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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP022155 Escherichia coli strain ABWA45 plasmid pABWA45_1, complete sequence 0 crisprs RT,csa3 0 0 1 0
NZ_CP022159 Escherichia coli strain ABWA45 plasmid pABWA45_5 sequence 0 crisprs NA 0 0 0 0
NZ_CP022154 Escherichia coli strain ABWA45 chromosome, complete genome 6 crisprs RT,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas1,cas2,DinG,c2c9_V-U4,DEDDh,WYL,TnsE_C 0 18 18 0
NZ_CP022156 Escherichia coli strain ABWA45 plasmid pABWA45_2, complete sequence 0 crisprs csa3 0 0 1 0
NZ_CP022157 Escherichia coli strain ABWA45 plasmid pABWA45_3, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP022158 Escherichia coli strain ABWA45 plasmid pABWA45_4, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP022155
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1795 : 118134 119 Escherichia_phage(29.09%) transposase,protease,integrase,tail,lysis attL 53266:53280|attR 114003:114017

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP022154
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022154_1 1114495-1115133 Orphan I-E
10 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022154_2 1143382-1144692 TypeI-E I-E
21 spacers
cas2,cas1,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022154_3 1801204-1801351 Orphan I-F
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022154_4 3214784-3214924 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022154_5 3723318-3723414 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022154_6 3948860-3948989 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP022154_2 2.21|1144632|32|NZ_CP022154|CRT 1144632-1144663 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246937-246968 3 0.906
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_AP019198 Aeromonas caviae strain GSH8M-1 plasmid pGSH8M-1-3, complete sequence 2591-2622 6 0.812
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 564963-564994 6 0.812
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 553238-553269 6 0.812
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 513523-513554 6 0.812
NZ_CP022154_1 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114646-1114677 32 NZ_CP032340 Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence 723718-723749 7 0.781
NZ_CP022154_1 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114646-1114677 32 NZ_CP054617 Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence 87770-87801 7 0.781
NZ_CP022154_1 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114646-1114677 32 NZ_CP012915 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence 1408666-1408697 7 0.781
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_CP020471 Rhodobacter blasticus strain 28/5 plasmid pRsa, complete sequence 155620-155651 7 0.781
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_LN907829 Erwinia gerundensis isolate E_g_EM595 plasmid pEM02, complete sequence 28526-28557 7 0.781
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 KU708004 Pseudomonas phage phiAH14a, complete genome 25584-25615 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_MG299151 Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence 51276-51307 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_KY471628 Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence 45716-45747 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_MG299131 Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence 51276-51307 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_KY471629 Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence 45716-45747 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_MG299133 Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence 51276-51307 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_MG299128 Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence 51276-51307 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_MG299147 Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence 51276-51307 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NC_018995 Escherichia coli plasmid pHUSEC41-1, complete sequence 29015-29046 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_CP053235 Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence 78292-78323 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_CP005999 Escherichia coli B7A plasmid pEB1, complete sequence 39563-39594 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 KU932021 Escherichia coli plasmid pEC3I, complete sequence 51902-51933 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_CP024154 Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence 18560-18591 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NC_011754 Escherichia coli ED1a plasmid pECOED, complete sequence 49240-49271 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_CP015141 Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence 81434-81465 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_LR213460 Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3 28916-28947 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_MH287044 Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence 36182-36213 7 0.781
NZ_CP022154_1 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1115012-1115043 32 NZ_MH618673 Escherichia coli strain 838B plasmid p838B-R, complete sequence 32230-32261 7 0.781
NZ_CP022154_2 2.3|1143533|33|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143533-1143565 33 NC_016592 Burkholderia sp. YI23 plasmid byi_3p, complete sequence 54505-54537 7 0.788
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_AP022602 Mycobacterium gallinarum strain JCM 6399 plasmid pJCM6399 61998-62029 7 0.781
NZ_CP022154_2 2.13|1144144|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144144-1144175 32 NC_020846 Vibrio phage pYD21-A genomic sequence 43129-43160 7 0.781
NZ_CP022154_2 2.21|1144632|32|NZ_CP022154|CRT 1144632-1144663 32 NZ_CP015038 Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence 112768-112799 7 0.781
NZ_CP022154_1 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114646-1114677 32 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 1666660-1666691 8 0.75
NZ_CP022154_1 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114646-1114677 32 NZ_CP007130 Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence 881877-881908 8 0.75
NZ_CP022154_1 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114646-1114677 32 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 1380729-1380760 8 0.75
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_CP017750 Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence 63953-63984 8 0.75
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_CP046332 Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2 75510-75541 8 0.75
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_CP026545 Cupriavidus metallidurans strain Ni-2 plasmid unnamed1 22157-22188 8 0.75
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NC_020548 Azoarcus sp. KH32C plasmid pAZKH, complete sequence 612307-612338 8 0.75
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NC_006466 Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence 113480-113511 8 0.75
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NC_022001 Streptomyces collinus Tu 365 plasmid pSCO1, complete sequence 36018-36049 8 0.75
NZ_CP022154_1 1.8|1114951|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114951-1114982 32 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1417960-1417991 8 0.75
NZ_CP022154_2 2.2|1143472|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143472-1143503 32 NZ_CP054621 Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence 282558-282589 8 0.75
NZ_CP022154_2 2.16|1144327|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144327-1144358 32 NZ_CP017750 Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence 148991-149022 8 0.75
NZ_CP022154_2 2.16|1144327|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144327-1144358 32 NC_007336 Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence 530640-530671 8 0.75
NZ_CP022154_2 2.17|1144388|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144388-1144419 32 NZ_CP006991 Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence 532343-532374 8 0.75
NZ_CP022154_2 2.19|1144510|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144510-1144541 32 MK448454 Streptococcus satellite phage Javan361, complete genome 9192-9223 8 0.75
NZ_CP022154_2 2.21|1144632|32|NZ_CP022154|CRT 1144632-1144663 32 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 1428097-1428128 8 0.75
NZ_CP022154_3 3.1|1801232|32|NZ_CP022154|CRISPRCasFinder 1801232-1801263 32 MN657149 Chryseobacterium sp. strain ANT_H2B plasmid pA2BH1, complete sequence 30703-30734 8 0.75
NZ_CP022154_1 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114646-1114677 32 NZ_CP013369 Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence 124397-124428 9 0.719
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 CP009871 Pantoea sp. PSNIH2 plasmid pPSP-cd6, complete sequence 57198-57229 9 0.719
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_HG938356 Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence 525527-525558 9 0.719
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_CP032704 Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence 75841-75872 9 0.719
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NC_016586 Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence 289058-289089 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP026242 Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence 168728-168759 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP009883 Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence 5480-5511 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP010380 Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence 100871-100902 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP026171 Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence 69667-69698 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP026196 Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence 140212-140243 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_AP021845 Azospira sp. I09 plasmid pAZI09, complete sequence 335649-335680 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 CP009869 Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence 51816-51847 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP042479 Citrobacter freundii strain C50 plasmid pC50_001, complete sequence 136819-136850 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP026208 Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence 50052-50083 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP032179 Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence 65506-65537 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP026391 Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence 6461-6492 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP029142 Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence 256679-256710 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP031135 Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence 47914-47945 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP011635 Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence 9471-9502 9 0.719
NZ_CP022154_2 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143595-1143626 32 NZ_CP044111 Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2 384417-384448 9 0.719
NZ_CP022154_2 2.9|1143900|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143900-1143931 32 NZ_CP031069 Bacillus sp. JAS24-2 plasmid pl626, complete sequence 223294-223325 9 0.719
NZ_CP022154_2 2.13|1144144|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144144-1144175 32 NZ_AP018284 Chondrocystis sp. NIES-4102 plasmid plasmid3 DNA, complete genome 48656-48687 9 0.719
NZ_CP022154_2 2.16|1144327|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144327-1144358 32 NZ_CP036297 Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence 14953-14984 9 0.719
NZ_CP022154_2 2.16|1144327|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144327-1144358 32 NZ_CP036288 Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence 14983-15014 9 0.719
NZ_CP022154_2 2.16|1144327|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144327-1144358 32 NZ_CP015882 Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence 3454-3485 9 0.719
NZ_CP022154_2 2.17|1144388|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144388-1144419 32 NZ_CP040723 Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence 35740-35771 9 0.719
NZ_CP022154_2 2.21|1144632|32|NZ_CP022154|CRT 1144632-1144663 32 NZ_CP017563 Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence 141278-141309 9 0.719
NZ_CP022154_1 1.1|1114524|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114524-1114555 32 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 369874-369905 10 0.688
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_HG938354 Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence 485869-485900 10 0.688
NZ_CP022154_1 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1114707-1114738 32 NZ_CP031159 Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence 103512-103543 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NC_019848 Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence 980243-980274 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NC_003037 Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence 486975-487006 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP019585 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence 608923-608954 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NC_017327 Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence 985577-985608 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP021798 Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence 230272-230303 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NC_017324 Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence 980505-980536 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP009145 Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence 1027823-1027854 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP021801 Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence 934123-934154 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP021830 Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence 431603-431634 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP021824 Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence 911568-911599 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP021813 Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence 897766-897797 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NC_018683 Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence 767780-767811 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP021794 Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence 70533-70564 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP021809 Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence 1407227-1407258 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP021805 Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence 840252-840283 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP021217 Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence 571974-572005 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP026526 Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence 829990-830021 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP019483 Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence 451104-451135 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NC_009621 Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence 1101693-1101724 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NZ_CP019486 Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence 426921-426952 10 0.688
NZ_CP022154_2 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143717-1143748 32 NC_020527 Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence 486635-486666 10 0.688
NZ_CP022154_2 2.10|1143961|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143961-1143992 32 JQ182733 Enterobacterial phage mEp213, complete genome 1-24 10 0.688
NZ_CP022154_2 2.10|1143961|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1143961-1143992 32 NC_019706 Enterobacteria phage mEp043 c-1, complete genome 1-24 10 0.688
NZ_CP022154_2 2.15|1144266|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144266-1144297 32 NC_007766 Rhizobium etli CFN 42 plasmid p42f, complete sequence 190028-190059 10 0.688
NZ_CP022154_2 2.15|1144266|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144266-1144297 32 NZ_CP006990 Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence 191384-191415 10 0.688
NZ_CP022154_2 2.15|1144266|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144266-1144297 32 NZ_CP020911 Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence 329763-329794 10 0.688
NZ_CP022154_2 2.15|1144266|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144266-1144297 32 NC_021911 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence 796218-796249 10 0.688
NZ_CP022154_2 2.15|1144266|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144266-1144297 32 NZ_CP021127 Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence 177984-178015 10 0.688
NZ_CP022154_2 2.15|1144266|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT 1144266-1144297 32 CP007644 Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence 190516-190547 10 0.688

1. spacer 2.21|1144632|32|NZ_CP022154|CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 3, identity: 0.906 

ggcgcactggatgcgatgatggatatcactta	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
*.*********************.*******.

2. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019198 (Aeromonas caviae strain GSH8M-1 plasmid pGSH8M-1-3, complete sequence) position: , mismatch: 6, identity: 0.812 

tgggtcatgccggtgatcgcctgcccgtcgtg	CRISPR spacer
agcttccggccggtgagcgcctgcccgtcgtg	Protospacer
 *  **  ******** ***************

3. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.812 

tgggtcat-gccggtgatcgcctgcccgtcgtg	CRISPR spacer
-aagtcgtcgcaggtgaccgcctgcccgtcgtg	Protospacer
 ..***.* ** *****.***************

4. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 6, identity: 0.812 

tgggtcat-gccggtgatcgcctgcccgtcgtg	CRISPR spacer
-aagtcgtcgcaggtgaccgcctgcccgtcgtg	Protospacer
 ..***.* ** *****.***************

5. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.812 

tgggtcat-gccggtgatcgcctgcccgtcgtg	CRISPR spacer
-aagtcgtcgcaggtgaccgcctgcccgtcgtg	Protospacer
 ..***.* ** *****.***************

6. spacer 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781 

cgaccgcgtgggcgtctacgtgggggattaga	CRISPR spacer
cgaccgcgtgggcgtccatgtgggccgccaga	Protospacer
****************.*.*****  ...***

7. spacer 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.781 

cgaccgcgtgggcgtctacgtgg---gggattaga	CRISPR spacer
agaccgcgtcggcgtcgacgtggggcgggatc---	Protospacer
 ******** ****** ******   *****.

8. spacer 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 7, identity: 0.781 

cgaccgcgtgggcgtctacgtgggggattaga	CRISPR spacer
cgaccgcgtgggcgtccatgtgggccgccaga	Protospacer
****************.*.*****  ...***

9. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020471 (Rhodobacter blasticus strain 28/5 plasmid pRsa, complete sequence) position: , mismatch: 7, identity: 0.781 

tgggtcatgccggtgatcgcctgcccgtcgtg	CRISPR spacer
ggcttcatgccggtgatgtcctgcccgtcgaa	Protospacer
 *  *************  *********** .

10. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN907829 (Erwinia gerundensis isolate E_g_EM595 plasmid pEM02, complete sequence) position: , mismatch: 7, identity: 0.781 

tgggtcatgccggtgatcgcctgcccgtcgtg-	CRISPR spacer
ctcgtcatgctggtgatcgcctgccc-ctgtgc	Protospacer
.  *******.*************** ..***

11. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to KU708004 (Pseudomonas phage phiAH14a, complete genome) position: , mismatch: 7, identity: 0.781 

tgggtcatgccggtgatcgcctgc--ccgtcgtg	CRISPR spacer
gggatgatgccggtgatcgcctgcaaccgcct--	Protospacer
 **.* ******************  ***.*

12. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299151 (Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

13. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY471628 (Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

14. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299131 (Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

15. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY471629 (Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

16. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299133 (Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

17. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299128 (Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

18. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299147 (Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

19. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_018995 (Escherichia coli plasmid pHUSEC41-1, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

20. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053235 (Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

21. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP005999 (Escherichia coli B7A plasmid pEB1, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

22. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to KU932021 (Escherichia coli plasmid pEC3I, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

23. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024154 (Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

24. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_011754 (Escherichia coli ED1a plasmid pECOED, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

25. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015141 (Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

26. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR213460 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

27. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH287044 (Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

28. spacer 1.9|1115012|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH618673 (Escherichia coli strain 838B plasmid p838B-R, complete sequence) position: , mismatch: 7, identity: 0.781 

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***

29. spacer 2.3|1143533|33|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_016592 (Burkholderia sp. YI23 plasmid byi_3p, complete sequence) position: , mismatch: 7, identity: 0.788 

-tggattaatccgcggctggcgatatctcgcagc	CRISPR spacer
ctaggtcag-ccgcagccggcgatatctcgcagc	Protospacer
 *.*.*.*. ****.**.****************

30. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022602 (Mycobacterium gallinarum strain JCM 6399 plasmid pJCM6399) position: , mismatch: 7, identity: 0.781 

cccctgtcgccgttggcggattct---ttcctgta	CRISPR spacer
ccccggtcgccggtggcggattctgggtgcat---	Protospacer
**** ******* ***********   * * *

31. spacer 2.13|1144144|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_020846 (Vibrio phage pYD21-A genomic sequence) position: , mismatch: 7, identity: 0.781 

aattaaa--tgattttgatgcgcgccgacttgaa	CRISPR spacer
--ttgaacgtgataatgatgcgcgccgacttggt	Protospacer
  **.**  ****  *****************.

32. spacer 2.21|1144632|32|NZ_CP022154|CRT matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 7, identity: 0.781 

ggcgcactggatgcgatgatggat-atcactta	CRISPR spacer
ggcgcactggctgcgatgaaggacgatcaacc-	Protospacer
********** ******** ***. **** ..

33. spacer 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75 

cgaccgcgtgggcgtctacgtgggggattaga	CRISPR spacer
cgaccgcgtgggcgtccatgtgggccgccagc	Protospacer
****************.*.*****  ...**

34. spacer 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75 

cgaccgcgtgggcgtctacgtgggggattaga	CRISPR spacer
ggagcgcgtgggcgtctacatggggatcttca	Protospacer
 ** ***************.*****. .*  *

35. spacer 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.75 

cgaccgcgtgggcgtctacgtgggggattaga	CRISPR spacer
cgaccgcgtgggcgtccatgtgggccgccagc	Protospacer
****************.*.*****  ...**

36. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

tgggtcatgccggtgatcgcctgcccgtcgtg-	CRISPR spacer
ctggtcctgctggtgatcgcctgccc-ctgcgc	Protospacer
. **** ***.*************** ..*.*

37. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046332 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2) position: , mismatch: 8, identity: 0.75 

tgggtcatgccggtgatcgcctgcccgtcgtg-	CRISPR spacer
ctggtcctgctggtgatcgcctgccc-ctgcgc	Protospacer
. **** ***.*************** ..*.*

38. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026545 (Cupriavidus metallidurans strain Ni-2 plasmid unnamed1) position: , mismatch: 8, identity: 0.75 

tgggtcatgccggtgatcgcctgcccgtcgtg-	CRISPR spacer
ctggtcctgctggtgatcgcctgccc-ctgcgc	Protospacer
. **** ***.*************** ..*.*

39. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 8, identity: 0.75 

tgggtcatgccggtgatcgcctgcccgtcgtg	CRISPR spacer
tcggtgatgccggtgatcgcctacctgaccga	Protospacer
* *** ****************.**.* *  .

40. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_006466 (Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence) position: , mismatch: 8, identity: 0.75 

tgggtcatgccggtgatcgcctgcccgtcgtg-	CRISPR spacer
ctggtcctgctggtgatcgcctgccc-ctgcgc	Protospacer
. **** ***.*************** ..*.*

41. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_022001 (Streptomyces collinus Tu 365 plasmid pSCO1, complete sequence) position: , mismatch: 8, identity: 0.75 

tgggtcatgccggtgatcgcctg--cccgtcgtg	CRISPR spacer
tgggccatgtcggtgatcgcctggagctgcct--	Protospacer
****.****.*************   *.*.*

42. spacer 1.8|1114951|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75 

tcaacgcgctcagacgttgcgtgagtgaacca	CRISPR spacer
acaacgcggtcggacgttgcgtgattaccccg	Protospacer
 ******* **.************ *.  **.

43. spacer 2.2|1143472|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75 

cgctggtggcggaaaacagccaaaataacgca--	CRISPR spacer
cgctggtggcggaaatcagc--gaatgatggctg	Protospacer
*************** ****  .***.*.*

44. spacer 2.16|1144327|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
gggtacggctggcgaaggaggcggctgcggaa	Protospacer
  * ************* ***.*****  * *

45. spacer 2.16|1144327|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75 

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
ccgaacaggtggcgaagcaggtgatgggccag	Protospacer
******.* **************.. ***  .

46. spacer 2.17|1144388|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 8, identity: 0.75 

gtttaccgccccgcagaggcgctggcagatcc	CRISPR spacer
catcatcctcccgcagatgcgctggccgatcc	Protospacer
  *.*.* .******** ******** *****

47. spacer 2.19|1144510|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to MK448454 (Streptococcus satellite phage Javan361, complete genome) position: , mismatch: 8, identity: 0.75 

tccgtttggtccaccaaatgtttgatgcttca	CRISPR spacer
tcttatcaatccaccaaatttttgattcttca	Protospacer
**.  *...********** ****** *****

48. spacer 2.21|1144632|32|NZ_CP022154|CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75 

ggcgcactggatgcgatgatggata---tcactta	CRISPR spacer
ggcgcactggaagcggtgatggaggggcgcac---	Protospacer
*********** ***.******* .    ***

49. spacer 3.1|1801232|32|NZ_CP022154|CRISPRCasFinder matches to MN657149 (Chryseobacterium sp. strain ANT_H2B plasmid pA2BH1, complete sequence) position: , mismatch: 8, identity: 0.75 

gctgtattcggcaaatgaagtggatgttgatg	CRISPR spacer
aatttattcggaaaatgaagtggatcttactc	Protospacer
. * ******* ************* **. *

50. spacer 1.3|1114646|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013369 (Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence) position: , mismatch: 9, identity: 0.719 

cgaccgcgtgggcgtctacgtgggggattaga	CRISPR spacer
gtatcgcgtggacgtctacgtggcggatcgct	Protospacer
  *.*******.*********** ****..

51. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to CP009871 (Pantoea sp. PSNIH2 plasmid pPSP-cd6, complete sequence) position: , mismatch: 9, identity: 0.719 

tgggtcatgccggtgatcgcctgcccgtcgtg-	CRISPR spacer
cttgtcatgctggttatcgcctgccc-ctgcgc	Protospacer
.  *******.*** *********** ..*.*

52. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 9, identity: 0.719 

tgggtcatgccggtgatcgcctgcccgtcgtg	CRISPR spacer
aaactcatgccggcgatcgccagcccggagag	Protospacer
 .. *********.******* *****  * *

53. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032704 (Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719 

tgggtcatgccggtgatcgcctgcccgtcgtg-	CRISPR spacer
cttgtcatgctggttatcgcctgccc-ctgcgc	Protospacer
.  *******.*** *********** ..*.*

54. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 9, identity: 0.719 

tgggtcatgccggtgatcgcctgcccgtcgtg	CRISPR spacer
gtgcccaagccggtgatctcctgcccgttgaa	Protospacer
  * .** ********** *********.* .

55. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026242 (Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

56. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009883 (Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

57. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010380 (Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

58. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026171 (Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

59. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026196 (Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

60. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP021845 (Azospira sp. I09 plasmid pAZI09, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

61. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to CP009869 (Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

62. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042479 (Citrobacter freundii strain C50 plasmid pC50_001, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

63. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026208 (Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

64. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032179 (Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

65. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026391 (Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

66. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029142 (Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

67. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031135 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

68. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011635 (Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

69. spacer 2.4|1143595|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044111 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2) position: , mismatch: 9, identity: 0.719 

cccctgtcgccgttggcggattctttcctgta	CRISPR spacer
ccgtcctcgccgtcggcggcttctttcctcgc	Protospacer
** .. *******.***** *********

70. spacer 2.9|1143900|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031069 (Bacillus sp. JAS24-2 plasmid pl626, complete sequence) position: , mismatch: 9, identity: 0.719 

tttagctaatattgggcggctaacgtcatcaa	CRISPR spacer
tcaattgcatattgggcagctaaagtcatcag	Protospacer
*. * .  *********.***** *******.

71. spacer 2.13|1144144|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018284 (Chondrocystis sp. NIES-4102 plasmid plasmid3 DNA, complete genome) position: , mismatch: 9, identity: 0.719 

aattaaatgattttgatgcgcgccgacttgaa	CRISPR spacer
gggtaaatgattttgatgcgctctgagtcgct	Protospacer
.. ****************** *.** *.*

72. spacer 2.16|1144327|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036297 (Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence) position: , mismatch: 9, identity: 0.719 

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
agcggcagctggcgatgcaggtggcttgcgtg	Protospacer
   ..*.******** ********** ****.

73. spacer 2.16|1144327|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036288 (Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence) position: , mismatch: 9, identity: 0.719 

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
agcggcagctggcgatgcaggtggcttgcgtg	Protospacer
   ..*.******** ********** ****.

74. spacer 2.16|1144327|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 9, identity: 0.719 

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
ttgcgcagctggcgcagcaggtggctgccgag	Protospacer
..* .*.******* ************ ** .

75. spacer 2.17|1144388|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719 

gtttaccgccccgcagaggcgctggcagatcc	CRISPR spacer
cgagaccgcctcgccgaggcgctggcagcgac	Protospacer
    ******.*** *************   *

76. spacer 2.21|1144632|32|NZ_CP022154|CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 9, identity: 0.719 

ggcgcactggatgcgatgatggatatcactta	CRISPR spacer
ggcgcactggaaccgatgatggatgcgatgag	Protospacer
***********  ***********.. *.  .

77. spacer 1.1|1114524|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 10, identity: 0.688 

atacgccccaaccagaaataaatttaggggat	CRISPR spacer
ggtctaatgaaccaggaatagatttaggggat	Protospacer
.  *   . ******.****.***********

78. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 10, identity: 0.688 

tgggtcatgccggtgatcgcctgcccgtcgtg	CRISPR spacer
aaactcatgccggcgatcgccagcccggaaag	Protospacer
 .. *********.******* *****  . *

79. spacer 1.4|1114707|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031159 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence) position: , mismatch: 10, identity: 0.688 

tgggtcatgccggtgatcgcctgcccgtcgtg	CRISPR spacer
gtactcaggccggtgatcgcgtgcccgctggt	Protospacer
  . *** ************ ******..*

80. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

81. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

82. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

83. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

84. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

85. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

86. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

87. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

88. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

89. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

90. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

91. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

92. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

93. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

94. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

95. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

96. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

97. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

98. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

99. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

100. spacer 2.6|1143717|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggaatctgctgcgcacaagttacacggcgc	CRISPR spacer
cctttgactgctgtgcacaagttgcacggcca	Protospacer
 *   . ******.*********.******

101. spacer 2.10|1143961|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to JQ182733 (Enterobacterial phage mEp213, complete genome) position: , mismatch: 10, identity: 0.688 

gttaaatattgttcaccatcatggatcaggaa	CRISPR spacer
--------gtgttcaccatcatggaccaggaa	Protospacer
         ****************.******

102. spacer 2.10|1143961|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_019706 (Enterobacteria phage mEp043 c-1, complete genome) position: , mismatch: 10, identity: 0.688 

gttaaatattgttcaccatcatggatcaggaa	CRISPR spacer
--------gtgttcaccatcatggaccaggaa	Protospacer
         ****************.******

103. spacer 2.15|1144266|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_007766 (Rhizobium etli CFN 42 plasmid p42f, complete sequence) position: , mismatch: 10, identity: 0.688 

catctatttatctcgccgcgattggcgataac	CRISPR spacer
agcacgtttatcacgccgcgtttggcgatcgc	Protospacer
 .. ..****** ******* ******** .*

104. spacer 2.15|1144266|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 10, identity: 0.688 

catctatttatctcgccgcgattggcgataac	CRISPR spacer
agcacgtttatcacgccgcgtttggcgatcgc	Protospacer
 .. ..****** ******* ******** .*

105. spacer 2.15|1144266|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 10, identity: 0.688 

catctatttatctcgccgcgattggcgataac	CRISPR spacer
agcacgtttatcacgccgcgtttggcgatcgc	Protospacer
 .. ..****** ******* ******** .*

106. spacer 2.15|1144266|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 10, identity: 0.688 

catctatttatctcgccgcgattggcgataac	CRISPR spacer
agcacgtttatcacgccgcgtttggcgatccc	Protospacer
 .. ..****** ******* ********  *

107. spacer 2.15|1144266|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021127 (Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence) position: , mismatch: 10, identity: 0.688 

catctatttatctcgccgcgattggcgataac	CRISPR spacer
agcacgtttatcacgccgcgtttggcgatcgc	Protospacer
 .. ..****** ******* ******** .*

108. spacer 2.15|1144266|32|NZ_CP022154|PILER-CR,CRISPRCasFinder,CRT matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 10, identity: 0.688 

catctatttatctcgccgcgattggcgataac	CRISPR spacer
agcacgtttatcacgccgcgtttggcgatcgc	Protospacer
 .. ..****** ******* ******** .*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 262058 : 304334 34 Stx2-converting_phage(38.46%) transposase NA
DBSCAN-SWA_2 730443 : 793089 59 Stx2-converting_phage(35.29%) integrase,transposase,tRNA attL 750529:750545|attR 805027:805043
DBSCAN-SWA_3 807491 : 830051 18 Escherichia_phage(33.33%) transposase NA
DBSCAN-SWA_4 873265 : 915839 43 Stx2-converting_phage(38.46%) integrase,transposase,protease,tRNA attL 864976:864991|attR 926592:926607
DBSCAN-SWA_5 1354987 : 1418801 49 Escherichia_phage(35.71%) integrase,transposase,protease,tRNA attL 1349574:1349593|attR 1402169:1402188
DBSCAN-SWA_6 1798361 : 1901836 96 Escherichia_phage(39.68%) head,lysis,holin,protease,terminase,integrase,capsid,plate,tail,transposase,tRNA,portal attL 1791626:1791644|attR 1910566:1910584
DBSCAN-SWA_7 2297620 : 2316221 23 Escherichia_phage(65.0%) integrase,tRNA attL 2296036:2296095|attR 2313556:2314324
DBSCAN-SWA_8 2414400 : 2560376 109 Escherichia_phage(33.33%) integrase,transposase attL 2480846:2480905|attR 2504710:2505529
DBSCAN-SWA_9 2566981 : 2609425 48 Enterobacteria_phage(41.46%) head,lysis,terminase,capsid,tail,transposase,portal NA
DBSCAN-SWA_10 2618036 : 2714663 119 Escherichia_phage(34.57%) lysis,coat,protease,terminase,plate,tail,transposase NA
DBSCAN-SWA_11 2718699 : 2755626 61 Enterobacteria_phage(31.91%) head,lysis,capsid,tail,portal NA
DBSCAN-SWA_12 3519303 : 3615553 120 Salmonella_phage(27.27%) head,holin,terminase,integrase,tail,transposase,tRNA attL 3598379:3598393|attR 3619919:3619933
DBSCAN-SWA_13 3629538 : 3682250 47 Enterobacterial_phage(25.0%) transposase NA
DBSCAN-SWA_14 4172820 : 4204958 27 Acidithiobacillus_phage(25.0%) integrase,transposase,protease attL 4162389:4162404|attR 4192853:4192868
DBSCAN-SWA_15 4209013 : 4262050 53 Streptococcus_phage(14.29%) integrase,transposase,protease attL 4206319:4206333|attR 4217501:4217515
DBSCAN-SWA_16 4289196 : 4352547 55 Escherichia_phage(12.5%) transposase NA
DBSCAN-SWA_17 4488118 : 4547222 54 Vibrio_phage(13.33%) integrase,transposase,protease,tRNA attL 4488047:4488062|attR 4552273:4552288
DBSCAN-SWA_18 4772967 : 4895551 118 Enterobacteria_phage(36.36%) head,protease,terminase,plate,tail,capsid,integrase,tRNA,portal attL 4835893:4835937|attR 4866272:4866316

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP022156
Click the left colored region to show detailed information

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 54183 : 69076 17 Bacillus_phage(16.67%) NA NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP022157
Click the left colored region to show detailed information

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 18815 : 46769 26 Escherichia_phage(44.44%) transposase,protease NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage