CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022001	Pseudomonas aeruginosa strain Pa1207 chromosome, complete genome	5 crisprs	csa3,cas3,DEDDh,PD-DExK,WYL,RT,DinG	0	2	11	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022001_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022001_1

354965-355078

Orphan

Consensus_repeat	Method
GGCCAAAGAACTGGAGGGCAAGGTATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022001_1

>merge|NZ_CP022001|1|354965-355078|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGAGCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGTGGCCAAAGAACTGGAGGGCAAGGTATGA

>NZ_CP022001|1|1|354965-355078|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGA	GCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGT
GGCCAAAGAACTGGAGGGCAAGGTATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022001.1\|WP_016852350.1\|342856_343522_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP022001.1\|WP_003112945.1\|364246_364741_+\|DUF523-domain-containing-protein	unknown	unknown	gnl\|CDD\|224597
NZ_CP022001.1\|WP_003084320.1\|361905_362658_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_003118764.1\|362706_363405_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226274
NZ_CP022001.1\|WP_003112946.1\|365507_366278_-\|cystine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270430
NZ_CP022001.1\|WP_003107781.1\|343582_344644_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP022001.1\|WP_003084301.1\|351778_352876_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP022001.1\|WP_016852349.1\|340623_341730_-\|agmatine-deiminase	unknown	unknown	gnl\|CDD\|184135
NZ_CP022001.1\|WP_003111119.1\|341815_342694_-\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NZ_CP022001.1\|WP_016852354.1\|356121_358509_-\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|225241
NZ_CP022001.1\|WP_003112937.1\|344899_346276_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP022001.1\|WP_003084345.1\|366570_367008_+\|DUF4399-domain-containing-protein	unknown	unknown	gnl\|CDD\|373020
NZ_CP022001.1\|WP_016852356.1\|363426_363981_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_003112942.1\|359650_360154_-\|transcriptional-regulator	unknown	unknown	unknown
NZ_CP022001.1\|WP_003084339.1\|364743_365436_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP022001.1\|WP_003084290.1\|347347_348706_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP022001.1\|WP_016852353.1\|346554_347307_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NZ_CP022001.1\|WP_003084297.1\|348770_350141_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NZ_CP022001.1\|WP_003084299.1\|350256_351360_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP022001.1\|WP_003112941.1\|358619_359672_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890

Protein	Function_ID	Function_description	E-value
NZ_CP022001.1\|WP_016852350.1\|342856_343522_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	8.56691e-09
NZ_CP022001.1\|WP_003112945.1\|364246_364741_+\|DUF523-domain-containing-protein	gnl\|CDD\|224597	COG1683, COG1683, Uncharacterized conserved protein [Function unknown].	2.14015e-67
NZ_CP022001.1\|WP_003118764.1\|362706_363405_+\|hypothetical-protein	gnl\|CDD\|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	2.81845e-78
NZ_CP022001.1\|WP_003112946.1\|365507_366278_-\|cystine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270430	cd13712, PBP2_FliY, Substrate binding domain of an Escherichia coli ABC transporter; the type 2 periplasmic binding protein fold. This group contains cystine binding domain FliY and its related proteins. Cystine is an oxidized dimeric form of cysteine that is required for optimal bacterial growth. In Bacillus subtilis, three ABC transporters, TcyJKLMN (YtmJKLMN), TcyABC (YckKJI), and YxeMNO are involved in uptake of cystine. Likewise, three uptake systems were identified in Salmonella enterica serovar Typhimurium, while in Escherichia coli, two transport systems seem to be involved in cystine uptake. Moreover, L-cystine limitation was shown to prevent virulence of Neisseria gonorrhoeae; thus, its L-cystine solute receptor (Ngo0372) may be suited as target for an antimicrobial vaccine. The cystine receptor belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.13159e-122
NZ_CP022001.1\|WP_003107781.1\|343582_344644_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	8.00795e-165
NZ_CP022001.1\|WP_003084301.1\|351778_352876_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP022001.1\|WP_016852349.1\|340623_341730_-\|agmatine-deiminase	gnl\|CDD\|184135	PRK13551, PRK13551, agmatine deiminase; Provisional.	0
NZ_CP022001.1\|WP_003111119.1\|341815_342694_-\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP022001.1\|WP_016852354.1\|356121_358509_-\|penicillin-acylase-family-protein	gnl\|CDD\|225241	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only].	0
NZ_CP022001.1\|WP_003112937.1\|344899_346276_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.09186e-161
NZ_CP022001.1\|WP_003084345.1\|366570_367008_+\|DUF4399-domain-containing-protein	gnl\|CDD\|373020	pfam14347, DUF4399, Domain of unknown function (DUF4399). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 135 and 1079 amino acids in length.	2.38627e-47
NZ_CP022001.1\|WP_003084339.1\|364743_365436_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.29364e-79
NZ_CP022001.1\|WP_003084290.1\|347347_348706_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.71424e-158
NZ_CP022001.1\|WP_016852353.1\|346554_347307_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	4.197e-109
NZ_CP022001.1\|WP_003084297.1\|348770_350141_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NZ_CP022001.1\|WP_003084299.1\|350256_351360_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP022001.1\|WP_003112941.1\|358619_359672_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.54039e-32

>NZ_CP022001.1|WP_003084301.1|351778_352876_+|polyamine-ABC-transporter-substrate-binding-protein
MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIKTGK
>NZ_CP022001.1|WP_003084299.1|350256_351360_+|polyamine-ABC-transporter-substrate-binding-protein
MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK
>NZ_CP022001.1|WP_003084297.1|348770_350141_+|aspartate-aminotransferase-family-protein
MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEGVYIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVELAKAIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGSTVAGVSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEVGEENVAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFGSQYYGNAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAVALENIRILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKTRERFTDKGVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQTAAAVLA
>NZ_CP022001.1|WP_003084290.1|347347_348706_+|glutamine-synthetase
MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAEKGMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVIHDTFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGRSGRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHGDALDLADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIFSNADGTMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPDSSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERRNLRLPLTIEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLLSV
>NZ_CP022001.1|WP_016852353.1|346554_347307_+|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVVNGAGGLPLIIPALGDSIDQAALLDSVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAAIDAGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHVQPGGVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGVQWHPEWQVLTNPNYLAIFQAFGKACSKRAGQR
>NZ_CP022001.1|WP_003112937.1|344899_346276_-|glutamine-synthetase
MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERNSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
>NZ_CP022001.1|WP_003107781.1|343582_344644_-|polyamine-ABC-transporter-substrate-binding-protein
MPRLSALLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRSHLDRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSERYIADLEGGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPAGAQHPREAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH
>NZ_CP022001.1|WP_016852350.1|342856_343522_-|TetR/AcrR-family-transcriptional-regulator
MQPTSSTRKPRASSQARIAAILDAARGLLADEGISGLTIYSVAERAEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVDHAGLRCWRDLSRIVEERMLAVYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIFSLAMELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLSGFISDLNR
>NZ_CP022001.1|WP_003111119.1|341815_342694_-|N-carbamoylputrescine-amidase
MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPESARSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADPFGEKVEELNRTEEGILVHTFDLDALERTRSAWGVFRDRRPNLYGPLKTLDGSLES
>NZ_CP022001.1|WP_016852349.1|340623_341730_-|agmatine-deiminase
MSNPTSTPRADGFRMPAEWEPHEQTWMVWPERPDNWRNGGKPAQAAFAAVAKAIARFEPVTVCASAGQYENARARLDDGNIRVVEISNDDAWVRDTGPTFVIDDKGDVRGVDWGFNAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVDGEGTLITTEECLLNHNRNPHLSQAEIERTLRDYLAVESIIWLPNGLYNDETDGHVDNFCCYVRPGEVLLAWTDDQDDPNYLRCQAALRVLEESRDAKGRKLVVHKMPIPGPLYATQEECDGVDIVEGSQPRDPSIRLAGSYVNFLIVNGGIVAPSFDDPKDAEARAILQRVFPEHEVVMVPGREILLGGGNIHCITQQQPAPRKA
>NZ_CP022001.1|WP_016852354.1|356121_358509_-|penicillin-acylase-family-protein
MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLALAHLQAPVDVRYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGPKLVDTDRLFRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPAPLEFDLLGIPRRPFTPEDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGALGAGDWKDLGALARLSQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAPAVWYEAQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLVAEKVNPDNPNQVWYQGEWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWAFLETENPVLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKRPEGVNPSFILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYYNLADRGQWLDTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGKRLVEQLAAWNGDYPVDSTAATLFNQLLFQIAEGALHDELGDAFFDSLIATRAIDSALPRLAGDADSPWWDDRRTERRETRADIVRTAWNASLAHLRGTLGNDPSGWLWGKAHTLTHEHALGQQALLKRLLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPTHSLGINPVGQSGVPFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR
>NZ_CP022001.1|WP_003112941.1|358619_359672_+|AraC-family-transcriptional-regulator
MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPLPPPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEEALRSFVRFQHILSGGFAARLEVEGETARLILDINYLGYASLRQQIECLMLLFLKLLALISDDEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSAALLRRPSRNANPDMHDVLTRHAEEQSRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALAAGGASFRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQYRARLAKREEGYSTSGT
>NZ_CP022001.1|WP_003112942.1|359650_360154_-|transcriptional-regulator
MSLRPTLALLALVSLPLMAAQNDPQPSSKELMKEHQAQIQNDLADVDYKRKRIVEANMNLTDQEGEKFWPIYNTYRTESDKLSKETLKLLLDYAQAYNSGNVSDDQASKLIERVDDLQEDRLELRDKYVKRIAKNVSPKRAMRFLQIEIQLDAIATLEIGRQVPLVE
>NZ_CP022001.1|WP_003084320.1|361905_362658_-|hypothetical-protein
MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAAQKRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRKVVAAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVAADSLSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDAELTQYVNFAESPAGRSYYQAALAALKAGLAVDQAVAP
>NZ_CP022001.1|WP_003118764.1|362706_363405_+|hypothetical-protein
MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQGWSHQSIFMPERLTTRLAEECRTRAVAGDLTPAAIGRGDGQVIREGIRGDLTQWLEPGESEACDEYLGVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVSAVLYLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVVFMSAGTEHEVLPASRDRLSLTGWFRRRNESLLQLS
>NZ_CP022001.1|WP_016852356.1|363426_363981_-|hypothetical-protein
MLPTRSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGHAGISLRLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLPIFGVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIGDNSIGRIELRDITDLRGTIKVWGH
>NZ_CP022001.1|WP_003112945.1|364246_364741_+|DUF523-domain-containing-protein
MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEVAGGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRMAVLKARSPSCGNLENYDGRFNGNRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGLDAGG
>NZ_CP022001.1|WP_003084339.1|364743_365436_-|amino-acid-ABC-transporter-permease
MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR
>NZ_CP022001.1|WP_003112946.1|365507_366278_-|cystine-ABC-transporter-substrate-binding-protein
MRFLPRLLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQGGKLTGFETELGELLAAELAVKPEFVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKVFDFSEPYTISSAQLIVRADETRQFKSLEDLKGLKLGVGQGTNYADLAKSVAGVNVRTYPGAPEYLQDLASKRIDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPYRKNNPKFGEALNAALEKIKADGRFAKLSEKWFGLDVSQPPK
>NZ_CP022001.1|WP_003084345.1|366570_367008_+|DUF4399-domain-containing-protein
MRVTLPCLGLAALMFGASASLMAADLPRTKAPEGAKVYFITPADGATVDKTFTVKFGLKGMGVAPAGVDMPDTGHHHLLVDLKEQPAMNLPLPMTDNIRHFGKGQTETEITLPPGKHTLQLLVGDKNHVPLEPTVESEKITVTVK

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Crispr_ID: NZ_CP022001_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022001_2

1325693-1325787

Orphan

Consensus_repeat	Method
ACGGTCTGTTCGCTGCCGTTGTCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022001_2

>merge|NZ_CP022001|2|1325693-1325787|CRISPRCasFinder
ACGGTCTGTTCGCTGCCGTTGTCGGCCAGGCGGGCTTCGGCCTTGGTCATGTCCTTGTGCAGGCGGTCGACGGTCTGCTCGCTGCCGTTGTCGGC

>NZ_CP022001|2|2|1325693-1325787|CRISPRCasFinder
ACGGTCTGTTCGCTGCCGTTGTCGGC	CAGGCGGGCTTCGGCCTTGGTCATGTCCTTGTGCAGGCGGTCG
ACGGTCTGCTCGCTGCCGTTGTCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022001.1\|WP_003095526.1\|1316020_1316524_-\|urease-accessory-protein-UreE	unknown	unknown	gnl\|CDD\|237322
NZ_CP022001.1\|WP_003161310.1\|1324151_1324766_+\|cytochrome-b/b6-domain-containing-protein	unknown	unknown	gnl\|CDD\|226602
NZ_CP022001.1\|WP_003116116.1\|1323474_1324098_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_016852186.1\|1324762_1325530_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239026
NZ_CP022001.1\|WP_003099516.1\|1321277_1322669_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|273593
NZ_CP022001.1\|WP_003095519.1\|1319970_1321287_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
NZ_CP022001.1\|WP_003095479.1\|1331628_1332045_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183165
NZ_CP022001.1\|WP_003121125.1\|1333692_1334556_+\|oxaloacetate-decarboxylase	unknown	unknown	gnl\|CDD\|225311
NZ_CP022001.1\|WP_003121124.1\|1334647_1335262_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_016852187.1\|1318638_1319751_+\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|225779
NZ_CP022001.1\|WP_003095483.1\|1330934_1331474_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_CP022001.1\|WP_016852188.1\|1317541_1318642_+\|ferredoxin-reductase	unknown	unknown	gnl\|CDD\|99812
NZ_CP022001.1\|WP_003095492.1\|1330050_1330458_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377850
NZ_CP022001.1\|WP_003095488.1\|1330501_1330846_-\|osmotically-inducible-lipoprotein-OsmE	unknown	unknown	gnl\|CDD\|183058
NZ_CP022001.1\|WP_003095503.1\|1326191_1326725_-\|bacterioferritin	unknown	unknown	gnl\|CDD\|225104
NZ_CP022001.1\|WP_003095496.1\|1329091_1329904_-\|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR	unknown	unknown	gnl\|CDD\|226231
NZ_CP022001.1\|WP_016852185.1\|1327020_1329090_+\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|225529
NZ_CP022001.1\|WP_003107570.1\|1316753_1317383_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236881
NZ_CP022001.1\|WP_003095515.1\|1322647_1323337_-\|heavy-metal-response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|130454
NZ_CP022001.1\|WP_003095476.1\|1332219_1333485_-\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212673

Protein	Function_ID	Function_description	E-value
NZ_CP022001.1\|WP_003095526.1\|1316020_1316524_-\|urease-accessory-protein-UreE	gnl\|CDD\|237322	PRK13261, ureE, urease accessory protein UreE; Provisional.	2.44267e-58
NZ_CP022001.1\|WP_003161310.1\|1324151_1324766_+\|cytochrome-b/b6-domain-containing-protein	gnl\|CDD\|226602	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion].	1.20616e-69
NZ_CP022001.1\|WP_016852186.1\|1324762_1325530_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239026	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains. This domain is found in a variety of oxidoreductases. Common features of all known members of this family, like sulfite oxidase and nitrite reductase, are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	4.55161e-96
NZ_CP022001.1\|WP_003099516.1\|1321277_1322669_-\|sensor-histidine-kinase	gnl\|CDD\|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	0
NZ_CP022001.1\|WP_003095519.1\|1319970_1321287_+\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.70918e-108
NZ_CP022001.1\|WP_003095479.1\|1331628_1332045_+\|hypothetical-protein	gnl\|CDD\|183165	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF.	1.76735e-18
NZ_CP022001.1\|WP_003121125.1\|1333692_1334556_+\|oxaloacetate-decarboxylase	gnl\|CDD\|225311	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism].	1.3777e-87
NZ_CP022001.1\|WP_016852187.1\|1318638_1319751_+\|fatty-acid-desaturase	gnl\|CDD\|225779	COG3239, DesA, Fatty acid desaturase [Lipid metabolism].	5.26797e-66
NZ_CP022001.1\|WP_003095483.1\|1330934_1331474_-\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	5.52525e-29
NZ_CP022001.1\|WP_016852188.1\|1317541_1318642_+\|ferredoxin-reductase	gnl\|CDD\|99812	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	8.19115e-87
NZ_CP022001.1\|WP_003095492.1\|1330050_1330458_+\|hypothetical-protein	gnl\|CDD\|377850	pfam07498, Rho_N, Rho termination factor, N-terminal domain. The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It it thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers. This domain is found to the N-terminus of the RNA binding domain (pfam07497).	0.000208897
NZ_CP022001.1\|WP_003095488.1\|1330501_1330846_-\|osmotically-inducible-lipoprotein-OsmE	gnl\|CDD\|183058	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE.	1.90142e-51
NZ_CP022001.1\|WP_003095503.1\|1326191_1326725_-\|bacterioferritin	gnl\|CDD\|225104	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism].	1.01703e-50
NZ_CP022001.1\|WP_003095496.1\|1329091_1329904_-\|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR	gnl\|CDD\|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	1.65802e-48
NZ_CP022001.1\|WP_016852185.1\|1327020_1329090_+\|AsmA-family-protein	gnl\|CDD\|225529	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane].	0
NZ_CP022001.1\|WP_003107570.1\|1316753_1317383_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|236881	PRK11202, PRK11202, HTH-type transcriptional repressor FabR.	4.59942e-41
NZ_CP022001.1\|WP_003095515.1\|1322647_1323337_-\|heavy-metal-response-regulator-transcription-factor	gnl\|CDD\|130454	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator. Members of this family contain a response regulator receiver domain (pfam00072) and an associated transcriptional regulatory region (pfam00486). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members encoded by genes adjacent to genes for encoding a member of the heavy metal sensor histidine kinase family (TIGRFAMs:TIGR01386), its partner in the two-component response regulator system. [Regulatory functions, DNA interactions].	2.43467e-112
NZ_CP022001.1\|WP_003095476.1\|1332219_1333485_-\|Hsp70-family-protein	gnl\|CDD\|212673	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins. This bacterial subfamily includes the uncharacterized Escherichia coli YegD. It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. YegD lacks the SBD. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but instead, function as NEFs for their Hsp70 partners, other family members function as both chaperones and NEFs.	0

>NZ_CP022001.1|WP_016852186.1|1324762_1325530_+|molybdopterin-dependent-oxidoreductase
MKGPEKKRAKIAIDPSSERQIVDLQRRLLLRGGLSLGALAMLSGCRLQDGDSVDKVLWAMSRWNDRVQAWLFSRTRLAPTFDPSQVASPFPFNAFYPAYNVPEIDLPEYRLQVSGRVRDKRPWSLEQLRRLPQASQVTQLICIEGWSAIGQWSGVPLRTFLELVGADTSAKYVGFKCADRYYSSLDMPSALHPQTLLALEMSGQALPEENGYPLRLRIPTKLGFKNAKHVVEIFVSNSNPGGYWEDQGYNWFSGV
>NZ_CP022001.1|WP_003161310.1|1324151_1324766_+|cytochrome-b/b6-domain-containing-protein
MNRALHAWPVRLCHWLNAYAMACLIGSGWGIYNASPLLDFRFPAWATLGGWLGGSIAWHLAAMWLLLGNGLCYLAHGLSSGHFRRDFLPLSAAGVWRDLRLALGLRLVHEPGRYNAVQRLLYWLVLALGALLVLSGLAIWKPVQLHGLTALFGGFQGARWVHFLAMAGVVGFVVVHLLLVLLVPRTLLPMIIGREWRRGRRSEG
>NZ_CP022001.1|WP_003116116.1|1323474_1324098_+|hypothetical-protein
MLRLKASPALFFGLLLASAASFAAQPPAGMLQPLRGTIQQAADDHLQLKARNGQQLTVRLTDKTAIRAVSLAKPEDIQPDSFIGTAAVPQPDGTLKALEVHVFAPSLRGSGEGHRPWENADGSASTMTNGTVGNLVVSQGRRMTVKYGDGEKTVVVPDDVPIVSLEPGERSLLKPGAKVVLFPQKGADGSLTALAISVGKDGVTPPM
>NZ_CP022001.1|WP_003095515.1|1322647_1323337_-|heavy-metal-response-regulator-transcription-factor
MRILVIEDDTKTGEYLKKGLGESGYAVDWSQHGADGLYLALENRYDLVVLDVMLPGLDGWQIMEVLRKKHDVPVLFLTARDQLQDRIRGLELGADDYLVKPFSFTELLLRIRTLLRRGVVREAEQVQLADLQLDVLRRKVSRQGQVIALTNKEFALLHLLMRREGEVLSRTLIASEVWDMNFDSDTNVVDVAIKRLRAKVDNPFPNKLIHTVRGIGYVCEERPCPPAAP
>NZ_CP022001.1|WP_003099516.1|1321277_1322669_-|sensor-histidine-kinase
MPARRSLTLYAALLFAAVAALVVSAVGFYLYRSVEEAMLRRSDVMVAGRVEHFRNLLRDNLTLAELKARPRLFENMLGNEQDILLLGQPGEAPIVAVNPRHERLPSLRVVAAGQALNPSVVHAALTHDGIPMRVLAAEVLVGGREPLQITAAHLLLGETRMLAQYRDRVIAAVLLAFLGTALLGWLVLRHGLRPLRTLAAKAAEIHPTSLDTRLDVAAAPAELQQVAQSFNAMLERLDDGYQRLQQFSADLAHEIRTPIGSLMGHGQVALRQPRSNEEYQALIASNQEELERIARMVESILFLARADDVRAAVERSRLDLGEELRRQAEYFEGLAEERGLSLDVQVSGQLRADPQLFRRALSNLLANAIRYASADSLIEVRGLRRSGEFLLSVENACDRLPAEPLSRLFDRFYRGDAARSDAQSSGLGLAIVQAIMRLHGGRAEASAPAPGRIRFDLAFPAQD
>NZ_CP022001.1|WP_003095519.1|1319970_1321287_+|MFS-transporter
MFSPLVTFPALYTATLLMLAGSGLFTTYIGLRLTQEGAGDLWVGGLMASYYFGLVCGGKFGHKLIASFGHIRSYVACAGIATVTVLLHALVDQLEVWLLLRFITGAVMMNQYMVIESWLNEQAESHQRGKVFAGYMVAVDLGLVLGQGLLALSPTLDYKPLLLVAICFASCLIPLAMTRRVHPAKLVAAPLEVRFFWQRVPQALGTIFIAGLMVGAFYGLAPVYANRNGLDASQSSFFVGMCIVAGFCAQWPLGWLSDRLDRSWLIRGNAVLLCLASIPMWGLVTLPYWLLLANGFVTGMLLFTLYPLAVALANDHVEQPRRVALSAMLLTTYGVGACIGPLVAGALMRHFGPGLFYMLVSGYAVLLVFWVQPKRVTGEHRVDEAPLQHVAMPDTVSPMAATLDPRVEEVPEELVVEAPANIGRSDGEPDAGEKPAQS
>NZ_CP022001.1|WP_016852187.1|1318638_1319751_+|fatty-acid-desaturase
MNRPASPAMRDDRELTPEQLAAFGAELDALRQRTLADLGADDARYIRRVRAAVRVCCWSGRALLMFGWLPPTWLLGSLLLGLGKILENMELGHNVMHGQYDWMNDPEFAGRAYEWDIAGPSDFWRHTHNHIHHTYTNVLGKDDDVGYGVVRLFPEQRWKPFYRWQPLWVTLQALLFQYAVAIQHLRLDKYAKGRLDKAELMPLLRRLRAKLGRQWTKDYLLFPLLGLFAGGFGAVFVGNLLANVLRNLWTFTVIFCGHFTEKAVVFPPSVLEGETRGHWYLRQLRGSSNLEGGPLFHILTGNLSHQIEHHLYPDLPARRYAALSREVREIARRYGQTYNSGRLGRQFLTVLRRIWVYRLPPREPLPAGRG
>NZ_CP022001.1|WP_016852188.1|1317541_1318642_+|ferredoxin-reductase
MALLPLALLTPLLAPLRRLAARGWLREADVDGLLRHAHPLASLNRHYARVEARYWVADDMLALALRTAPGWPPARPGQHIQLLAKRDGVRVGRSYSLTRVVGERLEIAVKRHPDGLLSPWLCEHLAVGQRVELQPAQGDLRWPMQAEAVCLLAAGSGLTPLLGLLREALENGYRGPVLWLHYVRHPGQRAWLGELEALAARHPNLELRWSLTRGARADGCLEGHFQPRHLDGWAADLARSQALACGPAAFVEAVGEQLGARFAGLQTESFSVPRWRSGEAPREVRLRFARSQREVSGDSAASLLEQAEAHGLRPAHGCRQGICASCTCVLLSGCVRDLRSGALCSEPGQPIRLCVSAAHGDLALDL
>NZ_CP022001.1|WP_003107570.1|1316753_1317383_-|TetR-family-transcriptional-regulator
MSSPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRRNEFELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADLVVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPG
>NZ_CP022001.1|WP_003095526.1|1316020_1316524_-|urease-accessory-protein-UreE
MLVIHQRLPARSPRWDEELHLTYEARSKSRLRCFAASGEEVGLFLERGQPPLADGDCLEARDGRLVRVVARSERLLHVTCASPLELTRAAYHLGNRHVALQVGDGWLRLLDDYVLKAMLEQLGATVEAIEAPFQPEHGAYGGGHHHSHHGEAEFNYAPRLHQFGVRR
>NZ_CP022001.1|WP_003095503.1|1326191_1326725_-|bacterioferritin
MTTVQLTDVQTLRDRARKNIQEGAVTEGYSADRQTVLRLLNEALATELVCFLRYKRHYFMATGLKASIAAAEFLEHANQEMQHADQLAERIMQLGGEPDFNPRGLEERSHAEYVEGKTLKDMVTENLIAERIAIDSYREIITYLGNDDPTTRRIFEEILAQEEEHADDMADILDDLA
>NZ_CP022001.1|WP_016852185.1|1327020_1329090_+|AsmA-family-protein
MTRGRKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREEGEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLALLPLLWQTIRIPQIKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRLEVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQDASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTPAYSTDGHLLARLKEEGGALFRYENFNGKVGASDLHGSLTFVARQPRPKLSGKLTSEQLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIVHSDQLPISDLYTHLVLNDGLLRLEPLRFGVAGGKLESDIRLDGGKQPMQSRVKMSARGFKLKQLFPGFAPMQTSFGELNGDASLSGSGNSVAKILGGADGELKMLINDGAISKGLTEIAGLNVGNYLVTKLFGDDEVKINCAAADFGLQKGLMTSRLFVFDTENALVNVDGTVNFANEKLDLDVTPHSKGLRIFSLRSPLYVRGTFAKPDAGVHAGPLVARGAGMIALGVTVGPAASLLALVAPSKSDDNQCTALLQRMRLPAKVPAGKR
>NZ_CP022001.1|WP_003095496.1|1329091_1329904_-|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR
MLTIGQLARIFEISTKTLRHYDAIGLFVPARTGSDNGYRYYQPEQIEQLSRILALRRLDVPLEAIDRLKRDGALDDPQRLRHFLQRHQHTLREEISARQRLLAELDRTLATLAHWRIRNMHARIVERPAFSVVGMEYFGSAPGDTIGQLWERFIPREHEIAGKHDPEVSYGICAQQPNGEFHYVAGFEVQEGWPVPEGMVRFQVPAQKYAVFTHKGTAPQIAESFQAIYSHLLAERGLEPKAGVDFEYYDQRFRGPLDPNSQVDLYIPIY
>NZ_CP022001.1|WP_003095492.1|1330050_1330458_+|hypothetical-protein
MPRGDKSKYSDKQQRKAEHIEESYKAKGVSESEAEARAWATVNKQSGGGERKGGSGRAKSETAKRADRKDSAHRAAQARSGRPANRGSASRGKRQGSTSVSEMTREELMQLARKRDIRGRSTMRKAELIEALSRA
>NZ_CP022001.1|WP_003095488.1|1330501_1330846_-|osmotically-inducible-lipoprotein-OsmE
MYKQSLAALFVMATLAGCASTKVQNPVNYITFRNEPLVKDVEKGMSQQEVLRIGGTPSGTQKRLMKPGSCNSYILNKDGQQQPFYVSFDGSGKVDGSGFLSCSELDRHERDARP
>NZ_CP022001.1|WP_003095483.1|1330934_1331474_-|MOSC-domain-containing-protein
MQQVIAVSLCATHAFSKQVRPAIRLLKGLGVEGDAHHGVTVKHRSRVRQDPTQPNLRQVHLIHEELHDELRASGFAIGPGTMGENITTRGVDLLGLPTGTRLRLGESALVELTGLRNPCSQLDNYQPGLTAAVLGRDEQGNLIRKAGVMAIVLEDGEVRPGDAIDIQLPPLPHRALEKV
>NZ_CP022001.1|WP_003095479.1|1331628_1332045_+|hypothetical-protein
MNILRIPMFVLAMAVSAHGFAATAQQEKMTACNAEATTKALKGDERKAFMSGCLKAGAPAGGKATAQQEKMKSCNADASAKSLKGDERKAFMSSCLKAGGSAKAATQQEKMKTCNADATAKALKGDERKAFMSTCLKK
>NZ_CP022001.1|WP_003095476.1|1332219_1333485_-|Hsp70-family-protein
MNPSTAARALGIDFGTSNSTVGWWRPEVEPLIELEDGKITLPSVVFFNVEERRPVYGRQALGEYLEGYEGRLMRSLKSLLGSKLLKSETTVLGSALPFKDLLGLFIGQLKARGEAAAGQAFDAVVLGRPVFFVDDDPEADREAQDTLVQVANKLGFKEVSFQYEPIAAAFDYERGIQREELVLIVDIGGGTSDFSLVRLAPERRNLAERQDDILATGGVHIGGTDFDKQLSLEGVMPLFGYGSRMKSDAFMPTSYHLNLATWHTINAVYAQKSQLALKNMRYDIVDSTGIDRLFRLIEERAGHWLAMQVEDSKIRLTETERLHLSLERIEAGLGVELTRGLFENAVDGLLERVRNSVAQLLASAGVDPDRVDTVFFTGGSSGIPALRRSVSAMLPNARHVEGNLFGSIGSGLAIEAKKRYG
>NZ_CP022001.1|WP_003121125.1|1333692_1334556_+|oxaloacetate-decarboxylase
MHRASHHELRAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFAAIKATYDCLREERGAVASDLTASELSKKYTFPEEYQAWARDYMEVKE
>NZ_CP022001.1|WP_003121124.1|1334647_1335262_-|hypothetical-protein
MMGPFRRLAHLIDQGRQLDAALAGDPFALPAPEDRYSVRQLHGLYPRRHPGLYAPLLGSLALLLGAAPLGLAALRLALPEAPLRPLGWLSALPLLAAWLWLIALLSRGASLGPRLARDASLLLVATGLLLRLASGETSGLVALGGGACAWLLFNSRAMQRYMELVYAQRLYRAQSANRPGSAQRRLANQAAYRERKRRERSGRS

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Crispr_ID: NZ_CP022001_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022001_3

2068073-2068235

Orphan

Consensus_repeat	Method
GCGGTTATTCGCCCTACACCAGGTTGGGCCAGCGGAGCGCCGGTCCGTAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022001_3

>merge|NZ_CP022001|3|2068073-2068235|CRISPRCasFinder
GCGGTTATTCGCCCTACACCAGGTTGGGCCAGCGGAGCGCCGGTCCGTAGGGTGGATAACGCCCCAGGCGTTATTCGCCGTGAGGCGTCTGAAATGGCGGATAACCGCGTGGCGGTTATTCGCCCTACACCACGTTGGGCCAGCGGAGCGCCGGTCCGTAGGG

>NZ_CP022001|3|3|2068073-2068235|CRISPRCasFinder
GCGGTTATTCGCCCTACACCAGGTTGGGCCAGCGGAGCGCCGGTCCGTAGGG	TGGATAACGCCCCAGGCGTTATTCGCCGTGAGGCGTCTGAAATGGCGGATAACCGCGTG
GCGGTTATTCGCCCTACACCACGTTGGGCCAGCGGAGCGCCGGTCCGTAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022001.1\|WP_003120856.1\|2069807_2070722_-\|universal-stress-protein-A	unknown	unknown	gnl\|CDD\|236871
NZ_CP022001.1\|WP_003112780.1\|2074299_2075307_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP022001.1\|WP_003120861.1\|2060885_2061470_+\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153243
NZ_CP022001.1\|WP_003112779.1\|2072971_2074303_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP022001.1\|WP_003120855.1\|2071706_2072090_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_003116189.1\|2063287_2064811_-\|fumarate-hydratase	unknown	unknown	gnl\|CDD\|224862
NZ_CP022001.1\|WP_073653404.1\|2061883_2063191_+\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|234815
NZ_CP022001.1\|WP_003093898.1\|2072607_2072967_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274060
NZ_CP022001.1\|WP_016852099.1\|2058790_2060077_+\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NZ_CP022001.1\|WP_088540443.1\|2076577_2078149_-\|DUF4129-domain-containing-protein	unknown	unknown	gnl\|CDD\|379261
NZ_CP022001.1\|WP_003101155.1\|2067199_2067973_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|235852
NZ_CP022001.1\|WP_003093930.1\|2068273_2069725_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NZ_CP022001.1\|WP_003101153.1\|2066208_2067135_+\|iron-sulfur-binding-ferredoxin-reductase	unknown	unknown	gnl\|CDD\|235575
NZ_CP022001.1\|WP_003120863.1\|2057611_2058691_+\|phosphatidylserine/phosphatidylglycerophosphate/-cardiolipin-synthase-family-protein	unknown	unknown	gnl\|CDD\|224419
NZ_CP022001.1\|WP_003101151.1\|2065088_2066216_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP022001.1\|WP_003455444.1\|2070806_2071613_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274513
NZ_CP022001.1\|WP_003141221.1\|2075303_2076581_-\|DUF4350-domain-containing-protein	unknown	unknown	gnl\|CDD\|379527
NZ_CP022001.1\|WP_016852098.1\|2072190_2072547_+\|DUF4124-domain-containing-protein	unknown	unknown	gnl\|CDD\|379230
NZ_CP022001.1\|WP_003101146.1\|2061490_2061799_+\|ribbon-helix-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226771
NZ_CP022001.1\|WP_003101143.1\|2060170_2060782_+\|DUF2846-domain-containing-protein	unknown	unknown	gnl\|CDD\|378537

Protein	Function_ID	Function_description	E-value
NZ_CP022001.1\|WP_003120856.1\|2069807_2070722_-\|universal-stress-protein-A	gnl\|CDD\|236871	PRK11175, PRK11175, universal stress protein UspE; Provisional.	6.18568e-41
NZ_CP022001.1\|WP_003112780.1\|2074299_2075307_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.85211e-99
NZ_CP022001.1\|WP_003120861.1\|2060885_2061470_+\|DJ-1/PfpI-family-protein	gnl\|CDD\|153243	cd03169, GATase1_PfpI_1, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	3.72461e-111
NZ_CP022001.1\|WP_003112779.1\|2072971_2074303_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.10209e-86
NZ_CP022001.1\|WP_003116189.1\|2063287_2064811_-\|fumarate-hydratase	gnl\|CDD\|224862	COG1951, TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion].	1.05118e-147
NZ_CP022001.1\|WP_073653404.1\|2061883_2063191_+\|divalent-metal-cation-transporter	gnl\|CDD\|234815	PRK00701, PRK00701, divalent metal cation transporter MntH.	0
NZ_CP022001.1\|WP_003093898.1\|2072607_2072967_+\|hypothetical-protein	gnl\|CDD\|274060	TIGR02266, gmx_TIGR02266, Myxococcus xanthus paralogous domain TIGR02266. This domain is related to Type IV pilus assembly protein PilZ (pfam07238). It is found in at least 12 copies in Myxococcus xanthus DK 1622.	0.00176063
NZ_CP022001.1\|WP_016852099.1\|2058790_2060077_+\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	3.3436e-33
NZ_CP022001.1\|WP_088540443.1\|2076577_2078149_-\|DUF4129-domain-containing-protein	gnl\|CDD\|379261	pfam13559, DUF4129, Domain of unknown function (DUF4129). This presumed domain is found at the C-terminus of proteins that contain a transglutaminase core domain. The function of this domain is unknown. The domain has a conserved TXXE motif.	0.00171096
NZ_CP022001.1\|WP_003101155.1\|2067199_2067973_+\|enoyl-CoA-hydratase	gnl\|CDD\|235852	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional.	2.79206e-90
NZ_CP022001.1\|WP_003093930.1\|2068273_2069725_-\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NZ_CP022001.1\|WP_003101153.1\|2066208_2067135_+\|iron-sulfur-binding-ferredoxin-reductase	gnl\|CDD\|235575	PRK05713, PRK05713, iron-sulfur-binding ferredoxin reductase.	0
NZ_CP022001.1\|WP_003120863.1\|2057611_2058691_+\|phosphatidylserine/phosphatidylglycerophosphate/-cardiolipin-synthase-family-protein	gnl\|CDD\|224419	COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism].	8.25583e-83
NZ_CP022001.1\|WP_003101151.1\|2065088_2066216_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.30352e-61
NZ_CP022001.1\|WP_003455444.1\|2070806_2071613_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|274513	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). [Protein fate, Protein and peptide secretion and trafficking].	1.96341e-05
NZ_CP022001.1\|WP_003141221.1\|2075303_2076581_-\|DUF4350-domain-containing-protein	gnl\|CDD\|379527	pfam14258, DUF4350, Domain of unknown function (DUF4350). This domain family is found in bacteria, archaea and eukaryotes, and is approximately 70 amino acids in length.	1.84535e-10
NZ_CP022001.1\|WP_016852098.1\|2072190_2072547_+\|DUF4124-domain-containing-protein	gnl\|CDD\|379230	pfam13511, DUF4124, Domain of unknown function (DUF4124). This presumed domain is found in a variety of bacterial proteins. It is found associated at the N-terminus associated with other domains such as the SLT domain and glutaredoxin domains in some proteins. The function of this domain is unknown, but it may have an Ig-like fold.	5.5104e-11
NZ_CP022001.1\|WP_003101146.1\|2061490_2061799_+\|ribbon-helix-helix-domain-containing-protein	gnl\|CDD\|226771	COG4321, COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis [General function prediction only].	6.44728e-40
NZ_CP022001.1\|WP_003101143.1\|2060170_2060782_+\|DUF2846-domain-containing-protein	gnl\|CDD\|378537	pfam11008, DUF2846, Protein of unknown function (DUF2846). Some members in this family of proteins with unknown function are annotated as lipoproteins however this cannot be confirmed.	1.20717e-26

>NZ_CP022001.1|WP_003101155.1|2067199_2067973_+|enoyl-CoA-hydratase
MSELIRVEREAGLLTLRLDRQDKKNALTRAMYSRMAEALLEAQADTAVRVVLITGGDACFTSGNDILDFLEQPPSLRDSPVGRFMSALLEFPKPVIAAVNGPAVGIGTTLLLHCDLVFVGRNARLKMPFVNLGLTPEFGSSLILPRMLGHARAAELLMLGQDFSGEQAAAWGLANAALEDGATVLEHARDAARRFLHLAPSAVVESKRLMKAPFIEELRRVIAEEGDIFSTRLRSPEAIEALSAFMHRRQPDFSRFA
>NZ_CP022001.1|WP_003101153.1|2066208_2067135_+|iron-sulfur-binding-ferredoxin-reductase
MPDIRVGERRLAVAAGSNLLDALLAGGIAVPHSCRAGSCHACLVHCLQGEVDDTLPEALDPARREAGWRLACQCRVLGDLVLQPFDPERDGLPARVVACHWLGDVLRLRLEPERPLRYRAGQHLLLWSDDGVARPYSLASLPHEDPWLEFHIDCSAPGAFCDRARRLAPGALLRLGELRGGALRYEPDWQERPLLLMAAGTGLAPLWGILREALRAEHQAPIQLLHLARDHYLASELAELAGRHPQVRVNLVSAAQLPSALADLRLVPRRSMALLCGQPASVERFARHLYLAGVPRSQTLADLFLPHA
>NZ_CP022001.1|WP_003101151.1|2065088_2066216_+|GGDEF-domain-containing-protein
MRTDKPPLKQRALQKLLLRRFGMAAGTYLLGLVLLWLALLSGFYRAAPTTAAASTTLVVACQLAFLWLFASGRNLRYADPSLTEPQVLVAIAWLTYFLYHVDSLRGTFMVFYVLALLFGVFQLPPRVFARCAALAFIAFSGIYLVEALQQRLELPGRAALQVLVMFIVMVWLSLFASYIQAMRQRMRQRRYALQAHQDTLRGMMRQLEDLVATDELTGLFNRRHFMRMASRALEDLLPNRQHGLALIDLDHFKRINDRHGHAAGDRVLQTFAAVARSCLRDGDVLARYGGEEFVLLLPHADAEQLESCCERLRLAFQQAEPVGVTVDTLSLSVGMTLLYADDDLDEALQRADQALYRAKRGGRNRCDATWEVTSA
>NZ_CP022001.1|WP_003116189.1|2063287_2064811_-|fumarate-hydratase
MAVIKQDDLIQSVADALQFISYYHPVDFIQAMHEAYLREESPAARDSMAQILINSRMCATGHRPICQDTGIVTVFVRVGMDVRWDGATMSVDDMINEGVRRAYNLPENVLRASILADPAGARKNTKDNTPAVIHYSIVPGDKVEVDVAAKGGGSENKSKMAMLNPSDSIVDWVLKTVPTMGAGWCPPGMLGIGIGGTAEKAAVMAKEVLMDPIDIHELKARGPQNRIEELRLELFEKVNQLGIGAQGLGGLTTVLDVKIMDYPTHAASLPVCMIPNCAATRHAHFVLDGSGPAELEAPSLDAYPEIVWEAGPSARRVDLDKITPEEVQSWKPGETLLLNGKMLTGRDAAHKRMVDMLNKGETLPVDLKGRFIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQILEQTGLLGMIGKSERGPIAIEAIKDNKAVYLMAVGGAAYLVAQAIKKSKVLAFAELGMEAIYEFEVKDMPVTVAVDTNGESVHITGPAVWQKKIAESLAIEVK
>NZ_CP022001.1|WP_073653404.1|2061883_2063191_+|divalent-metal-cation-transporter
MPTTATAPFCPSAVSHSVAVPADASPLRKLALFIGPGLLVSVGYMDPGNWATAIEAGSRFGYALLFVVVLASFSGMLLQSLCSRLGIATGRDLAQLSRERYRPGVARGQWLLAELSIVATDLAEVLGAALAFHLLLGVSITTGVVLTAFDTLIVLALQGANFRRLEAIVLGLIATIGACFFVELVLIGPYWPDVAAGLRPSWDTLSSQEPLYLAIGILGATVMPHNLYLHSSVVQTRVSGDDAASKRSAIRFSRLDTIGSLSLALLVNAAILILAAAAFHGSGHTEVVEIQDAYHLLDPLVGGALASFLFGFALLAAGQSSTFTGTIAGQVVMEGFLRAKIPCWQRRLITRGLALVPALIGVLWLGEAAVGKLLVLSQVVLSLQLPFALWPLIRFSSDRGLMGEFVNPRWVSALAWSLFGLISAANLTLLYFWFG
>NZ_CP022001.1|WP_003101146.1|2061490_2061799_+|ribbon-helix-helix-domain-containing-protein
MCELYVKADPILYESRSRSLRIRGVVTTLRLENQFWDILREIAEGEGLSTNQLITNLYEEVMDYRGEVLNFASFLRVSCTRYLAQRREKVAELSLVGQRAQA
>NZ_CP022001.1|WP_003120861.1|2060885_2061470_+|DJ-1/PfpI-family-protein
MMAAKKILMLVGDYAEDYETMVPFQALQMVGHQVHAVCPDKRAGQSVRTAIHDFEGDQTYSEKPGHNFTLNADFAQARAEDYDALLIPGGRAPEYLRLNEQVLALVRDFDAARKPIAAVCHGAQLLAAAGVLQGRACSAYPACAPEVRLAGGEYVDLPPDQAHVDGHLVTAPAWPAHPAWLARFLEALGTRISH
>NZ_CP022001.1|WP_003101143.1|2060170_2060782_+|DUF2846-domain-containing-protein
MLRSLSLALSIVASLVGCSTPGAFFGAVDGPAFVAHPSADASHATVYLYRPRSQWADEELEAPGIFLNNELIGSLPSNGYLAFEFETGSYKLEMRRPLAGSFWTLFADGPMDFTRIASFMLEARAGSVYYLRYDELNPPPKSEHPAGEGDGPLQLVAADLGAAEIGATHQVQEPMQFAASGYRKRVQRSFWEGVGRALDKIGI
>NZ_CP022001.1|WP_016852099.1|2058790_2060077_+|acyltransferase
MATPDSKERFIGLEWLRFLLGLYVVVYHTLHTYPKEQKFPGLDELTSLGFFATSTFFVLSGFLLAHVYARSGRLRESARSFWTKRLSNLYPLHLFSLLLSILVLLALSHLGIGPELDKATPRFVIYDTNEVLGRTHPELFLHWMSNTELFVNSILQILLLQAWNPYYLTFNAPLWSLSTLMFFYLAFPFVAPRLMRSRHKWKVLALVWLVYLIPPALVVASESYGIPWTGLLHRNPLLRLPEFLGGILAYGLFRGYRDRGMVPGRGLLAALVALVVAAFLVADYLFTQGAKHWYFLLHNGLLLPAQLLLVCLCALPADPKSAFVRHWSPRLGAASLSLFALHVPMFTLFSRSERLIAVPGRCLDDWRACTEAAAALPSSLLYYPLFLVLLVAFCVLFQERGVVPVRKWLVRRLMPAPAPALAKVPRPA
>NZ_CP022001.1|WP_003120863.1|2057611_2058691_+|phosphatidylserine/phosphatidylglycerophosphate/-cardiolipin-synthase-family-protein
MLLAIEAAQRSIELELYLVEDGHCAELFLVALLDARRRGVAVRCLFDGFGCLGLGSAWIQRLREAGGELRLYNPLRWKLTGGNLYRDHRKLLLVDGRLGYVGGAGITDEFWEPVSDVSAWREVMVEMDGPVVADWAALFERQWLACLEEKAWKPREGMTLTRLPPQPGAARGLGRVAYADARQHRDILQSLVRALNGSRRRIWLATPYFLPTWKVRRALRKAAQRGVEVRLLLAGRLTDHAPVRYAGQRYYPRLLRAGVRIHEYQPRFLHLKMVMVDDWVSVGSCNFDHWNLRFNLDANLEALDPDFTNEAAASLLADFADSREVTLAMWRARPLWMRLHQRLWGWLDRVVVNFLDRRR
>NZ_CP022001.1|WP_003093930.1|2068273_2069725_-|pyruvate-kinase
MSVRRTKIVATLGPASNSPEVLEQLILAGIDVARLNFSHGTPDEHRARARLVRELAAKHGRFVALLGDLQGPKIRIAKFANKRIELQVGDKFRFSTSHARDAGTQEVVGIDYPDLVKDCGVGDELLLDDGRVVMVVEEVAADELRCRVLIGGPLSDHKGINRRGGGLTAPALTDKDKADIKLAADMDLDYVAVSFPRDAKDMEYARRLLTEAGGKAWLVAKIERAEAVADDDALDGLIRASDAVMVARGDLGVEIGDAELVGIQKKIILHARRNNKVVITATQMMESMIHSPMPTRAEVSDVANAVLDYTDAVMLSAESAAGEYPVEAVKAMARVCQGAEKHPTSQKSSHRLGQTFDRCDESIALASMYTANHFPGIKAIICLTESGFTPLIMSRIRSSVPIYAYSPHRETQARVAMFRGVETIPFDPAALPAEKVSQAAVDELLKRGVVTKGDWVILTKGDSYTAQGGTNTMKVLHVGDLLV
>NZ_CP022001.1|WP_003120856.1|2069807_2070722_-|universal-stress-protein-A
MNLHNLLVVVDPSSDEQPALSRAQWIAERSGASVELLLCDFNPALDGGLFFDSHSLQRARDLYLDERVTWLEQLSMPLQQAGIRTQVEAQWGKPLDRMVLQRVGETRPDLVLKSTRKHNLLRRLLLGNSDWQLIRHCPQPLWLVHHDAWRGQRLCAALDPLHASDKPAALDHRLIAAARQLEASLGLRADYLHTHAAMPRSLLFDAEMLAGYERFVLQHEERHRQAFDDLLAAYPEIAAERRHLLAGYAEQAIPDFVRANDIDLLLMGAVARGHLDNALIGQTAERVLEEVECDLLVLKPTNDI
>NZ_CP022001.1|WP_003455444.1|2070806_2071613_-|tetratricopeptide-repeat-protein
MRFARRLVLLPLLSLLAACSPTTPLFVAQVTTGEVAEYKQMKSNRMTAAIEEEGDLLTYSAMAIRDNRSAEAEKLYLTGYDNSRYSAEVRGISLYQIGLIYMSRYNDQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQRAREPVQKSARELLATWKPQQNLDLYKTSLDPDMTLLSRRAVLKDRVDEAAELYLLAVNDPAIPAGIKEKALYQLGLMYLAPDNPHPNRDKAIEYLRRQLLDYPEGELSNKAGRHLDQALNVQPR
>NZ_CP022001.1|WP_003120855.1|2071706_2072090_+|hypothetical-protein
MPMRSLIVACLALSATGCNSWSLNSDLNGAYRAYDKGDCAQVMLDLSRAERRIRARPYLQPEISLLRGQCLERQSLFVDAAQTYHFIIARYPTSEYAYRAKARLETLRQLGRLSETPASASAVPTRL
>NZ_CP022001.1|WP_016852098.1|2072190_2072547_+|DUF4124-domain-containing-protein
MRALWFCVALMPVLAQADIYRWTDAQGKVHFSATPPAGAQRVEVRPQVVERTAAAERAGQRQAALAEECGRLRQQLSQLERGGRFYRQDAGGGPVYLSDAELDAIRRELASRESERCR
>NZ_CP022001.1|WP_003093898.1|2072607_2072967_+|hypothetical-protein
MGLQRHIQRHQLPSYLKVFNRITDKPMGYIGNVSEDGLLLISQLPMLVGARFELRLKVPGLGGRPQCIDFSADCRWTCEDVTPGHFDSGFHLLAPPAEFLELVEALRRYFSFPRQPQSV
>NZ_CP022001.1|WP_003112779.1|2072971_2074303_-|DUF58-domain-containing-protein
MKPSRALLALFAALLLLAIGLGSLSALGQRLPAQLHTFWWAALAALLLLGLLDALWARRQAVPKLSRQLSGNLPLGRWSEVRLHLQHTYRRPVRLTLFDHLPAGMDFEYLPQEVELRPGESTEVGYRVRPLNRGHFVFPRCELELPSPLRLWRQRRYLEARGETRVYPDFARLYGAELMAVDHWLNQIGVRGGQRRGLGLEFHQLREFRDGDTLRQIDWKATARKRTPIAREYQDERDQQILFLLDCGRRMRSQDGDLSHFDHALNASLLLAYVALRQGDAVGAMTFAGDDRRHLPPGKGSAQLGALLNTVYDLQTSQRPADFPEAVQAVLSRQRRRALVILVTNLRDEDDEELLGAVKRLGRQHRVLVASLREEVLDTLRHEPVARYEQALAYTGTIDYLNARNGLHEKLAAHGVPVLDARPSELGPELISRYLGWKRAGVL
>NZ_CP022001.1|WP_003112780.1|2074299_2075307_-|MoxR-family-ATPase
MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVIDDVLTALLAGGHVLVEGVPGLGKTLLVRALARCFDGGFARIQFTPDLMPSDVTGHAVYDLASEQFKLRKGPVFTHLLLADEINRAPAKTQAALLEVMQERQVTLEGRALPVPQPFMVLATQNPIEQEGTYPLPEAELDRFMLKLRIDYPAEAEEQTLVRQVTRSARSDMLDVANLRPLLKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGEFVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV
>NZ_CP022001.1|WP_003141221.1|2075303_2076581_-|DUF4350-domain-containing-protein
MMSRRARFLLLAVLLLLAGLLAIFLASRLQPYTETIDLGPSPEARRNPYLAAELFLRKQGVTVSRADGLEVLKELPPSGHTLLLLGSRSGMTPGQARRLLQWSEQGGHLVLIAERLWDEDEKKSGDLLLDSLDIRQYLTEDFDDSQDRASEETADADADADEGSVDDHATEAPPEEAAGEEEEPADSVPDYSALTRLYLENERSPAYIGFDPDYHLYDPQNHAYAWANSGDATHLLQMQHGKGLVTVLTDAWIWQNRNIEQYDNAWLLWYLTQDNQVTLLYRAERDSLATLLARHFPEALAAALLLLLAGLWRAGLRQGPLQPVASRSRRQLEEHLRAGADFLLRQRGHVALLHGLQRDILRRARRRHPGFEQLGVAEQWQILGRMTRLPPSAISQAMRPYPAQRLSAADFTRQVAHLQSLRNAL
>NZ_CP022001.1|WP_088540443.1|2076577_2078149_-|DUF4129-domain-containing-protein
MRLTDASVAIRPRSAWEALDLGILLAHRHARLLMGSWALLTLPLFAVLSLLLWQHPTLAILIFWWLKPAFERLPLYILSHALFGDTPTLRQALRAYPALLRKQLPASLLWRRFSPTRSFDLPVLQLEGLAGEPRSQRLIVLSQRNAGGATWLTVVGVHLEMALWAGFAMLLYLLIPAQNEIDWNWQSLLDPEAGEWLWLEHLSNLLYVLVLVVWEPIYVACGFTLYLNRRTELEAWDIELVFRRLRQRLVGSAYVLLLGLTASLAWLPAPSAYAEPAAATSAGEAELPPEQARLLRQKLNSEQAGKQIRAIVDGAPFKNSETVTGWRFGDKTEKKDSRKEDEERLKAFFEALANWMPFRHAAQVIEVLLWALLFSAVFLLVWRYREWLRLFVGNLGLPQRARREAPTVMFGLDLSPESLPDDIAGNAERLWNEKPREALGLLYRGLLSRLLHDYRLPLKGSHTEGEVLRLVEGLEQQRPLLHYSQLLTAQWQALAYGHRLPADDARQRLCDGWRSLFAAGAKP

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Crispr_ID: NZ_CP022001_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022001_4

5841583-5841685

Orphan

Consensus_repeat	Method
GGCGTTATCCGCCGATACCCCGCCGC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP022001_4

>merge|NZ_CP022001|4|5841583-5841685|CRISPRCasFinder
GGCGTTATCCGCCGATACCCCGCCGCAACGGCGGAGCGAAAGCTGGGAACCCTCCGCGTAGGGCGAATAACGCCGGAGGCGTTATCCGCCGATACCCGCCGCG

>NZ_CP022001|4|4|5841583-5841685|CRISPRCasFinder
GGCGTTATCCGCCGATACCCCGCCGC	AACGGCGGAGCGAAAGCTGGGAACCCTCCGCGTAGGGCGAATAACGCCGGA
GGCGTTATCCGCCGATACCCGCCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022001.1\|WP_003091533.1\|5835020_5835338_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_003091547.1\|5846135_5846447_-\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|225704
NZ_CP022001.1\|WP_003114813.1\|5836473_5837301_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|131480
NZ_CP022001.1\|WP_023082219.1\|5847815_5848001_+\|DUF2061-domain-containing-protein	unknown	unknown	gnl\|CDD\|225746
NZ_CP022001.1\|WP_016852631.1\|5848174_5849536_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_003114814.1\|5834232_5834874_-\|FMN-dependent-NADH-azoreductase-3	unknown	unknown	gnl\|CDD\|224103
NZ_CP022001.1\|WP_003091540.1\|5840022_5840289_+\|DUF2790-domain-containing-protein	unknown	unknown	gnl\|CDD\|371321
NZ_CP022001.1\|WP_003114810.1\|5841971_5842598_-\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|236391
NZ_CP022001.1\|WP_003116398.1\|5842594_5844394_-\|cyclic-nucleotide-binding/CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225457
NZ_CP022001.1\|WP_003116397.1\|5850483_5851341_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP022001.1\|WP_003091546.1\|5844483_5846139_-\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|236495
NZ_CP022001.1\|WP_003116401.1\|5833228_5834128_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|307170
NZ_CP022001.1\|WP_016852630.1\|5849539_5850343_+\|VacJ-family-lipoprotein	unknown	unknown	gnl\|CDD\|225409
NZ_CP022001.1\|WP_003114808.1\|5846664_5847522_-\|glycine-betaine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270357
NZ_CP022001.1\|WP_003109184.1\|5837908_5839741_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP022001.1\|WP_003091575.1\|5851404_5852574_-\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|224666
NZ_CP022001.1\|WP_003114811.1\|5840321_5841446_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225688
NZ_CP022001.1\|WP_003091534.1\|5835537_5836467_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP022001.1\|WP_003114812.1\|5837282_5837846_+\|peptidylprolyl-isomerase-A	unknown	unknown	gnl\|CDD\|182824
NZ_CP022001.1\|WP_003109191.1\|5832883_5833219_+\|tRNA-binding-protein	unknown	unknown	gnl\|CDD\|182232

Protein	Function_ID	Function_description	E-value
NZ_CP022001.1\|WP_003091547.1\|5846135_5846447_-\|DUF485-domain-containing-protein	gnl\|CDD\|225704	COG3162, COG3162, Predicted membrane protein [Function unknown].	2.28294e-48
NZ_CP022001.1\|WP_003114813.1\|5836473_5837301_+\|alpha/beta-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	9.99012e-42
NZ_CP022001.1\|WP_023082219.1\|5847815_5848001_+\|DUF2061-domain-containing-protein	gnl\|CDD\|225746	COG3205, COG3205, Predicted membrane protein [Function unknown].	1.7036e-27
NZ_CP022001.1\|WP_003116397.1\|5850483_5851341_+\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	1.4231e-96
NZ_CP022001.1\|WP_003114814.1\|5834232_5834874_-\|FMN-dependent-NADH-azoreductase-3	gnl\|CDD\|224103	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism].	1.18979e-103
NZ_CP022001.1\|WP_003091540.1\|5840022_5840289_+\|DUF2790-domain-containing-protein	gnl\|CDD\|371321	pfam10976, DUF2790, Protein of unknown function (DUF2790). This family of proteins with unknown function appear to be restricted to Pseudomonadaceae.	1.53651e-35
NZ_CP022001.1\|WP_003114810.1\|5841971_5842598_-\|3'-5'-exonuclease	gnl\|CDD\|236391	PRK09145, PRK09145, 3'-5' exonuclease.	2.00701e-94
NZ_CP022001.1\|WP_003116398.1\|5842594_5844394_-\|cyclic-nucleotide-binding/CBS-domain-containing-protein	gnl\|CDD\|225457	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms].	0
NZ_CP022001.1\|WP_003091546.1\|5844483_5846139_-\|cation-acetate-symporter	gnl\|CDD\|236495	PRK09395, actP, cation/acetate symporter ActP.	0
NZ_CP022001.1\|WP_003116401.1\|5833228_5834128_+\|DMT-family-transporter	gnl\|CDD\|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	1.27099e-12
NZ_CP022001.1\|WP_016852630.1\|5849539_5850343_+\|VacJ-family-lipoprotein	gnl\|CDD\|225409	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane].	1.05866e-100
NZ_CP022001.1\|WP_003114808.1\|5846664_5847522_-\|glycine-betaine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270357	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to betaine compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine and proline betaine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.52249e-117
NZ_CP022001.1\|WP_003109184.1\|5837908_5839741_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	3.066e-156
NZ_CP022001.1\|WP_003091575.1\|5851404_5852574_-\|patatin-like-phospholipase-family-protein	gnl\|CDD\|224666	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only].	4.73926e-43
NZ_CP022001.1\|WP_003114811.1\|5840321_5841446_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225688	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP022001.1\|WP_003091534.1\|5835537_5836467_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.24343e-39
NZ_CP022001.1\|WP_003114812.1\|5837282_5837846_+\|peptidylprolyl-isomerase-A	gnl\|CDD\|182824	PRK10903, PRK10903, peptidylprolyl isomerase A.	5.29669e-93
NZ_CP022001.1\|WP_003109191.1\|5832883_5833219_+\|tRNA-binding-protein	gnl\|CDD\|182232	PRK10089, PRK10089, chaperone CsaA.	1.70058e-64

>NZ_CP022001.1|WP_003114811.1|5840321_5841446_-|GNAT-family-N-acetyltransferase
MPIQTLATLADIDAAEWDALLPPAQPFLRHAFLSALEDSHSVTPATGWRPAHRVLRDPQGRLCAALPAYVKAHSYGEYVFDWSWADACQRAGIRYYPKLLVGVPFTPVAGARLLGEDEGLQGLLASLGEEAEASGLSSIHVNFTDARADTLLAARDGWLERLGCQYHWHNRGYRDFQDFLEALSSRKRKQLRKEREQVGGQGIEFEWREGGQLSELEWDFVYLCYANTYLVRDRDPYLSREFFGLLAERMPEAIRVVFAHQRGKPVAMAFSLVAGDTLYGRYWGCLAEFDRLHFETCFYQGLEFAIGAGLARFDAGAQGEHKLIRGFEPVLTRSWHYLAHPGLRDAVAQFLEQERAGVRAYAEEAHGLLPYRQA
>NZ_CP022001.1|WP_003091540.1|5840022_5840289_+|DUF2790-domain-containing-protein
MKLASVVSAVITSLAPMAFAQDVDKDPGRGLPVEEYHYGMQLDVKNVLHRTDNSTRTGVVPVTVVYEDHSGELHKIRFLEWGGSTSNG
>NZ_CP022001.1|WP_003109184.1|5837908_5839741_+|ABC-transporter-ATP-binding-protein
MLYRRFERLIDPFRSASERMPPSEVLRFYVYFLRQVWPVFLALLVVGLIVALIEVALFSYLGRIVDLAQSTPSAEFFRVHANELIWMAVVALVLRPLFNALHDMLVHQSINPSMTNLIRWQNHRYVLKQSLGFFQNDFAGRIAQRIMQTGNSLRDSAVQVVDALWHVLIYTVSALVLFAEADWRLMIPLVLWVFAYVGALAYFVPQVKRRSVEASDSRSKLMGRIVDGYTNITTLKLFAHTRQEEDYAREAIGDQTLKSQRAGRVVTSMDVTITVMNGVLITGTTGLALWLWSQELISVGAIALATGLVIRINNMSGWIMWVVGGIFENIGQVQDGMQTIALPRKVVDREDAQPLRVERGEVEFEHIAFHYGKGSGVIQGLDLKVRPGEKIGLVGPSGAGKSTLVNLLLRLYDLESGRILVDGQDIAGVTQESLRAQIGMVTQDTSLLHRSIRDNLLYGRPGASDAELMEAVRKARADEFIPLLSDAEGRRGFDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVESAIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLDKGHIAESGTHAELLAHGGLYARLWQHQTGGFVGVD
>NZ_CP022001.1|WP_003114812.1|5837282_5837846_+|peptidylprolyl-isomerase-A
MLKRLLIAACTLLFAGSLLAATPAAKPHVLIATSLGEIEVELDPAKAPISVKNFLEYVDSGYYDGTLFHRVIPGFMVQTGGFSAGMQEKKTRAPIKNEADNGLLNERGTLAMARTGVVDSATSQFFINLTDNDFLNHGARDFGYAVFGKVVRGMGVVDQIAKVPTTRRNGFADVPSDDVVILSAKRL
>NZ_CP022001.1|WP_003114813.1|5836473_5837301_+|alpha/beta-hydrolase
MPDFQHRDCTLVYDDHPGPTERAPVLLLHGLGSSARDWEYQLPALLGRYRLLVPDLRGHGRSGKPRGGYSMAGFAEDCAALLDRLGCGPVHLVGISMGGMIGFQLACDRPDLLRSLTIVNSTPEVIPRKPREHLEVAKRKLLSRLLSLRTIGRALGRLLFPKAEQAGLREKIEARWAENDKRAYLASLDAIIGWGVQERLAEIACPTLVISADRDYTPVSLKQAYCERIADARLVVVEDSRHATPMDQPEIFNTTLLGFLADIDKTKEQPCSNVS
>NZ_CP022001.1|WP_003091534.1|5835537_5836467_+|LysR-family-transcriptional-regulator
MKAPRVTLDQWRTLQAVVDHGGFAQAAEALHRSQSSISYTVARMQEQLGVPLLRIDGRKAVLTEAGEVLLRRSRQLVKQAGQLEELAHHMEQGWEPEVRLVVDAAYPTARIVRSLSAFMPQSRGCRVLLREEVLSGVEEALIQGAADLAISGLIIPGHLGADLSVVEFVAVAHPDHPLHRLQRELTHQDLETQMQVVIRDSGRLQPRDHGWLGAEQRWTVGSLATAATFVGNGLGFAWLPRHIIERELQSGQLKPLPLSQGGVRQSRFYLYTNKEKPLGPASQILMEMLKSFANVPLNAPFAAPEPAAE
>NZ_CP022001.1|WP_003091533.1|5835020_5835338_-|hypothetical-protein
MKRLCCFALSLLPLSAFAYPIEVDPQLNGTEVSYSTQDIGRDMGAILLTNLGGQAAECTAVFRNGPETPKVRKGVIQPGQNSNFTAQFGRDIIKLRIKLTCKIAK
>NZ_CP022001.1|WP_003114814.1|5834232_5834874_-|FMN-dependent-NADH-azoreductase-3
MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPCDGHSAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
>NZ_CP022001.1|WP_003116401.1|5833228_5834128_+|DMT-family-transporter
MNRRSALAALHGGALLFGLTGVFGKLASASPGVIVFGRALFAVLALGLFARLAGQAWRALGPAQWLRLALCGLLLAGHWVSFFIAVKTAGVAIATLGFASFPAFTVILEGLLFRERIHLAEGLLVVLVSLGLVLVTPNFDLASGATLGLLWAILSGLLFALLSLANRSNSGQVGPVQAALWQNLVVALCLLPFAVGELPALPALDWLWLALLGVFCTGLAHSLFVASLAVVKARTAALVFALEPVYGIAFAWLLFHETPGPRMFLGGALIILAIVLSARLGARGRKTAVGDERGDPERA
>NZ_CP022001.1|WP_003109191.1|5832883_5833219_+|tRNA-binding-protein
MDIIEWQDFERVELRVGTILSAAPNPKARKPAYVLEVDLGPLGLRTSSAQLTAHYQAEQLVGRQVLCVCNFAPKQIAGVRSEVLVTGVYDSEDKVVLAGFDKPLPNGARLA
>NZ_CP022001.1|WP_003114810.1|5841971_5842598_-|3'-5'-exonuclease
MNTMVKLPDSRWPGWRRRLYWWMHEAVEAEEVISLDLETTSLDPRRADILSIGAVLVRRGKLVMGERLELYVEPPPSLDAESIRIHKLRRADLEGQLQLEQALRQVLAFIGDRPLLGYYLSFDVAVLNRHLRQLLDRQLHNPSIEISSLYHRKVSRHFPDAHIDLRFDTLARALDVPVSGRHTALGDAQAVALMFMRLLKGPAPKVIH
>NZ_CP022001.1|WP_003116398.1|5842594_5844394_-|cyclic-nucleotide-binding/CBS-domain-containing-protein
MPDSFNFASPPFDQLRPHQRETLKQALSVGYYAPGETLLEAGSAVPGLFVLLKGVVEERGDDGRVFAQYAADDLFDVRGLFSGSSKHRYLAIEESIVYELPASCFHQLCGENPGFARFFQADLAAKRQLAQRDGQNLAEFILTRIAREHLLPALEVEASLSLGDAARLQLSHGADALLVRLERDGPELGIVTRTDLMSAHFRDGRSELEAIGPLAHGPLASVELGDFLFDAMILMTRQRIERVAVTEDGQVIGLLHLTQVLSLFSTHSHVLALRIARADDLGDLRRCAETLDTLIATLAGNGIRLRFIMQLVSALNEQLLERLFELLLPPTLRGRCCLLVMGSEGRGEQLLKTDQDNALVLADDLPQEQALAMMQRFSAALLEFGYPPCPGGVMASRPEWCKPLAAWQAELRGTLLEGKPEQLLRLSILADAWPVAGNLQLFEPLRRQLRGFADGGERWLADIAAAALQFDTPLTFLGQLKTQDARLDLKRGGIFPIVHGIRTLALREGLETRGTLARIEALKRHKVLEARLADDLSESFELFLQLRLTRQLAGQRDGRQQGLDVSGMSRHDRDMLRYGLHVVKKFKQSVARQFHLETR
>NZ_CP022001.1|WP_003091546.1|5844483_5846139_-|cation-acetate-symporter
MIARLLAALGLAAFAPALWADALTGDVQRQPLNVSAIVMFVAFVGATLCITYWASKRNRSAADYYAAGGRITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLKQKQIRTLSACGSLVVVAFYLIAQMVGAGKLIELLFGLNYHVAVVLVGILMVLYVLFGGMLATTWVQIIKAVLLLSGASFMAIMVLKHVNFDVSTLFSEAIKVHPKGEAIMSPGGLVKDPISAFSLGFALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFGAILLVSTNPDFKDATGALIGGNNMAAVHLADAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVFKGGKANEKDELRVSKMTTVALGVVAIVLGILFEKQNIAFMVGLAFSIAASCNFPVLLLSMYWKKLTTRGAMIGGWMGLITAVGLMVLGPTIWVQILGHEKAIYPYEYPALFSMIVAFVGIWFFSITDKSAAADEERARFFPQFIRSQTGLGASGAVAH
>NZ_CP022001.1|WP_003091547.1|5846135_5846447_-|DUF485-domain-containing-protein
MNDSIYQRIDTNPRFKELVAKRERFAWILSSIMLGLYVIFILLIAFQPQLLGARISPDSSVTWGIPMGVGLILAAFILTGLYVRRANGEFDSLNQEILKEAQQ
>NZ_CP022001.1|WP_003114808.1|5846664_5847522_-|glycine-betaine-ABC-transporter-substrate-binding-protein
MRMMRRLLCWSAGLAMSAAVGMAAAADKPVITIGYVDGWSDSVATTHVAAEVIREKLGYEVKLMPVAAGIMWQGVARGKLDAMLSAWLPGTHGAYYEKMKDKVVNLAINYPDARIGLIVPEYVSANSIADLQAQKDAFGGRVVGIDAGAGVMIKTDEAIKQYGLDYKLVASSGSGMIAELTRAENEKKPVVVTGWIPHWMFAKWKLKFLDDPKKVYGDTEHVDTVANPALEAKAKPVWEFLKKFGWKDGNEVGQVMLAIQEGAKPEDAAKQWVAANPGRVKDWVQ
>NZ_CP022001.1|WP_023082219.1|5847815_5848001_+|DUF2061-domain-containing-protein
MLKTLTFTVMHFIIAFSVAYALTGSIAVGGLVAAVEPLCNSVGFYFHEKIWKRFEKDGAPG
>NZ_CP022001.1|WP_016852631.1|5848174_5849536_+|hypothetical-protein
MPHFLRFAALLGGLALGCANLAQARDVDAASYGYPLTNPFEATIATTPPELRPELPHSEDIDQKDYSLKLRPEREFALPDNFWPVKKLRYRLARQDHAAPLIFIIAGTGAHYASSFPEYLKKLFYQAGYHVVQLSSPTSWDFMASASRFATPGFSSDDADDLYRVMQAVRAQQRDLPVTDYYLTGYSLGALNAAFVSHLDESRRSFNFKKVLLLNPPVNLYTSVSNLDKLVETQVKGITDSRTFYEVVLSKLTRYFRQKGYVDINDAMLYDFQQSKQRLSNEEMAMLIGTSFRFSAADIAFTSDLVNRRGLITPPNYPINEGTSLEPFFKRALQCDFECYMTEQLIPMWRARYDGGSLTQLVNQVSLYKLQDYLHDSPKIAVMHNADDVILGPGDLGFLRRTFGERLTVYPYGGHCGNLNYKVNAQDMLDFFATPAAGQTKVASAALTQQAGN
>NZ_CP022001.1|WP_016852630.1|5849539_5850343_+|VacJ-family-lipoprotein
MSRTAHWMFALLLSAAASAQADEAAAPAELPPRQLDGDGFSRPLDQLKFNPGLDQREFERATLDALNMYDPWESWNRRVYHFNYRFDEWVFLPVVRGYEYVTPHFVRSGVSNFFDNLGDVPNLLNNLAQLKGKAAMETTARLLFNTTFGVLGLWDPATRMGLHKRSEDFGQTLGLYGVGSGPYLVLPILGPSNLRDTGGLVVDYVGEYQVNYLNVPQASGDHPEITALRVVDKRYNTSFRYGQMNSPFEYEKLRYIYTEARKLQIAE
>NZ_CP022001.1|WP_003116397.1|5850483_5851341_+|pirin-family-protein
MTRYRDVLELHTGHPASDGAGVRLTRVIGGPSPERFDPFLMLDQFDTQNPDDYVAGFPSHPHRGFETVTYMLEGRMRHEDHLGNRGLLKPGGVQWMTAAHGIIHSEMPEQVEGAMRGFQLWVNLPAKNKLAPAGYRDIEPEDVPRLETAGGVKVTVIAGRFDDGQAQQIGAVERPDTEPHYYDLQLPAGGRIAPRLPDGHRVLLYVYEGSLTVEGERPVEIATNRLARLSEEGELSLRSEAGARVLVLAGKPLREPIVQYGPFVMNSREEIEQALRDYRDGVLAV
>NZ_CP022001.1|WP_003091575.1|5851404_5852574_-|patatin-like-phospholipase-family-protein
MSDPLAPRPPLTGLILSGGGARAAYQVGVLAAIADLLPDSAGNPFPVIVGTSAGAINAVGLACGALQFRQAIQRLTAVWQGFRTEHVYRSDWPGVTRQASRFLGHSLLGLGRRVPVALLDNRPLHELLARELDFSGIHAAVRQRQLRAVAVTAFGYESGQAVTFYQGRATIDPWVRHRRLGIPTRLELRHLLASAAIPLLFPPVRINREYFGDGAVRSQAPISPALHLGATRVLVIGVSGNPATGGDSAMTGLPPSDRPPSLAQIGAHLLNSTFIDSLEGDIEQLQRMNQIGQLVAPEVRRQAGGLEPVEVLLVSPSRPLDEIAARHYRELSRVLRLFLRGPGATRASGAGVLSYLLFERGYCSELIELGYHDAMGKRAELERFLRIER

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Crispr_ID: NZ_CP022001_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022001_5

6967923-6968030

Orphan

Consensus_repeat	Method
CGGGTGCAACCGTTGCACCCCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022001_5

>merge|NZ_CP022001|5|6967923-6968030|CRISPRCasFinder
CGGGTGCAACCGTTGCACCCCGTTGTGTCGTCAGTTGCACCCCGTTACGTCGTGGTTTGCACCCCGTTACGTCGTCATTTGCACCCGGTGCAACCGTTGCACCCCGTT

>NZ_CP022001|5|5|6967923-6968030|CRISPRCasFinder
CGGGTGCAACCGTTGCACCCCGTT	GTGTCGTCAGTTGCACCCCGTTACGTCGTGGTTTGCACCCCGTTACGTCGTCATTTGCAC
CCGGTGCAACCGTTGCACCCCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022001.1\|WP_049238134.1\|6966680_6967301_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|236153
NZ_CP022001.1\|WP_023086958.1\|6968312_6968543_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_088540609.1\|6972848_6973130_+\|DUF3800-domain-containing-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_034081336.1\|6962891_6963509_-\|glycoside-hydrolase-family-19-protein	unknown	unknown	gnl\|CDD\|225720
NZ_CP022001.1\|WP_023086962.1\|6965011_6965290_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_044069802.1\|6969635_6969998_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_019396627.1\|6970443_6970722_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_023086961.1\|6965286_6966684_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273206
NZ_CP022001.1\|WP_077446906.1\|6970123_6970447_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_077446905.1\|6972170_6972845_+\|S24-family-peptidase	unknown	unknown	gnl\|CDD\|119397
NZ_CP022001.1\|WP_023086957.1\|6968539_6968848_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_016852553.1\|6961445_6962189_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_019396628.1\|6970718_6971069_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_016852551.1\|6962652_6962895_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_016852552.1\|6962185_6962656_-\|lysis-protein-Rz	unknown	unknown	unknown
NZ_CP022001.1\|WP_010791994.1\|6971256_6971478_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_023086963.1\|6963505_6963838_-\|phage-holin,-lambda-family	unknown	unknown	gnl\|CDD\|368287
NZ_CP022001.1\|WP_019486501.1\|6960780_6961326_-\|DNA-packaging-protein	unknown	unknown	gnl\|CDD\|226673
NZ_CP022001.1\|WP_128662536.1\|6971449_6971776_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022001.1\|WP_004353175.1\|6964625_6965015_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368957

Protein	Function_ID	Function_description	E-value
NZ_CP022001.1\|WP_049238134.1\|6966680_6967301_-\|AAA-family-ATPase	gnl\|CDD\|236153	PRK08116, PRK08116, hypothetical protein; Validated.	1.81003e-33
NZ_CP022001.1\|WP_034081336.1\|6962891_6963509_-\|glycoside-hydrolase-family-19-protein	gnl\|CDD\|225720	COG3179, COG3179, Predicted chitinase [General function prediction only].	2.20055e-71
NZ_CP022001.1\|WP_077446905.1\|6972170_6972845_+\|S24-family-peptidase	gnl\|CDD\|119397	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the repressor of genes in the cellular SOS response to DNA damage; MucA and the related UmuD proteins, which are lesion-bypass DNA polymerases, induced in response to mitogenic DNA damage; RulA, a component of the rulAB locus that confers resistance to UV, and RuvA, which is a component of the RuvABC resolvasome that catalyzes the resolution of Holliday junctions that arise during genetic recombination and DNA repair. The LexA-like proteins contain two-domains: an N-terminal DNA binding domain and a C-terminal domain (CTD) that provides LexA dimerization as well as cleavage activity. They undergo autolysis, cleaving at an Ala-Gly or a Cys-Gly bond, separating the DNA-binding domain from the rest of the protein. In the presence of single-stranded DNA, the LexA, UmuD and MucA proteins interact with RecA, activating self cleavage, thus either derepressing transcription in the case of LexA or activating the lesion-bypass polymerase in the case of UmuD and MucA. The LexA proteins are serine proteases that carry out catalysis using a serine/lysine dyad instead of the prototypical serine/histidine/aspartic acid triad found in most serine proteases. LexA sequence homologs are found in almost all of the bacterial genomes sequenced to date, covering a large number of phyla, suggesting both, an ancient origin and a widespread distribution of lexA and the SOS response.	2.85254e-10
NZ_CP022001.1\|WP_023086961.1\|6965286_6966684_-\|AAA-family-ATPase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	2.9786e-116
NZ_CP022001.1\|WP_023086963.1\|6963505_6963838_-\|phage-holin,-lambda-family	gnl\|CDD\|368287	pfam05106, Phage_holin_3_1, Phage holin family (Lysis protein S). This family represents one of a large number of mutually dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda.	1.77146e-35
NZ_CP022001.1\|WP_019486501.1\|6960780_6961326_-\|DNA-packaging-protein	gnl\|CDD\|226673	COG4220, COG4220, Phage DNA packaging protein, Nu1 subunit of terminase [DNA replication, recombination, and repair].	5.55791e-17
NZ_CP022001.1\|WP_004353175.1\|6964625_6965015_-\|hypothetical-protein	gnl\|CDD\|368957	pfam06530, Phage_antitermQ, Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	3.55825e-08

>NZ_CP022001.1|WP_049238134.1|6966680_6967301_-|AAA-family-ATPase
MALAEKTQRKINELLVGSGIPARYRASTFETYRTDGKAEKAAVLEACREYAERFVENFQDGRCLLLLGNLGTGKTHLACSIVQYVVRNLQAQAVITSASEIIRVAKGAMNRAAKYTERDALEELAGFDLLVIDELGAQGGTEYELGLLHEVIDRRYREMRPTVVVSNMSAQEVAKYIGDRAVDRLRENGGKAVGFTWGSARREVLE
>NZ_CP022001.1|WP_023086961.1|6965286_6966684_-|AAA-family-ATPase
MSRELYSEEAEFGVLGAILQSALQQNQALVDEALSSVTAADFYFEDNAALFQAIKDCYEEGIPVDPVTVGVVRDVLPSGAKLIPYAGNIARNVPSVANWRTYVRHVRERSILRCLIDTAESVKASATDDRPLPEIIARAQQAMADLRDLDDEAPKYKRLDEVMLKAVDVIDDKFNGRAPQWPGTGLADLDKLVRGIRPRKLTVIAGLPGSGKTTLALQIAQYNACEAGEPWLVFSLEMPEEELGVRSIASLGGVDLKRLDDPQQLGDDDWPRITSAVAKAKGAPLFICDDPNVTASQIRSTARRVKREHGLAGIVVDYLGLIPPEAKGRTRSEEVGKTNKALLRLAKELCVPVIELAQLNRDSTKRPGKRPQSSDLRDSGEIEADASCILMVHRDMDSEAGQNGITEILMTKCRHAPPGMCLLQQQGMYGRFVNFAGLREMSQEEVEMGRTYFANKHGKKKGKAA
>NZ_CP022001.1|WP_023086962.1|6965011_6965290_-|hypothetical-protein
MSNVQPMAPRKVMTRLEREFLKVAGQELAQVKVGGAAALSALLQMVANWHGDRGTLGFHDYGRLWLQDGNAKGAAVETLLRDLFGLNGPGAA
>NZ_CP022001.1|WP_004353175.1|6964625_6965015_-|hypothetical-protein
MSRTRTYVDKLLGDTEYLLEQWGWWRMDGMGVPGYVSPAAAIMSQAMPMSSPKAYHVTDDMALAVDRVIARLIDRAPQAGDFVWLYYGAKWPALRIAREHQIGEAKVRETLKLAVGWVDSALERFRESA
>NZ_CP022001.1|WP_023086963.1|6963505_6963838_-|phage-holin,-lambda-family
MKMPDKPDTWAALLAWLSAHYPQLYAAGLSFVVALTRVIYGGGTRRQALLEATLCTLITLGLIPVLEWFGLPQNMATAAGVFTGFLGVKKIAEFADRIADWKFPRRGAGE
>NZ_CP022001.1|WP_034081336.1|6962891_6963509_-|glycoside-hydrolase-family-19-protein
MKITADQLDRATGCGASTAGLWVEHINGSMARFEINTPERVAMFLAQVGHESQSLKRLVENLNYSAEGLLKTWPTRFTAVEAKQYARQPERIANRVYANRMGNGSPDSGDGYRYRGRGLIMITGHDNYAEAARALALPLVAQPELLEQRTWAAIASAWWWKSRGLNELADQGRFERITLKINSGYNGADDRAARLEWARAALKGE
>NZ_CP022001.1|WP_016852551.1|6962652_6962895_-|hypothetical-protein
MMLGFTTKDEARQLGVSHHGSYYGIPMWLGDVDSDCPLAFAKWAPLEMVVSLLSVIEGIVNSMLNQEPTFMFKVGRRIDQ
>NZ_CP022001.1|WP_016852552.1|6962185_6962656_-|lysis-protein-Rz
MTWRPWLVVTLVAALVLWRLDHVTAQRDDLQAAVEQSAETITAMAQQAQRDIQAQVQTDALARTYQAALQASHEENQLRRDAIGTGARVVYVKARCPADGVHQAPGASGSADAGRAVLAAADGQVVSDLRAGVERRELMIEALRKHIAGLPRYCRR
>NZ_CP022001.1|WP_016852553.1|6961445_6962189_-|hypothetical-protein
MISIKPEGFQQQLADLTELEQRQIPYATATALTRTAQGLMDRLRDEMRVVFDRPTPYTLNSLRMVPARKDRLEARVWFKDEADGAQPASVWIAPEVYGGPRRNKPAELQLRAKGILPEGKYVVPGAGADLDRYGNIRRGQVTRALSGIRGFSQAGYNANATDSRRSRAKGNARRYFVMTRKGQPIGIAERTGRGRDAVSVIMAFVSRPSYRRRLSFFEIAQQYADENLPREFEVAMRGVAARFAARR
>NZ_CP022001.1|WP_019486501.1|6960780_6961326_-|DNA-packaging-protein
MSKNETTKQRGWLNKSEMAASLGISPQAFDKWGVQPIERIGREAFYTVADVVENRIQHAARKQQPEGELPEGLDPYAEAKLTQERLRLTKAQAYAQEQKNQVQDKLLVPVPFATFALAKIAAKIGSALETVCKTVSRRHPDADPLVMESFEREIALARNLSAEFSDDIPGILDEYLATLDQ
>NZ_CP022001.1|WP_023086958.1|6968312_6968543_-|hypothetical-protein
MTTQPKPGRITASPNGRPVIAGPWPSYRQFRDLPERERWVLYGHAKACRGALEDQGFFMAEGYHDFVKRVTEELDI
>NZ_CP022001.1|WP_023086957.1|6968539_6968848_-|hypothetical-protein
MIKLPDEQQQLIQIAEAAVEYQLAETKRNALRRELNTLYTTYFAAYGRPYADHRRIDPYDERFEPVLEFTGPAYRRWKDQRDLTTRLKRKLRTLVQRLERAQ
>NZ_CP022001.1|WP_044069802.1|6969635_6969998_-|hypothetical-protein
MWDVPLTGSFLTGLEAGKSIAHIYLKYVRDVDDWMASEVFRSMVRDLLAKAPLDEREETVKRGQFTGFMSEIFNWLKASAQFAGSSLDRVEDQALVDRVNHYLDAGVADAIDAEIERAST
>NZ_CP022001.1|WP_077446906.1|6970123_6970447_-|hypothetical-protein
MNLATLLSNQCSPVPDEVLTDKQIRSIKLDRGTARHAAQNMALGVAAVGKLLALTSAEGEIGQETAERLGWFLEEIGGAIFMLVELEQVCTERINRQKERKQGEVPA
>NZ_CP022001.1|WP_019396627.1|6970443_6970722_-|hypothetical-protein
MSAVWNKPQSSALKAPISQLPPRRFAAINPTTTVEEALSEAIALTLSVSSILGALTTSDEEHACLYALEIAAEMAGDLVDAALDSLREEGQQ
>NZ_CP022001.1|WP_019396628.1|6970718_6971069_-|hypothetical-protein
MQQKTQSAQVPCAVTTDHQVCFDPLNGDEFLFSIVADRPVDAALAAAEDISEAVHLILLRMTRAMDDAGEPLLSQELNTLALLGAMSGALLRACRAGVATQSGNPESVSRHAGGAA
>NZ_CP022001.1|WP_010791994.1|6971256_6971478_+|hypothetical-protein
MTDAAEERIPTIDLQSLLDTLNALPKDTRVGFSGLTFYRVKWRGQTMVNIEFSEHVHRNSKGEVVVEAPGPEN
>NZ_CP022001.1|WP_128662536.1|6971449_6971776_+|hypothetical-protein
MLKLLGQRTDLPNRFIKWHRAVGRIVPSAHPARNDDEAILAKLKNDRRPDGTAELGSLLQHDLSIPLQVIRQQQIHSKVNAQITLNIQPEEASHLRKESHGATSALDA
>NZ_CP022001.1|WP_077446905.1|6972170_6972845_+|S24-family-peptidase
MDIYEIRRANLRTLIDERFGGKIAALAEAIERAPSYVSRCVTEKPEHRKRIGEGLARDIELKLGLPLLSLNYPKHHSEMSNVAPMLQPHRGPRKYPLISWVAAGERAESPDIFAPGDADEWLESTEVAGQHGYWLEVKGQSMISNSTPSFAPGMAILVQPEGFELISGKFYVFKHISGETTFKQYIYDAGTAYIAPLNPTFRTVEMDEEWTAIGRVVDAKIRGL
>NZ_CP022001.1|WP_088540609.1|6972848_6973130_+|DUF3800-domain-containing-protein
MKYSDWIVFVDESGDHSLESIDEAYPIFALTFCVIRKEEYLQNLIVNLKRLKFDLFGHDKIVFHEAEIIRRKGNFSRMNKESREMLIESPQVF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NZ_CP022001_4	4.1\|5841609\|51\|NZ_CP022001\|CRISPRCasFinder	5841609-5841659	51	NZ_CP042268	Pseudomonas aeruginosa strain HOU1 plasmid pHOU1-1, complete sequence	63791-63841	1.0
NZ_CP022001_5	5.1\|6967947\|60\|NZ_CP022001\|CRISPRCasFinder	6967947-6968006	60	MK510989	Pseudomonas phage BR322, partial genome	31234-31293	1.0
NZ_CP022001_5	5.1\|6967947\|60\|NZ_CP022001\|CRISPRCasFinder	6967947-6968006	60	MK510966	Pseudomonas phage CF53, partial genome	31235-31294	1.0
NZ_CP022001_5	5.1\|6967947\|60\|NZ_CP022001\|CRISPRCasFinder	6967947-6968006	60	KY707339	Pseudomonas phage JBD68, complete genome	33757-33816	1.0
NZ_CP022001_5	5.1\|6967947\|60\|NZ_CP022001\|CRISPRCasFinder	6967947-6968006	60	MK510981	Pseudomonas phage BR143, partial genome	31255-31314	1.0
NZ_CP022001_5	5.1\|6967947\|60\|NZ_CP022001\|CRISPRCasFinder	6967947-6968006	60	MK510967	Pseudomonas phage CF54, partial genome	4952-5011	1.0
NZ_CP022001_5	5.1\|6967947\|60\|NZ_CP022001\|CRISPRCasFinder	6967947-6968006	60	MK510991	Pseudomonas phage BR141, partial genome	31216-31275	1.0
NZ_CP022001_5	5.1\|6967947\|60\|NZ_CP022001\|CRISPRCasFinder	6967947-6968006	60	MK510980	Pseudomonas phage BR123, partial genome	31234-31293	1.0
NZ_CP022001_5	5.1\|6967947\|60\|NZ_CP022001\|CRISPRCasFinder	6967947-6968006	60	MK510983	Pseudomonas phage BR178, partial genome	31235-31294	1.0

1. spacer 4.1|5841609|51|NZ_CP022001|CRISPRCasFinder matches to NZ_CP042268 (Pseudomonas aeruginosa strain HOU1 plasmid pHOU1-1, complete sequence) position: , mismatch: 0, identity: 1.0

aacggcggagcgaaagctgggaaccctccgcgtagggcgaataacgccgga	CRISPR spacer
aacggcggagcgaaagctgggaaccctccgcgtagggcgaataacgccgga	Protospacer
***************************************************

2. spacer 5.1|6967947|60|NZ_CP022001|CRISPRCasFinder matches to MK510989 (Pseudomonas phage BR322, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

3. spacer 5.1|6967947|60|NZ_CP022001|CRISPRCasFinder matches to MK510966 (Pseudomonas phage CF53, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

4. spacer 5.1|6967947|60|NZ_CP022001|CRISPRCasFinder matches to KY707339 (Pseudomonas phage JBD68, complete genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

5. spacer 5.1|6967947|60|NZ_CP022001|CRISPRCasFinder matches to MK510981 (Pseudomonas phage BR143, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

6. spacer 5.1|6967947|60|NZ_CP022001|CRISPRCasFinder matches to MK510967 (Pseudomonas phage CF54, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

7. spacer 5.1|6967947|60|NZ_CP022001|CRISPRCasFinder matches to MK510991 (Pseudomonas phage BR141, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

8. spacer 5.1|6967947|60|NZ_CP022001|CRISPRCasFinder matches to MK510980 (Pseudomonas phage BR123, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

9. spacer 5.1|6967947|60|NZ_CP022001|CRISPRCasFinder matches to MK510983 (Pseudomonas phage BR178, partial genome) position: , mismatch: 0, identity: 1.0

gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	CRISPR spacer
gtgtcgtcagttgcaccccgttacgtcgtggtttgcaccccgttacgtcgtcatttgcac	Protospacer
************************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

649021 : 701799

uncultured_Caudovirales_phage(28.0%)

tRNA,tail,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009875776.1\|649021_650047_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	8.3e-109	58.1
WP_016852408.1\|650125_650695_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_003099587.1\|650778_651132_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_003099585.1\|651122_651665_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_003099584.1\|651637_652870_-	multifunctional CCA addition/repair protein	A0A076G5T8	Escherichia_phage	2.6e-77	43.1
WP_016252919.1\|652913_653420_-	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_003099581.1\|653513_655067_-	SpoVR family protein	NA	NA	NA	NA
WP_003099579.1\|655063_656335_-	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	4.2e-09	37.2
WP_003085078.1\|656435_658358_-	PrkA family serine protein kinase	NA	NA	NA	NA
WP_003099577.1\|658636_658969_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA
WP_003121837.1\|659012_659864_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.1e-08	33.3
WP_003085085.1\|659863_660244_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_003161932.1\|660280_661087_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_003459378.1\|661202_662189_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_003109024.1\|662185_663478_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_016852409.1\|663458_666248_-	LPS-assembly protein LptD	NA	NA	NA	NA
WP_016852410.1\|667386_668061_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_016852411.1\|668062_668821_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_012613533.1\|668821_669883_-	DUF3530 family protein	NA	NA	NA	NA
WP_009875783.1\|670034_672428_+	PAS domain S-box protein	NA	NA	NA	NA
WP_003085103.1\|672473_673106_+	response regulator transcription factor	NA	NA	NA	NA
WP_003085106.1\|673234_674269_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_003085109.1\|674502_675612_+	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-28	34.4
WP_003099539.1\|675667_676714_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003109044.1\|676828_678076_+	ABC transporter permease	NA	NA	NA	NA
WP_003099535.1\|678181_679012_+	ABC transporter permease	NA	NA	NA	NA
WP_003085122.1\|679135_679810_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_003099532.1\|679809_680628_+	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_016852412.1\|680700_682179_+	anthranilate synthase component I	NA	NA	NA	NA
WP_003121843.1\|682496_682811_-	transcriptional regulator	NA	NA	NA	NA
WP_003113202.1\|682910_683681_-	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	1.4e-71	59.1
WP_003085132.1\|684138_684339_+	repressor PtrB	W6ATC1	Enterobacter_phage	3.7e-05	58.3
WP_003459419.1\|684386_684746_+	hypothetical protein	NA	NA	NA	NA
WP_003118908.1\|685107_685557_+	hypothetical protein	B5TK61	Pseudomonas_phage	5.0e-26	53.3
WP_003101620.1\|685578_686094_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	1.8e-32	43.4
WP_016852413.1\|686090_686648_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	1.3e-44	70.3
WP_003085143.1\|686800_687127_+	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.2e-30	60.2
WP_003161928.1\|687123_688011_+	bacteriophage protein	S4TNY7	Salmonella_phage	4.1e-88	59.8
WP_003118911.1\|688003_688537_+\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	3.9e-62	64.6
WP_003161927.1\|688538_690644_+\|tail	phage tail fiber protein	Q9ZXK6	Pseudomonas_virus	3.0e-222	52.7
WP_016852415.1\|690651_691092_+	hypothetical protein	NA	NA	NA	NA
WP_003121848.1\|691134_692295_+\|tail	phage tail sheath family protein	Q38068	Phage_PS17	1.2e-188	83.4
WP_016852416.1\|692307_692811_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	1.8e-64	72.8
WP_003085178.1\|692825_693170_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_019416282.1\|693339_695577_+\|tail	phage tail length tape measure protein	NA	NA	NA	NA
WP_003113194.1\|695586_696459_+	hypothetical protein	A0A2H4J875	uncultured_Caudovirales_phage	2.5e-74	51.4
WP_003101635.1\|696433_696640_+	hypothetical protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.3e-18	64.2
WP_003113193.1\|696697_697687_+	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	7.5e-107	55.8
WP_003113192.1\|697719_698349_+	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	1.6e-86	78.0
WP_003121852.1\|698345_698708_+	hypothetical protein	H2BDA0	Pseudomonas_phage	4.2e-15	47.9
WP_003118919.1\|698704_698962_+	hypothetical protein	A0A125RNP3	Pseudomonas_phage	8.3e-18	64.6
WP_003113175.1\|699309_699915_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.6e-75	66.3
WP_003085203.1\|699916_700966_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-111	57.8
WP_003085205.1\|700962_701799_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.1e-70	56.9

DBSCAN-SWA_2

1561185 : 1607071

uncultured_Mediterranean_phage(33.33%)

tRNA,integrase,coat

attL 1574302:1574318|attR 1583223:1583239

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016852151.1\|1561185_1562049_+\|integrase	integrase	NA	NA	NA	NA
WP_003161383.1\|1562216_1562984_-	HNH endonuclease	NA	NA	NA	NA
WP_016852149.1\|1563033_1564677_-	hypothetical protein	NA	NA	NA	NA
WP_003161385.1\|1564966_1569439_-	N-6 DNA methylase	A0A1B1IUC6	uncultured_Mediterranean_phage	5.7e-37	23.7
WP_003161386.1\|1569463_1572247_-	DEAD/DEAH box helicase	A0A1B1IUI1	uncultured_Mediterranean_phage	2.2e-39	26.7
WP_003161387.1\|1572253_1577527_-	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	8.7e-61	22.9
1574302:1574318	attL	NA	NA	NA	NA
WP_003161389.1\|1578897_1580109_-\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B0VMI6	Pseudomonas_phage	1.1e-56	34.4
WP_003099270.1\|1580314_1581415_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_003099278.1\|1581455_1582040_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_003099279.1\|1582081_1582696_-	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_003099281.1\|1582812_1583754_-	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	4.1e-46	35.4
1583223:1583239	attR	NA	NA	NA	NA
WP_003099284.1\|1583920_1584769_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_016852148.1\|1584770_1585388_-	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_016852147.1\|1585392_1587165_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_016852146.1\|1587308_1588577_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_003099290.1\|1588594_1589677_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	5.6e-07	48.3
WP_003099293.1\|1589678_1590509_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_003099296.1\|1590502_1591261_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA
WP_003099300.1\|1591250_1592048_+	glutamate racemase	NA	NA	NA	NA
WP_003099307.1\|1592181_1592703_+	acyloxyacyl hydrolase	A0A2H4J0I5	uncultured_Caudovirales_phage	1.4e-59	69.8
WP_003121048.1\|1592828_1594274_-	deoxyribodipyrimidine photo-lyase	A0A167RC11	Powai_lake_megavirus	1.8e-45	27.8
WP_003094990.1\|1594270_1595170_-	MerR family transcriptional regulator	Q9EYF2	Enterobacteria_phage	8.5e-17	39.1
WP_003099314.1\|1595179_1596136_-	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
WP_003099318.1\|1596288_1597272_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_016852145.1\|1597685_1598603_+	TIGR01777 family protein	NA	NA	NA	NA
WP_003099324.1\|1598599_1599622_+	ferrochelatase	NA	NA	NA	NA
WP_003099328.1\|1599901_1601275_+	MFS transporter	NA	NA	NA	NA
WP_003099330.1\|1601276_1602224_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_016852144.1\|1602220_1604593_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_003121045.1\|1604609_1605398_-	molecular chaperone	NA	NA	NA	NA
WP_016852143.1\|1605416_1605959_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_003135089.1\|1605958_1606492_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_003099340.1\|1606522_1607071_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_3

2202143 : 2208601

Pseudomonas_phage(100.0%)

integrase

attL 2198330:2198344|attR 2215753:2215767

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2198330:2198344	attL	NA	NA	NA	NA
WP_003125073.1\|2202143_2202578_+	hypothetical protein	Q56VP5	Pseudomonas_phage	3.0e-60	86.8
WP_003115130.1\|2202594_2202687_+	hypothetical protein	Q56VP4	Pseudomonas_phage	7.3e-09	100.0
WP_003124954.1\|2202698_2202950_+	hypothetical protein	NA	NA	NA	NA
WP_003163345.1\|2202963_2203182_+	hypothetical protein	NA	NA	NA	NA
WP_003159569.1\|2204452_2204803_+	DUF2523 domain-containing protein	Q56VP0	Pseudomonas_phage	5.5e-20	41.1
WP_023093179.1\|2204804_2206067_+	hypothetical protein	Q56VN9	Pseudomonas_phage	1.3e-116	55.2
WP_003115206.1\|2206325_2207618_+	hypothetical protein	Q56VN8	Pseudomonas_phage	2.8e-247	94.2
WP_016852062.1\|2207617_2208601_+\|integrase	tyrosine-type recombinase/integrase	Q56VN7	Pseudomonas_phage	6.8e-92	52.3
2215753:2215767	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3382221 : 3439825

Pseudomonas_phage(76.19%)

tRNA,integrase,holin

attL 3378926:3378943|attR 3422529:3422546

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3378926:3378943	attL	NA	NA	NA	NA
WP_003087885.1\|3382221_3383553_-	hypothetical protein	A0A0F6WCV7	Sinorhizobium_phage	5.3e-39	28.1
WP_003087888.1\|3383684_3384407_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_003087890.1\|3384411_3384909_-	peptidyl-prolyl cis-trans isomerase	A0A076FI46	Aureococcus_anophage	1.4e-13	32.9
WP_003098032.1\|3385031_3386702_+\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	4.8e-199	60.3
WP_016851753.1\|3386711_3388094_+\|tRNA	cysteine--tRNA ligase	A0A2K9L6B7	Tupanvirus	6.9e-42	31.6
WP_003087898.1\|3388151_3389006_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	3.0e-27	34.7
WP_033946952.1\|3389636_3390746_-\|integrase	site-specific integrase	H2BDD9	Pseudomonas_virus	4.8e-211	97.6
WP_003098018.1\|3390631_3390973_-	helix-turn-helix domain-containing protein	Q9MC86	Pseudomonas_phage	5.4e-49	100.0
WP_071536976.1\|3391120_3391534_-	DUF2591 domain-containing protein	A0A125RNP6	Pseudomonas_phage	1.1e-40	60.8
WP_058147647.1\|3391530_3391851_-	hypothetical protein	J7HXK7	Pseudomonas_phage	5.1e-33	66.1
WP_058147645.1\|3392729_3393215_-	hypothetical protein	A0A0A1IW26	Pseudomonas_phage	2.2e-88	98.8
WP_034069441.1\|3393479_3393788_-	hypothetical protein	Q9MC61	Pseudomonas_phage	2.0e-13	49.5
WP_034080564.1\|3395500_3395710_-	hypothetical protein	H2BDF2	Pseudomonas_virus	1.5e-25	82.9
WP_034019333.1\|3395673_3395886_-	hypothetical protein	H2BDF3	Pseudomonas_virus	8.1e-27	81.4
WP_034080566.1\|3396073_3396409_-	LytTR family transcriptional regulator	H2BDF6	Pseudomonas_virus	3.4e-51	91.0
WP_034080567.1\|3396405_3397032_-	exonuclease	A0A125RNR2	Pseudomonas_phage	3.0e-109	89.9
WP_034080569.1\|3397035_3397767_-	single-stranded DNA-binding protein	A0A125RNR3	Pseudomonas_phage	3.5e-69	58.2
WP_034080570.1\|3397775_3398840_-	hypothetical protein	Q9MC69	Pseudomonas_phage	2.8e-83	95.2
WP_034080572.1\|3398881_3399277_-	hypothetical protein	A0A0U4IIY3	Pseudomonas_phage	2.9e-70	96.9
WP_023099013.1\|3399578_3399968_-	hypothetical protein	A0A125RNR7	Pseudomonas_phage	4.9e-70	100.0
WP_052158622.1\|3399964_3400468_-	hypothetical protein	A0A0S2SY59	Pseudomonas_phage	1.4e-29	48.0
WP_023082546.1\|3400464_3400830_-	hypothetical protein	A0A125RNR9	Pseudomonas_phage	3.4e-65	95.9
WP_124073812.1\|3400832_3401093_-	hypothetical protein	NA	NA	NA	NA
WP_003158892.1\|3401308_3401686_-	hypothetical protein	W6MWX7	Pseudomonas_phage	7.3e-63	96.0
WP_023082543.1\|3401722_3401938_-	hypothetical protein	NA	NA	NA	NA
WP_023082542.1\|3402119_3402302_-	hypothetical protein	NA	NA	NA	NA
WP_023082540.1\|3402587_3402794_-	hypothetical protein	A0A0U4IJ22	Pseudomonas_phage	1.6e-32	94.1
WP_023082539.1\|3402804_3403011_-	hypothetical protein	A0A0U4B0I0	Pseudomonas_phage	1.2e-27	89.7
WP_023082538.1\|3403075_3403249_-	hypothetical protein	NA	NA	NA	NA
WP_023082537.1\|3403245_3403524_-	hypothetical protein	NA	NA	NA	NA
WP_021205581.1\|3403616_3403946_-	hypothetical protein	NA	NA	NA	NA
WP_033936263.1\|3404634_3405024_-	hypothetical protein	NA	NA	NA	NA
WP_033979600.1\|3405544_3406351_-	helix-turn-helix transcriptional regulator	A0A2H4J6Q0	uncultured_Caudovirales_phage	3.4e-49	47.0
WP_012614002.1\|3406466_3406664_+	helix-turn-helix domain-containing protein	A0A2H4JF66	uncultured_Caudovirales_phage	3.4e-11	59.0
WP_033979598.1\|3406699_3407272_+	hypothetical protein	A0A0S2SYA8	Pseudomonas_phage	2.1e-98	97.9
WP_014603752.1\|3407468_3407657_+	hypothetical protein	A0A0U4IIX2	Pseudomonas_phage	8.8e-25	88.7
WP_023082529.1\|3408566_3410396_+	AAA family ATPase	A0A0U4B0G9	Pseudomonas_phage	0.0e+00	94.4
WP_058200133.1\|3410511_3411021_+	hypothetical protein	H2BDI1	Pseudomonas_virus	2.9e-86	98.2
WP_088540448.1\|3411022_3411226_+	TraR/DksA family transcriptional regulator	Q9MC51	Pseudomonas_phage	4.0e-31	95.5
WP_012614009.1\|3411215_3411848_+	hypothetical protein	Q9MC50	Pseudomonas_phage	4.0e-122	99.0
WP_003124795.1\|3411840_3412428_+	DUF1367 family protein	Q9MC49	Pseudomonas_phage	1.2e-109	99.5
WP_047712979.1\|3412424_3412688_+	hypothetical protein	A0A0S2SYB2	Pseudomonas_phage	2.2e-42	98.8
WP_073668198.1\|3412783_3413050_+	hypothetical protein	H2BDI6	Pseudomonas_virus	3.5e-35	82.6
WP_088540449.1\|3413046_3413628_+	recombination protein NinG	A0A125RNK9	Pseudomonas_phage	1.2e-93	84.5
WP_023082520.1\|3413624_3413963_+	hypothetical protein	A0A125RNL0	Pseudomonas_phage	6.4e-58	99.1
WP_023082519.1\|3413959_3414493_+	hypothetical protein	A0A1B0YZZ3	Pseudomonas_phage	3.3e-16	29.7
WP_058332170.1\|3415246_3415531_+\|holin	phage holin family protein	A0A0U4J8T9	Pseudomonas_phage	1.1e-47	98.9
WP_031668856.1\|3415561_3416185_+	hypothetical protein	A0A125RNL5	Pseudomonas_phage	4.6e-86	73.9
WP_023082516.1\|3416216_3416696_+	DUF2280 domain-containing protein	A0A125RNL6	Pseudomonas_phage	5.3e-66	91.5
WP_023082515.1\|3416685_3418149_+	hypothetical protein	G0ZND4	Cronobacter_phage	3.1e-242	84.0
WP_023082514.1\|3418148_3418346_+	hypothetical protein	H2BD77	Pseudomonas_phage	8.9e-28	98.5
WP_023082513.1\|3418348_3419719_+	DUF1073 domain-containing protein	H2BD78	Pseudomonas_phage	3.9e-263	98.0
WP_034080580.1\|3421415_3422693_+	hypothetical protein	H2BD80	Pseudomonas_phage	5.3e-214	98.8
3422529:3422546	attR	NA	NA	NA	NA
WP_023082510.1\|3422696_3423146_+	hypothetical protein	A0A125RNM2	Pseudomonas_phage	2.8e-77	98.7
WP_023082509.1\|3423161_3424253_+	hypothetical protein	J7I0Q9	Pseudomonas_phage	3.0e-189	90.7
WP_023082508.1\|3424538_3424940_+	hypothetical protein	J7HX89	Pseudomonas_phage	1.3e-70	97.7
WP_023082507.1\|3424936_3425257_+	hypothetical protein	J7I4I8	Pseudomonas_phage	1.5e-56	97.2
WP_003127992.1\|3425658_3426033_+	hypothetical protein	J7I407	Pseudomonas_phage	5.7e-68	100.0
WP_023082505.1\|3426047_3427043_+	hypothetical protein	J7HX84	Pseudomonas_phage	2.1e-165	97.9
WP_034065418.1\|3427039_3427657_+	hypothetical protein	J7I4I5	Pseudomonas_phage	3.0e-114	100.0
WP_088540450.1\|3427656_3430146_+	tape measure protein	J7HXG0	Pseudomonas_phage	0.0e+00	91.8
WP_016852774.1\|3430142_3430610_+	hypothetical protein	H2BD92	Pseudomonas_phage	1.4e-92	99.4
WP_023098722.1\|3430593_3431085_+	DUF1833 domain-containing protein	J7I404	Pseudomonas_phage	1.6e-89	96.9
WP_033979161.1\|3431089_3431497_+	hypothetical protein	J7HX80	Pseudomonas_phage	1.5e-74	99.3
WP_088540451.1\|3431468_3434198_+	hypothetical protein	A0A0U4JIN5	Pseudomonas_phage	0.0e+00	99.3
WP_023111238.1\|3434170_3435016_-	hypothetical protein	A0A0P0YP88	Yellowstone_lake_phycodnavirus	3.3e-18	35.9
WP_088540452.1\|3435158_3436826_+	hypothetical protein	A0A2H5BQA0	Pseudomonas_phage	6.6e-180	71.7
WP_088540453.1\|3436890_3438147_+	oligosaccharide repeat unit polymerase	NA	NA	NA	NA
WP_088540454.1\|3438226_3438856_+	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	3.2e-111	95.7
WP_088540455.1\|3438852_3439221_+	hypothetical protein	H2BDA0	Pseudomonas_phage	7.9e-46	84.4
WP_033945997.1\|3439250_3439526_+	hypothetical protein	A0A0S2SYC6	Pseudomonas_phage	2.8e-35	98.7
WP_004349481.1\|3439561_3439825_+	hypothetical protein	B5WZU6	Pseudomonas_phage	4.3e-46	100.0

DBSCAN-SWA_5

4722414 : 4775376

Shigella_phage(22.22%)

transposase,integrase

attL 4751389:4751404|attR 4780415:4780430

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157738547.1\|4722414_4723561_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.0e-50	41.8
WP_088540560.1\|4723702_4724242_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_088540444.1\|4724919_4726116_+\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	7.0e-91	45.0
WP_157738548.1\|4726515_4727445_-	transporter	NA	NA	NA	NA
WP_023101045.1\|4727681_4728002_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_073660155.1\|4728013_4729243_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_073660154.1\|4729253_4730540_-	cytochrome P450	NA	NA	NA	NA
WP_088540562.1\|4730551_4731970_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_088540563.1\|4731981_4733097_-	NAD(P)-dependent alcohol dehydrogenase	E3SJ82	Synechococcus_phage	4.0e-16	26.3
WP_073660151.1\|4733363_4734515_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_088540564.1\|4734514_4735624_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_073660149.1\|4735620_4736517_-	3-hydroxyisobutyrate dehydrogenase	A0A077SLF7	Escherichia_phage	1.8e-27	31.5
WP_088540565.1\|4736550_4737324_-	enoyl-CoA hydratase	NA	NA	NA	NA
WP_073660147.1\|4737372_4738875_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_073660146.1\|4739027_4739918_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_088540626.1\|4739919_4740717_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_088540566.1\|4741082_4742405_+	MFS transporter	NA	NA	NA	NA
WP_088540567.1\|4742480_4743752_+	outer membrane porin, OprD family	NA	NA	NA	NA
WP_073660142.1\|4743757_4744531_+	tyrosine-protein phosphatase	NA	NA	NA	NA
WP_023100371.1\|4744678_4745794_-	hypothetical protein	NA	NA	NA	NA
WP_023100370.1\|4745796_4746273_-	hypothetical protein	NA	NA	NA	NA
WP_157738549.1\|4746269_4747244_-	phosphotransferase	NA	NA	NA	NA
WP_023100368.1\|4747393_4747849_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_088540569.1\|4747891_4748680_-	enoyl-CoA hydratase	NA	NA	NA	NA
WP_023100366.1\|4748692_4749868_-	hypothetical protein	NA	NA	NA	NA
WP_073660141.1\|4749903_4751070_-	acyl-CoA/acyl-ACP dehydrogenase	NA	NA	NA	NA
WP_023100364.1\|4751115_4751574_-	MaoC family dehydratase	NA	NA	NA	NA
4751389:4751404	attL	NA	NA	NA	NA
WP_073660140.1\|4751873_4752767_+	SDR family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	5.0e-25	31.6
WP_088540570.1\|4752786_4753707_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_088540627.1\|4754064_4754928_-	CoA ester lyase	NA	NA	NA	NA
WP_079867617.1\|4755124_4756576_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA
WP_023101029.1\|4756588_4757788_+	hypothetical protein	NA	NA	NA	NA
WP_088540571.1\|4757904_4758549_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_088540572.1\|4758563_4759820_-	acetyl-CoA hydrolase	NA	NA	NA	NA
WP_023100356.1\|4759816_4760215_-	hypothetical protein	NA	NA	NA	NA
WP_023100355.1\|4760211_4760628_-	hypothetical protein	NA	NA	NA	NA
WP_023100354.1\|4760617_4761916_-	hypothetical protein	NA	NA	NA	NA
WP_023100353.1\|4761946_4762738_-	2-ketocyclohexanecarboxyl-CoA hydrolase	NA	NA	NA	NA
WP_023100352.1\|4762789_4763557_-	glucose 1-dehydrogenase	NA	NA	NA	NA
WP_088540573.1\|4763619_4764771_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_157738550.1\|4764778_4766404_-	AMP-binding protein	A0A1V0SBX8	Catovirus	1.1e-11	23.7
WP_088540575.1\|4766890_4768876_+	acetoacetate--CoA ligase	NA	NA	NA	NA
WP_088540576.1\|4768885_4770070_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA
WP_049875173.1\|4770080_4770692_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_157738551.1\|4771478_4771787_+\|transposase	transposase	A9YX41	Burkholderia_phage	9.7e-13	43.5
WP_157738552.1\|4771906_4772251_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_157738547.1\|4772156_4773304_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.0e-50	41.8
WP_088540578.1\|4773426_4775376_-\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A0U1UNT3	Pseudomonas_phage	2.4e-104	49.6
4780415:4780430	attR	NA	NA	NA	NA

DBSCAN-SWA_6

4831927 : 4838821

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003090386.1\|4831927_4832596_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.5e-90	82.1
WP_016562011.1\|4832706_4833102_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	3.5e-47	71.3
WP_016562012.1\|4833098_4833458_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.1e-34	61.7
WP_003090391.1\|4833457_4833763_+	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_003119979.1\|4833759_4834095_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.5e-38	69.4
WP_003108776.1\|4834091_4835075_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	9.3e-142	74.3
WP_016852739.1\|4835162_4836137_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_003113366.1\|4836141_4837539_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003119978.1\|4837540_4838821_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.8e-97	45.2

DBSCAN-SWA_7

4962814 : 5002846

Shigella_phage(33.33%)

transposase,integrase,protease

attL 4964493:4964510|attR 4997766:4997783

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016852720.1\|4962814_4964698_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A2L0V0F4	Agrobacterium_phage	4.4e-39	32.3
4964493:4964510	attL	NA	NA	NA	NA
WP_003090610.1\|4964699_4965338_+	radical SAM protein	NA	NA	NA	NA
WP_016852719.1\|4965352_4971649_+	DUF4011 domain-containing protein	NA	NA	NA	NA
WP_016852718.1\|4971645_4972995_+	hypothetical protein	NA	NA	NA	NA
WP_086008657.1\|4973369_4974531_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	4.3e-85	53.6
WP_070087258.1\|4975256_4976666_+\|integrase	site-specific integrase	A0A2H4IYX8	uncultured_Caudovirales_phage	5.0e-56	34.6
WP_010953434.1\|4976659_4976953_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_017940300.1\|4976940_4977213_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_070087259.1\|4977338_4977584_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_058164160.1\|4977788_4978118_+	hypothetical protein	NA	NA	NA	NA
WP_045633504.1\|4978215_4979184_+	DUF932 domain-containing protein	A0A0H4INH5	Stenotrophomonas_phage	7.2e-62	42.2
WP_070087260.1\|4979258_4980263_+	YqaJ viral recombinase family protein	Q0H280	Geobacillus_phage	1.2e-46	37.1
WP_070087261.1\|4980340_4981255_+	hydrolase or metal-binding protein	NA	NA	NA	NA
WP_070087262.1\|4981304_4981802_+	DNA repair protein RadC	NA	NA	NA	NA
WP_087785413.1\|4983266_4984416_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.2e-101	66.3
WP_088540580.1\|4984409_4984664_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	5.9e-08	50.0
WP_088540581.1\|4984663_4984906_+	diguanylate cyclase	NA	NA	NA	NA
WP_083279670.1\|4985088_4985394_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_070087265.1\|4985877_4986825_+	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_099774191.1\|4987708_4988962_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_088540582.1\|4989175_4990338_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	2.9e-86	53.9
WP_070087343.1\|4991363_4991651_-	hypothetical protein	NA	NA	NA	NA
WP_014753615.1\|4991647_4991770_-	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA
WP_070087344.1\|4991792_4992929_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_014753617.1\|4992921_4994493_-	cytochrome bd oxidase subunit I	NA	NA	NA	NA
WP_070087345.1\|4994489_4994780_-	hypothetical protein	NA	NA	NA	NA
WP_070087346.1\|4994847_4996173_-	PAS domain-containing protein	NA	NA	NA	NA
WP_014753621.1\|4996408_4997287_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_070087347.1\|4997338_4999009_+	TIGR01244 family phosphatase	NA	NA	NA	NA
4997766:4997783	attR	NA	NA	NA	NA
WP_041167218.1\|4999036_4999840_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_058011951.1\|5000262_5000610_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_058011952.1\|5000744_5001098_+	hypothetical protein	NA	NA	NA	NA
WP_128551631.1\|5001259_5001811_+	hypothetical protein	NA	NA	NA	NA
WP_011270155.1\|5001865_5002846_+\|transposase	IS5-like element ISPa16 family transposase	A0A077K814	Ralstonia_phage	3.8e-95	58.0

DBSCAN-SWA_8

5067547 : 5116049

Vibrio_phage(14.29%)

tRNA,integrase,transposase,protease

attL 5089664:5089693|attR 5105183:5105212

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016852716.1\|5067547_5069926_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003090666.1\|5069960_5070977_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	7.9e-27	33.3
WP_003099086.1\|5071074_5071431_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_003090673.1\|5071454_5071649_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_003099089.1\|5071710_5072244_-	translation initiation factor IF-3	A0A2I7S9Q1	Vibrio_phage	2.0e-13	38.1
WP_016852715.1\|5072261_5074184_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	6.7e-128	38.5
WP_003116601.1\|5074433_5075297_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003090681.1\|5075488_5075815_+	hypothetical protein	NA	NA	NA	NA
WP_003099098.1\|5075899_5076076_+	hypothetical protein	NA	NA	NA	NA
WP_003090684.1\|5076401_5076689_-	DUF3509 domain-containing protein	NA	NA	NA	NA
WP_003090686.1\|5076887_5077121_-	hypothetical protein	NA	NA	NA	NA
WP_016852714.1\|5077174_5077957_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_003090688.1\|5077953_5078175_-	ParD-like family protein	NA	NA	NA	NA
WP_003119937.1\|5078923_5079151_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023093397.1\|5079252_5079843_+	hypothetical protein	NA	NA	NA	NA
WP_088540429.1\|5081163_5082711_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	9.2e-128	49.9
WP_039964958.1\|5082792_5083128_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_082065008.1\|5083124_5083493_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_023093395.1\|5083763_5084072_+	hypothetical protein	NA	NA	NA	NA
WP_023093394.1\|5084464_5085064_+	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA
WP_023093393.1\|5085217_5086468_-	TerD family protein	NA	NA	NA	NA
WP_023093392.1\|5086714_5087920_-	hypothetical protein	NA	NA	NA	NA
WP_088540460.1\|5088257_5089408_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	6.0e-100	64.4
5089664:5089693	attL	NA	NA	NA	NA
WP_010921731.1\|5089688_5092655_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	98.9
WP_010921730.1\|5092658_5093219_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	1.9e-59	99.2
WP_000845048.1\|5093585_5094599_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_015059044.1\|5094787_5095342_+	aminoglycoside 6'-N-acetyltransferase AAC(6')-33	NA	NA	NA	NA
WP_001206317.1\|5095470_5096262_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_001007673.1\|5096338_5097166_+	oxacillin-hydrolyzing class D beta-lactamase OXA-2	NA	NA	NA	NA
WP_000679427.1\|5097301_5097649_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|5097642_5098482_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000376623.1\|5098609_5099110_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004152787.1\|5099092_5099233_-	hypothetical protein	NA	NA	NA	NA
WP_001389365.1\|5099616_5100381_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_003132006.1\|5100603_5101593_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_003132004.1\|5101589_5101826_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_000995360.1\|5101822_5102188_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_003158917.1\|5102205_5103891_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-40	29.3
WP_003131987.1\|5103962_5104238_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_003131974.1\|5104250_5104601_-	mercuric ion transporter MerT	NA	NA	NA	NA
WP_003131969.1\|5104672_5105107_+	mercury resistance transcriptional regulator MerR	NA	NA	NA	NA
WP_023093389.1\|5105728_5106922_-	DUF4236 domain-containing protein	NA	NA	NA	NA
5105183:5105212	attR	NA	NA	NA	NA
WP_023093388.1\|5107034_5108366_-	hypothetical protein	NA	NA	NA	NA
WP_003090776.1\|5108740_5109319_-	TerD family protein	NA	NA	NA	NA
WP_003090777.1\|5109354_5109933_-	TerD family protein	K4JRX3	Caulobacter_phage	2.5e-30	39.8
WP_003090778.1\|5109961_5110996_-	TerC/Alx family metal homeostasis membrane protein	A0A291LBC5	Escherichia_phage	6.5e-69	45.9
WP_003090780.1\|5111008_5111458_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_088540586.1\|5111505_5112687_-	tellurium resistance protein TerA	NA	NA	NA	NA
WP_003090782.1\|5112683_5113277_-	TerD family protein	A0A2I7QY07	Vibrio_phage	2.4e-23	37.4
WP_023093387.1\|5113279_5114008_-	HAD-IB family hydrolase	NA	NA	NA	NA
WP_023093386.1\|5114007_5114955_-	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_023093385.1\|5114954_5116049_-\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	8.2e-38	34.4

DBSCAN-SWA_9

5172650 : 5240333

Pseudomonas_phage(62.0%)

transposase,integrase,terminase,holin

attL 5229886:5229900|attR 5241211:5241225

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023082393.1\|5172650_5173166_+	hypothetical protein	L7TIE6	Pseudomonas_virus	3.2e-101	100.0
WP_023082392.1\|5173291_5173669_+	helix-turn-helix transcriptional regulator	L7TKV7	Pseudomonas_virus	1.1e-63	100.0
WP_023082391.1\|5173658_5174141_+	hypothetical protein	L7THB5	Pseudomonas_virus	1.2e-89	99.4
WP_023082390.1\|5174533_5174800_-	hypothetical protein	L7TP56	Pseudomonas_virus	6.3e-45	100.0
WP_071536974.1\|5174837_5175332_-	DUF4124 domain-containing protein	A0A2K8IBL8	Pseudomonas_phage	2.2e-83	95.2
WP_019486210.1\|5175399_5175993_-	DUF1737 domain-containing protein	L7TKV3	Pseudomonas_virus	9.1e-76	100.0
WP_023082389.1\|5176003_5176525_-	hypothetical protein	L7THB0	Pseudomonas_virus	4.1e-72	100.0
WP_023082388.1\|5176528_5177056_-	glycoside hydrolase family protein	L7TJR2	Pseudomonas_virus	6.2e-100	100.0
WP_015975423.1\|5177039_5177297_-\|holin	holin	A0A0U1UNM6	Pseudomonas_phage	2.1e-37	100.0
WP_023082384.1\|5191289_5193182_-	hypothetical protein	A0A0U1SZM6	Pseudomonas_phage	9.4e-183	99.3
WP_031668823.1\|5193181_5193787_-	hypothetical protein	Q5QF56	Pseudomonas_virus	2.1e-107	98.5
WP_023082382.1\|5194337_5196947_-	hypothetical protein	A0A0U1W0G7	Pseudomonas_phage	0.0e+00	93.6
WP_023082381.1\|5196951_5197542_-	hypothetical protein	A0A0U1VYN6	Pseudomonas_phage	2.8e-101	99.5
WP_019486217.1\|5197609_5198800_-	hypothetical protein	A0A2K8HL79	Pseudomonas_phage	3.8e-222	97.7
WP_023082380.1\|5198799_5201763_-	hypothetical protein	A0A0U1W084	Pseudomonas_phage	0.0e+00	98.3
WP_023082379.1\|5201765_5202623_-	hypothetical protein	L7TJQ4	Pseudomonas_virus	4.0e-157	99.6
WP_010793300.1\|5202622_5203048_-	hypothetical protein	A0A2K8HN63	Pseudomonas_phage	5.9e-85	100.0
WP_004349209.1\|5203071_5203479_-	hypothetical protein	A0A0U1UNR7	Pseudomonas_phage	8.7e-70	100.0
WP_004349207.1\|5203459_5203666_-	hypothetical protein	A0A0U1SXT5	Pseudomonas_phage	1.3e-29	100.0
WP_023082378.1\|5203662_5204340_-	hypothetical protein	L7TH94	Pseudomonas_virus	3.0e-131	99.1
WP_016263604.1\|5205272_5205752_-	hypothetical protein	L7TP37	Pseudomonas_virus	6.4e-80	100.0
WP_023082376.1\|5205810_5207103_-	DUF4043 family protein	A0A0U1VYN1	Pseudomonas_phage	2.2e-252	100.0
WP_065423640.1\|5207115_5208246_-	hypothetical protein	Q5QF43	Pseudomonas_virus	4.2e-178	97.6
WP_023082375.1\|5208392_5210711_-	hypothetical protein	A0A2K8HKC3	Pseudomonas_phage	0.0e+00	99.7
WP_023082374.1\|5210720_5212004_-\|terminase	PBSX family phage terminase large subunit	A0A2K8HZU7	Pseudomonas_phage	1.2e-258	99.5
WP_004349191.1\|5212000_5212567_-	hypothetical protein	A0A2K8HN72	Pseudomonas_phage	4.2e-94	94.7
WP_023980885.1\|5212719_5212944_+	hypothetical protein	A0A0U1UNS7	Pseudomonas_phage	2.7e-33	98.6
WP_004349189.1\|5212946_5213441_-	hypothetical protein	A0A0U1VYN2	Pseudomonas_phage	3.2e-82	99.4
WP_023082373.1\|5213519_5214134_-	hypothetical protein	A0A0U1VZM0	Pseudomonas_phage	9.0e-111	98.5
WP_023082372.1\|5214189_5214741_-	hypothetical protein	A0A2K8I9A9	Pseudomonas_phage	1.7e-100	99.5
WP_023082371.1\|5215576_5216545_-	hypothetical protein	A0A0U1UNR4	Pseudomonas_phage	6.0e-85	100.0
WP_004354958.1\|5216582_5216822_-	helix-turn-helix domain-containing protein	D0UIL8	Aggregatibacter_phage	3.2e-11	54.1
WP_023082370.1\|5217842_5218439_-	hypothetical protein	NA	NA	NA	NA
WP_023082369.1\|5218515_5218728_+	hypothetical protein	A0A0U1VYM8	Pseudomonas_phage	7.1e-31	94.3
WP_088540587.1\|5218762_5218906_+	carbon storage regulator CsrA	A0A0U1UNS3	Pseudomonas_phage	7.9e-18	100.0
WP_088540460.1\|5218965_5220115_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	6.0e-100	64.4
WP_023082367.1\|5220451_5220664_+	hypothetical protein	NA	NA	NA	NA
WP_023082366.1\|5220667_5220931_+	hypothetical protein	NA	NA	NA	NA
WP_023082364.1\|5221233_5221455_+	hypothetical protein	A0A0U1SZL8	Pseudomonas_phage	9.3e-34	94.5
WP_004354971.1\|5221451_5221823_+	hypothetical protein	A0A2K8HNX4	Pseudomonas_phage	3.4e-60	99.2
WP_023082363.1\|5222093_5222792_+	hypothetical protein	A0A1Y0T023	Pseudomonas_phage	1.2e-31	54.3
WP_023082362.1\|5222788_5224426_+	hypothetical protein	A0A2H4J6F0	uncultured_Caudovirales_phage	1.0e-137	62.6
WP_004349164.1\|5224547_5225153_+	3'-5' exonuclease	A0A0U1W072	Pseudomonas_phage	7.3e-113	100.0
WP_023082361.1\|5225156_5225654_+	single-stranded DNA-binding protein	L7TJL2	Pseudomonas_virus	1.6e-89	97.0
WP_023082360.1\|5225680_5226607_+	recombination-associated protein RdgC	A0A0U1SXS1	Pseudomonas_phage	6.4e-169	99.7
WP_023082359.1\|5226633_5227689_+	nucleoid-associated protein YejK	A0A2K8HR80	Pseudomonas_phage	5.6e-201	99.7
WP_073662603.1\|5227706_5227895_+	hypothetical protein	A0A0U1UNR9	Pseudomonas_phage	4.2e-27	98.4
WP_124117754.1\|5228060_5228387_-	hypothetical protein	NA	NA	NA	NA
WP_023082357.1\|5228502_5230404_+	hypothetical protein	A0A0U1T6D1	Pseudomonas_phage	6.3e-288	93.5
5229886:5229900	attL	NA	NA	NA	NA
WP_021263571.1\|5230418_5230832_-	hypothetical protein	L7TJK7	Pseudomonas_virus	7.5e-69	99.3
WP_021263570.1\|5231085_5231514_+	hypothetical protein	H2BD44	Pseudomonas_phage	1.6e-69	93.0
WP_023082356.1\|5231510_5232167_+	hypothetical protein	Q5QF30	Pseudomonas_virus	4.2e-106	82.2
WP_023082355.1\|5232163_5232805_+	hypothetical protein	Q5QF31	Pseudomonas_virus	2.5e-119	93.4
WP_071536973.1\|5232872_5233727_-	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_023082353.1\|5233723_5234566_-	hypothetical protein	NA	NA	NA	NA
WP_003160559.1\|5235043_5235328_+	hypothetical protein	A0A2K8HN48	Pseudomonas_phage	8.0e-46	100.0
WP_009681710.1\|5235604_5236735_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_009681709.1\|5236731_5238423_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_009681708.1\|5238419_5240333_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
5241211:5241225	attR	NA	NA	NA	NA

DBSCAN-SWA_10

6259489 : 6268518

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003092260.1\|6259489_6260530_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.5e-113	59.5
WP_003129950.1\|6260663_6261170_-	CinA family protein	B5TK85	Pseudomonas_phage	1.8e-56	76.0
WP_003098486.1\|6261317_6262325_+	TolB family protein	NA	NA	NA	NA
WP_003113873.1\|6262450_6265018_+	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	3.2e-24	22.1
WP_003119354.1\|6265084_6265408_+	ferredoxin family protein	NA	NA	NA	NA
WP_003113871.1\|6265834_6266839_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	7.0e-36	37.3
WP_016852568.1\|6266943_6267837_-	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	3.0e-06	34.3
WP_003098558.1\|6267882_6268518_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-40	52.3

DBSCAN-SWA_11

6937697 : 6981290

Pseudomonas_phage(90.91%)

tRNA,holin,terminase,transposase,lysis,integrase,protease,portal

attL 6947703:6947720|attR 6985576:6985593

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003105684.1\|6937697_6938936_-\|tRNA	tyrosine--tRNA ligase	A0A2C9CX69	Yersinia_phage	7.8e-53	33.3
WP_019396596.1\|6939273_6940296_+	hypothetical protein	NA	NA	NA	NA
WP_023086978.1\|6940612_6940852_-	hypothetical protein	A0A0A0YQ17	Pseudomonas_phage	1.9e-32	93.3
WP_003129768.1\|6940848_6941151_-	hypothetical protein	A0A0A0YUD8	Pseudomonas_phage	2.3e-43	89.0
WP_071538201.1\|6941150_6941714_-	hypothetical protein	A0A0A0YRS1	Pseudomonas_phage	5.4e-62	69.5
WP_003159488.1\|6941706_6941988_-	hypothetical protein	A0A1W6JTD4	Pseudomonas_phage	7.9e-46	98.9
WP_077446912.1\|6941987_6942548_-	hypothetical protein	A0A0U4JIY3	Pseudomonas_phage	1.5e-99	98.9
WP_003159082.1\|6942552_6942744_-	hypothetical protein	A0A1B0Z2L3	Pseudomonas_phage	3.5e-29	98.4
WP_077446911.1\|6942736_6943324_-	hypothetical protein	A0A1B0Z051	Pseudomonas_phage	6.0e-104	95.4
WP_077446910.1\|6943353_6945012_-	hypothetical protein	A0A0A0YRR5	Pseudomonas_phage	0.0e+00	98.9
WP_023110596.1\|6945008_6945413_-	hypothetical protein	A0A0A0YR47	Pseudomonas_phage	9.0e-67	99.3
WP_077446909.1\|6945423_6945969_-	hypothetical protein	A0A1B0YZV4	Pseudomonas_phage	1.6e-90	92.3
WP_077446908.1\|6945968_6946382_-	hypothetical protein	A0A1W6JT78	Pseudomonas_phage	2.3e-54	92.4
WP_077446907.1\|6946384_6948094_-	hypothetical protein	A0A1W6JTA3	Pseudomonas_phage	4.8e-303	92.4
6947703:6947720	attL	NA	NA	NA	NA
WP_016852557.1\|6948093_6948615_-	hypothetical protein	A0A1W6JT98	Pseudomonas_phage	3.7e-97	98.3
WP_003159479.1\|6948655_6951139_-	tape measure protein	A0A1B0YZV6	Pseudomonas_phage	0.0e+00	98.8
WP_010791966.1\|6951241_6951544_-	hypothetical protein	A0A1B0YZV7	Pseudomonas_phage	7.0e-48	99.0
WP_071535696.1\|6951608_6952136_-	DUF4124 domain-containing protein	A0A1B0Z2K9	Pseudomonas_phage	4.3e-93	98.9
WP_050397059.1\|6952207_6952729_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	A0A1B0YZT9	Pseudomonas_phage	1.8e-91	99.4
WP_003129705.1\|6952810_6953563_-	hypothetical protein	A0A1B0YZT8	Pseudomonas_phage	9.9e-136	98.4
WP_003159478.1\|6953564_6953759_-	hypothetical protein	A0A1W6JT79	Pseudomonas_phage	2.2e-26	95.3
WP_016852556.1\|6953762_6954233_-	hypothetical protein	A0A1W6JT75	Pseudomonas_phage	5.9e-86	98.7
WP_003159073.1\|6954229_6954559_-	hypothetical protein	A0A1B0YZU3	Pseudomonas_phage	6.8e-57	99.1
WP_003129701.1\|6954555_6954873_-	DUF2190 family protein	A0A1W6JT93	Pseudomonas_phage	4.6e-50	100.0
WP_016852555.1\|6954939_6957033_-\|protease	Clp protease ClpP	A0A1W6JT88	Pseudomonas_phage	0.0e+00	99.1
WP_019486499.1\|6956992_6958639_-\|portal	phage portal protein	A0A1W6JTB6	Pseudomonas_phage	0.0e+00	99.8
WP_003159069.1\|6958638_6958854_-	hypothetical protein	A0A1W6JT66	Pseudomonas_phage	6.5e-32	100.0
WP_031761066.1\|6958844_6960809_-\|terminase	phage terminase large subunit family protein	A0A1B0Z2K0	Pseudomonas_phage	0.0e+00	98.6
WP_019486501.1\|6960780_6961326_-	DNA packaging protein	A0A1B0Z033	Pseudomonas_phage	1.6e-95	99.4
WP_016852553.1\|6961445_6962189_-	hypothetical protein	A0A1B0Z000	Pseudomonas_phage	1.4e-134	99.2
WP_016852552.1\|6962185_6962656_-\|lysis	lysis protein Rz	A0A1B0Z001	Pseudomonas_phage	9.1e-71	91.7
WP_016852551.1\|6962652_6962895_-	hypothetical protein	A0A0H5AWC3	Pseudomonas_phage	8.4e-20	51.9
WP_034081336.1\|6962891_6963509_-	glycoside hydrolase family 19 protein	A0A0U4JP23	Pseudomonas_phage	2.4e-103	89.7
WP_023086963.1\|6963505_6963838_-\|holin	phage holin, lambda family	A0A1W6JTC7	Pseudomonas_phage	2.2e-55	98.2
WP_004353175.1\|6964625_6965015_-	hypothetical protein	A0A1W6JTD2	Pseudomonas_phage	2.2e-70	99.2
WP_023086962.1\|6965011_6965290_-	hypothetical protein	A0A1W6JTC1	Pseudomonas_phage	1.2e-43	95.7
WP_023086961.1\|6965286_6966684_-	AAA family ATPase	A0A1W6JTB3	Pseudomonas_phage	1.2e-262	98.7
WP_049238134.1\|6966680_6967301_-	AAA family ATPase	A0A1W6JTD8	Pseudomonas_phage	6.5e-109	99.0
WP_023086959.1\|6967476_6968316_-	helix-turn-helix domain-containing protein	A0A1W6JTD5	Pseudomonas_phage	7.9e-150	96.1
WP_023086958.1\|6968312_6968543_-	hypothetical protein	A0A1W6JTF8	Pseudomonas_phage	2.2e-38	96.1
WP_023086957.1\|6968539_6968848_-	hypothetical protein	NA	NA	NA	NA
WP_044069802.1\|6969635_6969998_-	hypothetical protein	A0A1W6JTB9	Pseudomonas_phage	9.8e-57	90.8
WP_077446906.1\|6970123_6970447_-	hypothetical protein	A0A0A0YWH5	Pseudomonas_phage	9.1e-46	92.2
WP_019396627.1\|6970443_6970722_-	hypothetical protein	A0A1W6JTC3	Pseudomonas_phage	4.9e-40	97.8
WP_019396628.1\|6970718_6971069_-	hypothetical protein	NA	NA	NA	NA
WP_010791994.1\|6971256_6971478_+	hypothetical protein	NA	NA	NA	NA
WP_128662536.1\|6971449_6971776_+	hypothetical protein	NA	NA	NA	NA
WP_077446905.1\|6972170_6972845_+	S24 family peptidase	A0A1W6JTC8	Pseudomonas_phage	6.8e-128	99.6
WP_088540609.1\|6972848_6973130_+	DUF3800 domain-containing protein	A0A1W6JTE9	Pseudomonas_phage	1.3e-43	98.9
WP_088540460.1\|6973126_6974277_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	6.0e-100	64.4
WP_157738555.1\|6974313_6974793_+	DUF3800 domain-containing protein	A0A1W6JTE9	Pseudomonas_phage	6.2e-83	100.0
WP_077446903.1\|6975455_6975833_+	helix-turn-helix transcriptional regulator	A0A1W6JTA9	Pseudomonas_phage	4.4e-60	97.6
WP_077446902.1\|6975843_6976134_+	hypothetical protein	A0A1W6JTA7	Pseudomonas_phage	6.3e-46	97.9
WP_077446901.1\|6976144_6976930_+	phage antirepressor	A0A1W6JTB0	Pseudomonas_phage	3.1e-140	94.3
WP_023093227.1\|6977004_6977235_+	Arc family DNA-binding protein	A0A1W6JTB4	Pseudomonas_phage	4.7e-28	86.5
WP_077446900.1\|6977237_6978488_+	hypothetical protein	Q5QF38	Pseudomonas_virus	6.2e-42	92.9
WP_010792000.1\|6978600_6978792_+	hypothetical protein	A0A1W6JTB8	Pseudomonas_phage	8.6e-28	100.0
WP_003158847.1\|6978964_6979654_+	hypothetical protein	A0A0A0YUE3	Pseudomonas_phage	1.1e-29	37.2
WP_003158848.1\|6979658_6980015_+	hypothetical protein	NA	NA	NA	NA
WP_003158850.1\|6979998_6980241_+	DUF4224 domain-containing protein	A0A2H4JF29	uncultured_Caudovirales_phage	1.1e-16	60.3
WP_003129398.1\|6980240_6981290_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	1.3e-101	53.7
6985576:6985593	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP022001.1|WP_003158159.1|1785725_1786049_-|hypothetical-protein

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Acr_ID: NZ_CP022001.1|WP_003158160.1|1786067_1786460_-|hypothetical-protein

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Acr_ID: NZ_CP022001.1|WP_003158163.1|1788201_1788576_-|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP022001.1|WP_003158159.1|1785725_1786049_-|hypothetical-protein

1785725_1786049_-

107 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|15	0.6213592233009708	0.9719626168224299	0.99

NZ_CP022001.1|WP_003158160.1|1786067_1786460_-|hypothetical-protein

1786067_1786460_-

130 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|3	0.4251968503937008	0.9307692307692308	0.8785714285714286

NZ_CP022001.1|WP_003158163.1|1788201_1788576_-|hypothetical-protein

1788201_1788576_-

124 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|27	1.0	1	1.0

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022001

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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Click the colored protein region to show detailed information

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