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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP022085 Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence 1 crisprs DEDDh 0 3 1 0
NZ_CP022087 Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP022086 Escherichia coli O104:H4 strain FDAARGOS_348 chromosome, complete genome 4 crisprs PrimPol,cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT 0 12 15 0

Results visualization

1. NZ_CP022085
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022085_1 96819-97073 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_KY515225 Escherichia coli strain 244 plasmid AnCo2, complete sequence 18820-18873 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP050499 Escherichia coli strain RM13322 plasmid pRM13322, complete sequence 69808-69861 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_AP017612 Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence 1691-1744 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 CP022461 Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence 21467-21520 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP024271 Escherichia coli strain F8111-1SC3 plasmid unnamed2 75091-75144 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP048306 Escherichia coli strain 9 plasmid p009_B, complete sequence 1471-1524 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 MK125034 Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence 1691-1744 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 MK125035 Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence 1691-1744 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP027358 Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence 53856-53909 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP041423 Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence 18343-18396 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 CP053753 Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence 75450-75503 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NC_018651 Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence 62156-62209 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP024264 Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1 36034-36087 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP010153 Escherichia coli strain D9 plasmid A, complete genome 71601-71654 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP027369 Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence 83050-83103 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP010144 Escherichia coli strain D4 plasmid A, complete genome 71679-71732 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP019027 Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence 83835-83888 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP019002 Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence 94582-94635 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 CP045933 Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence 1471-1524 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP041451 Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence 1471-1524 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP034165 Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence 37107-37160 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP022085 Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence 96917-96970 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP014490 Escherichia coli strain G749 plasmid pG749_2, complete sequence 85747-85800 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NC_023916 Escherichia coli H89 plasmid pECOH89, complete sequence 1691-1744 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_LR213459 Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2 1471-1524 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_KY515224 Escherichia coli strain 243 plasmid AnCo1, complete sequence 106949-107002 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 MF554642 uncultured bacterium clone AA-105 plasmid pTIC, complete sequence 31093-31146 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 CP054387 Escherichia phage CMS-2020a, complete genome 1471-1524 0 1.0
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP025883 Escherichia coli strain 503440 plasmid p503440_100, complete sequence 64261-64314 1 0.981
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP025894 Escherichia coli strain 503025 plasmid p503025_100, complete sequence 86946-86999 1 0.981
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP025868 Escherichia coli strain 504211 plasmid p504211_100, complete sequence 28914-28967 1 0.981
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP025870 Escherichia coli strain 503829 plasmid p503829_100, complete sequence 633-686 1 0.981
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP019283 Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence 70427-70480 1 0.981
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP045191 Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence 1471-1524 1 0.981
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP041426 Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence 82641-82694 1 0.981
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 CP025897 Escherichia coli strain 500465 plasmid p500465_152, complete sequence 137199-137252 1 0.981
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP022167 Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence 1471-1524 1 0.981
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP015915 Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence 75929-75982 1 0.981
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP012114 Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence 63380-63433 1 0.981
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP023851 Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence 2682-2735 2 0.963
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP045278 Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence 1471-1524 2 0.963
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP019013 Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence 7833-7886 2 0.963
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 CP025888 Escherichia coli strain 503046 plasmid p503046_111, complete sequence 1472-1525 2 0.963
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 NZ_CP031136 Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence 104450-104503 2 0.963
NZ_CP022085_1 1.2|96917|54|NZ_CP022085|PILER-CR 96917-96970 54 CP053388 Escherichia phage CMS-2020a, complete sequence 1471-1524 2 0.963
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP050499 Escherichia coli strain RM13322 plasmid pRM13322, complete sequence 69878-69943 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_AP017612 Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence 1609-1674 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 CP022461 Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence 21385-21450 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 CP053753 Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence 75520-75585 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NC_018651 Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence 62074-62139 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 CP045933 Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence 1389-1454 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP022085 Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence 96835-96900 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_LR213459 Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2 1389-1454 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 CP054387 Escherichia phage CMS-2020a, complete genome 1389-1454 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP048306 Escherichia coli strain 9 plasmid p009_B, complete sequence 1389-1454 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP019283 Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence 70345-70410 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP019002 Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence 94500-94565 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP041451 Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence 1389-1454 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 MF554642 uncultured bacterium clone AA-105 plasmid pTIC, complete sequence 31011-31076 6 0.909
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP045278 Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence 1389-1454 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 CP025888 Escherichia coli strain 503046 plasmid p503046_111, complete sequence 1390-1455 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 CP053388 Escherichia phage CMS-2020a, complete sequence 1389-1454 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP025883 Escherichia coli strain 503440 plasmid p503440_100, complete sequence 64331-64396 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP025894 Escherichia coli strain 503025 plasmid p503025_100, complete sequence 86864-86929 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP025868 Escherichia coli strain 504211 plasmid p504211_100, complete sequence 28832-28897 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_KY515225 Escherichia coli strain 244 plasmid AnCo2, complete sequence 18890-18955 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP024271 Escherichia coli strain F8111-1SC3 plasmid unnamed2 75161-75226 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP025870 Escherichia coli strain 503829 plasmid p503829_100, complete sequence 551-616 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP045191 Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence 1389-1454 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP041426 Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence 82559-82624 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 MK125034 Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence 1609-1674 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 MK125035 Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence 1609-1674 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP027358 Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence 53774-53839 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP041423 Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence 18413-18478 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP024264 Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1 36104-36169 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP010153 Escherichia coli strain D9 plasmid A, complete genome 71519-71584 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 CP025897 Escherichia coli strain 500465 plasmid p500465_152, complete sequence 137269-137334 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP022167 Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence 1389-1454 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP027369 Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence 82968-83033 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP010144 Escherichia coli strain D4 plasmid A, complete genome 71597-71662 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP019027 Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence 83753-83818 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP015915 Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence 75999-76064 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP034165 Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence 37177-37242 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP014490 Escherichia coli strain G749 plasmid pG749_2, complete sequence 85665-85730 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NC_023916 Escherichia coli H89 plasmid pECOH89, complete sequence 1609-1674 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_KY515224 Escherichia coli strain 243 plasmid AnCo1, complete sequence 107019-107084 7 0.894
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP023851 Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence 2600-2665 8 0.879
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP019013 Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence 7903-7968 8 0.879
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP031136 Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence 104520-104585 8 0.879
NZ_CP022085_1 1.1|96835|66|NZ_CP022085|PILER-CR 96835-96900 66 NZ_CP012114 Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence 63450-63515 8 0.879
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP050499 Escherichia coli strain RM13322 plasmid pRM13322, complete sequence 69721-69791 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP023851 Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence 2752-2822 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 CP022461 Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence 21537-21607 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP045191 Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence 1541-1611 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP045278 Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence 1541-1611 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP041426 Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence 82711-82781 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP027358 Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence 53926-53996 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP041423 Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence 18256-18326 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP019013 Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence 7746-7816 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 CP053753 Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence 75363-75433 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NC_018651 Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence 62226-62296 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP010153 Escherichia coli strain D9 plasmid A, complete genome 71671-71741 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 CP025888 Escherichia coli strain 503046 plasmid p503046_111, complete sequence 1542-1612 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP022167 Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence 1541-1611 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP027369 Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence 83120-83190 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP010144 Escherichia coli strain D4 plasmid A, complete genome 71749-71819 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP019002 Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence 94652-94722 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 CP045933 Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence 1541-1611 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP015915 Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence 75842-75912 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP022085 Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence 96987-97057 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_LR213459 Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2 1541-1611 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 CP054387 Escherichia phage CMS-2020a, complete genome 1541-1611 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 CP053388 Escherichia phage CMS-2020a, complete sequence 1541-1611 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP025883 Escherichia coli strain 503440 plasmid p503440_100, complete sequence 64174-64244 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP025894 Escherichia coli strain 503025 plasmid p503025_100, complete sequence 87016-87086 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP025868 Escherichia coli strain 504211 plasmid p504211_100, complete sequence 28984-29054 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP025870 Escherichia coli strain 503829 plasmid p503829_100, complete sequence 703-773 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP048306 Escherichia coli strain 9 plasmid p009_B, complete sequence 1541-1611 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP019283 Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence 70497-70567 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 CP025897 Escherichia coli strain 500465 plasmid p500465_152, complete sequence 137112-137182 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP041451 Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence 1541-1611 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 MF554642 uncultured bacterium clone AA-105 plasmid pTIC, complete sequence 31163-31233 11 0.845
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_AP017612 Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence 1761-1831 12 0.831
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP024271 Escherichia coli strain F8111-1SC3 plasmid unnamed2 75004-75074 12 0.831
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP024264 Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1 35947-36017 12 0.831
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP019027 Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence 83906-83976 12 0.831
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP031136 Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence 104363-104433 12 0.831
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP034165 Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence 37020-37090 12 0.831
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP012114 Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence 63294-63364 12 0.831
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 MK125034 Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence 1761-1831 12 0.831
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 MK125035 Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence 1761-1831 12 0.831
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_CP014490 Escherichia coli strain G749 plasmid pG749_2, complete sequence 85817-85887 12 0.831
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NC_023916 Escherichia coli H89 plasmid pECOH89, complete sequence 1761-1831 12 0.831
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_KY515225 Escherichia coli strain 244 plasmid AnCo2, complete sequence 18733-18803 13 0.817
NZ_CP022085_1 1.3|96987|71|NZ_CP022085|PILER-CR 96987-97057 71 NZ_KY515224 Escherichia coli strain 243 plasmid AnCo1, complete sequence 106862-106932 13 0.817

1. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_KY515225 (Escherichia coli strain 244 plasmid AnCo2, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

2. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP050499 (Escherichia coli strain RM13322 plasmid pRM13322, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

3. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

4. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to CP022461 (Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

5. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP024271 (Escherichia coli strain F8111-1SC3 plasmid unnamed2) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

6. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

7. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to MK125034 (Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

8. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to MK125035 (Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

9. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP027358 (Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

10. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

11. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to CP053753 (Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

12. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NC_018651 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

13. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP024264 (Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

14. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP010153 (Escherichia coli strain D9 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

15. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP027369 (Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

16. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP010144 (Escherichia coli strain D4 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

17. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

18. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

19. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to CP045933 (Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

20. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP041451 (Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

21. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP034165 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

22. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP022085 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

23. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP014490 (Escherichia coli strain G749 plasmid pG749_2, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

24. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NC_023916 (Escherichia coli H89 plasmid pECOH89, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

25. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_LR213459 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

26. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_KY515224 (Escherichia coli strain 243 plasmid AnCo1, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

27. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to MF554642 (uncultured bacterium clone AA-105 plasmid pTIC, complete sequence) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

28. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to CP054387 (Escherichia phage CMS-2020a, complete genome) position: , mismatch: 0, identity: 1.0 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

29. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 1, identity: 0.981 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

30. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 1, identity: 0.981 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

31. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 1, identity: 0.981 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

32. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 1, identity: 0.981 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

33. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 1, identity: 0.981 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttataccaataccggtacacattattcatgcaatgtcttaa	Protospacer
******************** *********************************

34. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP045191 (Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence) position: , mismatch: 1, identity: 0.981 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatgtcttaa	Protospacer
**************************** *************************

35. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP041426 (Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence) position: , mismatch: 1, identity: 0.981 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatgtcttaa	Protospacer
**************************** *************************

36. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 1, identity: 0.981 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

37. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 1, identity: 0.981 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatgtcttaa	Protospacer
**************************** *************************

38. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP015915 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence) position: , mismatch: 1, identity: 0.981 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatgtcttaa	Protospacer
**************************** *************************

39. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 1, identity: 0.981 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgccttaa	Protospacer
************************************************.*****

40. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 2, identity: 0.963 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

41. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP045278 (Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence) position: , mismatch: 2, identity: 0.963 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

42. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 2, identity: 0.963 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

43. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to CP025888 (Escherichia coli strain 503046 plasmid p503046_111, complete sequence) position: , mismatch: 2, identity: 0.963 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

44. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 2, identity: 0.963 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

45. spacer 1.2|96917|54|NZ_CP022085|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 2, identity: 0.963 

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

46. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP050499 (Escherichia coli strain RM13322 plasmid pRM13322, complete sequence) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

47. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

48. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to CP022461 (Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

49. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to CP053753 (Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

50. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NC_018651 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

51. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to CP045933 (Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

52. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP022085 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

53. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_LR213459 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

54. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to CP054387 (Escherichia phage CMS-2020a, complete genome) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

55. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

56. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

57. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

58. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP041451 (Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

59. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to MF554642 (uncultured bacterium clone AA-105 plasmid pTIC, complete sequence) position: , mismatch: 6, identity: 0.909 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

60. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP045278 (Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

61. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to CP025888 (Escherichia coli strain 503046 plasmid p503046_111, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

62. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

63. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

64. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

65. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

66. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_KY515225 (Escherichia coli strain 244 plasmid AnCo2, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

67. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP024271 (Escherichia coli strain F8111-1SC3 plasmid unnamed2) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

68. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

69. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP045191 (Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

70. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP041426 (Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

71. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to MK125034 (Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

72. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to MK125035 (Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

73. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP027358 (Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

74. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

75. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP024264 (Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

76. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP010153 (Escherichia coli strain D9 plasmid A, complete genome) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

77. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

78. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

79. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP027369 (Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

80. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP010144 (Escherichia coli strain D4 plasmid A, complete genome) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

81. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

82. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP015915 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

83. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP034165 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

84. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP014490 (Escherichia coli strain G749 plasmid pG749_2, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

85. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NC_023916 (Escherichia coli H89 plasmid pECOH89, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

86. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_KY515224 (Escherichia coli strain 243 plasmid AnCo1, complete sequence) position: , mismatch: 7, identity: 0.894 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

87. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 8, identity: 0.879 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gtgttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
** ***********************************************.*********

88. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 8, identity: 0.879 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gtgttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
** ***********************************************.*********

89. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 8, identity: 0.879 

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gtgttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
** ***********************************************.*********

90. spacer 1.1|96835|66|NZ_CP022085|PILER-CR matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 8, identity: 0.879 

-gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtca	CRISPR spacer
tgttttattgaggaa-ttttgtttggatatgctatcagcggtaattaatggcatatgtca	Protospacer
 ************** ********************************************

91. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP050499 (Escherichia coli strain RM13322 plasmid pRM13322, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

92. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

93. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to CP022461 (Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

94. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP045191 (Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

95. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP045278 (Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

96. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP041426 (Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

97. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP027358 (Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

98. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

99. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

100. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to CP053753 (Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

101. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NC_018651 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

102. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP010153 (Escherichia coli strain D9 plasmid A, complete genome) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

103. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to CP025888 (Escherichia coli strain 503046 plasmid p503046_111, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

104. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

105. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP027369 (Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

106. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP010144 (Escherichia coli strain D4 plasmid A, complete genome) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

107. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

108. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to CP045933 (Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

109. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP015915 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

110. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP022085 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

111. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_LR213459 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

112. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to CP054387 (Escherichia phage CMS-2020a, complete genome) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

113. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

114. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

115. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

116. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

117. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

118. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

119. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

120. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

121. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP041451 (Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

122. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to MF554642 (uncultured bacterium clone AA-105 plasmid pTIC, complete sequence) position: , mismatch: 11, identity: 0.845 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

123. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 12, identity: 0.831 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaaacgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
****** *****************************************************

124. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP024271 (Escherichia coli strain F8111-1SC3 plasmid unnamed2) position: , mismatch: 12, identity: 0.831 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgatatagactctcgatatgctatcagcgg	Protospacer
********************************* **************************

125. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP024264 (Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1) position: , mismatch: 12, identity: 0.831 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaaacgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
****** *****************************************************

126. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 12, identity: 0.831 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaaacgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
****** *****************************************************

127. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 12, identity: 0.831 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaagaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
***.********************************************************

128. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP034165 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence) position: , mismatch: 12, identity: 0.831 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaaacgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
****** *****************************************************

129. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 12, identity: 0.831 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
taaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
 ***********************************************************

130. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to MK125034 (Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence) position: , mismatch: 12, identity: 0.831 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagataaactctcgatatgctatcagcgg	Protospacer
*************************************.**********************

131. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to MK125035 (Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence) position: , mismatch: 12, identity: 0.831 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagataaactctcgatatgctatcagcgg	Protospacer
*************************************.**********************

132. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_CP014490 (Escherichia coli strain G749 plasmid pG749_2, complete sequence) position: , mismatch: 12, identity: 0.831 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagataaactctcgatatgctatcagcgg	Protospacer
*************************************.**********************

133. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NC_023916 (Escherichia coli H89 plasmid pECOH89, complete sequence) position: , mismatch: 12, identity: 0.831 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagataaactctcgatatgctatcagcgg	Protospacer
*************************************.**********************

134. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_KY515225 (Escherichia coli strain 244 plasmid AnCo2, complete sequence) position: , mismatch: 13, identity: 0.817 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgggcggtgatatagactctcgatatgctatcagcgg	Protospacer
*************************.******* **************************

135. spacer 1.3|96987|71|NZ_CP022085|PILER-CR matches to NZ_KY515224 (Escherichia coli strain 243 plasmid AnCo1, complete sequence) position: , mismatch: 13, identity: 0.817 

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgggcggtgatatagactctcgatatgctatcagcgg	Protospacer
*************************.******* **************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 109515 122 Salmonella_phage(81.65%) integrase,tRNA,portal,terminase,tail attL 2177:2191|attR 30254:30268

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP022086
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022086_1 104868-104964 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022086_2 1435672-1435802 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022086_3 2770542-2770631 TypeI-E I-E
1 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022086_4 2797679-2798500 Orphan I-E
13 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP022086_2 2.1|1435713|49|NZ_CP022086|CRISPRCasFinder 1435713-1435761 49 KJ603229 Shigella phage POCJ13, complete genome 10125-10173 0 1.0
NZ_CP022086_2 2.1|1435713|49|NZ_CP022086|CRISPRCasFinder 1435713-1435761 49 NC_029120 Shigella phage 75/02 Stx, complete genome 10125-10173 0 1.0
NZ_CP022086_4 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT 2798135-2798166 32 MN693005 Marine virus AFVG_117M50, complete genome 6262-6293 7 0.781
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NZ_CP038598 Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence 2052-2083 7 0.781
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NZ_CP033827 Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence 693-724 7 0.781
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NZ_CP029125 Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence 518-549 7 0.781
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NZ_AP019693 Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence 2812-2843 7 0.781
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NZ_CP030192 Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence 1835-1866 7 0.781
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NZ_CP039274 Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence 118-149 7 0.781
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NZ_CP016528 Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence 53-84 7 0.781
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NZ_CP030227 Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence 3124-3155 7 0.781
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NC_013090 Endophytic bacterium LOB-07 plasmid pLK39, complete sequence 53-84 7 0.781
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NZ_CP030009 Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence 2572-2603 7 0.781
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NZ_CP011606 Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence 3835-3866 7 0.781
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NZ_CP044113 Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence 3639-3670 7 0.781
NZ_CP022086_4 4.25|2798379|33|NZ_CP022086|PILER-CR 2798379-2798411 33 NZ_CP038598 Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence 2051-2083 7 0.788
NZ_CP022086_4 4.25|2798379|33|NZ_CP022086|PILER-CR 2798379-2798411 33 NZ_CP033827 Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence 692-724 7 0.788
NZ_CP022086_4 4.25|2798379|33|NZ_CP022086|PILER-CR 2798379-2798411 33 NZ_CP029125 Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence 518-550 7 0.788
NZ_CP022086_4 4.25|2798379|33|NZ_CP022086|PILER-CR 2798379-2798411 33 NZ_AP019693 Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence 2811-2843 7 0.788
NZ_CP022086_4 4.25|2798379|33|NZ_CP022086|PILER-CR 2798379-2798411 33 NZ_CP030192 Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence 1835-1867 7 0.788
NZ_CP022086_4 4.25|2798379|33|NZ_CP022086|PILER-CR 2798379-2798411 33 NZ_CP039274 Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence 118-150 7 0.788
NZ_CP022086_4 4.25|2798379|33|NZ_CP022086|PILER-CR 2798379-2798411 33 NZ_CP016528 Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence 52-84 7 0.788
NZ_CP022086_4 4.25|2798379|33|NZ_CP022086|PILER-CR 2798379-2798411 33 NZ_CP030227 Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence 3123-3155 7 0.788
NZ_CP022086_4 4.25|2798379|33|NZ_CP022086|PILER-CR 2798379-2798411 33 NC_013090 Endophytic bacterium LOB-07 plasmid pLK39, complete sequence 52-84 7 0.788
NZ_CP022086_4 4.25|2798379|33|NZ_CP022086|PILER-CR 2798379-2798411 33 NZ_CP030009 Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence 2572-2604 7 0.788
NZ_CP022086_4 4.25|2798379|33|NZ_CP022086|PILER-CR 2798379-2798411 33 NZ_CP011606 Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence 3835-3867 7 0.788
NZ_CP022086_4 4.25|2798379|33|NZ_CP022086|PILER-CR 2798379-2798411 33 NZ_CP044113 Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence 3638-3670 7 0.788
NZ_CP022086_4 4.3|2797830|32|NZ_CP022086|CRISPRCasFinder,CRT 2797830-2797861 32 MK016501 Mycobacterium phage Nebkiss, complete genome 21454-21485 8 0.75
NZ_CP022086_4 4.3|2797830|32|NZ_CP022086|CRISPRCasFinder,CRT 2797830-2797861 32 NC_026590 Mycobacterium phage Gaia, complete genome 21453-21484 8 0.75
NZ_CP022086_4 4.5|2797952|32|NZ_CP022086|CRISPRCasFinder,CRT 2797952-2797983 32 NZ_CP010769 Phaeobacter piscinae strain P13 plasmid pP13_b, complete sequence 121002-121033 8 0.75
NZ_CP022086_4 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT 2798135-2798166 32 MK295204 Shigella phage vB_SdyM_006, complete genome 16122-16153 8 0.75
NZ_CP022086_4 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT 2798135-2798166 32 MG696114 Proteus phage phiP4-3, complete genome 149804-149835 8 0.75
NZ_CP022086_4 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT 2798135-2798166 32 NZ_CP017949 Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence 58006-58037 8 0.75
NZ_CP022086_4 4.10|2798257|32|NZ_CP022086|CRISPRCasFinder,CRT 2798257-2798288 32 AB452989 Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds 1966-1997 8 0.75
NZ_CP022086_4 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT 2798379-2798410 32 NC_019341 Pseudomonas syringae plasmid pNCPPB880-40, complete sequence 6612-6643 8 0.75
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP012265 Cronobacter condimenti 1330 strain LMG 26250 plasmid pCCO1, complete sequence 26063-26094 8 0.75
NZ_CP022086_4 4.16|2797830|33|NZ_CP022086|PILER-CR 2797830-2797862 33 MK016501 Mycobacterium phage Nebkiss, complete genome 21453-21485 8 0.758
NZ_CP022086_4 4.16|2797830|33|NZ_CP022086|PILER-CR 2797830-2797862 33 NC_026590 Mycobacterium phage Gaia, complete genome 21452-21484 8 0.758
NZ_CP022086_4 4.21|2798135|33|NZ_CP022086|PILER-CR 2798135-2798167 33 MN693005 Marine virus AFVG_117M50, complete genome 6262-6294 8 0.758
NZ_CP022086_4 4.26|2798440|33|NZ_CP022086|PILER-CR 2798440-2798472 33 NZ_CP012265 Cronobacter condimenti 1330 strain LMG 26250 plasmid pCCO1, complete sequence 26062-26094 8 0.758
NZ_CP022086_4 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT 2798135-2798166 32 AP022649 Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence 5394-5425 9 0.719
NZ_CP022086_4 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT 2798135-2798166 32 KC821606 Cellulophaga phage phi12:2, complete genome 1257-1288 9 0.719
NZ_CP022086_4 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT 2798135-2798166 32 KT070867 Bacillus phage PBC2, complete genome 154855-154886 9 0.719
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NC_006569 Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence 460266-460297 9 0.719
NZ_CP022086_4 4.21|2798135|33|NZ_CP022086|PILER-CR 2798135-2798167 33 MK295204 Shigella phage vB_SdyM_006, complete genome 16121-16153 9 0.727
NZ_CP022086_4 4.21|2798135|33|NZ_CP022086|PILER-CR 2798135-2798167 33 MG696114 Proteus phage phiP4-3, complete genome 149804-149836 9 0.727
NZ_CP022086_4 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT 2798135-2798166 32 KC821631 Cellulophaga phage phi48:1, complete genome 1257-1288 10 0.688
NZ_CP022086_4 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT 2798135-2798166 32 KC821628 Cellulophaga phage phi18:4, complete genome 1257-1288 10 0.688
NZ_CP022086_4 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT 2798135-2798166 32 NC_021805 Cellulophaga phage phi12a:1, complete genome 1257-1288 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP022775 Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence 1538980-1539011 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 1187025-1187056 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NC_014310 Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence 1615960-1615991 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP022762 Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence 1459996-1460027 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP023017 Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence 1531874-1531905 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP014703 Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence 1459018-1459049 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP022760 Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence 1526371-1526402 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP022789 Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence 1526372-1526403 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP022771 Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence 1459988-1460019 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP022777 Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence 1459341-1459372 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP022799 Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence 1459978-1460009 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP022764 Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence 1539145-1539176 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP022797 Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence 1539126-1539157 10 0.688
NZ_CP022086_4 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT 2798440-2798471 32 NZ_CP022758 Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence 1539107-1539138 10 0.688
NZ_CP022086_4 4.21|2798135|33|NZ_CP022086|PILER-CR 2798135-2798167 33 AP022649 Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence 5394-5426 10 0.697
NZ_CP022086_4 4.4|2797891|32|NZ_CP022086|CRISPRCasFinder,CRT 2797891-2797922 32 KU160664 Arthrobacter phage Salgado, complete genome 140-171 11 0.656
NZ_CP022086_4 4.4|2797891|32|NZ_CP022086|CRISPRCasFinder,CRT 2797891-2797922 32 MF140418 Arthrobacter phage LiSara, complete genome 140-171 11 0.656
NZ_CP022086_4 4.4|2797891|32|NZ_CP022086|CRISPRCasFinder,CRT 2797891-2797922 32 KU160654 Arthrobacter phage Laroye, complete genome 140-171 11 0.656

1. spacer 2.1|1435713|49|NZ_CP022086|CRISPRCasFinder matches to KJ603229 (Shigella phage POCJ13, complete genome) position: , mismatch: 0, identity: 1.0 

gactgcacattggtgtgactgcacatcttcacagacggtcccggtatct	CRISPR spacer
gactgcacattggtgtgactgcacatcttcacagacggtcccggtatct	Protospacer
*************************************************

2. spacer 2.1|1435713|49|NZ_CP022086|CRISPRCasFinder matches to NC_029120 (Shigella phage 75/02 Stx, complete genome) position: , mismatch: 0, identity: 1.0 

gactgcacattggtgtgactgcacatcttcacagacggtcccggtatct	CRISPR spacer
gactgcacattggtgtgactgcacatcttcacagacggtcccggtatct	Protospacer
*************************************************

3. spacer 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT matches to MN693005 (Marine virus AFVG_117M50, complete genome) position: , mismatch: 7, identity: 0.781 

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
agttatagattattttgatgagtatgaacaaa	Protospacer
* * * .**************** **** **

4. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP038598 (Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence) position: , mismatch: 7, identity: 0.781 

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

5. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP033827 (Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781 

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

6. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP029125 (Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

7. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_AP019693 (Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence) position: , mismatch: 7, identity: 0.781 

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

8. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP030192 (Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence) position: , mismatch: 7, identity: 0.781 

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

9. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP039274 (Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence) position: , mismatch: 7, identity: 0.781 

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

10. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP016528 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence) position: , mismatch: 7, identity: 0.781 

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

11. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP030227 (Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence) position: , mismatch: 7, identity: 0.781 

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

12. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NC_013090 (Endophytic bacterium LOB-07 plasmid pLK39, complete sequence) position: , mismatch: 7, identity: 0.781 

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

13. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP030009 (Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence) position: , mismatch: 7, identity: 0.781 

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

14. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP011606 (Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence) position: , mismatch: 7, identity: 0.781 

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

15. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP044113 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781 

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

16. spacer 4.25|2798379|33|NZ_CP022086|PILER-CR matches to NZ_CP038598 (Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence) position: , mismatch: 7, identity: 0.788 

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

17. spacer 4.25|2798379|33|NZ_CP022086|PILER-CR matches to NZ_CP033827 (Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.788 

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

18. spacer 4.25|2798379|33|NZ_CP022086|PILER-CR matches to NZ_CP029125 (Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788 

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

19. spacer 4.25|2798379|33|NZ_CP022086|PILER-CR matches to NZ_AP019693 (Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence) position: , mismatch: 7, identity: 0.788 

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

20. spacer 4.25|2798379|33|NZ_CP022086|PILER-CR matches to NZ_CP030192 (Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence) position: , mismatch: 7, identity: 0.788 

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

21. spacer 4.25|2798379|33|NZ_CP022086|PILER-CR matches to NZ_CP039274 (Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence) position: , mismatch: 7, identity: 0.788 

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

22. spacer 4.25|2798379|33|NZ_CP022086|PILER-CR matches to NZ_CP016528 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence) position: , mismatch: 7, identity: 0.788 

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

23. spacer 4.25|2798379|33|NZ_CP022086|PILER-CR matches to NZ_CP030227 (Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence) position: , mismatch: 7, identity: 0.788 

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

24. spacer 4.25|2798379|33|NZ_CP022086|PILER-CR matches to NC_013090 (Endophytic bacterium LOB-07 plasmid pLK39, complete sequence) position: , mismatch: 7, identity: 0.788 

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

25. spacer 4.25|2798379|33|NZ_CP022086|PILER-CR matches to NZ_CP030009 (Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence) position: , mismatch: 7, identity: 0.788 

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

26. spacer 4.25|2798379|33|NZ_CP022086|PILER-CR matches to NZ_CP011606 (Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence) position: , mismatch: 7, identity: 0.788 

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

27. spacer 4.25|2798379|33|NZ_CP022086|PILER-CR matches to NZ_CP044113 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.788 

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

28. spacer 4.3|2797830|32|NZ_CP022086|CRISPRCasFinder,CRT matches to MK016501 (Mycobacterium phage Nebkiss, complete genome) position: , mismatch: 8, identity: 0.75 

atcttcttgttcaggaacgtcagtagaggtgt	CRISPR spacer
atgaatacgttcaggaacgccagtggaggtgt	Protospacer
**   . .***********.****.*******

29. spacer 4.3|2797830|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NC_026590 (Mycobacterium phage Gaia, complete genome) position: , mismatch: 8, identity: 0.75 

atcttcttgttcaggaacgtcagtagaggtgt	CRISPR spacer
atgaatacgttcaggaacgccagtggaggtgt	Protospacer
**   . .***********.****.*******

30. spacer 4.5|2797952|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP010769 (Phaeobacter piscinae strain P13 plasmid pP13_b, complete sequence) position: , mismatch: 8, identity: 0.75 

gcgggcgttaacgcggtgatactgtttgacgg	CRISPR spacer
ttgatcgttaacgcgatgctactgtttgtggg	Protospacer
 .*. **********.** *********  **

31. spacer 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT matches to MK295204 (Shigella phage vB_SdyM_006, complete genome) position: , mismatch: 8, identity: 0.75 

-----attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
tggtcat-----gattattttgatgattatgaaaaac	Protospacer
     **     ************** * *******.

32. spacer 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT matches to MG696114 (Proteus phage phiP4-3, complete genome) position: , mismatch: 8, identity: 0.75 

-----attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
tggtcat-----gattattttgatgattatgaaaaac	Protospacer
     **     ************** * *******.

33. spacer 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP017949 (Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75 

attaaaggattattttgatgagtctgaaaaat-----	CRISPR spacer
attaaaggattatttagatgggtt-----aatcactg	Protospacer
*************** ****.**.     ***

34. spacer 4.10|2798257|32|NZ_CP022086|CRISPRCasFinder,CRT matches to AB452989 (Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds) position: , mismatch: 8, identity: 0.75 

taccggtgtgaattacagcaccaccgccaccc	CRISPR spacer
ggccggtgtgaacaacagcaccaccacgcgcc	Protospacer
 .**********. ***********.*   **

35. spacer 4.12|2798379|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NC_019341 (Pseudomonas syringae plasmid pNCPPB880-40, complete sequence) position: , mismatch: 8, identity: 0.75 

cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
caaattaaaagggccgctaatgcggccctttt	Protospacer
*.*    * *******..**************

36. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP012265 (Cronobacter condimenti 1330 strain LMG 26250 plasmid pCCO1, complete sequence) position: , mismatch: 8, identity: 0.75 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
ctttgcggattttctccagcagcgccagttct	Protospacer
 * .  ** *** ******************.

37. spacer 4.16|2797830|33|NZ_CP022086|PILER-CR matches to MK016501 (Mycobacterium phage Nebkiss, complete genome) position: , mismatch: 8, identity: 0.758 

atcttcttgttcaggaacgtcagtagaggtgtc	CRISPR spacer
atgaatacgttcaggaacgccagtggaggtgtc	Protospacer
**   . .***********.****.********

38. spacer 4.16|2797830|33|NZ_CP022086|PILER-CR matches to NC_026590 (Mycobacterium phage Gaia, complete genome) position: , mismatch: 8, identity: 0.758 

atcttcttgttcaggaacgtcagtagaggtgtc	CRISPR spacer
atgaatacgttcaggaacgccagtggaggtgtc	Protospacer
**   . .***********.****.********

39. spacer 4.21|2798135|33|NZ_CP022086|PILER-CR matches to MN693005 (Marine virus AFVG_117M50, complete genome) position: , mismatch: 8, identity: 0.758 

attaaaggattattttgatgagtctgaaaaatc	CRISPR spacer
agttatagattattttgatgagtatgaacaaag	Protospacer
* * * .**************** **** **

40. spacer 4.26|2798440|33|NZ_CP022086|PILER-CR matches to NZ_CP012265 (Cronobacter condimenti 1330 strain LMG 26250 plasmid pCCO1, complete sequence) position: , mismatch: 8, identity: 0.758 

ataccgggttttgctccagcagcgccagttcct	CRISPR spacer
ctttgcggattttctccagcagcgccagttctt	Protospacer
 * .  ** *** ******************.*

41. spacer 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT matches to AP022649 (Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence) position: , mismatch: 9, identity: 0.719 

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
cgcaaaggattattttgatgaatatgataggg	Protospacer
  .******************.* *** *..

42. spacer 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT matches to KC821606 (Cellulophaga phage phi12:2, complete genome) position: , mismatch: 9, identity: 0.719 

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
ggtaggttattattttgatgagtttaaaaaac	Protospacer
. **..  ***************.*.*****.

43. spacer 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT matches to KT070867 (Bacillus phage PBC2, complete genome) position: , mismatch: 9, identity: 0.719 

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
ttccgactgttcttttgataagtctgaaaaat	Protospacer
 *. .*  .** *******.************

44. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NC_006569 (Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
ggtccgggttctgttccagcagcgccttggcc	Protospacer
.  *******.**.************    **

45. spacer 4.21|2798135|33|NZ_CP022086|PILER-CR matches to MK295204 (Shigella phage vB_SdyM_006, complete genome) position: , mismatch: 9, identity: 0.727 

-----attaaaggattattttgatgagtctgaaaaatc	CRISPR spacer
tggtcat-----gattattttgatgattatgaaaaacg	Protospacer
     **     ************** * *******.

46. spacer 4.21|2798135|33|NZ_CP022086|PILER-CR matches to MG696114 (Proteus phage phiP4-3, complete genome) position: , mismatch: 9, identity: 0.727 

-----attaaaggattattttgatgagtctgaaaaatc	CRISPR spacer
tggtcat-----gattattttgatgattatgaaaaacg	Protospacer
     **     ************** * *******.

47. spacer 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT matches to KC821631 (Cellulophaga phage phi48:1, complete genome) position: , mismatch: 10, identity: 0.688 

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
ggtgggttattattttgatgagtttaaaaaac	Protospacer
. *...  ***************.*.*****.

48. spacer 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT matches to KC821628 (Cellulophaga phage phi18:4, complete genome) position: , mismatch: 10, identity: 0.688 

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
ggtgggttattattttgatgagtttaaaaaac	Protospacer
. *...  ***************.*.*****.

49. spacer 4.8|2798135|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NC_021805 (Cellulophaga phage phi12a:1, complete genome) position: , mismatch: 10, identity: 0.688 

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
ggtgggttattattttgatgagtttaaaaaac	Protospacer
. *...  ***************.*.*****.

50. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

51. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
ccgcggggttctgctccagcaccgccagcagg	Protospacer
 ..* *****.********** ******.

52. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

53. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

54. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

55. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

56. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

57. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

58. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

59. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

60. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

61. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

62. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

63. spacer 4.13|2798440|32|NZ_CP022086|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

64. spacer 4.21|2798135|33|NZ_CP022086|PILER-CR matches to AP022649 (Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence) position: , mismatch: 10, identity: 0.697 

attaaaggattattttgatgagtctgaaaaatc	CRISPR spacer
cgcaaaggattattttgatgaatatgataggga	Protospacer
  .******************.* *** *..

65. spacer 4.4|2797891|32|NZ_CP022086|CRISPRCasFinder,CRT matches to KU160664 (Arthrobacter phage Salgado, complete genome) position: , mismatch: 11, identity: 0.656 

agcattaacccccaccagctcgacgtgtgtgg	CRISPR spacer
tacattcacccccaccagcccgacgccccgtt	Protospacer
 .**** ************.*****. .

66. spacer 4.4|2797891|32|NZ_CP022086|CRISPRCasFinder,CRT matches to MF140418 (Arthrobacter phage LiSara, complete genome) position: , mismatch: 11, identity: 0.656 

agcattaacccccaccagctcgacgtgtgtgg	CRISPR spacer
tacattcacccccaccagcccgacgccccgtt	Protospacer
 .**** ************.*****. .

67. spacer 4.4|2797891|32|NZ_CP022086|CRISPRCasFinder,CRT matches to KU160654 (Arthrobacter phage Laroye, complete genome) position: , mismatch: 11, identity: 0.656 

agcattaacccccaccagctcgacgtgtgtgg	CRISPR spacer
tacattcacccccaccagcccgacgccccgtt	Protospacer
 .**** ************.*****. .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 345172 : 387606 55 Enterobacteria_phage(58.82%) head,tail,portal,capsid,lysis,integrase attL 343450:343465|attR 366601:366616
DBSCAN-SWA_2 652531 : 716579 75 Escherichia_phage(90.54%) terminase,bacteriocin,tail,portal,capsid,lysis,holin NA
DBSCAN-SWA_3 1031492 : 1092962 74 Enterobacteria_phage(42.31%) terminase,head,tail,portal,capsid,integrase,holin,protease attL 1027308:1027322|attR 1048247:1048261
DBSCAN-SWA_4 1382785 : 1449757 77 Shigella_phage(43.48%) terminase,tail,portal,capsid,lysis,integrase,holin attL 1425248:1425265|attR 1453298:1453315
DBSCAN-SWA_5 1577162 : 1623539 60 Enterobacteria_phage(80.85%) terminase,head,tail,tRNA,portal,capsid,integrase,holin,plate attL 1573155:1573171|attR 1624163:1624179
DBSCAN-SWA_6 1735642 : 1829147 107 Enterobacteria_phage(45.59%) terminase,tail,head,tRNA,portal,transposase,capsid,lysis,holin,protease NA
DBSCAN-SWA_7 2127990 : 2137432 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_8 2372620 : 2386443 17 Enterobacteria_phage(66.67%) protease NA
DBSCAN-SWA_9 2747045 : 2754185 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_10 2986010 : 3044573 45 Staphylococcus_phage(18.18%) transposase,integrase,protease,tRNA attL 2986995:2987012|attR 3031933:3031950
DBSCAN-SWA_11 3856883 : 3882602 20 Escherichia_phage(30.0%) transposase,integrase,tRNA attL 3874691:3874750|attR 3879944:3880764
DBSCAN-SWA_12 4443223 : 4502860 31 Enterobacteria_phage(28.57%) integrase,transposase,protease,tRNA attL 4445390:4445404|attR 4504142:4504156
DBSCAN-SWA_13 4542539 : 4601083 60 Pectobacterium_phage(11.11%) transposase,protease NA
DBSCAN-SWA_14 4612354 : 4675065 56 Enterobacteria_phage(25.0%) integrase,transposase,holin,tRNA attL 4604476:4604491|attR 4644727:4644742
DBSCAN-SWA_15 4985241 : 5047567 51 Emiliania_huxleyi_virus(12.5%) transposase,protease,tRNA,plate NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP022087
Click the left colored region to show detailed information

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 67908 : 74862 8 Stx2-converting_phage(57.14%) transposase NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage