CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP019647	Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence	1 crisprs	NA	0	1	3
NZ_CP019648	Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-4, complete sequence	0 crisprs	NA	0	0	0
NZ_CP019649	Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 chromosome, complete genome	2 crisprs	WYL,DinG,cas3,DEDDh,cas14j,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,PD-DExK,RT	2	39	13

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019647_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019647_1

239538-239657

Orphan

Consensus_repeat	Method
TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019647_1

>merge|NZ_CP019647|1|239538-239657|CRISPRCasFinder
TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCAGTGCGCAGCCATCCACCTTTCATGAAAATTACAGTGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA

>NZ_CP019647|1|1|239538-239657|CRISPRCasFinder
TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA	GTGCGCAGCCATCCACCTTTCATGAAAATTACAG
TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019647.1\|WP_001424497.1\|233090_234272_-\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|214900
NZ_CP019647.1\|WP_000581857.1\|234280_234577_-\|toxin-plasmid-maintenance-system-killer-protein	unknown	unknown	gnl\|CDD\|226079
NZ_CP019647.1\|WP_000170638.1\|234626_235097_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019647.1\|WP_000572405.1\|244514_245309_+\|aminoglycoside-O-phosphotransferase-APH(3')-IIa	unknown	unknown	gnl\|CDD\|270699
NZ_CP019647.1\|WP_000121743.1\|240519_240771_+\|plasmid-stabilization-protein	unknown	unknown	gnl\|CDD\|179484
NZ_CP019647.1\|WP_000084745.1\|247995_248388_-\|NimC/NimA-family-protein	unknown	unknown	gnl\|CDD\|227348
NZ_CP019647.1\|WP_000957857.1\|242747_242936_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019647.1\|WP_001067855.1\|238698_239403_-\|IS6-like-element-IS26-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP019647.1\|WP_042634467.1\|238482_238665_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019647.1\|WP_000803860.1\|237994_238162_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019647.1\|WP_001290637.1\|231460_231718_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019647.1\|WP_000128596.1\|250203_251199_-\|Flp-pilus-assembly-complex-ATPase-component	unknown	unknown	gnl\|CDD\|274301
NZ_CP019647.1\|WP_001133498.1\|231782_232211_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019647.1\|WP_000731968.1\|249670_250204_-\|phospholipase-D-family-protein	unknown	unknown	gnl\|CDD\|197267
NZ_CP019647.1\|WP_063102497.1\|246513_246900_+\|bleomycin-binding-protein	unknown	unknown	gnl\|CDD\|319937
NZ_CP019647.1\|WP_001067858.1\|245615_246320_+\|IS6-like-element-IS26-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP019647.1\|WP_000220561.1\|240760_241042_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP019647.1\|WP_000853477.1\|232305_232683_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019647.1\|WP_051124567.1\|241538_242738_-\|IS91-family-transposase	unknown	unknown	gnl\|CDD\|377437
NZ_CP019647.1\|WP_012006566.1\|235531_237949_-\|DUF4165-domain-containing-protein	unknown	unknown	gnl\|CDD\|372704

Protein	Function_ID	Function_description	E-value
NZ_CP019647.1\|WP_001424497.1\|233090_234272_-\|flavin-reductase-family-protein	gnl\|CDD\|214900	smart00903, Flavin_Reduct, Flavin reductase like domain. This entry represents the FMN-binding domain found in NAD(P)H-flavin oxidoreductases (flavin reductases), a class of enzymes capable of producing reduced flavin for bacterial bioluminescence and other biological processes. This domain is also found in various other oxidoreductase and monooxygenase enzymes... This domain consists of a beta-barrel with Greek key topology, and is related to the ferredoxin reductase-like FAD-binding domain. The flavin reductases have a different dimerisation mode than that found in the PNP oxidase-like family, which also carries an FMN-binding domain with a similar topology.	0.00808057
NZ_CP019647.1\|WP_000581857.1\|234280_234577_-\|toxin-plasmid-maintenance-system-killer-protein	gnl\|CDD\|226079	COG3549, HigB, Plasmid maintenance system killer protein [General function prediction only].	7.40891e-14
NZ_CP019647.1\|WP_000572405.1\|244514_245309_+\|aminoglycoside-O-phosphotransferase-APH(3')-IIa	gnl\|CDD\|270699	cd05150, APH, Aminoglycoside 3'-phosphotransferase. APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibiotics. The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	2.432e-109
NZ_CP019647.1\|WP_000121743.1\|240519_240771_+\|plasmid-stabilization-protein	gnl\|CDD\|179484	PRK02854, PRK02854, primosomal protein DnaT.	2.40816e-08
NZ_CP019647.1\|WP_000084745.1\|247995_248388_-\|NimC/NimA-family-protein	gnl\|CDD\|227348	COG5015, COG5015, Uncharacterized conserved protein [Function unknown].	1.3551e-35
NZ_CP019647.1\|WP_001067855.1\|238698_239403_-\|IS6-like-element-IS26-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.30323e-69
NZ_CP019647.1\|WP_001067858.1\|245615_246320_+\|IS6-like-element-IS26-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.07441e-69
NZ_CP019647.1\|WP_000128596.1\|250203_251199_-\|Flp-pilus-assembly-complex-ATPase-component	gnl\|CDD\|274301	TIGR02788, conjugal_transfer_protein, P-type DNA transfer ATPase VirB11. The VirB11 protein is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer. VirB11 is believed to be an ATPase. VirB11 is a homolog of the P-like conjugation system TrbB protein and the Flp pilus sytem protein TadA.	1.03072e-75
NZ_CP019647.1\|WP_000731968.1\|249670_250204_-\|phospholipase-D-family-protein	gnl\|CDD\|197267	cd09170, PLDc_Nuc, Catalytic domain of EDTA-resistant nuclease Nuc from Salmonella typhimurium and similar proteins. Catalytic domain of an EDTA-resistant nuclease Nuc from Salmonella typhimurium and similar proteins. Nuc is an endonuclease cleaving both single- and double-stranded DNA. It is the smallest known member of the phospholipase D (PLD, EC 3.1.4.4) superfamily that includes a diverse group of proteins with various catalytic functions. Most members of this superfamily have two copies of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) in a single polypeptide chain and both are required for catalytic activity. However, Nuc only has one copy of the HKD motif per subunit but form a functionally active homodimer (it is most likely also active in solution as a multimeric protein), which has a single active site at the dimer interface containing the HKD motifs from both subunits. Due to the lack of a distinct domain for DNA binding, Nuc cuts DNA non-specifically. It utilizes a two-step mechanism to cleave phosphodiester bonds: Upon substrate binding, the bond is first attacked by a histidine residue from one HKD motif to form a covalent phosphohistidine intermediate, which is then hydrolyzed by water with the aid of a second histidine residue from the other HKD motif in the opposite subunit.	1.37302e-76
NZ_CP019647.1\|WP_063102497.1\|246513_246900_+\|bleomycin-binding-protein	gnl\|CDD\|319937	cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins. BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping.	1.71835e-34
NZ_CP019647.1\|WP_000220561.1\|240760_241042_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	2.37215e-20
NZ_CP019647.1\|WP_051124567.1\|241538_242738_-\|IS91-family-transposase	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	2.38131e-69
NZ_CP019647.1\|WP_012006566.1\|235531_237949_-\|DUF4165-domain-containing-protein	gnl\|CDD\|372704	pfam13750, Big_3_3, Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.	1.02967e-38

>NZ_CP019647.1|WP_001067855.1|238698_239403_-|IS6-like-element-IS26-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>NZ_CP019647.1|WP_042634467.1|238482_238665_+|hypothetical-protein
MYKLVSPRELTEIITGLLLKPELLGELDSPEKHRMFMADLGRVVAEHCGGLVNSVALLQS
>NZ_CP019647.1|WP_000803860.1|237994_238162_-|hypothetical-protein
MKPMLKKDFFSAIENLLKAGFQPRFYTVNSGRIGLITFTDKNGTKQVPPGRKEKH
>NZ_CP019647.1|WP_012006566.1|235531_237949_-|DUF4165-domain-containing-protein
MGNLIRRQPMKIKLALLIAFAGFSAGASAEIAEFSFKDTLNVKKTVSPASVWINPVTSFDVAVISGLDRYITLSLLKSDGSLIWSTKSSLVTVDDRTTSSTGFDYYGKTLTVPAMGEDSFTLREVITDLQGKEVSRQDYPLAIDRTPPATGTISYTRNGWNFGSEAIFTSVPAGMQYASVQALVFNGLSDKGSGLANAEYFITDAAGVERKKPAEINTVEGSVTVQVADASSNALAPENRSEYKVGIYLYDKAGNRIELSRRSVIDRVKPDDIIQVQDATTGSWVTYQSGMTVFQNPISVRVLRKKSDFTAVNGSKYGWADSNFQTSDSTYNIYTFKYIYPNVGDTYHEFQTLAGGVRRIHHNSLNFTPAPAMEIAPKIVAKEMYRSDTSEWLTQASISVKTATISRIKVTAEPRPYVQKFRTVKNAAWFCTIPIGQSSCEMTVNFNYTSDKGFEYLHLYSGKDGDSIFDALAGNFTVIWDNNPPVVNVAQVNKASKTITMTATDNDRVNAWNISYWDTKVFEATLKNARGEPFTLKPVTVSESDYKTKNATFSYAGLPDGDYTVVSVSATDLVGNTGTKTLNAPLKIDSTLPVIAFSFNGADAEGKLVKGLENLRISVTDASGDASLTSLQLAGGPNSEKVTLAFTPLSKDVFIPEYPRIFPNTDESGQMYHLEALAIDESGNRTTKTLNFTYQPANLIMLDNLKTLATAVALKATDNTPLAIIRTSVLRRQDGSIITGQLNGTLTVQKNAQFGVTVAGVTVQPGETKSLSLDLGNGEERTYPVTPAVSGQSGTATFAIEFPQT
>NZ_CP019647.1|WP_000170638.1|234626_235097_-|hypothetical-protein
MTKYYDRSGIEISSAKIRCVDSVKGTAEYTFRILCDKCNGRGERKHFYRSRCMACKATGYSLETTRTAYTLNALYRINAQAARKVSASLQNERLRTENAHNSAFNAWCRSHQKMVDAITQQSSSNNFLESLKSSLTHQRQLSDKQLAVAARILGIH
>NZ_CP019647.1|WP_000581857.1|234280_234577_-|toxin-plasmid-maintenance-system-killer-protein
MIHSFKDRRLEKFFRNGKTTAGIPSEIINAILCRLETLDNVQSERELLSNSLRYERLRMTSNRYSSIRVNSKYRLFFEWNDGAHNVHLSAHDYKSLIH
>NZ_CP019647.1|WP_001424497.1|233090_234272_-|flavin-reductase-family-protein
MKLFSISSRDTSMDAMFYIQASTKQQASYIFSTLSPKPTANCQLTDLQNETVVPSISPISLSLNPWSINSQSRTRELSMATHGLNLICAVTDEHTRQIVDFCDNLGQQLKDPDDKSAWVKLINSECALLNSPRLYPVLLEPETPAQFEIFVPAPEDGDHDTVIASVVEECFGDECRYRATDKAFAMSEKPIIRLEAHFNDKREKVLELTFSSFNLSLSASVYEHQLRQILLLCEDFGVRLQGRAGASCHINMRSAYRRLAHVGTGSRPGDGSDVRGYTSSKEQKDVKGLLDKSTRGSELVPARHGQQFNGVLVNATPAPATTGFIYLSHDFPEGQFMMTAEVLHVGITPGGIYYIETLDGYRFIVTAFEKGLMNGLREFLAVNEDYFKYYRWS
>NZ_CP019647.1|WP_000853477.1|232305_232683_-|hypothetical-protein
MKTLDVISTQLNFNNLLNQAGYNLSEIVVKRYSAAPAFNEGHWLFIAEQDNRYIEVVSLLSKASESGEQHVDIFINMFEDPIDDIISRNIEPKTFATLYKYIERIPFTPDVKKEFLSSIETINFS
>NZ_CP019647.1|WP_001133498.1|231782_232211_-|hypothetical-protein
MPNNTEVISCDLFSILSSLNFSVEDITGLTPAKFRKGAFLHAKISASQATRAADISLQLLTDRVSGEMNYVIVIGRHEGLLQSEAIDPNADKQYRENRHSRHFIPVTDANTKALKKTCKVMKTYIKEQAFKPNTWGHNFIKG
>NZ_CP019647.1|WP_001290637.1|231460_231718_-|hypothetical-protein
MSEKHFIVKIQNRNGDHEKSYVRILVSDCEKNACQTALISECAGEVEQLSFEDGGVYDYNGENHYSVRSCVEVAPEDVATLQRYL
>NZ_CP019647.1|WP_000121743.1|240519_240771_+|plasmid-stabilization-protein
MSYQILTTTAASITDLKKNPMGTVAEGEGDAVAILNRNEPAFYCVPPKLYAYYRELAEDAELNAVADERMKNPEIVKVNLDDL
>NZ_CP019647.1|WP_000220561.1|240760_241042_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MTYELAFDRRALKEWQKLGHTIREQFKKKLAERLENPRVPAARLHGHADRYKIKLRASGYRLVYQVIDEKVVLLVIAVGRRESSEVYQIADMR
>NZ_CP019647.1|WP_051124567.1|241538_242738_-|IS91-family-transposase
MLSGFTPRPLKRLFTANQCWTSFLDAGGLRDIEVEAVTKMLACGTRILGVKEFGCDNPDCQHVKYLTNSCGSRACPSCGKKATDLWTATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGLEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAWSEGMAMPESLSHITTESQWRSLVLKSGGKYWHVYMSKKTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLSFRYLDHKTGETATETLTQRELVARMKQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGCRMVYRRAIAGLNVSGLKKNARDISLLRYMPA
>NZ_CP019647.1|WP_000957857.1|242747_242936_-|hypothetical-protein
MLTRKSIDTVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVTTSILKRRGDTAALTLLQDTGV
>NZ_CP019647.1|WP_000572405.1|244514_245309_+|aminoglycoside-O-phosphotransferase-APH(3')-IIa
MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF
>NZ_CP019647.1|WP_001067858.1|245615_246320_+|IS6-like-element-IS26-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>NZ_CP019647.1|WP_063102497.1|246513_246900_+|bleomycin-binding-protein
MPALPVGDIKKSIGFYCDKLGFTLVHHEDGFAVLMCNEVRIHLWEASDEGWRSRSNDSPVCTGAESFIAGTASCRIEVEGIDELYQHIKPLGILHPNTSLKDQWWDERDFAVIDPDNNLISFFQQIKS
>NZ_CP019647.1|WP_000084745.1|247995_248388_-|NimC/NimA-family-protein
MSQVVDFLNEAKTFYFATVEGDQPRVRPFNAAMERNGKVYLGTTNQKKVYQQLLANSKVEVSGMAKGKWIRLTGEAVIDDTVEAREAMLEANPPLRDWYSADDGKFTVFYLKNMQAVLYSFTGDPEILDN
>NZ_CP019647.1|WP_000731968.1|249670_250204_-|phospholipase-D-family-protein
MKKLATWLLAAAFTTAALPAFAVEPSVQVGYSPEGSARVLVLSAIDSAKTSIRMMAYSFTAPDIMKALVAAKKRGVDVKIVIDERGNTGRASIAAMNYIANSGIPLRTDSNFPIQHDKVIIVDNVTVETGSFNFTKAAETKNSENAVVIWNMPKLAESFLEHWQDRWNQGRDYRSSY
>NZ_CP019647.1|WP_000128596.1|250203_251199_-|Flp-pilus-assembly-complex-ATPase-component
MTDAAFYQLGPLREYLEDPTVFEIRINCFQEVICDTFSGRRVVQNAAITADFIRNLAKSLVSSNKLTMQAINDVILPGGIRGVICLPPAVIDGTTAVAFRKDLAADKNLEQLTSEGIFSDCRKITGSKQSLTDDDFFLKELHSSEKWPAFLQTAVEKKRTIVICGETGSGKTVLTRALLKSLHKDERVIILEDVHEVTVDHVVEAVYMMYGDAGKIGRVSATDALRACMRLTPGRIIMTELRDDAAWDYLKALNTGHPGGVMSTHANSARDAFNRIGLLIKATPIGRMLDMSDIMRMLYSTIDVVVHMEKRKIKEIYFDPEYKMQCVNGSL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_KX518744	Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence	63874-63907	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP041286	Escherichia coli strain 54 plasmid p54-tetX, complete sequence	64169-64202	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_KU321583	Escherichia coli strain E80 plasmid pE80, complete sequence	38215-38248	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_KT990220	Escherichia coli strain 42-2 plasmid p42-2, complete sequence	37006-37039	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP010164	Escherichia coli strain H2 plasmid A, complete sequence	20751-20784	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP019647	Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence	239581-239614	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP022964	Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence	30266-30299	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP024467	Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence	17630-17663	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	16611-16644	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	53074-53107	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP019284	Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence	32601-32634	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP047093	Salmonella sp. S13 plasmid pS13-4, complete sequence	1762-1795	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP051432	Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence	23725-23758	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP046002	Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence	35337-35370	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP045188	Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence	26770-26803	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	41390-41423	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	60962-60995	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP032386	Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence	39391-39424	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP032389	Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence	9889-9922	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_LT904873	Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2	5696-5729	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_KT754163	Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence	12265-12298	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP033383	Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence	7366-7399	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP020836	Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence	20407-20440	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP038140	Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence	93494-93527	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP043216	Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence	32193-32226	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP042617	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence	25537-25570	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP031361	Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence	27033-27066	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP044153	Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence	25749-25782	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP040929	Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence	2187-2220	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP033386	Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence	34721-34754	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP041177	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence	4942-4975	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP034761	Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence	47580-47613	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP050707	Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence	14631-14664	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP047339	Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence	28949-28982	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NC_010860	Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence	32623-32656	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP022453	Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence	5893-5926	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP024153	Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence	53536-53569	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP030208	Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence	39815-39848	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP005994	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence	30028-30061	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP032450	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence	29110-29143	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP010155	Escherichia coli strain D9 plasmid C, complete genome	14497-14530	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP050174	Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence	58667-58700	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP029061	Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence	10786-10819	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP042589	Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence	29459-29492	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP025677	Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence	79278-79311	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP041453	Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence	54169-54202	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MN816373	Escherichia coli strain A127 plasmid pA127-X1, complete sequence	29459-29492	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP052879	Escherichia coli strain C21 plasmid pC21-2, complete sequence	61147-61180	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP033379	Escherichia coli strain L73 plasmid pL73-2, complete sequence	99797-99830	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	88012-88045	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP050724	Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence	41949-41982	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP047573	Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence	53619-53652	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NC_019106	Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence	32551-32584	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP010127	Escherichia coli strain C8 plasmid B, complete genome	33248-33281	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	85971-86004	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP022072	Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence	18650-18683	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	20398-20431	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	147056-147089	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP045998	Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence	35339-35372	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP032394	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence	32800-32833	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NC_019256	Shigella sp. LN126 plasmid pLN126_33, complete sequence	2112-2145	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MH884649	Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence	16816-16849	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MH884651	Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence	68260-68293	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MH229869	Escherichia coli plasmid pKANJ7, complete sequence	90-123	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP050713	Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence	33434-33467	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP041439	Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence	96892-96925	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP041443	Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence	63333-63366	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MK461931	Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence	238663-238696	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MK656937	Escherichia coli strain T3 plasmid pT3, complete sequence	37880-37913	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MK731977	Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence	22155-22188	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MK673546	Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence	28203-28236	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP032447	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence	18380-18413	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	118004-118037	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	151970-152003	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MH287085	Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence	243053-243086	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MH287084	Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence	241163-241196	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP025558	Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence	11939-11972	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	90443-90476	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MT219826	Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence	43726-43759	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MG904998	Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence	48918-48951	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MG197491	Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence	33352-33385	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MG197498	Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence	58347-58380	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MG197503	Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence	61256-61289	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MG197495	Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence	61256-61289	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MF589339	Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence	27964-27997	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MG197502	Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence	61256-61289	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MT219818	Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence	43736-43769	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MT219820	Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence	80789-80822	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MT219822	Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence	38970-39003	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MT219823	Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence	73817-73850	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NC_023323	Escherichia coli ACN001 plasmid pACN001-A, complete sequence	18865-18898	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MF554637	uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence	14942-14975	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP016575	Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence	296-329	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP020060	Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence	30572-30605	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP032994	Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence	10049-10082	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MN783746	Escherichia coli plasmid pIncX1_p1, complete sequence	5290-5323	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_KX815983	Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence	40397-40430	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_KU254580	Escherichia coli strain YD786 plasmid pYD786-3, complete sequence	25507-25540	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP042633	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence	38916-38949	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP032392	Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence	67739-67772	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP019272	Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence	35028-35061	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP053728	Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence	69102-69135	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP037995	Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281	7255-7288	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP053740	Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence	9971-10004	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP016580	Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence	23703-23736	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP046001	Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence	49989-50022	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP021103	Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence	56470-56503	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP029182	Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence	2302-2335	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MN086778	Escherichia coli plasmid p16EC-IncN, complete sequence	90173-90206	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP053047	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence	9874-9907	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP014974	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence	295-328	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP032397	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence	220331-220364	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP035774	Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence	12757-12790	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP044182	Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence	25543-25576	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP042608	Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence	7171-7204	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MK461930	Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence	45261-45294	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NC_019046	Escherichia coli plasmid pNMEC31_31, complete sequence	31361-31394	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP047460	Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence	89191-89224	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP047466	Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence	30748-30781	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP035315	Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence	28493-28526	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP050748	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence	5878-5911	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NC_024961	Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence	905-938	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NC_021842	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence	4017-4050	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_LT985261	Escherichia coli strain 657 plasmid RCS50_p, complete sequence	42585-42618	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_AP019678	Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence	49115-49148	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP009074	Escherichia coli ATCC 25922 plasmid unnamed, complete sequence	21137-21170	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP010168	Escherichia coli strain H3 plasmid A, complete genome	25682-25715	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NC_010378	Escherichia coli plasmid pOLA52, complete sequence	34562-34595	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	CP016512	Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence	23704-23737	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP016529	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence	23704-23737	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP016518	Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence	23705-23738	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP032988	Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence	50710-50743	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP017633	Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence	23885-23918	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP012922	Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence	23704-23737	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP033093	Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence	19532-19565	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP012926	Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence	37369-37402	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP023360	Escherichia coli strain 1943 plasmid p54, complete sequence	52726-52759	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	CP043734	Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence	37807-37840	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP039600	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence	32872-32905	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP030283	Escherichia coli strain E308 plasmid pLKSZ02, complete sequence	49947-49980	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NC_011204	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence	70648-70681	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NC_017624	Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence	23689-23722	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP050710	Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence	15569-15602	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP024290	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence	33653-33686	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP048777	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence	1446-1479	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP041631	Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence	4799-4832	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP050773	Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence	30707-30740	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP041444	Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence	38005-38038	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP019180	Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence	24566-24599	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP050765	Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence	6593-6626	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NC_010422	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence	59434-59467	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP050759	Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence	5734-5767	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_AP022652	Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence	295-328	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP024136	Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence	79478-79511	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_LT985315	Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence	47119-47152	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MN436006	Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence	27492-27525	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MN436007	Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence	27131-27164	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	44664-44697	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP045839	Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence	48284-48317	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP032381	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence	12454-12487	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MG825381	Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence	43402-43435	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MT197111	Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence	12897-12930	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MT219817	Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence	59284-59317	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MT219819	Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence	118931-118964	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	MT219821	Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence	3734-3767	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MG288677	Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence	29004-29037	0	1.0
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP030195	Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence	159-192	1	0.971
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP033353	Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence	78450-78483	2	0.941
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP050780	Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence	203947-203980	2	0.941
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP022061	Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence	1711-1744	2	0.941
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	CP048927	Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence	45611-45644	2	0.941
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP029841	Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence	98434-98467	2	0.941
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP028313	Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence	41569-41602	2	0.941
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP018662	Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence	41992-42025	2	0.941
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	CP049987	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence	41386-41419	2	0.941
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	CP049982	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence	42740-42773	2	0.941
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NC_010421	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence	27662-27695	2	0.941
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_MK625201	Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence	41824-41857	2	0.941
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP023476	Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence	33473-33506	2	0.941
NZ_CP019647_1	1.1\|239581\|34\|NZ_CP019647\|CRISPRCasFinder	239581-239614	34	NZ_CP044292	Escherichia coli strain P43A plasmid pP43A-1, complete sequence	44259-44292	4	0.882

1. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_KX518744 (Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

2. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP041286 (Escherichia coli strain 54 plasmid p54-tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

3. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_KU321583 (Escherichia coli strain E80 plasmid pE80, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

4. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_KT990220 (Escherichia coli strain 42-2 plasmid p42-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

5. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP010164 (Escherichia coli strain H2 plasmid A, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

6. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP019647 (Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

7. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP022964 (Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

8. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP024467 (Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

9. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

10. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

11. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP019284 (Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

12. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP047093 (Salmonella sp. S13 plasmid pS13-4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

13. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP051432 (Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

14. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP046002 (Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

15. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP045188 (Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

16. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

17. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

18. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP032386 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

19. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP032389 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

20. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_LT904873 (Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

21. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_KT754163 (Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

22. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP033383 (Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

23. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP020836 (Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

24. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

25. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP043216 (Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

26. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP042617 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

27. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP031361 (Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

28. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP044153 (Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

29. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP040929 (Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

30. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP033386 (Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

31. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP041177 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

32. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP034761 (Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

33. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP050707 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

34. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP047339 (Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

35. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NC_010860 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

36. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP022453 (Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

37. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP024153 (Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

38. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP030208 (Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

39. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP005994 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

40. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP032450 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

41. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP010155 (Escherichia coli strain D9 plasmid C, complete genome) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

42. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP050174 (Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

43. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP029061 (Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

44. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP042589 (Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

45. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP025677 (Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

46. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP041453 (Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

47. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MN816373 (Escherichia coli strain A127 plasmid pA127-X1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

48. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP052879 (Escherichia coli strain C21 plasmid pC21-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

49. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP033379 (Escherichia coli strain L73 plasmid pL73-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

50. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

51. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP050724 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

52. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP047573 (Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

53. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NC_019106 (Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

54. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP010127 (Escherichia coli strain C8 plasmid B, complete genome) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

55. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

56. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP022072 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

57. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

58. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

59. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP045998 (Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

60. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP032394 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

61. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NC_019256 (Shigella sp. LN126 plasmid pLN126_33, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

62. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MH884649 (Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

63. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MH884651 (Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

64. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MH229869 (Escherichia coli plasmid pKANJ7, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

65. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP050713 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

66. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP041439 (Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

67. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP041443 (Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

68. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MK461931 (Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

69. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MK656937 (Escherichia coli strain T3 plasmid pT3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

70. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MK731977 (Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

71. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MK673546 (Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

72. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP032447 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

73. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

74. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

75. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MH287085 (Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

76. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MH287084 (Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

77. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP025558 (Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

78. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

79. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MT219826 (Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

80. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MG904998 (Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

81. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MG197491 (Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

82. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MG197498 (Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

83. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MG197503 (Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

84. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MG197495 (Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

85. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MF589339 (Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

86. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MG197502 (Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

87. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MT219818 (Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

88. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MT219820 (Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

89. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MT219822 (Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

90. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MT219823 (Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

91. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NC_023323 (Escherichia coli ACN001 plasmid pACN001-A, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

92. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MF554637 (uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

93. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP016575 (Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

94. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP020060 (Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

95. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP032994 (Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

96. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MN783746 (Escherichia coli plasmid pIncX1_p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

97. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_KX815983 (Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

98. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_KU254580 (Escherichia coli strain YD786 plasmid pYD786-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

99. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP042633 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

100. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP032392 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

101. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP019272 (Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

102. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP053728 (Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

103. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP037995 (Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

104. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP053740 (Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

105. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP016580 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

106. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP046001 (Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

107. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP021103 (Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

108. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP029182 (Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

109. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MN086778 (Escherichia coli plasmid p16EC-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

110. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP053047 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

111. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP014974 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

112. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP032397 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

113. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP035774 (Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

114. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP044182 (Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

115. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP042608 (Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

116. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MK461930 (Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

117. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NC_019046 (Escherichia coli plasmid pNMEC31_31, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

118. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP047460 (Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

119. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP047466 (Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

120. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP035315 (Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

121. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP050748 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

122. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NC_024961 (Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

123. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NC_021842 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

124. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_LT985261 (Escherichia coli strain 657 plasmid RCS50_p, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

125. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_AP019678 (Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

126. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP009074 (Escherichia coli ATCC 25922 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

127. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP010168 (Escherichia coli strain H3 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

128. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NC_010378 (Escherichia coli plasmid pOLA52, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

129. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to CP016512 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

130. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP016529 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

131. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP016518 (Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

132. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP032988 (Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

133. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP017633 (Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

134. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP012922 (Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

135. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP033093 (Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

136. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP012926 (Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

137. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP023360 (Escherichia coli strain 1943 plasmid p54, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

138. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to CP043734 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

139. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP039600 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

140. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP030283 (Escherichia coli strain E308 plasmid pLKSZ02, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

141. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NC_011204 (Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

142. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NC_017624 (Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

143. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP050710 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

144. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP024290 (Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

145. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP048777 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

146. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP041631 (Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

147. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP050773 (Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

148. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP041444 (Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

149. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP019180 (Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

150. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP050765 (Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

151. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NC_010422 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

152. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP050759 (Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

153. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_AP022652 (Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

154. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP024136 (Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

155. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_LT985315 (Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

156. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MN436006 (Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

157. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MN436007 (Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

158. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

159. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP045839 (Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

160. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP032381 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

161. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MG825381 (Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

162. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MT197111 (Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

163. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MT219817 (Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

164. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MT219819 (Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

165. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to MT219821 (Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

166. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MG288677 (Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

167. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP030195 (Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence) position: , mismatch: 1, identity: 0.971

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaatcacag	Protospacer
*****************************.****

168. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP033353 (Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gcccgcagccatccacctttcatgaaaattacag	Protospacer
*. *******************************

169. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP050780 (Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gcccgcagccatccacctttcatgaaaattacag	Protospacer
*. *******************************

170. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP022061 (Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

171. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to CP048927 (Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

172. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP029841 (Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

173. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP028313 (Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

174. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP018662 (Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

175. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to CP049987 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

176. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to CP049982 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

177. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NC_010421 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

178. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_MK625201 (Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

179. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP023476 (Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

180. spacer 1.1|239581|34|NZ_CP019647|CRISPRCasFinder matches to NZ_CP044292 (Escherichia coli strain P43A plasmid pP43A-1, complete sequence) position: , mismatch: 4, identity: 0.882

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
tcgaacagccatccacctttcatgaaaattacag	Protospacer
 .* .*****************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

51650 : 97131

Escherichia_phage(40.0%)

integrase,protease,transposase

attL 44028:44042|attR 98398:98412

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
44028:44042	attL	NA	NA	NA	NA
WP_085948178.1\|51650_52864_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_042634306.1\|53154_54111_+	hypothetical protein	NA	NA	NA	NA
WP_001004201.1\|54374_54650_+	hypothetical protein	NA	NA	NA	NA
WP_000578892.1\|54694_55285_+	hypothetical protein	NA	NA	NA	NA
WP_001371933.1\|55292_55550_+	hypothetical protein	NA	NA	NA	NA
WP_042634305.1\|55623_56160_+	hypothetical protein	NA	NA	NA	NA
WP_000549069.1\|56176_56623_+	hypothetical protein	NA	NA	NA	NA
WP_012006603.1\|56695_57676_+	DNA replication protein	NA	NA	NA	NA
WP_001198594.1\|57685_58591_+	hypothetical protein	NA	NA	NA	NA
WP_001805195.1\|58526_58871_+	hypothetical protein	NA	NA	NA	NA
WP_000795947.1\|58892_60068_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_001285422.1\|60238_60451_+	hypothetical protein	NA	NA	NA	NA
WP_001232449.1\|60811_61894_+	hypothetical protein	NA	NA	NA	NA
WP_001284313.1\|62060_63560_-	kinase	NA	NA	NA	NA
WP_000081622.1\|63585_65223_-	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_001253653.1\|65222_66263_-	VWA domain-containing protein	NA	NA	NA	NA
WP_001253658.1\|66348_66987_-	VWA domain-containing protein	NA	NA	NA	NA
WP_000116681.1\|66986_67628_-	TerD family protein	NA	NA	NA	NA
WP_001388628.1\|67650_68289_-	VWA domain-containing protein	NA	NA	NA	NA
WP_001176767.1\|68751_69219_-	tellurium resistance protein TerW	NA	NA	NA	NA
WP_000506887.1\|69236_70445_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_000797366.1\|70455_71412_-	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_042634304.1\|71411_72491_-\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	2.8e-38	34.1
WP_001040059.1\|72492_73266_-	hypothetical protein	NA	NA	NA	NA
WP_001285478.1\|73258_74401_-	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	1.7e-30	35.4
WP_001035162.1\|74410_75469_-	hypothetical protein	NA	NA	NA	NA
WP_042634303.1\|75792_76374_+	tellurium resistance protein TerZ	K4JRX3	Caulobacter_phage	6.3e-13	30.0
WP_088631489.1\|76373_77531_+	tellurium resistance protein TerA	NA	NA	NA	NA
WP_000007448.1\|77553_78009_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_000255079.1\|78031_79072_+	tellurium resistance membrane protein TerC	K7QKE8	Escherichia_phage	2.2e-77	48.0
WP_000116677.1\|79120_79699_+	tellurium resistance membrane protein TerD	A0A2P1N0L4	Streptomyces_phage	3.3e-06	40.0
WP_000301242.1\|79766_80342_+	TerD family protein	K4JRX3	Caulobacter_phage	8.7e-31	41.6
WP_001053338.1\|80770_82012_+	tellurium resistance protein TerF	NA	NA	NA	NA
WP_000077926.1\|82574_82856_-	hypothetical protein	NA	NA	NA	NA
WP_000398480.1\|82905_83097_-	hypothetical protein	NA	NA	NA	NA
WP_001371937.1\|83188_83560_-	hypothetical protein	NA	NA	NA	NA
WP_000341066.1\|83902_84295_+	hypothetical protein	NA	NA	NA	NA
WP_024136327.1\|84898_85192_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000088046.1\|85196_86522_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_000134171.1\|86582_86789_+	hypothetical protein	NA	NA	NA	NA
WP_000985910.1\|86890_87181_+	hypothetical protein	NA	NA	NA	NA
WP_000480968.1\|87222_88059_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082319.1\|88058_88862_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_001067858.1\|89050_89755_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001351729.1\|90188_90581_+	cysteine hydrolase	NA	NA	NA	NA
WP_000058717.1\|90718_91603_+	EamA family transporter	NA	NA	NA	NA
WP_000804064.1\|91634_92834_-	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
WP_000164043.1\|92939_93590_+	tetracycline resistance transcriptional repressor TetR(A)	NA	NA	NA	NA
WP_000844627.1\|93621_93864_-\|transposase	transposase	NA	NA	NA	NA
WP_000027057.1\|95324_96185_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001067858.1\|96426_97131_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
98398:98412	attR	NA	NA	NA	NA

DBSCAN-SWA_2

100272 : 125176

Escherichia_phage(55.56%)

integrase,transposase

attL 107961:108020|attR 118141:118798

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067858.1\|100272_100977_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_042634516.1\|103939_104131_-	Rop family plasmid primer RNA-binding protein	NA	NA	NA	NA
WP_001067855.1\|104455_105160_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000034420.1\|105297_106089_-	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
WP_001354008.1\|106557_106803_-	hypothetical protein	NA	NA	NA	NA
WP_000612791.1\|106840_107704_-	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
WP_077876817.1\|107849_108047_-	hypothetical protein	NA	NA	NA	NA
107961:108020	attL	NA	NA	NA	NA
WP_001067855.1\|108023_108728_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_085948178.1\|110163_111377_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_001206316.1\|111708_112500_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000095725.1\|112592_113852_-	chloramphenicol efflux MFS transporter CmlA1	S4TR35	Salmonella_phage	4.8e-26	31.7
WP_001261740.1\|114113_114905_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000050382.1\|114962_115571_-	HAD-IB family hydrolase	NA	NA	NA	NA
WP_001456218.1\|115666_116509_-	alpha/beta fold putative hydrolase EstX	NA	NA	NA	NA
WP_088631490.1\|116675_117542_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.3e-38	39.4
WP_001067855.1\|117432_118137_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000090707.1\|119178_120021_+\|transposase	transposase	NA	NA	NA	NA
118141:118798	attR	NA	NA	NA	NA
WP_000351437.1\|120007_122131_+\|transposase	transposase	NA	NA	NA	NA
WP_001049180.1\|122130_123579_+	ATP-binding protein	NA	NA	NA	NA
WP_001324699.1\|123619_125176_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

212514 : 253918

Escherichia_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001300563.1\|212514_213627_+\|transposase	IS4-like element IS421 family transposase	NA	NA	NA	NA
WP_000783758.1\|213821_213980_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_087522250.1\|214078_215448_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.3e-112	99.5
WP_042634503.1\|215780_216386_-	hypothetical protein	NA	NA	NA	NA
WP_000703843.1\|216601_216883_-	hypothetical protein	NA	NA	NA	NA
WP_001424621.1\|217257_217569_-	hypothetical protein	NA	NA	NA	NA
WP_000814954.1\|217791_217992_-	hypothetical protein	NA	NA	NA	NA
WP_000551490.1\|218031_218256_-	hypothetical protein	NA	NA	NA	NA
WP_088631492.1\|218310_218514_-	hypothetical protein	NA	NA	NA	NA
WP_001424592.1\|219066_219558_-	DUF3085 domain-containing protein	NA	NA	NA	NA
WP_001165367.1\|219562_219874_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_001133831.1\|220389_220710_-	hypothetical protein	NA	NA	NA	NA
WP_000276410.1\|220889_221117_-	hypothetical protein	NA	NA	NA	NA
WP_077248242.1\|221344_221956_-	hypothetical protein	NA	NA	NA	NA
WP_000241454.1\|222067_222601_-	HNH endonuclease	E7EKU5	Edwardsiella_phage	2.6e-45	65.2
WP_000159618.1\|222661_222850_-	hypothetical protein	NA	NA	NA	NA
WP_000172889.1\|222846_223158_-	hypothetical protein	NA	NA	NA	NA
WP_001180999.1\|223220_223460_-	hypothetical protein	NA	NA	NA	NA
WP_000469466.1\|223709_226094_-	phosphoadenosine phosphosulfate reductase family protein	NA	NA	NA	NA
WP_000182314.1\|226266_226716_-	hypothetical protein	NA	NA	NA	NA
WP_000774870.1\|226767_227559_-	hypothetical protein	NA	NA	NA	NA
WP_042634392.1\|227785_228043_-	hypothetical protein	NA	NA	NA	NA
WP_000556022.1\|228108_228435_-	hypothetical protein	NA	NA	NA	NA
WP_000104323.1\|229277_230528_-	site-specific DNA-methyltransferase	NA	NA	NA	NA
WP_000833773.1\|230696_231305_-	hypothetical protein	K4JV11	Caulobacter_phage	5.4e-23	39.8
WP_001290637.1\|231460_231718_-	hypothetical protein	NA	NA	NA	NA
WP_001133498.1\|231782_232211_-	hypothetical protein	NA	NA	NA	NA
WP_000853477.1\|232305_232683_-	hypothetical protein	NA	NA	NA	NA
WP_001424497.1\|233090_234272_-	flavin reductase family protein	NA	NA	NA	NA
WP_000581857.1\|234280_234577_-	toxin-plasmid maintenance system killer protein	A0A222YWE2	Escherichia_phage	3.2e-05	35.1
WP_000170638.1\|234626_235097_-	hypothetical protein	NA	NA	NA	NA
WP_012006566.1\|235531_237949_-	DUF4165 domain-containing protein	NA	NA	NA	NA
WP_000803860.1\|237994_238162_-	hypothetical protein	NA	NA	NA	NA
WP_042634467.1\|238482_238665_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|238698_239403_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000121743.1\|240519_240771_+	plasmid stabilization protein	NA	NA	NA	NA
WP_000220561.1\|240760_241042_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	2.9e-24	62.4
WP_051124567.1\|241538_242738_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000957857.1\|242747_242936_-	hypothetical protein	NA	NA	NA	NA
WP_000572405.1\|244514_245309_+	aminoglycoside O-phosphotransferase APH(3')-IIa	Q75ZG1	Hepacivirus	9.5e-153	100.0
WP_001067858.1\|245615_246320_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_063102497.1\|246513_246900_+	bleomycin binding protein	NA	NA	NA	NA
WP_000084745.1\|247995_248388_-	NimC/NimA family protein	NA	NA	NA	NA
WP_000731968.1\|249670_250204_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	2.0e-21	34.5
WP_000128596.1\|250203_251199_-	Flp pilus assembly complex ATPase component	NA	NA	NA	NA
WP_000101711.1\|251240_252401_-	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_042634477.1\|252400_253204_-	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA
WP_001067858.1\|253213_253918_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP019649

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019649_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019649_1

3066973-3068936

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

31 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11

The CRISPR arrays of NZ_CP019649_1

>merge|NZ_CP019649|1|3066973-3068936|CRISPRCasFinder,CRT,PILER-CR,CRT,CRISPRCasFinder
GTGTTTATCCCCGCTGGCGCGGGGAACATTTTTCAGCCCTTGTCGACTGCGGAACGCCCCTCGGTTTATCCCCGCTGGCGCGGGGAACACGCGAAATAGTGGGGAAAAACCCCTGGTTAACCCGGTTTATCCCCGCTGGCGCGGGAAACACTAGGCCTTGATACCATCGCTCGCACCTCGTCACGGTTTATCCCCGCTGGCGCGGGGAACACGTTTATTACTGCTTAGTTAATTAATGGGTTGCCGGTTTATCCCCGCTGGCGCGGGGAACACAGGCGAATAATCTCTAATAGTCTCAATTCGTTCGGTTTATCCCCGCTGGCGCGGGGAACACTAAATCTGGCGTCGAGACATTCGAAATAGTGCCGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTTGATTTTGCTGCGATGTTATAACCAGACGGTTTATCCCCGCTGGCGCGGGGAACACTATCCACATATACCCGCAATCATATTCAAGAACGGTTTATCCCCGCTGGCGCGGGGAACACAATCACTGCGGGGGTATTTAGCGGAAACGGCTCGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGCACCTCGAAACGGTTTTAAAACACTACCGTTTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGACCGATGGGGCCAACATCGCCGAACGTGGCGGTTTATCCCCGCTGGCGCGGGGAACACGTTACGTTCGGTAAATGGAAAGCGGCGAATATCGGTTTATCCCCGCTGGCGCGGGGAACACCCAGAAAGTGCCGGTAGTGCCTGATGAACGACCGGTTTATCCCCGCTGGCGCGGGGAACACCGCGCCCACTTCCGTAAAATACAGATAATCCACGGTTTATCCCCGCTGGCGCGGGGAACACGGCAGCGGGCGAGGCAAACACATTCGGGGCGTCGGTTTATCCCCGCTGGCGCGGGGAACACGGCAGCGGGCGAGGCAAACACATTCGGGGCGTCGGTTTATCCCCGCTGGCGCGGGGAACACGGTAATTTCTCATCTAACAGCCTGTACGCCTCAGGTTTATCCCCGCTGGCGCGGGGAACACGAATCTAATGCAACAGATGAATAAACACGTAACGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCGTCAATGCGAAATTTTCCGCGACGCGGTTTATCCCCGCTGGCGCGGGGAACACTCCCATTCACCAACAACAATATCGCCCTGCAACGGTTTATCCCCGCTGGCGCGGGGAACACCGTTGCGTCAGGTTGATCCAGTGCGTCAGCGGCGGTTTATCCCCGCTGGCGCGGGGAACACTCTCGGTCTCGGTCTCGGTCTCGGTAGTGACGCGGTTTATCCCCGCTGGCGCGGGGAACACACTTCCTTCAGTCTTAACGATAATCCGCAACGCGGTTTATCCCCGCTGGCGCGGGGAACACGCAAAATAGCGATGAGCTGGCTACGCCCACTGGCGGTTTATCCCCGCTGGCGCGGGGAACACAGCCGGCGCGAGCCTGGAGGGTTGAATAATGGCGGTTTATCCCCGCTGGCGCGGGGAACACCAATCTCGCATTCGTTACCCCACCTGCATTTTCGGTTTATCCCCGCTGGCGCGGGGAACACGAGGGGATAGGAGTTACGATCCAGCCTGGTTGCGGTTTATCCCCGCTGGCGCGGGGAACACGTGGTTGCAGACCAATCAGCCCGCCAGCGGTTCGGTTTATCCCCGCTGGCGCGGGGAACACCAGCACGAAAAATTATTTACTGTCGTTGCTCACGGTTTATCCCCGCTGGCGCGGGGAACACTGTAACAGTCCGTCGTTAATCAGCGCGGTGGGAGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP019649|1|1|3066973-3067551|CRISPRCasFinder
GTGTTTATCCCCGCTGGCGCGGGGAACAT	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCCGGCGCGAGCCTGGAGGGTTGAATAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAATCTCGCATTCGTTACCCCACCTGCATTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGGGGATAGGAGTTACGATCCAGCCTGGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTAACAGTCCGTCGTTAATCAGCGCGGTGGG


>NZ_CP019649|1|1|3066973-3067550|CRT
GTGTTTATCCCCGCTGGCGCGGGGAACAT	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACAC	AATTAAAGCCGAGGGTGGCACCGCGCCTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCCGGCGCGAGCCTGGAGGGTTGAATAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAATCTCGCATTCGTTACCCCACCTGCATTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGGGGATAGGAGTTACGATCCAGCCTGGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTAACAGTCCGTCGTTAATCAGCGCGGTGGG


>NZ_CP019649|1|1|3067034-3068936|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATCGAGTAACGTGCGCTGGAACGCGTC
GGCGCGGGGAACACAATTAAAGCCGAGGG	TGGCACCGCGCCTTATTCGGTTTATCCCCGCT
GGCGCGGGGAACACGCACCTCGAAACGGT	TTTAAAACACTACCGTTTCGGTTTATCCCCGCT
GGCGCGGGGAACACTGGACCGATGGGGCC	AACATCGCCGAACGTGGCGGTTTATCCCCGCT
GGCGCGGGGAACACGTTACGTTCGGTAAA	TGGAAAGCGGCGAATATCGGTTTATCCCCGCT
GGCGCGGGGAACACCCAGAAAGTGCCGGT	AGTGCCTGATGAACGACCGGTTTATCCCCGCT
GGCGCGGGGAACACCGCGCCCACTTCCGT	AAAATACAGATAATCCACGGTTTATCCCCGCT
GGCGCGGGGAACACGGCAGCGGGCGAGGC	AAACACATTCGGGGCGTCGGTTTATCCCCGCT
GGCGCGGGGAACACGGCAGCGGGCGAGGC	AAACACATTCGGGGCGTCGGTTTATCCCCGCT
GGCGCGGGGAACACGGTAATTTCTCATCT	AACAGCCTGTACGCCTCAGGTTTATCCCCGCT
GGCGCGGGGAACACGAATCTAATGCAACA	GATGAATAAACACGTAACGGTTTATCCCCGCT
GGCGCGGGGAACACTCTTTATCGTCAATG	CGAAATTTTCCGCGACGCGGTTTATCCCCGCT
GGCGCGGGGAACACTCCCATTCACCAACA	ACAATATCGCCCTGCAACGGTTTATCCCCGCT
GGCGCGGGGAACACCGTTGCGTCAGGTTG	ATCCAGTGCGTCAGCGGCGGTTTATCCCCGCT
GGCGCGGGGAACACTCTCGGTCTCGGTCT	CGGTCTCGGTAGTGACGCGGTTTATCCCCGCT
GGCGCGGGGAACACACTTCCTTCAGTCTT	AACGATAATCCGCAACGCGGTTTATCCCCGCT
GGCGCGGGGAACACGCAAAATAGCGATGA	GCTGGCTACGCCCACTGGCGGTTTATCCCCGCT
GGCGCGGGGAACACAGCCGGCGCGAGCCT	GGAGGGTTGAATAATGGCGGTTTATCCCCGCT
GGCGCGGGGAACACCAATCTCGCATTCGT	TACCCCACCTGCATTTTCGGTTTATCCCCGCT
GGCGCGGGGAACACGAGGGGATAGGAGTT	ACGATCCAGCCTGGTTGCGGTTTATCCCCGCT
GGCGCGGGGAACACGTGGTTGCAGACCAA	TCAGCCCGCCAGCGGTTCGGTTTATCCCCGCT
GGCGCGGGGAACACCAGCACGAAAAATTA	TTTACTGTCGTTGCTCACGGTTTATCCCCGCT
GGCGCGGGGAACACTGTAACAGTCCGTCG	TTAATCAGCGCGGTGGGAGGTTTATCCCCGCT
GGCGCGGGGAACAC

>NZ_CP019649|1|2|3067564-3068936|CRT
	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACAC	AATTAAAGCCGAGGGTGGCACCGCGCCTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCCGGCGCGAGCCTGGAGGGTTGAATAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAATCTCGCATTCGTTACCCCACCTGCATTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGGGGATAGGAGTTACGATCCAGCCTGGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTAACAGTCCGTCGTTAATCAGCGCGGTGGG
AGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP019649|1|2|3067625-3068936|CRISPRCasFinder
	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCCGGCGCGAGCCTGGAGGGTTGAATAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAATCTCGCATTCGTTACCCCACCTGCATTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGGGGATAGGAGTTACGATCCAGCCTGGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTAACAGTCCGTCGTTAATCAGCGCGGTGGG
AGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019649.1\|WP_001518648.1\|3069032_3069326_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP019649.1\|WP_000085114.1\|3070874_3071621_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP019649.1\|WP_000134246.1\|3059581_3060631_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP019649.1\|WP_001173663.1\|3062711_3063317_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP019649.1\|WP_000490481.1\|3065911_3066958_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP019649.1\|WP_000517480.1\|3061835_3062147_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP019649.1\|WP_000144832.1\|3069325_3070246_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP019649.1\|WP_000281486.1\|3070242_3070893_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP019649.1\|WP_001221538.1\|3058839_3059601_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP019649.1\|WP_001290660.1\|3079786_3081499_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP019649.1\|WP_000741650.1\|3061106_3061817_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP019649.1\|WP_000210927.1\|3081498_3083298_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP019649.1\|WP_000372384.1\|3064752_3065661_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP019649.1\|WP_000080404.1\|3078976_3079711_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP019649.1\|WP_020837087.1\|3063303_3064743_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP019649.1\|WP_020837085.1\|3072703_3073264_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP019649.1\|WP_001118109.1\|3062337_3062694_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP019649.1\|WP_001219245.1\|3060627_3061107_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP019649.1\|WP_001145543.1\|3077935_3078889_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP019649.1\|WP_000206415.1\|3071631_3072690_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843

Protein	Function_ID	Function_description	E-value
NZ_CP019649.1\|WP_001518648.1\|3069032_3069326_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP019649.1\|WP_000085114.1\|3070874_3071621_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.90971e-48
NZ_CP019649.1\|WP_000134246.1\|3059581_3060631_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP019649.1\|WP_001173663.1\|3062711_3063317_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP019649.1\|WP_000490481.1\|3065911_3066958_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP019649.1\|WP_000517480.1\|3061835_3062147_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP019649.1\|WP_000144832.1\|3069325_3070246_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.21084e-157
NZ_CP019649.1\|WP_000281486.1\|3070242_3070893_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
NZ_CP019649.1\|WP_001221538.1\|3058839_3059601_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP019649.1\|WP_001290660.1\|3079786_3081499_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP019649.1\|WP_000741650.1\|3061106_3061817_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.67998e-119
NZ_CP019649.1\|WP_000210927.1\|3081498_3083298_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP019649.1\|WP_000372384.1\|3064752_3065661_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP019649.1\|WP_000080404.1\|3078976_3079711_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP019649.1\|WP_020837087.1\|3063303_3064743_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP019649.1\|WP_020837085.1\|3072703_3073264_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	3.00753e-33
NZ_CP019649.1\|WP_001118109.1\|3062337_3062694_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
NZ_CP019649.1\|WP_001219245.1\|3060627_3061107_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
NZ_CP019649.1\|WP_001145543.1\|3077935_3078889_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP019649.1\|WP_000206415.1\|3071631_3072690_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131

>NZ_CP019649.1|WP_000490481.1|3065911_3066958_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP019649.1|WP_000372384.1|3064752_3065661_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP019649.1|WP_020837087.1|3063303_3064743_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTERRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPFGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP019649.1|WP_001173663.1|3062711_3063317_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP019649.1|WP_001118109.1|3062337_3062694_-|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP019649.1|WP_000517480.1|3061835_3062147_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP019649.1|WP_000741650.1|3061106_3061817_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP019649.1|WP_001219245.1|3060627_3061107_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP019649.1|WP_000134246.1|3059581_3060631_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP019649.1|WP_001221538.1|3058839_3059601_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP019649.1|WP_001518648.1|3069032_3069326_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP019649.1|WP_000144832.1|3069325_3070246_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP019649.1|WP_000281486.1|3070242_3070893_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>NZ_CP019649.1|WP_000085114.1|3070874_3071621_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAAGVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP019649.1|WP_000206415.1|3071631_3072690_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP019649.1|WP_020837085.1|3072703_3073264_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGADTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP019649.1|WP_001145543.1|3077935_3078889_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP019649.1|WP_000080404.1|3078976_3079711_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP019649.1|WP_001290660.1|3079786_3081499_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP019649.1|WP_000210927.1|3081498_3083298_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPRVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY

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Crispr_ID: NZ_CP019649_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019649_2

3085067-3086377

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

21 spacers

cse2gr11,cas7,cas5,cas6e

The CRISPR arrays of NZ_CP019649_2

>merge|NZ_CP019649|2|3085067-3086377|CRISPRCasFinder,CRT,PILER-CR
ACGGCTATCCTTGTTGGCGCGGGGAACACATCTTCATATTGCGTGACGCTGCCGATGAACGCGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCAGCTAACCATTTCCAGAACTCGTCCGGTTTATCCCTGCTGGCGCGGGGAACACTATAATATGAATTAATTTTTGCGCATAACCTGCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCCGTTCTGCCTCTTCGCACTCTCGATCAACGGTTTATCCCCGCTGGCGCGGGGAACACTGCGTAATGGGCTACCTGAACTTCACATATCCCGGTTTATCCCCGCTAGCGCGGGGAACATATTAAGCGCGCAAAGTTTGGGTTAATTGGACACGGTTTATCCCCGCTGGCGCGGGGAACACCGTATTCGTCACACAGCCCCGTCCAGAAATGACGGTTTATCCCCGCTGGCACGGGGAACACTAACGAACTGAATAAAATGTCAGAAAGTGACGCGGCTTATCCCCGCTGGCGCGGGGAACACGCAGCTTAGCGACGAAATTAAAACCGAACTCACCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCAGTGACTACAGAAGCGTCGCTATCGGGGCGGTTTATCCCCGCTGGCGCGGGGAACACACCGATAAACAACCGCATAGCCTCTTTCGTTTCGATTTATCCCTGCTGGCGCGGGGAACACTGCTCAATAACGTCGTAAATAGCGTAAGCTGGCGGTTTATCCCCGCTGGCGCGGGGAACACGCTCATGTCAAACGCCATCAGCGTTCCGGCATCGGTTTATCCCCGCTAGCGCGGGGAACACAATCGCCAGCCTCGGAAATATTCCATCCTCCGCGGTTTATCCCCGCTGGCGCGGGGAACACAGGAACTAAACAGCCTGACCGTTGAGGATCTGCGGTTTATCCCCGCTGGCGCGGGGAACACACCGGACAAATCTTTTTTTTCCTGTTCCTGTTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGGTCCCCGGCCTCAATACCGCGCTGACGCGGTTTATCCCCGCTGGCGCGGGGAACACTTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCACTATGAACGGATCGGCGCTGATGCCGGCGGTTTATCCCCGCTGGCGCGGGGAACACGGTAAAGCCACACCATTTTTTATTGACCTCGCCGGTTTATCCCCGCTGGCGCGGGGAACACCTAGGAGGCGTAATGAATACTACGTATCAAAACGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP019649|2|3|3085067-3086377|CRISPRCasFinder
ACGGCTATCCTTGTTGGCGCGGGGAACAC	ATCTTCATATTGCGTGACGCTGCCGATGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGATAAACAACCGCATAGCCTCTTTCGTTT
CGATTTATCCCTGCTGGCGCGGGGAACAC	TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
CGGTTTATCCCCGCTAGCGCGGGGAACAC	AATCGCCAGCCTCGGAAATATTCCATCCTCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGAACTAAACAGCCTGACCGTTGAGGATCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGGTCCCCGGCCTCAATACCGCGCTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCACTATGAACGGATCGGCGCTGATGCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAGGAGGCGTAATGAATACTACGTATCAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP019649|2|3|3085067-3086377|CRT
ACGGCTATCCTTGTTGGCGCGGGGAACAC	ATCTTCATATTGCGTGACGCTGCCGATGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGATAAACAACCGCATAGCCTCTTTCGTTT
CGATTTATCCCTGCTGGCGCGGGGAACAC	TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
CGGTTTATCCCCGCTAGCGCGGGGAACAC	AATCGCCAGCCTCGGAAATATTCCATCCTCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGAACTAAACAGCCTGACCGTTGAGGATCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGGTCCCCGGCCTCAATACCGCGCTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCACTATGAACGGATCGGCGCTGATGCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAGGAGGCGTAATGAATACTACGTATCAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP019649|2|2|3085128-3086377|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGATAAACAACCGCATAGCCTCTTTCGTTT
CGATTTATCCCTGCTGGCGCGGGGAACAC	TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
CGGTTTATCCCCGCTAGCGCGGGGAACAC	AATCGCCAGCCTCGGAAATATTCCATCCTCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGAACTAAACAGCCTGACCGTTGAGGATCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGGTCCCCGGCCTCAATACCGCGCTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCACTATGAACGGATCGGCGCTGATGCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAGGAGGCGTAATGAATACTACGTATCAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019649.1\|WP_000080404.1\|3078976_3079711_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP019649.1\|WP_001208013.1\|3084171_3084969_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP019649.1\|WP_000046849.1\|3095282_3096578_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP019649.1\|WP_000226838.1\|3092996_3095231_-\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP019649.1\|WP_020837085.1\|3072703_3073264_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP019649.1\|WP_000108313.1\|3083721_3084084_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP019649.1\|WP_000210449.1\|3090726_3091527_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP019649.1\|WP_001199961.1\|3086673_3087345_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP019649.1\|WP_001290660.1\|3079786_3081499_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP019649.1\|WP_000281486.1\|3070242_3070893_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP019649.1\|WP_000210927.1\|3081498_3083298_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP019649.1\|WP_000480218.1\|3092556_3092913_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
NZ_CP019649.1\|WP_000186400.1\|3096635_3099392_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP019649.1\|WP_000706479.1\|3099435_3100578_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
NZ_CP019649.1\|WP_001145543.1\|3077935_3078889_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP019649.1\|WP_000085114.1\|3070874_3071621_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP019649.1\|WP_024144041.1\|3092294_3092591_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP019649.1\|WP_000210863.1\|3088861_3090499_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP019649.1\|WP_000036734.1\|3087480_3088779_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP019649.1\|WP_000206415.1\|3071631_3072690_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843

Protein	Function_ID	Function_description	E-value
NZ_CP019649.1\|WP_000080404.1\|3078976_3079711_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP019649.1\|WP_001208013.1\|3084171_3084969_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	8.44116e-102
NZ_CP019649.1\|WP_000046849.1\|3095282_3096578_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP019649.1\|WP_000226838.1\|3092996_3095231_-\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP019649.1\|WP_020837085.1\|3072703_3073264_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	3.00753e-33
NZ_CP019649.1\|WP_000108313.1\|3083721_3084084_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP019649.1\|WP_000210449.1\|3090726_3091527_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
NZ_CP019649.1\|WP_001199961.1\|3086673_3087345_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP019649.1\|WP_001290660.1\|3079786_3081499_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP019649.1\|WP_000281486.1\|3070242_3070893_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
NZ_CP019649.1\|WP_000210927.1\|3081498_3083298_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP019649.1\|WP_000480218.1\|3092556_3092913_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
NZ_CP019649.1\|WP_000186400.1\|3096635_3099392_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP019649.1\|WP_000706479.1\|3099435_3100578_-\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
NZ_CP019649.1\|WP_001145543.1\|3077935_3078889_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP019649.1\|WP_000085114.1\|3070874_3071621_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.90971e-48
NZ_CP019649.1\|WP_024144041.1\|3092294_3092591_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	9.62015e-14
NZ_CP019649.1\|WP_000210863.1\|3088861_3090499_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP019649.1\|WP_000036734.1\|3087480_3088779_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP019649.1\|WP_000206415.1\|3071631_3072690_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131

>NZ_CP019649.1|WP_001208013.1|3084171_3084969_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKVRPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDSSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP019649.1|WP_000108313.1|3083721_3084084_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP019649.1|WP_000210927.1|3081498_3083298_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPRVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP019649.1|WP_001290660.1|3079786_3081499_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP019649.1|WP_000080404.1|3078976_3079711_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP019649.1|WP_001145543.1|3077935_3078889_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP019649.1|WP_020837085.1|3072703_3073264_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGADTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP019649.1|WP_000206415.1|3071631_3072690_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP019649.1|WP_000085114.1|3070874_3071621_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAAGVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP019649.1|WP_000281486.1|3070242_3070893_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>NZ_CP019649.1|WP_001199961.1|3086673_3087345_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP019649.1|WP_000036734.1|3087480_3088779_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP019649.1|WP_000210863.1|3088861_3090499_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP019649.1|WP_000210449.1|3090726_3091527_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP019649.1|WP_024144041.1|3092294_3092591_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFKRHIIYFIQSVTEVIVIRILSQNQDTGKHVNWL
>NZ_CP019649.1|WP_000480218.1|3092556_3092913_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>NZ_CP019649.1|WP_000226838.1|3092996_3095231_-|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>NZ_CP019649.1|WP_000046849.1|3095282_3096578_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVIGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP019649.1|WP_000186400.1|3096635_3099392_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>NZ_CP019649.1|WP_000706479.1|3099435_3100578_-|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVSVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP019649_1	1.32\|3068891\|32\|NZ_CP019649\|PILER-CR	3068891-3068922	32	NZ_CP019649.1	2244783-2244814	0	1.0
NZ_CP019649_1	1.54\|3068876\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068876-3068907	32	NZ_CP019649.1	2244783-2244814	0	1.0

1. spacer 1.32|3068891|32|NZ_CP019649|PILER-CR matches to position: 2244783-2244814, mismatch: 0, identity: 1.0

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
tgtaacagtccgtcgttaatcagcgcggtggg	Protospacer
********************************

2. spacer 1.54|3068876|32|NZ_CP019649|CRT,CRISPRCasFinder matches to position: 2244783-2244814, mismatch: 0, identity: 1.0

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
tgtaacagtccgtcgttaatcagcgcggtggg	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019649_1	1.13\|3067731\|32\|NZ_CP019649\|PILER-CR	3067731-3067762	32	CP051275	Salmonella phage SW-37, complete genome	24295-24326	1	0.969
NZ_CP019649_1	1.13\|3067731\|32\|NZ_CP019649\|PILER-CR	3067731-3067762	32	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44002	1	0.969
NZ_CP019649_1	1.35\|3067716\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3067716-3067747	32	CP051275	Salmonella phage SW-37, complete genome	24295-24326	1	0.969
NZ_CP019649_1	1.35\|3067716\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3067716-3067747	32	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44002	1	0.969
NZ_CP019649_2	2.5\|3085340\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085340-3085371	32	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	177960-177991	1	0.969
NZ_CP019649_2	2.5\|3085340\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085340-3085371	32	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	67131-67162	1	0.969
NZ_CP019649_2	2.11\|3085707\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085707-3085738	32	NZ_CP030204	Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence	130783-130814	2	0.938
NZ_CP019649_1	1.13\|3067731\|32\|NZ_CP019649\|PILER-CR	3067731-3067762	32	JQ182729	Enterobacterial phage mEp390, complete genome	23951-23982	3	0.906
NZ_CP019649_1	1.35\|3067716\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3067716-3067747	32	JQ182729	Enterobacterial phage mEp390, complete genome	23951-23982	3	0.906
NZ_CP019649_1	1.10\|3067551\|28\|NZ_CP019649\|PILER-CR	3067551-3067578	28	NC_009927	Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence	337987-338014	5	0.821
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509804-509835	5	0.844
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509804-509835	5	0.844
NZ_CP019649_1	1.15\|3067853\|32\|NZ_CP019649\|PILER-CR	3067853-3067884	32	MT774487	Salmonella phage MG40, complete genome	21746-21777	6	0.812
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336397-336428	6	0.812
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	254-285	6	0.812
NZ_CP019649_1	1.37\|3067838\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3067838-3067869	32	MT774487	Salmonella phage MG40, complete genome	21746-21777	6	0.812
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336397-336428	6	0.812
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	254-285	6	0.812
NZ_CP019649_1	1.9\|3067490\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3067490-3067521	32	NZ_CP013929	Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence	188177-188208	7	0.781
NZ_CP019649_1	1.9\|3067490\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3067490-3067521	32	CP013931	Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence	192938-192969	7	0.781
NZ_CP019649_1	1.9\|3067490\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3067490-3067521	32	NC_019394	Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence	188204-188235	7	0.781
NZ_CP019649_1	1.15\|3067853\|32\|NZ_CP019649\|PILER-CR	3067853-3067884	32	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39483	7	0.781
NZ_CP019649_1	1.15\|3067853\|32\|NZ_CP019649\|PILER-CR	3067853-3067884	32	MH370364	Salmonella phage S107, complete genome	29959-29990	7	0.781
NZ_CP019649_1	1.15\|3067853\|32\|NZ_CP019649\|PILER-CR	3067853-3067884	32	MH370382	Salmonella phage S135, complete genome	29959-29990	7	0.781
NZ_CP019649_1	1.15\|3067853\|32\|NZ_CP019649\|PILER-CR	3067853-3067884	32	MH370383	Salmonella phage S137, complete genome	29959-29990	7	0.781
NZ_CP019649_1	1.17\|3067975\|32\|NZ_CP019649\|PILER-CR	3067975-3068006	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	535406-535437	7	0.781
NZ_CP019649_1	1.18\|3068036\|32\|NZ_CP019649\|PILER-CR	3068036-3068067	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	535406-535437	7	0.781
NZ_CP019649_1	1.20\|3068158\|32\|NZ_CP019649\|PILER-CR	3068158-3068189	32	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29079	7	0.781
NZ_CP019649_1	1.20\|3068158\|32\|NZ_CP019649\|PILER-CR	3068158-3068189	32	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142294-142325	7	0.781
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MH509446	Gordonia phage DelRio, complete genome	6223-6254	7	0.781
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MH509446	Gordonia phage DelRio, complete genome	6229-6260	7	0.781
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MT758688	Mycobacterium phage CELFI, complete genome	74684-74715	7	0.781
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NC_006363	Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence	85980-86011	7	0.781
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_LN868942	Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence	39475-39506	7	0.781
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP031420	Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence	10466-10497	7	0.781
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619925-619956	7	0.781
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NC_008697	Nocardioides sp. JS614 plasmid pNOCA01, complete sequence	117019-117050	7	0.781
NZ_CP019649_1	1.27\|3068586\|32\|NZ_CP019649\|PILER-CR	3068586-3068617	32	MN693183	Marine virus AFVG_25M360, complete genome	30035-30066	7	0.781
NZ_CP019649_1	1.32\|3068891\|32\|NZ_CP019649\|PILER-CR	3068891-3068922	32	NZ_CP014127	Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence	282797-282828	7	0.781
NZ_CP019649_1	1.32\|3068891\|32\|NZ_CP019649\|PILER-CR	3068891-3068922	32	NZ_CP028350	Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence	226270-226301	7	0.781
NZ_CP019649_1	1.32\|3068891\|32\|NZ_CP019649\|PILER-CR	3068891-3068922	32	NC_014258	Pantoea vagans C9-1 plasmid pPag3, complete sequence	345037-345068	7	0.781
NZ_CP019649_1	1.32\|3068891\|32\|NZ_CP019649\|PILER-CR	3068891-3068922	32	NZ_CP038854	Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence	185633-185664	7	0.781
NZ_CP019649_1	1.37\|3067838\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3067838-3067869	32	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39483	7	0.781
NZ_CP019649_1	1.37\|3067838\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3067838-3067869	32	MH370364	Salmonella phage S107, complete genome	29959-29990	7	0.781
NZ_CP019649_1	1.37\|3067838\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3067838-3067869	32	MH370382	Salmonella phage S135, complete genome	29959-29990	7	0.781
NZ_CP019649_1	1.37\|3067838\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3067838-3067869	32	MH370383	Salmonella phage S137, complete genome	29959-29990	7	0.781
NZ_CP019649_1	1.39\|3067960\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3067960-3067991	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	535406-535437	7	0.781
NZ_CP019649_1	1.40\|3068021\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068021-3068052	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	535406-535437	7	0.781
NZ_CP019649_1	1.42\|3068143\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068143-3068174	32	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29079	7	0.781
NZ_CP019649_1	1.42\|3068143\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068143-3068174	32	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142294-142325	7	0.781
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MH509446	Gordonia phage DelRio, complete genome	6223-6254	7	0.781
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MH509446	Gordonia phage DelRio, complete genome	6229-6260	7	0.781
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MT758688	Mycobacterium phage CELFI, complete genome	74684-74715	7	0.781
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NC_006363	Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence	85980-86011	7	0.781
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_LN868942	Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence	39475-39506	7	0.781
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP031420	Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence	10466-10497	7	0.781
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619925-619956	7	0.781
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NC_008697	Nocardioides sp. JS614 plasmid pNOCA01, complete sequence	117019-117050	7	0.781
NZ_CP019649_1	1.49\|3068571\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068571-3068602	32	MN693183	Marine virus AFVG_25M360, complete genome	30035-30066	7	0.781
NZ_CP019649_1	1.54\|3068876\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068876-3068907	32	NZ_CP014127	Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence	282797-282828	7	0.781
NZ_CP019649_1	1.54\|3068876\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068876-3068907	32	NZ_CP028350	Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence	226270-226301	7	0.781
NZ_CP019649_1	1.54\|3068876\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068876-3068907	32	NC_014258	Pantoea vagans C9-1 plasmid pPag3, complete sequence	345037-345068	7	0.781
NZ_CP019649_1	1.54\|3068876\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068876-3068907	32	NZ_CP038854	Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence	185633-185664	7	0.781
NZ_CP019649_2	2.19\|3086195\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3086195-3086226	32	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	208454-208485	7	0.781
NZ_CP019649_2	2.19\|3086195\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3086195-3086226	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	449563-449594	7	0.781
NZ_CP019649_2	2.19\|3086195\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3086195-3086226	32	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	167100-167131	7	0.781
NZ_CP019649_1	1.2\|3067063\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3067063-3067094	32	MN855803	Bacteriophage sp. isolate 108, partial genome	10057-10088	8	0.75
NZ_CP019649_1	1.8\|3067429\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3067429-3067460	32	NZ_CP016489	Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence	8862-8893	8	0.75
NZ_CP019649_1	1.8\|3067429\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3067429-3067460	32	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	151600-151631	8	0.75
NZ_CP019649_1	1.19\|3068097\|32\|NZ_CP019649\|PILER-CR	3068097-3068128	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	203354-203385	8	0.75
NZ_CP019649_1	1.23\|3068341\|32\|NZ_CP019649\|PILER-CR	3068341-3068372	32	AP013976	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, * SEQUENCING IN PROGRESS *	6246-6277	8	0.75
NZ_CP019649_1	1.23\|3068341\|32\|NZ_CP019649\|PILER-CR	3068341-3068372	32	JX536274	Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence	3959-3990	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336385-336416	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509810-509841	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	JQ807255	Environmental Halophage eHP-36, partial genome	3413-3444	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MH509446	Gordonia phage DelRio, complete genome	6235-6266	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619931-619962	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MK359319	Gordonia phage Parada, complete genome	5938-5969	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MK359319	Gordonia phage Parada, complete genome	5926-5957	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MK376958	Gordonia phage Brylie, complete genome	5938-5969	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MK376958	Gordonia phage Brylie, complete genome	5926-5957	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MH399781	Gordonia phage Nadeem, complete genome	5938-5969	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MH399781	Gordonia phage Nadeem, complete genome	5926-5957	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MK967392	Gordonia phage GrandSlam, complete genome	5971-6002	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MK967392	Gordonia phage GrandSlam, complete genome	5959-5990	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MK279893	Gordonia phage WheatThin, complete genome	5938-5969	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MK279893	Gordonia phage WheatThin, complete genome	5926-5957	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MT701595	Streptomyces phage Shaeky, complete genome	29602-29633	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NC_031247	Gordonia phage BetterKatz, complete genome	6191-6222	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NC_031247	Gordonia phage BetterKatz, complete genome	6179-6210	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MK305885	Gordonia phage Mulch, complete genome	5938-5969	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MK305885	Gordonia phage Mulch, complete genome	5926-5957	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP014599	Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence	68312-68343	8	0.75
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MG269973	TM7 phage DolZOral124_53_65, complete genome	38250-38281	8	0.75
NZ_CP019649_1	1.32\|3068891\|32\|NZ_CP019649\|PILER-CR	3068891-3068922	32	MK524494	Mycobacterium phage Rabbs, complete genome	19994-20025	8	0.75
NZ_CP019649_1	1.32\|3068891\|32\|NZ_CP019649\|PILER-CR	3068891-3068922	32	KX641266	Mycobacterium phage Terror, complete genome	20003-20034	8	0.75
NZ_CP019649_1	1.32\|3068891\|32\|NZ_CP019649\|PILER-CR	3068891-3068922	32	NC_031102	Mycobacterium phage Sneeze, complete genome	19993-20024	8	0.75
NZ_CP019649_1	1.32\|3068891\|32\|NZ_CP019649\|PILER-CR	3068891-3068922	32	KX641265	Mycobacterium phage Taheera, complete genome	20003-20034	8	0.75
NZ_CP019649_1	1.32\|3068891\|32\|NZ_CP019649\|PILER-CR	3068891-3068922	32	NC_014811	Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence	50736-50767	8	0.75
NZ_CP019649_1	1.41\|3068082\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068082-3068113	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	203354-203385	8	0.75
NZ_CP019649_1	1.45\|3068326\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068326-3068357	32	AP013976	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, * SEQUENCING IN PROGRESS *	6246-6277	8	0.75
NZ_CP019649_1	1.45\|3068326\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068326-3068357	32	JX536274	Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence	3959-3990	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336385-336416	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509810-509841	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	JQ807255	Environmental Halophage eHP-36, partial genome	3413-3444	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MH509446	Gordonia phage DelRio, complete genome	6235-6266	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619931-619962	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MK359319	Gordonia phage Parada, complete genome	5938-5969	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MK359319	Gordonia phage Parada, complete genome	5926-5957	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MK376958	Gordonia phage Brylie, complete genome	5938-5969	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MK376958	Gordonia phage Brylie, complete genome	5926-5957	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MH399781	Gordonia phage Nadeem, complete genome	5938-5969	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MH399781	Gordonia phage Nadeem, complete genome	5926-5957	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MK967392	Gordonia phage GrandSlam, complete genome	5971-6002	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MK967392	Gordonia phage GrandSlam, complete genome	5959-5990	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MK279893	Gordonia phage WheatThin, complete genome	5938-5969	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MK279893	Gordonia phage WheatThin, complete genome	5926-5957	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MT701595	Streptomyces phage Shaeky, complete genome	29602-29633	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NC_031247	Gordonia phage BetterKatz, complete genome	6191-6222	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NC_031247	Gordonia phage BetterKatz, complete genome	6179-6210	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MK305885	Gordonia phage Mulch, complete genome	5938-5969	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MK305885	Gordonia phage Mulch, complete genome	5926-5957	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP014599	Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence	68312-68343	8	0.75
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MG269973	TM7 phage DolZOral124_53_65, complete genome	38250-38281	8	0.75
NZ_CP019649_1	1.54\|3068876\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068876-3068907	32	MK524494	Mycobacterium phage Rabbs, complete genome	19994-20025	8	0.75
NZ_CP019649_1	1.54\|3068876\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068876-3068907	32	KX641266	Mycobacterium phage Terror, complete genome	20003-20034	8	0.75
NZ_CP019649_1	1.54\|3068876\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068876-3068907	32	NC_031102	Mycobacterium phage Sneeze, complete genome	19993-20024	8	0.75
NZ_CP019649_1	1.54\|3068876\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068876-3068907	32	KX641265	Mycobacterium phage Taheera, complete genome	20003-20034	8	0.75
NZ_CP019649_1	1.54\|3068876\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068876-3068907	32	NC_014811	Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence	50736-50767	8	0.75
NZ_CP019649_2	2.8\|3085523\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085523-3085554	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	135469-135500	8	0.75
NZ_CP019649_2	2.8\|3085523\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085523-3085554	32	NZ_CP031801	Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence	11654-11685	8	0.75
NZ_CP019649_2	2.13\|3085829\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085829-3085860	32	LQ277707	Sequence 2 from Patent WO2016071503	12422-12453	8	0.75
NZ_CP019649_2	2.13\|3085829\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085829-3085860	32	LZ998055	JP 2017534684-A/2: Phage Therapy	12422-12453	8	0.75
NZ_CP019649_2	2.14\|3085890\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085890-3085921	32	CP001770	Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence	145771-145802	8	0.75
NZ_CP019649_1	1.15\|3067853\|32\|NZ_CP019649\|PILER-CR	3067853-3067884	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32866-32897	9	0.719
NZ_CP019649_1	1.22\|3068280\|32\|NZ_CP019649\|PILER-CR	3068280-3068311	32	MT162468	Synechococcus phage S-H25, complete genome	69929-69960	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP028537	Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence	45644-45675	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_AP023191	Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence	47035-47066	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MN539017	Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence	71637-71668	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MN539018	Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence	121312-121343	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MT077888	Escherichia coli plasmid p65, complete sequence	47129-47160	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NC_009838	Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence	46533-46564	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP044306	Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence	130757-130788	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP039170	Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence	69620-69651	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	CP048299	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence	195977-196008	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	CP048303	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence	41265-41296	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP037959	Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence	45076-45107	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP039861	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence	239710-239741	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP048776	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence	45076-45107	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NC_019114	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence	43326-43357	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_AP023198	Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence	47035-47066	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	5926-5957	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	240147-240178	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP027411	Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence	73185-73216	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	JQ807227	Environmental Halophage eHP-6, partial genome	2886-2917	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619919-619950	9	0.719
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	248-279	9	0.719
NZ_CP019649_1	1.37\|3067838\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3067838-3067869	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32866-32897	9	0.719
NZ_CP019649_1	1.44\|3068265\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068265-3068296	32	MT162468	Synechococcus phage S-H25, complete genome	69929-69960	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP028537	Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence	45644-45675	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_AP023191	Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence	47035-47066	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MN539017	Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence	71637-71668	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MN539018	Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence	121312-121343	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MT077888	Escherichia coli plasmid p65, complete sequence	47129-47160	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NC_009838	Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence	46533-46564	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP044306	Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence	130757-130788	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP039170	Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence	69620-69651	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	CP048299	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence	195977-196008	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	CP048303	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence	41265-41296	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP037959	Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence	45076-45107	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP039861	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence	239710-239741	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP048776	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence	45076-45107	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NC_019114	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence	43326-43357	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_AP023198	Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence	47035-47066	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	5926-5957	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	240147-240178	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP027411	Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence	73185-73216	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	JQ807227	Environmental Halophage eHP-6, partial genome	2886-2917	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619919-619950	9	0.719
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	248-279	9	0.719
NZ_CP019649_2	2.10\|3085646\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085646-3085677	32	NZ_CP051686	Duganella sp. GN2-R2 plasmid unnamed1, complete sequence	45237-45268	9	0.719
NZ_CP019649_2	2.15\|3085951\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085951-3085982	32	MN062720	Microbacterium phage FuzzBuster, complete genome	19374-19405	9	0.719
NZ_CP019649_2	2.16\|3086012\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3086012-3086043	32	MN694645	Marine virus AFVG_250M761, complete genome	31050-31081	9	0.719
NZ_CP019649_2	2.19\|3086195\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3086195-3086226	32	DQ674738	Aeromonas phage phiO18P, complete genome	15707-15738	9	0.719
NZ_CP019649_2	2.19\|3086195\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3086195-3086226	32	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	380725-380756	9	0.719
NZ_CP019649_2	2.19\|3086195\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3086195-3086226	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	153785-153816	9	0.719
NZ_CP019649_2	2.20\|3086256\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3086256-3086287	32	MN693046	Marine virus AFVG_25M413, complete genome	4323-4354	9	0.719
NZ_CP019649_2	2.20\|3086256\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3086256-3086287	32	MN693008	Marine virus AFVG_117M9, complete genome	4316-4347	9	0.719
NZ_CP019649_1	1.1\|3067002\|32\|NZ_CP019649\|CRISPRCasFinder,CRT	3067002-3067033	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
NZ_CP019649_1	1.1\|3067002\|32\|NZ_CP019649\|CRISPRCasFinder,CRT	3067002-3067033	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
NZ_CP019649_1	1.13\|3067731\|32\|NZ_CP019649\|PILER-CR	3067731-3067762	32	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	153476-153507	10	0.688
NZ_CP019649_1	1.22\|3068280\|32\|NZ_CP019649\|PILER-CR	3068280-3068311	32	LN681539	Clostridium phage phiCD505, complete genome	8933-8964	10	0.688
NZ_CP019649_1	1.22\|3068280\|32\|NZ_CP019649\|PILER-CR	3068280-3068311	32	JX145341	Clostridium phage phiMMP02, complete genome	8932-8963	10	0.688
NZ_CP019649_1	1.22\|3068280\|32\|NZ_CP019649\|PILER-CR	3068280-3068311	32	NC_011398	Clostridium phage phiCD27, complete genome	8924-8955	10	0.688
NZ_CP019649_1	1.22\|3068280\|32\|NZ_CP019649\|PILER-CR	3068280-3068311	32	NC_048642	Clostridium phage CDKM9, complete genome	8871-8902	10	0.688
NZ_CP019649_1	1.22\|3068280\|32\|NZ_CP019649\|PILER-CR	3068280-3068311	32	KX228400	Clostridium phage CDKM15, complete genome	9066-9097	10	0.688
NZ_CP019649_1	1.23\|3068341\|32\|NZ_CP019649\|PILER-CR	3068341-3068372	32	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	53255-53286	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_KY689633	Escherichia coli strain 100R plasmid p100R, complete sequence	90192-90223	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_KY689632	Escherichia coli strain 19-M12 plasmid p19M12, complete sequence	93444-93475	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP045446	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence	47441-47472	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_KU743384	Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence	181822-181853	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_KU254578	Escherichia coli strain YD786 plasmid pYD786-1, complete sequence	164955-164986	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_KX129782	Escherichia coli strain S38 plasmid pS38, complete sequence	46429-46460	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP015833	Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence	45081-45112	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	LT221036	Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence	41890-41921	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	CP019195	Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence	98508-98539	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP045449	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence	47440-47471	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP015096	Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence	24746-24777	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	MN732922	Escherichia coli strain 49K plasmid unnamed, complete sequence	70876-70907	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP020493	Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence	47996-48027	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	CP031284	Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence	60929-60960	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	CP042895	Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence	106230-106261	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP022735	Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence	61639-61670	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	CP042898	Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence	125697-125728	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP022165	Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence	45079-45110	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP012931	Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence	119619-119650	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP023143	Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence	136443-136474	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP026936	Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence	46428-46459	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP025402	Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence	182643-182674	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP026933	Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence	46278-46309	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_MH924589	Escherichia coli strain RDB9 plasmid pRDB9, complete sequence	197026-197057	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_MH208235	Escherichia coli strain APECA2 plasmid pJMA2, complete sequence	166860-166891	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_MK169211	Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence	46091-46122	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP016838	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence	46820-46851	10	0.688
NZ_CP019649_1	1.24\|3068402\|32\|NZ_CP019649\|PILER-CR	3068402-3068433	32	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	452410-452441	10	0.688
NZ_CP019649_1	1.35\|3067716\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3067716-3067747	32	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	153476-153507	10	0.688
NZ_CP019649_1	1.44\|3068265\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068265-3068296	32	LN681539	Clostridium phage phiCD505, complete genome	8933-8964	10	0.688
NZ_CP019649_1	1.44\|3068265\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068265-3068296	32	JX145341	Clostridium phage phiMMP02, complete genome	8932-8963	10	0.688
NZ_CP019649_1	1.44\|3068265\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068265-3068296	32	NC_011398	Clostridium phage phiCD27, complete genome	8924-8955	10	0.688
NZ_CP019649_1	1.44\|3068265\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068265-3068296	32	NC_048642	Clostridium phage CDKM9, complete genome	8871-8902	10	0.688
NZ_CP019649_1	1.44\|3068265\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068265-3068296	32	KX228400	Clostridium phage CDKM15, complete genome	9066-9097	10	0.688
NZ_CP019649_1	1.45\|3068326\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068326-3068357	32	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	53255-53286	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_KY689633	Escherichia coli strain 100R plasmid p100R, complete sequence	90192-90223	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_KY689632	Escherichia coli strain 19-M12 plasmid p19M12, complete sequence	93444-93475	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP045446	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence	47441-47472	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_KU743384	Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence	181822-181853	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_KU254578	Escherichia coli strain YD786 plasmid pYD786-1, complete sequence	164955-164986	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_KX129782	Escherichia coli strain S38 plasmid pS38, complete sequence	46429-46460	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP015833	Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence	45081-45112	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	LT221036	Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence	41890-41921	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	CP019195	Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence	98508-98539	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP045449	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence	47440-47471	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP015096	Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence	24746-24777	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	MN732922	Escherichia coli strain 49K plasmid unnamed, complete sequence	70876-70907	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP020493	Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence	47996-48027	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	CP031284	Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence	60929-60960	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	CP042895	Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence	106230-106261	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP022735	Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence	61639-61670	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	CP042898	Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence	125697-125728	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP022165	Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence	45079-45110	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP012931	Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence	119619-119650	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP023143	Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence	136443-136474	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP026936	Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence	46428-46459	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP025402	Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence	182643-182674	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP026933	Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence	46278-46309	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_MH924589	Escherichia coli strain RDB9 plasmid pRDB9, complete sequence	197026-197057	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_MH208235	Escherichia coli strain APECA2 plasmid pJMA2, complete sequence	166860-166891	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_MK169211	Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence	46091-46122	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP016838	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence	46820-46851	10	0.688
NZ_CP019649_1	1.46\|3068387\|32\|NZ_CP019649\|CRT,CRISPRCasFinder	3068387-3068418	32	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	452410-452441	10	0.688
NZ_CP019649_2	2.1\|3085096\|32\|NZ_CP019649\|CRISPRCasFinder,CRT	3085096-3085127	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	146919-146950	10	0.688
NZ_CP019649_2	2.4\|3085279\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085279-3085310	32	NZ_CP044072	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence	99817-99848	10	0.688
NZ_CP019649_2	2.15\|3085951\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085951-3085982	32	NZ_CP019257	Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence	20006-20037	10	0.688
NZ_CP019649_2	2.15\|3085951\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085951-3085982	32	NZ_CP019274	Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence	9024-9055	10	0.688
NZ_CP019649_2	2.15\|3085951\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085951-3085982	32	NZ_CP019275	Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence	27130-27161	10	0.688
NZ_CP019649_2	2.15\|3085951\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085951-3085982	32	NZ_CP019279	Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence	19363-19394	10	0.688
NZ_CP019649_2	2.15\|3085951\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085951-3085982	32	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	23427-23458	10	0.688
NZ_CP019649_2	2.15\|3085951\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085951-3085982	32	NC_049342	Escherichia phage 500465-1, complete genome	24342-24373	10	0.688
NZ_CP019649_2	2.15\|3085951\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085951-3085982	32	KY271398	Klebsiella phage 4 LV-2017, complete genome	28240-28271	10	0.688
NZ_CP019649_2	2.15\|3085951\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3085951-3085982	32	CP025900	Escherichia phage sp., complete genome	24342-24373	10	0.688
NZ_CP019649_2	2.19\|3086195\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3086195-3086226	32	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	234768-234799	11	0.656
NZ_CP019649_2	2.19\|3086195\|32\|NZ_CP019649\|CRISPRCasFinder,CRT,PILER-CR	3086195-3086226	32	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	299431-299462	11	0.656

1. spacer 1.13|3067731|32|NZ_CP019649|PILER-CR matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cggaccgatggggccaacatcgccgaacgtgg	Protospacer
.*******************************

2. spacer 1.13|3067731|32|NZ_CP019649|PILER-CR matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggaccgatggggccaacatcgccgaatgtgg	Protospacer
***************************.****

3. spacer 1.35|3067716|32|NZ_CP019649|CRT,CRISPRCasFinder matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cggaccgatggggccaacatcgccgaacgtgg	Protospacer
.*******************************

4. spacer 1.35|3067716|32|NZ_CP019649|CRT,CRISPRCasFinder matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggaccgatggggccaacatcgccgaatgtgg	Protospacer
***************************.****

5. spacer 2.5|3085340|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969

tgcgtaatgggctacctgaacttcacatatcc	CRISPR spacer
tgcgtagtgggctacctgaacttcacatatcc	Protospacer
******.*************************

6. spacer 2.5|3085340|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969

tgcgtaatgggctacctgaacttcacatatcc	CRISPR spacer
tgcgtagtgggctacctgaacttcacatatcc	Protospacer
******.*************************

7. spacer 2.11|3085707|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030204 (Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence) position: , mismatch: 2, identity: 0.938

accgataaacaaccgcatagcctctttcgttt	CRISPR spacer
accgataaacaatcgcatggcctctttcgttt	Protospacer
************.*****.*************

8. spacer 1.13|3067731|32|NZ_CP019649|PILER-CR matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 3, identity: 0.906

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggacctatggggccaacatcaccgaacgtag	Protospacer
****** **************.********.*

9. spacer 1.35|3067716|32|NZ_CP019649|CRT,CRISPRCasFinder matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 3, identity: 0.906

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggacctatggggccaacatcaccgaacgtag	Protospacer
****** **************.********.*

10. spacer 1.10|3067551|28|NZ_CP019649|PILER-CR matches to NC_009927 (Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence) position: , mismatch: 5, identity: 0.821

gatcgagtaacgtgcgctggaacgcgtc	CRISPR spacer
gattgaggaacgtgcgctggaacgatta	Protospacer
***.*** ****************  *

11. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 5, identity: 0.844

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctgggtctcggtctcggtctcggttgtctgg	Protospacer
*** ********************* **   *

12. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 5, identity: 0.844

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctgggtctcggtctcggtctcggttgtctgg	Protospacer
*** ********************* **   *

13. spacer 1.15|3067853|32|NZ_CP019649|PILER-CR matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
ccagccagtgccggtagtgcctgatgaaatgg	Protospacer
****  **********************  .

14. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcggtctcggtc	Protospacer
*************************  .*..

15. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcg-gtagtgacg	CRISPR spacer
tctcagtctcggtctcagtctcgcgtgggggc-	Protospacer
****.***********.****** **.* *.*

16. spacer 1.37|3067838|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
ccagccagtgccggtagtgcctgatgaaatgg	Protospacer
****  **********************  .

17. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcggtctcggtc	Protospacer
*************************  .*..

18. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcg-gtagtgacg	CRISPR spacer
tctcagtctcggtctcagtctcgcgtgggggc-	Protospacer
****.***********.****** **.* *.*

19. spacer 1.9|3067490|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013929 (Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

20. spacer 1.9|3067490|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to CP013931 (Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

21. spacer 1.9|3067490|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NC_019394 (Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

22. spacer 1.15|3067853|32|NZ_CP019649|PILER-CR matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

23. spacer 1.15|3067853|32|NZ_CP019649|PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

24. spacer 1.15|3067853|32|NZ_CP019649|PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

25. spacer 1.15|3067853|32|NZ_CP019649|PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

26. spacer 1.17|3067975|32|NZ_CP019649|PILER-CR matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcagcgggcgaggcaaacacattcggggcgt	CRISPR spacer
gccacggcgcgaggcaaacacattcaggtcgc	Protospacer
* **  * *****************.** **.

27. spacer 1.18|3068036|32|NZ_CP019649|PILER-CR matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcagcgggcgaggcaaacacattcggggcgt	CRISPR spacer
gccacggcgcgaggcaaacacattcaggtcgc	Protospacer
* **  * *****************.** **.

28. spacer 1.20|3068158|32|NZ_CP019649|PILER-CR matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

29. spacer 1.20|3068158|32|NZ_CP019649|PILER-CR matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

30. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgcggtctcggtgccctcg	Protospacer
*.************ **********. .  **

31. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtttcggtctcggtcgcggtctcggtg	Protospacer
*******.************ ****  .*..*

32. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MT758688 (Mycobacterium phage CELFI, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtcccggtcccggtctcggtcccgttg	Protospacer
********.*****.**********  .* .*

33. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

34. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_LN868942 (Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

35. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP031420 (Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

36. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggcctcggcctcggtctcggcctcggcg	Protospacer
******.*****.***********.  .*.**

37. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggcggcggcg	Protospacer
.*****.*****.***********..*.*.**

38. spacer 1.27|3068586|32|NZ_CP019649|PILER-CR matches to MN693183 (Marine virus AFVG_25M360, complete genome) position: , mismatch: 7, identity: 0.781

agccggcgc-gagcctggagggttgaataatgg	CRISPR spacer
-gcggattcagagtttggagggttgaataatgg	Protospacer
 ** *.. * ***..******************

39. spacer 1.32|3068891|32|NZ_CP019649|PILER-CR matches to NZ_CP014127 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

40. spacer 1.32|3068891|32|NZ_CP019649|PILER-CR matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

41. spacer 1.32|3068891|32|NZ_CP019649|PILER-CR matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

42. spacer 1.32|3068891|32|NZ_CP019649|PILER-CR matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

43. spacer 1.37|3067838|32|NZ_CP019649|CRT,CRISPRCasFinder matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

44. spacer 1.37|3067838|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

45. spacer 1.37|3067838|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

46. spacer 1.37|3067838|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

47. spacer 1.39|3067960|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcagcgggcgaggcaaacacattcggggcgt	CRISPR spacer
gccacggcgcgaggcaaacacattcaggtcgc	Protospacer
* **  * *****************.** **.

48. spacer 1.40|3068021|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcagcgggcgaggcaaacacattcggggcgt	CRISPR spacer
gccacggcgcgaggcaaacacattcaggtcgc	Protospacer
* **  * *****************.** **.

49. spacer 1.42|3068143|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

50. spacer 1.42|3068143|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

51. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgcggtctcggtgccctcg	Protospacer
*.************ **********. .  **

52. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtttcggtctcggtcgcggtctcggtg	Protospacer
*******.************ ****  .*..*

53. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MT758688 (Mycobacterium phage CELFI, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtcccggtcccggtctcggtcccgttg	Protospacer
********.*****.**********  .* .*

54. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

55. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_LN868942 (Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

56. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP031420 (Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

57. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggcctcggcctcggtctcggcctcggcg	Protospacer
******.*****.***********.  .*.**

58. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggcggcggcg	Protospacer
.*****.*****.***********..*.*.**

59. spacer 1.49|3068571|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MN693183 (Marine virus AFVG_25M360, complete genome) position: , mismatch: 7, identity: 0.781

agccggcgc-gagcctggagggttgaataatgg	CRISPR spacer
-gcggattcagagtttggagggttgaataatgg	Protospacer
 ** *.. * ***..******************

60. spacer 1.54|3068876|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP014127 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

61. spacer 1.54|3068876|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

62. spacer 1.54|3068876|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

63. spacer 1.54|3068876|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

64. spacer 2.19|3086195|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.781

---gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ttcgagc---atgaccggatcggcgctggtgccga	Protospacer
   *.**   **** *************.*****.

65. spacer 2.19|3086195|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.781

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ggcggcggtgaaaggatcggcggtgatgccgg	Protospacer
**  .* .**** ********* *********

66. spacer 2.19|3086195|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 7, identity: 0.781

---gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ttcgagc---atgaccggatcggcgctggtgccga	Protospacer
   *.**   **** *************.*****.

67. spacer 1.2|3067063|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 8, identity: 0.75

gcgaaatagtggggaaaaacccctggttaacc	CRISPR spacer
tttcaatattggggaaaaacccctcgttacct	Protospacer
 .  **** *************** **** *.

68. spacer 1.8|3067429|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016489 (Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75

tatccacatatacccgcaatcatattcaagaa	CRISPR spacer
ggtaaatctaaacccgcaatcatattcaagag	Protospacer
 .*  *. ** ********************.

69. spacer 1.8|3067429|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

tatccacatatacccgcaatcatattcaagaa	CRISPR spacer
ggtaaatctaaacccgcaatcatattcaagag	Protospacer
 .*  *. ** ********************.

70. spacer 1.19|3068097|32|NZ_CP019649|PILER-CR matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggtaatttctcatctaacagcct-----gtacgcctc	CRISPR spacer
ggtaatttcgcatcaaacagccttattagtat-----	Protospacer
********* **** ********     ***.

71. spacer 1.23|3068341|32|NZ_CP019649|PILER-CR matches to AP013976 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

72. spacer 1.23|3068341|32|NZ_CP019649|PILER-CR matches to JX536274 (Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

73. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcgacgacgctt	Protospacer
***********************.....* .

74. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.75

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actgggtctgggtctcggtctcggtctcggtt------	Protospacer
      *** *********************

75. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to JQ807255 (Environmental Halophage eHP-36, partial genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtctcggttccagtg	Protospacer
. ***********************  ....*

76. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgcggtc	Protospacer
 *** ********.*********** *.*..

77. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcggcctcggcctcggtctcggcc	Protospacer
.***********.*****.******  .*.*

78. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

79. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

80. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

81. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

82. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

83. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

84. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

85. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

86. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

87. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

88. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MT701595 (Streptomyces phage Shaeky, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggtgtcctcg	Protospacer
.*****.*****.************. .  **

89. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

90. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccttcg	Protospacer
*.************  *********. .  **

91. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

92. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

93. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attccgtctcggtctcggtcttggtgctgtag	Protospacer
 .** ****************.***. **  *

94. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MG269973 (TM7 phage DolZOral124_53_65, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg-----	CRISPR spacer
gctcggtctcggtttcggtttcg-----gacgcttgt	Protospacer
 ************.*****.***     ****

95. spacer 1.32|3068891|32|NZ_CP019649|PILER-CR matches to MK524494 (Mycobacterium phage Rabbs, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

96. spacer 1.32|3068891|32|NZ_CP019649|PILER-CR matches to KX641266 (Mycobacterium phage Terror, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

97. spacer 1.32|3068891|32|NZ_CP019649|PILER-CR matches to NC_031102 (Mycobacterium phage Sneeze, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

98. spacer 1.32|3068891|32|NZ_CP019649|PILER-CR matches to KX641265 (Mycobacterium phage Taheera, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

99. spacer 1.32|3068891|32|NZ_CP019649|PILER-CR matches to NC_014811 (Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
agggagactccggcgttgatcagcgcggtggc	Protospacer
 * .* * **** ****.*************

100. spacer 1.41|3068082|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggtaatttctcatctaacagcct-----gtacgcctc	CRISPR spacer
ggtaatttcgcatcaaacagccttattagtat-----	Protospacer
********* **** ********     ***.

101. spacer 1.45|3068326|32|NZ_CP019649|CRT,CRISPRCasFinder matches to AP013976 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

102. spacer 1.45|3068326|32|NZ_CP019649|CRT,CRISPRCasFinder matches to JX536274 (Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

103. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcgacgacgctt	Protospacer
***********************.....* .

104. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.75

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actgggtctgggtctcggtctcggtctcggtt------	Protospacer
      *** *********************

105. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to JQ807255 (Environmental Halophage eHP-36, partial genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtctcggttccagtg	Protospacer
. ***********************  ....*

106. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgcggtc	Protospacer
 *** ********.*********** *.*..

107. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcggcctcggcctcggtctcggcc	Protospacer
.***********.*****.******  .*.*

108. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

109. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

110. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

111. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

112. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

113. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

114. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

115. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

116. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

117. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

118. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MT701595 (Streptomyces phage Shaeky, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggtgtcctcg	Protospacer
.*****.*****.************. .  **

119. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

120. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccttcg	Protospacer
*.************  *********. .  **

121. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

122. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

123. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attccgtctcggtctcggtcttggtgctgtag	Protospacer
 .** ****************.***. **  *

124. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MG269973 (TM7 phage DolZOral124_53_65, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg-----	CRISPR spacer
gctcggtctcggtttcggtttcg-----gacgcttgt	Protospacer
 ************.*****.***     ****

125. spacer 1.54|3068876|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MK524494 (Mycobacterium phage Rabbs, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

126. spacer 1.54|3068876|32|NZ_CP019649|CRT,CRISPRCasFinder matches to KX641266 (Mycobacterium phage Terror, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

127. spacer 1.54|3068876|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_031102 (Mycobacterium phage Sneeze, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

128. spacer 1.54|3068876|32|NZ_CP019649|CRT,CRISPRCasFinder matches to KX641265 (Mycobacterium phage Taheera, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

129. spacer 1.54|3068876|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_014811 (Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
agggagactccggcgttgatcagcgcggtggc	Protospacer
 * .* * **** ****.*************

130. spacer 2.8|3085523|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75

taacgaactgaataaaatgtcagaaagtgacg	CRISPR spacer
ggcagaactgaataaaatgtctgatagtgaat	Protospacer
 .  ***************** ** *****

131. spacer 2.8|3085523|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

taacgaactgaataaaatgtcagaaagtgacg	CRISPR spacer
aaatgaactgaatacaatgtcagacacgcgcg	Protospacer
 **.********** ********* *   .**

132. spacer 2.13|3085829|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to LQ277707 (Sequence 2 from Patent WO2016071503) position: , mismatch: 8, identity: 0.75

----gctcatgtcaaacgccatcagcgttccggcat	CRISPR spacer
aaaggct----gcaaacgccaatagcgttccggcaa	Protospacer
    ***     ********* .************

133. spacer 2.13|3085829|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to LZ998055 (JP 2017534684-A/2: Phage Therapy) position: , mismatch: 8, identity: 0.75

----gctcatgtcaaacgccatcagcgttccggcat	CRISPR spacer
aaaggct----gcaaacgccaatagcgttccggcaa	Protospacer
    ***     ********* .************

134. spacer 2.14|3085890|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to CP001770 (Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence) position: , mismatch: 8, identity: 0.75

aatcgccagcctcggaaatattccatcctccg	CRISPR spacer
ggttgccagccccggaagtattccatctccca	Protospacer
..*.*******.*****.*********..**.

135. spacer 1.15|3067853|32|NZ_CP019649|PILER-CR matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcatccagcgccggtagtgccggatgaactca	Protospacer
 **   **.************ *******

136. spacer 1.22|3068280|32|NZ_CP019649|PILER-CR matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719

tcccattcaccaacaacaatatcgccctgcaa----	CRISPR spacer
ccccaatcaccaacaataatatcgt----cagtgtt	Protospacer
.**** **********.*******.    **.

137. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP028537 (Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

138. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_AP023191 (Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

139. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MN539017 (Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

140. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MN539018 (Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

141. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MT077888 (Escherichia coli plasmid p65, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

142. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NC_009838 (Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

143. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP044306 (Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

144. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP039170 (Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

145. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to CP048299 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

146. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to CP048303 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

147. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP037959 (Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

148. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP039861 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

149. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP048776 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

150. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NC_019114 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

151. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_AP023198 (Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

152. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

153. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

154. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP027411 (Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

155. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to JQ807227 (Environmental Halophage eHP-6, partial genome) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtcccggttccagtg	Protospacer
. ******************.****  ....*

156. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggtctcggcctcggcgtcggtg	Protospacer
.*****.***********.*****.. .*..*

157. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcggtctcagtctcggtctcagtctcgcgt	Protospacer
 *********.***********.**  .*

158. spacer 1.37|3067838|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcatccagcgccggtagtgccggatgaactca	Protospacer
 **   **.************ *******

159. spacer 1.44|3068265|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719

tcccattcaccaacaacaatatcgccctgcaa----	CRISPR spacer
ccccaatcaccaacaataatatcgt----cagtgtt	Protospacer
.**** **********.*******.    **.

160. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP028537 (Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

161. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_AP023191 (Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

162. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MN539017 (Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

163. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MN539018 (Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

164. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MT077888 (Escherichia coli plasmid p65, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

165. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_009838 (Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

166. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP044306 (Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

167. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP039170 (Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

168. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to CP048299 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

169. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to CP048303 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

170. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP037959 (Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

171. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP039861 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

172. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP048776 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

173. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_019114 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

174. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_AP023198 (Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

175. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

176. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

177. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP027411 (Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

178. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to JQ807227 (Environmental Halophage eHP-6, partial genome) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtcccggttccagtg	Protospacer
. ******************.****  ....*

179. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggtctcggcctcggcgtcggtg	Protospacer
.*****.***********.*****.. .*..*

180. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcggtctcagtctcggtctcagtctcgcgt	Protospacer
 *********.***********.**  .*

181. spacer 2.10|3085646|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051686 (Duganella sp. GN2-R2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgccagtgactacagaagcgtcgctatcgggg	CRISPR spacer
cacgcctgactaccgaagtgtcgctatcggac	Protospacer
..*   ******* ****.***********.

182. spacer 2.15|3085951|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to MN062720 (Microbacterium phage FuzzBuster, complete genome) position: , mismatch: 9, identity: 0.719

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
tcctcctggacaggctgaccgttgacgatctg	Protospacer
     **..**** *********** ******

183. spacer 2.16|3086012|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 9, identity: 0.719

accggacaaatcttttttttcctgttcctgtt	CRISPR spacer
gcatcattaatcctttttttcctgttactgta	Protospacer
.*   *. ****.************* ****

184. spacer 2.19|3086195|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cagtttgctgaactgctcggcgctgatgccgg	Protospacer
 .*. .  ***** * ****************

185. spacer 2.19|3086195|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cctgacggtgaaccggtcggcgctgatgccgc	Protospacer
    ** .***** *.***************

186. spacer 2.19|3086195|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cagggcgtcgaactgatcggcgctcatgccgg	Protospacer
 .* .*  .**** ********** *******

187. spacer 2.20|3086256|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaagccacaccattttttattgacctcgc	CRISPR spacer
tctgaaaccacaccattttttgttgaccctaa	Protospacer
  *.**.**************.******...

188. spacer 2.20|3086256|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaagccacaccattttttattgacctcgc	CRISPR spacer
tctgaaaccacaccattttttgttgaccctaa	Protospacer
  *.**.**************.******...

189. spacer 1.1|3067002|32|NZ_CP019649|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

190. spacer 1.1|3067002|32|NZ_CP019649|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

191. spacer 1.13|3067731|32|NZ_CP019649|PILER-CR matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 10, identity: 0.688

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cacctggatgggggccacatcgccgaacgagt	Protospacer
..  . ******* * ************* *

192. spacer 1.22|3068280|32|NZ_CP019649|PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

193. spacer 1.22|3068280|32|NZ_CP019649|PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

194. spacer 1.22|3068280|32|NZ_CP019649|PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

195. spacer 1.22|3068280|32|NZ_CP019649|PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

196. spacer 1.22|3068280|32|NZ_CP019649|PILER-CR matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

197. spacer 1.23|3068341|32|NZ_CP019649|PILER-CR matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.688

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
tcaaacgccaggttgatcaagtgcgtcagatt	Protospacer
.   .**.********** **********

198. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_KY689633 (Escherichia coli strain 100R plasmid p100R, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

199. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_KY689632 (Escherichia coli strain 19-M12 plasmid p19M12, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

200. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP045446 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

201. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_KU743384 (Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

202. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_KU254578 (Escherichia coli strain YD786 plasmid pYD786-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

203. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_KX129782 (Escherichia coli strain S38 plasmid pS38, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

204. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP015833 (Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

205. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to LT221036 (Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

206. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to CP019195 (Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

207. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP045449 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

208. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP015096 (Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcgtcctcggtctcggcctcggtc------	Protospacer
      ***** .***********.******

209. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to MN732922 (Escherichia coli strain 49K plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

210. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP020493 (Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

211. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to CP031284 (Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

212. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to CP042895 (Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

213. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP022735 (Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

214. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to CP042898 (Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

215. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP022165 (Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

216. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP012931 (Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

217. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP023143 (Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

218. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP026936 (Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

219. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP025402 (Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

220. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP026933 (Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

221. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_MH924589 (Escherichia coli strain RDB9 plasmid pRDB9, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

222. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_MH208235 (Escherichia coli strain APECA2 plasmid pJMA2, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

223. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_MK169211 (Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

224. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP016838 (Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

225. spacer 1.24|3068402|32|NZ_CP019649|PILER-CR matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cgcgcagcccggtctcggtctcggttgtggcg	Protospacer
. .  . *.**************** ***.**

226. spacer 1.35|3067716|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 10, identity: 0.688

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cacctggatgggggccacatcgccgaacgagt	Protospacer
..  . ******* * ************* *

227. spacer 1.44|3068265|32|NZ_CP019649|CRT,CRISPRCasFinder matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

228. spacer 1.44|3068265|32|NZ_CP019649|CRT,CRISPRCasFinder matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

229. spacer 1.44|3068265|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

230. spacer 1.44|3068265|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

231. spacer 1.44|3068265|32|NZ_CP019649|CRT,CRISPRCasFinder matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

232. spacer 1.45|3068326|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.688

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
tcaaacgccaggttgatcaagtgcgtcagatt	Protospacer
.   .**.********** **********

233. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_KY689633 (Escherichia coli strain 100R plasmid p100R, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

234. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_KY689632 (Escherichia coli strain 19-M12 plasmid p19M12, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

235. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP045446 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

236. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_KU743384 (Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

237. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_KU254578 (Escherichia coli strain YD786 plasmid pYD786-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

238. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_KX129782 (Escherichia coli strain S38 plasmid pS38, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

239. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP015833 (Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

240. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to LT221036 (Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

241. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to CP019195 (Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

242. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP045449 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

243. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP015096 (Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcgtcctcggtctcggcctcggtc------	Protospacer
      ***** .***********.******

244. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to MN732922 (Escherichia coli strain 49K plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

245. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP020493 (Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

246. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to CP031284 (Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

247. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to CP042895 (Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

248. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP022735 (Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

249. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to CP042898 (Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

250. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP022165 (Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

251. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP012931 (Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

252. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP023143 (Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

253. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP026936 (Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

254. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP025402 (Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

255. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP026933 (Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

256. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_MH924589 (Escherichia coli strain RDB9 plasmid pRDB9, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

257. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_MH208235 (Escherichia coli strain APECA2 plasmid pJMA2, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

258. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_MK169211 (Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

259. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP016838 (Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

260. spacer 1.46|3068387|32|NZ_CP019649|CRT,CRISPRCasFinder matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cgcgcagcccggtctcggtctcggttgtggcg	Protospacer
. .  . *.**************** ***.**

261. spacer 2.1|3085096|32|NZ_CP019649|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atcttcatattgcgtgacgctgccgatgaacg	CRISPR spacer
tgccggatatggcgtgacgatgccgatgatgt	Protospacer
  *.  **** ******** *********

262. spacer 2.4|3085279|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tgcccgttctgcctcttcgcactctcgatcaa	CRISPR spacer
tgcccgttctgtctcttggcactgccaccttc	Protospacer
***********.***** ***** .*. ..

263. spacer 2.15|3085951|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019257 (Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

264. spacer 2.15|3085951|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019274 (Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

265. spacer 2.15|3085951|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019275 (Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

266. spacer 2.15|3085951|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019279 (Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

267. spacer 2.15|3085951|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

268. spacer 2.15|3085951|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NC_049342 (Escherichia phage 500465-1, complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

269. spacer 2.15|3085951|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to KY271398 (Klebsiella phage 4 LV-2017, complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

270. spacer 2.15|3085951|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to CP025900 (Escherichia phage sp., complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

271. spacer 2.19|3086195|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 11, identity: 0.656

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
atagactaggagcggatcggcgctgatcggaa	Protospacer
. . **** **.***************   ..

272. spacer 2.19|3086195|32|NZ_CP019649|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 11, identity: 0.656

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
atagactaggagcggatcggcgctgatcggaa	Protospacer
. . **** **.***************   ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

366162 : 378164

Enterobacteria_phage(33.33%)

integrase

attL 354969:354982|attR 373469:373482

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
354969:354982	attL	NA	NA	NA	NA
WP_001043675.1\|366162_367215_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.7e-112	58.5
WP_001285275.1\|367497_368601_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	39.8
WP_000893231.1\|368612_369863_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.6e-98	47.5
WP_001529718.1\|370219_371434_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	9.7e-133	56.5
WP_000035054.1\|371862_372066_+	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	4.7e-08	50.9
WP_001529719.1\|372065_372497_+	hypothetical protein	A0A1W6JPH9	Morganella_phage	3.9e-28	49.0
WP_033567214.1\|372509_373343_+	antA/AntB antirepressor family protein	G9L6G1	Escherichia_phage	9.0e-21	47.5
WP_000476150.1\|373335_373518_+	DUF4222 domain-containing protein	NA	NA	NA	NA
373469:373482	attR	NA	NA	NA	NA
WP_032150717.1\|373511_374540_+	ash family protein	Q8W643	Enterobacteria_phage	1.0e-13	53.3
WP_001065738.1\|374532_374727_+	hypothetical protein	NA	NA	NA	NA
WP_001024675.1\|374723_374987_+	hypothetical protein	NA	NA	NA	NA
WP_000181940.1\|374983_375205_+	hypothetical protein	NA	NA	NA	NA
WP_001529721.1\|375197_375800_+	hypothetical protein	NA	NA	NA	NA
WP_001529722.1\|375812_378164_+	hypothetical protein	A0A1W6JPG0	Morganella_phage	6.8e-74	48.5

DBSCAN-SWA_2

996734 : 1005466

Dickeya_phage(14.29%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001201751.1\|996734_997853_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9
WP_000125877.1\|997849_999796_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
WP_000447499.1\|999925_1000147_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000520789.1\|1000470_1000791_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000934063.1\|1000821_1003098_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000502119.1\|1003289_1003748_+\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
WP_085983316.1\|1004210_1005466_-\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	5.4e-17	33.9

DBSCAN-SWA_3

1055529 : 1146446

Salmonella_phage(58.7%)

terminase,protease,integrase,tRNA,holin,lysis,tail

attL 1058438:1058457|attR 1122334:1122353

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001154025.1\|1055529_1056333_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_051120049.1\|1056325_1057648_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_000060025.1\|1057628_1058333_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_000572724.1\|1058332_1062799_+	chromosome partition protein MukB	NA	NA	NA	NA
1058438:1058457	attL	NA	NA	NA	NA
WP_000925872.1\|1063143_1064985_+	L,D-transpeptidase	NA	NA	NA	NA
WP_000357052.1\|1065244_1065793_+	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	1.2e-05	33.7
WP_001109471.1\|1065820_1066468_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_000462653.1\|1066529_1067720_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_000977713.1\|1067904_1068996_-	porin OmpF	Q1MVN1	Enterobacteria_phage	2.2e-99	51.7
WP_000117870.1\|1069602_1071003_-\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
WP_000762342.1\|1071203_1071665_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_000544849.1\|1071981_1073196_+	diaminopropionate ammonia-lyase	NA	NA	NA	NA
WP_000893207.1\|1073440_1074877_+	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_000191399.1\|1074954_1076157_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_020899445.1\|1076351_1077644_-\|integrase	site-specific integrase	S4TSP2	Salmonella_phage	4.5e-253	99.8
WP_000065276.1\|1077688_1077937_-	excisionase family protein	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_001237031.1\|1077977_1078217_-	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_014344386.1\|1078259_1079417_-	recombinase RecT	S4TTE8	Salmonella_phage	7.9e-217	99.7
WP_020899444.1\|1079379_1082580_-	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	78.8
WP_023139985.1\|1082706_1083057_-	hypothetical protein	S4TSN6	Salmonella_phage	3.5e-59	94.0
WP_000917559.1\|1083105_1083237_-	hypothetical protein	H6WRX3	Salmonella_phage	1.2e-17	97.7
WP_000981510.1\|1083533_1083968_-	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	2.5e-14	38.2
WP_001555460.1\|1084073_1084301_+	transcriptional regulator	H6WRX5	Salmonella_phage	1.7e-14	45.9
WP_000426364.1\|1084335_1084656_+	hypothetical protein	A0A0M4RU01	Salmonella_phage	1.3e-52	100.0
WP_000062943.1\|1084740_1085724_+	hypothetical protein	H6WRX7	Salmonella_phage	2.1e-162	99.3
WP_000800012.1\|1085726_1086476_+	ATP-binding protein	S4TNF5	Salmonella_phage	4.3e-139	100.0
WP_020899441.1\|1086486_1086834_+	DUF977 family protein	H6WRX9	Salmonella_phage	1.8e-52	90.4
WP_000065109.1\|1086830_1087289_+	ead/Ea22-like family protein	S4TNP2	Salmonella_phage	7.1e-44	77.4
WP_000850457.1\|1087292_1087601_+	hypothetical protein	A0A1P8DTP0	Salmonella_phage	1.8e-30	69.3
WP_000208142.1\|1087604_1088249_+	hypothetical protein	H6WRY2	Salmonella_phage	1.8e-29	40.7
WP_001536080.1\|1088248_1088506_+	hypothetical protein	NA	NA	NA	NA
WP_000493384.1\|1088560_1089538_-	DUF4868 domain-containing protein	NA	NA	NA	NA
WP_022630855.1\|1089549_1090146_-	hypothetical protein	NA	NA	NA	NA
WP_000861985.1\|1090737_1090971_+	DinI-like family protein	A0A0M4REN2	Salmonella_phage	1.2e-31	87.0
WP_000763780.1\|1091080_1091302_+	hypothetical protein	NA	NA	NA	NA
WP_000929788.1\|1091386_1091989_+	DUF1367 family protein	A0A0M4QX23	Salmonella_phage	7.5e-110	99.0
WP_001096542.1\|1092197_1092809_+	hypothetical protein	A0A0M4RU10	Salmonella_phage	2.7e-91	98.0
WP_000801757.1\|1092805_1092946_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
WP_001097242.1\|1092942_1093632_+	antitermination protein	I6PDF8	Cronobacter_phage	1.1e-59	50.6
WP_001534733.1\|1093826_1093952_+	hypothetical protein	NA	NA	NA	NA
WP_000798705.1\|1094087_1094537_-	hypothetical protein	NA	NA	NA	NA
WP_001141973.1\|1094897_1095584_-\|protease	type III secretion system effector protease GtgA	Q9MBM0	Phage_Gifsy-2	2.1e-132	100.0
WP_077248428.1\|1095859_1096189_+\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	2.9e-55	99.1
WP_000984584.1\|1096172_1096625_+	lysozyme	A0A0M4R365	Salmonella_phage	7.9e-80	98.0
WP_024143045.1\|1096642_1097089_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	1.2e-64	90.4
WP_000867564.1\|1097557_1098103_+\|terminase	terminase small subunit	K7P7G0	Enterobacteria_phage	4.5e-53	61.3
WP_020899435.1\|1099223_1099556_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	4.4e-35	61.5
WP_000725267.1\|1099655_1100153_+	outer membrane beta-barrel protein	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
WP_000877926.1\|1100269_1100803_-	superoxide dismutase [Cu-Zn]	Q9MC02	Salmonella_phage	1.8e-46	54.0
WP_001152415.1\|1100892_1101588_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.3e-89	66.7
WP_000606351.1\|1101597_1102335_+\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.6e-114	76.1
WP_001576012.1\|1102232_1102937_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.4e-67	63.1
WP_000033415.1\|1103008_1106359_+	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	68.6
WP_000178849.1\|1106397_1106640_+	hypothetical protein	NA	NA	NA	NA
WP_031247858.1\|1106693_1109132_+\|tail	tail protein	A0A0K2FIZ6	Escherichia_phage	7.5e-92	63.8
WP_000143167.1\|1109131_1109713_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-95	89.5
WP_001674638.1\|1110188_1111157_+	SPI-2 type III secretion system effector SseI	Q9MBL9	Phage_Gifsy-2	3.0e-193	99.4
WP_000334547.1\|1111804_1112431_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-66	63.2
WP_031603423.1\|1112499_1112799_-	hypothetical protein	NA	NA	NA	NA
WP_001525490.1\|1112783_1113470_-	hypothetical protein	NA	NA	NA	NA
WP_000497441.1\|1113740_1113932_-	DinI-like family protein	S4TNM0	Salmonella_phage	6.2e-26	95.2
WP_000193784.1\|1114358_1116971_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.6
WP_000291723.1\|1117178_1118189_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_001220671.1\|1118354_1118897_+	cell division protein ZapC	NA	NA	NA	NA
WP_000224069.1\|1118893_1120003_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_001086485.1\|1120101_1122210_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_000053044.1\|1122222_1124130_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
1122334:1122353	attR	NA	NA	NA	NA
WP_000333152.1\|1124144_1125398_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
WP_000433414.1\|1125402_1127043_+	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_033567177.1\|1127039_1127603_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_001537784.1\|1127858_1128026_+	ribosome modulation factor	NA	NA	NA	NA
WP_000227928.1\|1128125_1128644_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_000156454.1\|1128712_1130473_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000877172.1\|1130658_1131111_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_001674965.1\|1131182_1132235_-	porin OmpA	NA	NA	NA	NA
WP_000288732.1\|1132591_1133101_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_001202375.1\|1133317_1133923_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_000950880.1\|1133909_1136063_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001261222.1\|1136081_1136528_-	YccF domain-containing protein	NA	NA	NA	NA
WP_000420505.1\|1136651_1138706_+	DNA helicase IV	A7KV33	Bacillus_phage	8.5e-20	27.6
WP_000424187.1\|1138741_1139200_-	methylglyoxal synthase	NA	NA	NA	NA
WP_000847719.1\|1139294_1139957_-	DUF2057 family protein	NA	NA	NA	NA
WP_000975203.1\|1140127_1140544_+	CoA-binding protein	NA	NA	NA	NA
WP_000561983.1\|1140588_1140906_-	heat shock protein HspQ	NA	NA	NA	NA
WP_000140480.1\|1140963_1142175_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000859419.1\|1142389_1142938_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_000548082.1\|1142963_1143743_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000072884.1\|1143791_1144073_+	acylphosphatase	NA	NA	NA	NA
WP_000904446.1\|1144069_1144399_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_000374050.1\|1144485_1145145_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.3e-43	51.9
WP_000938191.1\|1145765_1146446_-\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	8.3e-81	70.6

DBSCAN-SWA_4

1933530 : 1940339

Salmonella_phage(33.33%)

integrase,tail

attL 1928393:1928415|attR 1938108:1938130

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1928393:1928415	attL	NA	NA	NA	NA
WP_000275418.1\|1933530_1934412_-\|tail	tail assembly protein	A0A0M4RTP2	Salmonella_phage	2.2e-65	76.0
WP_001521334.1\|1934884_1935073_+	hypothetical protein	NA	NA	NA	NA
WP_000789530.1\|1935137_1935305_+	lytic enzyme	NA	NA	NA	NA
WP_001050882.1\|1935561_1936095_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	1.4e-11	48.3
WP_001013467.1\|1936148_1936379_-	hypothetical protein	Q8HA86	Salmonella_phage	6.1e-28	93.7
WP_010989030.1\|1936568_1937063_+	hypothetical protein	A0A0U2I1R6	Escherichia_phage	8.2e-22	68.9
WP_001520095.1\|1937122_1937977_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	3.6e-73	50.9
WP_000722368.1\|1938350_1938704_-	YebY family protein	NA	NA	NA	NA
1938108:1938130	attR	NA	NA	NA	NA
WP_000979702.1\|1938720_1939596_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_000168393.1\|1939596_1939971_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_000856224.1\|1940108_1940339_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3

DBSCAN-SWA_5

2015786 : 2095067

105

Salmonella_phage(76.81%)

terminase,portal,plate,transposase,head,capsid,protease,integrase,holin,tail

attL 2022324:2022339|attR 2096690:2096705

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000502119.1\|2015786_2016245_-\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
WP_000659236.1\|2016425_2017631_-	lysine-N-methylase	NA	NA	NA	NA
WP_000079806.1\|2017709_2019197_-	flagellin FliC	NA	NA	NA	NA
WP_000146802.1\|2019453_2020857_+	flagellar filament capping protein FliD	NA	NA	NA	NA
WP_000287764.1\|2020871_2021279_+	flagellar export chaperone FliS	NA	NA	NA	NA
WP_000204899.1\|2021278_2021647_+	flagella biosynthesis regulatory protein FliT	NA	NA	NA	NA
WP_022630963.1\|2021718_2023203_+	alpha-amylase	NA	NA	NA	NA
2022324:2022339	attL	NA	NA	NA	NA
WP_000754695.1\|2023242_2023668_-	lipoprotein	NA	NA	NA	NA
WP_001535233.1\|2023853_2025059_+	selenium metabolism membrane protein YedE/FdhT	NA	NA	NA	NA
WP_000790504.1\|2025055_2025289_+	sulfurtransferase-like selenium metabolism protein YedF	NA	NA	NA	NA
WP_000639596.1\|2025553_2025940_+	hypothetical protein	NA	NA	NA	NA
WP_000719036.1\|2026059_2026374_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_001276834.1\|2026590_2028273_+	flagellar basal body M-ring protein FliF	NA	NA	NA	NA
WP_000067735.1\|2028265_2029261_+	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_000064163.1\|2029253_2029961_+	flagellar assembly protein FliH	NA	NA	NA	NA
WP_000213257.1\|2029960_2031331_+	flagellum-specific ATP synthase FliI	NA	NA	NA	NA
WP_000046981.1\|2031352_2031796_+	flagella biosynthesis chaperone FliJ	NA	NA	NA	NA
WP_000631669.1\|2031792_2033010_+	flagellar hook length control protein FliK	NA	NA	NA	NA
WP_000132169.1\|2033114_2033582_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_000502811.1\|2033586_2034591_+	flagellar motor switch protein FliM	NA	NA	NA	NA
WP_001282115.1\|2034587_2035001_+	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_000978276.1\|2035000_2035378_+	flagellar type III secretion system protein FliO	NA	NA	NA	NA
WP_001253410.1\|2035377_2036115_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_000187355.1\|2036124_2036394_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_000616953.1\|2036402_2037197_+	flagellar type III secretion system protein FliR	NA	NA	NA	NA
WP_000103974.1\|2037478_2038102_+	transcriptional regulator RcsA	NA	NA	NA	NA
WP_071524019.1\|2038140_2038389_-	protein DsrB	NA	NA	NA	NA
WP_000844798.1\|2038463_2038691_+	YodD family peroxide/acid resistance protein	NA	NA	NA	NA
WP_000948794.1\|2039000_2039816_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
WP_001119821.1\|2039794_2041507_-	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	1.2e-19	37.4
WP_001178599.1\|2041671_2041917_-	YodC family protein	NA	NA	NA	NA
WP_000929134.1\|2041933_2042845_-	DUF808 domain-containing protein	NA	NA	NA	NA
WP_001212264.1\|2043020_2043941_+	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_000785978.1\|2043929_2044400_-	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	1.2e-30	46.9
WP_001157322.1\|2044380_2045811_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4
WP_000377041.1\|2045884_2046580_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_000107430.1\|2046671_2046971_-	membrane protein	NA	NA	NA	NA
WP_001080680.1\|2047620_2048817_+	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.8e-110	56.1
WP_024131109.1\|2049077_2049266_-	hypothetical protein	NA	NA	NA	NA
WP_000208509.1\|2049276_2049489_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_000457662.1\|2049943_2051212_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	4.2e-227	92.2
WP_000394196.1\|2051214_2051634_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_000500831.1\|2051760_2051922_-	hypothetical protein	NA	NA	NA	NA
WP_001093793.1\|2053115_2053328_+	hypothetical protein	A0A192Y5V6	Salmonella_phage	2.7e-30	100.0
WP_000842532.1\|2053324_2053738_+	hypothetical protein	A0A192Y6F0	Salmonella_phage	2.9e-73	100.0
WP_122815478.1\|2053785_2053899_+	hypothetical protein	A0A1C9IHU6	Salmonella_phage	4.3e-11	100.0
WP_000836773.1\|2053973_2054207_+	hypothetical protein	A0A192Y6D5	Salmonella_phage	1.2e-36	100.0
WP_022742744.1\|2054320_2054926_-\|tail	tail fiber assembly protein	A0A192Y8L2	Salmonella_phage	2.7e-107	100.0
WP_000554735.1\|2054895_2056458_-	hypothetical protein	A0A192Y7M1	Salmonella_phage	1.7e-283	98.5
WP_001207832.1\|2056444_2057032_-	DUF2313 domain-containing protein	A0A192Y5V3	Salmonella_phage	2.9e-114	100.0
WP_000785581.1\|2057034_2058114_-\|plate	baseplate J/gp47 family protein	A0A192Y6E4	Salmonella_phage	7.2e-204	99.2
WP_000605055.1\|2058106_2058520_-	hypothetical protein	A0A192Y6D0	Salmonella_phage	1.2e-74	99.3
WP_001273649.1\|2058524_2059058_-\|plate	phage baseplate assembly protein	Q8HAB9	Salmonella_phage	1.4e-96	100.0
WP_001066632.1\|2059057_2060116_-\|plate	baseplate protein	A0A192Y7L7	Salmonella_phage	3.0e-202	99.7
WP_033567259.1\|2060112_2061453_-	DNA circularization protein	A0A192Y5U9	Salmonella_phage	9.7e-251	99.3
WP_001033736.1\|2061512_2061962_-	hypothetical protein	NA	NA	NA	NA
WP_000785381.1\|2061978_2063904_-\|tail	phage tail tape measure protein	Q8HAC2	Salmonella_phage	0.0e+00	97.3
WP_000588852.1\|2063988_2064315_-\|tail	phage tail assembly protein	Q8HAC3	Salmonella_phage	2.3e-52	99.1
WP_000515953.1\|2064311_2064668_-\|tail	tail protein	A0A192Y8K0	Salmonella_phage	1.3e-61	99.2
WP_033567258.1\|2064667_2066164_-\|tail	tail sheath protein	Q8HAC5	Salmonella_phage	3.0e-277	99.4
WP_065305283.1\|2066153_2066318_-	DUF2635 domain-containing protein	Q8HAC6	Salmonella_phage	7.1e-23	94.4
WP_000779213.1\|2066339_2066897_-	hypothetical protein	A0A192Y5U4	Salmonella_phage	1.1e-96	93.4
WP_033567257.1\|2066893_2067406_-	hypothetical protein	Q8HAC8	Salmonella_phage	1.6e-81	87.6
WP_033567256.1\|2067377_2067782_-\|head	phage head closure protein	A0A192Y6C2	Salmonella_phage	3.7e-52	74.6
WP_000927721.1\|2067778_2068102_-\|head,tail	phage gp6-like head-tail connector protein	U5P072	Shigella_phage	2.4e-54	97.2
WP_033572442.1\|2068104_2068305_-	hypothetical protein	S5FNU1	Shigella_phage	5.8e-27	98.5
WP_033572441.1\|2068354_2069560_-\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	9.4e-221	98.0
WP_033567207.1\|2069574_2070225_-\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	3.1e-117	97.7
WP_000466255.1\|2070202_2071444_-\|portal	phage portal protein	U5P411	Shigella_phage	2.0e-242	99.8
WP_000605609.1\|2071443_2071626_-	hypothetical protein	Q8HAD5	Salmonella_phage	1.0e-25	100.0
WP_033567282.1\|2071637_2073371_-\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	0.0e+00	99.5
WP_000929191.1\|2073367_2073862_-\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	4.6e-89	100.0
WP_001135098.1\|2073987_2074338_-	HNH endonuclease	M1FQV2	Enterobacteria_phage	9.8e-62	94.8
WP_001379492.1\|2074388_2074721_-	hypothetical protein	A0A192Y5Y1	Salmonella_phage	2.8e-58	100.0
WP_001530346.1\|2075183_2075576_-	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	2.8e-65	100.0
WP_001624504.1\|2075572_2076187_-	glycoside hydrolase family 19 protein	A0A192Y6G4	Salmonella_phage	5.7e-113	100.0
WP_000422366.1\|2076186_2076468_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	9.7e-20	45.2
WP_001283169.1\|2076454_2076841_-	membrane protein	A0A192Y8P2	Salmonella_phage	7.0e-61	100.0
WP_001624505.1\|2076986_2077244_-	hypothetical protein	A0A1C9IHX4	Salmonella_phage	3.1e-41	100.0
WP_020899401.1\|2077394_2078147_-	antitermination protein	A0A192Y5X6	Salmonella_phage	1.8e-145	100.0
WP_070793644.1\|2078160_2079150_-	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	2.1e-194	100.0
WP_001061452.1\|2079157_2080018_-	KilA-N domain-containing protein	A0A192Y6F8	Salmonella_phage	1.1e-162	100.0
WP_000779148.1\|2080034_2080424_-	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	4.9e-70	100.0
WP_033567232.1\|2080432_2081308_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	2.7e-169	99.3
WP_000054228.1\|2081304_2081778_-	PerC family transcriptional regulator	A0A1C9IHW0	Salmonella_phage	4.9e-56	100.0
WP_033567233.1\|2081774_2082749_-	protein phage	A0A1C9IHW0	Salmonella_phage	2.3e-169	100.0
WP_000620702.1\|2082745_2082970_-	hypothetical protein	A0A1C9II64	Salmonella_phage	3.3e-39	100.0
WP_001087404.1\|2082966_2084109_-	hypothetical protein	A0A1C9IHV9	Salmonella_phage	1.5e-212	100.0
WP_000509731.1\|2084105_2084660_-	hypothetical protein	A0A1C9II13	Salmonella_phage	6.9e-102	100.0
WP_001191666.1\|2084688_2084913_-	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.9e-34	100.0
WP_001020636.1\|2085010_2085706_+	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	3.2e-128	100.0
WP_001067432.1\|2085911_2086250_+	hypothetical protein	A0A1C9IHZ4	Salmonella_phage	7.0e-57	100.0
WP_023891434.1\|2086212_2086437_-	hypothetical protein	A0A1C9IHY8	Salmonella_phage	1.6e-33	100.0
WP_000997191.1\|2086976_2087348_+	hypothetical protein	A0A192Y6G0	Salmonella_phage	2.5e-63	100.0
WP_000080416.1\|2087405_2088233_+	YfdQ family protein	A0A192Y6E5	Salmonella_phage	2.6e-153	100.0
WP_000008351.1\|2088369_2088909_+	hypothetical protein	A0A192Y8M4	Salmonella_phage	2.6e-98	100.0
WP_000215886.1\|2088979_2089513_+	hypothetical protein	A0A192Y7N1	Salmonella_phage	2.5e-101	100.0
WP_000224241.1\|2089514_2089772_+	hypothetical protein	A0A192Y5W0	Salmonella_phage	1.3e-42	100.0
WP_020899398.1\|2089782_2090364_+	hypothetical protein	A0A192Y6F5	Salmonella_phage	4.7e-109	100.0
WP_001061334.1\|2090367_2090937_+	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	7.1e-110	100.0
WP_000414876.1\|2090961_2091204_+	DUF4224 domain-containing protein	Q8HAA9	Salmonella_phage	9.5e-40	100.0
WP_000532847.1\|2091205_2092195_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	8.6e-196	100.0
WP_000598920.1\|2092486_2093284_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_001738920.1\|2093655_2093946_+	DUF4102 domain-containing protein	H2BDA3	Pseudomonas_phage	3.0e-08	49.1
WP_001219015.1\|2094593_2095067_+	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	7.1e-39	77.6
2096690:2096705	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2181061 : 2191567

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000126349.1\|2181061_2182375_-	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1
WP_000565905.1\|2182401_2183481_-	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	6.6e-16	24.1
WP_000648784.1\|2183485_2184259_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000018226.1\|2184255_2185248_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000973708.1\|2185253_2185805_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	58.0
WP_000857529.1\|2185805_2186684_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.3e-109	65.5
WP_001023662.1\|2186731_2187631_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_000697840.1\|2187630_2188716_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
WP_000981469.1\|2189092_2189986_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_001111841.1\|2190163_2191567_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	27.1

DBSCAN-SWA_7

2259875 : 2269046

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195332.1\|2259875_2261909_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6
WP_000703137.1\|2262149_2262608_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_001197952.1\|2262779_2263310_+	YehR family lipoprotein	NA	NA	NA	NA
WP_000950413.1\|2263366_2263834_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_000598637.1\|2263880_2264600_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000272845.1\|2264596_2266282_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.1
WP_001240418.1\|2266504_2267236_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_001261696.1\|2267295_2267403_+	protein YohO	NA	NA	NA	NA
WP_000824855.1\|2267383_2268115_-	ABC transporter permease	NA	NA	NA	NA
WP_000569166.1\|2268098_2269046_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2

DBSCAN-SWA_8

2341098 : 2370571

Salmonella_phage(38.46%)

holin,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000806401.1\|2341098_2341602_-	LexA family transcriptional regulator	Q1MVE7	Enterobacteria_phage	9.5e-50	71.3
WP_000884778.1\|2341629_2341920_+	DinI family protein	S4TND2	Salmonella_phage	4.7e-25	83.3
WP_000639473.1\|2342267_2344097_+	acyltransferase	C6ZR20	Salmonella_phage	3.0e-61	29.6
WP_000022213.1\|2344150_2344594_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.4e-28	43.9
WP_125572651.1\|2344595_2344919_-	hypothetical protein	NA	NA	NA	NA
WP_001215679.1\|2344971_2345499_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	3.1e-11	31.3
WP_000554739.1\|2345501_2346743_-	hypothetical protein	Q8HAB4	Salmonella_phage	1.0e-52	95.3
WP_001120499.1\|2347335_2347665_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.9e-36	94.6
WP_000894640.1\|2347961_2349293_+	AAA family ATPase	R9TRQ8	Vibrio_phage	2.1e-19	28.5
WP_010989045.1\|2349321_2349690_-	antitermination protein Q	A5LH77	Enterobacteria_phage	7.4e-52	81.7
WP_001202279.1\|2349704_2350694_-	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	6.0e-189	97.3
WP_088631497.1\|2351022_2353269_-	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	Q9MBL9	Phage_Gifsy-2	2.7e-72	88.7
WP_001113462.1\|2353437_2353641_-\|tail	tail protein	NA	NA	NA	NA
WP_000624225.1\|2353937_2354729_-\|tail	tail protein	Q1MVL8	Enterobacteria_phage	1.7e-48	31.6
WP_001653202.1\|2355031_2355235_+	virulence protein MsgA	NA	NA	NA	NA
WP_000281877.1\|2355426_2355990_-	acyloxyacyl hydrolase	NA	NA	NA	NA
WP_001115498.1\|2356719_2357367_+	nitrate/nitrite response regulator protein NarP	NA	NA	NA	NA
WP_033572444.1\|2357410_2358454_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_000828296.1\|2358450_2359008_-	thiol:disulfide interchange protein DsbE	NA	NA	NA	NA
WP_000982518.1\|2359004_2360936_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_001053618.1\|2360932_2361412_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_000074110.1\|2361408_2361621_-	heme exporter protein CcmD	NA	NA	NA	NA
WP_000266008.1\|2361617_2362355_-	heme ABC transporter permease	NA	NA	NA	NA
WP_000990028.1\|2362406_2363066_-	heme exporter protein CcmB	NA	NA	NA	NA
WP_000888541.1\|2363062_2363680_-	cytochrome c biogenesis heme-transporting ATPase CcmA	A0A2H4PQG7	Staphylococcus_phage	2.2e-11	27.2
WP_000431778.1\|2363700_2364303_-	cytochrome c-type protein NapC	NA	NA	NA	NA
WP_000835182.1\|2364312_2364762_-	nitrate reductase cytochrome c-type subunit	NA	NA	NA	NA
WP_000013529.1\|2364877_2365747_-	quinol dehydrogenase ferredoxin subunit NapH	NA	NA	NA	NA
WP_000091673.1\|2365733_2366429_-	ferredoxin-type protein NapG	NA	NA	NA	NA
WP_000778097.1\|2366435_2368922_-	nitrate reductase catalytic subunit NapA	NA	NA	NA	NA
WP_001260058.1\|2368918_2369182_-	chaperone NapD	NA	NA	NA	NA
WP_000228070.1\|2369171_2369663_-	ferredoxin-type protein NapF	NA	NA	NA	NA
WP_000781589.1\|2370076_2370571_+\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA

DBSCAN-SWA_9

2694314 : 2800089

112

Salmonella_phage(40.0%)

terminase,portal,transposase,head,capsid,protease,integrase,tRNA,holin,lysis,tail

attL 2718859:2718875|attR 2807993:2808009

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000940032.1\|2694314_2695046_-\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA
WP_000553467.1\|2695164_2695968_+	inositol-1-monophosphatase	NA	NA	NA	NA
WP_000174944.1\|2696112_2696991_+	alpha/beta hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	3.5e-15	24.7
WP_000985204.1\|2697172_2698216_+	anaerobic sulfite reductase subunit A	NA	NA	NA	NA
WP_000017587.1\|2698219_2699038_+	anaerobic sulfite reductase subunit B	NA	NA	NA	NA
WP_000020685.1\|2699048_2700062_+	sulfite reductase subunit C	NA	NA	NA	NA
WP_000111027.1\|2700062_2701049_-	nickel/cobalt transporter	NA	NA	NA	NA
WP_000805728.1\|2701039_2701678_-	DUF1007 family protein	NA	NA	NA	NA
WP_000982961.1\|2701803_2703081_+	stationary phase inducible protein CsiE	NA	NA	NA	NA
WP_001173729.1\|2703075_2704215_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA
WP_000919178.1\|2704410_2705664_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.3e-100	53.0
WP_000883146.1\|2705988_2707179_+	NO-inducible flavohemoprotein	NA	NA	NA	NA
WP_001187150.1\|2707360_2708905_+	CadC family transcriptional regulator	NA	NA	NA	NA
WP_000100008.1\|2709265_2710597_+	cadaverine/lysine antiporter	NA	NA	NA	NA
WP_001100652.1\|2710679_2712824_+	lysine decarboxylase CadA	NA	NA	NA	NA
WP_000856793.1\|2712879_2714340_+	MFS transporter	A0A0P0IY73	Acinetobacter_phage	1.7e-46	28.8
WP_000717694.1\|2714388_2714727_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
WP_000625591.1\|2714803_2716141_-	two-component system response regulator GlrR	W8CYM9	Bacillus_phage	1.8e-10	29.2
WP_001054236.1\|2716137_2716902_-	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA
WP_001670672.1\|2716903_2718334_-	two component system sensor histidine kinase QseE/GlrK	W8CYF6	Bacillus_phage	2.0e-15	26.1
2718859:2718875	attL	NA	NA	NA	NA
WP_000970045.1\|2718983_2722871_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	1.4e-127	57.6
WP_001747289.1\|2722892_2723126_+	hypothetical protein	NA	NA	NA	NA
WP_000734248.1\|2723126_2724671_+	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA
WP_001134566.1\|2724721_2725273_-\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
WP_000253558.1\|2725297_2725933_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA
WP_000361663.1\|2725936_2727298_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_001048530.1\|2727308_2728202_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_000995703.1\|2728317_2729166_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_000684027.1\|2729204_2730122_-	oxidoreductase	NA	NA	NA	NA
WP_001276365.1\|2730143_2731340_-	OFA family MFS transporter	NA	NA	NA	NA
WP_001022463.1\|2731455_2732382_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.0e-09	24.4
WP_001196290.1\|2732419_2732680_+	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.4e-17	52.3
WP_000986043.1\|2732791_2733172_-	holo-ACP synthase	NA	NA	NA	NA
WP_000818972.1\|2733171_2733903_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_033567169.1\|2733914_2734643_-	DNA repair protein RecO	NA	NA	NA	NA
WP_000102232.1\|2734654_2735560_-	GTPase Era	NA	NA	NA	NA
WP_001068341.1\|2735556_2736237_-	ribonuclease III	A0A2K9L5P0	Tupanvirus	7.4e-21	31.8
WP_000002559.1\|2736510_2737485_-	signal peptidase I	NA	NA	NA	NA
WP_000790154.1\|2737501_2739301_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	7.2e-23	24.9
WP_010989047.1\|2739705_2741199_+	type III secretion effector GogB	Q9MBM1	Phage_Gifsy-1	3.4e-260	100.0
WP_001542312.1\|2741653_2741791_+	hypothetical protein	NA	NA	NA	NA
WP_015589559.1\|2742503_2742668_-\|transposase	transposase	NA	NA	NA	NA
WP_015701342.1\|2743247_2743313_-	DUF4113 domain-containing protein	NA	NA	NA	NA
WP_001738443.1\|2743375_2743588_-	helix-turn-helix domain-containing protein	S4TTF2	Salmonella_phage	3.8e-08	90.6
WP_010989049.1\|2743694_2743922_+	PagK-like protein	NA	NA	NA	NA
WP_000143154.1\|2744018_2744597_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.6e-93	88.9
WP_000593433.1\|2744586_2745411_-\|tail	tail protein	A0A0M4QWS3	Salmonella_phage	1.2e-145	92.0
WP_001144691.1\|2745407_2747780_-\|tail	tail protein	A0A0K2FIZ6	Escherichia_phage	1.1e-90	65.6
WP_000178853.1\|2747833_2748076_-	hypothetical protein	NA	NA	NA	NA
WP_000514917.1\|2748114_2751477_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	79.7
WP_000246126.1\|2751538_2752186_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-89	77.7
WP_000662739.1\|2752083_2752821_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
WP_001152689.1\|2752827_2753526_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	5.5e-104	76.3
WP_000447369.1\|2753535_2753865_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
WP_000372065.1\|2753867_2756963_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	1.7e-274	62.3
WP_010989052.1\|2756934_2757273_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
WP_000479607.1\|2757269_2757665_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
WP_077248250.1\|2757715_2758462_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.5
WP_000033885.1\|2758469_2758871_-\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
WP_000817263.1\|2758979_2760110_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	9.2e-218	100.0
WP_000677089.1\|2760158_2760737_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
WP_000083294.1\|2760764_2761148_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	9.2e-29	55.6
WP_000201486.1\|2761158_2761518_-	DNA packaging protein	NA	NA	NA	NA
WP_000522566.1\|2761575_2762604_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
WP_000011260.1\|2762658_2763006_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
WP_001189503.1\|2763018_2764515_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	8.1e-97	52.2
WP_000831821.1\|2764504_2766085_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	9.6e-189	62.8
WP_000201415.1\|2766081_2766285_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
WP_000623091.1\|2766268_2768200_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	6.3e-259	65.7
WP_001102153.1\|2768171_2768717_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
WP_000669690.1\|2769003_2769405_+	hypothetical protein	NA	NA	NA	NA
WP_001533543.1\|2769640_2770093_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	2.9e-66	92.7
WP_015701345.1\|2770110_2770563_-	lysozyme	A0A0M4R365	Salmonella_phage	1.0e-79	98.0
WP_001574216.1\|2770546_2770876_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
WP_001110783.1\|2771151_2771838_+\|protease	type III secretion system effector protease GogA	Q9MBM2	Phage_Gifsy-1	9.4e-133	100.0
WP_000657897.1\|2772052_2772241_-	hypothetical protein	NA	NA	NA	NA
WP_000211410.1\|2772747_2773311_-	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	7.6e-56	92.2
WP_001097241.1\|2773583_2774261_-	antitermination protein	I6PDF8	Cronobacter_phage	7.7e-63	54.0
WP_000801757.1\|2774257_2774398_-	YlcG family protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
WP_001096550.1\|2774394_2775006_-	recombination protein NinG	A0A0M4RU10	Salmonella_phage	1.2e-91	99.0
WP_001241017.1\|2775008_2775215_-	hypothetical protein	S4TNP0	Salmonella_phage	1.7e-34	97.1
WP_000929803.1\|2775214_2775817_-	DUF1367 family protein	S4TTI0	Salmonella_phage	1.1e-108	98.5
WP_001574100.1\|2775856_2776162_-	hypothetical protein	H6WRY6	Salmonella_phage	9.8e-42	100.0
WP_001217666.1\|2776151_2776391_-	DinI family protein	H6WRY5	Salmonella_phage	1.1e-37	98.7
WP_000445792.1\|2777255_2777729_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	1.6e-67	80.1
WP_000065105.1\|2777728_2778253_-	ead/Ea22-like family protein	A0A220NQV2	Salmonella_phage	1.8e-91	99.4
WP_000113623.1\|2778249_2778597_-	DUF977 family protein	H6WRX9	Salmonella_phage	4.8e-53	90.4
WP_000800010.1\|2778607_2779357_-	ATP-binding protein	S4TNF5	Salmonella_phage	3.6e-138	99.6
WP_000062941.1\|2779359_2780343_-	hypothetical protein	H6WRX7	Salmonella_phage	1.9e-163	100.0
WP_001574095.1\|2780427_2780802_-	hypothetical protein	S4TTD7	Salmonella_phage	3.9e-64	99.2
WP_000869364.1\|2780767_2781004_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.8e-38	100.0
WP_001009037.1\|2781133_2781538_+	transcriptional regulator	H6WRX4	Salmonella_phage	1.6e-71	99.3
WP_000917562.1\|2781936_2782095_+	hypothetical protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
WP_001539619.1\|2782116_2782467_+	hypothetical protein	S4TSN6	Salmonella_phage	1.1e-60	97.4
WP_000017125.1\|2782593_2785521_+	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	99.3
WP_077248255.1\|2785483_2786641_+	recombinase RecT	S4TTE8	Salmonella_phage	3.9e-216	99.5
WP_001237031.1\|2786683_2786923_+	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_001670787.1\|2786963_2787248_+	excisionase Xis	H6WRW8	Salmonella_phage	3.1e-42	86.2
WP_001007939.1\|2787225_2788455_-\|integrase	site-specific integrase	H6WRW7	Salmonella_phage	2.9e-233	94.4
WP_000589087.1\|2788952_2789432_-	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_000812017.1\|2789428_2790385_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_001168374.1\|2790384_2791035_-	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_000003307.1\|2791066_2791642_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_014344135.1\|2791638_2791803_-	rpoE leader peptide RseD	NA	NA	NA	NA
WP_000989177.1\|2792066_2793689_+	L-aspartate oxidase	NA	NA	NA	NA
WP_000083343.1\|2793673_2794411_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000219174.1\|2794541_2795876_+	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
WP_001526875.1\|2795893_2796793_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000188414.1\|2796895_2797483_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627811.1\|2797544_2797928_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
WP_000179978.1\|2798246_2798936_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
WP_000997368.1\|2799051_2800089_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
2807993:2808009	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2826899 : 2888234

Escherichia_phage(45.45%)

transposase,integrase,tRNA

attL 2842118:2842132|attR 2889823:2889837

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000469804.1\|2826899_2827667_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043266.1\|2827711_2828260_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000256453.1\|2828278_2828527_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460052.1\|2828840_2830202_-	signal recognition particle protein	NA	NA	NA	NA
WP_001537507.1\|2830367_2831159_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_127172650.1\|2831178_2832465_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001287923.1\|2832585_2833191_+	hypothetical protein	NA	NA	NA	NA
WP_001518875.1\|2833225_2833816_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059155.1\|2833938_2834817_+	NAD(+) kinase	NA	NA	NA	NA
WP_000880965.1\|2834902_2836564_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203445.1\|2836712_2837051_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001112990.1\|2837216_2837507_-	RnfH family protein	NA	NA	NA	NA
WP_000242603.1\|2837496_2837973_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_001518569.1\|2838121_2838604_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
WP_001237668.1\|2839217_2850692_+	biofilm-associated protein BapA	NA	NA	NA	NA
2842118:2842132	attL	NA	NA	NA	NA
WP_000533858.1\|2850756_2852166_+	TolC family outer membrane protein	NA	NA	NA	NA
WP_000196159.1\|2852162_2854343_+	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	1.3e-18	34.0
WP_010989057.1\|2854350_2855514_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_001542208.1\|2856114_2857179_+\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	1.6e-118	62.5
WP_001542209.1\|2857192_2857360_+	hypothetical protein	A0A1B5FPC6	Escherichia_phage	1.1e-07	61.9
WP_010989063.1\|2857406_2858000_+	hypothetical protein	NA	NA	NA	NA
WP_000248794.1\|2858389_2859583_+	hypothetical protein	NA	NA	NA	NA
WP_001161781.1\|2859917_2860745_-	hypothetical protein	NA	NA	NA	NA
WP_000701821.1\|2861195_2861411_+	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_001520307.1\|2861446_2863516_+	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	1.7e-73	35.1
WP_001520831.1\|2863936_2865220_+	AAA family ATPase	NA	NA	NA	NA
WP_010989064.1\|2865264_2866083_+	DUF4435 domain-containing protein	NA	NA	NA	NA
WP_010989065.1\|2866236_2866593_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000749979.1\|2866687_2866972_+	transcriptional regulator	A0A2I7S995	Vibrio_phage	5.4e-18	64.7
WP_000480483.1\|2867084_2867606_+	PTS sorbitol transporter subunit IIC	NA	NA	NA	NA
WP_000973738.1\|2867602_2867977_+	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA
WP_001098984.1\|2867973_2868954_+	PTS glucitol/sorbitol transporter subunit IIB	NA	NA	NA	NA
WP_001033832.1\|2868964_2869978_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_000889012.1\|2870272_2871475_+	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_000776032.1\|2871548_2872184_-	3-hexulose-6-phosphate synthase	NA	NA	NA	NA
WP_031603456.1\|2872207_2872771_-	6-phospho-3-hexuloisomerase	NA	NA	NA	NA
WP_000811366.1\|2872770_2873613_-	hypothetical protein	NA	NA	NA	NA
WP_000819716.1\|2873742_2875284_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_000021514.1\|2875506_2877186_+	SgrR family transcriptional regulator	NA	NA	NA	NA
WP_001067855.1\|2878236_2878941_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000027057.1\|2879525_2880386_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001387387.1\|2880535_2880937_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001067855.1\|2880983_2881688_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000480968.1\|2881748_2882585_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082319.1\|2882584_2883388_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_001043265.1\|2883448_2884264_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_000240536.1\|2884571_2885423_-	replication protein	NA	NA	NA	NA
WP_001067855.1\|2886178_2886883_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000935452.1\|2886929_2888234_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
2889823:2889837	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3362100 : 3403630

Cronobacter_phage(68.42%)

terminase,portal,capsid,head,integrase,tRNA,holin,tail

attL 3357437:3357452|attR 3400852:3400867

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3357437:3357452	attL	NA	NA	NA	NA
WP_001264394.1\|3362100_3363114_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.8e-109	59.5
WP_001144069.1\|3363341_3363557_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_000918865.1\|3363792_3365538_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.1e-72	38.4
WP_001519776.1\|3365687_3367535_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_000237776.1\|3367658_3368165_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_000340945.1\|3368488_3368791_-	hypothetical protein	NA	NA	NA	NA
WP_001680744.1\|3370159_3371860_-	hypothetical protein	F1BUJ7	Cronobacter_phage	9.9e-224	81.4
WP_000200789.1\|3371862_3372408_-	hypothetical protein	F1BUJ9	Cronobacter_phage	3.2e-59	72.0
WP_000267957.1\|3372379_3373105_-	hypothetical protein	F1BUK1	Cronobacter_phage	3.7e-63	53.5
WP_000861353.1\|3373094_3373649_-\|tail	tail fiber assembly protein	S4TUB9	Salmonella_phage	2.7e-90	89.0
WP_000084307.1\|3373661_3375896_-\|tail	tail protein	Q8HAB4	Salmonella_phage	7.2e-182	73.7
WP_001001828.1\|3375905_3376493_-	hypothetical protein	F1BUK5	Cronobacter_phage	3.8e-90	82.6
WP_000136921.1\|3376485_3377670_-	hypothetical protein	F1BUK6	Cronobacter_phage	6.7e-179	78.4
WP_001002797.1\|3377666_3377996_-	DUF2590 family protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
WP_000811094.1\|3377992_3379963_-\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	3.2e-274	70.8
WP_000411339.1\|3380150_3380408_-	hypothetical protein	A5X9I7	Aeromonas_virus	3.6e-21	63.4
WP_001670161.1\|3380394_3380583_-	hypothetical protein	F1BUL1	Cronobacter_phage	1.5e-21	77.4
WP_000376373.1\|3380554_3380887_-	hypothetical protein	F1BUL2	Cronobacter_phage	1.5e-35	70.9
WP_000175560.1\|3380886_3381228_-	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	2.2e-50	91.1
WP_001154425.1\|3381224_3381518_-\|holin	holin	C7BGD7	Burkholderia_phage	1.3e-14	46.2
WP_000166743.1\|3381527_3381983_-	DUF2597 family protein	F1BUL4	Cronobacter_phage	1.5e-57	72.2
WP_000220203.1\|3381979_3383107_-	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	1.9e-175	83.7
WP_000560080.1\|3383103_3383811_-	hypothetical protein	F1BUL6	Cronobacter_phage	1.3e-100	76.1
WP_000084218.1\|3383807_3384314_-\|tail	phage tail protein	F1BUL7	Cronobacter_phage	1.2e-63	69.1
WP_000447487.1\|3384310_3384799_-\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	2.3e-64	82.7
WP_001218537.1\|3384859_3385561_-\|terminase	terminase	F1BUM0	Cronobacter_phage	9.4e-88	66.8
WP_000550495.1\|3385564_3386587_-\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	3.9e-159	81.5
WP_000018800.1\|3386648_3387452_-\|capsid	phage capsid scaffolding protein	F1BUM4	Cronobacter_phage	2.0e-78	56.0
WP_001151939.1\|3387612_3389388_+	hypothetical protein	F1BUM5	Cronobacter_phage	9.8e-291	83.1
WP_000038213.1\|3389384_3390446_+\|portal	phage portal protein	F1BUM7	Cronobacter_phage	6.7e-162	76.8
WP_001552031.1\|3390442_3390766_+	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	8.0e-50	92.3
WP_000353141.1\|3390739_3390946_-	hypothetical protein	NA	NA	NA	NA
WP_000170874.1\|3391065_3393087_-	replication endonuclease	F1BUM9	Cronobacter_phage	7.9e-297	74.5
WP_000279404.1\|3393083_3393944_-	DNA adenine methylase	F1BUN1	Cronobacter_phage	1.1e-130	82.0
WP_000551169.1\|3393934_3394168_-	DUF2732 family protein	NA	NA	NA	NA
WP_000022786.1\|3394235_3394637_-	hypothetical protein	F1BUN2	Cronobacter_phage	1.4e-48	66.9
WP_000996837.1\|3394636_3395062_-	hypothetical protein	F1BUN5	Cronobacter_phage	2.2e-23	49.6
WP_000643375.1\|3395051_3395279_-	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_000460878.1\|3395288_3395792_-	hypothetical protein	F1BUN6	Cronobacter_phage	3.5e-60	72.5
WP_001247711.1\|3395822_3396044_-	hypothetical protein	NA	NA	NA	NA
WP_000514631.1\|3396187_3396769_+	phage repressor protein	A0A218M4J1	Erwinia_phage	1.2e-27	37.2
WP_000568372.1\|3396785_3397352_+	hypothetical protein	Q4ZA70	Staphylococcus_virus	1.3e-18	32.8
WP_001145219.1\|3397355_3398393_+\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	1.5e-121	63.9
WP_000627044.1\|3398382_3400164_+	ATP-binding protein	X2KLG0	Campylobacter_phage	6.4e-08	23.2
WP_000213760.1\|3400421_3401189_-	siderophore-interacting protein	NA	NA	NA	NA
3400852:3400867	attR	NA	NA	NA	NA
WP_000983441.1\|3401420_3402068_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_000478472.1\|3402064_3403630_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-12	33.9

DBSCAN-SWA_12

4438960 : 4459380

Burkholderia_phage(45.0%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000587738.1\|4438960_4439689_-	hypothetical protein	A0A077SLK3	Escherichia_phage	5.6e-35	37.3
WP_010989092.1\|4439885_4440176_-	membrane protein	NA	NA	NA	NA
WP_000084331.1\|4440424_4440880_-	hypothetical protein	NA	NA	NA	NA
WP_001526208.1\|4440876_4441482_-	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_000368196.1\|4441486_4443232_-\|tail	tail protein	A0A0M3ULF6	Salmonella_phage	3.2e-52	52.2
WP_000359500.1\|4443234_4443867_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
WP_000951736.1\|4443859_4444975_-\|plate	baseplate protein	Q6QI99	Burkholderia_phage	1.8e-101	52.2
WP_001093501.1\|4444965_4445325_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_001095011.1\|4445488_4447036_-	membrane protein	B9UDL6	Salmonella_phage	1.9e-48	29.9
WP_000703632.1\|4447035_4447965_-	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	8.8e-150	83.8
WP_000593182.1\|4447961_4448324_-	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
WP_000679398.1\|4448651_4449374_-\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.3e-11	41.0
WP_000818154.1\|4449383_4450427_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	2.5e-76	45.1
WP_001269716.1\|4450414_4450624_-	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_000271423.1\|4450623_4451577_-	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_001262499.1\|4451576_4453931_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	9.0e-66	30.6
WP_001185654.1\|4454027_4454156_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001003642.1\|4454115_4454433_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000907494.1\|4454484_4455009_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_000729852.1\|4455008_4456436_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
WP_000875314.1\|4456425_4456623_-	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
WP_000449433.1\|4456619_4457075_-	hypothetical protein	NA	NA	NA	NA
WP_000777266.1\|4457234_4457549_-	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_001270441.1\|4457561_4458167_-	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-60	59.9
WP_001226442.1\|4458169_4458457_-	membrane protein	Q6QIC8	Burkholderia_phage	2.3e-16	49.1
WP_000615248.1\|4459032_4459380_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5

DBSCAN-SWA_13

4485829 : 4529693

Shigella_phage(44.07%)

terminase,portal,plate,capsid,head,protease,integrase,tRNA,holin,tail

attL 4476401:4476416|attR 4537526:4537541

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4476401:4476416	attL	NA	NA	NA	NA
WP_000549966.1\|4485829_4486264_+	hypothetical protein	A0A0S2SYH1	Pseudomonas_phage	5.2e-36	51.0
WP_001093909.1\|4486290_4486563_-	hypothetical protein	S5MQM5	Escherichia_phage	5.9e-38	86.7
WP_001061343.1\|4486599_4487172_-	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	3.7e-106	96.8
WP_000206745.1\|4487171_4487981_-	hypothetical protein	Q8HAA7	Salmonella_phage	3.3e-76	61.8
WP_001565177.1\|4487980_4488343_-	phage protein	U5P092	Shigella_phage	1.5e-65	97.5
WP_000008210.1\|4488333_4488870_-	5'-deoxynucleotidase	U5P0T3	Shigella_phage	9.7e-101	99.4
WP_033567165.1\|4488997_4489822_-	DUF2303 family protein	U5P439	Shigella_phage	1.1e-148	98.9
WP_001323604.1\|4489887_4490268_-	hypothetical protein	U5P4J6	Shigella_phage	1.3e-62	100.0
WP_001514782.1\|4490850_4491126_-	hypothetical protein	Q8SBF7	Shigella_phage	7.0e-47	97.8
WP_001369946.1\|4491134_4491338_-	ClpX C4-type zinc finger	A0A1C9IHZ4	Salmonella_phage	8.9e-15	68.3
WP_000848748.1\|4491509_4492184_-	LexA family transcriptional repressor	U5P0T5	Shigella_phage	1.2e-132	100.0
WP_000649477.1\|4492274_4492475_+	transcriptional regulator	U5P445	Shigella_phage	7.9e-32	100.0
WP_000515829.1\|4492518_4493076_+	protein YmfL	S5FXP0	Shigella_phage	1.1e-96	96.2
WP_001250269.1\|4493251_4493431_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_000104942.1\|4493420_4494362_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.7e-140	93.3
WP_086936917.1\|4494358_4494853_+	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	4.7e-86	97.5
WP_001433188.1\|4494852_4495506_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	5.6e-127	99.1
WP_000210170.1\|4495502_4495829_+	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
WP_001398927.1\|4495825_4496215_+	RusA family crossover junction endodeoxyribonuclease	A0A291AX14	Escherichia_phage	5.4e-69	100.0
WP_001061444.1\|4496234_4497044_+	KilA-N domain-containing protein	A0A291AWU7	Escherichia_phage	1.8e-151	100.0
WP_033567167.1\|4497051_4498041_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.1e-194	99.4
WP_048306282.1\|4498054_4498807_+	antitermination protein	A0A192Y5X6	Salmonella_phage	9.0e-145	99.6
WP_001624505.1\|4498957_4499215_+	hypothetical protein	A0A1C9IHX4	Salmonella_phage	3.1e-41	100.0
WP_001283169.1\|4499360_4499747_+	membrane protein	A0A192Y8P2	Salmonella_phage	7.0e-61	100.0
WP_000422366.1\|4499733_4500015_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	9.7e-20	45.2
WP_001624504.1\|4500014_4500629_+	glycoside hydrolase family 19 protein	A0A192Y6G4	Salmonella_phage	5.7e-113	100.0
WP_001530346.1\|4500625_4501018_+	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	2.8e-65	100.0
WP_001379492.1\|4501480_4501813_+	hypothetical protein	A0A192Y5Y1	Salmonella_phage	2.8e-58	100.0
WP_001135098.1\|4501863_4502214_+	HNH endonuclease	M1FQV2	Enterobacteria_phage	9.8e-62	94.8
WP_048306293.1\|4502339_4502825_+\|terminase	phage terminase small subunit P27 family	Q8SBI1	Shigella_phage	6.1e-86	98.8
WP_000088161.1\|4502838_4504572_+\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	0.0e+00	100.0
WP_000605606.1\|4504583_4504766_+	hypothetical protein	S5FXQ9	Shigella_phage	1.7e-25	100.0
WP_001514795.1\|4504765_4506007_+\|portal	phage portal protein	U5P411	Shigella_phage	5.0e-241	99.5
WP_021578635.1\|4505984_4506635_+\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	3.6e-118	99.1
WP_021567480.1\|4506649_4507855_+\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	3.5e-223	99.5
WP_021577001.1\|4507904_4508132_+	hypothetical protein	S5FNU1	Shigella_phage	2.2e-22	94.9
WP_000927719.1\|4508106_4508430_+\|head,tail	phage gp6-like head-tail connector protein	U5P072	Shigella_phage	1.1e-56	99.1
WP_000702388.1\|4508426_4508837_+\|head	phage head closure protein	M1FJ87	Enterobacteria_phage	5.9e-74	97.8
WP_022630978.1\|4508811_4509318_+	hypothetical protein	M1FPE2	Enterobacteria_phage	5.0e-91	99.4
WP_000779279.1\|4509314_4509875_+	hypothetical protein	M1FQV7	Enterobacteria_phage	2.3e-105	99.5
WP_000497751.1\|4509883_4510054_+	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	9.3e-26	100.0
WP_022630977.1\|4510037_4511534_+\|tail	tail sheath protein	M1FN90	Enterobacteria_phage	7.7e-273	99.0
WP_000090998.1\|4511533_4511890_+	hypothetical protein	U5P076	Shigella_phage	5.3e-63	100.0
WP_000661047.1\|4511889_4512159_+\|tail	phage tail assembly protein	S5FNR3	Shigella_phage	3.5e-43	100.0
WP_023200330.1\|4512300_4514133_+\|tail	phage tail tape measure protein	S5FM63	Shigella_phage	4.7e-304	99.2
WP_001439754.1\|4514214_4514727_+	hypothetical protein	NA	NA	NA	NA
WP_000219913.1\|4514817_4516146_+	DNA circularization protein	Q8SBG8	Shigella_phage	8.4e-247	99.3
WP_000999499.1\|4516142_4517222_+\|plate	baseplate protein	Q8SBG7	Shigella_phage	5.3e-207	99.7
WP_022630975.1\|4517221_4517770_+\|plate	phage baseplate assembly protein	U5P081	Shigella_phage	1.9e-96	97.8
WP_000424732.1\|4517769_4518195_+	hypothetical protein	U5P0R9	Shigella_phage	2.3e-81	100.0
WP_022630974.1\|4518181_4519240_+\|plate	baseplate J/gp47 family protein	Q8SBG4	Shigella_phage	5.2e-199	98.6
WP_000383548.1\|4519230_4519815_+	YmfQ family protein	O22003	Shigella_phage	1.1e-113	100.0
WP_023200332.1\|4519818_4521351_+	hypothetical protein	A0A1B0VFW4	Salmonella_phage	1.6e-241	97.9
WP_006678265.1\|4521320_4521938_+\|tail	tail fiber assembly protein	A0A1B0VCD0	Salmonella_phage	5.7e-113	100.0
WP_001747940.1\|4521941_4522349_-\|tail	tail assembly chaperone	A0A1B0V844	Salmonella_phage	4.9e-73	100.0
WP_006678262.1\|4522350_4523079_-	hypothetical protein	A0A1B0V7G4	Salmonella_phage	2.8e-143	100.0
WP_000639149.1\|4523404_4523968_+	recombinase family protein	K7PJT4	Enterobacteria_phage	3.4e-80	79.1
WP_033567204.1\|4524111_4524360_-	DinI-like family protein	K7PLW4	Enterobacteria_phage	2.0e-37	98.8
WP_000332264.1\|4524421_4525519_-\|integrase	site-specific integrase	S5MDN5	Escherichia_phage	4.3e-212	100.0
WP_022630972.1\|4525607_4526645_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_000891414.1\|4526812_4527055_+	envelope stress response protein PspG	NA	NA	NA	NA
WP_000235551.1\|4527229_4528213_-	quinone oxidoreductase	NA	NA	NA	NA
WP_000918353.1\|4528277_4529693_+	replicative DNA helicase	A0A1B0VG30	Salmonella_phage	7.0e-199	78.4
4537526:4537541	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019647

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP019649

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection