CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP021896	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0050 chromosome, complete genome	0 crisprs	csa3,cas3,DEDDh,WYL,DinG	7
NZ_CP021897	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0050 plasmid unitig_2_pilon, complete sequence	0 crisprs	DEDDh	1
NZ_CP021899	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0050 plasmid unitig_4_pilon, complete sequence	0 crisprs	NA	1
NZ_CP021898	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0050 plasmid unitig_3_pilon, complete sequence	0 crisprs	NA	1

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

53236 : 61356

uncultured_Caudovirales_phage(62.5%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004118246.1\|53236_54193_+	Fe(3+) dicitrate ABC transporter permease subunit FecD	A0A2H4IY97	uncultured_Caudovirales_phage	5.3e-17	26.1
WP_022649396.1\|54193_54961_+	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
WP_007898888.1\|55059_55353_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	4.7e-49	95.9
WP_007898884.1\|55683_55962_-	EAL domain-containing protein	NA	NA	NA	NA
WP_007898882.1\|56075_56501_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.9e-51	71.4
WP_007898880.1\|56513_57803_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	4.4e-168	71.1
WP_022649397.1\|57847_58168_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	8.5e-20	44.8
WP_007898876.1\|58253_58952_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	7.7e-90	69.4
WP_004206574.1\|59080_59386_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004206572.1\|59396_60602_-	chromate efflux transporter	NA	NA	NA	NA
WP_016151342.1\|60777_61356_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	5.7e-22	35.5

DBSCAN-SWA_2

1778573 : 1788207

Streptococcus_phage(33.33%)

integrase

attL 1777610:1777623|attR 1788452:1788465

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1777610:1777623	attL	NA	NA	NA	NA
WP_015571369.1\|1778573_1779677_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.0e-59	39.9
WP_022647151.1\|1779688_1780942_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.3e-97	46.6
WP_022647152.1\|1781282_1782455_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.8e-110	49.5
WP_071785223.1\|1782451_1782628_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_022647154.1\|1782636_1784031_-	DEAD/DEAH box helicase	Q3LZN8	Bacteriophage	1.7e-213	73.7
WP_022647155.1\|1784063_1784771_+	hypothetical protein	NA	NA	NA	NA
WP_032621500.1\|1784767_1785043_-	VRR-NUC domain-containing protein	B6SD64	Bacteriophage	2.3e-26	64.7
WP_022647157.1\|1785032_1785254_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_032621498.1\|1785319_1786078_-	DNA-binding protein	NA	NA	NA	NA
WP_022647159.1\|1786134_1788207_-	hypothetical protein	Q775A3	Bordetella_phage	3.1e-272	67.7
1788452:1788465	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1795076 : 1801148

Shigella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022647167.1\|1795076_1796771_+	hypothetical protein	A0A0A6Z575	Enterobacter_phage	1.0e-50	38.4
WP_022647168.1\|1797116_1798577_-	hypothetical protein	NA	NA	NA	NA
WP_022647169.1\|1798569_1799493_-	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	2.4e-155	88.1
WP_022647170.1\|1799489_1799852_-	GtrA family protein	U5P0S6	Shigella_phage	8.7e-29	56.7
WP_022647171.1\|1800038_1800269_+	hypothetical protein	A5LH82	Enterobacteria_phage	2.2e-22	71.0
WP_022647172.1\|1800249_1800789_+	lysozyme	H6WRZ4	Salmonella_phage	9.7e-93	89.9
WP_022647173.1\|1800785_1801148_+	hypothetical protein	R9TPM9	Aeromonas_phage	6.0e-14	46.2

DBSCAN-SWA_4

2879659 : 2886762

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022647975.1\|2879659_2880319_+	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	2.4e-77	62.1
WP_022647976.1\|2880375_2880687_-	YebG family protein	NA	NA	NA	NA
WP_022647977.1\|2880795_2881410_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	2.8e-27	33.7
WP_022647978.1\|2881455_2882310_-	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	5.8e-23	34.6
WP_022647979.1\|2882311_2882929_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	4.0e-74	58.6
WP_022647980.1\|2882939_2885369_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	2.4e-215	49.9
WP_006808860.1\|2885499_2885805_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_022647981.1\|2885907_2886762_-	beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	M1I711	Paramecium_bursaria_Chlorella_virus	3.1e-24	32.5

DBSCAN-SWA_5

2893094 : 2904459

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022647989.1\|2893094_2894558_+	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	1.9e-45	30.3
WP_003857405.1\|2894602_2894806_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	4.4e-14	56.7
WP_022647990.1\|2895093_2895525_+	universal stress protein	A0A1W6JNV4	Morganella_phage	1.5e-16	35.2
WP_003857403.1\|2895560_2896247_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_022647991.1\|2896337_2897084_-	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA
WP_022647992.1\|2897227_2899261_+	peptidyl-dipeptidase Dcp	A0A1V0SIU1	Klosneuvirus	1.1e-19	20.5
WP_071785206.1\|2899875_2900103_-	hypothetical protein	NA	NA	NA	NA
WP_022647994.1\|2900665_2900884_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	8.3e-19	62.7
WP_022647995.1\|2901251_2901941_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	2.2e-81	60.5
WP_006808847.1\|2902203_2902443_-	DinI family protein	K7PKM2	Enterobacterial_phage	1.5e-32	91.1
WP_022647996.1\|2902769_2903189_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	7.2e-35	56.7
WP_032622206.1\|2903190_2904459_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	2.1e-226	90.8

DBSCAN-SWA_6

3883042 : 3925580

Enterobacterial_phage(34.78%)

portal,integrase,tail,holin,terminase,protease

attL 3874712:3874727|attR 3926002:3926017

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3874712:3874727	attL	NA	NA	NA	NA
WP_032623297.1\|3883042_3883363_-	hypothetical protein	K7PGV5	Enterobacterial_phage	2.5e-43	76.4
WP_032623296.1\|3883362_3883602_-	hypothetical protein	K7P7N3	Enterobacteria_phage	2.7e-39	96.2
WP_032623294.1\|3883701_3883968_+	DinI family protein	K7P797	Enterobacteria_phage	1.4e-39	95.5
WP_032623293.1\|3884061_3885345_-	hypothetical protein	K7PHF0	Enterobacteria_phage	1.1e-150	62.1
WP_032622491.1\|3885748_3886426_-	hypothetical protein	K7PGV3	Enterobacterial_phage	1.9e-117	96.9
WP_032623291.1\|3886425_3886728_-	hypothetical protein	K7PJS1	Enterobacterial_phage	1.5e-50	98.0
WP_032623290.1\|3886727_3890201_-	host specificity protein J	M9P0D8	Enterobacteria_phage	0.0e+00	90.3
WP_128755120.1\|3890265_3890745_-	hypothetical protein	M9NZH8	Enterobacteria_phage	1.2e-78	98.7
WP_032623287.1\|3890829_3891447_-\|tail	tail assembly protein	K7PH59	Enterobacterial_phage	8.8e-106	99.0
WP_032623285.1\|3891439_3892159_-	C40 family peptidase	K7PJY5	Enterobacterial_phage	2.0e-141	97.5
WP_016063063.1\|3892161_3892899_-\|tail	phage minor tail protein L	M9NYX1	Enterobacteria_phage	5.5e-147	100.0
WP_001704112.1\|3892953_3893292_-\|tail	tail protein	E4WL34	Enterobacteria_phage	2.3e-60	100.0
WP_032623284.1\|3893288_3896426_-\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	0.0e+00	94.1
WP_071993863.1\|3896409_3896724_-\|tail	phage tail assembly protein T	E4WL32	Enterobacteria_phage	1.4e-51	93.3
WP_032623281.1\|3896732_3897164_-\|tail	phage minor tail protein G	M9NZD7	Enterobacteria_phage	6.0e-69	93.7
WP_032623279.1\|3897174_3897918_-\|tail	phage tail protein	K7PKX6	Enterobacterial_phage	3.9e-132	98.8
WP_001704117.1\|3897927_3898329_-\|tail	tail protein	K7PHM6	Enterobacterial_phage	4.1e-72	100.0
WP_032623278.1\|3898325_3898904_-\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	2.0e-96	99.5
WP_010429892.1\|3898913_3899189_-	DNA breaking-rejoining protein	K7PH55	Enterobacterial_phage	3.2e-39	98.8
WP_010429891.1\|3899181_3899508_-	DUF2190 family protein	K7PJY3	Enterobacterial_phage	7.8e-53	99.1
WP_080688138.1\|3899590_3901606_-\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	99.3
WP_032623277.1\|3901550_3903050_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	9.4e-287	99.2
WP_032623276.1\|3903046_3903262_-	hypothetical protein	K7PMB5	Enterobacterial_phage	7.2e-31	97.2
WP_032623274.1\|3903258_3905361_-\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	98.6
WP_032623273.1\|3905360_3905849_-	DUF1441 family protein	K7PJY2	Enterobacterial_phage	1.1e-79	97.5
WP_032623272.1\|3906063_3906600_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	4.8e-07	52.1
WP_032623271.1\|3906596_3907133_-	lysozyme	K7PM52	Enterobacteria_phage	3.1e-83	81.7
WP_000286102.1\|3907132_3907348_-\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.3e-27	80.3
WP_032623270.1\|3907418_3908471_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	5.2e-175	80.3
WP_016240136.1\|3908621_3908813_-	hypothetical protein	Q8SBE3	Shigella_phage	5.1e-20	79.0
WP_032623269.1\|3909011_3909704_-	antitermination protein	NA	NA	NA	NA
WP_032623268.1\|3909725_3910787_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	9.2e-111	55.4
WP_032623267.1\|3910783_3911476_-	antirepressor	G0ZND1	Cronobacter_phage	1.2e-58	54.2
WP_032623266.1\|3911490_3911877_-	RusA family crossover junction endodeoxyribonuclease	A0A192Y8N5	Salmonella_phage	4.3e-58	87.6
WP_032623264.1\|3911873_3913808_-	DNA methyltransferase	H9C171	Pectobacterium_phage	1.7e-200	53.9
WP_032623420.1\|3913800_3915093_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	4.1e-105	47.6
WP_032623263.1\|3915098_3915962_-	GntR family transcriptional regulator	U5P0A0	Shigella_phage	3.1e-40	85.1
WP_020690687.1\|3915951_3916131_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	8.6e-14	69.2
WP_032623262.1\|3916303_3916852_-	hypothetical protein	A0A1C9II13	Salmonella_phage	3.4e-69	68.7
WP_032623260.1\|3916844_3917108_-	helix-turn-helix transcriptional regulator	A0A0P0ZCZ7	Stx2-converting_phage	1.3e-18	57.5
WP_032623258.1\|3917205_3917901_+	helix-turn-helix domain-containing protein	Q8HAA0	Salmonella_phage	2.7e-87	70.0
WP_023294084.1\|3918619_3918991_+	hypothetical protein	Q8HAA1	Salmonella_phage	2.9e-56	90.2
WP_032623253.1\|3919044_3919875_+	YfdQ family protein	Q8HAA2	Salmonella_phage	1.3e-117	77.5
WP_032623251.1\|3920010_3920550_+	hypothetical protein	A0A192Y8M4	Salmonella_phage	2.7e-74	75.4
WP_032623250.1\|3920537_3920735_+	hypothetical protein	NA	NA	NA	NA
WP_032623249.1\|3920731_3921235_+	hypothetical protein	NA	NA	NA	NA
WP_032623248.1\|3921231_3921459_+	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
WP_032623247.1\|3921458_3921671_+	hypothetical protein	NA	NA	NA	NA
WP_047363402.1\|3922140_3922362_+	hypothetical protein	K7PKM4	Enterobacterial_phage	1.5e-12	59.7
WP_032623246.1\|3922342_3922915_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	9.3e-94	84.0
WP_001515618.1\|3922959_3923169_+	hypothetical protein	NA	NA	NA	NA
WP_032623244.1\|3923171_3924359_+\|integrase	tyrosine-type recombinase/integrase	A0A2D1GN00	Marinobacter_phage	1.9e-32	30.0
WP_006811332.1\|3924607_3924868_-	DUF2534 family protein	NA	NA	NA	NA
WP_032622478.1\|3925070_3925580_+\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
3926002:3926017	attR	NA	NA	NA	NA

DBSCAN-SWA_7

4027166 : 4110130

Enterobacterial_phage(33.93%)

portal,capsid,integrase,tRNA,tail,holin,terminase,protease,head

attL 4059424:4059438|attR 4099084:4099098

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001286071.1\|4027166_4027979_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_022648855.1\|4027978_4028992_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_022648856.1\|4029059_4030196_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	5.2e-19	27.3
WP_022648857.1\|4030307_4031312_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_022648858.1\|4031396_4032575_-	MFS transporter	NA	NA	NA	NA
WP_022648859.1\|4032643_4033861_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_022648860.1\|4034019_4036017_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_022648861.1\|4036082_4036358_-	YfcL family protein	NA	NA	NA	NA
WP_022648862.1\|4036371_4036917_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_022648863.1\|4036916_4037726_-	TSUP family transporter	NA	NA	NA	NA
WP_003861385.1\|4037725_4038550_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_022648864.1\|4038552_4039638_-	chorismate synthase	A0A291AU41	Pandoravirus	3.2e-87	46.6
WP_022648865.1\|4039698_4040631_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_022648866.1\|4040776_4041328_+	endonuclease SmrB	NA	NA	NA	NA
WP_003861375.1\|4041374_4041860_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_022648867.1\|4042069_4044217_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_022648868.1\|4044216_4045527_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_022648869.1\|4045764_4046049_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_022648870.1\|4046421_4047705_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_022648871.1\|4047749_4048502_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_022648872.1\|4048816_4049746_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	4.8e-140	83.6
WP_022648873.1\|4050006_4050273_+	DinI family protein	K7PKM2	Enterobacterial_phage	1.6e-40	96.6
WP_022648874.1\|4050367_4051657_-	hypothetical protein	K7PHF0	Enterobacteria_phage	2.5e-147	63.3
WP_022648876.1\|4052060_4052738_-	hypothetical protein	K7PGV3	Enterobacterial_phage	6.0e-116	96.4
WP_022648877.1\|4052737_4053040_-	hypothetical protein	K7PJS1	Enterobacterial_phage	1.3e-49	97.0
WP_022648878.1\|4053039_4056591_-	DUF1983 domain-containing protein	Q9MCU0	Escherichia_phage	0.0e+00	71.4
WP_022648879.1\|4056643_4057228_-\|tail	tail assembly protein	A0A1P8DTG7	Proteus_phage	1.9e-54	52.6
WP_022648880.1\|4057227_4057938_-	C40 family peptidase	F1C573	Cronobacter_phage	1.5e-96	69.8
WP_022648881.1\|4057940_4058699_-\|tail	phage minor tail protein L	A0A1W6JNX9	Morganella_phage	2.3e-95	63.6
WP_022648882.1\|4058695_4059034_-\|tail	phage tail protein	K7PKL8	Enterobacterial_phage	7.3e-38	59.8
WP_032627366.1\|4059036_4062528_-\|tail	phage tail tape measure protein	A0A2H4JHR1	uncultured_Caudovirales_phage	0.0e+00	84.8
4059424:4059438	attL	NA	NA	NA	NA
WP_022648884.1\|4062574_4062910_-	hypothetical protein	S4TR42	Salmonella_phage	3.4e-51	92.8
WP_032619858.1\|4062965_4063244_-	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	1.8e-42	95.7
WP_001549114.1\|4063252_4063636_-\|tail	phage tail protein	K7PKV6	Enterobacterial_phage	4.4e-63	93.7
WP_006809155.1\|4063644_4064088_-	hypothetical protein	K7PHL2	Enterobacterial_phage	4.6e-72	93.8
WP_022648886.1\|4064147_4064495_-	DUF3168 domain-containing protein	Q9MCS8	Enterobacteria_phage	3.8e-58	99.1
WP_022648887.1\|4064491_4064941_-	HK97 gp10 family phage protein	K7P6X4	Enterobacteria_phage	2.9e-74	98.7
WP_022648888.1\|4064937_4065276_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	6.0e-40	73.2
WP_022648889.1\|4065284_4065611_-\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.3e-47	81.5
WP_022648890.1\|4065653_4066865_-\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	1.7e-193	85.5
WP_022648891.1\|4066874_4067723_-\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	3.7e-139	92.9
WP_032627363.1\|4067736_4069041_-\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	2.1e-234	93.8
WP_022648893.1\|4069040_4070777_-\|terminase	terminase large subunit	K7PKT2	Enterobacteria_phage	0.0e+00	99.7
WP_022648894.1\|4070776_4071274_-\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	1.6e-73	85.5
WP_032619870.1\|4071431_4071782_-	HNH endonuclease	K7PHK9	Enterobacteria_phage	1.2e-51	81.9
WP_022648895.1\|4071781_4072375_-	hypothetical protein	S4TR53	Salmonella_phage	3.7e-93	81.6
WP_022648896.1\|4072356_4073814_-	glycosyltransferase family 2 protein	K7PKP3	Enterobacterial_phage	4.6e-270	90.9
WP_022648897.1\|4073831_4074299_-	hypothetical protein	K7PH02	Enterobacteria_phage	9.4e-76	91.6
WP_022648762.1\|4074526_4074715_-	hypothetical protein	A0A2I7RUD6	Vibrio_phage	1.2e-18	78.7
WP_048228039.1\|4074857_4075052_-	hypothetical protein	K7PM01	Enterobacterial_phage	4.3e-19	95.6
WP_022648898.1\|4075002_4075281_-	hypothetical protein	K7PGW4	Enterobacterial_phage	1.2e-06	100.0
WP_022648899.1\|4075277_4075502_-	hypothetical protein	NA	NA	NA	NA
WP_022648900.1\|4075498_4076128_-	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	1.5e-100	87.1
WP_022648766.1\|4076127_4076409_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	4.1e-42	93.5
WP_022648767.1\|4076395_4076791_-	phage membrane protein	K7PHB9	Enterobacterial_phage	9.1e-64	99.2
WP_022648901.1\|4076946_4077525_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	2.8e-45	52.8
WP_032622304.1\|4077537_4078527_-	DUF968 domain-containing protein	K7PJS6	Enterobacterial_phage	1.9e-179	89.7
WP_022648903.1\|4078523_4079249_-	hypothetical protein	G0ZND1	Cronobacter_phage	6.4e-55	52.7
WP_022648904.1\|4079264_4079654_-	RusA family crossover junction endodeoxyribonuclease	K7PKN5	Enterobacterial_phage	1.2e-65	95.2
WP_022648905.1\|4079650_4079971_-	hypothetical protein	K7PHB4	Enterobacterial_phage	7.6e-45	79.2
WP_022648906.1\|4079967_4080195_-	hypothetical protein	NA	NA	NA	NA
WP_022648907.1\|4080191_4080851_-	adenine-specific DNA methyltransferase	I6PDF5	Cronobacter_phage	2.9e-99	81.3
WP_022648908.1\|4080850_4081345_-	hypothetical protein	NA	NA	NA	NA
WP_022648909.1\|4081341_4082268_-	hypothetical protein	K7PLZ7	Enterobacterial_phage	5.8e-69	56.7
WP_071785216.1\|4082224_4082437_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	4.6e-14	69.2
WP_022648911.1\|4082677_4083148_-	hypothetical protein	K7PJS5	Enterobacterial_phage	1.4e-74	92.9
WP_016530206.1\|4083173_4083371_-	hypothetical protein	H9C161	Pectobacterium_phage	2.7e-16	66.1
WP_032623415.1\|4083475_4084123_+	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	6.4e-75	63.0
WP_022648914.1\|4084584_4085043_-	hypothetical protein	NA	NA	NA	NA
WP_022648915.1\|4085569_4085890_+	hypothetical protein	K7P7N6	Enterobacteria_phage	3.6e-26	55.7
WP_032623413.1\|4085938_4086352_+	hypothetical protein	K7PJS4	Enterobacterial_phage	1.1e-56	87.6
WP_022648917.1\|4086351_4087374_+	hypothetical protein	K7PKM7	Enterobacterial_phage	2.3e-167	89.8
WP_022648918.1\|4087360_4087882_+	hypothetical protein	K7PJQ4	Enterobacteria_phage	4.4e-50	83.1
WP_022648919.1\|4087883_4088126_+	hypothetical protein	NA	NA	NA	NA
WP_080396514.1\|4088645_4089083_+	DUF550 domain-containing protein	K7PGV7	Enterobacterial_phage	1.2e-48	78.0
WP_063132000.1\|4089140_4089350_+	hypothetical protein	G3CFG7	Escherichia_phage	4.5e-14	59.6
WP_022648923.1\|4089333_4090503_-\|integrase	site-specific integrase	A0A2R2Z2Y0	Escherichia_phage	4.0e-200	84.6
WP_161177175.1\|4090967_4091939_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	2.0e-75	54.3
WP_099458937.1\|4092298_4092370_+	membrane protein YpdK	NA	NA	NA	NA
WP_022648925.1\|4092427_4093663_-	alanine transaminase	NA	NA	NA	NA
WP_022648926.1\|4094049_4095747_+	sensor histidine kinase	NA	NA	NA	NA
WP_022648927.1\|4095760_4096492_+	response regulator transcription factor	A0A2R2ZGH8	Clostridioides_phage	8.5e-15	25.1
WP_022648928.1\|4096527_4097493_-	glucokinase	NA	NA	NA	NA
WP_022648929.1\|4097698_4098934_+	ion channel protein	NA	NA	NA	NA
WP_022648930.1\|4098934_4100593_-	indolepyruvate decarboxylase	NA	NA	NA	NA
4099084:4099098	attR	NA	NA	NA	NA
WP_022648931.1\|4100779_4101778_+	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA
WP_022648932.1\|4101904_4102252_+	DUF2502 domain-containing protein	NA	NA	NA	NA
WP_022648933.1\|4102285_4103524_-	Mn(2+) uptake NRAMP transporter MntH	NA	NA	NA	NA
WP_022648934.1\|4103869_4105057_+	nucleoside permease NupC	NA	NA	NA	NA
WP_022648935.1\|4105102_4107292_-	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
WP_022648936.1\|4107912_4108275_+	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_022648937.1\|4108297_4108663_+	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_022648938.1\|4108714_4110130_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP021897

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 112381

129

Salmonella_phage(90.43%)

tail,integrase,transposase,terminase

attL 142:159|attR 88172:88189

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
142:159	attL	NA	NA	NA	NA
WP_016051633.1\|222_546_+	hypothetical protein	J9Q6E7	Salmonella_phage	1.9e-51	100.0
WP_022649957.1\|558_1251_+	hypothetical protein	J9Q7Y7	Salmonella_phage	2.9e-129	99.6
WP_016051635.1\|1252_1504_+	hypothetical protein	J9Q7R6	Salmonella_phage	6.6e-36	100.0
WP_016051638.1\|1852_2275_+	hypothetical protein	J9Q6E9	Salmonella_phage	5.7e-72	100.0
WP_032623541.1\|2307_3009_+	hypothetical protein	J9Q7Y8	Salmonella_phage	5.4e-136	99.6
WP_022649960.1\|3163_3829_+	AAA family ATPase	J9Q7R7	Salmonella_phage	1.4e-117	99.5
WP_161496783.1\|3834_4188_+	hypothetical protein	J9Q7G3	Salmonella_phage	2.9e-45	100.0
WP_022649962.1\|4233_4992_+	DUF2971 domain-containing protein	J9Q7Y9	Salmonella_phage	8.7e-148	98.4
WP_022649963.1\|5188_5914_+	hypothetical protein	J9Q7R8	Salmonella_phage	2.6e-141	99.6
WP_006812582.1\|5974_7315_+	AAA family ATPase	J9Q7G4	Salmonella_phage	1.3e-247	99.8
WP_022649964.1\|7473_8589_+	hypothetical protein	J9Q720	Salmonella_phage	1.4e-215	97.6
WP_022649965.1\|8669_9464_+	hypothetical protein	J9Q7Z0	Salmonella_phage	9.8e-142	97.0
WP_032623539.1\|9764_10022_+	hypothetical protein	J9Q7R9	Salmonella_phage	4.0e-36	97.6
WP_022649967.1\|10056_11379_+	hypothetical protein	J9Q7G5	Salmonella_phage	2.4e-257	99.1
WP_022649968.1\|11538_11751_+	hypothetical protein	J9Q6I3	Salmonella_phage	5.8e-33	98.6
WP_000613550.1\|11750_11903_+	hypothetical protein	J9Q7Z1	Salmonella_phage	8.9e-20	98.0
WP_004110169.1\|11899_12205_+	hypothetical protein	J9Q7S1	Salmonella_phage	1.4e-48	99.0
WP_003100847.1\|13482_14040_-	recombinase family protein	A0A0C4UR34	Shigella_phage	3.3e-59	63.2
WP_003100853.1\|14033_14405_-	hypothetical protein	NA	NA	NA	NA
WP_003100856.1\|14401_14902_-	hypothetical protein	NA	NA	NA	NA
WP_003100858.1\|14898_15225_-	hypothetical protein	NA	NA	NA	NA
WP_003465043.1\|15479_15836_-	cupin domain-containing protein	NA	NA	NA	NA
WP_000845048.1\|16290_17304_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001355915.1\|17460_17934_+	trimethoprim-resistant dihydrofolate reductase DfrA15	G3MBI7	Bacillus_virus	6.9e-18	30.8
WP_000679427.1\|18134_18482_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|18475_19315_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000376623.1\|19442_19943_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001389365.1\|20449_21214_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_022649889.1\|22329_23103_+	phosphate starvation-inducible protein PhoH	W8D063	Erwinia_phage	4.7e-88	63.6
WP_022649890.1\|23113_23317_+	hypothetical protein	A0A2P1CDD4	Klebsiella_phage	5.6e-09	50.7
WP_006812571.1\|23332_23698_+	hypothetical protein	K7PH35	Enterobacteria_phage	5.1e-37	66.4
WP_006812570.1\|23697_23943_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.0e-12	44.9
WP_006812569.1\|24039_24564_+	hypothetical protein	NA	NA	NA	NA
WP_006812568.1\|24554_24971_+	hypothetical protein	NA	NA	NA	NA
WP_022649891.1\|25142_26249_+\|integrase	site-specific integrase	A0A1P8DTG6	Proteus_phage	2.8e-25	32.2
WP_022649892.1\|26240_26627_-	transcriptional regulator	NA	NA	NA	NA
WP_004110118.1\|26890_27103_+	hypothetical protein	NA	NA	NA	NA
WP_022649893.1\|27212_29585_+	hypothetical protein	J9Q7G6	Salmonella_phage	0.0e+00	93.7
WP_022649894.1\|29681_30917_+	AAA domain-containing protein	J9Q733	Salmonella_phage	6.0e-239	99.8
WP_022649895.1\|31097_33461_+	DNA polymerase III subunit alpha	J9Q7Z2	Salmonella_phage	0.0e+00	93.4
WP_022649896.1\|33463_34159_+	hypothetical protein	S5YLC4	Mycobacterium_phage	1.9e-19	36.5
WP_022649897.1\|34180_35350_+	hypothetical protein	J9Q7Z2	Salmonella_phage	1.3e-211	95.1
WP_161496785.1\|35364_35790_+	hypothetical protein	J9Q7S4	Salmonella_phage	3.7e-71	99.3
WP_022649899.1\|35828_36473_-	hypothetical protein	NA	NA	NA	NA
WP_022649900.1\|36538_37096_-	hypothetical protein	J9Q7G7	Salmonella_phage	8.9e-65	70.9
WP_071785233.1\|37177_37402_-	hypothetical protein	NA	NA	NA	NA
WP_022649901.1\|37659_38091_+	hypothetical protein	J9Q6I8	Salmonella_phage	4.4e-72	99.3
WP_004110098.1\|38210_39239_+	hypothetical protein	J9Q7Z3	Salmonella_phage	1.3e-165	99.7
WP_022649902.1\|39299_40244_+	hypothetical protein	J9Q7S6	Salmonella_phage	4.0e-182	99.7
WP_000920226.1\|40243_40510_+	hypothetical protein	J9Q7G8	Salmonella_phage	1.6e-40	100.0
WP_022649903.1\|40512_42855_+	intein-containing recombinase RecA	J9Q736	Salmonella_phage	6.0e-30	87.8
WP_022649904.1\|43005_43377_+	DUF2591 domain-containing protein	J9Q7S7	Salmonella_phage	3.0e-69	98.4
WP_004110040.1\|43360_43771_+	hypothetical protein	J9Q7G9	Salmonella_phage	1.1e-75	97.8
WP_022649905.1\|43839_44115_+	hypothetical protein	J9Q738	Salmonella_phage	5.4e-47	96.7
WP_022649906.1\|44155_44335_+	hypothetical protein	J9Q6J1	Salmonella_phage	9.5e-21	96.6
WP_022649907.1\|44331_44667_+	hypothetical protein	J9Q7Z5	Salmonella_phage	4.2e-54	95.5
WP_006812558.1\|44666_44879_+	hypothetical protein	J9Q7S8	Salmonella_phage	3.1e-34	98.6
WP_016051671.1\|45488_46553_-	replication protein RepA	J9Q7H0	Salmonella_phage	1.5e-190	100.0
WP_022649908.1\|47297_47942_+	hypothetical protein	J9Q739	Salmonella_phage	2.2e-123	99.1
WP_022649909.1\|48017_48512_+	GNAT family N-acetyltransferase	J9Q6J3	Salmonella_phage	7.8e-89	98.2
WP_022649910.1\|48687_49773_+	hypothetical protein	J9Q7S9	Salmonella_phage	1.0e-205	98.6
WP_022649911.1\|50002_51919_+	AAA family ATPase	J9Q741	Salmonella_phage	0.0e+00	98.9
WP_004110014.1\|51908_52655_+	hypothetical protein	J9Q6J5	Salmonella_phage	2.6e-136	98.8
WP_022649912.1\|52666_53236_+	hypothetical protein	J9Q7Z7	Salmonella_phage	8.4e-103	98.9
WP_022649913.1\|53313_55629_+	ribonucleoside-diphosphate reductase subunit alpha	J9Q7T0	Salmonella_phage	0.0e+00	99.7
WP_002231164.1\|55736_56879_+	ribonucleotide-diphosphate reductase subunit beta	J9Q7H3	Salmonella_phage	1.7e-219	100.0
WP_022649914.1\|56961_57831_+	hypothetical protein	J9Q742	Salmonella_phage	3.9e-160	98.3
WP_022649915.1\|58020_59124_+	thymidylate synthase	J9Q6J6	Salmonella_phage	1.1e-218	99.2
WP_160859100.1\|59143_59539_+	hypothetical protein	J9Q7Z8	Salmonella_phage	3.9e-67	96.9
WP_161496782.1\|59541_60012_+	dihydrofolate reductase	J9Q7T1	Salmonella_phage	1.3e-88	99.4
WP_000386471.1\|60011_60656_+	AAA family ATPase	J9Q7H4	Salmonella_phage	5.2e-117	100.0
WP_004109992.1\|60719_61139_+	hypothetical protein	J9Q743	Salmonella_phage	6.4e-68	97.8
WP_022649917.1\|61148_61706_+	3'-5' exonuclease	J9Q6J8	Salmonella_phage	2.0e-101	98.9
WP_022649918.1\|61834_62677_+	hypothetical protein	J9Q7Z9	Salmonella_phage	2.9e-107	85.0
WP_022649919.1\|62862_63456_+	phage N-6-adenine-methyltransferase	J9Q7T2	Salmonella_phage	1.0e-111	99.0
WP_000262979.1\|63658_63889_+	hypothetical protein	J9Q7H5	Salmonella_phage	2.1e-36	100.0
WP_022649920.1\|64482_65091_+	ribonuclease HI	J9Q745	Salmonella_phage	4.9e-117	99.0
WP_022649921.1\|65233_65728_+	hypothetical protein	J9Q6J9	Salmonella_phage	8.7e-80	97.0
WP_000872126.1\|65737_65926_+	hypothetical protein	J9Q800	Salmonella_phage	1.2e-26	100.0
WP_000462606.1\|66034_66877_+	hypothetical protein	J9Q7T3	Salmonella_phage	2.1e-70	71.1
WP_022649922.1\|66985_67558_+	hypothetical protein	J9Q7H6	Salmonella_phage	5.3e-97	97.9
WP_022649923.1\|67699_69385_+	DUF4942 domain-containing protein	J9Q747	Salmonella_phage	0.0e+00	99.1
WP_022649925.1\|70344_71043_+	DUF1311 domain-containing protein	J9Q6K3	Salmonella_phage	4.8e-124	99.1
WP_022649926.1\|71098_71302_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	5.2e-31	97.0
WP_022649927.1\|71489_71756_+	hypothetical protein	J9Q7T5	Salmonella_phage	3.7e-29	69.3
WP_022649928.1\|71840_72158_+	hypothetical protein	J9Q750	Salmonella_phage	5.2e-46	80.0
WP_022649929.1\|72239_73076_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_022649930.1\|73159_73678_+	hypothetical protein	NA	NA	NA	NA
WP_022649931.1\|75104_75347_-	hypothetical protein	J9Q751	Salmonella_phage	3.4e-37	93.8
WP_161496784.1\|75578_75794_+	hypothetical protein	J9Q804	Salmonella_phage	2.6e-33	94.4
WP_022649933.1\|75934_76246_+	hypothetical protein	J9Q7T7	Salmonella_phage	1.6e-47	97.1
WP_022649934.1\|76373_76769_+	hypothetical protein	J9Q7I1	Salmonella_phage	3.3e-66	99.2
WP_161496780.1\|76980_77178_+	hypothetical protein	J9Q753	Salmonella_phage	5.0e-31	96.9
WP_022649937.1\|77383_77866_+	hypothetical protein	J9Q805	Salmonella_phage	5.1e-85	95.0
WP_016051712.1\|78510_78714_-	hypothetical protein	J9Q7I3	Salmonella_phage	1.3e-29	100.0
WP_022649938.1\|78764_79415_-	hypothetical protein	J9Q754	Salmonella_phage	1.2e-113	99.1
WP_006812523.1\|79738_80266_-	transcriptional regulator	J9Q6L0	Salmonella_phage	2.6e-82	99.3
WP_032623531.1\|80270_80693_-	hypothetical protein	J9Q806	Salmonella_phage	2.4e-62	85.0
WP_001291547.1\|80752_81031_-	hypothetical protein	J9Q7T9	Salmonella_phage	3.4e-41	98.9
WP_022649940.1\|81033_82593_-	DEAD/DEAH box helicase	J9Q7I4	Salmonella_phage	1.3e-294	99.4
WP_032623529.1\|82657_83356_+	ParB N-terminal domain-containing protein	J9Q756	Salmonella_phage	3.6e-124	98.7
WP_000164561.1\|83355_84024_+	ParB N-terminal domain-containing protein	J9Q6L1	Salmonella_phage	1.1e-114	99.5
WP_006812519.1\|84020_84659_+	ATP-binding cassette domain-containing protein	J9Q807	Salmonella_phage	1.1e-111	99.5
WP_022649942.1\|84651_84906_+	hypothetical protein	J9Q7U0	Salmonella_phage	9.0e-41	97.6
WP_002211789.1\|84911_85802_+	hypothetical protein	J9Q7I6	Salmonella_phage	6.2e-169	99.7
WP_000176291.1\|85811_86078_+	hypothetical protein	J9Q757	Salmonella_phage	1.3e-42	100.0
WP_022649943.1\|86273_86915_+	hypothetical protein	J9Q6D4	Salmonella_phage	5.2e-109	99.1
WP_002211787.1\|86917_88174_+\|terminase	terminase	J9Q7Y2	Salmonella_phage	1.8e-251	100.0
WP_022649944.1\|88207_89782_+	hypothetical protein	J9Q7R1	Salmonella_phage	7.1e-301	99.2
88172:88189	attR	NA	NA	NA	NA
WP_022649945.1\|89804_90698_+	hypothetical protein	J9Q7F4	Salmonella_phage	1.2e-135	92.3
WP_001130336.1\|90724_91600_+	hypothetical protein	J9Q710	Salmonella_phage	3.8e-163	100.0
WP_000801184.1\|91903_92338_+	hypothetical protein	J9Q7Y3	Salmonella_phage	2.1e-74	100.0
WP_022649947.1\|92337_93171_+	hypothetical protein	J9Q7R2	Salmonella_phage	9.3e-151	98.6
WP_001027662.1\|93268_93613_+	hypothetical protein	J9Q7F6	Salmonella_phage	1.9e-57	100.0
WP_022649948.1\|93603_94077_+	hypothetical protein	J9Q711	Salmonella_phage	6.8e-82	99.4
WP_000469441.1\|94078_94462_+	hypothetical protein	J9Q6D8	Salmonella_phage	1.7e-67	100.0
WP_022649949.1\|94536_95283_+	Ig domain-containing protein	J9Q7Y4	Salmonella_phage	2.0e-128	98.0
WP_000163862.1\|95342_95660_+	hypothetical protein	J9Q7R3	Salmonella_phage	6.0e-50	98.1
WP_000952684.1\|95785_96010_+	hypothetical protein	J9Q7F7	Salmonella_phage	4.2e-34	100.0
WP_022649950.1\|96017_100589_+	tape measure protein	J9Q712	Salmonella_phage	0.0e+00	90.5
WP_016051623.1\|100630_100966_+\|tail	phage tail protein	J9Q6E1	Salmonella_phage	1.4e-60	100.0
WP_016051624.1\|101055_101754_+\|tail	phage minor tail protein L	J9Q7Y5	Salmonella_phage	3.7e-137	100.0
WP_022649951.1\|101746_102544_+	hypothetical protein	J9Q7R4	Salmonella_phage	1.2e-160	99.2
WP_016051626.1\|102531_103122_+\|tail	tail assembly protein	J9Q7F8	Salmonella_phage	2.1e-109	100.0
WP_022649952.1\|103139_107297_+	DUF1983 domain-containing protein	J9Q713	Salmonella_phage	0.0e+00	99.6
WP_022649953.1\|107384_110939_+	hypothetical protein	J9Q6E3	Salmonella_phage	2.0e-250	64.4
WP_022649954.1\|110938_111475_+	hypothetical protein	J9Q7Y6	Salmonella_phage	1.0e-94	98.9
WP_022649955.1\|111518_111773_+	hypothetical protein	J9Q7R5	Salmonella_phage	2.4e-41	95.2
WP_022649956.1\|111772_112381_+	hypothetical protein	J9Q7G0	Salmonella_phage	1.4e-103	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP021898

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

14326 : 21348

Escherichia_phage(33.33%)

integrase

attL 9840:9853|attR 30623:30636

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
9840:9853	attL	NA	NA	NA	NA
WP_022650030.1\|14326_15019_-	DNA methylase	A0A2K9VH43	Faecalibacterium_phage	5.7e-29	36.7
WP_022650031.1\|15415_15883_-	hypothetical protein	NA	NA	NA	NA
WP_080332517.1\|15860_16118_-	DUF1472 domain-containing protein	NA	NA	NA	NA
WP_022650032.1\|16248_16677_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.3e-28	51.6
WP_022650033.1\|16676_17948_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	2.9e-156	63.7
WP_022650034.1\|17951_18341_-	hypothetical protein	NA	NA	NA	NA
WP_022650035.1\|18345_19317_-	hypothetical protein	A0A222YXF2	Escherichia_phage	2.2e-66	42.9
WP_022650036.1\|19553_20192_+	AAA family ATPase	A0A222YXS3	Escherichia_phage	5.8e-44	44.9
WP_022650037.1\|20191_20470_+	hypothetical protein	NA	NA	NA	NA
WP_022650038.1\|20568_21348_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	3.5e-51	89.3
30623:30636	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP021899

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5308 : 58960

Salmonella_phage(19.05%)

transposase,integrase,protease

attL 29259:29318|attR 53653:53854

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000948429.1\|5308_6508_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000957857.1\|6517_6706_-	hypothetical protein	NA	NA	NA	NA
WP_000018330.1\|7062_7878_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	4.3e-161	98.9
WP_000027057.1\|8360_9221_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001217881.1\|9403_9961_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.0e-93	98.4
WP_004152397.1\|13369_14689_+\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
WP_015062847.1\|14938_15820_-	carbapenem-hydrolyzing class A beta-lactamase KPC-4	A0A1B0VBP7	Salmonella_phage	1.1e-74	52.5
WP_004152394.1\|16206_16986_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_004199214.1\|16982_18008_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152392.1\|18114_21144_-\|transposase	IS3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004152391.1\|21253_22969_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_022650072.1\|23968_24601_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.0e-77	67.2
WP_000376623.1\|25107_25608_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000259031.1\|25735_26575_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000679427.1\|26568_26916_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_015243636.1\|27088_27421_-	quaternary ammonium compound efflux SMR transporter QacF	NA	NA	NA	NA
WP_010792467.1\|27631_28096_-	aminoglycoside N-acetyltransferase AAC(3)-Ib	NA	NA	NA	NA
WP_000845048.1\|28244_29258_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
29259:29318	attL	NA	NA	NA	NA
WP_001323888.1\|30348_30516_-	hypothetical protein	A0A1B0V7I9	Salmonella_phage	2.3e-24	98.2
WP_001161490.1\|30504_31065_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	1.1e-59	100.0
WP_001138014.1\|31068_34035_+\|transposase	Tn3-like element TnAs1 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	100.0
WP_000731968.1\|34104_34638_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	2.0e-21	34.5
WP_000128596.1\|34637_35633_-	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_000101712.1\|35674_36835_-	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_000735067.1\|36834_37719_-	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA
WP_000646594.1\|37729_38428_-	type IV secretion system protein	NA	NA	NA	NA
WP_000886022.1\|38646_39687_-	type IV secretion system protein	NA	NA	NA	NA
WP_000734973.1\|39702_39930_-	IncN-type entry exclusion lipoprotein EexN	NA	NA	NA	NA
WP_000749362.1\|39937_40651_-	hypothetical protein	NA	NA	NA	NA
WP_001200711.1\|40668_43269_-	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA
WP_000496058.1\|43268_43586_-	hypothetical protein	NA	NA	NA	NA
WP_001749962.1\|43635_43929_-	hypothetical protein	NA	NA	NA	NA
WP_000440698.1\|43938_44220_-	hypothetical protein	NA	NA	NA	NA
WP_001749963.1\|44228_44963_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_024129965.1\|45026_45377_+	H-NS histone family protein	NA	NA	NA	NA
WP_001749964.1\|45392_45737_+	hypothetical protein	NA	NA	NA	NA
WP_001749965.1\|45733_46048_+	KikA protein	NA	NA	NA	NA
WP_001452736.1\|46083_46395_+	hypothetical protein	NA	NA	NA	NA
WP_001749966.1\|46450_47092_+	restriction endonuclease	NA	NA	NA	NA
WP_001749967.1\|47096_47303_+	hypothetical protein	NA	NA	NA	NA
WP_072094655.1\|47703_49107_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	9.0e-106	50.6
WP_004098817.1\|49140_50355_-	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_001389365.1\|50615_51380_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001144737.1\|51522_51789_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_004201280.1\|52009_52483_-	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
WP_000845048.1\|52638_53652_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001749988.1\|54044_54614_+	recombinase family protein	E5FFF9	Burkholderia_phage	5.2e-36	43.2
53653:53854	attR	NA	NA	NA	NA
WP_001749982.1\|56533_57253_-	replication initiation protein	I3WF20	Macacine_betaherpesvirus	8.6e-20	28.9
WP_000057569.1\|57812_58154_+	hypothetical protein	NA	NA	NA	NA
WP_001452808.1\|58168_58960_-\|protease	zinc metalloprotease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP021896

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP021897

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP021898

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP021899

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection