CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022058	Chryseobacterium indologenes strain FDAARGOS_337 chromosome, complete genome	2 crisprs	DEDDh,csa3,cas3,cas2,cas1,cas9,PD-DExK,WYL	1	20	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022058_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022058_1

1830760-1833962

TypeII

Consensus_repeat	Method
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CRISPRCasFinder
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	PILER-CR
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	PILER-CR

41 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP022058_1

>merge|NZ_CP022058|1|1830760-1833962|CRISPRCasFinder,PILER-CR,PILER-CR
TCTTATATCATTTTCAAAAATTTATTATCTTCGTGATTAGTCACAGCCATTTTAATGCTTACAGAATCGTCTGATAAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCAATTCGTGCAATTCCTTCTCTTGCATTAGAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCATTGATGGATAAAGTTCTCCTTCTGCTTCCGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTGTTAATGAAGCAATTGCGCAATCTAATGTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCAATTCGTGCAATTCCTTCTCTTGCATTAGAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCATTGATGGATAAAGTTCTCCTTCTGCTTCCGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTGTTAATGAAGCAATTGCGCAATCTAATGTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCAGGTAATGCTTGAATATCTGTAACTTTACTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCCATGATACATTAGAACATTGTGGTTTATCAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGGTTTATTAATTTCATAGCCCAAAGACCCAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCAAAATTTCACGTTCATTAATCATGATATTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCATTGATGGATAAAGTTCTCCTTCTGCTTCCGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTGTTAATGAAGCAATTGCGCAATCTAATGTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCCTTCTAAACGCTCGATTAGTGGCTGAACAAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCCAGTAAAAACTGAATCATACAGATGATAAGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGCATGATTAGACATTGTTTACACCTCGAAAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCAATAAGACAGAATACAACTTCTGGCGACCCGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTTCGGTTATTATCGCAATATCTTTACTTGTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTTCGGTTATTATCGCAATATCTTTACTTGTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTTGCGTAGATTGAATCATGTGCGTCATGGTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGGTTAATCGCTCAATTACTGCGGCAGAAAAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCATCTCGTGCGCTATGGTTCCTTCACGTGCGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTTAGTTGCAATATATATCTTTGCAATGCAGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCCCAGCTTGCCACATTCACTAAGCCGACAATGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCCTTATCAAGGTGTCCTGATATTACATAATAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTTTGGGATCGTAGTCTTTATAAAGCCGCCAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTTTTCTTTTTGGCCACCCAGCATCTGGCAAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCAGTATTAGGCAAAGGATTACTTACGAAAGCGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGGTTGCCCGTCAAAAGGTGATCACTTATTTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTCGCATTTGTTCAACTGTTTCATTTTCATAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCATTTTCTGGAGATTCAATCATATACGCTTCGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCAGAGATGTGGAAAGCTTTACAAAATGGATGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCATAGCAATTACCTTAGCCATTGTATCTATAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGCTATAGGATCTGCTGCTAATCCTTTGTTAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCAATCTTACTACCCGTATAGATGGCTATTGCGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTATATTTTATTAAACATGTGCATTCTAGCAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCCGTTACCAAATGTGTACGTTAAACTGGATGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCATGCAGATAGATCTGCCTTAGATCTTAGTTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGTAGTTTCCTCTTTAGCCGTCTCAGTTCCTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGAATGGTATAAAAGTCAGTACGAGCTGTTAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGGAATTTTTTGATAATTGTGGGTTTGGAGGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC

>NZ_CP022058|1|1|1830760-1833962|CRISPRCasFinder
TCTTATATCATTTTCAAAAATTTATTATCTTCGTGATTAGTCACAGC	CATTTTAATGCTTACAGAATCGTCTGATAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AATTCGTGCAATTCCTTCTCTTGCATTAGA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATTGATGGATAAAGTTCTCCTTCTGCTTCC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TGTTAATGAAGCAATTGCGCAATCTAATGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AATTCGTGCAATTCCTTCTCTTGCATTAGA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATTGATGGATAAAGTTCTCCTTCTGCTTCC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TGTTAATGAAGCAATTGCGCAATCTAATGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AGGTAATGCTTGAATATCTGTAACTTTACT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CATGATACATTAGAACATTGTGGTTTATCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GGTTTATTAATTTCATAGCCCAAAGACCCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AAAATTTCACGTTCATTAATCATGATATT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATTGATGGATAAAGTTCTCCTTCTGCTTCC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TGTTAATGAAGCAATTGCGCAATCTAATGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CTTCTAAACGCTCGATTAGTGGCTGAACAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CAGTAAAAACTGAATCATACAGATGATAAG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GCATGATTAGACATTGTTTACACCTCGAAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AATAAGACAGAATACAACTTCTGGCGACCC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTCGGTTATTATCGCAATATCTTTACTTGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTCGGTTATTATCGCAATATCTTTACTTGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTGCGTAGATTGAATCATGTGCGTCATGGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GGTTAATCGCTCAATTACTGCGGCAGAAAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATCTCGTGCGCTATGGTTCCTTCACGTGCG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTAGTTGCAATATATATCTTTGCAATGCAG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CCAGCTTGCCACATTCACTAAGCCGACAAT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CTTATCAAGGTGTCCTGATATTACATAATA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTTGGGATCGTAGTCTTTATAAAGCCGCCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTTTCTTTTTGGCCACCCAGCATCTGGCAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AGTATTAGGCAAAGGATTACTTACGAAAGC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GGTTGCCCGTCAAAAGGTGATCACTTATTT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TCGCATTTGTTCAACTGTTTCATTTTCATA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATTTTCTGGAGATTCAATCATATACGCTTC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AGAGATGTGGAAAGCTTTACAAAATGGATG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATAGCAATTACCTTAGCCATTGTATCTATA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GCTATAGGATCTGCTGCTAATCCTTTGTTA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AATCTTACTACCCGTATAGATGGCTATTGC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TATATTTTATTAAACATGTGCATTCTAGCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CGTTACCAAATGTGTACGTTAAACTGGATG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATGCAGATAGATCTGCCTTAGATCTTAGTT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GTAGTTTCCTCTTTAGCCGTCTCAGTTCCT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GAATGGTATAAAAGTCAGTACGAGCTGTTA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GGAATTTTTTGATAATTGTGGGTTTGGAGG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC

>NZ_CP022058|1|1|1830837-1833962|PILER-CR
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AATTCGTGCAATTCCTTCTCTTGCATTAGA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATTGATGGATAAAGTTCTCCTTCTGCTTCC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TGTTAATGAAGCAATTGCGCAATCTAATGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AATTCGTGCAATTCCTTCTCTTGCATTAGA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATTGATGGATAAAGTTCTCCTTCTGCTTCC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TGTTAATGAAGCAATTGCGCAATCTAATGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AGGTAATGCTTGAATATCTGTAACTTTACT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CATGATACATTAGAACATTGTGGTTTATCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GGTTTATTAATTTCATAGCCCAAAGACCCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AAAATTTCACGTTCATTAATCATGATATT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATTGATGGATAAAGTTCTCCTTCTGCTTCC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TGTTAATGAAGCAATTGCGCAATCTAATGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CTTCTAAACGCTCGATTAGTGGCTGAACAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CAGTAAAAACTGAATCATACAGATGATAAG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GCATGATTAGACATTGTTTACACCTCGAAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AATAAGACAGAATACAACTTCTGGCGACCC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTCGGTTATTATCGCAATATCTTTACTTGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTCGGTTATTATCGCAATATCTTTACTTGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTGCGTAGATTGAATCATGTGCGTCATGGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GGTTAATCGCTCAATTACTGCGGCAGAAAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATCTCGTGCGCTATGGTTCCTTCACGTGCG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTAGTTGCAATATATATCTTTGCAATGCAG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CCAGCTTGCCACATTCACTAAGCCGACAAT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CTTATCAAGGTGTCCTGATATTACATAATA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTTGGGATCGTAGTCTTTATAAAGCCGCCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTTTCTTTTTGGCCACCCAGCATCTGGCAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AGTATTAGGCAAAGGATTACTTACGAAAGC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GGTTGCCCGTCAAAAGGTGATCACTTATTT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TCGCATTTGTTCAACTGTTTCATTTTCATA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATTTTCTGGAGATTCAATCATATACGCTTC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AGAGATGTGGAAAGCTTTACAAAATGGATGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCATAGCAATTACCTTAGCCATTGTATCTATAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGCTATAGGATCTGCTGCTAATCCTTTGTTAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCAATCTTACTACCCGTATAGATGGCTATTGCGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTATATTTTATTAAACATGTGCATTCTAGCAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCCGTTACCAAATGTGTACGTTAAACTGGATGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCATGCAGATAGATCTGCCTTAGATCTTAGTTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGTAGTTTCCTCTTTAGCCGTCTCAGTTCCTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGAATGGTATAAAAGTCAGTACGAGCTGTTAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGGAATTTTTTGATAATTGTGGGTTTGGAGG
	ATGCAGATAGATCTGCCTTAGATCTTAGTT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GTAGTTTCCTCTTTAGCCGTCTCAGTTCCT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GAATGGTATAAAAGTCAGTACGAGCTGTTA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GGAATTTTTTGATAATTGTGGGTTTGGAGG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC

>NZ_CP022058|1|2|1833608-1833962|PILER-CR
	AATTCGTGCAATTCCTTCTCTTGCATTAGA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATTGATGGATAAAGTTCTCCTTCTGCTTCC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TGTTAATGAAGCAATTGCGCAATCTAATGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AATTCGTGCAATTCCTTCTCTTGCATTAGA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATTGATGGATAAAGTTCTCCTTCTGCTTCC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TGTTAATGAAGCAATTGCGCAATCTAATGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AGGTAATGCTTGAATATCTGTAACTTTACT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CATGATACATTAGAACATTGTGGTTTATCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GGTTTATTAATTTCATAGCCCAAAGACCCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AAAATTTCACGTTCATTAATCATGATATT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATTGATGGATAAAGTTCTCCTTCTGCTTCC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TGTTAATGAAGCAATTGCGCAATCTAATGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CTTCTAAACGCTCGATTAGTGGCTGAACAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CAGTAAAAACTGAATCATACAGATGATAAG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GCATGATTAGACATTGTTTACACCTCGAAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AATAAGACAGAATACAACTTCTGGCGACCC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTCGGTTATTATCGCAATATCTTTACTTGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTCGGTTATTATCGCAATATCTTTACTTGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTGCGTAGATTGAATCATGTGCGTCATGGT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GGTTAATCGCTCAATTACTGCGGCAGAAAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATCTCGTGCGCTATGGTTCCTTCACGTGCG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTAGTTGCAATATATATCTTTGCAATGCAG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CCAGCTTGCCACATTCACTAAGCCGACAAT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	CTTATCAAGGTGTCCTGATATTACATAATA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTTGGGATCGTAGTCTTTATAAAGCCGCCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TTTTCTTTTTGGCCACCCAGCATCTGGCAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AGTATTAGGCAAAGGATTACTTACGAAAGC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GGTTGCCCGTCAAAAGGTGATCACTTATTT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	TCGCATTTGTTCAACTGTTTCATTTTCATA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	ATTTTCTGGAGATTCAATCATATACGCTTC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	AGAGATGTGGAAAGCTTTACAAAATGGATGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCATAGCAATTACCTTAGCCATTGTATCTATAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGCTATAGGATCTGCTGCTAATCCTTTGTTAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCAATCTTACTACCCGTATAGATGGCTATTGCGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCTATATTTTATTAAACATGTGCATTCTAGCAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCCGTTACCAAATGTGTACGTTAAACTGGATGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCATGCAGATAGATCTGCCTTAGATCTTAGTTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGTAGTTTCCTCTTTAGCCGTCTCAGTTCCTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGAATGGTATAAAAGTCAGTACGAGCTGTTAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGCGGAATTTTTTGATAATTGTGGGTTTGGAGG
	ATGCAGATAGATCTGCCTTAGATCTTAGTT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GTAGTTTCCTCTTTAGCCGTCTCAGTTCCT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GAATGGTATAAAAGTCAGTACGAGCTGTTA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	GGAATTTTTTGATAATTGTGGGTTTGGAGG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022058.2\|WP_088583859.1\|1829239_1829788_-\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153228
NZ_CP022058.2\|WP_027373301.1\|1845559_1845736_-\|histone-H1	unknown	unknown	unknown
NZ_CP022058.2\|WP_172957723.1\|1841448_1842084_+\|HAD-hydrolase-like-protein	unknown	unknown	gnl\|CDD\|223620
NZ_CP022058.2\|WP_034735329.1\|1834355_1835249_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP022058.2\|WP_088585039.1\|1845982_1847401_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP022058.2\|WP_027373290.1\|1828428_1828683_-\|DUF1294-domain-containing-protein	unknown	unknown	gnl\|CDD\|377743
NZ_CP022058.2\|WP_027373293.1\|1829931_1830609_-\|YceI-family-protein	unknown	unknown	gnl\|CDD\|377274
NZ_CP022058.2\|WP_088583858.1\|1828798_1829155_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022058.2\|WP_185133770.1\|1844215_1845307_-\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379297
NZ_CP022058.2\|WP_027373289.1\|1826387_1828193_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|273597
NZ_CP022058.2\|WP_027373303.1\|1847519_1848032_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022058.2\|WP_034678328.1\|1834020_1834359_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP022058.2\|WP_034735383.1\|1823794_1824346_-\|ferritin	unknown	unknown	gnl\|CDD\|153113
NZ_CP022058.2\|WP_088583861.1\|1839278_1841402_+\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
NZ_CP022058.2\|WP_164464837.1\|1822174_1822333_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022058.2\|WP_088583857.1\|1824637_1826257_-\|family-10-glycosylhydrolase	unknown	unknown	gnl\|CDD\|224563
NZ_CP022058.2\|WP_027373286.1\|1822523_1823615_-\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_CP022058.2\|WP_185133769.1\|1835254_1839127_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NZ_CP022058.2\|WP_027373299.1\|1842495_1844052_-\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349937
NZ_CP022058.2\|WP_164464836.1\|1821948_1822110_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP022058.2\|WP_088583859.1\|1829239_1829788_-\|type-1-glutamine-amidotransferase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	5.55023e-85
NZ_CP022058.2\|WP_172957723.1\|1841448_1842084_+\|HAD-hydrolase-like-protein	gnl\|CDD\|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	1.35032e-30
NZ_CP022058.2\|WP_034735329.1\|1834355_1835249_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	7.12289e-94
NZ_CP022058.2\|WP_088585039.1\|1845982_1847401_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	7.12245e-107
NZ_CP022058.2\|WP_027373290.1\|1828428_1828683_-\|DUF1294-domain-containing-protein	gnl\|CDD\|377743	pfam06961, DUF1294, Protein of unknown function (DUF1294). This family includes a number of hypothetical bacterial and archaeal proteins of unknown function.	4.9883e-20
NZ_CP022058.2\|WP_027373293.1\|1829931_1830609_-\|YceI-family-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	1.13046e-27
NZ_CP022058.2\|WP_027373289.1\|1826387_1828193_-\|translational-GTPase-TypA	gnl\|CDD\|273597	TIGR01394, GTP-binding_protein_TypA/BipA_homolog, GTP-binding protein TypA/BipA. This bacterial (and Arabidopsis) protein, termed TypA or BipA, a GTP-binding protein, is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown. [Regulatory functions, Other, Cellular processes, Adaptations to atypical conditions, Protein synthesis, Translation factors].	0
NZ_CP022058.2\|WP_034678328.1\|1834020_1834359_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	5.44341e-21
NZ_CP022058.2\|WP_034735383.1\|1823794_1824346_-\|ferritin	gnl\|CDD\|153113	cd01055, Nonheme_Ferritin, nonheme-containing ferritins. Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.	1.20934e-69
NZ_CP022058.2\|WP_185133770.1\|1844215_1845307_-\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	0.000336082
NZ_CP022058.2\|WP_088583857.1\|1824637_1826257_-\|family-10-glycosylhydrolase	gnl\|CDD\|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	1.92717e-59
NZ_CP022058.2\|WP_027373286.1\|1822523_1823615_-\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_CP022058.2\|WP_185133769.1\|1835254_1839127_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	1.27732e-61
NZ_CP022058.2\|WP_027373299.1\|1842495_1844052_-\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|349937	cd08015, M28_like, M28 Zn-peptidase-like; uncharacterized subfamily. Peptidase family M28 (also called aminopeptidase Y family), uncharacterized subfamily. The M28 family contains aminopeptidases as well as carboxypeptidases. They have co-catalytic zinc ions; each zinc ion is tetrahedrally co-ordinated, with three amino acid ligands plus activated water; one aspartate residue binds both metal ions.	7.18143e-88
NZ_CP022058.2\|WP_088583861.1\|1839278_1841402_+\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0

>NZ_CP022058.2|WP_027373293.1|1829931_1830609_-|YceI-family-protein
MKKISVIALVAVGLLAVSCNNKEKTTDTAVATEQSVAEGKGEALAVDTVTSVVNWKAFHKGGFAPRWGTLNIKSGDLNIEGGQLVAGSFTIDMTSIKVDPASVTEKDKKPADLETHLKSADFFAVDKNPVSDFKITSVADVKDAPKDAVAGANKTISGNLTLLGKTMNVSFPAKVNVTDASADIQAKFTVNRADWGIKFGTSEADPAEWMISKDIEIAIDVKAKK
>NZ_CP022058.2|WP_088583859.1|1829239_1829788_-|type-1-glutamine-amidotransferase
MSKKIAILATNGFEESELQSPKEYLEQQGWTADIVSPESGTIKAWAEKDWGKEYNVDRTLSEVKASDYDALVLPGGVLNPDKLRTDDQALSFVKDFFVQNKPVAAICHGPQILINAEVVNGRNMTSVHSISKDLMNAGAHWEDKEVVVDNGLVTSRTPKDLPAFNAKMVEEFKEGKHVEQGI
>NZ_CP022058.2|WP_088583858.1|1828798_1829155_+|hypothetical-protein
MTVHDLAGTYSIKGSNQEESNDTSYEGILLLSVDENNRVVAQWIIGDHVQHGTGFYKDQILVLNFNYEGDDQKVYKGVAVYRCLSKDILDGFWSEKHGNPLYLGSEYCRRIQNSWLFN
>NZ_CP022058.2|WP_027373290.1|1828428_1828683_-|DUF1294-domain-containing-protein
MIPFLLIINMIAFGAFGFDKWQARKHQWRISENMLLGISLFGGIIGAASGMIFFNHKISKKSFLTKFIIVTLIDLVLLYRLIRH
>NZ_CP022058.2|WP_027373289.1|1826387_1828193_-|translational-GTPase-TypA
MQNIRNIAIIAHVDHGKTTLVDKIIHATNIFRENQESGELIMDNNDLERERGITILSKNISVTYKDTKINVIDTPGHADFGGEVERVLKMADGVILLVDAFEGPMPQTRFVLQKALELGLRPLVVINKVDKPNCRPDEVHDQVFDLFFNLDATEEQLDFPTFYGSSKQGWFNTSLEQTEDILPLLDGILQYVPAPKVTEGNLQMQITSLDYSSFLGRIAIGKVTRGEIKESQWIGLAQADGKVVKGKVKELYVFEGLGKKKVTEVQAGDICAVVGFDSFQIGDSFVDLENPEPLERTAIDEPTLNMTFSINNSPFFGKDGKYVTSNHLKERLTKELEKNLALRVQQTDDANTFLVFGRGILHLSVLIETMRREGYEMTIGQPQVILREIDGVSCEPYESLVVDVPEEYASRVIDLATQRKGDLHIMETKGEMQHMEFEIPSRGLIGLRSQMLTATAGEAIMAHRFTEYKPFKGAIPGRNNGVLISKTQGPATEYSIAKLQDRGKFFVDPGEEIYAGMIIGEQNKPGDLVVNIVEAKQLNNMRASGKDKDTGVAPKILFSLEECMEYIQGDEAIEVTPNFIRMRKKLLSEEERKRVERSAKA
>NZ_CP022058.2|WP_088583857.1|1824637_1826257_-|family-10-glycosylhydrolase
MKMNKLKLIVLLGVFASYSTSCSVQNNTTKTPPVKNTTKPNNNTSQPKPPVATTKPTPVKPPTAADETFRTNLPEIKREFRGAWIASVANINWPSRNDLTVDQQKAEAIAMLDMLKNNNFNAAIFQIRPSADALYTSNIEPWSYFLTGETGTAPYPNYDPLQFWIDESHKRGLELHVWLNPYRAHHTNGGSVNSLSMANKLSDIVVRLKNGMYWFDPANPKTQGHVSNVVKDIVQRYDIDAIHFDDYFYPYATYNKGADFPDNATWNAYVSSGGNLSRADWRRDNVNKFVERIYKEIHAEKSHVKFGISPFGIWKPGYPAGIVGSSQFDELYADAKLWLNKGWVDYFSPQLYWPIDSKGQGFESLLSWWQSENTMNRHLWPGLNTVEIKVSDRPAEIKNQIEISRNILKKDAGEIHWSIAGLTKNANMLPALKNGPYSEKALIPKTPWIKAVPLQTPTLFITDNGSFAQTSWSSKNMSNVFQWVLFKQYNGIWETEILTLDTLSKDIPKFKDGKKLGALAIKAIDRLGNESDYMAKKVK
>NZ_CP022058.2|WP_034735383.1|1823794_1824346_-|ferritin
MNTKRLSANMEKALSDQMNKEIHASHVFLSYGIWADDKGYQGIANFLYRHAQEERNHSIKFMEYILNRGGKPKVDAIPAPPADPESLTACFDGVFKHEVDNTTAIYKIVDLSMEEKDWATWNFMQWFVQEQIEEETLAQNLIDKLKIAGGDRATDESLFTLDKTLQEAPNDVPLAQNATGDNP
>NZ_CP022058.2|WP_027373286.1|1822523_1823615_-|redox-regulated-ATPase-YchF
MKCGIVGLPNVGKSTLFNCLSNAKAQSANYPFCTIEPNLGTVSVPDQRLFELEKIVKPERVLPAVVEIVDIAGLVKGASKGEGLGNQFLANIRECEAIIHVLRCFDNGNIVHVEGSVDPLRDKEIIDIELQLKDLETVGKAVEKAKKFIKSGKKEDILAYETLQSLQKFLEDGKNAREFAVNDLTQSIIGEVQLLTNKPVLYVCNVDENSIKNGNDWIGKIEEMAKNEGAEVVVLAAQIEADINELETFEEREIFLDELGLTEPGVNRLIRKAYDLLKLQTYFTAGVKEVRAWTIGQGWTAPQAAGVIHTDFEKGFIRAEVIKYNDYVTYGSEVKVKEAGKLSVEGKEYIVQDGDIMHFRFNV
>NZ_CP022058.2|WP_164464837.1|1822174_1822333_+|hypothetical-protein
MKKQNLHQGKKLNKTQLKAISGGVMRCTHIGGGCAQIHLSCYKNNVVRKQMK
>NZ_CP022058.2|WP_164464836.1|1821948_1822110_+|hypothetical-protein
MKNQTLNKGKKLNKKELRVIAGGKEMCWLAERVCSKISFSCAEPQCQPSIEIE
>NZ_CP022058.2|WP_034678328.1|1834020_1834359_-|CRISPR-associated-endonuclease-Cas2
MNAERFNAYRIMWVLVLYDLPTETKANMKDANRFRKSLLDDGFTLFQFSMYVRHCPSRENAEVHIKRVKFMLPKAGKVAIMCITDKQFGDIEIFFARNKEEPPPTFQQLELF
>NZ_CP022058.2|WP_034735329.1|1834355_1835249_-|type-II-CRISPR-associated-endonuclease-Cas1
MITRSIYIGNPAHLKLKDEQMYILEPSTKEMKGKVPVEDLGLLMLDHFQITISHQLIQKMMGNNVVVVSCDGHHLPHGIMLPLYGHTEHSDRIKDQLEASEPLKKQLWKQTVECKIENQKEVLKRLGNFYEPMSDYQNNVKSGDITNMEGIAAQHYWKHLISLDFLRQRFGDSPNQFFNFGYSVLRSIVARAIVETGLLPVLGIFHKNKYNPYCLADDLMEPYRPFVDLLVMQWLAGNSETEELTKEFKAFILQIATKDVKIDDKIRPLLIAVKTTAMSLYKCYTGEKRLISYPKLI
>NZ_CP022058.2|WP_185133769.1|1835254_1839127_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MGIRNSDIFFISNFMWYQKLIMMIKNILGLDLGTNSIGWALIEVDENNIPIRIIAMGSRIIPLSTSDKEEFQRGLSITKNQNRTVSRTQRKGYDRKQLRRSDLKKILKKYNIFPSEELLKLPMLDLWKLRSDSANPNEDISAEQLGRILYMLNQKRGYKSARSEANSDKKDTDYVQAVKGRYAQLKDRRQTIGQYFYEELSTAFSDKNNQQYFRVKEEVYPREAYIEEFDTIINAQKDKHDFLRDKVIHQLRNEIIYFQRKLKSQKGLVSICELEGFEKTVYDKEKNKNKVVFVGPKVAPKTSPLFQLCRIWEVVNTISLKIKNPEGSKYKWGEKVPNLKQKEILADYLFKNENLSFSTLLEILELKKEDVYVNKQILKGIKGNEAYAALHNVLGDHELLNFDVSIITSDHTAILVDKKTGEILEERAGLELDASLEREPLYQFWHTIYSLKDLDECKNALIKRFGLDEDIAEKLSHIDFNKQAFGSKSNKSMRKILPFLMEGYNYSESCSLAGYNHSNSLTKDERESQITLERLELLPKNNLRQPIVEKILNQMINVVNTILEKYGKPSEIRVELARELKQSKDERNDTDLQNSRNKKLNEEIGKRLAELGLPVTKRYIQKYKFIFPSLSKNLKDAHVNNQCIYCGETFNLTEALNGDAYDVDHIVPKALLFDDSQTNKVLVHRKCNSTKTNQTAYDYITAKGEEEVRIYSERVDDWFKKGIISYSKMQRLKVSHKEYLERKKLGKETETDKKLWENFIDRQLRDTQYISRKSREILQKVCNNVTTTEGGVTAKLRNLWGWDDILMNLQMPKYKELGQTITKEWTSEHGKRKHQKEEIENWTKRDDHRHHAIDALVVACTKQGFIQRINTLNSSETKDLMIKEVEEAKIEFNEKTTLLEKYLKTQKPFTTREVMKEADKILISFKAGKKVATITKFKATGKNKETGVIVPRGALHEQSVYGKIKVIEKDKPLKYLFENPDKIVNSRIRDLVETRLSENENNSKKALSTVKKNPIFFNEEKNEILEKTSCYNDATVLKYKLQNLKANQVDDIVDERVKFLVKERLTQFGSKEKEAFKDILWFNQEKQIPIITVRLFARPDANNLQIIKKDKNGKDIGFVLTGNNHHIAIYEDKDSKLVQHSCTFWHAVERKKYNIPAVIKNSADVWSLLLDKELPVLFLEKLPADELNLKFSMQQNEMFILGLSQEGFDEALKNNDKSLLSKHLYLVWSISNNDYYFRHHLETKNTELKNIPTAKDSKRYFRFKSVGALVGINPIKVRLNHLGEITKIGE
>NZ_CP022058.2|WP_088583861.1|1839278_1841402_+|RNA-binding-transcriptional-accessory-protein
MTTVEFIQKQLNISEKSINNTLQLLAEDCTIPFISRYRKDKTGNLDETQIEQISKISKQFEEIVKRKESILKSIDEQKALTPELRQRIQESFDIQELEDLYLPFKKRKKTKADAAKEKGLEPLARIIMSQKNNDLLFLASKYLNQDVSSEEEALQGARDIMAEWINENMYVRKNLRRIFQRKAVITSKVVKAKKEDDDAQKFSQYFEWEENLSRTPSHRLLAMLRAESEGFVKTNVEIDKEEAIDFIEKAIIKSNNESSEQIALAIKDSYKRLLEPAISNEALQEAKEKADQKAIEIFSENLGQLLLAPPLGEKRILAIDPGYRSGCKVVCLDEKGDLLHNETLYPHAPQNESGMAMKKIRSMVNAYNIEAISIGNGTASRETEFFIKKIAFDKPLQVFVVSEAGASVYSASKIARDEFPSYDVTVRGAVSIGRRLSDPLAELVKIDPKSIGVGQYQHDVDQTLLKNELDSTVMKCVNSVGINLNTASKSLLSYVSGIGEKMAENIVNYRAENGAFEDRKQLKKVPRLGEKAFQQAAAFVRISNAKNPLDNSAVHPEAYGIVEKMAKNLGIKTDELIANKEKIAQIKAENYITEEIGILGIKDILKELEKPGLDPRKAAKVFEFDPNVKSIKDLKAGMILPGIVNNITAFGCFVDLGIKESGLVHISQLKDGFVSDVNEVVKLHQHVRVKVTEVDEARKRVQLSMIL
>NZ_CP022058.2|WP_172957723.1|1841448_1842084_+|HAD-hydrolase-like-protein
MKYKNLIFDLDGTLWDPRLTIISIWNDVLQRHQLIQKDLKPEDMDPYMGLLAKDIVKDMIPGISDAEVQEILSQIVAQENKILRVKGGTLYSGVENTLKKLSETYKLFIVSNCQDGYIESFLEHYQFNEVFVDFESHGRTQKKKAENIKLIMERNHLLPENSVYIGDTQTDHDSAAANDLPFIFCRYGFGKLDNEGYTPSISKFPDLETCI
>NZ_CP022058.2|WP_027373299.1|1842495_1844052_-|M20/M25/M40-family-metallo-hydrolase
MKINRFFAVPAVVLAAQFSWAQVKVDPSEKLDPVVKSFVDEINNNSQLENMAYELLDGVGPRLVGTPEMLAANEWSAEKLRSWGVEANLQQFGTWKGWQRGTTHVDMVYPRVKSLTATQLAWSPATKKAIEGEVVILPKVSTKAEFDKWLPSVKGKIVLMAQYQKVGRSDEQIKEFATPELYEKLKAEKEQATKDFAAYVKNIGYDNNSLPEALEKAGAAGIAISNWTGIMGANRIFGAKTSKIPMVDIDVEDYGMLYRMAEKGAQPKIKIDAQSKILPDAKSFNTIGMIKGKEKPDEYVILSAHLDSWDGAQGATDNGTGTLTMLEAMRLLKKYYPNNKRTIVIGLWGSEEQGLNGSRGFVADNPQIIKGVQAAFNQDNGTGRVVNISGQGFVKAYDYIGKWLEGVPKTVRGHIKTDFPGMPGGGGSDHASFVAAGVPGFSLGSLNWGYFGYTWHTTKDTYDKIIFDEVKNNVVLTAALAYMASEDPEFTNREKRTMPKDEKWPEAKEPRRSSKEYK
>NZ_CP022058.2|WP_185133770.1|1844215_1845307_-|carboxypeptidase-regulatory-like-domain-containing-protein
MDAENNKPISNARVLLQHQLVYTNEDGYVAVEPGSANFEISASGFQKVKIREFHSPVQLKRVYKNIDEVKMVKVDLEKLLQDVHNNYKKRYYNEPSLYDVLYKEKRSDNNQLHLLVIAEAKLWNRTNFYDRNESFDKNLQMQLNNVKYFKNLKSDSIFTQKIKRFSDEYMGNYFFNFELSRTLAHVKNKGSKSSAWMFFKEGDEQFITFKIKSGLGIDLAGEMKYHEADKVITYFEIHYLQDQYPMVKRRTGEGEEFDYQMGNAILVFDFYKNGGVYVPAMSSLEGNKYVAYYKGVKHERKISRELIYTTFKRSDTKGLNPKVDFTKDIWDNVSVSENKNNTVLLSVEEQAFISRPSPDFRPK
>NZ_CP022058.2|WP_027373301.1|1845559_1845736_-|histone-H1
MKELIEKINAEFEAFTTEANQQAEKGNKAAGTRARKSALELSKLFKEFRKVSVEEAKK
>NZ_CP022058.2|WP_088585039.1|1845982_1847401_-|PLP-dependent-aminotransferase-family-protein
MKPYKYEIFTKSIEEQIRNGLLQPGDRLPSVREIKERYQLSTSSVQSGFEYLMITGLAESLLRSGYFVPQRKEENIPEARTMLPVVVRDEVFMKNMLLTSRRTSEPASFNTTMPGDLLVPQKLILRTMQEVIRKKGAALLRYYPSDGSGALRKQISKQMRMHGCLLNPDEIIITDGALQALTIALRSVTKAGDVVAVDSPCVFSVLEVIANLGLKVIEIPVHYRTGFDTDYFRKACSEHNIKALAVTPNFHNPTGILMKDETKKEIVNIAETHEVCIIENDMYSDLYFEGKRPSCIKSFDTSGIVMMYSSFSKTLAPGIRLGWLYAGNFYSKSERARFILGRSVSPVYQELILSLLEKNSYERHLRSFRKKLNHQAVVVLDCLRKFFPEEAYFHRPQGGYNIWGQLPEKTDMKKFYHYCENNSIMFTPGNTFSPTNRYSHHFRVVFAERITPENLFLLENAGKKVKEFFTHK
>NZ_CP022058.2|WP_027373303.1|1847519_1848032_+|hypothetical-protein
MDIISKFTVGSEEGISDLITILDSSVYALHKDFVSEEDIKKYKNGIDPRKMINDLNDLSNQLIMTYADQQPVGYSIIKSGSVYPGIQEGKRSTEISFVILPGFDSPETRDSLWKKCRSAVSFTDVLWINMLSHDPLLEFLKEMGFTAVSDSQAGPFQLPSHILIMDLNKG

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Crispr_ID: NZ_CP022058_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022058_2

4591103-4591232

Orphan

Consensus_repeat	Method
TGAAAACAACGGTTGTCCTTGGCCAGATACAGACGGTGACGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022058_2

>merge|NZ_CP022058|2|4591103-4591232|CRISPRCasFinder
TGAAAACAACGGTTGTCCTTGGCCAGATACAGACGGTGACGGTGTTATCGATAAAGATGATGCTTGTCCTACAGTAGCAGGTCCTGCTGAAAACAACGGTTGTCCTTGGCCAGATACAGACGGTGACGGT

>NZ_CP022058|2|2|4591103-4591232|CRISPRCasFinder
TGAAAACAACGGTTGTCCTTGGCCAGATACAGACGGTGACGGT	GTTATCGATAAAGATGATGCTTGTCCTACAGTAGCAGGTCCTGC
TGAAAACAACGGTTGTCCTTGGCCAGATACAGACGGTGACGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022058.2\|WP_027371684.1\|4591872_4592613_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NZ_CP022058.2\|WP_027371681.1\|4594541_4594832_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379642
NZ_CP022058.2\|WP_051584819.1\|4599653_4600685_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP022058.2\|WP_034734853.1\|4596669_4597632_+\|DUF4013-domain-containing-protein	unknown	unknown	unknown
NZ_CP022058.2\|WP_027371686.1\|4589733_4590192_+\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|376590
NZ_CP022058.2\|WP_027371680.1\|4594924_4595674_-\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP022058.2\|WP_027371689.1\|4585272_4586985_-\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
NZ_CP022058.2\|WP_088584808.1\|4576686_4578441_+\|discoidin-domain-containing-protein	unknown	unknown	gnl\|CDD\|350096
NZ_CP022058.2\|WP_061084873.1\|4579423_4581676_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|379720
NZ_CP022058.2\|WP_027371690.1\|4584641_4585226_-\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NZ_CP022058.2\|WP_034734843.1\|4587989_4589612_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|237894
NZ_CP022058.2\|WP_027371682.1\|4593581_4594553_+\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|273203
NZ_CP022058.2\|WP_088584810.1\|4581721_4583983_-\|TonB-dependent-receptor-family-protein	unknown	unknown	gnl\|CDD\|379720
NZ_CP022058.2\|WP_027371691.1\|4584227_4584566_-\|DUF3817-domain-containing-protein	unknown	unknown	gnl\|CDD\|378962
NZ_CP022058.2\|WP_027371676.1\|4598427_4599585_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022058.2\|WP_027371683.1\|4592756_4593581_+\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|277343
NZ_CP022058.2\|WP_061084661.1\|4597624_4598416_+\|DUF4129-domain-containing-protein	unknown	unknown	gnl\|CDD\|379261
NZ_CP022058.2\|WP_027371688.1\|4587093_4587906_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320693
NZ_CP022058.2\|WP_088584809.1\|4578480_4579341_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP022058.2\|WP_088584811.1\|4595702_4596686_+\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|376676

Protein	Function_ID	Function_description	E-value
NZ_CP022058.2\|WP_027371684.1\|4591872_4592613_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	1.71933e-110
NZ_CP022058.2\|WP_027371681.1\|4594541_4594832_-\|N-acetyltransferase	gnl\|CDD\|379642	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase. This family of GCN5-related N-acetyl-transferases bind both CoA and acetyl-CoA. They are characterized by highly conserved glycine, a cysteine residue in the acetyl-CoA binding site near the acetyl group, their small size compared with other GNATs and a lack of of an obvious substrate-binding site. It is proposed that they transfer an acetyl group from acetyl-CoA to one or more unidentified aliphatic amines via an acetyl (cysteine) enzyme intermediate. The substrate might be another macromolecule.	4.38171e-15
NZ_CP022058.2\|WP_051584819.1\|4599653_4600685_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	2.52291e-99
NZ_CP022058.2\|WP_027371686.1\|4589733_4590192_+\|SsrA-binding-protein-SmpB	gnl\|CDD\|376590	pfam01668, SmpB, SmpB protein.	5.94561e-72
NZ_CP022058.2\|WP_027371680.1\|4594924_4595674_-\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	3.16284e-19
NZ_CP022058.2\|WP_027371689.1\|4585272_4586985_-\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	2.06195e-165
NZ_CP022058.2\|WP_088584808.1\|4576686_4578441_+\|discoidin-domain-containing-protein	gnl\|CDD\|350096	cd08982, GH43-like, Glycosyl hydrolase family 43 protein; uncharacterized. This glycosyl hydrolase family 43 (GH43)-like subfamily includes uncharacterized enzymes similar to those with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	7.52362e-148
NZ_CP022058.2\|WP_061084873.1\|4579423_4581676_-\|TonB-dependent-receptor	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	1.13898e-62
NZ_CP022058.2\|WP_027371690.1\|4584641_4585226_-\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	3.53199e-78
NZ_CP022058.2\|WP_034734843.1\|4587989_4589612_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
NZ_CP022058.2\|WP_027371682.1\|4593581_4594553_+\|glycosyl-transferase	gnl\|CDD\|273203	TIGR00661, conserved_hypothetical_protein, conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. [Hypothetical proteins, Conserved].	1.10422e-44
NZ_CP022058.2\|WP_088584810.1\|4581721_4583983_-\|TonB-dependent-receptor-family-protein	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	1.04612e-61
NZ_CP022058.2\|WP_027371691.1\|4584227_4584566_-\|DUF3817-domain-containing-protein	gnl\|CDD\|378962	pfam12823, DUF3817, Domain of unknown function (DUF3817). This domain is of unknown function. It is sometimes found adjacent to pfam07690 and pfam03176 which are both transporter domains.	2.96609e-21
NZ_CP022058.2\|WP_027371683.1\|4592756_4593581_+\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|277343	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	7.48564e-54
NZ_CP022058.2\|WP_061084661.1\|4597624_4598416_+\|DUF4129-domain-containing-protein	gnl\|CDD\|379261	pfam13559, DUF4129, Domain of unknown function (DUF4129). This presumed domain is found at the C-terminus of proteins that contain a transglutaminase core domain. The function of this domain is unknown. The domain has a conserved TXXE motif.	0.000196619
NZ_CP022058.2\|WP_027371688.1\|4587093_4587906_+\|M48-family-metalloprotease	gnl\|CDD\|320693	cd07334, M48C_loiP_like, Peptidase M48C Ste24p loiP-like, integral membrane protein. This subfamily contains peptidase M48 Ste24p protease loiP (formerly yggG)-like family are mostly uncharacterized proteins that include E. coli loiP and ycaLG, considered to be putative metallopeptidases, containing a zinc-binding motif, HEXXH, and a COOH-terminal ER retrieval signal (KKXX). They proteolytically remove the C-terminal three residues of farnesylated proteins. They are integral membrane proteins associated with the endoplasmic reticulum and golgi, binding one zinc ion per subunit. In eukaryotes, Ste24p is required for the first NH2-terminal proteolytic processing event within the a-factor precursor, which takes place after COOH-terminal CAAX modification (C is cysteine; A is usually aliphatic; X is one of several amino acids) is complete. Mutation studies have shown that the HEXXH protease motif, which is extracellular but adjacent to a transmembrane domain and therefore close to the membrane surface, is critical for Ste24p activity. LoiP has been shown to be a metallopeptidase that cleaves its targets preferentially between Phe-Phe residues. It is upregulated when bacteria are subjected to media of low osmolarity, thus yggG was named LoiP (low osmolarity induced protease). Proper membrane localization of LoiP may depend on YfgC, another putative metalloprotease in this subfamily.	1.11248e-107
NZ_CP022058.2\|WP_088584809.1\|4578480_4579341_-\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	7.08078e-21
NZ_CP022058.2\|WP_088584811.1\|4595702_4596686_+\|stage-II-sporulation-protein-M	gnl\|CDD\|376676	pfam01944, SpoIIM, Stage II sporulation protein M. SpoIIM is on e of four stage II sporulation proteins that is necessary for the forespore inside the mother-cell to be properly internalized through the breakdown of peptidoglycans trapped between the membranes of the septum separating the forespore and the mother-cell. The four proteins working in sequence are SpoIIB, pfam05036, SpoIIM, SpoIIP, pfam07454, and finally SpoIID, pfam08486. D, M and P are in a complex with each other and the complex assembles in a hierarchical manner such that M, which serves as a membrane anchor, recruits P to the septum and P, in turn, recruits D to the septum.	3.11431e-24

>NZ_CP022058.2|WP_027371686.1|4589733_4590192_+|SsrA-binding-protein-SmpB
MKIEKTVNILNRRARFEYEILEEYEAGMVLTGTEIKSLRSSKASITESFCQFIDGELYIINMMIDEYKLGTFYNHKTKRERKLLLHKKELTKLEKKLKDAGNTIIPLKLYITDRGKAKVLIALGRGKKLYDKREAIKDRENKRNLDRILKKS
>NZ_CP022058.2|WP_034734843.1|4587989_4589612_-|ATP-binding-cassette-domain-containing-protein
MLTVSNLSLQFGKRVLFDEVNIMFTKGNCYGIIGANGAGKSTFLKILTGKQDPTTGHVSLEPGKRMSVLEQDHFAYDQYTVLEAVLRGNKKLFEIKEEMDALYAKEDFSDEDGIKAGELGVIYDEMGGWTAESDAQTMLSNVGITDDMHWQMMSELENKDKVKVLLAQALFGNPDVLILDEPTNDLDIDTISWLEDFLADYENTVIVVSHDRHFLDTVCTHIGDLDYSKLNLYTGNYSFWYQASQLATRQRAQANKKAEEKKKELQDFIARFSSNVAKAKQATARKKMIDKLNIDDIKPSSRRYPAIIFEMEREAGDQILDVKGLEKTKDGELLFSNIDLNLKKGDKVAVLSKNSLAITEFFEILAGNVEPDKGTVAWGVTTNQSHMPLDNTNFFQEDLSLVDWLRQFTKNDEERHEEFVRGFLGRMLFSGDEALKSCKVLSGGEKMRCMFSRMMLQKANVLLLDEPTNHLDLESITTLNNSLSNFKGNLLLASHDHEMLSTVCNRIIELTPTGIIDREMTYDEYLADKKVKELREKMYS
>NZ_CP022058.2|WP_027371688.1|4587093_4587906_+|M48-family-metalloprotease
MKKMTVCLLFLGAMHTINAQKINLGKAAGIVSNGAKALTFTNEDAIKLSKESVEWMDKNNPVAGAKDPYTVRLNKLFGKHKSQDGLNLNYKVYKVKDINAFACADGSVRVFSSLMDIMTDSELLAVIGHEIGHVKNQDTKDAMKSAYLKAAALDAASSASGAVAALNESQIGKMANAFLDASHSKKQESEADTYSYDFMKTNKYDVVGAYTAFKKLALLSEGSTQTNFEKMFNSHPDSEKRALAIKKKAEKDGLWKDPGTVSLPTSKLTK
>NZ_CP022058.2|WP_027371689.1|4585272_4586985_-|single-stranded-DNA-specific-exonuclease-RecJ
MSQKWIYKPEPDEEVVDRLSSSLGFGTFESKLLVLRGIDNYQKAREFFKPNLNDIHNPFLMADMQKAVERIATAIENGEKILVYGDYDVDGTTAVALMYLYLSKIVEKKYLDYYIPDRNSEGYGISTEGIDFAKENGFSLIIALDCGIKALDMISYASGLGIDFIICDHHLPGEEIPNAAAVLDPKRTDCRYPFKELSGCGVGFKLCQGLNTIYKIPEAELFELTDLLAISIAADIVSMTGENRVLAKMGLKILRKTRNMGLRLLIPEDKLSHFEISNIVFEIAPKINAAGRISHGKAAVELMVSDNLKHANQIVNDIMNLNDERRELDMNSTLSALNQIIESQQETKHTTIVYHPEWNKGVIGIVASRLIETYYKPTLVFTDGNNGEMVASARSVSDFDVHEALDMCSEYFLKFGGHHAAAGLSMEKDKFAAFKEKFERIVSEKIQEHQKEPSISIDTEIKIDEINREFINFHRKLAPFGPHNMKPIFTLTNQKLSGYVKTMGKDNNHLKFYIKQESTGRNIECVGFKLGQFVDDFKTKSFDLAFTLEENHWKGNVTHYLNIKDVKFRE
>NZ_CP022058.2|WP_027371690.1|4584641_4585226_-|nicotinate-nucleotide-adenylyltransferase
MKKIGLFFGSFNPIHIGHLILANYILENSDMDELWFVVSPQNPFKDKKSLLNDHNRLDMVQLAVKNYPNMRASNVEFSLPKPSYTIDTLTYLHEKYPEYSFSLIMGEDNLDSLHKWKNADILIKNHHIIVYPRVFDGAKKDSEYLRHDNISLVKAPIIELSATEIRNMIKEGKNVRPMLPPEVFEYLDGSSFYK
>NZ_CP022058.2|WP_027371691.1|4584227_4584566_-|DUF3817-domain-containing-protein
MNFIEKFFNKYSQDKIIKWFKQICLAEAISCILLYCVAMIWIRYDENLYSIIFISVVGSLHGLFFTLYLLLCLPARKIYNWDDEDFVFALLAAFFPFATVWVDKKLAQFDRE
>NZ_CP022058.2|WP_088584810.1|4581721_4583983_-|TonB-dependent-receptor-family-protein
MKTQILIAALFFGGLITAQQKKDSLKVNAIDAVNIKKQVFKKQGDRLIYDVASSPIAKGTNTFNLLKQTPMISSIDGKTLKILGKSDAIIYINNKKTNMDSEALIEMLKSTPSEDIQKIEVITVPGSEFQVESKEGVINIIMKKNKNNGYNGTLKMQNEQAYYNNPNAGASFNFRQGKWSGNSNFRTGSWTERQKYSLSNGDSTFRNESYGFNDDPNKNFSGGFNIDYEINKRQSLGFSYNMRYNKSFNSVLDITNWQNGVLKNRTVNNEDAQTRNHSFNLNYELKTDSLGSKLTSNVSYLWFNRDKVSFNESFPLTNDTINKYGALHQSVPQIINNYAANIDYLKKTAKGATWLMGISYNRTNTDNDTRQDKLLKGEFVIDPNQTNHFIYKENILGIYLNYERKLTEKLSGKIGARYEMTRSTGDIVDKTGFERNYNNLLPYLNLNYTINSDHNLSYTFSSRIRRPRFWELNPSRTYFTPTNYTQNNPFILAFKYYNQELNYMYKNAFYANLSFNMVEDAAASDMLPLQGTVTAPQKDDDGKIIYDIKGNPIMQTTRFLRYIRTNYGKSRELSLTLGMNKSWFKDIWTTNYSVNLSYVTYKGAVLNDPTSMPAPGEIEVVDPYIIDIKNYNMSATINNIVRLSSKKDWFLGVNYFFSSKAATEAGTVGVRQSFDLNLKKIAGDWTIMAEVSDLFNQSYYRVNGIQPDGKYNNITNFSYPRLISIGVTYNFGNQKLKKAREMKSANDAVKSRT
>NZ_CP022058.2|WP_061084873.1|4579423_4581676_-|TonB-dependent-receptor
MKRILLSMAVIFGTFALAQEKKSDTAKTKNIEGITLTKQVFKKQSDRFVYDVAASPVAKGNTTFDLLKQTPLLSSTDDKTLKIAGKNNALIYINGRKTNMDAESLVQFLKNTPAENIQKIEVITVPGSEYQVESSDGIINIVLKKKMSDGLNGNMRFSNTQSKYNASQASFSANYRKDKLAISANLNGGENIQAQRYVLRNGTADTSNESVGDIDDPNKNIGGYLNIDYQLTDKSNLALSWNTWANKSYNSTVSLFNTIKNGNNTVYTWSKNKEDARTYNNSLNLNYELKTDSLGSKLNVNAAYLNYKRFQFTDNRTYASNSNGDIKDMTTQVFQDLPQIINNFSGMVDYIQKFKNDLTISVGGNYNRTKTDNDSKNITYFYDPAKNPDPKPNHFIYDENIYGLYVTAEKKFSDKFSGKIGARYEITNSLGTSDNAATEDLKRIERNYNNFLPYLSFNYAINEKNNISYSFSSRMRRPSFWEINPVKNILTDYNYTQNNPFVKASSTYNQELTYMYKNSYFLILNHSYFKDAITQVPLQGYPVSPDGTVGSNPVLRYIRTNFGDRQEMSAMFGIQKSFFKQYWTTNFNIGLQHNINNGSLDTDPTTGDRFKNKDGQFIVYTNNIKSTSLLIQTNNTIRLDKKKTWFLGINYFYIDKQQIELGQLKSLMSLDLSIKKTWNDWTFAVNLNDILRTNIVKIEDYQANGNYNYVHQNQYPRNIMISLTYNFGNQKVKKVRDIEGASDSIKSRTR
>NZ_CP022058.2|WP_088584809.1|4578480_4579341_-|alpha/beta-hydrolase
MKKRLIGTLLLTTLFLLLINCKDKKISFDNKVGFDKEENISYGPHSGQTMDLYIPHKKITENTKAFIMIHGGGWRAGNKSQLTFFALSLMKQFPGHIFVNMNYRLASETEYALPNQTDDIGHVVSFLENKLHYSPQLILLGNSAGGHLSMLYAYKCDLLKKVKAVINIVGPADLSDSGFKNYQEYFFVERQLVDPHFPKAGISDIEVASPVYWITKESPPTLSYYGKNDRVIPSGQGKILDSVLSRNNVLHEFYEFNGGHLDWDKSPNDVVLIDGIKSFLQKADNK
>NZ_CP022058.2|WP_088584808.1|4576686_4578441_+|discoidin-domain-containing-protein
MRQYFLSIAIFLGIVIGAQQKTFCNPINIDYGYTPFEAFSKQGKHRATADPVIVNFKNKLFLFSTNQEGYWYSDDMLDWKFVKRKFLRDNKYIHDLNAPAVWAMKDTLYVFGSTWEQDFPIWKSTNPTKDDWKIAVDTLKVGAWDPAFHYDEDKNKLYLYWGSSNEWPLLGTEVKVKTLQSEGFVKPILRLKPEDHGWERFGEYNDNVFLQPFVEGAWMTKHNGKYYMQYGAPATEFSGYSDGVYVSKSPLEGFEYQQHNPFSYKPGGFARGAGHGATFEDNFKNWWHISTIFISTKNNFERRLGIWPAGFDKDDVMYCNTAYGDYPTYLPQYAQGKDFSKGLFAGWMLLNYNKPVQVSSTLGSYQPNFAVDEDIKTYWSAKTGNTGEWFQTDLGETSTINAIQINYADQDAEFMGKTSGKMHQYKIYGSDDGKKWKVLVDKSKNTKDVPHDYIELEKPASARFLKMENLKMPTGKFALSGFRVFGKGAGEQPKKVEGFVPLRADPKKYGERRSIWMKWQQNTEADGYVIYWGKSPDKLYGSIMVYGKNEYFFTGADRADAYYFQIEAFNANGMSERTEVFRSE
>NZ_CP022058.2|WP_027371684.1|4591872_4592613_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRAFEYRKASKMARWDKMAKTFSKIGKDIALAVKAGGADPESNPALRRCIQNAKGANMPKDNVERAIKKASGADAENYEEVTYEGYGQGGVAFFVECTTNNTTRTVANVRAVFNKFDGNLGKNGELAFIFDRKGIFTIDLAQIKMDWDDFEMEMIDGGAEDVEKDEEEVMITTAFEDFGSLSHKLDELGIEAKSAELQRIPNNTKEVTEDQFKANMKMLERFEDDDDVQNVYHNMEITEELMNSL
>NZ_CP022058.2|WP_027371683.1|4592756_4593581_+|UDP-2,3-diacylglucosamine-diphosphatase
MKRNVELVVISDVHLGTYGCKAKELLRYLNSIQPKTLVLNGDIIDIWQFKKSYFPKPHLKIIRKILSFATKDTEVYYITGNHDEMFRKFTDFELGKLKVCNKICLTIDDKKTWIFHGDVFDASVQHSKWIAKLGGKGYDLLIIINNVVNWFLEKMGKEKYSFSKKIKNNVKKAVKYIGDFELTASELAIDNHYDYVICGHIHQPQMREVVTKKGSCTYLNSGDWIENLSALEYNDKQWRIFYYDEYKHLLTDDGAEDIQEMDNSDLLKIVTNFT
>NZ_CP022058.2|WP_027371682.1|4593581_4594553_+|glycosyl-transferase
MKILYAFQGTGNGHMARAQEIIPILKKYASVDTLISGHQSQLKADFGINFQYKGISLLYNKTGGLSYRKTFTENKFFDALKTIRNLELSGYDLIINDYEPLTGWASKMKGLPMIELSHQASMSFPETPKPGKKDFLGEMILKYYVPSERKIGFHFENYHPQIKKPVIRKKIRDLNPQKQGYYLVYLPSFADENIIKVLRKIPVQWKVFSKYSTVRVKVKNVEVFPIDEIQYLKYFEGCEGILCNAGFETPAEALFMDKKLFVIPIHNQYEQECNACALDKMGIPNSKVLKLQEIMEWVASDQHLKVDYPNDIEDILLNEVLIL
>NZ_CP022058.2|WP_027371681.1|4594541_4594832_-|N-acetyltransferase
MKFENNKSGNGGVLTLNNEIKEVGRLTYTIFPEDHKLIISFVLVHPEFEGRGMGKFLVEEAIRFARENSWKVYPHCSYARSVMMRMNDVDDIFLKN
>NZ_CP022058.2|WP_027371680.1|4594924_4595674_-|RDD-family-protein
MAQIAINTSQNVNISFNIAGVGERMLAFIIDLLIRVAYVIIILYVFFNIFDLGYLLNGLDQWSVMAVYIILTFPVYIYPVVLESLMEGQTPGKKLMKIRVVKIDGYQASFGDYMIRWVFRIVDVSFAGIVGLISMIVSKNNQRLGDIASGTAVISLKNNINISHTILEHIKEDYIPSFPQVIALSDNDMRIIKDNYTKALKVDDRQIISRLSDKIKGILKLEIDPTKMTERQFINVIIKDYNYYTGKDN
>NZ_CP022058.2|WP_088584811.1|4595702_4596686_+|stage-II-sporulation-protein-M
MREIYFIKQNKEKWLGIEQVIDGKIKKNPDDLSSLYINLINDLSFAQTYYPKSNTTVYLNHLSSQIFQKIYKTKRVEENRLIYFFKTEVPLLVYQYRRYLMYAFLFFILFTSIGVLSGIYDKDFAKVILGEDYVNQTIENIKSNNAVGIYQSGTTWGSTIGIIFNNIQVGAKLYIYGIAGGVGTLFALLSNSVMLGSFQYFFYDYGALKDSARGIWLHGVFEIFAMVVEAMCGLILGASILFPRTFSRFNSFKKGFQDSFKIFLSTVPFTICAGIIEGYITRHALKMPLVLNFAIIITSLVIIGFYYFIYPAIVNKKTNKHVNDTIL
>NZ_CP022058.2|WP_034734853.1|4596669_4597632_+|DUF4013-domain-containing-protein
MIQFYKKRDFGTFISDSFNFFKLYGKNYFKNYILINGLLLILAAVVVIFGFREIFGQLLGPNMSGETYYFEKYFSENTGMLVVVSVLMFILLMLIAIINYLYPVFYLKRIAHGAEKVKTDEILDDFKKNSGRIGKLCLGMIFIVAPLVLFVVGFSYLLVLIIIGFFLILLLYPTIFNCTTFLMYDYFNSSRGFLESLSYSIRSQFSYTNGSEKSPFWKYWASSFVMFIIIYIATTIFTLVPMIFFYGSILTSTPDASFEENPFTGAMGIAMFIFYGISMILSFFLSNLMYVNAGIMYYDSRTDLHQKAELAEIDTIGINE
>NZ_CP022058.2|WP_061084661.1|4597624_4598416_+|DUF4129-domain-containing-protein
MNKILFSIVFLFFLGFIRAQNDSPVDDHLIDSLYATVHYKNMLPADSVLKANPVSENTVYPKTFKKNVPSRYKGNEFDYSESKPRESFWAKLVRKIKNIFRGIFGETVFTKSAQFTTTLVRLFAIILVGFLLYFVIRYVLGKDGNFIFGKKNRKLNLNVEELHENIHEINFPESIAKFEHEKDYRSAVRYQFLFILKKLSDKKLIIWNPEKTNKDYVAEVKAPHLKKEFSDLSHIFEYVWYGEFDITEQNYQKFKNQFQTFTP
>NZ_CP022058.2|WP_027371676.1|4598427_4599585_+|hypothetical-protein
MNKTFKIYAVIFIIVMIILALLEVNKKETTDWRRNFDRSEKSPFGLFVFSNEAQDLFKGKLKKVEQAPYEYYQQYKKEPHNIIVIENDIDRESWKKILDEVSKGSDAMLMVSRMPKQISDTIGYYDSEISFEEENVLKLTDKKYQNDFVKLDKFPSGRGFSFIRPGVVVLGKTIENKNADQANFIKVKFGKGYIYAHSEPLFLTNYYLLKPGNTKYAQDVFSYLQDRETLWFVENNSKESRFFMRFILGNPALKYAWWVFLGGLVLFIFFNAKRKQRIVPVLEPLRNTSVDFVKSIGNLYLQEGDFHDMMAKKAQYFLNKVRIDLLIDTQDLDADFAKKLQLKTGKPMEIIHEAISLIKKAQDPYANVMKEDLARINKLLDEILK
>NZ_CP022058.2|WP_051584819.1|4599653_4600685_+|MoxR-family-ATPase
MENPDHPNIENESSVNLNKQEEQFQSRIDMIELRASLDKVKSEIGKVIVGQESMIEHLLAALLSNGHVLIEGVPGVAKTITAKLLAKTVDVGFSRIQFTPDLMPSDILGTSVFSMKNSEFEFKKGPIFSNFILIDEINRSPAKTQAALFEVMEERQITMDGTRYIMEEPFLVVATQNPIEHEGTYRLPEAQLDRFLFKINVGYPNLEQEIAIIKNQHESKKEDKTEGVGKVITAEQLKSYQHLVKEVIVEGQLMEYIAKIIINTRENQFLYLGASPRASLALLTASKAFAALRGRDFVTPEDIKEASYAVLRHRVIVSPEREMEGLTADEIIRQILEGIEIPR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP022058_1	1.15\|1831884\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831884-1831913	30	NZ_CP022058.2	3695799-3695828	0	1.0

1. spacer 1.15|1831884|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to position: 3695799-3695828, mismatch: 0, identity: 1.0

cagtaaaaactgaatcatacagatgataag	CRISPR spacer
cagtaaaaactgaatcatacagatgataag	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP022058_1	1.36\|1833501\|30\|NZ_CP022058\|CRISPRCasFinder	1833501-1833530	30	MH853786	Acinetobacter phage vB_KpnM_IME285, complete genome	442-471	5	0.833
NZ_CP022058_1	1.36\|1833501\|30\|NZ_CP022058\|CRISPRCasFinder	1833501-1833530	30	NZ_CP014203	Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence	103154-103183	5	0.833
NZ_CP022058_1	1.18\|1832115\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1832115-1832144	30	NZ_CP033461	Brevibacillus laterosporus strain 1821L plasmid p1821L01, complete sequence	62875-62904	6	0.8
NZ_CP022058_1	1.19\|1832192\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1832192-1832221	30	NZ_CP033461	Brevibacillus laterosporus strain 1821L plasmid p1821L01, complete sequence	62875-62904	6	0.8
NZ_CP022058_1	1.30\|1833039\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833039-1833068	30	NC_019526	Enterobacteria phage vB_KleM-RaK2, complete genome	119765-119794	6	0.8
NZ_CP022058_1	1.30\|1833039\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833039-1833068	30	MT708547	Klebsiella phage Muenster, complete genome	241443-241472	6	0.8
NZ_CP022058_1	1.30\|1833039\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833039-1833068	30	AB897757	Klebsiella phage K64-1 DNA, complete genome	119710-119739	6	0.8
NZ_CP022058_1	1.4\|1831038\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831038-1831067	30	MN840485	Escherichia phage 2725-N35, complete genome	27261-27290	7	0.767
NZ_CP022058_1	1.7\|1831269\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831269-1831298	30	MN840485	Escherichia phage 2725-N35, complete genome	27261-27290	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_019005	Borrelia burgdorferi 297 plasmid 297_cp32-6, complete sequence	2050-2079	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NZ_CP019918	Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence	26006-26035	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NZ_CP019920	Borreliella burgdorferi strain PAbe plasmid p_cp32-3, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_018980	Borrelia burgdorferi 297 plasmid 297_cp32-7, complete sequence	1881-1910	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_018981	Borrelia burgdorferi 297 plasmid 297_cp32-5, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_019003	Borrelia burgdorferi 297 plasmid 297_cp32-1, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_017427	Borreliella burgdorferi JD1 plasmid JD1 cp32-3, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_017423	Borreliella burgdorferi N40 plasmid N40_cp32-12, complete sequence	2042-2071	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_017396	Borreliella burgdorferi JD1 plasmid JD1 cp32-12, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_017397	Borreliella burgdorferi JD1 plasmid JD1 cp32-9, complete sequence	2050-2079	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_017425	Borreliella burgdorferi JD1 plasmid JD1 cp32-6, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_017426	Borreliella burgdorferi JD1 plasmid JD1 cp32-8, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NZ_CP031408	Borreliella burgdorferi strain MM1 plasmid plsm_cp32-1, complete sequence	21662-21691	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_011720	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-3+10, complete sequence	2050-2079	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NZ_CP028881	Borreliella bavariensis PBi plasmid cp32-7, complete sequence	21766-21795	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_000948	Borreliella burgdorferi B31 plasmid cp32-1, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_000949	Borreliella burgdorferi B31 plasmid cp32-3, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_000952	Borreliella burgdorferi B31 plasmid cp32-7, complete sequence	2046-2075	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_000953	Borreliella burgdorferi B31 plasmid cp32-8, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NZ_CP015801	Borrelia mayonii strain MN14-1539 plasmid cp32-4, complete sequence	2046-2075	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NZ_CP019846	Borreliella burgdorferi plasmid cp32-1, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NZ_CP019847	Borreliella burgdorferi plasmid cp32-3, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NZ_CP019849	Borreliella burgdorferi plasmid cp32-5, complete sequence	2045-2074	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NZ_CP019756	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence	2044-2073	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NZ_CP019756	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence	32722-32751	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NZ_CP019758	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-3, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_011731	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-1, complete sequence	2050-2079	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_011735	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-12, complete sequence	2050-2079	7	0.767
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NC_011736	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-4, complete sequence	2047-2076	7	0.767
NZ_CP022058_1	1.13\|1831730\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831730-1831759	30	MN840485	Escherichia phage 2725-N35, complete genome	27261-27290	7	0.767
NZ_CP022058_1	1.14\|1831807\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831807-1831836	30	AP013364	Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-C52A-MedDCM-OCT-S37-C18	13209-13238	7	0.767
NZ_CP022058_1	1.14\|1831807\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831807-1831836	30	AP013571	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S36-C174, * SEQUENCING IN PROGRESS *	6868-6897	7	0.767
NZ_CP022058_1	1.14\|1831807\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831807-1831836	30	AP013568	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S26-C21, * SEQUENCING IN PROGRESS *	31961-31990	7	0.767
NZ_CP022058_1	1.14\|1831807\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831807-1831836	30	AP013572	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S39-C170, * SEQUENCING IN PROGRESS *	4576-4605	7	0.767
NZ_CP022058_1	1.14\|1831807\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831807-1831836	30	AP013569	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S27-C145, * SEQUENCING IN PROGRESS *	6725-6754	7	0.767
NZ_CP022058_1	1.14\|1831807\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831807-1831836	30	AP013362	Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-C52A-MedDCM-OCT-S24-C15	8499-8528	7	0.767
NZ_CP022058_1	1.14\|1831807\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831807-1831836	30	AP013570	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S31-C10, * SEQUENCING IN PROGRESS *	10253-10282	7	0.767
NZ_CP022058_1	1.14\|1831807\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831807-1831836	30	AP013365	Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-C52A-MedDCM-OCT-S38-C20	31621-31650	7	0.767
NZ_CP022058_1	1.14\|1831807\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831807-1831836	30	AP013366	Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-C52A-MedDCM-OCT-S42-C25	3357-3386	7	0.767
NZ_CP022058_1	1.14\|1831807\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831807-1831836	30	AP013363	Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-C52A-MedDCM-OCT-S34-C21	35183-35212	7	0.767
NZ_CP022058_1	1.14\|1831807\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831807-1831836	30	AP013567	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S25-C162, * SEQUENCING IN PROGRESS *	5333-5362	7	0.767
NZ_CP022058_1	1.14\|1831807\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831807-1831836	30	AP013573	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S45-C187, * SEQUENCING IN PROGRESS *	7469-7498	7	0.767
NZ_CP022058_1	1.31\|1833116\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833116-1833145	30	NZ_AP014641	Leptolyngbya boryana IAM M-101 plasmid pLBY	43979-44008	7	0.767
NZ_CP022058_1	1.32\|1833193\|30\|NZ_CP022058\|CRISPRCasFinder	1833193-1833222	30	KC595513	Bacillus phage Shanette, complete genome	97447-97476	7	0.767
NZ_CP022058_1	1.32\|1833193\|30\|NZ_CP022058\|CRISPRCasFinder	1833193-1833222	30	NC_028982	Bacillus phage JL, complete genome	96737-96766	7	0.767
NZ_CP022058_1	1.36\|1833501\|30\|NZ_CP022058\|CRISPRCasFinder	1833501-1833530	30	NZ_CP011157	Bacillus cereus strain HN001 plasmid pRML02, complete sequence	24862-24891	7	0.767
NZ_CP022058_1	1.41\|1833886\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833886-1833915	30	JF270478	Psychrobacter phage Psymv2, complete genome	10007-10036	7	0.767
NZ_CP022058_1	1.41\|1833886\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833886-1833915	30	NZ_CP049117	Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed2, complete sequence	50514-50543	7	0.767
NZ_CP022058_1	1.41\|1833886\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833886-1833915	30	CP002509	Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26, complete sequence	7672-7701	7	0.767
NZ_CP022058_1	1.3\|1830961\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1830961-1830990	30	MN692999	Marine virus AFVG_117M75, complete genome	37139-37168	8	0.733
NZ_CP022058_1	1.6\|1831192\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831192-1831221	30	MN692999	Marine virus AFVG_117M75, complete genome	37139-37168	8	0.733
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	MF370964	Pseudoalteromonas phage SL20, complete genome	22348-22377	8	0.733
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	MN693416	Marine virus AFVG_25M53, complete genome	23587-23616	8	0.733
NZ_CP022058_1	1.9\|1831423\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831423-1831452	30	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	1580756-1580785	8	0.733
NZ_CP022058_1	1.9\|1831423\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831423-1831452	30	HQ634193	Cyanophage P-RSM6 genomic sequence	141261-141290	8	0.733
NZ_CP022058_1	1.12\|1831653\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831653-1831682	30	MN692999	Marine virus AFVG_117M75, complete genome	37139-37168	8	0.733
NZ_CP022058_1	1.18\|1832115\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1832115-1832144	30	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	142082-142111	8	0.733
NZ_CP022058_1	1.19\|1832192\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1832192-1832221	30	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	142082-142111	8	0.733
NZ_CP022058_1	1.22\|1832423\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1832423-1832452	30	NZ_CP050082	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence	531949-531978	8	0.733
NZ_CP022058_1	1.22\|1832423\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1832423-1832452	30	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	412968-412997	8	0.733
NZ_CP022058_1	1.22\|1832423\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1832423-1832452	30	NZ_CP053208	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence	428935-428964	8	0.733
NZ_CP022058_1	1.22\|1832423\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1832423-1832452	30	NZ_CP018230	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence	60903-60932	8	0.733
NZ_CP022058_1	1.25\|1832654\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1832654-1832683	30	NC_009929	Acaryochloris marina MBIC11017 plasmid pREB4, complete sequence	174074-174103	8	0.733
NZ_CP022058_1	1.27\|1832808\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1832808-1832837	30	LR134128	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 8	4262-4291	8	0.733
NZ_CP022058_1	1.30\|1833039\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833039-1833068	30	LN681534	Clostridium phage phiCD24-1, complete genome	9134-9163	8	0.733
NZ_CP022058_1	1.30\|1833039\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833039-1833068	30	NC_024355	Staphylococcus phage 6ec, complete genome	91613-91642	8	0.733
NZ_CP022058_1	1.30\|1833039\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833039-1833068	30	MF417892	Uncultured Caudovirales phage clone 2F_2, partial genome	5784-5813	8	0.733
NZ_CP022058_1	1.30\|1833039\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833039-1833068	30	MN718463	Clostridium phage phiCDKH01, complete genome	28496-28525	8	0.733
NZ_CP022058_1	1.31\|1833116\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833116-1833145	30	AB711120	Bacillus phage PM1 DNA, complete genome	8442-8471	8	0.733
NZ_CP022058_1	1.32\|1833193\|30\|NZ_CP022058\|CRISPRCasFinder	1833193-1833222	30	NZ_CP032828	Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence	423883-423912	8	0.733
NZ_CP022058_1	1.32\|1833193\|30\|NZ_CP022058\|CRISPRCasFinder	1833193-1833222	30	KC954775	UNVERIFIED: Cronobacter phage S13, complete genome	29092-29121	8	0.733
NZ_CP022058_1	1.32\|1833193\|30\|NZ_CP022058\|CRISPRCasFinder	1833193-1833222	30	NC_028773	Cronobacter phage S13, complete genome	29092-29121	8	0.733
NZ_CP022058_1	1.41\|1833886\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833886-1833915	30	KX119206	Helicobacter phage UKEN32U, complete genome	2792-2821	8	0.733
NZ_CP022058_1	1.41\|1833886\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833886-1833915	30	KX119174	Helicobacter phage UKEN31U, complete genome	2792-2821	8	0.733
NZ_CP022058_1	1.3\|1830961\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1830961-1830990	30	NC_024792	Bacillus phage Bobb, complete genome	97250-97279	9	0.7
NZ_CP022058_1	1.6\|1831192\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831192-1831221	30	NC_024792	Bacillus phage Bobb, complete genome	97250-97279	9	0.7
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	NZ_CP021873	Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence	50532-50561	9	0.7
NZ_CP022058_1	1.8\|1831346\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831346-1831375	30	AP014368	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C87, * SEQUENCING IN PROGRESS *	29185-29214	9	0.7
NZ_CP022058_1	1.12\|1831653\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1831653-1831682	30	NC_024792	Bacillus phage Bobb, complete genome	97250-97279	9	0.7
NZ_CP022058_1	1.23\|1832500\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1832500-1832529	30	MG945350	UNVERIFIED: Microviridae sp. isolate 2589-18011, complete genome	1651-1680	9	0.7
NZ_CP022058_1	1.30\|1833039\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833039-1833068	30	NZ_AP018282	Chondrocystis sp. NIES-4102 plasmid plasmid1 DNA, complete genome	48404-48433	9	0.7
NZ_CP022058_1	1.30\|1833039\|30\|NZ_CP022058\|CRISPRCasFinder,PILER-CR	1833039-1833068	30	NZ_CP033739	Enterococcus sp. FDAARGOS_553 plasmid unnamed1, complete sequence	39982-40011	9	0.7
NZ_CP022058_1	1.32\|1833193\|30\|NZ_CP022058\|CRISPRCasFinder	1833193-1833222	30	NZ_CP016623	Parageobacillus thermoglucosidasius strain Wild Type plasmid pNCI001, complete sequence	55742-55771	9	0.7

1. spacer 1.36|1833501|30|NZ_CP022058|CRISPRCasFinder matches to MH853786 (Acinetobacter phage vB_KpnM_IME285, complete genome) position: , mismatch: 5, identity: 0.833

tatattttattaaacatgtgcattctagca	CRISPR spacer
gatactttattaaccatgtgcattctctca	Protospacer
 ***.******** ************  **

2. spacer 1.36|1833501|30|NZ_CP022058|CRISPRCasFinder matches to NZ_CP014203 (Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence) position: , mismatch: 5, identity: 0.833

tatattttattaaacatgtgcattctagca-	CRISPR spacer
aatatttttttaaacatatgcatt-tatcat	Protospacer
 ******* ********.****** ** **

3. spacer 1.18|1832115|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP033461 (Brevibacillus laterosporus strain 1821L plasmid p1821L01, complete sequence) position: , mismatch: 6, identity: 0.8

ttcggttattatcgcaatatctttacttgt	CRISPR spacer
gccggttattatcgaaatatctttactcca	Protospacer
 .************ ************.

4. spacer 1.19|1832192|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP033461 (Brevibacillus laterosporus strain 1821L plasmid p1821L01, complete sequence) position: , mismatch: 6, identity: 0.8

ttcggttattatcgcaatatctttacttgt	CRISPR spacer
gccggttattatcgaaatatctttactcca	Protospacer
 .************ ************.

5. spacer 1.30|1833039|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_019526 (Enterobacteria phage vB_KleM-RaK2, complete genome) position: , mismatch: 6, identity: 0.8

tcgcatttgttcaactgtttcattttcata	CRISPR spacer
ttcaaattcttcaattgtttcattttcata	Protospacer
*.  * ** *****.***************

6. spacer 1.30|1833039|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to MT708547 (Klebsiella phage Muenster, complete genome) position: , mismatch: 6, identity: 0.8

tcgcatttgttcaactgtttcattttcata	CRISPR spacer
ttcaaattcttcaattgtttcattttcata	Protospacer
*.  * ** *****.***************

7. spacer 1.30|1833039|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AB897757 (Klebsiella phage K64-1 DNA, complete genome) position: , mismatch: 6, identity: 0.8

tcgcatttgttcaactgtttcattttcata	CRISPR spacer
ttcaaattcttcaattgtttcattttcata	Protospacer
*.  * ** *****.***************

8. spacer 1.4|1831038|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to MN840485 (Escherichia phage 2725-N35, complete genome) position: , mismatch: 7, identity: 0.767

tgttaatgaagcaattgcgcaat-ctaatgt	CRISPR spacer
tgttaatgaagaaattgcgctatgacagcg-	Protospacer
*********** ******** **  .*..*

9. spacer 1.7|1831269|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to MN840485 (Escherichia phage 2725-N35, complete genome) position: , mismatch: 7, identity: 0.767

tgttaatgaagcaattgcgcaat-ctaatgt	CRISPR spacer
tgttaatgaagaaattgcgctatgacagcg-	Protospacer
*********** ******** **  .*..*

10. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_019005 (Borrelia burgdorferi 297 plasmid 297_cp32-6, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

11. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP019918 (Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

12. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP019920 (Borreliella burgdorferi strain PAbe plasmid p_cp32-3, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

13. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_018980 (Borrelia burgdorferi 297 plasmid 297_cp32-7, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

14. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_018981 (Borrelia burgdorferi 297 plasmid 297_cp32-5, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

15. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_019003 (Borrelia burgdorferi 297 plasmid 297_cp32-1, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

16. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_017427 (Borreliella burgdorferi JD1 plasmid JD1 cp32-3, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

17. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_017423 (Borreliella burgdorferi N40 plasmid N40_cp32-12, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

18. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_017396 (Borreliella burgdorferi JD1 plasmid JD1 cp32-12, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

19. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_017397 (Borreliella burgdorferi JD1 plasmid JD1 cp32-9, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

20. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_017425 (Borreliella burgdorferi JD1 plasmid JD1 cp32-6, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

21. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_017426 (Borreliella burgdorferi JD1 plasmid JD1 cp32-8, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

22. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP031408 (Borreliella burgdorferi strain MM1 plasmid plsm_cp32-1, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

23. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_011720 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-3+10, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

24. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP028881 (Borreliella bavariensis PBi plasmid cp32-7, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

25. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_000948 (Borreliella burgdorferi B31 plasmid cp32-1, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

26. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_000949 (Borreliella burgdorferi B31 plasmid cp32-3, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

27. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_000952 (Borreliella burgdorferi B31 plasmid cp32-7, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

28. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_000953 (Borreliella burgdorferi B31 plasmid cp32-8, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

29. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP015801 (Borrelia mayonii strain MN14-1539 plasmid cp32-4, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttttt	Protospacer
 . ************ ****.****** .*

30. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP019846 (Borreliella burgdorferi plasmid cp32-1, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

31. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP019847 (Borreliella burgdorferi plasmid cp32-3, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

32. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP019849 (Borreliella burgdorferi plasmid cp32-5, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

33. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP019756 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

34. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP019756 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

35. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP019758 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-3, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

36. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_011731 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-1, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

37. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_011735 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-12, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

38. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_011736 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-4, complete sequence) position: , mismatch: 7, identity: 0.767

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
cattaatgcttgaatttctgcaactttctt	Protospacer
 . ************ ****.****** .*

39. spacer 1.13|1831730|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to MN840485 (Escherichia phage 2725-N35, complete genome) position: , mismatch: 7, identity: 0.767

tgttaatgaagcaattgcgcaat-ctaatgt	CRISPR spacer
tgttaatgaagaaattgcgctatgacagcg-	Protospacer
*********** ******** **  .*..*

40. spacer 1.14|1831807|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP013364 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-C52A-MedDCM-OCT-S37-C18) position: , mismatch: 7, identity: 0.767

cttctaaacgctcgattagtggctgaacaa	CRISPR spacer
cttcaaaacgctcgatttgtggctgcttgt	Protospacer
**** ************ *******  ..

41. spacer 1.14|1831807|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP013571 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S36-C174, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

cttctaaacgctcgattagtggctgaacaa	CRISPR spacer
cttcaaaacgctcgatttgtggctgcttgt	Protospacer
**** ************ *******  ..

42. spacer 1.14|1831807|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP013568 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S26-C21, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

cttctaaacgctcgattagtggctgaacaa	CRISPR spacer
cttcaaaacgctcgatttgtggctgcttgt	Protospacer
**** ************ *******  ..

43. spacer 1.14|1831807|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP013572 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S39-C170, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

cttctaaacgctcgattagtggctgaacaa	CRISPR spacer
cttcaaaacgctcgatttgtggctgcttgt	Protospacer
**** ************ *******  ..

44. spacer 1.14|1831807|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP013569 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S27-C145, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

cttctaaacgctcgattagtggctgaacaa	CRISPR spacer
cttcaaaacgctcgatttgtggctgcttgt	Protospacer
**** ************ *******  ..

45. spacer 1.14|1831807|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP013362 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-C52A-MedDCM-OCT-S24-C15) position: , mismatch: 7, identity: 0.767

cttctaaacgctcgattagtggctgaacaa	CRISPR spacer
cttcaaaacgctcgatttgtggctgcttgt	Protospacer
**** ************ *******  ..

46. spacer 1.14|1831807|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP013570 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S31-C10, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

cttctaaacgctcgattagtggctgaacaa	CRISPR spacer
cttcaaaacgctcgatttgtggctgcttgt	Protospacer
**** ************ *******  ..

47. spacer 1.14|1831807|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP013365 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-C52A-MedDCM-OCT-S38-C20) position: , mismatch: 7, identity: 0.767

cttctaaacgctcgattagtggctgaacaa	CRISPR spacer
cttcaaaacgctcgatttgtggctgcttgt	Protospacer
**** ************ *******  ..

48. spacer 1.14|1831807|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP013366 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-C52A-MedDCM-OCT-S42-C25) position: , mismatch: 7, identity: 0.767

cttctaaacgctcgattagtggctgaacaa	CRISPR spacer
cttcaaaacgctcgatttgtggctgcttgt	Protospacer
**** ************ *******  ..

49. spacer 1.14|1831807|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP013363 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-C52A-MedDCM-OCT-S34-C21) position: , mismatch: 7, identity: 0.767

cttctaaacgctcgattagtggctgaacaa	CRISPR spacer
cttcaaaacgctcgatttgtggctgcttgt	Protospacer
**** ************ *******  ..

50. spacer 1.14|1831807|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP013567 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S25-C162, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

cttctaaacgctcgattagtggctgaacaa	CRISPR spacer
cttcaaaacgctcgatttgtggctgcttgt	Protospacer
**** ************ *******  ..

51. spacer 1.14|1831807|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP013573 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C52A-MedDCM-OCT-S45-C187, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

cttctaaacgctcgattagtggctgaacaa	CRISPR spacer
cttcaaaacgctcgatttgtggctgcttgt	Protospacer
**** ************ *******  ..

52. spacer 1.31|1833116|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_AP014641 (Leptolyngbya boryana IAM M-101 plasmid pLBY) position: , mismatch: 7, identity: 0.767

attttctggagattcaatcatatacgcttc-	CRISPR spacer
atcttctggagattcaatcatg-gcactcat	Protospacer
**.******************. .*.**.

53. spacer 1.32|1833193|30|NZ_CP022058|CRISPRCasFinder matches to KC595513 (Bacillus phage Shanette, complete genome) position: , mismatch: 7, identity: 0.767

agagatgtggaaagctttacaaaatggatg	CRISPR spacer
aatgatggggaaagctttacaagatgttgg	Protospacer
*. **** **************.***   *

54. spacer 1.32|1833193|30|NZ_CP022058|CRISPRCasFinder matches to NC_028982 (Bacillus phage JL, complete genome) position: , mismatch: 7, identity: 0.767

agagatgtggaaagctttacaaaatggatg	CRISPR spacer
aatgatggggaaagctttacaagatgttgg	Protospacer
*. **** **************.***   *

55. spacer 1.36|1833501|30|NZ_CP022058|CRISPRCasFinder matches to NZ_CP011157 (Bacillus cereus strain HN001 plasmid pRML02, complete sequence) position: , mismatch: 7, identity: 0.767

tatattttattaaacatgtgcattctagca	CRISPR spacer
aatattttattaaacttgtgcaaaaaagaa	Protospacer
 ************** ******    ** *

56. spacer 1.41|1833886|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to JF270478 (Psychrobacter phage Psymv2, complete genome) position: , mismatch: 7, identity: 0.767

ggaattttttgataattgtgggtttggagg	CRISPR spacer
gtcttggtttgataattgtaggtttggaga	Protospacer
*   *  ************.*********.

57. spacer 1.41|1833886|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP049117 (Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

ggaattttttgataattgtgggtttggagg	CRISPR spacer
ataatttattgataattatgggtttaaagt	Protospacer
. ***** *********.*******..**

58. spacer 1.41|1833886|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to CP002509 (Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26, complete sequence) position: , mismatch: 7, identity: 0.767

ggaattttttgataattgtgggtttggagg	CRISPR spacer
ttaatttttggataattgtaggtttatagt	Protospacer
  ******* *********.*****. **

59. spacer 1.3|1830961|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to MN692999 (Marine virus AFVG_117M75, complete genome) position: , mismatch: 8, identity: 0.733

attgatggataaagttctccttctgcttcc	CRISPR spacer
tcttctgcataaagttcttcttctgcttgt	Protospacer
 .*  ** **********.********* .

60. spacer 1.6|1831192|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to MN692999 (Marine virus AFVG_117M75, complete genome) position: , mismatch: 8, identity: 0.733

attgatggataaagttctccttctgcttcc	CRISPR spacer
tcttctgcataaagttcttcttctgcttgt	Protospacer
 .*  ** **********.********* .

61. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to MF370964 (Pseudoalteromonas phage SL20, complete genome) position: , mismatch: 8, identity: 0.733

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
ggacgatgcttgaaaatctgtcactttaga	Protospacer
.*...********* ****** ******

62. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to MN693416 (Marine virus AFVG_25M53, complete genome) position: , mismatch: 8, identity: 0.733

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
tgcagatgcttcaatatcagtaactttatc	Protospacer
 *  .****** ****** *********..

63. spacer 1.9|1831423|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 8, identity: 0.733

catgatacattagaacattgtggtttatca	CRISPR spacer
agaggaacattagaacattatgctttatct	Protospacer
 . *. *************.** ******

64. spacer 1.9|1831423|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to HQ634193 (Cyanophage P-RSM6 genomic sequence) position: , mismatch: 8, identity: 0.733

catgatacattagaacattgtggtttatca	CRISPR spacer
atcgatacattcgaaaattgtggtttctgt	Protospacer
  .******** *** ********** *

65. spacer 1.12|1831653|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to MN692999 (Marine virus AFVG_117M75, complete genome) position: , mismatch: 8, identity: 0.733

attgatggataaagttctccttctgcttcc	CRISPR spacer
tcttctgcataaagttcttcttctgcttgt	Protospacer
 .*  ** **********.********* .

66. spacer 1.18|1832115|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

ttcggttattatcgcaatatctttacttgt	CRISPR spacer
tctactttttatcgcaatatctttaattcc	Protospacer
*... ** ***************** ** .

67. spacer 1.19|1832192|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

ttcggttattatcgcaatatctttacttgt	CRISPR spacer
tctactttttatcgcaatatctttaattcc	Protospacer
*... ** ***************** ** .

68. spacer 1.22|1832423|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 8, identity: 0.733

atctcgtgcgctatggttccttcacgtgcg	CRISPR spacer
cggtcgtgcgcgatgtttccttcacggtgg	Protospacer
   ******** *** **********   *

69. spacer 1.22|1832423|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 8, identity: 0.733

atctcgtgcgctatggttccttcacgtgcg	CRISPR spacer
cggtcgtgcgcgatgtttccttcacggtgg	Protospacer
   ******** *** **********   *

70. spacer 1.22|1832423|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 8, identity: 0.733

atctcgtgcgctatggttccttcacgtgcg	CRISPR spacer
cggtcgtgcgcgatgtttccttcacggtgg	Protospacer
   ******** *** **********   *

71. spacer 1.22|1832423|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

atctcgtgcgctatggttccttcacgtgcg	CRISPR spacer
cggtcgtgcgcgatgtttccttcacggtgg	Protospacer
   ******** *** **********   *

72. spacer 1.25|1832654|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_009929 (Acaryochloris marina MBIC11017 plasmid pREB4, complete sequence) position: , mismatch: 8, identity: 0.733

cttatcaaggtgtcctgatattacataata	CRISPR spacer
actagataggtgtcctgatattacagaact	Protospacer
 .**   ****************** **.

73. spacer 1.27|1832808|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to LR134128 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 8) position: , mismatch: 8, identity: 0.733

ttttctttttggccacccagcat--ctggcaa	CRISPR spacer
gcttctttttggccacccggcatgattgat--	Protospacer
 .****************.****  .**..

74. spacer 1.30|1833039|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to LN681534 (Clostridium phage phiCD24-1, complete genome) position: , mismatch: 8, identity: 0.733

tcgcatttgttcaactgtttcattttcata	CRISPR spacer
cggattttgttcaactgtttcaatttgaac	Protospacer
. *  ***************** *** *

75. spacer 1.30|1833039|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 8, identity: 0.733

tcgcatttgttcaactgtttcattttcata	CRISPR spacer
tttaatttgttctaatgtttcattttccat	Protospacer
*.  ******** * ************

76. spacer 1.30|1833039|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to MF417892 (Uncultured Caudovirales phage clone 2F_2, partial genome) position: , mismatch: 8, identity: 0.733

tcgcatttgttcaactgtttcattttcata	CRISPR spacer
ttctacaaattcacctgtttcattttcata	Protospacer
*. .*.  .**** ****************

77. spacer 1.30|1833039|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to MN718463 (Clostridium phage phiCDKH01, complete genome) position: , mismatch: 8, identity: 0.733

tcgcatttgttcaactgtttcattttcata	CRISPR spacer
cggattttgttcaactgtttcaatttgaac	Protospacer
. *  ***************** *** *

78. spacer 1.31|1833116|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AB711120 (Bacillus phage PM1 DNA, complete genome) position: , mismatch: 8, identity: 0.733

attttctggagattcaatcatatacgcttc	CRISPR spacer
gggcttcggagatttaatcatatacgcttt	Protospacer
.  .*..*******.**************.

79. spacer 1.32|1833193|30|NZ_CP022058|CRISPRCasFinder matches to NZ_CP032828 (Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

agagatgtggaaagctttacaaaatggatg	CRISPR spacer
gccgcgatggaaagctttaccaaatcgatg	Protospacer
.  *  .************* **** ****

80. spacer 1.32|1833193|30|NZ_CP022058|CRISPRCasFinder matches to KC954775 (UNVERIFIED: Cronobacter phage S13, complete genome) position: , mismatch: 8, identity: 0.733

agagatgtggaaagctttacaaaatggatg	CRISPR spacer
tacgatgtggaaagttctacaaaatgaact	Protospacer
 . ***********.*.*********.*.

81. spacer 1.32|1833193|30|NZ_CP022058|CRISPRCasFinder matches to NC_028773 (Cronobacter phage S13, complete genome) position: , mismatch: 8, identity: 0.733

agagatgtggaaagctttacaaaatggatg	CRISPR spacer
tacgatgtggaaagttctacaaaatgaact	Protospacer
 . ***********.*.*********.*.

82. spacer 1.41|1833886|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to KX119206 (Helicobacter phage UKEN32U, complete genome) position: , mismatch: 8, identity: 0.733

ggaattttttgataattgtgggtttggagg	CRISPR spacer
ccgcttttttgataatggtgggtttaggga	Protospacer
  . ************ ********.*.*.

83. spacer 1.41|1833886|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to KX119174 (Helicobacter phage UKEN31U, complete genome) position: , mismatch: 8, identity: 0.733

ggaattttttgataattgtgggtttggagg	CRISPR spacer
ccgcttttttgataatggtgggtttaggga	Protospacer
  . ************ ********.*.*.

84. spacer 1.3|1830961|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_024792 (Bacillus phage Bobb, complete genome) position: , mismatch: 9, identity: 0.7

attgatggataaagttctccttctgcttcc	CRISPR spacer
ccgtctacataaagttctccttctacttct	Protospacer
 .   *. ****************.****.

85. spacer 1.6|1831192|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_024792 (Bacillus phage Bobb, complete genome) position: , mismatch: 9, identity: 0.7

attgatggataaagttctccttctgcttcc	CRISPR spacer
ccgtctacataaagttctccttctacttct	Protospacer
 .   *. ****************.****.

86. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP021873 (Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence) position: , mismatch: 9, identity: 0.7

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
ctcacatgcttgaatatctaaaactttaac	Protospacer
     **************. ******* .

87. spacer 1.8|1831346|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to AP014368 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C87, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.7

aggtaatgcttgaatatctgtaactttact	CRISPR spacer
tttgactgcttgaatatcagtaactttctg	Protospacer
    * ************ ******** .

88. spacer 1.12|1831653|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NC_024792 (Bacillus phage Bobb, complete genome) position: , mismatch: 9, identity: 0.7

attgatggataaagttctccttctgcttcc	CRISPR spacer
ccgtctacataaagttctccttctacttct	Protospacer
 .   *. ****************.****.

89. spacer 1.23|1832500|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to MG945350 (UNVERIFIED: Microviridae sp. isolate 2589-18011, complete genome) position: , mismatch: 9, identity: 0.7

ttagttgcaatatatatctttgcaatgcag	CRISPR spacer
gtgagcaaaatatatatctttgcattgcaa	Protospacer
 *.. .. **************** ****.

90. spacer 1.30|1833039|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_AP018282 (Chondrocystis sp. NIES-4102 plasmid plasmid1 DNA, complete genome) position: , mismatch: 9, identity: 0.7

tcgcatttgttcaactgtttcattttcata	CRISPR spacer
gaacatttgttctactgtttgattttttcc	Protospacer
  .********* ******* *****. .

91. spacer 1.30|1833039|30|NZ_CP022058|CRISPRCasFinder,PILER-CR matches to NZ_CP033739 (Enterococcus sp. FDAARGOS_553 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgcatttgttcaactgtttcattttcata	CRISPR spacer
atttgtttgttcgactgtttcattctcacc	Protospacer
 . ..*******.***********.***.

92. spacer 1.32|1833193|30|NZ_CP022058|CRISPRCasFinder matches to NZ_CP016623 (Parageobacillus thermoglucosidasius strain Wild Type plasmid pNCI001, complete sequence) position: , mismatch: 9, identity: 0.7

agagatgtggaaagctttacaaaatggatg	CRISPR spacer
ttctcttcggaaagctttaaaaaatggatt	Protospacer
     * .*********** *********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1215719 : 1259734

Staphylococcus_phage(33.33%)

integrase,holin,transposase

attL 1236857:1236872|attR 1262116:1262131

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027375148.1\|1215719_1216184_-\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA
WP_027375147.1\|1216271_1218665_-	3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_027375146.1\|1218720_1219173_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_034737806.1\|1219342_1220263_-	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	1.9e-11	28.3
WP_185133764.1\|1220611_1221583_-	iron ABC transporter permease	NA	NA	NA	NA
WP_027375143.1\|1221607_1222168_-	redoxin family protein	NA	NA	NA	NA
WP_027375142.1\|1222201_1223326_+	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_027375141.1\|1223322_1223940_+	YdcF family protein	NA	NA	NA	NA
WP_034737800.1\|1223936_1226537_-	BamA/TamA family outer membrane protein	NA	NA	NA	NA
WP_027375139.1\|1226522_1227248_+	RNA methyltransferase	NA	NA	NA	NA
WP_088583637.1\|1227353_1227854_-	phosphoribosyl-ATP pyrophosphatase	NA	NA	NA	NA
WP_027375137.1\|1227857_1228166_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_027375136.1\|1228247_1228598_-	YtxH domain-containing protein	NA	NA	NA	NA
WP_088583638.1\|1228692_1229367_-	(d)CMP kinase	NA	NA	NA	NA
WP_088583639.1\|1229450_1230443_-	type IX secretion system protein PorQ	NA	NA	NA	NA
WP_027375133.1\|1230610_1231318_+	UMP kinase	NA	NA	NA	NA
WP_027375132.1\|1231579_1231834_-	hypothetical protein	NA	NA	NA	NA
WP_034737317.1\|1232162_1235030_-	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_034737319.1\|1235120_1236047_-\|integrase	site-specific integrase	A0A1X9I6A9	Streptococcus_phage	1.1e-22	28.7
WP_088585020.1\|1236185_1237274_+	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	1.6e-09	24.5
1236857:1236872	attL	NA	NA	NA	NA
WP_052003808.1\|1237266_1237761_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_088583640.1\|1237732_1238482_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_088583641.1\|1238474_1239626_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_034737331.1\|1239673_1241224_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	2.6e-162	56.4
WP_034737333.1\|1241486_1242326_-	RteC domain-containing protein	NA	NA	NA	NA
WP_052003810.1\|1242541_1242802_+	hypothetical protein	NA	NA	NA	NA
WP_139229435.1\|1242785_1243109_-	DUF4298 domain-containing protein	NA	NA	NA	NA
WP_052003811.1\|1243745_1244351_+	serine acetyltransferase	NA	NA	NA	NA
WP_073067027.1\|1244391_1245618_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_034737341.1\|1246607_1247405_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_034737343.1\|1247414_1247810_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_034737345.1\|1247857_1248643_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_167593867.1\|1248883_1250404_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.2e-74	34.0
WP_034737329.1\|1250427_1251165_+	ATP-binding protein	NA	NA	NA	NA
WP_088583642.1\|1251177_1251903_-	cysteine hydrolase	NA	NA	NA	NA
WP_139258875.1\|1251915_1252983_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_034737349.1\|1253085_1253403_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_034737351.1\|1253432_1254698_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_034737353.1\|1254702_1255137_-	hypothetical protein	NA	NA	NA	NA
WP_052003813.1\|1255682_1256183_+	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_052003814.1\|1256695_1257076_+	hypothetical protein	NA	NA	NA	NA
WP_034737355.1\|1257176_1257473_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_034737357.1\|1257469_1257751_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_034737427.1\|1257828_1258398_-	hypothetical protein	NA	NA	NA	NA
WP_034737359.1\|1258483_1259734_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	3.7e-26	29.8
1262116:1262131	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2846561 : 2854870

Pelagibacter_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027374503.1\|2846561_2847353_-	NAD(+) synthase	M1IPF8	Pelagibacter_phage	2.5e-60	52.2
WP_088584260.1\|2847364_2847895_-	N-acetyltransferase	A0A1P8CWJ6	Bacillus_phage	3.2e-40	49.7
WP_088584261.1\|2847898_2848423_-	GNAT family N-acetyltransferase	G9BWD5	Planktothrix_phage	2.9e-17	33.3
WP_088584262.1\|2848431_2849070_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_027374507.1\|2849122_2850106_+	hypothetical protein	NA	NA	NA	NA
WP_027374508.1\|2850182_2851085_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-40	46.4
WP_088584263.1\|2851091_2853293_+	redoxin domain-containing protein	A0A1J0GW78	Streptomyces_phage	6.3e-05	39.7
WP_027374510.1\|2853317_2853641_+	gliding motility protein GldC	NA	NA	NA	NA
WP_027374511.1\|2853730_2854870_+	cystathionine gamma-synthase	A0A0B5JD48	Pandoravirus	9.8e-26	33.8

DBSCAN-SWA_3

4004898 : 4010767

Cellulophaga_phage(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088584643.1\|4004898_4005627_-	serine/threonine protein phosphatase	S0A0Y6	Cellulophaga_phage	1.9e-43	37.6
WP_088584644.1\|4005629_4006172_-	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	1.5e-45	51.7
WP_088584645.1\|4006291_4007239_-	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	9.5e-43	33.9
WP_027372177.1\|4007238_4007925_-	NAD-dependent deacylase	R9TG77	Vibrio_phage	3.6e-31	40.4
WP_088584646.1\|4007929_4008436_-	O-acetyl-ADP-ribose deacetylase	A0A0K1L687	Scale_drop_disease_virus	9.0e-32	52.8
WP_088584647.1\|4008432_4009248_-	TIGR02452 family protein	G3MBH6	Bacillus_virus	1.1e-47	40.1
WP_088584648.1\|4009250_4009664_-	ADP-ribosylation/crystallin J1	NA	NA	NA	NA
WP_088584649.1\|4009685_4010279_-	DUF4291 domain-containing protein	NA	NA	NA	NA
WP_061085243.1\|4010290_4010767_-	macro domain-containing protein	A0A2L1IVW3	Streptomyces_phage	1.4e-29	45.6

DBSCAN-SWA_4

4698401 : 4745427

Tupanvirus(40.0%)

tail,protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088584365.1\|4698401_4699742_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_088584844.1\|4699843_4701181_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_027373970.1\|4701314_4702313_-\|protease	zinc metalloprotease	A0A2K9L5D3	Tupanvirus	4.5e-19	28.9
WP_027373971.1\|4702676_4703684_-\|protease	zinc metalloprotease	A0A2K9KZL9	Tupanvirus	2.9e-21	30.1
WP_027373972.1\|4704135_4704777_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.4e-05	35.1
WP_027373973.1\|4704773_4705559_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_088584845.1\|4706211_4706742_-	hypothetical protein	NA	NA	NA	NA
WP_155857895.1\|4706941_4707091_-	hypothetical protein	NA	NA	NA	NA
WP_034737300.1\|4707238_4709833_-	ATP-dependent chaperone ClpB	A0A223W0B1	Agrobacterium_phage	6.3e-121	34.2
WP_034737303.1\|4710225_4710804_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_088584846.1\|4710962_4712279_+	phenylacetate--CoA ligase	NA	NA	NA	NA
WP_088584847.1\|4712278_4713364_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_027373979.1\|4713440_4714379_+	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA
WP_027373980.1\|4714491_4714773_+	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA
WP_027373981.1\|4714863_4715613_+	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA
WP_027373982.1\|4715706_4716171_+	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA
WP_088584848.1\|4716278_4718099_+	hypothetical protein	NA	NA	NA	NA
WP_027373984.1\|4718306_4719107_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_027373985.1\|4719227_4720358_+	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
WP_034737311.1\|4720364_4720673_+	hypothetical protein	NA	NA	NA	NA
WP_088584849.1\|4720675_4721089_+	PaaI family thioesterase	NA	NA	NA	NA
WP_088584850.1\|4721564_4722770_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_027373989.1\|4722872_4723466_+	transferase hexapeptide repeat family protein	NA	NA	NA	NA
WP_123840731.1\|4723478_4723664_+	hypothetical protein	NA	NA	NA	NA
WP_088584851.1\|4723699_4724527_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_088584852.1\|4724646_4727142_+	phenylacetic acid degradation bifunctional protein PaaZ	NA	NA	NA	NA
WP_034737406.1\|4727208_4727913_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_060868603.1\|4728096_4728870_+	DUF4241 domain-containing protein	NA	NA	NA	NA
WP_088584853.1\|4728879_4729566_+	SMUG2 DNA glycosylase family protein	NA	NA	NA	NA
WP_088584854.1\|4729645_4730467_-	T9SS type A sorting domain-containing protein	NA	NA	NA	NA
WP_027373995.1\|4730501_4731053_-\|tail	phage tail protein	NA	NA	NA	NA
WP_034737363.1\|4731304_4732069_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_027373997.1\|4732206_4732824_+	membrane protein	NA	NA	NA	NA
WP_027373998.1\|4732898_4733189_+	transcriptional regulator	NA	NA	NA	NA
WP_027373999.1\|4733290_4733776_+	hypothetical protein	NA	NA	NA	NA
WP_130867866.1\|4733783_4734101_+	hypothetical protein	NA	NA	NA	NA
WP_088584856.1\|4734111_4735482_+	DUF4173 domain-containing protein	NA	NA	NA	NA
WP_088584857.1\|4735488_4736166_+	DUF1361 domain-containing protein	NA	NA	NA	NA
WP_034737429.1\|4736250_4736790_+	hypothetical protein	NA	NA	NA	NA
WP_027374003.1\|4736848_4737361_+	hypothetical protein	NA	NA	NA	NA
WP_088584858.1\|4737439_4739095_-	S8 family peptidase	NA	NA	NA	NA
WP_088584859.1\|4739290_4740424_-	serine hydrolase	NA	NA	NA	NA
WP_060868565.1\|4740452_4741052_-	hypothetical protein	NA	NA	NA	NA
WP_027374006.1\|4741065_4741515_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_060868564.1\|4741822_4742656_+	GLPGLI family protein	NA	NA	NA	NA
WP_088584860.1\|4742700_4743159_-	hypothetical protein	NA	NA	NA	NA
WP_027374009.1\|4743269_4743740_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_088584861.1\|4743782_4744172_+	HIT family protein	NA	NA	NA	NA
WP_027374011.1\|4744239_4745427_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.2e-103	48.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022058

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection