CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022000	Pseudomonas aeruginosa strain Pa127 chromosome, complete genome	4 crisprs	csa3,DEDDh,cas3,WYL,PD-DExK,DinG	0	1	14	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022000_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022000_1

475816-475929

Orphan

Consensus_repeat	Method
GGCCAAAGAACTGGAGGGCAAGGTATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022000_1

>merge|NZ_CP022000|1|475816-475929|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGAGCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGTGGCCAAAGAACTGGAGGGCAAGGTATGA

>NZ_CP022000|1|1|475816-475929|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGA	GCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGT
GGCCAAAGAACTGGAGGGCAAGGTATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022000.1\|WP_003084339.1\|485598_486291_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP022000.1\|WP_003111119.1\|462664_463543_-\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NZ_CP022000.1\|WP_023095099.1\|472628_473726_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP022000.1\|WP_003084327.1\|484279_484834_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_003084290.1\|468196_469555_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP022000.1\|WP_003112938.1\|467403_468156_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NZ_CP022000.1\|WP_003118764.1\|483559_484258_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226274
NZ_CP022000.1\|WP_023095100.1\|476972_479360_-\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|225241
NZ_CP022000.1\|WP_003084297.1\|469620_470991_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NZ_CP022000.1\|WP_003084273.1\|464431_465493_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP022000.1\|WP_003084303.1\|473780_474935_+\|polyamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183226
NZ_CP022000.1\|WP_023095102.1\|481109_481721_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239267
NZ_CP022000.1\|WP_003084333.1\|485099_485594_+\|DUF523-domain-containing-protein	unknown	unknown	gnl\|CDD\|224597
NZ_CP022000.1\|WP_012613483.1\|481719_482739_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP022000.1\|WP_003110707.1\|482758_483511_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_003112937.1\|465748_467125_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP022000.1\|WP_003110710.1\|480501_481005_-\|transcriptional-regulator	unknown	unknown	unknown
NZ_CP022000.1\|WP_023095101.1\|479470_480523_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP022000.1\|WP_003084299.1\|471106_472210_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP022000.1\|WP_003128566.1\|463705_464371_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228

Protein	Function_ID	Function_description	E-value
NZ_CP022000.1\|WP_003111119.1\|462664_463543_-\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP022000.1\|WP_023095099.1\|472628_473726_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP022000.1\|WP_003084339.1\|485598_486291_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.29364e-79
NZ_CP022000.1\|WP_003084290.1\|468196_469555_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.71424e-158
NZ_CP022000.1\|WP_003112938.1\|467403_468156_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	1.81471e-108
NZ_CP022000.1\|WP_003118764.1\|483559_484258_+\|hypothetical-protein	gnl\|CDD\|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	2.81845e-78
NZ_CP022000.1\|WP_023095100.1\|476972_479360_-\|penicillin-acylase-family-protein	gnl\|CDD\|225241	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only].	0
NZ_CP022000.1\|WP_003084297.1\|469620_470991_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NZ_CP022000.1\|WP_003084273.1\|464431_465493_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.13028e-163
NZ_CP022000.1\|WP_003084303.1\|473780_474935_+\|polyamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183226	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG.	0
NZ_CP022000.1\|WP_023095102.1\|481109_481721_-\|hypothetical-protein	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	0.0067766
NZ_CP022000.1\|WP_003084333.1\|485099_485594_+\|DUF523-domain-containing-protein	gnl\|CDD\|224597	COG1683, COG1683, Uncharacterized conserved protein [Function unknown].	1.65548e-66
NZ_CP022000.1\|WP_012613483.1\|481719_482739_+\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	4.26652e-56
NZ_CP022000.1\|WP_003112937.1\|465748_467125_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.09186e-161
NZ_CP022000.1\|WP_023095101.1\|479470_480523_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	3.71146e-31
NZ_CP022000.1\|WP_003084299.1\|471106_472210_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP022000.1\|WP_003128566.1\|463705_464371_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.54006e-09

>NZ_CP022000.1|WP_003084303.1|473780_474935_+|polyamine-ABC-transporter-ATP-binding-protein
MAIASGAYKKALEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGVLVEDVQDHAVIACPQLENPIYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGHNWAQGTVYDIAYLGGHSVYYIKLASGMIVQAFMANAERHVARPTWDQSVYISWYDDSGVVLQS
>NZ_CP022000.1|WP_023095099.1|472628_473726_+|polyamine-ABC-transporter-substrate-binding-protein
MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANVIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIKTGK
>NZ_CP022000.1|WP_003084299.1|471106_472210_+|polyamine-ABC-transporter-substrate-binding-protein
MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK
>NZ_CP022000.1|WP_003084297.1|469620_470991_+|aspartate-aminotransferase-family-protein
MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEGVYIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVELAKAIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGSTVAGVSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEVGEENVAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFGSQYYGNAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAVALENIRILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKTRERFTDKGVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQTAAAVLA
>NZ_CP022000.1|WP_003084290.1|468196_469555_+|glutamine-synthetase
MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAEKGMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVIHDTFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGRSGRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHGDALDLADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIFSNADGTMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPDSSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERRNLRLPLTIEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLLSV
>NZ_CP022000.1|WP_003112938.1|467403_468156_+|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVVNGAGGLPLIIPALGESIDQAALLDSVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAAIDAGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHVQPGGVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGVQWHPEWQVLTNPNYLAIFQAFGKACSKRAGQR
>NZ_CP022000.1|WP_003112937.1|465748_467125_-|glutamine-synthetase
MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERNSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
>NZ_CP022000.1|WP_003084273.1|464431_465493_-|polyamine-ABC-transporter-substrate-binding-protein
MPRLSVLLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRSHLDRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSERYIADLEGGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPASAQHPRQAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH
>NZ_CP022000.1|WP_003128566.1|463705_464371_-|TetR/AcrR-family-transcriptional-regulator
MQPTSSTRKPRASSQARIAAILDAARGLLANEGIGGLTIYSVAERAEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVDHAGLRCWRDLSRIVEERMLAVYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIFSLAMELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLTGFISDLNR
>NZ_CP022000.1|WP_003111119.1|462664_463543_-|N-carbamoylputrescine-amidase
MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPESARSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADPFGEKVEELNRTEEGILVHTFDLDALERTRSAWGVFRDRRPNLYGPLKTLDGSLES
>NZ_CP022000.1|WP_023095100.1|476972_479360_-|penicillin-acylase-family-protein
MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLALAHLQAPVDVRYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGPKLVDTDRLFRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPAPLEFDLLGIPRRPFTPEDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGALGAGDWKDLGTLARISQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAPAVWYEAQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLVAEKVNPDNPNQVWYQGKWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWAFLETENPVLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKRPEGVNPSFILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYYNLADRGQWLDTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGKRLVEQLAAWNGDYPVDSTAATLFNQLLFQIAESALHDELGDAFFDSLIATRAIDSALPRLAGDADSPWWDDRRTERRETRADIVRAAWNASLAHLRGTLGNDPSGWLWGKAHTLTHEHALGQQALLKRLLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPTHSLGINPVGQSGVPFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR
>NZ_CP022000.1|WP_023095101.1|479470_480523_+|AraC-family-transcriptional-regulator
MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPLPPPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEEALRSFVRFQHILSGGFAARLEVKGETARLILDINYLGYASLRQQIECLMLLFLKLLALISDDEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSVALLRRPSRNANPDMHGVLTRHAEEQTRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALAAGGASFRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQYRARLAKREEGYSTSGT
>NZ_CP022000.1|WP_003110710.1|480501_481005_-|transcriptional-regulator
MSLRPTLALLALVSLPLMAAQNDPQPSSKELMKEHQAQIQNDLADVDYKRKRIVEANMNLTDQEGEKFWPIYNTYRTESDKLSKETLRLLLDYAQAYNSGNVSDDQASKLIERVDDLQEDRLELRDKYVKRIAKNVSPKRAMRFLQIEIQLDAIATLEIGRQVPLVE
>NZ_CP022000.1|WP_023095102.1|481109_481721_-|hypothetical-protein
MASLAPVFRVNAMTPRRKTLLVSLVGLLWAGGLLAAYWWFEIRYIRPFSEQTTLFSGDSLRLPAELAGPGAIRLVHFWDPACPCNVGNQQHLGELIERFAGKGVEFHVLQKPGSQGRLPDNLAALRPLAGLPGSEQLPASPAVAIWNRDGRLAYFGPYSEGAVCTSSNSFIEPILEALLQGRPVDATHTLAVGCYCPWPPEKG
>NZ_CP022000.1|WP_012613483.1|481719_482739_+|alpha/beta-hydrolase
MCSRAAEYPWVSPVARPRIDCSPEPPMSEAFNPDYLRQHLRPLAAAEADAAVLAYQAYYGLDLRSRHPRLQARLGSMAVDGRRLAVQAWLLPEARGSLLLMHGYYDHMGLYRHVVDWALGMGFSVLACDLPGHGLSEGERASIRDFAEYQAVFEGLLGQAAELDLAAPWHLCGQSTGGAILLDYLLHGGERPELGETILLAPLVRPRAWGWSKLSYRLLSPFVDSIPRRFSENSSDPQFLDFLREHDPLQPRTLPTAWVGALTRWVPRIERAPRRALSPLVVQGESDETVDWRHGLKVLREKFDEPRILLLEEARHHLANESEGLRRRYFDFLSDALGA
>NZ_CP022000.1|WP_003110707.1|482758_483511_-|hypothetical-protein
MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAAQKRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRKVVAAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVAADSLSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDTELTQYVNFAESPAGRSYYQAALAALKAGLAVDQAVAH
>NZ_CP022000.1|WP_003118764.1|483559_484258_+|hypothetical-protein
MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQGWSHQSIFMPERLTTRLAEECRTRAVAGDLTPAAIGRGDGQVIREGIRGDLTQWLEPGESEACDEYLGVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVSAVLYLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVVFMSAGTEHEVLPASRDRLSLTGWFRRRNESLLQLS
>NZ_CP022000.1|WP_003084327.1|484279_484834_-|hypothetical-protein
MLPTRSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGQAGISLRLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLPIFGVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIGDNSIGRIELRDITDLRGTIKVWGH
>NZ_CP022000.1|WP_003084333.1|485099_485594_+|DUF523-domain-containing-protein
MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEVAGGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRMAVLKARSPSCGNLENYDGRFNGSRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGLDAGG
>NZ_CP022000.1|WP_003084339.1|485598_486291_-|amino-acid-ABC-transporter-permease
MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR

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Crispr_ID: NZ_CP022000_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022000_2

5347772-5347879

Orphan

Consensus_repeat	Method
CGGGTGCAACCGTTGCACCCCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022000_2

>merge|NZ_CP022000|2|5347772-5347879|CRISPRCasFinder
CGGGTGCAACCGTTGCACCCCGTTGTGTCGTCAGTTGCACCCCGTTACGTCGTGGTTTGCACCCCGTTACGTCGTCATTTGCACCCGGTGCAACCGTTGCACCCCGTT

>NZ_CP022000|2|2|5347772-5347879|CRISPRCasFinder
CGGGTGCAACCGTTGCACCCCGTT	GTGTCGTCAGTTGCACCCCGTTACGTCGTGGTTTGCACCCCGTTACGTCGTCATTTGCAC
CCGGTGCAACCGTTGCACCCCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022000.1\|WP_019396628.1\|5350236_5350587_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_019486502.1\|5341972_5342215_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_003085732.1\|5343241_5343772_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378235
NZ_CP022000.1\|WP_087930998.1\|5344300_5344858_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_033944552.1\|5349656_5349965_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_023103672.1\|5340765_5341509_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_125176724.1\|5350967_5351396_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_033944544.1\|5345135_5346533_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274672
NZ_CP022000.1\|WP_010791994.1\|5350774_5350996_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_019396627.1\|5349961_5350240_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_004353177.1\|5342825_5343158_-\|phage-holin,-lambda-family	unknown	unknown	gnl\|CDD\|368287
NZ_CP022000.1\|WP_003123991.1\|5349155_5349389_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_003085702.1\|5351690_5352476_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP022000.1\|WP_052150979.1\|5346529_5347150_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|236153
NZ_CP022000.1\|WP_023835928.1\|5344854_5345139_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_087930999.1\|5348388_5349159_-\|phage-antirepressor-protein	unknown	unknown	gnl\|CDD\|378235
NZ_CP022000.1\|WP_087930996.1\|5341505_5341976_-\|lysis-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_087930997.1\|5342211_5342829_-\|glycoside-hydrolase-family-19-protein	unknown	unknown	gnl\|CDD\|225720
NZ_CP022000.1\|WP_023124259.1\|5348161_5348392_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_079389863.1\|5349381_5349573_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP022000.1\|WP_052150979.1\|5346529_5347150_-\|AAA-family-ATPase	gnl\|CDD\|236153	PRK08116, PRK08116, hypothetical protein; Validated.	1.31821e-33
NZ_CP022000.1\|WP_003085732.1\|5343241_5343772_-\|hypothetical-protein	gnl\|CDD\|378235	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha). Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that Rha is a phage regulatory protein.	3.54663e-31
NZ_CP022000.1\|WP_087930999.1\|5348388_5349159_-\|phage-antirepressor-protein	gnl\|CDD\|378235	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha). Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that Rha is a phage regulatory protein.	3.1298e-08
NZ_CP022000.1\|WP_033944544.1\|5345135_5346533_-\|AAA-family-ATPase	gnl\|CDD\|274672	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. [Mobile and extrachromosomal element functions, Prophage functions].	3.4025e-118
NZ_CP022000.1\|WP_087930997.1\|5342211_5342829_-\|glycoside-hydrolase-family-19-protein	gnl\|CDD\|225720	COG3179, COG3179, Predicted chitinase [General function prediction only].	1.2579e-69
NZ_CP022000.1\|WP_003085702.1\|5351690_5352476_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	5.69556e-30
NZ_CP022000.1\|WP_004353177.1\|5342825_5343158_-\|phage-holin,-lambda-family	gnl\|CDD\|368287	pfam05106, Phage_holin_3_1, Phage holin family (Lysis protein S). This family represents one of a large number of mutually dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda.	1.40947e-34

>NZ_CP022000.1|WP_052150979.1|5346529_5347150_-|AAA-family-ATPase
MALAEKTQRKINELLVGSGIPARYRVSTFETYRTDGKAEKAAVLEACREYAERFVENFQDGRCLLLLGNLGTGKTHLACSIVQYVVRNLQAQAVITSASEIIRVAKGAMNRAAKYTERDALEELAGFDLLVIDELGAQSGTEYELGLLHEVIDRRYREMRPTVVVSNMSAQEVAKYIGDRAVDRLRENGGKAVGFTWGSARREVLE
>NZ_CP022000.1|WP_033944544.1|5345135_5346533_-|AAA-family-ATPase
MSRELYSEEAEFGVLGAILQSALQQNQALVDEALSSVTAADFYFEDNAALFQAIKDCYEEGIPVDPVTVGVVRDVLPSGAKLIPYAGNIARNVPSVANWRTYVRHVRERAILRCLIDTAESVKASATDDRPLPEIIARAQQAMADLRDLDDEAPKYKRLDEVMLKAVDVIDDKFNGRAPQWPSTGLADLDKLVRGIRPRKLTVIAGLPGSGKTTLALQIAQYNACEAGEPWLVFSLEMPEEELGVRSIASLGGVDLKRLDDPQQLGDDDWPRITSAVAKAKGAPLFICDDPNVTASQIRSIARRVKREHGLAGIVVDYLGLIPPEAKGRTRSEEVGRTNKALLRLAKELGVPVIELAQLNRDSTKRPGKRPQSSDLRDSGEIEADASCILMVHRDMDSEAGQNGITEILMTKCRHAPPGMCLLQQQGMYGRFVNFAGSREMSQEEIEMGRSYFANKHGKKKGKAA
>NZ_CP022000.1|WP_023835928.1|5344854_5345139_-|hypothetical-protein
MSNVQPMAPRKVMTRLEREFLKVVGQELAQVKVGGAAALAALLVMIANWHGDRGTLGFHDYGRLWLLDGNAKGAAVETLLRDLFGLNGTPKGAA
>NZ_CP022000.1|WP_087930998.1|5344300_5344858_-|hypothetical-protein
MTGVYRDVMPAIVRVLAADAIDNTARMNWNRLIDRKVDGGFRALLSAQDQFEFDCILHALLHRELSPGEWDVLHARYSTHFDRRGQAIERLASRVHSPAPSRFLERAVATWAIPMMKGKDGKRSTAIPMLPKKWYDMNNWDEDARPDSTRNRWRRDIRKQLDRFEEEALVHVTEILDREKLLDAA
>NZ_CP022000.1|WP_003085732.1|5343241_5343772_-|hypothetical-protein
MSEIDLDEASLRDLVMVNDGQVVTTSLKVAERFGKRHDNVLRAIDNLDCSAGFRLLNFEETVMWRENPSGGEPIKSRSFDMTKDGFMFLVMGFRGKAAAAWKEAFIHAFNWMAEQLFKRSMDFNTMRNELMAEYRQERGIASLAGKTLRRWQIRAPVIEQKIIEIEREGQLQLFHA
>NZ_CP022000.1|WP_004353177.1|5342825_5343158_-|phage-holin,-lambda-family
MKMPERPETWAALLAWLSAHYPQLYAAGLSFVVALTRVIYGGGTRRQALLEATLCTLITLGLIPVLEWFGLPQNMATAAGVFTGFLGVKKIAEFADRIADWKFPRRGAGE
>NZ_CP022000.1|WP_087930997.1|5342211_5342829_-|glycoside-hydrolase-family-19-protein
MKITADQLDRATGCGAATATTWLEHLNGAMARFEINTPERVAMFLAQVGHESQSLKRLVENLNYSAEGLLKTWPTRFTPAEAKQYARKPERIANRVYANRMGNGSPDTGDGYRYRGRGLIMITGHDNYAEAARALALPLVAQPELLEQRTWAAIAAGWFWQSRGLNDLADQGRFEKITLRINGSFTGAEDRNARLEWARAALKGE
>NZ_CP022000.1|WP_019486502.1|5341972_5342215_-|hypothetical-protein
MMLGFTTKAEARQLGVSHHGSYYGIPMWLGDVDSDCPLAFAKWAPLEMVVSLLSVIEGIVNSMLDQEPTFMFKVGRRIDQ
>NZ_CP022000.1|WP_087930996.1|5341505_5341976_-|lysis-protein
MTWRPWLVVTLVAALVLWRLDHVTAQRDDLQAAVEQSAETITAMAQQAQRDIQAQVQTDALARTYQAALQASHEENQLRRDAIGTGARVVYVKARCPADGVHQAPGASGSADAGRAVLAAADGQVVSDLRAGVERRELMIAALRKHIAGLPRYCRR
>NZ_CP022000.1|WP_023103672.1|5340765_5341509_-|hypothetical-protein
MISIKPEGFQQQLADLTELEQRQIPYATATALTRTAQGLMDRLRDEMRVVFDRPTPYTLNSLRMVPARKDRLEARVWFKDEADGAQPASVWIAPEVYGGPRRNKPAELQLRAKGILPEGKYVVPGAGADLDRYGNIKRGQVTRALSGIRGFSQAGYNANATDSRRSRAKGNARRYFVMTRKGQPIGIAERTGRGRDAVSIIMAFVSRPSYRRRLSFFEIAQQYADENLPREFEEAMRGVAARFAARR
>NZ_CP022000.1|WP_023124259.1|5348161_5348392_-|hypothetical-protein
MTTQPKPGRITTSPNGRPVIAGPWPSYRQFRDLPERERWVLYGHAKACRGALEDQGFLMAEGYHDFVKRVTEELDI
>NZ_CP022000.1|WP_087930999.1|5348388_5349159_-|phage-antirepressor-protein
MTDLAPFGGQAATMTSREIADLVEARHNDVVTTIERLFDKGLLRSSRKTRRESTGGRPIAVYDLIERDTHLVVAGYSDEHRARVIDRWQQLEAERTGRDYQIPRTRAEALRLAADLEEQNAVLQLENQHQAETISSLESLFMVGETPTQFCKRLNGVNCAKVNSTLCQLGWLFNEQREEEGAPRYRVASRVRDKYLTERPRKIAPEGGDSFIKYDLQLLLAGAHRLHQLYMQQKLVMKATWDGRFTQAKYTGETIQ
>NZ_CP022000.1|WP_003123991.1|5349155_5349389_-|hypothetical-protein
MTSRIGAKALGDQLYSYIGAIQDLATAVREDLAFEGFELGPRLTAEQVDAIHLSIITIARLAGEDLIQLLTEMEVPA
>NZ_CP022000.1|WP_079389863.1|5349381_5349573_-|hypothetical-protein
MDDIDADLALDSAVGLLDAIQGGLLDILDEPSVSRRVALLLHAAETATALVRAALEGGEVSND
>NZ_CP022000.1|WP_033944552.1|5349656_5349965_-|hypothetical-protein
MNLATLLSNQCSPVPDEVLTDKQIRSIKLDRGTARHAAQNMALGVAAVGKLLALTSAEGEIGQETAERLGWFLEEVGGAIFQLAEFEQVCSERINRQKEAQQ
>NZ_CP022000.1|WP_019396627.1|5349961_5350240_-|hypothetical-protein
MSAVWNKPQSSALKAPISQLPPRRFAAINPTTTVEEALSEAIALTLSVSSILGALTTSDEEHACLYALEIAAEMAGDLVDAALDSLREEGQQ
>NZ_CP022000.1|WP_019396628.1|5350236_5350587_-|hypothetical-protein
MQQKTQSAQVPCAVTTDHQVCFDPLNGDEFLFSIVADRPVDAALAAAEDISEAVHLILLRMTRAMDDAGEPLLSQELNTLALLGAMSGALLRACRAGVATQSGNPESVSRHAGGAA
>NZ_CP022000.1|WP_010791994.1|5350774_5350996_+|hypothetical-protein
MTDAAEERIPTIDLQSLLDTLNALPKDTRVGFSGLTFYRVKWRGQTMVNIEFSEHVHRNSKGEVVVEAPGPEN
>NZ_CP022000.1|WP_125176724.1|5350967_5351396_+|hypothetical-protein
MLKLLGQRTDLPNRFIKWHRAVGRIVPSAHPARNDDEAILAKLKNDRRPDGTAELGSLLQHDLSIPLQVIRQQQIHSKVNAQITLNIQPEEASHLRKESHGATSALDACTAASAHCPRRESDGRMGSRSAELVGTSYRSGLN
>NZ_CP022000.1|WP_003085702.1|5351690_5352476_+|helix-turn-helix-transcriptional-regulator
MIDISTIRRTNALSLAEKEGGTGAFASRIDREPTQVSRLIGSNPTKNIGNKLARHIEECFDLPRGWLDVLHGKHIFEAPHFQAKAVSPLPSADADADAERDLMPLSTWEEGDPLDLDEVEIPYFDEIQVAAGGGRFPDLELAKRKIRFPRSVLHESGVNPKCAVCVNVTGNSMEPLIADGAVIGIDMSVNAITDGEIYALKHDDLLRVKFVYRLPGGGIRLRSYNRDEYPDEEYTRDQMRAGDISVIGWVFWWSVMRRRRH

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Crispr_ID: NZ_CP022000_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022000_3

5595469-5595568

Orphan

Consensus_repeat	Method
CCCCGCTAACCCAACGTGGTGTACGGCGAATAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022000_3

>merge|NZ_CP022000|3|5595469-5595568|CRISPRCasFinder
CCCCGCTAACCCAACGTGGTGTACGGCGAATAACGCCTATGGCGTTATCCGCCCTACGGACCGGCGCCCCGCTAACCCAACGTGGTGTAGGGCGAATAAC

>NZ_CP022000|3|3|5595469-5595568|CRISPRCasFinder
CCCCGCTAACCCAACGTGGTGTACGGCGAATAAC	GCCTATGGCGTTATCCGCCCTACGGACCGGCG
CCCCGCTAACCCAACGTGGTGTAGGGCGAATAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022000.1\|WP_003101143.1\|5602820_5603432_-\|DUF2846-domain-containing-protein	unknown	unknown	gnl\|CDD\|378537
NZ_CP022000.1\|WP_003141220.1\|5585473_5587045_+\|DUF4129-domain-containing-protein	unknown	unknown	gnl\|CDD\|379261
NZ_CP022000.1\|WP_019485779.1\|5602132_5602717_-\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153243
NZ_CP022000.1\|WP_003093937.1\|5597387_5598515_-\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP022000.1\|WP_003093942.1\|5601803_5602112_-\|ribbon-helix-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226771
NZ_CP022000.1\|WP_003093924.1\|5592075_5592882_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274513
NZ_CP022000.1\|WP_003093926.1\|5592966_5593881_+\|universal-stress-protein-A	unknown	unknown	gnl\|CDD\|236871
NZ_CP022000.1\|WP_003116189.1\|5598792_5600316_+\|fumarate-hydratase	unknown	unknown	gnl\|CDD\|224862
NZ_CP022000.1\|WP_023096090.1\|5596468_5597395_-\|iron-sulfur-binding-ferredoxin-reductase	unknown	unknown	gnl\|CDD\|235575
NZ_CP022000.1\|WP_073646363.1\|5600412_5601720_-\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|234815
NZ_CP022000.1\|WP_023096089.1\|5587041_5588319_+\|DUF4350-domain-containing-protein	unknown	unknown	gnl\|CDD\|379527
NZ_CP022000.1\|WP_003141222.1\|5588315_5589323_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP022000.1\|WP_003093932.1\|5595629_5596403_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|235852
NZ_CP022000.1\|WP_003093901.1\|5591075_5591498_-\|DUF4124-domain-containing-protein	unknown	unknown	gnl\|CDD\|379230
NZ_CP022000.1\|WP_003141224.1\|5591598_5591982_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_003141226.1\|5593963_5595415_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NZ_CP022000.1\|WP_003110040.1\|5589319_5590651_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP022000.1\|WP_003120863.1\|5604905_5605985_-\|phosphatidylserine/phosphatidylglycerophosphate/-cardiolipin-synthase-family-protein	unknown	unknown	gnl\|CDD\|224419
NZ_CP022000.1\|WP_023096091.1\|5603525_5604806_-\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NZ_CP022000.1\|WP_003093898.1\|5590655_5591015_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274060

Protein	Function_ID	Function_description	E-value
NZ_CP022000.1\|WP_003101143.1\|5602820_5603432_-\|DUF2846-domain-containing-protein	gnl\|CDD\|378537	pfam11008, DUF2846, Protein of unknown function (DUF2846). Some members in this family of proteins with unknown function are annotated as lipoproteins however this cannot be confirmed.	1.20717e-26
NZ_CP022000.1\|WP_003141220.1\|5585473_5587045_+\|DUF4129-domain-containing-protein	gnl\|CDD\|379261	pfam13559, DUF4129, Domain of unknown function (DUF4129). This presumed domain is found at the C-terminus of proteins that contain a transglutaminase core domain. The function of this domain is unknown. The domain has a conserved TXXE motif.	0.00172176
NZ_CP022000.1\|WP_019485779.1\|5602132_5602717_-\|DJ-1/PfpI-family-protein	gnl\|CDD\|153243	cd03169, GATase1_PfpI_1, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	8.08845e-111
NZ_CP022000.1\|WP_003093937.1\|5597387_5598515_-\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.89838e-61
NZ_CP022000.1\|WP_003093942.1\|5601803_5602112_-\|ribbon-helix-helix-domain-containing-protein	gnl\|CDD\|226771	COG4321, COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis [General function prediction only].	5.41035e-40
NZ_CP022000.1\|WP_003093924.1\|5592075_5592882_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|274513	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). [Protein fate, Protein and peptide secretion and trafficking].	2.08959e-05
NZ_CP022000.1\|WP_003093926.1\|5592966_5593881_+\|universal-stress-protein-A	gnl\|CDD\|236871	PRK11175, PRK11175, universal stress protein UspE; Provisional.	1.35277e-40
NZ_CP022000.1\|WP_003116189.1\|5598792_5600316_+\|fumarate-hydratase	gnl\|CDD\|224862	COG1951, TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion].	1.05118e-147
NZ_CP022000.1\|WP_073646363.1\|5600412_5601720_-\|divalent-metal-cation-transporter	gnl\|CDD\|234815	PRK00701, PRK00701, divalent metal cation transporter MntH.	0
NZ_CP022000.1\|WP_023096089.1\|5587041_5588319_+\|DUF4350-domain-containing-protein	gnl\|CDD\|379527	pfam14258, DUF4350, Domain of unknown function (DUF4350). This domain family is found in bacteria, archaea and eukaryotes, and is approximately 70 amino acids in length.	1.89806e-10
NZ_CP022000.1\|WP_003141222.1\|5588315_5589323_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	3.28278e-100
NZ_CP022000.1\|WP_003093932.1\|5595629_5596403_-\|enoyl-CoA-hydratase	gnl\|CDD\|235852	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional.	6.08309e-90
NZ_CP022000.1\|WP_003093901.1\|5591075_5591498_-\|DUF4124-domain-containing-protein	gnl\|CDD\|379230	pfam13511, DUF4124, Domain of unknown function (DUF4124). This presumed domain is found in a variety of bacterial proteins. It is found associated at the N-terminus associated with other domains such as the SLT domain and glutaredoxin domains in some proteins. The function of this domain is unknown, but it may have an Ig-like fold.	3.21933e-10
NZ_CP022000.1\|WP_023096090.1\|5596468_5597395_-\|iron-sulfur-binding-ferredoxin-reductase	gnl\|CDD\|235575	PRK05713, PRK05713, iron-sulfur-binding ferredoxin reductase.	0
NZ_CP022000.1\|WP_003141226.1\|5593963_5595415_+\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NZ_CP022000.1\|WP_003110040.1\|5589319_5590651_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.11353e-86
NZ_CP022000.1\|WP_003120863.1\|5604905_5605985_-\|phosphatidylserine/phosphatidylglycerophosphate/-cardiolipin-synthase-family-protein	gnl\|CDD\|224419	COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism].	8.25583e-83
NZ_CP022000.1\|WP_023096091.1\|5603525_5604806_-\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	1.33638e-33
NZ_CP022000.1\|WP_003093898.1\|5590655_5591015_-\|hypothetical-protein	gnl\|CDD\|274060	TIGR02266, gmx_TIGR02266, Myxococcus xanthus paralogous domain TIGR02266. This domain is related to Type IV pilus assembly protein PilZ (pfam07238). It is found in at least 12 copies in Myxococcus xanthus DK 1622.	0.00176063

>NZ_CP022000.1|WP_003141226.1|5593963_5595415_+|pyruvate-kinase
MSVRRTKIVATLGPASNSPEVLEQLILAGIDVARLNFSHGTPDEHRARARLVRELAAKHGRFVALLGDLQGPKIRIAKFANKRIELQVGDKFRFSTSHARDAGTQEVVGIDYPDLVKDCGVGDELLLDDGRVVMVVEEVAADELRCRVLIGGPLSDHKGINRRGGGLTAPALTDKDKADIKLAADMDLDYVAVSFPRDAKDMEYARRLLTEAGGKAWLVAKIERAEAVADDDALDGLIRASDAVMVARGDLGVEIGDAELVGIQKKIILHARRNNKVVITATQMMESMIHSPMPTRAEVSDVANAVLDYTDAVMLSAESAAGEYPVEAVQAMARVCQGAEKHPTSQKSSHRLGQTFDRCDESIALASMYTANHFPGIKAIICLTESGFTPLIMSRIRSSVPIYAYSPHRETQARVAMFRGVETIPFDPAALPAEKVSQAAVDELLKRGVVTKGDWVILTKGDSYTAQGGTNTMKVLHVGDLLV
>NZ_CP022000.1|WP_003093926.1|5592966_5593881_+|universal-stress-protein-A
MNLHNLLVVVDPSSDEQPALTRAQWIAERSGASVELLLCDFNPALDGGLFFDSHSLQRARDLYLDERVTWLEQLSMPLQQAGIRTQVEAQWGKPLDRMVLQRVGETRPDLVLKSTRKHNLLRRLLLGNSDWQLIRHCPQPLWLVHHDAWRGQRLCAALDPLHASDKPAALDHRLIAAARQLEASLGLRADYLHTHAAMPRSLLFDAEMLAGYERFVLQHEERHRQAFDDLLAAYPEIAAERRHLLAGYAEQAIPDFVRANDIDLLLMGAVARGHLDNALIGQTAERVLEEVECDLLVLKPTNDI
>NZ_CP022000.1|WP_003093924.1|5592075_5592882_+|tetratricopeptide-repeat-protein
MRFARRLVLLPLLSLLAACSPTTPLFVAQVTTGEVAEYKQMKSNRMTAAIEEEGDLLTYSAMAIRDNRSAEAEKLYLTGYDNSRYSAEVRGISLYQIGLIYMSRYNDQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQRAREPVQKSARELLATWKPQQNLDLYKTSLDPDMTLLSRRAVLKDRVDEAAELYLLAVNDPAIPAGIKEKALYQLGLMYLAPDNPHPNRDKAIEYLRRQLLDYPEGELSNKASRHLDQALNVQPR
>NZ_CP022000.1|WP_003141224.1|5591598_5591982_-|hypothetical-protein
MPMRSLIVACLALSATGCNSWSLNSDLNGAYRAYDKGDCAQVMLDLSRAERRIRARPYLQPEISLLRGQCLERQSLFVDAAQTYHFIIARYPTSEYAYRAKARLETLRQLGRLNETPASASAVPTRL
>NZ_CP022000.1|WP_003093901.1|5591075_5591498_-|DUF4124-domain-containing-protein
MRALWFCVALMPVLAQADIYRWTDAQGKVHFSATPPAGAQRVEVRPQVVERDAATRQREQRTQEYFDARREERTAAAERAGQRQAALAEECGRLRQQLSQLERGGRFYRQDAGGGPVYLSDAELDAIRRELASRESERCR
>NZ_CP022000.1|WP_003093898.1|5590655_5591015_-|hypothetical-protein
MGLQRHIQRHQLPSYLKVFNRITDKPMGYIGNVSEDGLLLISQLPMLVGARFELRLKVPGLGGRPQCIDFSADCRWTCEDVTPGHFDSGFHLLAPPAEFLELVEALRRYFSFPRQPQSV
>NZ_CP022000.1|WP_003110040.1|5589319_5590651_+|DUF58-domain-containing-protein
MKPSRALLALFAALLLLAIGLGSLSALGQRLPAQLHTFWWAALAALLLLGLLDALWARRQAVPKLSRQLSGNLPLGRWSEVRLHLQHTYRRPVRLTLFDHLPAGMDFEYLPQEVELRPGESTEVGYRVRPLNRGHFVFPRCELELPSPLRLWRQRRYLEARGETRVYPDFARLYGAELMAVDHWLNQIGVRGGQRRGLGLEFHQLREFRDGDTLRQIDWKATARKRTPIAREYQDERDQQILFLLDCGRRMRSQDGDLSHFDHALNASLLLAYVALRQGDAVGAMTFAGDDRRHLPPGKGSAQLGALLNTVYDLQTSQRPADFPEAVQAVLSRQRRRALVILVTNLRDEDDEELLGAVKRLGRQHRVLVASLREEVLDTLRQEPVARYEQALAYTGTIDYLNARNGLHEKLAAHGVPVLDARPSELGPELISRYLGWKRAGVL
>NZ_CP022000.1|WP_003141222.1|5588315_5589323_+|MoxR-family-ATPase
MSEQTPEQPSTTPNPALQRQRASQLAQALRSELQKALIGQGAVIDDVLTALLAGGHVLVEGVPGLGKTLLVRALARCFDGGFARIQFTPDLMPSDVTGHAVYDLASEQFKLRKGPVFTHLLLADEINRAPAKTQAALLEVMQERQVTLEGRALPVPQPFMVLATQNPIEQEGTYPLPEAELDRFMLKLRIDYPAEAEEQTLVRQVTRSARSDMLDVANLRPLLKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGEFVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV
>NZ_CP022000.1|WP_023096089.1|5587041_5588319_+|DUF4350-domain-containing-protein
MMSRRARFLLLAVLLLLAGLLAIFLASRLQPYTETIDLGPSPEARRNPYLAAELFLRKQGVTVSRADGLEVLKELPPSGHTLLLLGSRSGMTPGQARRLLQWSEQGGHLVLIAERLWDEDEKKSGDLLLDSLDIRQYLTEDFDDSQDRASEETADADADADEGSVDDHAAEAPPEEAAGEEEEPADSVPDYSALTRLYLENERSPAYIGFDPDYHLYDPQNHAYAWANSGDATHLLQMQHGKGLVTVLTDAWIWQNRNIEQYDNAWLLWYLTQDNQVTLLYRAERDSLATLLARHFPEALAAALLLLLAGLWRAGLRQGPLQPVASRSRRQLEEHLRAGADFLLRQRGHVALLHGLQRDILRRARRRHPGFEQLGVAEQWQILGRMTRLPPSAISQAMRPYPAQRLSAADFTRQVAHLQSLRNAL
>NZ_CP022000.1|WP_003141220.1|5585473_5587045_+|DUF4129-domain-containing-protein
MRLTDASVAIRPRSAWEALDLGILLAHRHARLLMGSWALLTLPLFAVLSLLLWQHPTLAILIFWWLKPAFERLPLYILSHALFGDTPTLKQALRAYPALLRKQLPASLLWRRFSPTRSFDLPVLQLEGLAGEPRSQRLIVLSQRNAGGATWLTVVGVHLEMALWAGFAMLLYLLIPAQNEIDWNWQSLLDPEAGEWLWLEHLSNLLYVLVLVVWEPIYVACGFTLYLNRRTELEAWDIELVFRRLRQRLVGSAYVLLLGLAASLAWLPAPSAYAEPAAAASAGDAELPPEQARLLRQKLNSEQAGKQIRAIVDGAPFKNSETVTGWRFGDKTEKKDSRKEDEERLKAFFEALANWVPFRHAAQVIEVLLWALLFSAVFLLVWRYREWLRLFVGNLGLPQRARREAPTVMFGLDLSPESLPDDIAGNAERLWNEKPREALGLLYRGLLSRLLHDYRLPLKGSHTEGEVLRLVEGLEQQRPLLHYSQLLTAQWQALAYGHRLPADDARQRLCDGWRSLFAAGAKP
>NZ_CP022000.1|WP_003093932.1|5595629_5596403_-|enoyl-CoA-hydratase
MSELIRVERETGLLTLRLDRQDKKNALTRAMYSRMAEALLEAQADTAVRVVLITGGDACFTSGNDILDFLEQPPSLRDSPVGRFMSALLEFPKPVIAAVNGPAVGIGTTLLLHCDLVFVGRNARLKMPFVNLGLTPEFGSSLILPRMLGHAKAAELLMLGQDFSGEQAAAWGLANAALEDGATVLEHARDAARRFLHLAPSAVVESKRLMKAPFIEELRRVIAEEGDIFSTRLRSPEAIEALSAFMHRRQPDFSRFA
>NZ_CP022000.1|WP_023096090.1|5596468_5597395_-|iron-sulfur-binding-ferredoxin-reductase
MPDIRVGERRLAVAAGSNLLDALLAGGIAVPHSCRAGSCHACLVHCLQGEVEDTLPEALDPVRREAGWRLACQCRVLGDLVLQPFDPERDGLPARVVACHWLGDVLRLRLEPERPLRYRAGQHLLLWSDDGVARPYSLASLPHEDPWLEFHIDCSAPGAFCDRARRLAPGALLRLGELRGGALRYEPDWQERPLLLMAAGTGLAPLWGILREALRAEHQAPIQLLHLARNHYLASELAELAGRHPQLRVNLVSAAQLPSALADLRLVPRRSMALLCGQPASVERFARHLYLAGVPRSQTLADLFLPHA
>NZ_CP022000.1|WP_003093937.1|5597387_5598515_-|GGDEF-domain-containing-protein
MRTDKPPLKQRALQKLLLRRFGMAAGTYLLGLVLLWLALLSGFYRAAPTTAAASTTLVVACQLAFLWLFASGRNLRYADPSLTEPQVLVAIAWLTYFLYHVDSLRGTFMVFYVLALLFGVFQLPPRVFARCAALAFIAFSGIYLVEALQQRLELPGRAALQVLVMFIVMVWLSLFASYIQAMRQRMRQRRYALQAHQDTLRGMMRQLEDLVATDELTGLFNRRHFMRLASRALEDLLPNRQHGLALIDLDHFKRINDRHGHAAGDRVLQTFAAVARSCLRDGDVLARYGGEEFVLLLPHADAEQLESCCERLRLAFEQAEPVGVTVDTLSLSVGMTLLYADDDLDEALQRADQALYRAKRGGRNRCDATWEVTSA
>NZ_CP022000.1|WP_003116189.1|5598792_5600316_+|fumarate-hydratase
MAVIKQDDLIQSVADALQFISYYHPVDFIQAMHEAYLREESPAARDSMAQILINSRMCATGHRPICQDTGIVTVFVRVGMDVRWDGATMSVDDMINEGVRRAYNLPENVLRASILADPAGARKNTKDNTPAVIHYSIVPGDKVEVDVAAKGGGSENKSKMAMLNPSDSIVDWVLKTVPTMGAGWCPPGMLGIGIGGTAEKAAVMAKEVLMDPIDIHELKARGPQNRIEELRLELFEKVNQLGIGAQGLGGLTTVLDVKIMDYPTHAASLPVCMIPNCAATRHAHFVLDGSGPAELEAPSLDAYPEIVWEAGPSARRVDLDKITPEEVQSWKPGETLLLNGKMLTGRDAAHKRMVDMLNKGETLPVDLKGRFIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQILEQTGLLGMIGKSERGPIAIEAIKDNKAVYLMAVGGAAYLVAQAIKKSKVLAFAELGMEAIYEFEVKDMPVTVAVDTNGESVHITGPAVWQKKIAESLAIEVK
>NZ_CP022000.1|WP_073646363.1|5600412_5601720_-|divalent-metal-cation-transporter
MPTTATAPFCPSAVSHSVAVPADASPLRKLALFVGPGLLVSVGYMDPGNWATAIEAGSRFGYALLFVVVLASFSGMLLQSLCSRLGIATGRDLAQLSRERYRPGVARGQWLLAELSIVATDLAEVLGAALAFHLLLGVSITTGVVLTAFDTLIVLALQGANFRRLEAIVLGLIATIGACFFVELVLIGPYWPDVAAGLRPSWDTLSSQEPLYLAIGILGATVMPHNLYLHSSVVQTRVSGDDAASKRSAIRFSRLDTIGSLSLALLVNAAILILAAAAFHGSGHTEVVEIQDAYHLLDPLVGGALASFLFGFALLAAGQSSTFTGTIAGQVVMEGFLRAKIPCWQRRLITRGLALVPALIGVLWLGEGAVGKLLVLSQVVLSLQLPFALWPLIRFSSDRGLMGEFVNPRWVSALAWSLFGLISAANLTLLYFWFG
>NZ_CP022000.1|WP_003093942.1|5601803_5602112_-|ribbon-helix-helix-domain-containing-protein
MCELYVKADPILYESRSRSLRIRGVVTTLRLENQFWDILREIAEGEGLSTNQLITKLYEEVMDYRGEVLNFASFLRVSCTRYLAQRREKVAELSLVGQRAQA
>NZ_CP022000.1|WP_019485779.1|5602132_5602717_-|DJ-1/PfpI-family-protein
MMAAKKILMLVGDYAEDYETMVPFQALQMVGHQVHAVCPDKRAGQSVRTAIHDFEGDQTYSEKPGHNFTLNADFAQARAEDYDALLIPGGRAPEYLRLNEQVLALVRAFDAARKPIAAVCHGAQLLAAAGVLQGRACSAYPACAPEVRLAGGEYVDIPSDQAHVDGHLVTAPAWPAHPAWLARFLEVLGTRISH
>NZ_CP022000.1|WP_003101143.1|5602820_5603432_-|DUF2846-domain-containing-protein
MLRSLSLALSIVASLVGCSTPGAFFGAVDGPAFVAHPSADASHATVYLYRPRSQWADEELEAPGIFLNNELIGSLPSNGYLAFEFETGSYKLEMRRPLAGSFWTLFADGPMDFTRIASFMLEARAGSVYYLRYDELNPPPKSEHPAGEGDGPLQLVAADLGAAEIGATHQVQEPMQFAASGYRKRVQRSFWEGVGRALDKIGI
>NZ_CP022000.1|WP_023096091.1|5603525_5604806_-|acyltransferase
MATPDSKERFIGLEWLRFLLGLYVVVYHTLHTYPKEQKFPGLDELTSLGFFATSTFFVLSGFLLAHVYARSGRLRESARSFWTKRLSNLYPLHLFSLLLSILVLLALSHLGIGPELDKATPRFVIYDTNEVLGRTHPELFLHWMSNTELFVNSILQILLLQAWNPYYLTFNAPLWSLSTLMFFYLAFPFVAPRLMRSRHKWKVLALVWLVYLIPPVLVVASESYGIPWTGLLHRNPLLRLPEFLGGILAYGLFRGYRDRGMVPGRGLLAALVALVVAAFLVADYLFTQGAKHWYFLLHNGLLLPAQLLLVCLCALPADPKSAFVRHWSPRLGAASLSLFALHVPMFTLFSRSERLIAVPGRCLDDWRACTEAAAALPSSLLYYPLFLVLLVAFCVLFQERGVVPVRKWLVRRLMPAPALAKVPRPA
>NZ_CP022000.1|WP_003120863.1|5604905_5605985_-|phosphatidylserine/phosphatidylglycerophosphate/-cardiolipin-synthase-family-protein
MLLAIEAAQRSIELELYLVEDGHCAELFLVALLDARRRGVAVRCLFDGFGCLGLGSAWIQRLREAGGELRLYNPLRWKLTGGNLYRDHRKLLLVDGRLGYVGGAGITDEFWEPVSDVSAWREVMVEMDGPVVADWAALFERQWLACLEEKAWKPREGMTLTRLPPQPGAARGLGRVAYADARQHRDILQSLVRALNGSRRRIWLATPYFLPTWKVRRALRKAAQRGVEVRLLLAGRLTDHAPVRYAGQRYYPRLLRAGVRIHEYQPRFLHLKMVMVDDWVSVGSCNFDHWNLRFNLDANLEALDPDFTNEAAASLLADFADSREVTLAMWRARPLWMRLHQRLWGWLDRVVVNFLDRRR

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Crispr_ID: NZ_CP022000_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022000_4

6216013-6216104

Orphan

Consensus_repeat	Method
CCGACAACGGCAGCGAGCAGACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022000_4

>merge|NZ_CP022000|4|6216013-6216104|CRISPRCasFinder
CCGACAACGGCAGCGAGCAGACCATCGACCGCCTGCACAAGGACATGACCAAGGCCGAAGCCCGCCTGGCCGACAACGGCAGCGAACAGACC

>NZ_CP022000|4|4|6216013-6216104|CRISPRCasFinder
CCGACAACGGCAGCGAGCAGACC	ATCGACCGCCTGCACAAGGACATGACCAAGGCCGAAGCCCGCCTGG
CCGACAACGGCAGCGAACAGACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022000.1\|WP_003095503.1\|6215073_6215607_+\|bacterioferritin	unknown	unknown	gnl\|CDD\|225104
NZ_CP022000.1\|WP_003095483.1\|6210324_6210864_+\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_CP022000.1\|WP_023096199.1\|6225274_6225778_+\|urease-accessory-protein-UreE	unknown	unknown	gnl\|CDD\|237322
NZ_CP022000.1\|WP_003110936.1\|6212708_6214778_-\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|225529
NZ_CP022000.1\|WP_003095479.1\|6209753_6210170_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183165
NZ_CP022000.1\|WP_003095496.1\|6211894_6212707_+\|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR	unknown	unknown	gnl\|CDD\|226231
NZ_CP022000.1\|WP_003095488.1\|6210952_6211297_+\|osmotically-inducible-lipoprotein-OsmE	unknown	unknown	gnl\|CDD\|183058
NZ_CP022000.1\|WP_003095466.1\|6206489_6207236_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_003095524.1\|6224415_6225045_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236881
NZ_CP022000.1\|WP_023096195.1\|6217032_6217647_-\|cytochrome-b/b6-domain-containing-protein	unknown	unknown	gnl\|CDD\|226602
NZ_CP022000.1\|WP_003095476.1\|6208313_6209579_+\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212673
NZ_CP022000.1\|WP_003123548.1\|6218461_6219151_+\|heavy-metal-response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|130454
NZ_CP022000.1\|WP_003095519.1\|6220511_6221828_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
NZ_CP022000.1\|WP_023096196.1\|6219129_6220521_+\|heavy-metal-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|273593
NZ_CP022000.1\|WP_003095492.1\|6211340_6211748_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377850
NZ_CP022000.1\|WP_078451797.1\|6222047_6223160_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|225779
NZ_CP022000.1\|WP_003121125.1\|6207242_6208106_-\|oxaloacetate-decarboxylase	unknown	unknown	gnl\|CDD\|225311
NZ_CP022000.1\|WP_003112308.1\|6216268_6217036_-\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239026
NZ_CP022000.1\|WP_003095513.1\|6217700_6218324_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022000.1\|WP_023096198.1\|6223156_6224257_-\|ferredoxin-reductase	unknown	unknown	gnl\|CDD\|99812

Protein	Function_ID	Function_description	E-value
NZ_CP022000.1\|WP_003095503.1\|6215073_6215607_+\|bacterioferritin	gnl\|CDD\|225104	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism].	1.01703e-50
NZ_CP022000.1\|WP_003095483.1\|6210324_6210864_+\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	5.52525e-29
NZ_CP022000.1\|WP_023096199.1\|6225274_6225778_+\|urease-accessory-protein-UreE	gnl\|CDD\|237322	PRK13261, ureE, urease accessory protein UreE; Provisional.	3.45365e-58
NZ_CP022000.1\|WP_003110936.1\|6212708_6214778_-\|AsmA-family-protein	gnl\|CDD\|225529	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane].	0
NZ_CP022000.1\|WP_003095479.1\|6209753_6210170_-\|hypothetical-protein	gnl\|CDD\|183165	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF.	1.76735e-18
NZ_CP022000.1\|WP_003095496.1\|6211894_6212707_+\|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR	gnl\|CDD\|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	1.65802e-48
NZ_CP022000.1\|WP_003095488.1\|6210952_6211297_+\|osmotically-inducible-lipoprotein-OsmE	gnl\|CDD\|183058	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE.	1.90142e-51
NZ_CP022000.1\|WP_003095524.1\|6224415_6225045_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|236881	PRK11202, PRK11202, HTH-type transcriptional repressor FabR.	7.9449e-41
NZ_CP022000.1\|WP_023096195.1\|6217032_6217647_-\|cytochrome-b/b6-domain-containing-protein	gnl\|CDD\|226602	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion].	4.38184e-70
NZ_CP022000.1\|WP_003095476.1\|6208313_6209579_+\|Hsp70-family-protein	gnl\|CDD\|212673	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins. This bacterial subfamily includes the uncharacterized Escherichia coli YegD. It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. YegD lacks the SBD. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but instead, function as NEFs for their Hsp70 partners, other family members function as both chaperones and NEFs.	0
NZ_CP022000.1\|WP_003123548.1\|6218461_6219151_+\|heavy-metal-response-regulator-transcription-factor	gnl\|CDD\|130454	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator. Members of this family contain a response regulator receiver domain (pfam00072) and an associated transcriptional regulatory region (pfam00486). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members encoded by genes adjacent to genes for encoding a member of the heavy metal sensor histidine kinase family (TIGRFAMs:TIGR01386), its partner in the two-component response regulator system. [Regulatory functions, DNA interactions].	2.46904e-112
NZ_CP022000.1\|WP_078451797.1\|6222047_6223160_-\|fatty-acid-desaturase	gnl\|CDD\|225779	COG3239, DesA, Fatty acid desaturase [Lipid metabolism].	1.46041e-65
NZ_CP022000.1\|WP_023096196.1\|6219129_6220521_+\|heavy-metal-sensor-histidine-kinase	gnl\|CDD\|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	0
NZ_CP022000.1\|WP_003095492.1\|6211340_6211748_-\|hypothetical-protein	gnl\|CDD\|377850	pfam07498, Rho_N, Rho termination factor, N-terminal domain. The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It it thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers. This domain is found to the N-terminus of the RNA binding domain (pfam07497).	0.000208897
NZ_CP022000.1\|WP_003121125.1\|6207242_6208106_-\|oxaloacetate-decarboxylase	gnl\|CDD\|225311	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism].	1.3777e-87
NZ_CP022000.1\|WP_003112308.1\|6216268_6217036_-\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239026	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains. This domain is found in a variety of oxidoreductases. Common features of all known members of this family, like sulfite oxidase and nitrite reductase, are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	5.57634e-96
NZ_CP022000.1\|WP_003095519.1\|6220511_6221828_-\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.70918e-108
NZ_CP022000.1\|WP_023096198.1\|6223156_6224257_-\|ferredoxin-reductase	gnl\|CDD\|99812	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	5.29889e-86

>NZ_CP022000.1|WP_003095503.1|6215073_6215607_+|bacterioferritin
MTTVQLTDVQTLRDRARKNIQEGAVTEGYSADRQTVLRLLNEALATELVCFLRYKRHYFMATGLKASIAAAEFLEHANQEMQHADQLAERIMQLGGEPDFNPRGLEERSHAEYVEGKTLKDMVTENLIAERIAIDSYREIITYLGNDDPTTRRIFEEILAQEEEHADDMADILDDLA
>NZ_CP022000.1|WP_003110936.1|6212708_6214778_-|AsmA-family-protein
MTRGRKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREEGEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQIKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRLEVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQDASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTPAYSTDGHLLARLKEEGGALFRYENFNGKVGASDLHGSLTFVARQPRPKLSGKLTSEQLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIVHSDQLPISDLYTHLVLNDGLLRLEPLRFGVAGGKLESDIRLDGGKQPMQSRVKMSARGFKLKQLFPGFAPMQTSFGELNGDASLSGSGNSVAKILGGADGELKMLINDGAISKGLTEIAGLNVGNYLVTKLFGDDEVKINCAAADFGLQKGLMTSRLFVFDTENALVNVDGTVNFANEKLDLDVTPHSKGLRIFSLRSPLYVRGTFAKPDAGVHAGPLVARGAGMIALGVAVGPAASLLALVAPSKSDDNQCTALLQRMRQPAKAPAGKR
>NZ_CP022000.1|WP_003095496.1|6211894_6212707_+|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR
MLTIGQLARIFEISTKTLRHYDAIGLFVPARTGSDNGYRYYQPEQIEQLSRILALRRLDVPLEAIDRLKRDGALDDPQRLRHFLQRHQHTLREEISARQRLLAELDRTLATLAHWRIRNMHARIVERPAFSVVGMEYFGSAPGDTIGQLWERFIPREHEIAGKHDPEVSYGICAQQPNGEFHYVAGFEVQEGWPVPEGMVRFQVPAQKYAVFTHKGTAPQIAESFQAIYSHLLAERGLEPKAGVDFEYYDQRFRGPLDPNSQVDLYIPIY
>NZ_CP022000.1|WP_003095492.1|6211340_6211748_-|hypothetical-protein
MPRGDKSKYSDKQQRKAEHIEESYKAKGVSESEAEARAWATVNKQSGGGERKGGSGRAKSETAKRADRKDSAHRAAQARSGRPANRGSASRGKRQGSTSVSEMTREELMQLARKRDIRGRSTMRKAELIEALSRA
>NZ_CP022000.1|WP_003095488.1|6210952_6211297_+|osmotically-inducible-lipoprotein-OsmE
MYKQSLAALFVMATLAGCASTKVQNPVNYITFRNEPLVKDVEKGMSQQEVLRIGGTPSGTQKRLMKPGSCNSYILNKDGQQQPFYVSFDGSGKVDGSGFLSCSELDRHERDARP
>NZ_CP022000.1|WP_003095483.1|6210324_6210864_+|MOSC-domain-containing-protein
MQQVIAVSLCATHAFSKQVRPAIRLLKGLGVEGDAHHGVTVKHRSRVRQDPTQPNLRQVHLIHEELHDELRASGFAIGPGTMGENITTRGVDLLGLPTGTRLRLGESALVELTGLRNPCSQLDNYQPGLTAAVLGRDEQGNLIRKAGVMAIVLEDGEVRPGDAIDIQLPPLPHRALEKV
>NZ_CP022000.1|WP_003095479.1|6209753_6210170_-|hypothetical-protein
MNILRIPMFVLAMAVSAHGFAATAQQEKMTACNAEATTKALKGDERKAFMSGCLKAGAPAGGKATAQQEKMKSCNADASAKSLKGDERKAFMSSCLKAGGSAKAATQQEKMKTCNADATAKALKGDERKAFMSTCLKK
>NZ_CP022000.1|WP_003095476.1|6208313_6209579_+|Hsp70-family-protein
MNPSTAARALGIDFGTSNSTVGWWRPEVEPLIELEDGKITLPSVVFFNVEERRPVYGRQALGEYLEGYEGRLMRSLKSLLGSKLLKSETTVLGSALPFKDLLGLFIGQLKARGEAAAGQAFDAVVLGRPVFFVDDDPEADREAQDTLVQVANKLGFKEVSFQYEPIAAAFDYERGIQREELVLIVDIGGGTSDFSLVRLAPERRNLAERQDDILATGGVHIGGTDFDKQLSLEGVMPLFGYGSRMKSDAFMPTSYHLNLATWHTINAVYAQKSQLALKNMRYDIVDSTGIDRLFRLIEERAGHWLAMQVEDSKIRLTETERLHLSLERIEAGLGVELTRGLFENAVDGLLERVRNSVAQLLASAGVDPDRVDTVFFTGGSSGIPALRRSVSAMLPNARHVEGNLFGSIGSGLAIEAKKRYG
>NZ_CP022000.1|WP_003121125.1|6207242_6208106_-|oxaloacetate-decarboxylase
MHRASHHELRAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFAAIKATYDCLREERGAVASDLTASELSKKYTFPEEYQAWARDYMEVKE
>NZ_CP022000.1|WP_003095466.1|6206489_6207236_+|hypothetical-protein
MKIDSASSSPSLAQRQLMTRTPDQDFQRDFQAAYARLAVAAEGSAEQAGALADTLGATQLEYSRVRGVSLEDQLRFAHVLNRACENGAQLDARGFLARLGADDLQALQRNMGLAEPIRVEALSEEGARNLLLPEGYSVDLDGDGITEVGAAKIRHFPPRDAPQAFLDQWLALTAGMDGAAYSNARDGLQWAFDIRAMAGQPLATDQLASYRTAVDDYLGMLAEHRHALVPGQYERDLPLYQALRQRLA
>NZ_CP022000.1|WP_003112308.1|6216268_6217036_-|molybdopterin-dependent-oxidoreductase
MKGPEKKRAKIAIDPSSERQMVDLQRRLLLRGGLSLGALAMLSGCRLQDGDSVDKVLWAMSRWNDRVQAWLFSRTRLAPTFDPSQVASPFPFNAFYPAYNVPEIDLPEYRLQVSGRVRDKRPWSLEQLRRLPQASQVTQLICIEGWSAIGQWSGVPLRTFLELVGADTSAKYVGFKCADRYYSSLDMPSALHPQTLLALEMSGQALPEENGYPLRLRIPTKLGFKNAKHVVEIFVSNSNPGGYWEDQGYNWFSGV
>NZ_CP022000.1|WP_023096195.1|6217032_6217647_-|cytochrome-b/b6-domain-containing-protein
MNRALHAWPVRLCHWLNAYAMACLIGSGWGIYNASPLLDFRFPAWATLGGWLGGSIAWHLAAMWLLLGNGLCYLAYGLSSGHFRRDFLPLSAAGVWRDLRLALGLRLVHEPGRYNAVQRLLYWLVLGLGALLVLSGLAIWKPVQLHGLTVLFGGFQGARWVHFLAMAGGVGFVVVHLLLVLLVPRTLVPMIIGREWRRGRRSEG
>NZ_CP022000.1|WP_003095513.1|6217700_6218324_-|hypothetical-protein
MLRLKASPALLFGLLLASAASFAAQPPAGMLQPLRGTIQQAADDHLQLKARNGQQLTVRLTDKTAIRAVSLAKPEDIQPDSFIGTAAVPQPDGTLKALEVHVFAPSLRGSGEGHRPWENADGSASTMTNGTVGNLVVSQGRRMTVKYGDGEKTVVVPDDVPIVSLEPGERSLLKPGAKVVLFPQKGADGSLTALAISVGKDGVTPPM
>NZ_CP022000.1|WP_003123548.1|6218461_6219151_+|heavy-metal-response-regulator-transcription-factor
MRILVIEDDTKTGEYLKKGLGESGYAVDWSQHGADGLYLALENRYDLVVLDVMLPGLDGWQIMEVLRKKHDVPVLFLTARDQLQDRIRGLELGADDYLVKPFSFTELLLRIRTLLRRGVVREAEQVQLADLHLDVLRRKVSRQGQVIALTNKEFALLHLLMRREGEVLSRTLIASEVWDMNFDSDTNVVDVAIKRLRAKVDNPFPNKLIHTVRGIGYVCEERPCPPAAP
>NZ_CP022000.1|WP_023096196.1|6219129_6220521_+|heavy-metal-sensor-histidine-kinase
MPARRSLTLYAALLFAAVAALVVSAVGFYLYRSVEEAMLRRSDVMVAGRVEHFRNLLRDNLTLAELKARPRLFENMLGNEQDILLLGQPGEAPIVVVNPRHERLPSLRGVAAGQALNPSVVHAALTHDGVPMRVLAAEVLVGGREPLQITAAHLLLGETRMLAQYRDRVIAAVLLAFLGTALLGWLVLRHGLRPLRTLAAKAAEIHPTSLDTRLDVAAAPAELQQVAQSFNAMLERLDDGYQRLQQFSADLAHEIRTPIGSLMGHGQVALRQPRSNEEYQALIASNQEELERIARMVESILFLARADDVRAAVERSRLDLGEELRRQAEYFEGLAEERGLSLDVQISGQLRADPQLFRRALSNLLANAIRYASAESLIEVRGLRRSGEFLLSVENACDRLPAEPLSRLFDRFYRGDAARSDAQSSGLGLAIVQAIMRLHGGRAEASAPAPGRIRFELAFPAQD
>NZ_CP022000.1|WP_003095519.1|6220511_6221828_-|MFS-transporter
MFSPLVTFPALYTATLLMLAGSGLFTTYIGLRLTQEGAGDLWVGGLMASYYFGLVCGGKFGHKLIASFGHIRSYVACAGIATVTVLLHALVDQLEVWLLLRFITGAVMMNQYMVIESWLNEQAESHQRGKVFAGYMVAVDLGLVLGQGLLALSPTLDYKPLLLVAICFASCLIPLAMTRRVHPAKLVAAPLEVRFFWQRVPQALGTIFIAGLMVGAFYGLAPVYANRNGLDASQSSFFVGMCIVAGFCAQWPLGWLSDRLDRSWLIRGNAVLLCLASIPMWGLVTLPYWLLLANGFVTGMLLFTLYPLAVALANDHVEQPRRVALSAMLLTTYGVGACIGPLVAGALMRHFGPGLFYMLVSGYAVLLVFWVQPKRVTGEHRVDEAPLQHVAMPDTVSPMAATLDPRVEEVPEELVVEAPANIGRSDGEPDAGEKPAQS
>NZ_CP022000.1|WP_078451797.1|6222047_6223160_-|fatty-acid-desaturase
MNRPASPAMRDDRELTPEQLAAFGAELDALRQRTLADLGADDARYIRRVRAAVRVCCWSGRALLMFGWLPPTWLLGSLLLGLGKILENMELGHNVMHGQYDWMNDPEFAGRAYEWDIAGPSDFWRHTHNHIHHTYTNVLGKDDDVGYGVVRLFPEQRWKPFYRWQPLWVTLQALLFQYAVAIQHLRLDKYAKGRLDKAELMPLLRRLRAKLARQWTKDYLLFPLLGLFAGGFGAVFVGNLLANVLRNLWTFTVIFCGHFTEKAVVFPPSVLEGETRGHWYLRQLRGSSNLEGGPLFHILTGNLSHQIEHHLYPDLPARRYAALSREVREIARRYGQTYNSGRLGRQFLTVLRRIWVYRLPPREPLPAGRS
>NZ_CP022000.1|WP_023096198.1|6223156_6224257_-|ferredoxin-reductase
MALLPLALLTPLLAPLRRLAARGWLREADVDGLLRHAHPLASLNRHYARVEARYWVADDMLALALRTAPGWPPARPGQHIQLLAERDGVRVGRSYSLTRVVGERLEIAVKRHPDGLLSPWLCEHLAVGQRVELQPAQGDLRWPMQAEAVCLLAAGSGLTPLLGLLREALENGYRGPVLWLHYVRHPGLRAWLGELEALAARHPNLELRWSLTRGARADGCLEGHFQPRHLDGWAADLARSQALACGPAAFVEAVGEQLGARFAGLQTESFSVPRWRSGEAPREVRLRFARSQREVSGDSAASLLEQAEAHGLRPAHGCRQGICASCTCVLLSGCVRDLRSGALCSEPGQSIRLCVSAAHGDLALDL
>NZ_CP022000.1|WP_003095524.1|6224415_6225045_+|TetR-family-transcriptional-regulator
MSSPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRRNEFELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADLVVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPD
>NZ_CP022000.1|WP_023096199.1|6225274_6225778_+|urease-accessory-protein-UreE
MLVIHQRLPARSPRWDEELHLTYEARSKSRLRCFAASGEEVGLFLERGQAPLADGDCLEARDGRLVRVVARSERLLHVTCASPLELTRAAYHLGNRHVALQVGDGWLRLLDDYVLKAMLEQLGATVEAIEAPFQPEHGAYGGGHHHSHHGEAEFNYAPRLHQFGVRR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NZ_CP022000_2	2.1\|5347796\|60\|NZ_CP022000\|CRISPRCasFinder	5347796-5347855	60	MK510989	Pseudomonas phage BR322, partial genome	31234-31293	1.0
NZ_CP022000_2	2.1\|5347796\|60\|NZ_CP022000\|CRISPRCasFinder	5347796-5347855	60	MK510966	Pseudomonas phage CF53, partial genome	31235-31294	1.0
NZ_CP022000_2	2.1\|5347796\|60\|NZ_CP022000\|CRISPRCasFinder	5347796-5347855	60	KY707339	Pseudomonas phage JBD68, complete genome	33757-33816	1.0
NZ_CP022000_2	2.1\|5347796\|60\|NZ_CP022000\|CRISPRCasFinder	5347796-5347855	60	MK510981	Pseudomonas phage BR143, partial genome	31255-31314	1.0
NZ_CP022000_2	2.1\|5347796\|60\|NZ_CP022000\|CRISPRCasFinder	5347796-5347855	60	MK510967	Pseudomonas phage CF54, partial genome	4952-5011	1.0
NZ_CP022000_2	2.1\|5347796\|60\|NZ_CP022000\|CRISPRCasFinder	5347796-5347855	60	MK510991	Pseudomonas phage BR141, partial genome	31216-31275	1.0
NZ_CP022000_2	2.1\|5347796\|60\|NZ_CP022000\|CRISPRCasFinder	5347796-5347855	60	MK510980	Pseudomonas phage BR123, partial genome	31234-31293	1.0
NZ_CP022000_2	2.1\|5347796\|60\|NZ_CP022000\|CRISPRCasFinder	5347796-5347855	60	MK510983	Pseudomonas phage BR178, partial genome	31235-31294	1.0

1. spacer 2.1|5347796|60|NZ_CP022000|CRISPRCasFinder matches to MK510989 (Pseudomonas phage BR322, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

2. spacer 2.1|5347796|60|NZ_CP022000|CRISPRCasFinder matches to MK510966 (Pseudomonas phage CF53, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

3. spacer 2.1|5347796|60|NZ_CP022000|CRISPRCasFinder matches to KY707339 (Pseudomonas phage JBD68, complete genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

4. spacer 2.1|5347796|60|NZ_CP022000|CRISPRCasFinder matches to MK510981 (Pseudomonas phage BR143, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

5. spacer 2.1|5347796|60|NZ_CP022000|CRISPRCasFinder matches to MK510967 (Pseudomonas phage CF54, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

6. spacer 2.1|5347796|60|NZ_CP022000|CRISPRCasFinder matches to MK510991 (Pseudomonas phage BR141, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

7. spacer 2.1|5347796|60|NZ_CP022000|CRISPRCasFinder matches to MK510980 (Pseudomonas phage BR123, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

8. spacer 2.1|5347796|60|NZ_CP022000|CRISPRCasFinder matches to MK510983 (Pseudomonas phage BR178, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

32080 : 88739

Ostreococcus_lucimarinus_virus(33.33%)

integrase,holin,transposase

attL 28215:28229|attR 88987:89001

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
28215:28229	attL	NA	NA	NA	NA
WP_003118485.1\|32080_33004_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003097323.1\|33020_34532_-\|holin	choline-sulfatase	NA	NA	NA	NA
WP_003122286.1\|34644_35559_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003114635.1\|35569_35947_+	DOPA 4,5-dioxygenase	NA	NA	NA	NA
WP_003097330.1\|35925_36291_-	Hpt domain-containing protein	NA	NA	NA	NA
WP_003111192.1\|36298_36922_-	response regulator transcription factor	NA	NA	NA	NA
WP_003097337.1\|37107_37914_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_003142212.1\|37910_39119_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_023095011.1\|39222_40110_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003097345.1\|40210_40426_+	dodecin family protein	NA	NA	NA	NA
WP_003097347.1\|40609_40837_+	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_023095012.1\|41132_42821_+	two-partner secretion system transporter TpsB2	NA	NA	NA	NA
WP_087930939.1\|42933_53304_+	two-partner secretion system putative hemagglutinin TpsA2	NA	NA	NA	NA
WP_123903198.1\|53303_53771_+	hypothetical protein	NA	NA	NA	NA
WP_152934910.1\|53993_54464_+	hypothetical protein	NA	NA	NA	NA
WP_016263996.1\|54570_55272_+\|transposase	transposase	NA	NA	NA	NA
WP_124083303.1\|55392_55638_+	hypothetical protein	NA	NA	NA	NA
WP_071536914.1\|56677_57031_+	DUF3969 family protein	NA	NA	NA	NA
WP_003083536.1\|57498_57894_+	hypothetical protein	NA	NA	NA	NA
WP_024947195.1\|58158_59568_-	MgtC/SapB family protein	NA	NA	NA	NA
WP_023095015.1\|59731_61105_+	T3SS effector bifunctional cytotoxin exoenzyme T	NA	NA	NA	NA
WP_003111706.1\|61600_62287_+	hypothetical protein	NA	NA	NA	NA
WP_003083569.1\|62317_62671_+	DUF4810 domain-containing protein	NA	NA	NA	NA
WP_003083573.1\|62667_63333_+	DUF799 domain-containing protein	NA	NA	NA	NA
WP_003083575.1\|63347_63731_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023095016.1\|64012_65674_-	hypothetical protein	NA	NA	NA	NA
WP_003083582.1\|66288_66429_+	hypothetical protein	NA	NA	NA	NA
WP_023092239.1\|67250_69083_+	asparagine synthase (glutamine-hydrolyzing)	G9E4W0	Ostreococcus_lucimarinus_virus	6.2e-22	23.7
WP_003083588.1\|69135_69564_-	cupin domain-containing protein	NA	NA	NA	NA
WP_023095017.1\|69772_70321_-	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	6.1e-34	41.6
WP_003083593.1\|70359_70866_-	DUF1993 family protein	NA	NA	NA	NA
WP_003083596.1\|70931_71852_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_022580745.1\|71959_72847_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_023095018.1\|72909_73614_+	DsbA family protein	NA	NA	NA	NA
WP_003118563.1\|73697_74153_+	OsmC family protein	NA	NA	NA	NA
WP_003083610.1\|74263_74497_+	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_003083612.1\|74508_74946_-	hypothetical protein	NA	NA	NA	NA
WP_003083614.1\|75002_75419_-	hypothetical protein	NA	NA	NA	NA
WP_003118564.1\|75510_76638_+	hypothetical protein	NA	NA	NA	NA
WP_003114660.1\|76645_77629_-	hypothetical protein	NA	NA	NA	NA
WP_003118497.1\|77661_78327_-	HAD family hydrolase	NA	NA	NA	NA
WP_003083618.1\|78319_78862_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_003083621.1\|78939_80985_+	oligopeptidase A	A0A1V0SD92	Indivirus	4.6e-34	21.3
WP_003083624.1\|80981_81257_+	YheV family putative metal-binding protein	NA	NA	NA	NA
WP_003152715.1\|81345_81609_+	hypothetical protein	NA	NA	NA	NA
WP_011979087.1\|81655_84010_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_003152713.1\|84006_86109_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_023083569.1\|86101_87046_+	hypothetical protein	NA	NA	NA	NA
WP_123789211.1\|87099_87429_+	hypothetical protein	NA	NA	NA	NA
WP_003152712.1\|87872_88739_+\|integrase	site-specific integrase	NA	NA	NA	NA
88987:89001	attR	NA	NA	NA	NA

DBSCAN-SWA_2

103493 : 163814

uncultured_virus(14.29%)

integrase,plate,transposase

attL 99681:99708|attR 131392:131419

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
99681:99708	attL	NA	NA	NA	NA
WP_011914409.1\|103493_105659_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_079389563.1\|105655_106675_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_034065824.1\|106969_107401_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A218MND2	uncultured_virus	1.5e-24	44.7
WP_003131969.1\|107536_107971_-	mercury resistance transcriptional regulator MerR	NA	NA	NA	NA
WP_003131974.1\|108042_108393_+	mercuric ion transporter MerT	NA	NA	NA	NA
WP_003131987.1\|108405_108681_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_003158917.1\|108752_110438_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-40	29.3
WP_000995360.1\|110455_110821_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_003132004.1\|110817_111054_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_011979107.1\|111050_112052_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_003150544.1\|112055_112985_-	recombinase family protein	E5FFF9	Burkholderia_phage	1.9e-40	46.9
WP_003089107.1\|113186_113426_+	hypothetical protein	NA	NA	NA	NA
WP_003150546.1\|113425_113836_+	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_003299771.1\|113839_116833_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	5.7e-259	47.6
WP_003089113.1\|116845_117058_-	hypothetical protein	NA	NA	NA	NA
WP_003150552.1\|117065_117341_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_003089115.1\|117353_117704_-	mercury transporter MerT	NA	NA	NA	NA
WP_003089120.1\|117778_118177_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_003464995.1\|118479_119325_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_003464991.1\|119354_119873_-	DUF417 family protein	NA	NA	NA	NA
WP_005005993.1\|120603_120978_+	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA
WP_003464988.1\|121838_122105_-	hypothetical protein	NA	NA	NA	NA
WP_003464986.1\|122274_122556_-	DUF427 domain-containing protein	NA	NA	NA	NA
WP_005005995.1\|122623_122896_-	glutaredoxin 3	A0A1X7BZ88	Faustovirus	1.3e-08	42.6
WP_002118292.1\|123349_124096_-	oxidoreductase	NA	NA	NA	NA
WP_003464980.1\|124088_124691_-	sulfite oxidase-like oxidoreductase	NA	NA	NA	NA
WP_003464979.1\|125158_125629_+	hypothetical protein	NA	NA	NA	NA
WP_010591687.1\|125760_125958_-	hypothetical protein	NA	NA	NA	NA
WP_003464978.1\|125954_126248_-	DUF1330 domain-containing protein	NA	NA	NA	NA
WP_005006001.1\|126306_126738_-	heme-binding protein	NA	NA	NA	NA
WP_002118279.1\|126810_127824_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_011979111.1\|128271_129240_-	magnesium and cobalt transport protein CorA	NA	NA	NA	NA
WP_003464969.1\|129236_129941_-	glutathione S-transferase	NA	NA	NA	NA
WP_003464967.1\|130081_130621_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_003464965.1\|130622_131066_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_034037831.1\|132257_133433_-	HNH endonuclease	NA	NA	NA	NA
131392:131419	attR	NA	NA	NA	NA
WP_003150565.1\|135624_137337_-	hypothetical protein	NA	NA	NA	NA
WP_003083630.1\|138967_139882_-	hypothetical protein	NA	NA	NA	NA
WP_003083632.1\|139943_141656_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_003128189.1\|141648_142848_-	ABC transporter permease	NA	NA	NA	NA
WP_023095019.1\|142847_143567_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-18	36.3
WP_023095020.1\|143563_146662_-	protein kinase	M1PCM5	Moumouvirus	2.5e-23	27.8
WP_003083639.1\|146669_147398_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_003083642.1\|147407_148088_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_023095021.1\|148084_151618_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_003115051.1\|151614_152964_-	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_003115052.1\|152970_154305_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_003083660.1\|154320_154785_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_033984517.1\|154829_156353_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_003083666.1\|157842_158361_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_003104973.1\|158373_159870_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003083670.1\|159945_160434_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_003119488.1\|160601_161447_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003111625.1\|161448_161958_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_003083676.1\|161954_163814_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_3

767615 : 823096

uncultured_Caudovirales_phage(26.92%)

tRNA,plate,transposase,holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003109020.1\|767615_768641_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	3.7e-109	58.1
WP_003085061.1\|768719_769289_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_003099587.1\|769372_769726_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_003085067.1\|769716_770259_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_023095147.1\|770231_771464_-	multifunctional CCA addition/repair protein	A0A076G5T8	Escherichia_phage	5.3e-78	43.1
WP_003085071.1\|771507_772014_-	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_003085073.1\|772108_773662_-	SpoVR family protein	NA	NA	NA	NA
WP_003099579.1\|773658_774930_-	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	4.2e-09	37.2
WP_003085078.1\|775030_776953_-	PrkA family serine protein kinase	NA	NA	NA	NA
WP_003099577.1\|777231_777564_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA
WP_003121837.1\|777607_778459_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.1e-08	33.3
WP_003085085.1\|778458_778839_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_003099569.1\|778875_779682_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_003109023.1\|779797_780784_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_003109024.1\|780780_782073_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_003085092.1\|782053_784855_-	LPS-assembly protein LptD	NA	NA	NA	NA
WP_023095148.1\|784981_785998_+	phosphotransferase	NA	NA	NA	NA
WP_003117959.1\|785994_786669_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_023095149.1\|786670_787429_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_003137371.1\|787429_788491_-	DUF3530 family protein	NA	NA	NA	NA
WP_023095150.1\|788642_791036_+	PAS domain S-box protein	NA	NA	NA	NA
WP_003085103.1\|791081_791714_+	response regulator transcription factor	NA	NA	NA	NA
WP_023095151.1\|791842_792877_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_003085109.1\|793110_794220_+	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-28	34.4
WP_003109043.1\|794275_795322_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014604087.1\|795436_796684_+	ABC transporter permease	NA	NA	NA	NA
WP_003085119.1\|796789_797620_+	ABC transporter permease	NA	NA	NA	NA
WP_003085122.1\|797743_798418_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_003109045.1\|798417_799236_+	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_003085126.1\|799308_800787_+	anthranilate synthase component I	NA	NA	NA	NA
WP_023092358.1\|801104_801419_-	transcription regulatory protein PrtN	NA	NA	NA	NA
WP_003113202.1\|801518_802289_-	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	1.4e-71	59.1
WP_003085132.1\|802746_802947_+	repressor PtrB	W6ATC1	Enterobacter_phage	3.7e-05	58.3
WP_023095152.1\|802994_803354_+	hypothetical protein	NA	NA	NA	NA
WP_003137382.1\|803717_804167_+\|holin	holin	B5TK61	Pseudomonas_phage	5.0e-26	53.3
WP_003101620.1\|804188_804704_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	1.8e-32	43.4
WP_003085141.1\|804700_805258_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	4.6e-45	71.1
WP_003085143.1\|805410_805737_+	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.2e-30	60.2
WP_003085151.1\|805733_806621_+	bacteriophage protein	S4TNY7	Salmonella_phage	5.3e-88	59.8
WP_023092364.1\|806613_807147_+\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	1.1e-61	64.0
WP_023095153.1\|807148_809257_+\|tail	phage tail fiber protein	Q9ZXK6	Pseudomonas_virus	5.5e-224	52.0
WP_003085172.1\|809265_809706_+	hypothetical protein	NA	NA	NA	NA
WP_003085173.1\|809748_810909_+\|tail	phage tail sheath family protein	Q38068	Phage_PS17	1.2e-188	83.4
WP_003085175.1\|810921_811425_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	8.0e-65	73.5
WP_003085178.1\|811439_811784_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_023095154.1\|811953_814191_+\|tail	phage tail length determinator protein	NA	NA	NA	NA
WP_034065812.1\|814200_815073_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	1.8e-75	52.1
WP_003101635.1\|815047_815254_+	hypothetical protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.3e-18	64.2
WP_023095155.1\|815311_816301_+	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	2.2e-106	55.8
WP_023095156.1\|816333_816963_+	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	1.6e-86	78.0
WP_003121852.1\|816959_817322_+	hypothetical protein	H2BDA0	Pseudomonas_phage	4.2e-15	47.9
WP_003137395.1\|817318_817576_+	hypothetical protein	A0A125RNP3	Pseudomonas_phage	6.4e-18	64.6
WP_023091406.1\|817923_818529_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	3.5e-75	66.3
WP_003085203.1\|818530_819580_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-111	57.8
WP_003142812.1\|819576_820413_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.2e-70	56.9
WP_003085214.1\|820474_821119_-	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA
WP_079389562.1\|821390_821828_+	OsmC family protein	NA	NA	NA	NA
WP_010794468.1\|821869_823096_+\|transposase	IS256-like element ISPa1328 family transposase	A0A218MNI5	uncultured_virus	8.0e-50	47.1

DBSCAN-SWA_4

1416258 : 1455516

Pseudomonas_phage(98.0%)

transposase,capsid,integrase,tail,head

attL 1432585:1432600|attR 1453968:1453983

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003121473.1\|1416258_1416483_-	hypothetical protein	A0A125RNE4	Pseudomonas_phage	5.5e-34	100.0
WP_034005510.1\|1416556_1416772_-	hypothetical protein	A0SMR1	Pseudomonas_virus	1.3e-27	92.9
WP_034005512.1\|1416768_1417071_-	hypothetical protein	A0A0S2SY61	Pseudomonas_phage	1.1e-40	82.0
WP_034005514.1\|1417070_1417916_-	hypothetical protein	I6P8E4	Pseudomonas_phage	6.3e-155	96.1
WP_033995357.1\|1417912_1420120_-	hypothetical protein	I6PCB1	Pseudomonas_phage	0.0e+00	99.3
WP_004367213.1\|1420109_1420328_-	hypothetical protein	I6P9E8	Pseudomonas_phage	3.4e-36	100.0
WP_016050140.1\|1420324_1420564_-	hypothetical protein	I6P9F0	Pseudomonas_phage	1.1e-37	100.0
WP_049259920.1\|1420572_1421394_-	DUF2163 domain-containing protein	I6PBD5	Pseudomonas_phage	6.1e-155	98.8
WP_088445832.1\|1421383_1423087_-	hypothetical protein	A0A075CEZ1	Pseudomonas_phage	0.0e+00	97.4
WP_034017612.1\|1423086_1424010_-	hypothetical protein	A0A0A7DJR0	Pseudomonas_phage	2.3e-182	97.7
WP_022580019.1\|1424011_1424968_-	hypothetical protein	A0A0A1IUZ9	Pseudomonas_phage	1.4e-190	99.4
WP_088445833.1\|1424975_1428821_-\|tail	phage tail tape-measure protein	A0A0S4L7E6	Pseudomonas_phage	0.0e+00	94.9
WP_003139971.1\|1429047_1429554_-	hypothetical protein	A0A0S4L2X3	Pseudomonas_phage	3.2e-90	100.0
WP_003094267.1\|1429555_1430308_-	hypothetical protein	A0A0S4L1I6	Pseudomonas_phage	4.6e-141	100.0
WP_003139972.1\|1430311_1430521_-	hypothetical protein	A0A0S4L313	Pseudomonas_phage	2.4e-31	100.0
WP_003094263.1\|1430517_1430973_-	hypothetical protein	A0A0S4L2X9	Pseudomonas_phage	8.5e-82	100.0
WP_003094261.1\|1430974_1431484_-	DUF1320 domain-containing protein	A0A0S4L0B5	Pseudomonas_phage	1.0e-91	100.0
WP_003094258.1\|1431491_1431818_-	hypothetical protein	A0A0S4L5D5	Pseudomonas_phage	1.1e-51	100.0
WP_003094256.1\|1431817_1432012_-	hypothetical protein	A0A0S4L2Y0	Pseudomonas_phage	6.0e-29	100.0
WP_088445834.1\|1432058_1432988_-\|capsid	phage capsid protein	A0A0S4L2T7	Pseudomonas_phage	1.1e-176	99.0
1432585:1432600	attL	NA	NA	NA	NA
WP_023089303.1\|1432999_1433377_-	hypothetical protein	A0A0S4L3C3	Pseudomonas_phage	6.0e-57	98.4
WP_073656751.1\|1433380_1434562_-	peptidase	Q5ZQY0	Pseudomonas_phage	2.2e-169	96.2
WP_003152196.1\|1434849_1435422_-	phage virion morphogenesis protein	J9SN67	Pseudomonas_phage	1.6e-98	96.8
WP_033944953.1\|1435418_1436669_-\|head	phage head morphogenesis protein	J9SWK6	Pseudomonas_phage	9.4e-240	99.5
WP_003094242.1\|1436668_1438147_-	DUF935 family protein	A0A0S4L5M4	Pseudomonas_phage	7.1e-287	99.8
WP_074198507.1\|1438146_1439850_-	hypothetical protein	A0A0S4L072	Pseudomonas_phage	0.0e+00	99.8
WP_003094238.1\|1439851_1440427_-	DUF3486 family protein	J9SNV5	Pseudomonas_phage	7.4e-91	100.0
WP_003139994.1\|1440432_1440729_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	4.6e-52	100.0
WP_003094234.1\|1440730_1441120_-	hypothetical protein	A0A0S4L2V7	Pseudomonas_phage	5.2e-64	100.0
WP_023657073.1\|1441123_1441735_-	hypothetical protein	A0A0S4L1H0	Pseudomonas_phage	3.5e-99	97.5
WP_023657072.1\|1441915_1442545_-	transglycosylase SLT domain-containing protein	J9SHG5	Pseudomonas_phage	2.9e-120	100.0
WP_003094225.1\|1442702_1442960_-	membrane protein	A0A0S4L5C0	Pseudomonas_phage	7.2e-38	100.0
WP_023123664.1\|1444911_1445142_+	DNA-binding protein	J9RWM8	Pseudomonas_phage	3.2e-37	100.0
WP_023657615.1\|1445155_1445647_+	hypothetical protein	J9SGQ9	Pseudomonas_phage	2.1e-62	78.5
WP_023123663.1\|1445774_1446263_+	hypothetical protein	J9SHM0	Pseudomonas_phage	7.5e-92	100.0
WP_023123662.1\|1446255_1446516_+	hypothetical protein	J9SNT9	Pseudomonas_phage	9.3e-41	100.0
WP_023123661.1\|1446512_1446827_+	hypothetical protein	J9SUN0	Pseudomonas_phage	1.0e-49	99.0
WP_023657614.1\|1446836_1447811_+	hypothetical protein	J9SW46	Pseudomonas_phage	9.8e-152	98.7
WP_023657613.1\|1447814_1449599_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	J9SGQ3	Pseudomonas_phage	0.0e+00	97.8
WP_003094200.1\|1449598_1450765_+	AAA family ATPase	J9SHF3	Pseudomonas_phage	1.8e-216	100.0
WP_023657612.1\|1450766_1451108_+	hypothetical protein	J9RWC3	Pseudomonas_phage	1.3e-55	98.2
WP_014603990.1\|1451104_1451389_+	hypothetical protein	J9SGZ7	Pseudomonas_phage	3.4e-44	100.0
WP_088445835.1\|1452013_1452547_+	hypothetical protein	J9STN6	Pseudomonas_phage	1.9e-93	99.4
WP_034005528.1\|1452539_1452740_+	bacteriophage protein	A0A0S4L5A8	Pseudomonas_phage	1.5e-30	97.0
WP_034005529.1\|1452732_1453356_+	DUF3164 family protein	J9STG3	Pseudomonas_phage	7.8e-110	99.0
WP_034005532.1\|1453357_1454047_+	DUF2786 domain-containing protein	Q5ZR11	Pseudomonas_phage	9.4e-125	97.8
1453968:1453983	attR	NA	NA	NA	NA
WP_034005536.1\|1453970_1454429_+	hypothetical protein	Q5ZR12	Pseudomonas_phage	7.5e-70	84.9
WP_153574088.1\|1454430_1454601_+	hypothetical protein	J9STM8	Pseudomonas_phage	2.0e-12	54.8
WP_023657608.1\|1454587_1455151_+	regulatory protein GemA	Q5ZR14	Pseudomonas_phage	1.4e-97	97.3
WP_033894987.1\|1455153_1455516_+	hypothetical protein	A0A0S4L0M4	Pseudomonas_phage	2.8e-51	85.0

DBSCAN-SWA_5

1634263 : 1643291

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003098558.1\|1634263_1634899_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-40	52.3
WP_017148388.1\|1634944_1635838_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	3.0e-06	34.3
WP_003113871.1\|1635942_1636947_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	7.0e-36	37.3
WP_003092272.1\|1637373_1637697_-	Ferredoxin 1	NA	NA	NA	NA
WP_003122151.1\|1637763_1640331_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	2.4e-24	22.1
WP_003092262.1\|1641610_1642117_+	CinA family protein	B5TK85	Pseudomonas_phage	8.1e-57	76.0
WP_003092260.1\|1642250_1643291_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.5e-113	59.5

DBSCAN-SWA_6

2548375 : 2570389

Pseudomonas_phage(46.15%)

tRNA,integrase,protease,portal,capsid,terminase,head

attL 2548629:2548644|attR 2570749:2570764

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016562059.1\|2548375_2549356_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
2548629:2548644	attL	NA	NA	NA	NA
WP_031636940.1\|2549538_2550654_+\|integrase	site-specific integrase	A0A2K8I325	Pseudomonas_phage	3.1e-117	59.4
WP_003130859.1\|2550627_2550903_-	hypothetical protein	A0A2K8HN48	Pseudomonas_phage	3.4e-25	65.5
WP_124083289.1\|2551153_2551795_+	hypothetical protein	NA	NA	NA	NA
WP_023096380.1\|2551797_2553633_-	DNA cytosine methyltransferase	A0A1I9KFW0	Aeromonas_phage	2.6e-97	38.3
WP_023094641.1\|2553629_2554109_-	hypothetical protein	NA	NA	NA	NA
WP_023096381.1\|2554118_2554358_-	hypothetical protein	NA	NA	NA	NA
WP_023096382.1\|2554354_2554981_-	hypothetical protein	NA	NA	NA	NA
WP_019396880.1\|2555031_2555349_-	transcriptional regulator	NA	NA	NA	NA
WP_023096383.1\|2555345_2555576_-	hypothetical protein	NA	NA	NA	NA
WP_023096384.1\|2555726_2556020_-	hypothetical protein	NA	NA	NA	NA
WP_023096385.1\|2556029_2556341_-	hypothetical protein	NA	NA	NA	NA
WP_071534582.1\|2556613_2557354_-	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	6.5e-71	56.2
WP_078451084.1\|2557450_2557672_+	helix-turn-helix domain-containing protein	J7I423	Pseudomonas_phage	5.3e-13	65.5
WP_023103645.1\|2557977_2558532_+	hypothetical protein	NA	NA	NA	NA
WP_003130865.1\|2558524_2558734_+	hypothetical protein	NA	NA	NA	NA
WP_023103644.1\|2558730_2560944_+	toprim domain-containing protein	A0A2D1GN57	Marinobacter_phage	2.1e-189	48.2
WP_015649058.1\|2560940_2561312_+	hypothetical protein	NA	NA	NA	NA
WP_019726481.1\|2561883_2562234_+	hypothetical protein	B5TK61	Pseudomonas_phage	2.8e-16	48.6
WP_023096396.1\|2562230_2562968_+	hypothetical protein	A0A1B0Z000	Pseudomonas_phage	5.1e-44	47.1
WP_023103643.1\|2563223_2563814_+	hypothetical protein	A0A2H4JG15	uncultured_Caudovirales_phage	5.7e-46	53.9
WP_023103642.1\|2563817_2565833_+\|terminase	phage terminase large subunit family protein	A0A2H4J898	uncultured_Caudovirales_phage	5.0e-259	64.0
WP_004353026.1\|2565844_2566069_+	hypothetical protein	NA	NA	NA	NA
WP_023103641.1\|2566068_2567535_+\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	7.3e-175	64.4
WP_023103640.1\|2567518_2568691_+\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	1.3e-86	49.6
WP_023096402.1\|2568687_2569323_+\|head	head decoration protein	NA	NA	NA	NA
WP_019396968.1\|2569390_2570389_+\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	1.1e-121	64.7
2570749:2570764	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2822337 : 2829231

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023095477.1\|2822337_2823618_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.2e-98	45.4
WP_023095478.1\|2823619_2825017_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_023095479.1\|2825021_2825996_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_023095480.1\|2826083_2827067_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	1.2e-141	74.0
WP_023095481.1\|2827063_2827399_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.2e-37	68.5
WP_003090391.1\|2827395_2827701_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_003090389.1\|2827700_2828060_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.4e-34	61.7
WP_003090387.1\|2828056_2828452_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.7e-47	72.1
WP_003090386.1\|2828562_2829231_-	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.5e-90	82.1

DBSCAN-SWA_8

3319546 : 3363257

Pseudomonas_phage(90.91%)

integrase,transposase,head

attL 3339310:3339329|attR 3370638:3370657

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033967103.1\|3319546_3319771_-	hypothetical protein	A0A125RNE4	Pseudomonas_phage	6.1e-33	100.0
WP_087931010.1\|3319844_3320045_-	hypothetical protein	A0SMR1	Pseudomonas_virus	7.1e-25	90.9
WP_033967110.1\|3320059_3320362_-	hypothetical protein	A0A0S4L5F0	Pseudomonas_phage	2.6e-50	99.0
WP_033967112.1\|3320361_3321207_-	hypothetical protein	I6P8E4	Pseudomonas_phage	3.7e-155	96.4
WP_033967113.1\|3321203_3323414_-	bacteriophage protein	Q5ZQV9	Pseudomonas_phage	0.0e+00	97.4
WP_003094285.1\|3323627_3323858_-	hypothetical protein	Q5ZQW1	Pseudomonas_phage	1.2e-36	100.0
WP_033967114.1\|3323867_3324686_-	DUF2163 domain-containing protein	Q5ZQW2	Pseudomonas_phage	1.7e-165	98.9
WP_034065886.1\|3324672_3326379_-	hypothetical protein	Q5ZQW3	Pseudomonas_phage	0.0e+00	98.9
WP_033938092.1\|3326381_3327305_-	hypothetical protein	J9SWM3	Pseudomonas_phage	3.6e-180	95.8
WP_033938093.1\|3327307_3328267_-	hypothetical protein	J9RWP3	Pseudomonas_phage	1.1e-187	97.5
WP_033938094.1\|3328266_3331899_-	tape measure protein	J9SH65	Pseudomonas_phage	0.0e+00	95.4
WP_049967619.1\|3332015_3332198_+	hypothetical protein	J9SNJ6	Pseudomonas_phage	1.2e-26	100.0
WP_034065888.1\|3332152_3332635_-	hypothetical protein	J9STT8	Pseudomonas_phage	8.2e-83	99.4
WP_010791812.1\|3332637_3333378_-	hypothetical protein	J9SVZ4	Pseudomonas_phage	1.2e-136	100.0
WP_003127509.1\|3333384_3333588_-	hypothetical protein	J9RWG5	Pseudomonas_phage	1.7e-29	100.0
WP_003127511.1\|3333584_3334037_-	hypothetical protein	J9SH57	Pseudomonas_phage	5.5e-81	100.0
WP_003121492.1\|3334033_3334549_-	DUF1320 domain-containing protein	J9SNI4	Pseudomonas_phage	3.5e-92	100.0
WP_023118677.1\|3334551_3334767_-	hypothetical protein	J9STT1	Pseudomonas_phage	4.5e-33	98.6
WP_003127513.1\|3334998_3335895_-\|head	head protein	J9SVY7	Pseudomonas_phage	1.3e-171	100.0
WP_003121593.1\|3335909_3336314_-	hypothetical protein	J9RWG0	Pseudomonas_phage	1.8e-67	100.0
WP_033967120.1\|3336319_3337429_-	bacteriophage protein	J9SH47	Pseudomonas_phage	3.4e-201	99.5
WP_023081739.1\|3337639_3338215_-	phage virion morphogenesis protein	J9SNH3	Pseudomonas_phage	1.2e-104	100.0
WP_023081740.1\|3338216_3339455_-	hypothetical protein	J9STS2	Pseudomonas_phage	3.1e-243	100.0
3339310:3339329	attL	NA	NA	NA	NA
WP_079388514.1\|3339444_3341010_-	DUF935 domain-containing protein	J9SVY0	Pseudomonas_phage	2.9e-286	96.0
WP_023123671.1\|3341012_3342686_-	hypothetical protein	J9RWF2	Pseudomonas_phage	0.0e+00	99.5
WP_003117313.1\|3342687_3343236_-	DUF3486 family protein	J9SH37	Pseudomonas_phage	7.6e-77	99.5
WP_003117314.1\|3343238_3343541_-	hypothetical protein	J9SNG3	Pseudomonas_phage	1.1e-48	100.0
WP_003117315.1\|3343537_3343858_-	DUF2730 family protein	J9STR5	Pseudomonas_phage	5.1e-49	100.0
WP_003126999.1\|3343857_3344481_-	hypothetical protein	J9SVX5	Pseudomonas_phage	4.1e-103	94.2
WP_079388513.1\|3344467_3344680_-	hypothetical protein	Q5ZQZ0	Pseudomonas_phage	1.5e-28	92.9
WP_010791818.1\|3344676_3345306_-	transglycosylase SLT domain-containing protein	J9SH25	Pseudomonas_phage	2.2e-120	99.5
WP_003138152.1\|3345463_3345721_-	membrane protein	J9STQ9	Pseudomonas_phage	5.6e-38	100.0
WP_033967124.1\|3345911_3346415_-	hypothetical protein	J9RWD8	Pseudomonas_phage	2.0e-79	92.8
WP_033967132.1\|3346431_3346770_-	helix-turn-helix domain-containing protein	J9SH16	Pseudomonas_phage	1.2e-11	80.4
WP_015649394.1\|3347390_3347615_-	hypothetical protein	NA	NA	NA	NA
WP_033967144.1\|3347738_3348227_+	hypothetical protein	J9SHM0	Pseudomonas_phage	2.2e-91	99.4
WP_023132007.1\|3348219_3348480_+	hypothetical protein	J9STH6	Pseudomonas_phage	2.1e-40	98.8
WP_023132008.1\|3348476_3348791_+	hypothetical protein	J9SVM2	Pseudomonas_phage	4.1e-51	100.0
WP_033967145.1\|3348800_3349775_+	hypothetical protein	J9RW58	Pseudomonas_phage	8.0e-154	98.1
WP_033967146.1\|3349778_3351563_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	J9SGQ3	Pseudomonas_phage	0.0e+00	99.3
WP_033967147.1\|3351562_3352729_+	AAA family ATPase	J9SHF3	Pseudomonas_phage	2.6e-215	99.7
WP_033967149.1\|3352730_3353072_+	hypothetical protein	J9RWC3	Pseudomonas_phage	3.3e-54	95.6
WP_014603990.1\|3353068_3353353_+	hypothetical protein	J9SGZ7	Pseudomonas_phage	3.4e-44	100.0
WP_033967151.1\|3353352_3354033_+	hypothetical protein	J9SNC1	Pseudomonas_phage	4.0e-128	98.2
WP_033967153.1\|3354022_3354553_+	hypothetical protein	J9STN6	Pseudomonas_phage	4.2e-88	98.2
WP_033967154.1\|3354577_3355096_+	host-nuclease inhibitor protein Gam	H6V8L7	Pseudomonas_phage	4.5e-87	94.8
WP_033967155.1\|3355097_3355787_+	DUF2786 domain-containing protein	J9SGY5	Pseudomonas_phage	2.1e-124	98.3
WP_016852434.1\|3355788_3355980_+	hypothetical protein	J9RW45	Pseudomonas_phage	5.0e-28	100.0
WP_033967157.1\|3355979_3356447_+	hypothetical protein	Q5ZR13	Pseudomonas_phage	1.2e-59	80.0
WP_033967158.1\|3356433_3357000_+	regulatory protein GemA	J9SVT5	Pseudomonas_phage	3.5e-101	98.9
WP_033967160.1\|3356999_3357548_+	hypothetical protein	J9RWB3	Pseudomonas_phage	6.6e-97	98.9
WP_003127781.1\|3357544_3357913_+	hypothetical protein	J9SGX4	Pseudomonas_phage	1.1e-63	100.0
WP_003131782.1\|3358820_3359249_-	hypothetical protein	NA	NA	NA	NA
WP_003131783.1\|3359536_3360391_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003131784.1\|3360403_3361096_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	5.1e-102	78.1
WP_003112098.1\|3361107_3361578_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	1.3e-53	69.2
WP_003122742.1\|3361609_3362893_-	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	8.9e-169	72.8
WP_003089312.1\|3362906_3363257_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	6.6e-34	62.5
3370638:3370657	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3458120 : 3528558

Salmonella_phage(20.0%)

integrase,transposase,bacteriocin

attL 3455677:3455695|attR 3480345:3480363

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3455677:3455695	attL	NA	NA	NA	NA
WP_003117278.1\|3458120_3461138_-\|transposase	Tn3-like element ISPa42 family transposase	A0A1B0V7H9	Salmonella_phage	7.2e-76	26.6
WP_003111043.1\|3461432_3461795_+	hypothetical protein	NA	NA	NA	NA
WP_003120171.1\|3461974_3462439_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003120172.1\|3462446_3463352_-	EamA family transporter	NA	NA	NA	NA
WP_003111046.1\|3463348_3464077_-	hypothetical protein	NA	NA	NA	NA
WP_012075823.1\|3464092_3465502_-	homospermidine synthase	B2ZXX8	Ralstonia_phage	1.2e-94	39.1
WP_003111048.1\|3465913_3467230_-	three-Cys-motif partner protein TcmP	NA	NA	NA	NA
WP_003111049.1\|3467251_3467995_-	phage Gp37/Gp68 family protein	A0A2P1A0W3	Gordonia_phage	1.8e-60	45.5
WP_003111050.1\|3468024_3468996_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_003111051.1\|3469176_3470178_+	DNA-binding protein	NA	NA	NA	NA
WP_023980678.1\|3470174_3470438_+	hypothetical protein	NA	NA	NA	NA
WP_023095636.1\|3470764_3471742_-	AAA family ATPase	NA	NA	NA	NA
WP_023095637.1\|3471731_3473393_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_023095638.1\|3473373_3473949_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	8.9e-44	53.3
WP_023980443.1\|3475681_3476629_+	S-type Pyocin	NA	NA	NA	NA
WP_023095640.1\|3476631_3476889_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_023095641.1\|3476987_3477314_+	hypothetical protein	NA	NA	NA	NA
WP_023095642.1\|3477310_3477682_+	hypothetical protein	NA	NA	NA	NA
WP_023095643.1\|3478633_3479080_+	hypothetical protein	NA	NA	NA	NA
WP_078451883.1\|3479094_3480960_-	S9 family peptidase	NA	NA	NA	NA
3480345:3480363	attR	NA	NA	NA	NA
WP_071536849.1\|3481562_3482093_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_023095645.1\|3482502_3485619_-	multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.7e-48	21.8
WP_049875008.1\|3485628_3486810_-	efflux RND transporter periplasmic adaptor subunit	S5VL44	Leptospira_phage	1.2e-05	23.9
WP_023095647.1\|3487063_3488659_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.0e-20	33.5
WP_023095648.1\|3488658_3489684_-	ABC transporter permease	NA	NA	NA	NA
WP_023095649.1\|3489683_3490754_-	microcin C ABC transporter permease YejB	NA	NA	NA	NA
WP_023095650.1\|3490753_3492679_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_023095651.1\|3492799_3495493_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	2.9e-36	24.0
WP_023095652.1\|3495660_3496062_-	biopolymer transporter ExbD	NA	NA	NA	NA
WP_023095653.1\|3496063_3496771_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_023095654.1\|3496816_3497620_-	energy transducer TonB	NA	NA	NA	NA
WP_023095655.1\|3498408_3500235_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.4e-26	29.7
WP_023095656.1\|3500318_3501662_-	hypothetical protein	NA	NA	NA	NA
WP_031277719.1\|3503808_3504591_-	SDR family oxidoreductase	F2NZ12	Diadromus_pulchellus_ascovirus	1.3e-05	27.4
WP_003131969.1\|3504675_3505110_-	mercury resistance transcriptional regulator MerR	NA	NA	NA	NA
WP_003131974.1\|3505181_3505532_+	mercuric ion transporter MerT	NA	NA	NA	NA
WP_003131987.1\|3505544_3505820_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_003156770.1\|3505891_3507577_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	5.5e-41	29.3
WP_000995360.1\|3507594_3507960_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_003132004.1\|3507956_3508193_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_003132006.1\|3508189_3509179_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_003124096.1\|3509309_3509870_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	2.1e-50	88.6
WP_001138070.1\|3509872_3512839_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	72.9
WP_023095659.1\|3513863_3514193_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_031636570.1\|3514383_3515526_+	hypothetical protein	NA	NA	NA	NA
WP_023095661.1\|3515527_3515761_+	hypothetical protein	NA	NA	NA	NA
WP_153274397.1\|3515849_3516020_+	hypothetical protein	NA	NA	NA	NA
WP_023095663.1\|3516007_3516244_+	hypothetical protein	NA	NA	NA	NA
WP_023095664.1\|3516243_3516507_+	hypothetical protein	NA	NA	NA	NA
WP_023095665.1\|3516506_3516815_+	hypothetical protein	NA	NA	NA	NA
WP_157738137.1\|3517264_3518137_+	hypothetical protein	NA	NA	NA	NA
WP_088445837.1\|3520284_3520596_+	hypothetical protein	NA	NA	NA	NA
WP_023095091.1\|3524096_3525533_-	protein kinase	O56348	Spodoptera_litura_multicapsid_nucleopolyhedrovirus	4.1e-05	32.1
WP_023095090.1\|3525538_3526234_-	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_023095089.1\|3526233_3526899_-	VWA domain-containing protein	NA	NA	NA	NA
WP_087930941.1\|3527098_3527299_-	hypothetical protein	NA	NA	NA	NA
WP_010794468.1\|3527331_3528558_+\|transposase	IS256-like element ISPa1328 family transposase	A0A218MNI5	uncultured_virus	8.0e-50	47.1

DBSCAN-SWA_10

3603474 : 3617453

Pseudomonas_phage(94.44%)

integrase

attL 3604846:3604861|attR 3620102:3620117

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052156016.1\|3603474_3603885_-	hypothetical protein	A0A125RNP8	Pseudomonas_phage	6.6e-25	50.9
WP_157738150.1\|3603881_3604145_-	hypothetical protein	A0A0A1IUZ6	Pseudomonas_phage	1.5e-17	77.4
3604846:3604861	attL	NA	NA	NA	NA
WP_003085700.1\|3606182_3606521_+	hypothetical protein	NA	NA	NA	NA
WP_107236447.1\|3606573_3606651_-	hypothetical protein	NA	NA	NA	NA
WP_003085698.1\|3606841_3607228_+	helix-turn-helix transcriptional regulator	A0A1W6JTA9	Pseudomonas_phage	8.3e-54	95.8
WP_014603617.1\|3607230_3607464_+	hypothetical protein	A0A0A0YQ28	Pseudomonas_phage	1.5e-37	98.7
WP_003085694.1\|3607563_3607818_+	hypothetical protein	A0A0A0YUF2	Pseudomonas_phage	3.8e-39	100.0
WP_087931000.1\|3608692_3608923_+	Arc family DNA-binding protein	A0A1W6JTB4	Pseudomonas_phage	5.9e-31	91.9
WP_157738151.1\|3609333_3609885_-	hypothetical protein	NA	NA	NA	NA
WP_088445853.1\|3610234_3610597_+	hypothetical protein	A0A0A0YR62	Pseudomonas_phage	1.9e-20	96.0
WP_087931002.1\|3610896_3611616_+	hypothetical protein	A0A1W6JTE0	Pseudomonas_phage	2.5e-120	92.9
WP_025991893.1\|3611608_3611938_+	hypothetical protein	A0A1W6JT94	Pseudomonas_phage	2.4e-57	97.2
WP_088445854.1\|3612080_3613235_+\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	4.6e-209	97.1
WP_014603615.1\|3613324_3613768_+	SocA family protein	I6R0L8	Salmonella_phage	4.3e-46	56.8
WP_019486480.1\|3614501_3614726_-	hypothetical protein	A0A1W6JT95	Pseudomonas_phage	4.7e-33	98.6
WP_019486481.1\|3614798_3615038_-	hypothetical protein	A0A0A0YQ17	Pseudomonas_phage	5.0e-33	92.2
WP_023103826.1\|3615034_3615337_-	hypothetical protein	A0A0A0YUD8	Pseudomonas_phage	1.4e-48	98.0
WP_003129767.1\|3615892_3616174_-	hypothetical protein	A0A0A0YR51	Pseudomonas_phage	2.5e-44	96.8
WP_087930962.1\|3616173_3616734_-	hypothetical protein	A0A1B0YZW5	Pseudomonas_phage	5.0e-100	99.5
WP_003159082.1\|3616738_3616930_-	hypothetical protein	A0A1B0Z2L3	Pseudomonas_phage	3.5e-29	98.4
WP_088445855.1\|3616922_3617453_-	hypothetical protein	A0A1W6JT86	Pseudomonas_phage	7.3e-93	97.2
3620102:3620117	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3627698 : 3672262

Pseudomonas_phage(78.43%)

lysis,integrase,capsid,terminase,tail

attL 3620102:3620117|attR 3636699:3636714

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3620102:3620117	attL	NA	NA	NA	NA
WP_124214709.1\|3627698_3630242_+	hypothetical protein	A0A193GZ61	Enterobacter_phage	1.9e-199	45.1
WP_033991072.1\|3633163_3634381_-\|integrase	site-specific integrase	A0A125RNP5	Pseudomonas_phage	5.6e-229	98.8
WP_079387832.1\|3634983_3635196_-	hypothetical protein	B5WZV2	Pseudomonas_phage	8.1e-27	87.1
WP_052156016.1\|3635327_3635738_-	hypothetical protein	A0A125RNP8	Pseudomonas_phage	6.6e-25	50.9
WP_033991076.1\|3635734_3635944_-	hypothetical protein	A0A0A1IUZ6	Pseudomonas_phage	1.7e-24	78.3
WP_033991121.1\|3635940_3636243_-	hypothetical protein	V5K386	Pseudomonas_phage	8.0e-28	59.8
WP_033991077.1\|3636456_3636774_-	hypothetical protein	A0A0U4JVQ0	Pseudomonas_phage	1.7e-52	95.2
3636699:3636714	attR	NA	NA	NA	NA
WP_087930990.1\|3636818_3637082_-	hypothetical protein	W6MVL9	Pseudomonas_phage	3.1e-28	93.3
WP_052156017.1\|3637084_3637666_-	hypothetical protein	D4FUM1	Pseudomonas_phage	1.8e-23	45.7
WP_003088357.1\|3639138_3639345_-	hypothetical protein	H2BDF2	Pseudomonas_virus	6.0e-27	84.1
WP_003140730.1\|3639708_3640044_-	LytTR family transcriptional regulator	Q9MC72	Pseudomonas_phage	2.1e-45	82.9
WP_023083007.1\|3640040_3640685_-	hypothetical protein	F8TUK8	EBPR_podovirus	1.0e-24	36.0
WP_087930989.1\|3640681_3641431_-	single-stranded DNA-binding protein	A0A125RNR3	Pseudomonas_phage	2.0e-56	54.8
WP_087930988.1\|3641439_3642504_-	hypothetical protein	B5WZW5	Pseudomonas_phage	8.7e-85	96.6
WP_079387831.1\|3642823_3643501_-	DNA cytosine methyltransferase	A0A0H5AU88	Pseudomonas_phage	7.4e-90	71.1
WP_033991082.1\|3643620_3643920_-	hypothetical protein	A0A0S2SY04	Pseudomonas_phage	1.3e-22	55.4
WP_033991083.1\|3643916_3644483_-	hypothetical protein	A0A291I9C8	Pseudomonas_phage	5.9e-48	54.8
WP_033991085.1\|3644479_3644845_-	hypothetical protein	W6MYA8	Pseudomonas_phage	5.8e-65	97.5
WP_124214714.1\|3644841_3645144_-	hypothetical protein	NA	NA	NA	NA
WP_154112659.1\|3645416_3645593_-	hypothetical protein	NA	NA	NA	NA
WP_124214713.1\|3645721_3645955_-	hypothetical protein	NA	NA	NA	NA
WP_015649351.1\|3646562_3646769_-	hypothetical protein	A0A0U4IJ22	Pseudomonas_phage	3.9e-34	97.1
WP_033979602.1\|3646779_3646986_-	hypothetical protein	A0A0U4B0I0	Pseudomonas_phage	7.6e-30	97.1
WP_087930987.1\|3647390_3648164_-	helix-turn-helix transcriptional regulator	W6MVG5	Pseudomonas_phage	1.2e-144	99.2
WP_031672707.1\|3648204_3648408_+	helix-turn-helix domain-containing protein	W6MWX8	Pseudomonas_phage	8.8e-31	100.0
WP_033944536.1\|3648421_3648610_+	hypothetical protein	NA	NA	NA	NA
WP_033944537.1\|3648628_3648826_+	hypothetical protein	NA	NA	NA	NA
WP_087930986.1\|3648900_3649710_+	hypothetical protein	B5WZX9	Pseudomonas_phage	4.3e-145	95.5
WP_087930985.1\|3649709_3650360_+	Replication protein P	W6MVG8	Pseudomonas_phage	2.5e-119	99.5
WP_087930984.1\|3650505_3650721_+	hypothetical protein	W6MW49	Pseudomonas_phage	5.9e-33	93.0
WP_023465449.1\|3650713_3651130_+	hypothetical protein	B5WZY4	Pseudomonas_phage	2.2e-76	99.3
WP_023085160.1\|3651126_3651390_+	hypothetical protein	A0A125RNK6	Pseudomonas_phage	2.5e-41	94.2
WP_023085161.1\|3651386_3651701_+	DUF968 domain-containing protein	NA	NA	NA	NA
WP_023085162.1\|3651774_3651969_+	hypothetical protein	NA	NA	NA	NA
WP_034068311.1\|3652230_3652464_+	hypothetical protein	NA	NA	NA	NA
WP_017001699.1\|3652460_3652661_+	hypothetical protein	NA	NA	NA	NA
WP_058199627.1\|3652657_3653122_+	hypothetical protein	Q858D2	Salmonella_phage	9.7e-57	74.0
WP_058147472.1\|3653118_3653409_+	hypothetical protein	Q6J1P1	Burkholderia_virus	3.4e-28	71.6
WP_087930983.1\|3653408_3654542_+	oxidoreductase	A0A220IHC1	Escherichia_phage	2.6e-79	42.1
WP_023085169.1\|3654538_3654937_+	hypothetical protein	A0A1W6JTD2	Pseudomonas_phage	5.4e-32	52.0
WP_124214712.1\|3654933_3655113_+	hypothetical protein	NA	NA	NA	NA
WP_087930982.1\|3655223_3655589_+	hypothetical protein	A0A2H4J3Y5	uncultured_Caudovirales_phage	7.1e-39	68.9
WP_087930981.1\|3655697_3656090_+	hypothetical protein	W6MYB2	Pseudomonas_phage	2.5e-66	99.2
WP_087930980.1\|3656086_3656521_+	lysozyme	A0A0S2SYD0	Pseudomonas_phage	8.5e-31	49.3
WP_087930979.1\|3656761_3657133_+\|lysis	lysis protein	W6MYB3	Pseudomonas_phage	1.0e-56	95.1
WP_023085174.1\|3657129_3657360_+	hypothetical protein	NA	NA	NA	NA
WP_023085175.1\|3657363_3657810_+	hypothetical protein	W6MWW3	Pseudomonas_phage	1.3e-79	100.0
WP_087931012.1\|3657835_3659260_+\|terminase	terminase	W6MW26	Pseudomonas_phage	4.4e-286	99.6
WP_023465464.1\|3659271_3659526_+	hypothetical protein	W6MVK3	Pseudomonas_phage	2.5e-35	98.8
WP_087931011.1\|3659527_3661216_+\|tail	phage tail protein	W6MYA0	Pseudomonas_phage	0.0e+00	98.8
WP_023085179.1\|3661216_3661528_+	hypothetical protein	W6MVD5	Pseudomonas_phage	2.6e-50	98.1
WP_087930978.1\|3661524_3662133_+	peptidase	W6MWW5	Pseudomonas_phage	2.6e-62	97.6
WP_087930977.1\|3662148_3663144_+\|capsid	phage capsid protein	T1S9H9	Salmonella_phage	2.2e-122	62.5
WP_087930976.1\|3663156_3663549_+	hypothetical protein	T1SA71	Salmonella_phage	1.2e-44	72.9
WP_087930975.1\|3663541_3663784_+	hypothetical protein	NA	NA	NA	NA
WP_087930974.1\|3663838_3664468_+	hypothetical protein	W6MVD9	Pseudomonas_phage	9.9e-113	97.1
WP_087930973.1\|3664464_3666804_+	hypothetical protein	W6MWW6	Pseudomonas_phage	0.0e+00	99.0
WP_087930972.1\|3666784_3667264_+	hypothetical protein	W6MW30	Pseudomonas_phage	2.5e-84	96.2
WP_087930971.1\|3667248_3667722_+	hypothetical protein	W6MVK9	Pseudomonas_phage	1.9e-68	91.1
WP_087930970.1\|3667721_3669758_+	hypothetical protein	W6MYA2	Pseudomonas_phage	2.9e-57	40.7
WP_157738152.1\|3669754_3670312_+	hypothetical protein	A0A2H4J9W0	uncultured_Caudovirales_phage	6.0e-21	38.5
WP_157738153.1\|3670658_3671675_+	hypothetical protein	W6MVE3	Pseudomonas_phage	1.1e-20	34.1
WP_157738154.1\|3671674_3672262_+	hypothetical protein	A0A193GZ61	Enterobacter_phage	7.2e-33	45.5

DBSCAN-SWA_12

4900076 : 4908946

Pseudomonas_phage(90.91%)

integrase,coat,tRNA

attL 4892163:4892179|attR 4917707:4917723

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4892163:4892179	attL	NA	NA	NA	NA
WP_023095935.1\|4900076_4900901_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	3.1e-106	73.7
WP_012614375.1\|4901006_4902023_-\|integrase	tyrosine-type recombinase/integrase	Q56VN7	Pseudomonas_phage	5.0e-191	99.7
WP_023095936.1\|4902022_4903315_-	hypothetical protein	Q56VN8	Pseudomonas_phage	1.0e-252	96.5
WP_023095937.1\|4903543_4904818_-	hypothetical protein	Q56VN9	Pseudomonas_phage	4.4e-200	87.3
WP_003114150.1\|4904821_4905178_-	DUF2523 domain-containing protein	Q56VP0	Pseudomonas_phage	7.9e-59	100.0
WP_031636684.1\|4905182_4906490_-	hypothetical protein	Q56VP1	Pseudomonas_phage	3.5e-51	56.6
WP_003125072.1\|4906641_4906890_-\|coat	phage coat protein B	Q56VP2	Pseudomonas_phage	2.0e-32	92.7
WP_003115979.1\|4906902_4907154_-	hypothetical protein	NA	NA	NA	NA
WP_003115130.1\|4907166_4907259_-	hypothetical protein	Q56VP4	Pseudomonas_phage	7.3e-09	100.0
WP_023087663.1\|4907275_4907710_-	hypothetical protein	Q56VP5	Pseudomonas_phage	7.1e-62	98.6
WP_031636686.1\|4908220_4908508_-	hypothetical protein	Q56VP7	Pseudomonas_phage	2.6e-52	94.7
WP_031636688.1\|4908506_4908725_+	hypothetical protein	NA	NA	NA	NA
WP_022581007.1\|4908730_4908946_-	DNA-binding protein	Q56VP9	Pseudomonas_phage	1.4e-34	93.0
4917707:4917723	attR	NA	NA	NA	NA

DBSCAN-SWA_13

5299668 : 5365476

Pseudomonas_phage(91.67%)

lysis,integrase,protease,portal,terminase,holin

attL 5319574:5319601|attR 5360978:5361005

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031636718.1\|5299668_5301861_+\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
WP_003134321.1\|5301878_5302502_+	phospholipase C accessory protein PlcR	NA	NA	NA	NA
WP_003085828.1\|5302589_5303810_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_003085826.1\|5303813_5304773_-	DegV family protein	NA	NA	NA	NA
WP_003085824.1\|5304963_5306076_-	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_003085819.1\|5306116_5306707_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_003109429.1\|5306859_5307342_-	glutathione peroxidase	NA	NA	NA	NA
WP_003085816.1\|5307547_5308033_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_003109430.1\|5308001_5308340_+	DUF3565 domain-containing protein	NA	NA	NA	NA
WP_003085814.1\|5308339_5309524_+	acetate kinase	NA	NA	NA	NA
WP_003085813.1\|5309586_5311701_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_023096033.1\|5311827_5312742_+	acyltransferase	NA	NA	NA	NA
WP_003085808.1\|5312811_5313525_-	OmpA family protein	NA	NA	NA	NA
WP_003085806.1\|5313630_5314272_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_003114220.1\|5314373_5315393_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_003109433.1\|5315517_5316351_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_003085798.1\|5316485_5317427_-	alpha/beta hydrolase	A0A1D8EUH4	Mycobacterium_phage	4.4e-08	33.3
WP_003085795.1\|5317535_5318219_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_023096034.1\|5318306_5319185_+	hypothetical protein	NA	NA	NA	NA
5319574:5319601	attL	NA	NA	NA	NA
WP_019486480.1\|5319821_5320046_-	hypothetical protein	A0A1W6JT95	Pseudomonas_phage	4.7e-33	98.6
WP_019486481.1\|5320118_5320358_-	hypothetical protein	A0A0A0YQ17	Pseudomonas_phage	5.0e-33	92.2
WP_023103826.1\|5320354_5320657_-	hypothetical protein	A0A0A0YUD8	Pseudomonas_phage	1.4e-48	98.0
WP_003129767.1\|5321212_5321494_-	hypothetical protein	A0A0A0YR51	Pseudomonas_phage	2.5e-44	96.8
WP_087930962.1\|5321493_5322054_-	hypothetical protein	A0A1B0YZW5	Pseudomonas_phage	5.0e-100	99.5
WP_003159082.1\|5322058_5322250_-	hypothetical protein	A0A1B0Z2L3	Pseudomonas_phage	3.5e-29	98.4
WP_023132450.1\|5322242_5322830_-	hypothetical protein	A0A1B0Z051	Pseudomonas_phage	1.2e-104	95.9
WP_023132449.1\|5322851_5324345_-	hypothetical protein	A0A1B0YZU9	Pseudomonas_phage	8.5e-288	99.6
WP_031634609.1\|5324331_5324754_-	hypothetical protein	A0A1B0YZV1	Pseudomonas_phage	2.0e-69	98.6
WP_034006700.1\|5324766_5325312_-	hypothetical protein	A0A0A0YWE1	Pseudomonas_phage	2.3e-94	95.0
WP_087930993.1\|5325311_5325722_-	hypothetical protein	A0A1B0YZV0	Pseudomonas_phage	2.1e-63	94.9
WP_003129730.1\|5325724_5327422_-	hypothetical protein	A0A1W6JTA3	Pseudomonas_phage	0.0e+00	98.1
WP_003159076.1\|5327421_5327943_-	hypothetical protein	A0A1W6JT98	Pseudomonas_phage	3.1e-96	96.5
WP_087930994.1\|5327982_5330466_-	tape measure protein	A0A1B0YZV6	Pseudomonas_phage	0.0e+00	97.6
WP_003129708.1\|5330568_5330871_-	hypothetical protein	A0A1B0YZV7	Pseudomonas_phage	5.3e-40	86.0
WP_087930995.1\|5330928_5331456_-	DUF4124 domain-containing protein	A0A1B0Z2K9	Pseudomonas_phage	1.9e-93	98.9
WP_050397059.1\|5331527_5332049_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	A0A1B0YZT9	Pseudomonas_phage	1.8e-91	99.4
WP_010791967.1\|5332130_5332883_-	hypothetical protein	A0A1W6JT83	Pseudomonas_phage	9.6e-139	100.0
WP_010791968.1\|5332884_5333079_-	hypothetical protein	A0A1W6JT79	Pseudomonas_phage	3.0e-28	100.0
WP_010791969.1\|5333082_5333553_-	hypothetical protein	A0A1W6JT75	Pseudomonas_phage	2.2e-88	100.0
WP_010791970.1\|5333549_5333879_-	hypothetical protein	A0A1W6JT71	Pseudomonas_phage	3.1e-57	100.0
WP_003129701.1\|5333875_5334193_-	DUF2190 family protein	A0A1W6JT93	Pseudomonas_phage	4.6e-50	100.0
WP_023465050.1\|5334259_5336353_-\|protease	Clp protease ClpP	A0A1W6JT88	Pseudomonas_phage	0.0e+00	98.4
WP_019486499.1\|5336312_5337959_-\|portal	phage portal protein	A0A1W6JTB6	Pseudomonas_phage	0.0e+00	99.8
WP_003159069.1\|5337958_5338174_-	hypothetical protein	A0A1W6JT66	Pseudomonas_phage	6.5e-32	100.0
WP_023086966.1\|5338164_5340129_-\|terminase	phage terminase large subunit family protein	A0A1B0Z2K0	Pseudomonas_phage	0.0e+00	98.3
WP_003159067.1\|5340100_5340646_-	DNA packaging dimer small subunit	A0A1B0Z033	Pseudomonas_phage	2.1e-95	98.9
WP_023103672.1\|5340765_5341509_-	hypothetical protein	A0A1B0Z000	Pseudomonas_phage	2.7e-133	98.0
WP_087930996.1\|5341505_5341976_-\|lysis	lysis protein	A0A1B0Z001	Pseudomonas_phage	4.5e-70	91.0
WP_019486502.1\|5341972_5342215_-	hypothetical protein	A0A0H5AWC3	Pseudomonas_phage	2.9e-20	53.2
WP_087930997.1\|5342211_5342829_-	glycoside hydrolase family 19 protein	A0A1B0Z086	Pseudomonas_phage	1.0e-109	95.1
WP_004353177.1\|5342825_5343158_-\|holin	phage holin, lambda family	A0A1W6JTC7	Pseudomonas_phage	1.9e-54	96.4
WP_003085732.1\|5343241_5343772_-	hypothetical protein	A0A2D1GLJ3	Escherichia_phage	1.2e-26	37.3
WP_087930998.1\|5344300_5344858_-	hypothetical protein	A0A0A0YRV6	Pseudomonas_phage	1.5e-72	93.6
WP_023835928.1\|5344854_5345139_-	hypothetical protein	A0A1W6JTC1	Pseudomonas_phage	1.4e-42	98.9
WP_033944544.1\|5345135_5346533_-	AAA family ATPase	A0A1W6JTB3	Pseudomonas_phage	1.5e-262	98.5
WP_052150979.1\|5346529_5347150_-	AAA family ATPase	A0A1W6JTD8	Pseudomonas_phage	6.5e-109	99.0
WP_033944546.1\|5347325_5348165_-	helix-turn-helix domain-containing protein	A0A1W6JTD5	Pseudomonas_phage	9.7e-148	94.6
WP_023124259.1\|5348161_5348392_-	hypothetical protein	A0A1W6JTF8	Pseudomonas_phage	2.0e-39	98.7
WP_087930999.1\|5348388_5349159_-	phage antirepressor protein	A0A2H4J5H6	uncultured_Caudovirales_phage	4.9e-45	45.2
WP_003123991.1\|5349155_5349389_-	hypothetical protein	A0A0A0YRU7	Pseudomonas_phage	3.7e-33	97.4
WP_079389863.1\|5349381_5349573_-	hypothetical protein	A0A0A0YR77	Pseudomonas_phage	1.3e-15	74.2
WP_033944552.1\|5349656_5349965_-	hypothetical protein	A0A0A0YWH5	Pseudomonas_phage	4.2e-48	98.0
WP_019396627.1\|5349961_5350240_-	hypothetical protein	A0A1W6JTC3	Pseudomonas_phage	4.9e-40	97.8
WP_019396628.1\|5350236_5350587_-	hypothetical protein	NA	NA	NA	NA
WP_010791994.1\|5350774_5350996_+	hypothetical protein	NA	NA	NA	NA
WP_125176724.1\|5350967_5351396_+	hypothetical protein	NA	NA	NA	NA
WP_003085702.1\|5351690_5352476_+	helix-turn-helix transcriptional regulator	A0A2K8HKD5	Pseudomonas_phage	6.4e-77	81.4
WP_019396631.1\|5352588_5352882_+	hypothetical protein	NA	NA	NA	NA
WP_003085700.1\|5352899_5353238_+	hypothetical protein	NA	NA	NA	NA
WP_107236447.1\|5353290_5353368_-	hypothetical protein	NA	NA	NA	NA
WP_003085698.1\|5353558_5353945_+	helix-turn-helix transcriptional regulator	A0A1W6JTA9	Pseudomonas_phage	8.3e-54	95.8
WP_014603617.1\|5353947_5354181_+	hypothetical protein	A0A0A0YQ28	Pseudomonas_phage	1.5e-37	98.7
WP_003085694.1\|5354280_5354535_+	hypothetical protein	A0A0A0YUF2	Pseudomonas_phage	3.8e-39	100.0
WP_003085692.1\|5354531_5355368_+	prohibitin family protein	A0A0A0YRT7	Pseudomonas_phage	1.0e-128	100.0
WP_087931000.1\|5355409_5355640_+	Arc family DNA-binding protein	A0A1W6JTB4	Pseudomonas_phage	5.9e-31	91.9
WP_087931001.1\|5355642_5355978_+	hypothetical protein	A0A1W6JTA6	Pseudomonas_phage	2.4e-49	90.1
WP_079380324.1\|5356378_5356795_+	hypothetical protein	A0A0A0YUE9	Pseudomonas_phage	4.9e-68	97.7
WP_051677900.1\|5356791_5357319_+	hypothetical protein	A0A0A0YRT2	Pseudomonas_phage	1.2e-50	98.0
WP_003085682.1\|5357431_5357623_+	hypothetical protein	A0A0A0YQ21	Pseudomonas_phage	9.2e-30	100.0
WP_087931002.1\|5357619_5358339_+	hypothetical protein	A0A1W6JTE0	Pseudomonas_phage	2.5e-120	92.9
WP_025991893.1\|5358331_5358661_+	hypothetical protein	A0A1W6JT94	Pseudomonas_phage	2.4e-57	97.2
WP_023083766.1\|5358803_5359982_+\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	8.7e-211	96.3
WP_014603615.1\|5360048_5360492_+	SocA family protein	I6R0L8	Salmonella_phage	4.3e-46	56.8
WP_023096037.1\|5362449_5365476_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	4.6e-22	24.3
5360978:5361005	attR	NA	NA	NA	NA

DBSCAN-SWA_14

6505318 : 6591315

Pseudomonas_virus(70.21%)

tRNA,lysis,protease,plate,portal,capsid,terminase,holin,tail,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019485018.1\|6505318_6506773_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_003096016.1\|6507109_6508519_+	glutamate--ammonia ligase	NA	NA	NA	NA
WP_003096019.1\|6508666_6509071_+	hypothetical protein	NA	NA	NA	NA
WP_003111156.1\|6509067_6511275_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_003104660.1\|6511562_6512084_+	DUF4124 domain-containing protein	NA	NA	NA	NA
WP_003096027.1\|6512080_6512653_+	DUF4124 domain-containing protein	NA	NA	NA	NA
WP_003096033.1\|6512923_6514000_+	nitrogen regulation protein NR(II)	Q8QKV7	Ectocarpus_siliculosus_virus	2.4e-05	21.8
WP_023096257.1\|6514002_6515433_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA
WP_015503796.1\|6516244_6516712_-	hypothetical protein	NA	NA	NA	NA
WP_003096047.1\|6516710_6517172_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_003096050.1\|6517230_6517722_-	protein-export chaperone SecB	NA	NA	NA	NA
WP_003096057.1\|6517758_6518013_-	glutaredoxin 3	V9QKN6	Rhizobium_phage	1.6e-13	43.4
WP_003096058.1\|6518014_6518434_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_023096259.1\|6518759_6520307_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_004365496.1\|6520620_6521439_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_031636835.1\|6521588_6522875_+	murein hydrolase activator EnvC	G9BW84	Planktothrix_phage	2.9e-10	39.8
WP_003096067.1\|6522903_6524214_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	3.9e-26	29.0
WP_021263278.1\|6524213_6524987_+	divergent polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_023092718.1\|6525055_6526537_+	hypothetical protein	NA	NA	NA	NA
WP_003096075.1\|6526575_6527331_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003106330.1\|6527480_6528233_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003111636.1\|6528323_6529070_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003106334.1\|6529241_6530012_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_003106336.1\|6530022_6530760_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_003111635.1\|6530808_6531069_-	DUF2164 domain-containing protein	NA	NA	NA	NA
WP_003096087.1\|6531072_6531711_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_003096088.1\|6531710_6532304_-	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_003135903.1\|6532464_6532863_+	acetyl-CoA sensor PanZ family protein	NA	NA	NA	NA
WP_011666785.1\|6532899_6533136_+	hypothetical protein	NA	NA	NA	NA
WP_023096261.1\|6533132_6534239_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_023096262.1\|6534332_6536585_+	AsmA family protein	NA	NA	NA	NA
WP_003096098.1\|6536581_6537649_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_003096100.1\|6537692_6537965_+	oxidative damage protection protein	NA	NA	NA	NA
WP_003123651.1\|6537992_6539075_+	oxidoreductase	NA	NA	NA	NA
WP_023096263.1\|6539320_6540058_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_023096264.1\|6540215_6540905_+	DUF502 domain-containing protein	NA	NA	NA	NA
WP_003096153.1\|6541153_6541927_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.3e-20	31.1
WP_003096156.1\|6541941_6542694_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003105543.1\|6542755_6543451_+	ABC transporter permease	NA	NA	NA	NA
WP_003096163.1\|6543447_6544140_+	ABC transporter permease	NA	NA	NA	NA
WP_021263146.1\|6544208_6545429_+	methyltransferase	NA	NA	NA	NA
WP_003110596.1\|6545827_6546298_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003135917.1\|6546301_6547780_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_003110594.1\|6547794_6548979_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_003096173.1\|6548989_6550519_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_023096265.1\|6551618_6552377_+	TIGR04255 family protein	NA	NA	NA	NA
WP_124083294.1\|6552369_6552699_+	hypothetical protein	NA	NA	NA	NA
WP_023096266.1\|6552709_6553309_+	hypothetical protein	NA	NA	NA	NA
WP_023096267.1\|6553281_6554349_-\|portal	phage portal protein	Q9ZXM6	Pseudomonas_virus	1.6e-195	97.7
WP_031299630.1\|6554348_6556109_-\|terminase	terminase ATPase subunit family protein	Q9ZXM5	Pseudomonas_virus	0.0e+00	100.0
WP_015967183.1\|6556264_6557086_+\|capsid	GPO family capsid scaffolding protein	Q9ZXM4	Pseudomonas_virus	8.9e-130	100.0
WP_023091259.1\|6557121_6558138_+\|capsid	phage major capsid protein, P2 family	Q9ZXM3	Pseudomonas_virus	1.7e-191	99.4
WP_023096268.1\|6558143_6558845_+\|terminase	terminase endonuclease subunit	Q9ZXM2	Pseudomonas_virus	1.1e-123	98.3
WP_023096269.1\|6558948_6559410_+\|head	head completion/stabilization protein	Q9ZXM1	Pseudomonas_virus	1.1e-79	98.0
WP_003098378.1\|6559409_6559622_+\|tail	tail protein X	Q9ZXL9	Pseudomonas_virus	4.9e-32	94.1
WP_003098379.1\|6559646_6560000_+	hypothetical protein	Q9ZXL8	Pseudomonas_virus	6.0e-59	100.0
WP_003098380.1\|6560001_6560274_+\|holin	phage holin family protein	Q9ZXL7	Pseudomonas_virus	2.6e-38	97.8
WP_023096270.1\|6560270_6561077_+	DUF3380 domain-containing protein	Q9ZXL6	Pseudomonas_virus	1.7e-149	97.8
WP_023096271.1\|6561073_6561535_+\|lysis	LysB family phage lysis regulatory protein	Q9ZXL5	Pseudomonas_virus	2.1e-72	99.3
WP_023096272.1\|6561612_6562149_+\|tail	phage tail protein	Q9ZXL3	Pseudomonas_virus	1.6e-95	99.4
WP_015967194.1\|6562141_6562612_+	phage virion morphogenesis protein	Q9ZXL2	Pseudomonas_virus	5.3e-79	100.0
WP_023096273.1\|6562645_6563374_+	hypothetical protein	Q9ZXL1	Pseudomonas_virus	4.9e-132	97.9
WP_023096274.1\|6563453_6564026_+\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	9.3e-94	99.5
WP_023096275.1\|6564022_6564367_+	hypothetical protein	Q9ZXK9	Pseudomonas_virus	1.4e-55	96.5
WP_023096276.1\|6564363_6565281_+\|plate	baseplate assembly protein	Q9ZXK8	Pseudomonas_virus	1.3e-145	88.5
WP_023096277.1\|6565277_6565895_+\|tail	phage tail protein I	A0A2H4JAU2	uncultured_Caudovirales_phage	4.5e-86	75.3
WP_023096279.1\|6567718_6568153_+	hypothetical protein	Q9ZXK5	Pseudomonas_virus	2.2e-31	61.3
WP_023096280.1\|6568253_6569429_+\|tail	phage tail sheath protein	Q9ZXK4	Pseudomonas_virus	6.6e-219	98.5
WP_016852040.1\|6569485_6570001_+\|tail	phage major tail tube protein	Q9ZXK3	Pseudomonas_virus	7.4e-90	94.7
WP_023096281.1\|6570055_6570385_+\|tail	phage tail assembly protein	Q9ZXK2	Pseudomonas_virus	4.9e-47	94.5
WP_003098394.1\|6570393_6570513_+\|tail	GpE family phage tail protein	Q9ZXK1	Pseudomonas_virus	1.8e-15	100.0
WP_023096282.1\|6570502_6573262_+\|tail	phage tail tape measure protein	Q9ZXK0	Pseudomonas_virus	0.0e+00	94.8
WP_015967206.1\|6573267_6573708_+\|tail	phage tail protein	Q9ZXJ9	Pseudomonas_virus	6.1e-77	100.0
WP_023096283.1\|6573704_6574982_+	phage late control D family protein	Q9ZXJ8	Pseudomonas_virus	5.1e-233	98.1
WP_078451175.1\|6575203_6575743_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_031633861.1\|6575865_6576399_+	hypothetical protein	NA	NA	NA	NA
WP_023096284.1\|6576452_6576803_-	hypothetical protein	Q9ZXJ5	Pseudomonas_virus	2.9e-53	89.6
WP_031633864.1\|6577121_6577463_-	helix-turn-helix transcriptional regulator	A0A2H4JFL3	uncultured_Caudovirales_phage	6.5e-18	45.0
WP_023876135.1\|6577548_6577761_+	DNA-binding protein	A0A2H4JE67	uncultured_Caudovirales_phage	1.1e-07	48.4
WP_031633866.1\|6577823_6578261_+	hypothetical protein	Q9ZXJ2	Pseudomonas_virus	3.6e-69	97.2
WP_003098408.1\|6578257_6578551_+	ogr/Delta-like zinc finger family protein	Q9ZXJ1	Pseudomonas_virus	1.1e-50	99.0
WP_034065695.1\|6578547_6578898_+	hypothetical protein	NA	NA	NA	NA
WP_023096289.1\|6578974_6579208_+	hypothetical protein	Q9ZXI9	Pseudomonas_virus	5.0e-38	98.7
WP_023096290.1\|6579204_6581925_+	hypothetical protein	Q9ZXI8	Pseudomonas_virus	0.0e+00	98.7
WP_023089226.1\|6581969_6582323_+	hypothetical protein	Q9ZXI7	Pseudomonas_virus	2.4e-60	97.4
WP_003098417.1\|6582334_6582541_+	TraR/DksA family transcriptional regulator	Q9ZXI6	Pseudomonas_virus	7.3e-33	100.0
WP_023096292.1\|6582844_6584755_+	hypothetical protein	A0A0U1T6D1	Pseudomonas_phage	6.2e-259	88.5
WP_023096293.1\|6584751_6585984_+	phosphoadenosine phosphosulfate reductase family protein	R9TRT5	Rhizobium_phage	3.7e-172	70.8
WP_023096294.1\|6585994_6586183_+	hypothetical protein	Q38017	Pseudomonas_virus	3.5e-05	70.6
WP_023096295.1\|6586179_6586392_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_023096296.1\|6586388_6587537_+	hypothetical protein	V9IQN0	Stenotrophomonas_phage	1.1e-72	41.3
WP_003096179.1\|6587928_6588987_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.0e-85	47.9
WP_003121266.1\|6588983_6589892_+	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
WP_009314460.1\|6589888_6590770_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.1e-100	60.6
WP_009314461.1\|6590769_6591315_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.5e-51	54.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022000

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection