.1\|100622_101822_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000957857.1\|101831_102020_-	hypothetical protein	NA	NA	NA	NA
WP_004152291.1\|103675_104992_-	ATP-binding protein	NA	NA	NA	NA
WP_004152290.1\|104995_107305_-	ATPase	NA	NA	NA	NA
WP_003846917.1\|109010_110264_-	lactose permease	NA	NA	NA	NA
WP_004152287.1\|110315_113390_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.7
WP_004152286.1\|113511_114594_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	6.8e-186	96.4
WP_004152284.1\|115054_116065_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_071527925.1\|116443_116686_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004118251.1\|117016_117310_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-49	96.9
WP_004152282.1\|117408_118176_-	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
WP_004152281.1\|118176_119133_-	Fe(3+) dicitrate ABC transporter permease subunit FecD	NA	NA	NA	NA
WP_004118243.1\|119129_120128_-	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
WP_004118241.1\|120124_121027_-	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
WP_004152280.1\|121071_123396_-	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
WP_004118237.1\|123481_124435_-	fec operon regulator FecR	NA	NA	NA	NA
WP_004118235.1\|124431_124953_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_004118231.1\|126055_126223_+\|integrase	integrase	NA	NA	NA	NA
WP_004118840.1\|126507_127635_+	transporter substrate-binding protein	NA	NA	NA	NA
WP_004118229.1\|127631_128225_+	ANTAR domain-containing protein	NA	NA	NA	NA
WP_004152279.1\|128221_129070_+	ABC transporter permease	NA	NA	NA	NA
WP_004118227.1\|129069_129990_+	ABC transporter permease	NA	NA	NA	NA
129491:129505	attR	NA	NA	NA	NA
WP_004152278.1\|130002_131607_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004118225.1\|131651_132599_+	acetamidase/formamidase family protein	A0A1V0S8X7	Catovirus	9.6e-11	22.7
WP_004118832.1\|132606_134340_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.9e-15	29.6
WP_004152557.1\|138162_138510_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.0e-59	95.7
WP_020956879.1\|138506_138893_-\|transposase	transposase	B6DZU5	Stx2-converting_phage	1.1e-58	90.7
WP_004118217.1\|139440_140076_-	His-Xaa-Ser repeat protein HxsA	NA	NA	NA	NA
WP_000005560.1\|140072_141185_-	His-Xaa-Ser system radical SAM maturase HxsC	S5WIP3	Leptospira_phage	1.5e-47	33.8
WP_004118216.1\|141177_142566_-	His-Xaa-Ser system radical SAM maturase HxsB	S5VT21	Leptospira_phage	6.3e-51	29.0
WP_000333416.1\|142565_142838_-	His-Xaa-Ser system protein HxsD	NA	NA	NA	NA
WP_000412211.1\|144454_145114_+	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP021859

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021859_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021859_1

3944523-3944608

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021859_1

>merge|NZ_CP021859|1|3944523-3944608|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>NZ_CP021859|1|1|3944523-3944608|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021859.1\|WP_004147026.1\|3938615_3940964_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP021859.1\|WP_002888337.1\|3942067_3942766_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP021859.1\|WP_002888345.1\|3944705_3946070_+\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP021859.1\|WP_002888320.1\|3933493_3933973_+\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP021859.1\|WP_002888327.1\|3936279_3937269_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP021859.1\|WP_002888340.1\|3942755_3944381_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP021859.1\|WP_002888353.1\|3953162_3953858_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP021859.1\|WP_002888370.1\|3957555_3958401_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP021859.1\|WP_002888357.1\|3953995_3955498_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP021859.1\|WP_002888332.1\|3941207_3942035_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP021859.1\|WP_002888329.1\|3937274_3938561_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP021859.1\|WP_002888324.1\|3935461_3936283_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP021859.1\|WP_004151368.1\|3947535_3950442_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP021859.1\|WP_002888349.1\|3950629_3952987_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP021859.1\|WP_002888368.1\|3955508_3957218_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP021859.1\|WP_002888348.1\|3946863_3947523_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP021859.1\|WP_002888347.1\|3946249_3946789_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP021859.1\|WP_002888373.1\|3958529_3959297_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP021859.1\|WP_002888321.1\|3934228_3935077_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP021859.1\|WP_002888323.1\|3935081_3935459_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098

Protein	Function_ID	Function_description	E-value
NZ_CP021859.1\|WP_004147026.1\|3938615_3940964_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP021859.1\|WP_002888337.1\|3942067_3942766_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP021859.1\|WP_002888345.1\|3944705_3946070_+\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP021859.1\|WP_002888320.1\|3933493_3933973_+\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP021859.1\|WP_002888327.1\|3936279_3937269_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP021859.1\|WP_002888340.1\|3942755_3944381_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_CP021859.1\|WP_002888353.1\|3953162_3953858_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP021859.1\|WP_002888370.1\|3957555_3958401_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP021859.1\|WP_002888357.1\|3953995_3955498_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP021859.1\|WP_002888332.1\|3941207_3942035_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP021859.1\|WP_002888329.1\|3937274_3938561_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP021859.1\|WP_002888324.1\|3935461_3936283_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP021859.1\|WP_004151368.1\|3947535_3950442_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP021859.1\|WP_002888349.1\|3950629_3952987_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP021859.1\|WP_002888368.1\|3955508_3957218_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP021859.1\|WP_002888348.1\|3946863_3947523_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP021859.1\|WP_002888347.1\|3946249_3946789_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP021859.1\|WP_002888373.1\|3958529_3959297_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP021859.1\|WP_002888321.1\|3934228_3935077_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP021859.1\|WP_002888323.1\|3935081_3935459_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74

>NZ_CP021859.1|WP_002888340.1|3942755_3944381_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP021859.1|WP_002888337.1|3942067_3942766_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP021859.1|WP_002888332.1|3941207_3942035_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP021859.1|WP_004147026.1|3938615_3940964_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP021859.1|WP_002888329.1|3937274_3938561_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP021859.1|WP_002888327.1|3936279_3937269_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP021859.1|WP_002888324.1|3935461_3936283_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP021859.1|WP_002888323.1|3935081_3935459_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP021859.1|WP_002888321.1|3934228_3935077_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP021859.1|WP_002888320.1|3933493_3933973_+|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP021859.1|WP_002888345.1|3944705_3946070_+|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP021859.1|WP_002888347.1|3946249_3946789_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP021859.1|WP_002888348.1|3946863_3947523_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP021859.1|WP_004151368.1|3947535_3950442_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP021859.1|WP_002888349.1|3950629_3952987_-|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP021859.1|WP_002888353.1|3953162_3953858_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP021859.1|WP_002888357.1|3953995_3955498_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP021859.1|WP_002888368.1|3955508_3957218_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>NZ_CP021859.1|WP_002888370.1|3957555_3958401_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP021859.1|WP_002888373.1|3958529_3959297_+|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR

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Crispr_ID: NZ_CP021859_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021859_2

4773596-4773673

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021859_2

>merge|NZ_CP021859|2|4773596-4773673|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>NZ_CP021859|2|2|4773596-4773673|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021859.1\|WP_002895652.1\|4780274_4780487_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021859.1\|WP_004151700.1\|4776912_4778070_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP021859.1\|WP_004151696.1\|4763714_4764998_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP021859.1\|WP_002895648.1\|4778801_4779524_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP021859.1\|WP_002895655.1\|4780898_4782920_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP021859.1\|WP_002895580.1\|4775875_4776916_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP021859.1\|WP_004147672.1\|4771664_4773047_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP021859.1\|WP_002895358.1\|4767486_4768212_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
NZ_CP021859.1\|WP_002895420.1\|4770039_4771566_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP021859.1\|WP_004151701.1\|4783097_4783190_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021859.1\|WP_002895578.1\|4774372_4775662_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP021859.1\|WP_004151697.1\|4765254_4766472_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
NZ_CP021859.1\|WP_004152853.1\|4779465_4780188_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP021859.1\|WP_004151698.1\|4766468_4767425_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
NZ_CP021859.1\|WP_002895575.1\|4773825_4774302_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP021859.1\|WP_004151699.1\|4768354_4770043_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
NZ_CP021859.1\|WP_002895280.1\|4760624_4760837_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|313818
NZ_CP021859.1\|WP_004142100.1\|4778053_4778809_+\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP021859.1\|WP_002895283.1\|4761572_4762079_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021859.1\|WP_002895284.1\|4762095_4763019_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225813

Protein	Function_ID	Function_description	E-value
NZ_CP021859.1\|WP_004151700.1\|4776912_4778070_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP021859.1\|WP_004151696.1\|4763714_4764998_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP021859.1\|WP_002895648.1\|4778801_4779524_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
NZ_CP021859.1\|WP_002895655.1\|4780898_4782920_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP021859.1\|WP_002895580.1\|4775875_4776916_+\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP021859.1\|WP_004147672.1\|4771664_4773047_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP021859.1\|WP_002895358.1\|4767486_4768212_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
NZ_CP021859.1\|WP_002895420.1\|4770039_4771566_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP021859.1\|WP_002895578.1\|4774372_4775662_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP021859.1\|WP_004151697.1\|4765254_4766472_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
NZ_CP021859.1\|WP_004152853.1\|4779465_4780188_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74
NZ_CP021859.1\|WP_004151698.1\|4766468_4767425_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	8.10638e-178
NZ_CP021859.1\|WP_002895575.1\|4773825_4774302_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
NZ_CP021859.1\|WP_004151699.1\|4768354_4770043_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
NZ_CP021859.1\|WP_002895280.1\|4760624_4760837_-\|hypothetical-protein	gnl\|CDD\|313818	pfam10684, BDM, Putative biofilm-dependent modulation protein. This is a family of tightly conserved proteins from Enterobacteriaceae which are annotated as being biofilm-dependent modulation protein homologs.	0.00154989
NZ_CP021859.1\|WP_004142100.1\|4778053_4778809_+\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
NZ_CP021859.1\|WP_002895284.1\|4762095_4763019_-\|acyltransferase-family-protein	gnl\|CDD\|225813	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only].	6.63632e-09

>NZ_CP021859.1|WP_004147672.1|4771664_4773047_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>NZ_CP021859.1|WP_002895420.1|4770039_4771566_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLTRLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>NZ_CP021859.1|WP_004151699.1|4768354_4770043_+|urocanate-hydratase
MSQSKYRQLDVRAPRGTTLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARNWECYDAIVKALKNLESDETLLVQSGKPVGVFKTHENSPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYQGSLKGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLRTRYVDEQATSLDDALARIKKYTAEGRAISIALCGNAAEIVPELVKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>NZ_CP021859.1|WP_002895358.1|4767486_4768212_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>NZ_CP021859.1|WP_004151698.1|4766468_4767425_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIVRAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRVGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRNGKLQAVDLVEFNPLFDIDGQGARAAARLAWQIAHWWR
>NZ_CP021859.1|WP_004151697.1|4765254_4766472_+|imidazolonepropionase
MTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>NZ_CP021859.1|WP_004151696.1|4763714_4764998_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATIGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>NZ_CP021859.1|WP_002895284.1|4762095_4763019_-|acyltransferase-family-protein
MTAVTFFTIYNTWDRFDYDYHWILGLLTFISTIATPLFFVVAGYLDAQTRHDANWQIGKIKSVVIVFLFWVTVYYVWEPYQRGYLIQPWFIFALIVIYTFHPLIAWLSQRRGLFFAVLLTLLCCSYGYDLLSVIYPDRHLFSLPPQYRLWTWLLFYLTGQLFNDPKVAEWIRNPQVIKGSIIALPFVYLFTWFYERHFFFALFKADRNAFILTGSQIYILIVLLVIAANAVQFKKNREWKEAVLATVSKAMTGVYILHYSVFHLLVMLIPVHSLATKLGVIALTFVLSVLISLAALSSTLLRKVITL
>NZ_CP021859.1|WP_002895283.1|4761572_4762079_+|hypothetical-protein
MRGKSVMLLAGLASLAQANELNLYSVNTGSYVYHLTNNHGQYTENFENHFFSVERKFSADSKYSLLLGTMNNSFNDRCLALGVRRDWYHSGSGWTFKGVYGYTGEFFFDAFEHCGDHGSYKDFKDATGIGFSPYIYHAIQYNFTDYFAVESGIIIPSVFVISIQWSFR
>NZ_CP021859.1|WP_002895280.1|4760624_4760837_-|hypothetical-protein
MHIKNTIPAEFVFNSALMKNIENTLIKQHRTVNNERMITEIQHRLQTESNEILSDLYLQALDMLYSKPHH
>NZ_CP021859.1|WP_002895575.1|4773825_4774302_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>NZ_CP021859.1|WP_002895578.1|4774372_4775662_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVTAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>NZ_CP021859.1|WP_002895580.1|4775875_4776916_+|biotin-synthase-BioB
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>NZ_CP021859.1|WP_004151700.1|4776912_4778070_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALVDWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGKVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>NZ_CP021859.1|WP_004142100.1|4778053_4778809_+|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>NZ_CP021859.1|WP_002895648.1|4778801_4779524_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>NZ_CP021859.1|WP_004152853.1|4779465_4780188_-|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>NZ_CP021859.1|WP_002895652.1|4780274_4780487_-|hypothetical-protein
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPPFSVGHRKSAAPALTRPDGIGV
>NZ_CP021859.1|WP_002895655.1|4780898_4782920_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP021859.1|WP_004151701.1|4783097_4783190_+|hypothetical-protein
MQKINFREYLAVATALVIIVAFFHQWVLTF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

49279 : 89051

uncultured_Caudovirales_phage(35.42%)

integrase,transposase,terminase

attL 47360:47374|attR 56300:56314

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
47360:47374	attL	NA	NA	NA	NA
WP_004152144.1\|49279_50041_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5
WP_004152145.1\|50257_51790_+	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
WP_016197745.1\|51988_52537_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_004152147.1\|52733_53915_+\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
WP_004152148.1\|53895_54138_-	hypothetical protein	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
WP_004152149.1\|54316_54796_-	hypothetical protein	NA	NA	NA	NA
WP_004152150.1\|54792_55005_-	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
WP_004152151.1\|55001_55226_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
WP_004154298.1\|55215_55926_-	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
WP_004152153.1\|55931_56450_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
56300:56314	attR	NA	NA	NA	NA
WP_004152154.1\|56554_57382_-	hypothetical protein	Q8W654	Enterobacteria_phage	5.5e-111	84.0
WP_004152155.1\|57378_57573_-	hypothetical protein	NA	NA	NA	NA
WP_004152156.1\|57569_57995_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
WP_004177208.1\|57991_58210_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	6.6e-32	98.6
WP_004152157.1\|58181_58436_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
WP_004152158.1\|58428_58794_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
WP_004152159.1\|58963_59152_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
WP_004152160.1\|59144_59459_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
WP_004152161.1\|59629_60298_-	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
WP_004152162.1\|60395_60617_+	helix-turn-helix transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
WP_004198228.1\|61193_62852_+	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
WP_004198233.1\|62853_63816_+	zinc-binding domain of primase-helicase family protein	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
WP_004198239.1\|63812_64289_+	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
WP_004152167.1\|64285_65068_+	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
WP_004146526.1\|65473_65722_+	hypothetical protein	NA	NA	NA	NA
WP_004152169.1\|65724_66255_+	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
WP_004153952.1\|66251_66641_+	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
WP_004152170.1\|66875_67196_+	hypothetical protein	NA	NA	NA	NA
WP_004152171.1\|67297_68050_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
WP_004152172.1\|68000_69401_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
WP_004152173.1\|69638_71090_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
WP_004152174.1\|71145_71694_+	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
WP_004199270.1\|71745_72948_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
WP_000528476.1\|72951_73446_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
WP_001132269.1\|73457_74399_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
WP_000725700.1\|74438_74720_+	hypothetical protein	NA	NA	NA	NA
WP_000113538.1\|74688_75108_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
WP_000834982.1\|75104_75611_+	hypothetical protein	NA	NA	NA	NA
WP_001116156.1\|75610_75997_+	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
WP_004152176.1\|76091_76532_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
WP_004152177.1\|76535_77681_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
WP_004152178.1\|77691_77982_+	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	2.6e-23	85.5
WP_085955245.1\|77922_79115_-\|transposase	IS3-like element ISKpn18 family transposase	U5P429	Shigella_phage	3.5e-50	43.5
WP_004152564.1\|79441_79867_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
WP_004152565.1\|79902_80055_+	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
WP_004152566.1\|80044_82048_+	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
WP_004152567.1\|82047_82647_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
WP_004152568.1\|82647_82950_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
WP_004152569.1\|82952_83975_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
WP_004152570.1\|83974_84316_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
WP_004199301.1\|84365_84548_+	hypothetical protein	NA	NA	NA	NA
WP_004152571.1\|84590_85157_+	hypothetical protein	NA	NA	NA	NA
WP_004152572.1\|85210_85864_+	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
WP_004152573.1\|85865_86219_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_004152574.1\|86218_87415_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
WP_004152575.1\|87411_88185_+	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
WP_004152576.1\|88184_89051_+	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5

DBSCAN-SWA_2

310777 : 321664

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210516.1\|310777_311398_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
WP_004151609.1\|311390_312656_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
WP_004151610.1\|312667_313570_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
WP_002210513.1\|313830_314592_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004176269.1\|314612_315473_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_002904006.1\|315770_316031_+	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
WP_001620097.1\|316117_317206_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_004151612.1\|317236_318502_-	MFS transporter	NA	NA	NA	NA
WP_004151613.1\|318556_321664_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6

DBSCAN-SWA_3

977441 : 1020541

Microcystis_virus(25.0%)

tRNA,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002910404.1\|977441_978698_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_002910405.1\|978968_979580_+	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_002910406.1\|979576_980428_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_002910407.1\|980611_981559_+	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	2.3e-44	37.5
WP_004152259.1\|981683_983363_+	C4-dicarboxylic acid transporter DauA	A0A2H4J153	uncultured_Caudovirales_phage	7.9e-24	23.4
WP_002910436.1\|983363_984410_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_002910437.1\|984632_984908_-	stress-induced protein YchH	NA	NA	NA	NA
WP_002910438.1\|985180_985765_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_002910443.1\|985882_986974_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_002910446.1\|987056_987266_-	DUF1869 domain-containing protein	NA	NA	NA	NA
WP_002910453.1\|987467_988382_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004152260.1\|988513_989929_-	membrane protein	NA	NA	NA	NA
WP_004152261.1\|989948_990392_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_002910493.1\|990394_990931_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_002910494.1\|990911_991958_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_002910495.1\|991957_993721_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004152262.1\|993854_997265_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_004198077.1\|997248_998406_-	hypothetical protein	NA	NA	NA	NA
WP_002910497.1\|998409_998676_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_004227463.1\|998973_999231_-	hypothetical protein	NA	NA	NA	NA
WP_029779706.1\|999419_999656_-	hypothetical protein	NA	NA	NA	NA
WP_000019473.1\|999779_1000760_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_004152632.1\|1001096_1001987_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	4.1e-11	29.8
WP_002910539.1\|1002162_1003056_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	2.8e-12	27.1
WP_004152633.1\|1003231_1004125_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	1.7e-12	27.3
WP_002910544.1\|1004308_1005202_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	6.7e-14	30.5
WP_004152634.1\|1005223_1006663_-	hypothetical protein	NA	NA	NA	NA
WP_002910549.1\|1006768_1006999_-	hypothetical protein	NA	NA	NA	NA
WP_002910551.1\|1007044_1007551_-	hypothetical protein	NA	NA	NA	NA
WP_004153085.1\|1007547_1007877_-	hypothetical protein	NA	NA	NA	NA
WP_004199326.1\|1007873_1008056_-	hypothetical protein	NA	NA	NA	NA
WP_004153456.1\|1008197_1009121_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.6e-172	97.1
WP_002910586.1\|1010771_1011281_-	hypothetical protein	NA	NA	NA	NA
WP_002910591.1\|1011517_1012024_-	hypothetical protein	NA	NA	NA	NA
WP_002910593.1\|1012020_1012530_-	hypothetical protein	NA	NA	NA	NA
WP_004152319.1\|1012530_1013886_-	hypothetical protein	NA	NA	NA	NA
WP_004152317.1\|1016849_1018547_-	OmpA family protein	NA	NA	NA	NA
WP_004152316.1\|1018550_1019204_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_002910645.1\|1019200_1020541_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_4

1288228 : 1295853

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152482.1\|1288228_1289230_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.2e-30	28.6
WP_004152483.1\|1289423_1290590_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.7
WP_004152484.1\|1290770_1291325_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.8e-52	58.2
WP_004152485.1\|1291339_1292230_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	33.6
WP_004152486.1\|1292261_1293131_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.8e-111	67.0
WP_004152487.1\|1293157_1294222_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.4e-105	55.0
WP_004152488.1\|1294446_1295853_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7

DBSCAN-SWA_5

1332420 : 1339327

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004151135.1\|1332420_1333899_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.1e-29	28.3
WP_002912634.1\|1333895_1334618_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	6.4e-31	33.2
WP_002912635.1\|1334936_1336298_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	2.5e-206	94.5
WP_002912636.1\|1336543_1337437_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_002912638.1\|1337679_1338453_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-25	36.3
WP_004175147.1\|1338463_1339327_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5

DBSCAN-SWA_6

1668040 : 1712883

Salmonella_phage(40.43%)

holin,integrase,tail,terminase

attL 1660832:1660846|attR 1710303:1710317

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1660832:1660846	attL	NA	NA	NA	NA
WP_004152009.1\|1668040_1669909_+	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6
WP_004152707.1\|1670128_1670611_-	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	3.0e-61	80.6
WP_004152706.1\|1670607_1671237_-	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	3.1e-90	76.4
WP_004146393.1\|1671226_1671532_-\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	82.4
WP_004146394.1\|1671518_1671923_-	membrane protein	T1SA79	Salmonella_phage	9.3e-56	84.1
WP_004152705.1\|1672207_1673149_-	hypothetical protein	A0A2H5BN49	Klebsiella_phage	2.8e-164	89.4
WP_004152432.1\|1674730_1675027_+	hypothetical protein	A0A0F6R8M4	Escherichia_coli_O157_typing_phage	1.1e-24	64.0
WP_004152433.1\|1675341_1676031_+	hypothetical protein	G9L6E2	Escherichia_phage	1.6e-79	65.2
WP_071531206.1\|1676116_1676500_-	hypothetical protein	NA	NA	NA	NA
WP_004152434.1\|1676642_1679408_-	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	94.5
WP_004152435.1\|1679407_1681318_-	hypothetical protein	Q858F9	Salmonella_phage	5.2e-290	81.9
WP_004152436.1\|1681317_1684149_-	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	75.7
WP_004152437.1\|1684159_1684699_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	6.1e-71	80.0
WP_004152438.1\|1684698_1685163_-	hypothetical protein	Q858G2	Salmonella_phage	1.5e-70	81.2
WP_004152439.1\|1685162_1687661_-	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.0
WP_004152440.1\|1687660_1688266_-	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	2.8e-88	78.5
WP_004152441.1\|1688265_1688589_-	hypothetical protein	G9L6C8	Escherichia_phage	5.3e-46	85.0
WP_004152442.1\|1688639_1688981_-	hypothetical protein	G9L6C7	Escherichia_phage	4.0e-36	70.8
WP_004152443.1\|1688991_1689429_-	hypothetical protein	A0A193GYT9	Enterobacter_phage	4.8e-66	91.0
WP_004152444.1\|1689482_1690469_-	hypothetical protein	A0A193GZ49	Enterobacter_phage	1.6e-178	93.9
WP_004152445.1\|1690483_1691164_-	peptidase	G9L6C4	Escherichia_phage	4.0e-75	83.5
WP_004152446.1\|1691166_1691463_-	hypothetical protein	T1SBI9	Salmonella_phage	1.2e-33	70.4
WP_004152447.1\|1691459_1693142_-\|tail	tail protein	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	2.3e-265	84.6
WP_004141368.1\|1693156_1693363_-	hypothetical protein	T1SA67	Salmonella_phage	4.8e-08	88.2
WP_004152449.1\|1694164_1694476_+	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	2.5e-16	45.2
WP_004154331.1\|1694542_1696018_-	hypothetical protein	Q858H3	Salmonella_phage	3.8e-280	93.1
WP_004152523.1\|1696014_1696599_-\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.4e-89	88.1
WP_004152524.1\|1696676_1696934_-	hypothetical protein	NA	NA	NA	NA
WP_004152525.1\|1697008_1697347_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	4.7e-45	80.0
WP_004152526.1\|1697346_1697586_-	hypothetical protein	G8C7S3	Escherichia_phage	4.6e-10	48.0
WP_004152527.1\|1697578_1698247_-	DUF551 domain-containing protein	Q6UAT8	Klebsiella_phage	1.5e-05	52.5
WP_004141386.1\|1698243_1698456_-	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
WP_004152529.1\|1698626_1699370_-	hypothetical protein	A6N3G8	Burkholderia_virus	1.5e-19	59.5
WP_004152530.1\|1699366_1699792_-	hypothetical protein	NA	NA	NA	NA
WP_004152531.1\|1699788_1699980_-	hypothetical protein	NA	NA	NA	NA
WP_004152532.1\|1699963_1700374_-	hypothetical protein	A0A2P1MXC5	Escherichia_phage	3.1e-14	42.2
WP_004152534.1\|1700566_1700914_-	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	5.0e-50	82.6
WP_004152535.1\|1701033_1701819_-	replication protein	A0A193GYX1	Enterobacter_phage	8.2e-133	87.4
WP_004207253.1\|1701815_1702583_-	hypothetical protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
WP_004152537.1\|1702582_1702792_-	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
WP_004152538.1\|1702938_1703172_-	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
WP_004152539.1\|1703325_1703907_+	helix-turn-helix transcriptional regulator	Q858D7	Salmonella_phage	1.9e-65	64.8
WP_004164029.1\|1704273_1704573_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
WP_004152541.1\|1704569_1705469_+	endonuclease	Q858E0	Salmonella_phage	1.5e-159	93.0
WP_004152542.1\|1705478_1706501_+	recombination protein RecT	Q858E1	Salmonella_phage	2.4e-180	95.3
WP_004152543.1\|1706552_1706801_+	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	1.1e-27	69.5
WP_004153052.1\|1706910_1707204_+	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	8.9e-32	71.1
WP_004152545.1\|1707196_1707355_+	DUF1317 family protein	T1SAR0	Salmonella_phage	1.9e-17	78.8
WP_004152546.1\|1707351_1707945_+	adenine methylase	T1SA14	Salmonella_phage	4.3e-110	92.4
WP_004152547.1\|1707941_1708124_+	hypothetical protein	NA	NA	NA	NA
WP_004152548.1\|1708120_1708312_+	hypothetical protein	NA	NA	NA	NA
WP_004152549.1\|1708328_1709579_-\|integrase	tyrosine-type recombinase/integrase	A0A1X9TCT6	Enterobacter_phage	1.4e-206	85.3
WP_004151979.1\|1709771_1711349_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
1710303:1710317	attR	NA	NA	NA	NA
WP_004151980.1\|1711416_1712883_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7

DBSCAN-SWA_7

1784233 : 1863843

Salmonella_phage(71.43%)

integrase,tail,head,portal,tRNA,plate,capsid,coat,lysis,terminase

attL 1828937:1828983|attR 1865504:1865550

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002914079.1\|1784233_1784971_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_002914082.1\|1785102_1786434_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
WP_002914084.1\|1786479_1786863_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
WP_002914088.1\|1787176_1787866_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
WP_002914089.1\|1787923_1789009_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_002914091.1\|1789212_1789638_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
WP_002914092.1\|1789707_1790406_+	DTW domain-containing protein	NA	NA	NA	NA
WP_004151994.1\|1790440_1793101_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_002914094.1\|1793221_1794577_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_002914095.1\|1794618_1794942_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_002914097.1\|1794945_1796244_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
WP_004150973.1\|1802209_1804783_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
WP_002914109.1\|1804912_1805644_-	polyphenol oxidase	NA	NA	NA	NA
WP_002914110.1\|1805640_1806621_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_004145664.1\|1806752_1807490_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_002914111.1\|1807760_1808096_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_100250063.1\|1808202_1808250_+	hypothetical protein	NA	NA	NA	NA
WP_004150975.1\|1808350_1809511_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_002914112.1\|1809507_1810380_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_002914113.1\|1810442_1811564_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_002914114.1\|1811573_1812644_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
WP_004174804.1\|1812986_1813496_+	YfiR family protein	NA	NA	NA	NA
WP_002914116.1\|1813488_1814712_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_002914117.1\|1814725_1815208_+	OmpA family protein	NA	NA	NA	NA
WP_002914118.1\|1815216_1816587_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_002914119.1\|1816643_1817102_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_002914145.1\|1817221_1817569_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_002914147.1\|1817608_1818376_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_004150977.1\|1818407_1818956_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002914149.1\|1818974_1819223_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_002914152.1\|1819482_1820847_-	signal recognition particle protein	NA	NA	NA	NA
WP_002914153.1\|1821010_1821802_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_004149392.1\|1821821_1823108_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_002914155.1\|1823227_1823818_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_002914158.1\|1823942_1824821_+	NAD(+) kinase	NA	NA	NA	NA
WP_002914159.1\|1824907_1826569_+	DNA repair protein RecN	NA	NA	NA	NA
WP_002914160.1\|1826716_1827058_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_002914161.1\|1827124_1827415_-	RnfH family protein	NA	NA	NA	NA
WP_004188817.1\|1827404_1827881_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_002914164.1\|1827991_1828474_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
1828937:1828983	attL	NA	NA	NA	NA
WP_004150980.1\|1829077_1829455_+	hypothetical protein	NA	NA	NA	NA
WP_004150981.1\|1829482_1829701_-	positive regulator of late gene transcription	Q53ZE7	Salmonella_virus	1.9e-26	72.2
WP_004150982.1\|1829767_1830862_-	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
WP_004150983.1\|1830858_1831344_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
WP_004150984.1\|1831340_1833971_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.9e-115	41.9
WP_002896220.1\|1833963_1834083_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_004150985.1\|1834097_1834397_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
WP_004150986.1\|1834449_1834965_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
WP_004150987.1\|1834974_1836147_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
WP_004150988.1\|1836295_1837369_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
WP_004200602.1\|1837420_1838539_-	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
WP_004150990.1\|1838548_1840498_-\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
WP_004152935.1\|1840499_1841171_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
WP_004150992.1\|1841163_1842072_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
WP_004150993.1\|1842058_1842421_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
WP_004150994.1\|1842417_1842990_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
WP_004150995.1\|1843084_1843951_+	hypothetical protein	NA	NA	NA	NA
WP_004150996.1\|1843973_1844420_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
WP_004150997.1\|1844412_1844835_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
WP_004150998.1\|1844930_1845359_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
WP_004150999.1\|1845355_1845739_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
WP_004151000.1\|1845743_1846253_-	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
WP_004134639.1\|1846233_1846449_-	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
WP_004151001.1\|1846452_1846656_-\|tail	tail protein X	E5G6M9	Salmonella_phage	9.8e-30	89.6
WP_004151002.1\|1846655_1847120_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
WP_004134644.1\|1847215_1847869_-\|terminase	terminase endonuclease subunit	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
WP_004151003.1\|1847872_1848925_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
WP_004151004.1\|1848941_1849775_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
WP_019405037.1\|1849915_1851679_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
WP_004151006.1\|1851678_1852722_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
WP_024940854.1\|1852778_1853048_-	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
WP_004151007.1\|1853569_1854571_+	hypothetical protein	NA	NA	NA	NA
WP_004151008.1\|1854570_1855650_+	hypothetical protein	NA	NA	NA	NA
WP_004151009.1\|1855636_1856320_+	hypothetical protein	NA	NA	NA	NA
WP_004151010.1\|1856415_1856649_-	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
WP_004151011.1\|1856660_1856849_-	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
WP_004151012.1\|1857011_1859396_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
WP_004151013.1\|1859392_1860244_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
WP_004151014.1\|1860240_1860468_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
WP_004151016.1\|1860467_1860701_-	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
WP_004144796.1\|1860768_1861107_-	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
WP_004151017.1\|1861070_1861271_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
WP_004151018.1\|1861278_1861788_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
WP_001397669.1\|1861820_1862063_-	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
WP_004151019.1\|1862185_1862815_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
WP_004151020.1\|1862817_1863843_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	1.5e-190	93.8
1865504:1865550	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2582999 : 2631842

uncultured_Caudovirales_phage(66.67%)

protease,tail,head,portal,tRNA,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002918465.1\|2582999_2583494_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8
WP_002918467.1\|2583497_2584136_-	stringent starvation protein A	NA	NA	NA	NA
WP_000829818.1\|2584447_2584840_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_002918559.1\|2584855_2585284_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_004144945.1\|2585549_2586677_-	cell division protein ZapE	NA	NA	NA	NA
WP_002918565.1\|2586867_2587266_+	DUF1043 family protein	NA	NA	NA	NA
WP_002918566.1\|2587439_2588807_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
WP_002918568.1\|2588894_2589953_+	outer membrane-stress sensor serine endopeptidase DegS	NA	NA	NA	NA
WP_002918570.1\|2590089_2591028_-	malate dehydrogenase	NA	NA	NA	NA
WP_002918625.1\|2591442_2591913_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_002918626.1\|2592288_2592552_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918627.1\|2592650_2592917_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918629.1\|2592967_2593243_-	hypothetical protein	NA	NA	NA	NA
WP_002918632.1\|2593322_2595290_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_002918639.1\|2595295_2596228_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_002918640.1\|2596235_2596439_-	AaeX family protein	NA	NA	NA	NA
WP_002918641.1\|2596570_2597500_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_002918642.1\|2597535_2598981_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_004150952.1\|2599069_2602867_-	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_002918644.1\|2602904_2604374_-	ribonuclease G	NA	NA	NA	NA
WP_002918646.1\|2604376_2604958_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_002918648.1\|2604965_2605454_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_004149974.1\|2605453_2606446_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_002918653.1\|2606516_2607560_-	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
WP_002918686.1\|2607865_2609806_-	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_002918687.1\|2609885_2610077_-	hypothetical protein	NA	NA	NA	NA
WP_002918688.1\|2610305_2611307_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_002918689.1\|2611306_2611915_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_002918732.1\|2612138_2612591_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_002918736.1\|2612613_2613081_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_002918738.1\|2613091_2614441_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_002918740.1\|2614551_2614794_+	YhdT family protein	NA	NA	NA	NA
WP_002918742.1\|2614783_2616235_+	sodium/pantothenate symporter	NA	NA	NA	NA
WP_002918745.1\|2616246_2617128_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_004144972.1\|2617485_2618451_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_000462905.1\|2618475_2618772_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_004150954.1\|2618925_2619117_-	hypothetical protein	NA	NA	NA	NA
WP_004150955.1\|2619119_2620781_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
WP_000113647.1\|2620764_2621121_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
WP_004150959.1\|2621396_2621840_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
WP_001547824.1\|2621839_2622139_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
WP_004150961.1\|2622135_2622471_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
WP_004150962.1\|2622467_2623709_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
WP_001547826.1\|2623710_2624271_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
WP_001549743.1\|2624322_2625489_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
WP_004150963.1\|2625752_2626265_+	hypothetical protein	NA	NA	NA	NA
WP_004150964.1\|2626313_2626649_-	hypothetical protein	NA	NA	NA	NA
WP_004150965.1\|2626991_2629127_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
WP_001549749.1\|2629126_2629492_-	hypothetical protein	NA	NA	NA	NA
WP_004150966.1\|2629488_2629857_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
WP_004150967.1\|2629853_2630168_-	hypothetical protein	NA	NA	NA	NA
WP_001549752.1\|2630160_2630349_-	hypothetical protein	NA	NA	NA	NA
WP_106918304.1\|2630341_2630611_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
WP_004150969.1\|2631062_2631842_-	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5

DBSCAN-SWA_9

4196258 : 4207912

Enterobacteria_phage(70.0%)

integrase

attL 4184392:4184406|attR 4207449:4207463

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4184392:4184406	attL	NA	NA	NA	NA
WP_002889890.1\|4196258_4198592_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
WP_002889897.1\|4198603_4198924_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_002889911.1\|4198920_4199148_-	hypothetical protein	NA	NA	NA	NA
WP_024940872.1\|4199144_4199702_-	ash family protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
WP_002889915.1\|4199698_4199965_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_002889917.1\|4200506_4201244_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	9.0e-73	60.7
WP_002889919.1\|4201240_4201486_+	hypothetical protein	Q7M294	Enterobacteria_phage	1.9e-19	58.0
WP_002889930.1\|4201503_4202070_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
WP_004152979.1\|4202638_4203064_-	hypothetical protein	NA	NA	NA	NA
WP_004152029.1\|4203063_4204014_-	cobyrinic acid a,c-diamide synthase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
WP_002889938.1\|4204001_4205192_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
WP_002889940.1\|4205544_4206798_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
WP_004144574.1\|4206808_4207912_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
4207449:4207463	attR	NA	NA	NA	NA

DBSCAN-SWA_10

4867169 : 4904505

Salmonella_phage(84.62%)

integrase,tail,head,portal,plate,capsid,lysis,terminase

attL 4867077:4867095|attR 4904577:4904595

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4867077:4867095	attL	NA	NA	NA	NA
WP_004151720.1\|4867169_4868222_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
WP_004152765.1\|4868640_4870125_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004150866.1\|4870223_4871168_-	hypothetical protein	NA	NA	NA	NA
WP_004152885.1\|4871179_4872058_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.7e-30	39.9
WP_000188448.1\|4872203_4872425_+	hypothetical protein	NA	NA	NA	NA
WP_000460893.1\|4872457_4872967_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_000956179.1\|4872974_4873175_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
WP_000963473.1\|4873138_4873480_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
WP_004150864.1\|4873547_4873781_+	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
WP_000752622.1\|4873780_4874008_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
WP_004150863.1\|4874004_4874862_+	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
WP_004150862.1\|4874858_4877273_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
WP_001154434.1\|4877426_4877615_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_001217575.1\|4877625_4877859_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_000700647.1\|4877973_4878651_+	hypothetical protein	NA	NA	NA	NA
WP_004199124.1\|4878926_4880669_+	AIPR family protein	NA	NA	NA	NA
WP_002895959.1\|4880730_4881756_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
WP_004150858.1\|4881755_4883522_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
WP_002895967.1\|4883664_4884498_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
WP_002895972.1\|4884514_4885573_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
WP_000059191.1\|4885576_4886227_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_002896151.1\|4886322_4886787_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
WP_002896155.1\|4886786_4886990_+\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_002896158.1\|4886993_4887209_+	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
WP_002896161.1\|4887189_4887699_+	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
WP_002896163.1\|4887703_4888087_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
WP_002896168.1\|4888083_4888512_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
WP_002896172.1\|4888607_4889039_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
WP_002896175.1\|4889031_4889478_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
WP_004150857.1\|4889474_4890167_-	hypothetical protein	NA	NA	NA	NA
WP_002896177.1\|4890261_4890834_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
WP_002896179.1\|4890830_4891193_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	5.8e-49	84.7
WP_002896182.1\|4891179_4892088_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
WP_004150856.1\|4892080_4892680_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
WP_004152882.1\|4892681_4895633_+	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
WP_002896186.1\|4895636_4896368_+	hypothetical protein	NA	NA	NA	NA
WP_002896188.1\|4896364_4896568_+	hypothetical protein	NA	NA	NA	NA
WP_002896191.1\|4896597_4897674_+\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
WP_002896193.1\|4897812_4898985_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
WP_002896201.1\|4898994_4899510_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
WP_002896204.1\|4899562_4899862_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
WP_002896220.1\|4899876_4899996_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_002896222.1\|4899988_4902616_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
WP_002896224.1\|4902612_4903098_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
WP_002896225.1\|4903094_4904195_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
WP_000972391.1\|4904286_4904505_+	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	7.5e-20	69.0
4904577:4904595	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4938921 : 4948385

Dickeya_phage(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002896440.1\|4938921_4940037_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_004150848.1\|4940033_4941974_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896516.1\|4942050_4942272_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896520.1\|4942597_4942915_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896522.1\|4942945_4945225_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_001040187.1\|4945345_4945564_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_002898014.1\|4945917_4946619_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_004150847.1\|4946663_4948385_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_CP021857

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021857_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021857_1

68209-68377

Orphan

Consensus_repeat	Method
ATAATTAAATCATGATTTAATG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP021857_1

>merge|NZ_CP021857|1|68209-68377|PILER-CR
ATAATTAAATCATGATTTCATTTATTTTTATGCTATTGTAATTTAAGTCATTATTGTTTTGCATGTTTTACTGAAATCATTAAATCATGATTTAATGTTGTTCCTTTACCTCAGCTATGTCATAGTTAGCTTAGTTGTAGAACTTGATAATGAAATCATGATTTAATGA

>NZ_CP021857|1|1|68209-68377|PILER-CR
ATAATTAAATCATGATTTCATTT	ATTTTTATGCTATTGTAATTTAAGTCATTATTGTTTTGCATGTTTTACTGAAATCAT
TAAATCATGATTTAATGTTGTTC	CTTTACCTCAGCTATGTCATAGTTAGCTTAGTTGTAGAACTTGATAATG
AAATCATGATTTAATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021857.1\|WP_020314646.1\|65202_65814_+\|DUF2913-family-protein	unknown	unknown	gnl\|CDD\|371392
NZ_CP021857.1\|WP_020314635.1\|71193_71439_-\|DinI-like-family-protein	unknown	unknown	gnl\|CDD\|368780
NZ_CP021857.1\|WP_020314642.1\|67170_67791_-\|resolvase	unknown	unknown	gnl\|CDD\|239736
NZ_CP021857.1\|WP_020314639.1\|65810_66764_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|227751
NZ_CP021857.1\|WP_000235177.1\|57931_58330_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319923
NZ_CP021857.1\|WP_022644720.1\|60062_63101_+\|Tn3-family-transposase	unknown	unknown	gnl\|CDD\|376561
NZ_CP021857.1\|WP_020314648.1\|64606_64885_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021857.1\|WP_009652884.1\|58395_59232_+\|S-formylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|131868
NZ_CP021857.1\|WP_000470624.1\|59259_59895_-\|serine-recombinase	unknown	unknown	gnl\|CDD\|239736
NZ_CP021857.1\|WP_020314645.1\|73275_73686_+\|DUF1380-domain-containing-protein	unknown	unknown	gnl\|CDD\|369222
NZ_CP021857.1\|WP_046960466.1\|70747_71197_-\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	unknown	unknown	gnl\|CDD\|182350
NZ_CP021857.1\|WP_020314631.1\|71642_71873_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021857.1\|WP_020314640.1\|73732_74500_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021857.1\|WP_020314652.1\|69461_70736_-\|Y-family-DNA-polymerase	unknown	unknown	gnl\|CDD\|179607
NZ_CP021857.1\|WP_001567660.1\|63124_64147_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|226077
NZ_CP021857.1\|WP_022644718.1\|68388_69015_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
NZ_CP021857.1\|WP_020314634.1\|69059_69287_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021857.1\|WP_022644719.1\|66884_67151_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021857.1\|WP_020314651.1\|72307_73009_+\|DNA-methylase	unknown	unknown	gnl\|CDD\|184255
NZ_CP021857.1\|WP_020314641.1\|73008_73230_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP021857.1\|WP_020314646.1\|65202_65814_+\|DUF2913-family-protein	gnl\|CDD\|371392	pfam11140, DUF2913, Protein of unknown function (DUF2913). This family of proteins with unknown function appear to be restricted to Gammaproteobacteria.	4.82332e-14
NZ_CP021857.1\|WP_020314635.1\|71193_71439_-\|DinI-like-family-protein	gnl\|CDD\|368780	pfam06183, DinI, DinI-like family. This family of short proteins includes DNA-damage-inducible protein I (DinI) and related proteins. The SOS response, a set of cellular phenomena exhibited by eubacteria, is initiated by various causes that include DNA damage-induced replication arrest, and is positively regulated by the co- protease activity of RecA. Escherichia coli DinI, a LexA-regulated SOS gene product, shuts off the initiation of the SOS response when overexpressed in vivo. Biochemical and genetic studies indicated that DinI physically interacts with RecA to inhibit its co-protease activity. The structure of DinI is known.	2.94757e-08
NZ_CP021857.1\|WP_020314642.1\|67170_67791_-\|resolvase	gnl\|CDD\|239736	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subgroup is composed of proteins similar to the E. coli resolvase found in the par region of the RP4 plasmid, which encodes a highly efficient partitioning system. This protein is part of a complex stabilization system involved in the resolution of plasmid dimers during cell division. Similar to Tn3 and other resolvases, members of this family may contain a C-terminal DNA binding domain.	1.67235e-69
NZ_CP021857.1\|WP_020314639.1\|65810_66764_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|227751	COG5464, COG5464, Uncharacterized conserved protein [Function unknown].	2.6724e-120
NZ_CP021857.1\|WP_000235177.1\|57931_58330_+\|VOC-family-protein	gnl\|CDD\|319923	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	2.83252e-43
NZ_CP021857.1\|WP_022644720.1\|60062_63101_+\|Tn3-family-transposase	gnl\|CDD\|376561	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain. This family includes transposases of Tn3, Tn21, Tn1721, Tn2501, Tn3926 transposons from E-coli. The specific binding of the Tn3 transposase to DNA has been demonstrated. Sequence analysis has suggested that the invariant triad of Asp689, Asp765, Glu895 (numbering as in Tn3) may correspond to the D-D-35-E motif previously implicated in the catalysis of numerous transposases.	0
NZ_CP021857.1\|WP_020314652.1\|69461_70736_-\|Y-family-DNA-polymerase	gnl\|CDD\|179607	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC.	0
NZ_CP021857.1\|WP_009652884.1\|58395_59232_+\|S-formylglutathione-hydrolase	gnl\|CDD\|131868	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. [Cellular processes, Detoxification].	2.23439e-133
NZ_CP021857.1\|WP_020314645.1\|73275_73686_+\|DUF1380-domain-containing-protein	gnl\|CDD\|369222	pfam07128, DUF1380, Protein of unknown function (DUF1380). This family consists of several hypothetical bacterial proteins of around 140 residues in length. Members of this family seem to be specific to Enterobacteria. The function of this family is unknown.	1.70233e-23
NZ_CP021857.1\|WP_046960466.1\|70747_71197_-\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	gnl\|CDD\|182350	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit.	1.88389e-55
NZ_CP021857.1\|WP_001567660.1\|63124_64147_+\|IS110-family-transposase	gnl\|CDD\|226077	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.61883e-54
NZ_CP021857.1\|WP_022644718.1\|68388_69015_+\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	1.14227e-14
NZ_CP021857.1\|WP_000470624.1\|59259_59895_-\|serine-recombinase	gnl\|CDD\|239736	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subgroup is composed of proteins similar to the E. coli resolvase found in the par region of the RP4 plasmid, which encodes a highly efficient partitioning system. This protein is part of a complex stabilization system involved in the resolution of plasmid dimers during cell division. Similar to Tn3 and other resolvases, members of this family may contain a C-terminal DNA binding domain.	1.74126e-75
NZ_CP021857.1\|WP_020314651.1\|72307_73009_+\|DNA-methylase	gnl\|CDD\|184255	PRK13699, PRK13699, putative methylase; Provisional.	1.77673e-153

>NZ_CP021857.1|WP_020314642.1|67170_67791_-|resolvase
MFVFGYLRASTSEQDASRAKNVLKAFANQHGHRIAGWYIDNVSGTTMNRPELIRLLGDAEPGDVILIEQVDRLTRLDDAGWETLRKQITDKQLAIVSLDLPTSYLALSSTVSDDFTRSMLKAVNGMMLDMLAAIARKDYEDRRRRQSEGISKAKAEGKYRGRVADAQKHELIRTLRLVNGKSLRETARLAGVSKMTVIRVCSSADK
>NZ_CP021857.1|WP_022644719.1|66884_67151_-|hypothetical-protein
MKTKKIPLVIYTVIVAGLTILGTRLYDSVSDTTDPAIANGPFWAGLCVKTDSKDGMNELICSNIRIFVKAEDYDRSVRKRELSGILND
>NZ_CP021857.1|WP_020314639.1|65810_66764_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MKKKNSTPTPHDATFRQFLTQPDIARDFMELHLPAELQAICDLSTLKLESGSFIEDDLRQYFSDVLYSLKTTAGDGYVHVLIEHQSSPDKHMAFRLIRYAVAAMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDPILAGTLYSSAFPLVDVTVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPILLAGYLSSSQVVSLVHYIVQAGETSDAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGIQQGIEQGIQLGEQRGIEKGEREATLKIARTMLQNGIDRNTVMKVTGLTEEDLAQIRH
>NZ_CP021857.1|WP_020314646.1|65202_65814_+|DUF2913-family-protein
MALTHKTGHLAWCALVALALARKEQGELSPAQENLFLTRWLAAALKQRRFSRDVAQDIGWLLNQGRLLGVRAKLADKLDYVWRSCSGELTEQNDMFRLTYALETAKDMGWNYRVMSDREWAGRYALVLNPGVNGVYLLRTNLDAAFDDNGQQTNPLTARLTGSVAGVMKLLNRCGWQAEPESGASLPHQYSLMAGQGVPGKGD
>NZ_CP021857.1|WP_020314648.1|64606_64885_+|hypothetical-protein
MRVAEHIILDALTRGGCIKTFWRISSRQAAESSARIPEGYILESPGEREDIVLSHADFHALEKQLEQKETWEQVVGVTCFGGVTWQLRAGSV
>NZ_CP021857.1|WP_001567660.1|63124_64147_+|IS110-family-transposase
MTITTVGIDLAKNVFAVHCVDQNGKTVLVKSRVTRAALPGLIAGLPPCVIGMEACSGAHYWARLFRQYGHEPRLMAAKFVSPYRMAGKSGKNDAADAQAICEAVRRPHMRFVPVKDESQQAMQCLHRTRQGFIEEKTATYNRLRGLISEFGVIAPQSTDALRHIVFEQKNSLPLQVQQCVDDLLEHVARIEDNIAEYDRILSRMAKTDHRSQRLMELKGVGPTTACALVASIGNAHDFKNGRQLAAWLGLTPSQYSSGGKSKLGRITKAGDSYLRTLLVQGARSVLIGAEKRTDLFSRWVCSLVERRGYWRAVVAIAAKNARLCWASLHYGDDFRLYSAS
>NZ_CP021857.1|WP_022644720.1|60062_63101_+|Tn3-family-transposase
MARRQILSLSERESLLALPDEELTLTRMAYFSEHDLALISAHRKPASRFGFAVLLCYLKNVGFTPDKKIPPSDALLKHIASRLKLTGDLWPAYLSGRETTRREHLTELYRYLGLKAFTGKIQQDCITHLLPMATRTDKGILLAEELLVWLRQNNVIIPSIDVVERSCAEAMAGGDKIVFQTLNAPLTPAHRDALDCLLESSDNQSSRLTWLLQPPGKINGKNVLQHLDRLSSIESLALPEGIDRTIHQNRLLKLAREGRKMSSRDLTRFSAARRHAILVCVLEEARATLTDEVIELHERMLNSLFSKAKRTQAERLQQTGKLIQSKLRQYINVGQALSDARDSGGDPWLAIENILPWPEFVASLEETRHLARKNNFDPLHIITEKYSTLRKYAPRMLSALQLIATPAAQPLADALVVIKDMYRKQSRKVPATAPLEFVPESWRKVVITPAGIDRQYYEFCALSELKGALRSGDIWVKGSRRYKNFDDYLIPEKDFDKLTPALPLPVSADYHEYITSRMTLLQSRLEEVNAMAALGELPDVEISYRGVKVSPLDNSVPVQVSPLAELVYSMLPRPKITEILDEVNSWTTFTRHFSHIKTDITRPDIRLLLTTILADGINLGLTKMAEACPGSTKSSLEDIQAWYIRDETYSAALAELVNAQGKRPLAAFWGDGTTSSSDGQNFRTGRSGRYAGQVNPKYGQEPGRQFYTHISDQYSPFYTCIISRVRDSTHVLDGLLYHESDLEIREHYTDTAGFTDHVFALMHLLGFAFCPRIRDLHDKKLFIKGKAGQYPALQSLISTTSLNLKEIEIHWREVLRLATSIKQGTVTASLMLKKLASYPKQNGLAKALREIGRIERTLFMLDWFRDPALRRRVQAGLNKGEARNALARAVFMHRLGEIRDRKPENQSYRASGLTLLTAAISLWNTVYMERAVDALKRKGVKINEQLLSHLSPLGWEHINLTGDYIWKSNRIPSAGKFRRLRPAKLGRSKNNLNEWKGLPLIMRLINSCAIMG
>NZ_CP021857.1|WP_000470624.1|59259_59895_-|serine-recombinase
MFIRAYLRASTEDQFADRAKEMLEQFVQERGHKIASYYRENISGTKLDRPELGRLLMDSHRNDILLVEQIDRLTRLSNSDWMTLKKQIEQHELRIVSLDVPTSWQALSDKDPSQADPITRAVITAINNMLIDLMASMSHKDWLSRRHRQKQGIERAHTLGKYRGKQADQERHKKVLYYRQVKKLSIRETAEATGYSTSQVCRIQALFRPEN
>NZ_CP021857.1|WP_009652884.1|58395_59232_+|S-formylglutathione-hydrolase
MELIEQHASAGGWQNVYRHNSQTLNCGMNFGVYLPPKAATEKLPVLYWLSGLTCTEQNFITKSGMQHYAARNNIIVVVPDTSPRGEHVADADSYDLGQGAGFYLNATEHPWNTHYRMYDYILHELPDVVMEHLPVTSRKSISGHSMGGLGALVLSLRNPDEYVSVSAFSPIVSPSQVPWGQQAFTAYLGENKKTWEHYDPVSLILQGAKLPEIFIDQGLSDAFYEDQLRTKSLERVCNEMNINTSFRYHTGYDHSYYFISSFIGEHIAYHANRLRLSA
>NZ_CP021857.1|WP_000235177.1|57931_58330_+|VOC-family-protein
MATPVISGNDVFSHVFIGASDVEKSADFYDAVLGTLGINNLGPFGNGWVLYGREKPAFIIAHPGNGEAPSANGVTVGFAAASPEEVDAFHAAGLAAGGKDEGQPGPRSHLPGAYAAYLRDPAGNKITAYTFI
>NZ_CP021857.1|WP_022644718.1|68388_69015_+|ParA-family-protein
MGKVISIVGQKGGGSKSTEARTLAVGFSEAGWKTHLADIDTKQQTSLKWTERREKSGLSPIDCALYRRVETAVRMKDSCHLLIIDGRPAAETTSLDVADESDLVIITTGTTIDDLEPSLELARELIKKGIDKSKIVFIVSKSPSQSQGEKAQETIKAWGYKVINTVIPFKTSYGEALDTGRALHETPFKSLNETAKQMIEEIHDIINS
>NZ_CP021857.1|WP_020314634.1|69059_69287_+|hypothetical-protein
MKGPGKSIKIEPPKEDEPTLDVTGKGAVPDSAVKPIQIKVPVSKHKEMKAYAAEQGISMTDMLLAGYDMYRNKMK
>NZ_CP021857.1|WP_020314652.1|69461_70736_-|Y-family-DNA-polymerase
MFALADVNSFYASCEKVFRPDLRDRPVIVLSNNDGCVIARSREARAIGIPMGAPWFKVKGLAEKHNVAVFSSNYSLYHSMSERVMRCLEALAPRVEQYSIDEMFLDVAGIDNCVDFEDFGRQLREYVHRHTALTIGVGMGPSKTLAKSAQWASKEWPQFGGVLALTPDNPRRTEKLLSLQPVEEIWGVGRRISKKLNTMGITTALQLARANPAFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGERITEYDAMRQAVCQYAERAAEKLRSERQYCRHIAVFVKTSPFAVKEPYYGNMASESLPFPSRDSRDIIAAAVRALGRIWVPEHRYAKAGVMLNDFTPAGVSQLSLFDDVQPRANSEALMNVVDGINHSGLGKVWFAGRGIAPDWQMKRDLLSPAYTTRWADIPSARLC
>NZ_CP021857.1|WP_046960466.1|70747_71197_-|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit
MSRREPLFDPEAVFTLPATPSSLQLPLFADACAAGFPSPAGDYVEQELDLNSLCIRHPAATYFLRASGESMKDLGLYDGDILVVDRSETAVDGDVVIAEVDGGFTVKRLRLHPRPALEPMNPAYPTLWPEELTLFGVVMHFIHRTRARL
>NZ_CP021857.1|WP_020314635.1|71193_71439_-|DinI-like-family-protein
MLQISVRFSPEQVKAMRSGTFAALQQEIERRLTPRYPQLWLNIGKSSQTALDVSGARSDKEKSDIMNTLEAIWQDDTWLPE
>NZ_CP021857.1|WP_020314631.1|71642_71873_+|hypothetical-protein
MSPVFRNALRFAGVPVDSSEPVRRQYGSRMIGIVTVCLLPLLVFDVPLWVFVLSQVIWGAGVYIGLSVAGDKSRNR
>NZ_CP021857.1|WP_020314651.1|72307_73009_+|DNA-methylase
MSRFILGNCIDVMRGFPDRAVDLIVTDPPYLVGFKDRSGRSIAGDKTDEWLAPATLEMYRVLKKDALMVSFYGWNRVDRFMAAWKAAGFYAVGQLVFTKTYASNRRNAKDRRGFVDYRHEGAYVLAKGRPVPPLRPLPDVMPFPYTGNPLHPNQKPVEALQPLIESFSAPGAIVLDPFAGSASTCVAAYRAGRRYIGIEMLAQYHRAGTERLAAMHRAVNTPAANDEWLPEVA
>NZ_CP021857.1|WP_020314641.1|73008_73230_+|hypothetical-protein
MNYDGHDALRRDMAGLANNICDLKTTLKVLEDKYHYQHDGLPERLAGVSLRRLNVLMDEAFNIALLLDESFRD
>NZ_CP021857.1|WP_020314645.1|73275_73686_+|DUF1380-domain-containing-protein
MLYGTRKELNKKLKRMFGNEERYALLVWTKEDVLALSGNMTEAEAQTLLELIGRTGTGEHTEEGVSFRTVQALYAGIRPGIPRVSVPVDTLYRITDIAAQAINGEDEHSPSLTVDHYPSVADAQAEIAWLKRELAA
>NZ_CP021857.1|WP_020314640.1|73732_74500_+|hypothetical-protein
MRNDTFNALILRHGDRMLKDAGWPPCVDMMQIAPETMPGWSVATGSLDAAHILALVTHLCLPLTYGRAGLLTASARRLAGTPARLYLYPAKGFMPPEKLADAQTLHLPYAQEWLTAAECDDLLAFLKASLTQIAEIVRLDAHRLAAALKPSVTPRLMDRRFGDWRVLADEYEHENWLDENDTDVLDAVLDAVLVRGASFCPILLTVVNERREEIEAAGVITDMLRFPGDPARRWLDRRVLREVVSEARATPAQTE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP021753	Klebsiella pneumoniae strain AR_0113 plasmid unitig_2, complete sequence	112606-112662	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	CP052165	Klebsiella pneumoniae strain F16KP0082 plasmid pF16KP0082-3, complete sequence	15773-15829	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	CP052160	Klebsiella pneumoniae strain F16KP0084 plasmid pF16KP0084-2, complete sequence	52062-52118	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	CP052145	Klebsiella pneumoniae strain F17KP0012 plasmid pF17KP0012-2, complete sequence	16181-16237	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP008791	Klebsiella oxytoca KONIH1 plasmid pKPC-727, complete sequence	176746-176802	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP025040	Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_3, complete sequence	79461-79517	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP022275	Citrobacter freundii strain 18-1 plasmid pBKPC18-1, complete sequence	61191-61247	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	MN891677	Klebsiella pneumoniae strain ZZ41 plasmid pZZ41-KPC, complete sequence	51326-51382	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	MN891679	Klebsiella pneumoniae strain ZZ40 plasmid pZZ40-KPC, complete sequence	32331-32387	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP027614	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed2, complete sequence	13684-13740	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP022349	Klebsiella michiganensis strain K516 plasmid pK516_KPC, complete sequence	43005-43061	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	KY940546	Klebsiella pneumoniae plasmid pUCLA3, complete sequence	29736-29792	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP021545	Klebsiella pneumoniae strain AR_0112 plasmid tig00000001, complete sequence	79808-79864	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP006922	Klebsiella pneumoniae 30684/NJST258_2 plasmid pNJST258C1, complete sequence	8165-8221	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP020064	Klebsiella pneumoniae strain AR_0117 plasmid unitig_3, complete sequence	75854-75910	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP038275	Raoultella ornithinolytica strain WLK218 plasmid pWLK-101716, complete sequence	99886-99942	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP021857	Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence	68227-68283	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	CP052205	Klebsiella pneumoniae strain F16KP0002 plasmid pF16KP0002-2, complete sequence	105904-105960	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP023186	Klebsiella michiganensis strain K518 plasmid pK518_KPC, complete sequence	22497-22553	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_CP026717	Klebsiella oxytoca strain AR_0028 plasmid unitig_2_pilon, complete sequence	64587-64643	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	NZ_MF788069	Raoultella ornithinolytica strain 23141 plasmid p23141-1, complete sequence	43995-44051	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	MT108213	Klebsiella pneumoniae strain ZZ100 plasmid pZZ100-KPC, complete sequence	30012-30068	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP021753	Klebsiella pneumoniae strain AR_0113 plasmid unitig_2, complete sequence	112685-112733	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	CP052165	Klebsiella pneumoniae strain F16KP0082 plasmid pF16KP0082-3, complete sequence	15702-15750	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	CP052160	Klebsiella pneumoniae strain F16KP0084 plasmid pF16KP0084-2, complete sequence	52141-52189	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	CP052145	Klebsiella pneumoniae strain F17KP0012 plasmid pF17KP0012-2, complete sequence	16260-16308	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP008791	Klebsiella oxytoca KONIH1 plasmid pKPC-727, complete sequence	176825-176873	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP025040	Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_3, complete sequence	79540-79588	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP022275	Citrobacter freundii strain 18-1 plasmid pBKPC18-1, complete sequence	61120-61168	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	MN891677	Klebsiella pneumoniae strain ZZ41 plasmid pZZ41-KPC, complete sequence	51405-51453	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	MN891679	Klebsiella pneumoniae strain ZZ40 plasmid pZZ40-KPC, complete sequence	32260-32308	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP017590	Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ09, complete sequence	107476-107524	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP027614	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed2, complete sequence	13763-13811	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP022349	Klebsiella michiganensis strain K516 plasmid pK516_KPC, complete sequence	43084-43132	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	KY940546	Klebsiella pneumoniae plasmid pUCLA3, complete sequence	29815-29863	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP021545	Klebsiella pneumoniae strain AR_0112 plasmid tig00000001, complete sequence	79887-79935	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP006922	Klebsiella pneumoniae 30684/NJST258_2 plasmid pNJST258C1, complete sequence	8244-8292	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP020064	Klebsiella pneumoniae strain AR_0117 plasmid unitig_3, complete sequence	75783-75831	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP038275	Raoultella ornithinolytica strain WLK218 plasmid pWLK-101716, complete sequence	99815-99863	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	CP050170	Klebsiella pneumoniae plasmid Carbapenemase(KPC-2)_IncFII, complete sequence	27143-27191	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP021857	Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence	68306-68354	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	CP052205	Klebsiella pneumoniae strain F16KP0002 plasmid pF16KP0002-2, complete sequence	105983-106031	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP023186	Klebsiella michiganensis strain K518 plasmid pK518_KPC, complete sequence	22426-22474	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_CP026717	Klebsiella oxytoca strain AR_0028 plasmid unitig_2_pilon, complete sequence	64516-64564	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	NZ_MF788069	Raoultella ornithinolytica strain 23141 plasmid p23141-1, complete sequence	44074-44122	0	1.0
NZ_CP021857_1	1.2\|68312\|49\|NZ_CP021857\|PILER-CR	68312-68360	49	MT108213	Klebsiella pneumoniae strain ZZ100 plasmid pZZ100-KPC, complete sequence	29941-29989	0	1.0
NZ_CP021857_1	1.1\|68232\|57\|NZ_CP021857\|PILER-CR	68232-68288	57	CP050170	Klebsiella pneumoniae plasmid Carbapenemase(KPC-2)_IncFII, complete sequence	27214-27270	1	0.982

1. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP021753 (Klebsiella pneumoniae strain AR_0113 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

2. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to CP052165 (Klebsiella pneumoniae strain F16KP0082 plasmid pF16KP0082-3, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

3. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to CP052160 (Klebsiella pneumoniae strain F16KP0084 plasmid pF16KP0084-2, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

4. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to CP052145 (Klebsiella pneumoniae strain F17KP0012 plasmid pF17KP0012-2, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

5. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP008791 (Klebsiella oxytoca KONIH1 plasmid pKPC-727, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

6. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP025040 (Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_3, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

7. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP022275 (Citrobacter freundii strain 18-1 plasmid pBKPC18-1, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

8. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to MN891677 (Klebsiella pneumoniae strain ZZ41 plasmid pZZ41-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

9. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to MN891679 (Klebsiella pneumoniae strain ZZ40 plasmid pZZ40-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

10. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP027614 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

11. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP022349 (Klebsiella michiganensis strain K516 plasmid pK516_KPC, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

12. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to KY940546 (Klebsiella pneumoniae plasmid pUCLA3, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

13. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP021545 (Klebsiella pneumoniae strain AR_0112 plasmid tig00000001, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

14. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP006922 (Klebsiella pneumoniae 30684/NJST258_2 plasmid pNJST258C1, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

15. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP020064 (Klebsiella pneumoniae strain AR_0117 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

16. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP038275 (Raoultella ornithinolytica strain WLK218 plasmid pWLK-101716, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

17. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP021857 (Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

18. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to CP052205 (Klebsiella pneumoniae strain F16KP0002 plasmid pF16KP0002-2, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

19. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP023186 (Klebsiella michiganensis strain K518 plasmid pK518_KPC, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

20. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_CP026717 (Klebsiella oxytoca strain AR_0028 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

21. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to NZ_MF788069 (Raoultella ornithinolytica strain 23141 plasmid p23141-1, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

22. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to MT108213 (Klebsiella pneumoniae strain ZZ100 plasmid pZZ100-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

23. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP021753 (Klebsiella pneumoniae strain AR_0113 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

24. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to CP052165 (Klebsiella pneumoniae strain F16KP0082 plasmid pF16KP0082-3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

25. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to CP052160 (Klebsiella pneumoniae strain F16KP0084 plasmid pF16KP0084-2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

26. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to CP052145 (Klebsiella pneumoniae strain F17KP0012 plasmid pF17KP0012-2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

27. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP008791 (Klebsiella oxytoca KONIH1 plasmid pKPC-727, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

28. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP025040 (Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

29. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP022275 (Citrobacter freundii strain 18-1 plasmid pBKPC18-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

30. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to MN891677 (Klebsiella pneumoniae strain ZZ41 plasmid pZZ41-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

31. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to MN891679 (Klebsiella pneumoniae strain ZZ40 plasmid pZZ40-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

32. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP017590 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ09, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

33. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP027614 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

34. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP022349 (Klebsiella michiganensis strain K516 plasmid pK516_KPC, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

35. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to KY940546 (Klebsiella pneumoniae plasmid pUCLA3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

36. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP021545 (Klebsiella pneumoniae strain AR_0112 plasmid tig00000001, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

37. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP006922 (Klebsiella pneumoniae 30684/NJST258_2 plasmid pNJST258C1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

38. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP020064 (Klebsiella pneumoniae strain AR_0117 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

39. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP038275 (Raoultella ornithinolytica strain WLK218 plasmid pWLK-101716, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

40. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to CP050170 (Klebsiella pneumoniae plasmid Carbapenemase(KPC-2)_IncFII, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

41. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP021857 (Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

42. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to CP052205 (Klebsiella pneumoniae strain F16KP0002 plasmid pF16KP0002-2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

43. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP023186 (Klebsiella michiganensis strain K518 plasmid pK518_KPC, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

44. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_CP026717 (Klebsiella oxytoca strain AR_0028 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

45. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to NZ_MF788069 (Raoultella ornithinolytica strain 23141 plasmid p23141-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

46. spacer 1.2|68312|49|NZ_CP021857|PILER-CR matches to MT108213 (Klebsiella pneumoniae strain ZZ100 plasmid pZZ100-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

47. spacer 1.1|68232|57|NZ_CP021857|PILER-CR matches to CP050170 (Klebsiella pneumoniae plasmid Carbapenemase(KPC-2)_IncFII, complete sequence) position: , mismatch: 1, identity: 0.982

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
aatttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
 ********************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

21929 : 73009

Escherichia_phage(31.58%)

integrase,transposase

attL 21736:21795|attR 48918:50628

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
21736:21795	attL	NA	NA	NA	NA
WP_000948429.1\|21929_23129_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000957857.1\|23138_23327_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|23982_24687_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_002904004.1\|24823_25684_+	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_002903955.1\|26727_27630_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_000957857.1\|27999_28188_+	hypothetical protein	NA	NA	NA	NA
WP_000948429.1\|28197_29397_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_022644731.1\|30476_31352_+	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	1.9e-82	57.1
WP_004197649.1\|31984_32611_+	ParA family plasmid-partitioning AAA ATPase	A0A222YXS3	Escherichia_phage	2.9e-40	43.6
WP_006788217.1\|32730_32910_+	hypothetical protein	NA	NA	NA	NA
WP_004197635.1\|33357_34152_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.5e-52	88.7
WP_020315256.1\|34349_35366_-	hypothetical protein	NA	NA	NA	NA
WP_022644730.1\|35362_35686_-	hypothetical protein	NA	NA	NA	NA
WP_025380813.1\|35712_36072_-	hypothetical protein	NA	NA	NA	NA
WP_001568026.1\|36276_36582_-	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
WP_001568025.1\|36583_36802_-	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
WP_004193995.1\|37354_38044_+	hypothetical protein	NA	NA	NA	NA
WP_020315560.1\|38075_38765_-	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_020804424.1\|39201_39471_+	hypothetical protein	NA	NA	NA	NA
WP_020317495.1\|39458_40034_+	hypothetical protein	NA	NA	NA	NA
WP_020802777.1\|40064_40559_+	hypothetical protein	NA	NA	NA	NA
WP_004197807.1\|40602_40971_+	hypothetical protein	NA	NA	NA	NA
WP_004197808.1\|41004_41208_+	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_050893391.1\|41284_41464_+	hypothetical protein	NA	NA	NA	NA
WP_000427623.1\|41957_42962_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_015065644.1\|43040_46007_-\|transposase	Tn3-like element ISPa38 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.2
WP_001247892.1\|46081_46372_+	nucleotidyltransferase	NA	NA	NA	NA
WP_001293886.1\|46368_46770_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_000215515.1\|46759_47116_+	cupin domain-containing protein	NA	NA	NA	NA
WP_000957857.1\|47385_47574_+	hypothetical protein	NA	NA	NA	NA
WP_000948429.1\|47583_48783_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001067855.1\|50337_51042_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
48918:50628	attR	NA	NA	NA	NA
WP_001235713.1\|51737_52295_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_022644723.1\|52456_55462_+\|transposase	Tn3-like element Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	99.6
WP_001141270.1\|56474_56750_+	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA
WP_000842086.1\|56780_57890_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	3.7e-30	28.1
WP_000235177.1\|57931_58330_+	VOC family protein	NA	NA	NA	NA
WP_009652884.1\|58395_59232_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_000470624.1\|59259_59895_-	serine recombinase	NA	NA	NA	NA
WP_022644720.1\|60062_63101_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	2.5e-294	53.6
WP_001567660.1\|63124_64147_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_020314648.1\|64606_64885_+	hypothetical protein	NA	NA	NA	NA
WP_020314646.1\|65202_65814_+	DUF2913 family protein	NA	NA	NA	NA
WP_020314639.1\|65810_66764_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	9.5e-75	57.1
WP_022644719.1\|66884_67151_-	hypothetical protein	NA	NA	NA	NA
WP_020314642.1\|67170_67791_-	resolvase	A0A219Y912	Aeromonas_phage	1.0e-08	31.0
WP_022644718.1\|68388_69015_+	ParA family protein	A0A2H4EW66	Aeromonas_phage	4.5e-25	34.4
WP_020314634.1\|69059_69287_+	hypothetical protein	NA	NA	NA	NA
WP_020314652.1\|69461_70736_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	1.3e-148	60.7
WP_046960466.1\|70747_71197_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.3e-31	52.0
WP_020314635.1\|71193_71439_-	DinI-like family protein	Q7Y3V9	Yersinia_phage	1.1e-08	39.3
WP_020314631.1\|71642_71873_+	hypothetical protein	NA	NA	NA	NA
WP_020314651.1\|72307_73009_+	DNA methylase	A0A2K9VH43	Faecalibacterium_phage	6.2e-23	34.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage