CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP008813	Streptococcus agalactiae strain C001 chromosome, complete genome	3 crisprs	cas3,DinG,RT,cas9,cas1,cas2,csn2,csm6,DEDDh	6	20	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008813_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008813_1

936737-937959

TypeII

II-A

Consensus_repeat	Method
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	PILER-CR

18 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP008813_1

>merge|NZ_CP008813|1|936737-937959|CRISPRCasFinder,CRT,PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATCACCGTATGAAATCCATTCACCGTGATGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATCACCGTATGAAATCCATTCACCGTGATGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGTCAATTTTCGTGTAAAGGAGGTAACTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAAACGATTATGTTTGTGCTATGTGCGGCGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATCACCGTATGAAATCCATTCACCGTGATGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATCACCGTATGAAATCCATTCACCGTGATGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAACAAAATTGAATATAGGGATTTAAATGGTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATTTATCATCACTAAATATTTATCTCCACTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACACATTTAACAGGTAGTTAATATCCTCATCGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTAAAAAATACCAACTATCAAAAGTGATAGTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCGTAGTAGTTATTCCAATTCTCTATATGTAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAACCACTTGATGCTGTATCTCTCATAAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATTGTGATACAGATAGTTTATACCTAAAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGGTTTAATACTGTAAATTGTTCAATATCAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCCCTCAATTTATTGACATTATTAATATAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAAAAGAGCCAGAAACTCAATCAGAAGAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGGTGTTGGCTGTTCTGGGATGACTACGTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTTAATATCGTCTATATAGATTCCTGGACGGTTTTAGAGCTGCGCGGTTATTATGCTATGCTAGGA

>NZ_CP008813|1|1|936737-937893|CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATCACCGTATGAAATCCATTCACCGTGATG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATCACCGTATGAAATCCATTCACCGTGATG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGTCAATTTTCGTGTAAAGGAGGTAACTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAACGATTATGTTTGTGCTATGTGCGGCG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATCACCGTATGAAATCCATTCACCGTGATG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATCACCGTATGAAATCCATTCACCGTGATG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AACAAAATTGAATATAGGGATTTAAATGGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATTTATCATCACTAAATATTTATCTCCACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACATTTAACAGGTAGTTAATATCCTCATCG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAAAAAATACCAACTATCAAAAGTGATAGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CGTAGTAGTTATTCCAATTCTCTATATGTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAACCACTTGATGCTGTATCTCTCATAAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATTGTGATACAGATAGTTTATACCTAAAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGTTTAATACTGTAAATTGTTCAATATCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCCTCAATTTATTGACATTATTAATATAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAAAGAGCCAGAAACTCAATCAGAAGAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGTGTTGGCTGTTCTGGGATGACTACGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>NZ_CP008813|1|1|936737-937959|CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATCACCGTATGAAATCCATTCACCGTGATG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATCACCGTATGAAATCCATTCACCGTGATG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGTCAATTTTCGTGTAAAGGAGGTAACTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAACGATTATGTTTGTGCTATGTGCGGCG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATCACCGTATGAAATCCATTCACCGTGATG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATCACCGTATGAAATCCATTCACCGTGATG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AACAAAATTGAATATAGGGATTTAAATGGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATTTATCATCACTAAATATTTATCTCCACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACATTTAACAGGTAGTTAATATCCTCATCG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAAAAAATACCAACTATCAAAAGTGATAGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CGTAGTAGTTATTCCAATTCTCTATATGTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAACCACTTGATGCTGTATCTCTCATAAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATTGTGATACAGATAGTTTATACCTAAAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGTTTAATACTGTAAATTGTTCAATATCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCCTCAATTTATTGACATTATTAATATAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAAAGAGCCAGAAACTCAATCAGAAGAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGTGTTGGCTGTTCTGGGATGACTACGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTAATATCGTCTATATAGATTCCTGGACG
GTTTTAGAGCTGCGCGGTTATTATGCTATGCTAGGA

>NZ_CP008813|1|1|937133-937893|PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AACAAAATTGAATATAGGGATTTAAATGGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATTTATCATCACTAAATATTTATCTCCACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACATTTAACAGGTAGTTAATATCCTCATCG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAAAAAATACCAACTATCAAAAGTGATAGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CGTAGTAGTTATTCCAATTCTCTATATGTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAACCACTTGATGCTGTATCTCTCATAAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATTGTGATACAGATAGTTTATACCTAAAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGTTTAATACTGTAAATTGTTCAATATCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCCTCAATTTATTGACATTATTAATATAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAAAGAGCCAGAAACTCAATCAGAAGAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGTGTTGGCTGTTCTGGGATGACTACGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008813.1\|WP_000159230.1\|926225_926597_+\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NZ_CP008813.1\|WP_000168908.1\|945581_948374_+\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NZ_CP008813.1\|WP_000621138.1\|944530_944995_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP008813.1\|WP_088881668.1\|930662_934775_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NZ_CP008813.1\|WP_069107285.1\|935642_935984_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP008813.1\|WP_000653357.1\|929726_930383_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_CP008813.1\|WP_025194971.1\|943862_944522_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_CP008813.1\|WP_017646500.1\|950538_951627_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP008813.1\|WP_000438313.1\|938499_938916_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_CP008813.1\|WP_001241816.1\|926621_927002_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131381
NZ_CP008813.1\|WP_000914667.1\|927094_928225_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_CP008813.1\|WP_000929493.1\|934776_935646_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP008813.1\|WP_000065324.1\|948373_949477_+\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NZ_CP008813.1\|WP_069107282.1\|949595_950234_-\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_CP008813.1\|WP_000323544.1\|928966_929737_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_CP008813.1\|WP_000678290.1\|941129_943763_+\|pneumococcal-type-histidine-triad-protein	unknown	unknown	gnl\|CDD\|380193
NZ_CP008813.1\|WP_000590706.1\|935970_936636_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	pfam09711_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_CP008813.1\|WP_001019133.1\|939051_940884_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP008813.1\|WP_000665410.1\|944994_945429_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_CP008813.1\|WP_000523796.1\|928228_928966_+\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738

Protein	Function_ID	Function_description	E-value
NZ_CP008813.1\|WP_000159230.1\|926225_926597_+\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	3.86733e-28
NZ_CP008813.1\|WP_000168908.1\|945581_948374_+\|cation-transporting-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_CP008813.1\|WP_000621138.1\|944530_944995_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.77562e-18
NZ_CP008813.1\|WP_088881668.1\|930662_934775_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
NZ_CP008813.1\|WP_069107285.1\|935642_935984_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	9.58455e-52
NZ_CP008813.1\|WP_000653357.1\|929726_930383_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	9.75792e-52
NZ_CP008813.1\|WP_025194971.1\|943862_944522_+\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	7.08573e-33
NZ_CP008813.1\|WP_017646500.1\|950538_951627_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	5.98366e-44
NZ_CP008813.1\|WP_000438313.1\|938499_938916_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	6.25805e-79
NZ_CP008813.1\|WP_001241816.1\|926621_927002_+\|hypothetical-protein	gnl\|CDD\|131381	TIGR02328, TIGR02328, conserved hypothetical protein. Members of this protein are found in a small number of taxonomically well separated species, yet are strongly conserved, suggesting lateral gene transfer. Members are found in Treponema denticola, Clostridium acetobutylicum, and several of the Firmicutes. The function of this protein is unknown. [Hypothetical proteins, Conserved].	6.45558e-80
NZ_CP008813.1\|WP_000914667.1\|927094_928225_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_CP008813.1\|WP_000929493.1\|934776_935646_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.68617e-138
NZ_CP008813.1\|WP_000065324.1\|948373_949477_+\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	2.245e-105
NZ_CP008813.1\|WP_069107282.1\|949595_950234_-\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	1.25328e-70
NZ_CP008813.1\|WP_000323544.1\|928966_929737_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.19143e-132
NZ_CP008813.1\|WP_000678290.1\|941129_943763_+\|pneumococcal-type-histidine-triad-protein	gnl\|CDD\|380193	NF033189, internalin_A, class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.	8.21797e-22
NZ_CP008813.1\|WP_000590706.1\|935970_936636_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.61399e-122
NZ_CP008813.1\|WP_001019133.1\|939051_940884_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP008813.1\|WP_000665410.1\|944994_945429_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	6.40832e-86
NZ_CP008813.1\|WP_000523796.1\|928228_928966_+\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	1.5045e-110

>NZ_CP008813.1|WP_000590706.1|935970_936636_+|type-II-A-CRISPR-associated-protein-Csn2
MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
>NZ_CP008813.1|WP_069107285.1|935642_935984_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTETTEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNTANNAMIGRLKVNNPKKGNITLLTVTEKQFARMVYLHGERNTSVANSDSRLVFLGDSYDQD
>NZ_CP008813.1|WP_000929493.1|934776_935646_+|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDSYQTEMIHLSEIDILIMETTDIVLSTMLIKRLVDENILVIFCNDKRLPTAMLMPYYARHDSSLQLSRQMSWIEDVKADVWTSIIAQKILNQSFYLGECSFFEKSQSIMNLYHDLEPFDPSNREGHAARIYFNTLFGNDFSREQDNPINAGLDYGYSLLLSMFAREVVKCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIIYENRQSDFVKMKRELFSMFSETYSYNGKEMYLSNIVSDYTKKVIKSLNSDGNGIPEFRI
>NZ_CP008813.1|WP_088881668.1|930662_934775_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MNKPYSIGLDIGTNSVGWSIITDDYKVPAKKMRVLGNTDKEYIKKNLIGALLFDGGNTASDRRLKRTARRRYTRRRNRILYLQEIFAEEMSKVDDSFFHRLEDSFLVEDDKRGSKYPIFATMQEEKDYHEKFPTIYHLRKELADKKEKADLRLFYLALAHIIKFRGHFLIEDDSFDVRNTDIQRQYQAFLEIFDTTFENNHLLSQNIDVEGILTDKISKSAKKDRILAQYPNQKSTGIFAEFLKLIVGNQADFKKHFNLEDKTPLQFAKDSYDEDLENLLGQIGDEFADLFSVAKKLYDSVLLSGILTVTDLSTKAPLSASMIQRYDEHREDLKQLKQFVKASLPEKYQEIFTDSSKDGYAGYIEGKTNQGAFYKYLSKLLTKQEGSEYFLEKIKNEDFLRKQRTFDNGSIPHQVHLTELKAIIRRQSEYYPFLKENLDRIEKILTFRIPYYVGPLAREKSDFAWMTRKTDDSIRPWNFEELVDKEASAEAFIHRMTNNDLYLPEEKVLPKHSLIYEKFTVYNELTKVRYKNEQGETYFFDSNIKQEIFDGVFKEHRKVSKKKLLDFLAKEYEEFRIVDVIGLDKENKAFNASLGTYHDLKKILDKDFLDNPDNESILEDIVQTLTLFEDREMIKKRLENYKDLFTESQLKKLYRRHYTGWGRLSAKLINGIRDKESQKTILDYLIDDGKSNRNFMQLIHDDGLSFKSIISKAQAGSHSDNLKEVVGELAGSPAIKKGILQSLKIVDELVKVMGYEPEQIVVEMARENQTTNQGRRNSRQRYKLLDDGVKNLASDLNGNILKEYPTDNQALQNERLFLYYLQNGRDMYTGKALDIDNLSQYDIDHIIPQAFIKDDSIDNRVLVSSAKNRGKSDDVPSLEIVKDCKVFWKKLLDAKLMSQRKYDNLTKAERGGLTSDDKARFIQRQLVETRQITKHVARILDERFNNELDSKGRRIRKVKIVTLKSNLVSNFRKEFGFYKIREVNNYHHAHDAYLNAVVAKAILTKYPQLEPEFVYGDYPKYNSYKTRKSATEKLFFYSNIMNFFKTKVTLADGTVVVKDDIEVNNDTGEIVWDKKKHFATVRKVLSYPQVNIVKKTEIQTGGFSKESILAHGNSDKLIPRKTKDIYLDPKKYGGFDSPIVAYSVLVVADIKKGKAQKLKTVTELLGITIMERSRFEKNPSAFLESKGYLNIRDDKLMILPKYSLFELENGRRRLLASAGELQKGNELALPTQFMKFLYLASRYNELKGKPEEIEQKQEFVVQYVSYFDDILQIINDFSNRVILADANLEKINKLYQDNKENISVDELANNIINLFTFTSLGAPAAFKFFDKIVDRKRYTSTKEVLNSTLIHQSITGLYETRIDLGKLGED
>NZ_CP008813.1|WP_000653357.1|929726_930383_+|TIGR01906-family-membrane-protein
MKDKLLVVLTWIWIISLATLATIYIAWLIYPIEIQFLKLEKVVYLKAETIYYNFNKLMIYLTHPFISDLNMPSFPSSEDGLKHFADVKYLFTLAHGLFVILTFPVIYFLRRGWKQKSIFLYEGFFKIAIMLPIFIVVCAFLLGFDQFFTLFHEVLFPGDSTWQFNPLTDPVIWILPETFFLHCFIIFLLIYETITIILLIIGRKHLKLRKYKNKMQAL
>NZ_CP008813.1|WP_000323544.1|928966_929737_+|TIGR01457-family-HAD-type-hydrolase
MAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
>NZ_CP008813.1|WP_000523796.1|928228_928966_+|acyl-ACP-thioesterase
MGLLYRETYEVPFYESDTNHYMKLPQLLALALQISAKQSLKLGIGDDIVFKRYGLVWVVTDYIIDIERLPKHAEKIVIETEAKAHNKLLCYRYFYIYGEDGQKIITISSAFVLMDFKTRKIHPVLDDITSIYQSQRIKKVIRGPKYHPIGDSKVKQYHVRYFDLDMNGHVNNSKYLEWMYDVLDLDFLSSHIPKKIDLKYIKEIQYGTDIKSHWYQDGLVTRHDIIGGDSIHAQARIEWQEKKED
>NZ_CP008813.1|WP_000914667.1|927094_928225_+|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIREFRSYDITELRTLYIGGGTPTSISAVQLDYLLTELTRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFNDKHLKRIGRSHNEAQIYSTIDDLKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPIQHYLKGVSEGNARLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENNGFIQMTKKGLFLGDTVAEKFIVE
>NZ_CP008813.1|WP_001241816.1|926621_927002_+|hypothetical-protein
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAEYRGMKCPRYDTLNPVDLETPIYPEHNQDYLQECLWNLKAKGIDLPINKIK
>NZ_CP008813.1|WP_000159230.1|926225_926597_+|YbgA-family-protein
MTKEAELLWAKHKYLVLSKSQKIYLDIRQTLKSPNCNVLDVQSLIDQAVLLEESPSQVTNAYMHIWGYFKNKAERQEKEEFLTLLEKYRKTGYQRRKLLAFLKQLLAKYPNSYLQNSSIFEEE
>NZ_CP008813.1|WP_000438313.1|938499_938916_+|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIGVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
>NZ_CP008813.1|WP_001019133.1|939051_940884_+|elongation-factor-4
MNIEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRAEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGEVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTITLANNPAIEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTRVDSIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDDKK
>NZ_CP008813.1|WP_000678290.1|941129_943763_+|pneumococcal-type-histidine-triad-protein
MKGQKIIALAGLVLSCHFALTACHTQEHKNSHHIKTKQVAKKKANKKKVSVKESHKKRKGVAGVDFPTDDGFLLTKDSKILSHTDSGIVVAHGNHSHFIFYSDLKGSKFSYLIPNANAKTNKNQAVRNFKAGAVAVNTLNDGYVFNPADIVSEDANGYVVRHGDHFHYIPKASLSQQKQVQASRAVSRLGNQSNSHYRVNSSKIAGLHHPTSDGFLFNGRGIKGTTPTGILVEHHNHLHFISFADLRKGGWGSIADRYQPQKKADSKKQSPSSKKPRTENTLPKDIKDKLAYLARELHLDISRIRVLKTLNGEIGFEYPHDDHTHVIMAKDIDLSKPIPNPHHDDEDHHKGHHHDESDHKHEEHEHTKSNKLSDEDQKKLIYLAEKLGLNPNQIEVLTSEDGSIIFKYPHDDHSHTIASKDIEIGKPIPDGHHDHSHAKDKVGMATLKQIGFDDEIIQDILHADAPTPFPSNETNPEKMRQWLATVTKINIGQRTNPFQRFGLSLMPNIEVLGIGFTPINDMTPVLQFKKLKQLWMTNTGITDYSFLDKMPLLEGLDISQNGIKDLSFLTKYKQLSLIAAANNGITSLKPLAELPNLQFLVLSHNNISDLTPLSNLTKLQELHLDHNNVKNLSALSGKKDLKVLDLSNNKSADLSTLKTTSLETLLLNETNTSNLSFLKQNPKVSNLTINNAKLASLDGIEESDEIVKVEAEGNQIKSLVLKNKQGSLKFLNVTNNQLTSLEGVNNYTSLETLSVSKNKLESLDIKTPNKTVTNLDFSHNNVPTSQLKLNEKNIPEAVAKNFPAVVEGSMVGNGSLAEKAAMASKEDKQVSDNTNHQKNTEKSAQENADSKKENPKTHDEHHDHEETDHAHVGHHHH
>NZ_CP008813.1|WP_025194971.1|943862_944522_+|HD-domain-containing-protein
MTMVKREDVILNATENMVHHKLKNDPSGHDWFHIVRVRNLAVELAHKEGANIFICQMAALLHDIIDDKICQDSKQASYELTQWLYSQDLAIAEVEHILDILQNISFKAGTGLTMKTLEGKIVQDADRLDAMGAIGIARTMAYSGSKGRLIHDPNLKPRENLTLEEYRNGQDTAIMHFYEKLLKLKDLMNTKQGKMLAQKRHDFLELYLAEFYAEWNGKR
>NZ_CP008813.1|WP_000621138.1|944530_944995_+|GNAT-family-N-acetyltransferase
MIRRAKEKDLPAIAELLKQILVLHHGVRPDIFHTRGSKFSKEQLKEMLIDESKPIFVYESDEGKVVAHLFLQLQEKRDLPRKSFKTLYIDDLCIDEEVRGQQIGQKLMDFARQYAKKHGCYNITLNVWNDNQRAVSFYEKLGFKPQQTQMEEIL
>NZ_CP008813.1|WP_000665410.1|944994_945429_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD
>NZ_CP008813.1|WP_000168908.1|945581_948374_+|cation-transporting-P-type-ATPase
MASTNNVSDTNTRFAKEELEEVFEELGTTQGGLSDEEVAVRQKKYGLNLLSEVKQESIILLFLKNFTSLMAILLWVGGFVAIVSNSLELGLAIWMVNVINGIFSFIQEYRASQATQALKKMLPSYSRVLRKSSEEKILSEQLVPGDIVLIEEGDRISADGRLIKTTDLQVNQSALTGESNPIYKDSNVENDQSKTLIECDNMVFAGTTVSSGSATMVVTAIGMQTQFGQIADLTQGMKSEKSPLQRELDRLTKQISIISITVGIIFFLAATFFVKEPVSKSFIFALGMIVAFIPEGLLPTVTLSLAMAVQRMAKEHALVKKLSSVETLGATSVICSDKTGTLTQNEMTVNRLWQNGKSYQVTGLGYAPEGQILFEGDNICFGNSDRGDLEKLIRFAHLCSNAQVLPPNDDRSTYTVLGDPTEACLNVLLEKSGINRQENRKFAPRLKELPFDSVRKRMTTIHSLGGDEKDKKISITKGAPKEILNLSDYVLSDDKVIPLNKEERNKIQLANDTFAKDGLRVLAVSYCDIEGFSKEQWTQENLEQHMVFIGLIAMSDPPREGVREAIDKCHAASIRIIMVTGDYGLTALSIAKNIGIIRNDNAKVISGLELSEMTDSQLKKELSGEVVFARVAPEQKYRVVTILQEMGEVVAVTGDGVNDAPALKKSDIGVAMGVTGTDVAKESADMILTDDHFASIVHAVEEGRAVYQNIKKFLTYIFNSNTPEAVPSAFFLFSKGFIPLPLTVMQILAVDLGTDMLPALGLGVEPPETDVMNRPPRRLTDRLLDKGLLIKSFLWYGTIESVLAMGGFFWAHYLRYGNFTFFVANGIPYREATTMTLGAIIFSQIGMVMNSRTSYQSIRALSIFGNKLINFGIIMEILAFLVLVYVPPFHNLFNTASLGLSHWLYLISCPFIMIGLDEVRKLFSSRKNKR
>NZ_CP008813.1|WP_000065324.1|948373_949477_+|DUF2974-domain-containing-protein
MSNIITYLKNNSNLTFDELALNDVDILCLNEFGYISFEKLINTTEMKSVLVCELYHEYLQTMAKSYSFMFTSQRHDLCQLMMTSKRFKNLTLSYYRAEVSLEFEKQFAAMVFTIPNIDYHQVVFRGTDANLIGWKEDFKLTYMREISAHRSAIKYLNTILPYFDKVVLSGHSKGGNLALYAAMFTKPDLKAKIDLIWLIDSPGLQKTLLPTTEYKTTKQKCIRLLPEESIVGMMLYSDIEPLIISSNARGILQHDVTTWEIQEPAILKTGAGLSLKSICFEKTFQQWMAELKSQERKLFFDLLFDSFLSSGVSSLDDFNLASRAKMMKAFHSFRELDDDKKRLFNKSLKLLVTIFWGAYHDNSRKTK
>NZ_CP008813.1|WP_069107282.1|949595_950234_-|CatB-related-O-acetyltransferase
MASILKKHLEKRLELKNDPMRTDMSTGASYPKYGFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTITGMNHPTDHITTNPFIYYKSRGFINEDRADLIDEKKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDISDYAVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL
>NZ_CP008813.1|WP_017646500.1|950538_951627_-|site-specific-integrase
MRIESYKKKNGTTAYKFLLYAGYVDGKRKYIRRSGFSTRQSARAALINLQAELEKPKSSMTFGMLTKQWLKEYEKTVQGSTYLKTERNINKHILPKLDKVTIGDINPLLVQNLTEEWCSQLKYGGKILGLVRNILNLAVRYGYISNNPALPITAPKIKRERKTGNNFYTLNQLKQFLELVEKTDNIEKIALFRLLAFTGIRKGELLALTWDDLNRNTLSINKAVTRTQTGLEIDVTKTKSSDRLISLDDETLEILQQLHETFPSSTFMFQSESGGIMTPSLPRKWLLQIIKGTDLPQITVHGFRHTHASLLFESGLSLKQVQHRLGHGDLQTTMNVYTHITQSAIDDIGTKFNQFVTNKQLN

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Crispr_ID: NZ_CP008813_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008813_2

1515624-1516757

Orphan

Consensus_repeat	Method
NGCGCTNGTNCTNGCTGA	CRT

16 spacers

The CRISPR arrays of NZ_CP008813_2

>merge|NZ_CP008813|2|1515624-1516757|CRT
AGCGCTGGTACTTGCTGACGTCGATGCACTCATTGAAGCGCTAGTGCTGGCTGATGTCGATGCACTCATTGAGGCACTGGTGCTGGCTGACATTGATGCACTCGTTGAAGCGCTGGTGCTGGCTGACGTTGAGGCACTTGTGGAAGCGCTGGTACTTGCTGATGTCGATGCACTTGTTGAAGCACTTGTTGAGGCGCTAGTACTTGCTGACATTGATGCACTCATTGAAGCACTTGTACTGGCTGACATCGATGCACTCATTGAGGCGCTAGTACTTGCTGACGTGGAAGCACTCGTACTTGCACTTGTTGAAGCGCTAGTGCTGGCTGACGTCGATGCACTCGTTGAGGCACTTGTGCTGGCTGACGTCGATGCACTCATTGAAGCACTGGTGCTGGCTGACATTGATACACTCGTTGAGGCGCTGGTGCTGGCTGACATTGATGCACTCGTTGAGGCGCTGGTACTTGCTGACGTGGAAGCACTCGTACTTGCACTTGTTGAAGCGCTAGTGCTGGCTGACGTCGATGCACTCATTGAGGCACTGGTGCTGGCTGACGTCGATGCACTCATTGAAGCACTGGTGCTGGCTGACATTGATGCACTCGTTGAGGCGCTGGTACTTGCTGATGTGGAAGCACTGGTACTTGCTGATGTGGAAGCGCTAGTGCTGGCTGACATCGATGCACTCATTGAGGCGCTAGTACTTGCTGATGTGGAAGCACTGGTACTTGCTGATGTGGAAGCGCTAGTGCTGGCTGACGTCAAGGCACTCATTGAAGCGCTAGTGCTGGCTGATGTCGATGCACTCATTGAGGCACTTGTGCTGGCTGACATTGATGCACTCGTTGAGGCGCTGGTGCTGGCTGACGTTGAGGCACTTGTGGAAGCGCTGGTACTTGCTGATGTCGAAGCACTTGTGGAAGCACTTGTTGAGGCGCTAGTACTTGCTGACGTGGAAGCGCTAGTGCTGGCTGACGTGGAGGCACTTGTGGAAGCGCTAGTACTTGCTGACGTCGACGCACTCGTTGAGGCGCTCATACTTGCACTTGTGGAAGCACTGGTACTTGCTGATGTCGATGCACTCATTGAAGCGCTAGTGCTTGCCGAAGTTGAAGCACTGGTACTAGCTGA

>NZ_CP008813|2|2|1515624-1516757|CRT
AGCGCTGGTACTTGCTGA	CGTCGATGCACTCATTGAAGCGCTAGTGCTGGCTGATGTCGATGCACTCATTGAGGCACTGGTGCTGGCTGACATTGATGCACTCGTTGA
AGCGCTGGTGCTGGCTGA	CGTTGAGGCACTTGTGGAAGCGCTGGTACTTGCTGATGTCGATGCACTTGTTGAAGCACTTGTTGAGGCGCTAGTACTTGCTGACATTGATGCACTCATTGA
AGCACTTGTACTGGCTGA	CATCGATGCACTCATTGAGGCGCTAGTACTTGCTGACGTGGAAGCACTCGTACTTGCACTTGTTGAAGCGCTAGTGCTGGCTGACGTCGATGCACTCGTTGA
GGCACTTGTGCTGGCTGA	CGTCGATGCACTCATTGAAGCACTGGTGCTGGCTGACATTGATACACTCGTTGAGGCGCTGGTGCTGGCTGACATTGATGCACTCGTTGA
GGCGCTGGTACTTGCTGA	CGTGGAAGCACTCGTACTTGCACTTGTTGAAGCGCTAGTGCTGGCTGACGTCGATGCACTCATTGA
GGCACTGGTGCTGGCTGA	CGTCGATGCACTCATTGAAGCACTGGTGCTGGCTGACATTGATGCACTCGTTGA
GGCGCTGGTACTTGCTGA	TGTGGAAGCACTGGTACTTGCTGATGTGGA
AGCGCTAGTGCTGGCTGA	CATCGATGCACTCATTGA
GGCGCTAGTACTTGCTGA	TGTGGAAGCACTGGTACTTGCTGATGTGGA
AGCGCTAGTGCTGGCTGA	CGTCAAGGCACTCATTGA
AGCGCTAGTGCTGGCTGA	TGTCGATGCACTCATTGAGGCACTTGTGCTGGCTGACATTGATGCACTCGTTGA
GGCGCTGGTGCTGGCTGA	CGTTGAGGCACTTGTGGA
AGCGCTGGTACTTGCTGA	TGTCGAAGCACTTGTGGAAGCACTTGTTGA
GGCGCTAGTACTTGCTGA	CGTGGAAGCGCTAGTGCTGGCTGACGTGGAGGCACTTGTGGA
AGCGCTAGTACTTGCTGA	CGTCGACGCACTCGTTGAGGCGCTCATACTTGCACTTGTGGA
AGCACTGGTACTTGCTGA	TGTCGATGCACTCATTGAAGCGCTAGTGCTTGCCGAAGTTGA
AGCACTGGTACTAGCTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008813.1\|WP_069107329.1\|1526010_1526751_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP008813.1\|WP_001263855.1\|1508360_1509557_-\|SP_1767-family-glycosyltransferase	unknown	unknown	gnl\|CDD\|163440
NZ_CP008813.1\|WP_000772265.1\|1507007_1508237_-\|accessory-Sec-system-protein-translocase-subunit-SecY2	unknown	unknown	gnl\|CDD\|237095
NZ_CP008813.1\|WP_000244046.1\|1529207_1530449_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|376723
NZ_CP008813.1\|WP_001263774.1\|1514111_1515119_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|236626
NZ_CP008813.1\|WP_069107330.1\|1527527_1528841_-\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237046
NZ_CP008813.1\|WP_017647001.1\|1509617_1510493_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP008813.1\|WP_000863865.1\|1528901_1529030_-\|DUF4044-domain-containing-protein	unknown	unknown	gnl\|CDD\|338651
NZ_CP008813.1\|WP_000656279.1\|1526900_1527251_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008813.1\|WP_000502594.1\|1527343_1527502_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008813.1\|WP_000567071.1\|1520671_1522663_-\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP008813.1\|WP_047210168.1\|1522723_1523521_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP008813.1\|WP_000571942.1\|1519080_1520574_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|285470
NZ_CP008813.1\|WP_015058668.1\|1503897_1505457_-\|accessory-Sec-system-protein-Asp2	unknown	unknown	gnl\|CDD\|274739
NZ_CP008813.1\|WP_000795052.1\|1510485_1511670_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|133037
NZ_CP008813.1\|WP_000681005.1\|1523827_1526011_+\|ABC-transporter-substrate-binding-protein/permease	unknown	unknown	gnl\|CDD\|270337
NZ_CP008813.1\|WP_000104401.1\|1502908_1503901_-\|accessory-Sec-system-protein-Asp3	unknown	unknown	gnl\|CDD\|163423
NZ_CP008813.1\|WP_069107327.1\|1512897_1514103_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133037
NZ_CP008813.1\|WP_001883265.1\|1511659_1512901_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|133037
NZ_CP008813.1\|WP_000468344.1\|1505463_1507008_-\|accessory-Sec-system-protein-Asp1	unknown	unknown	gnl\|CDD\|293598

Protein	Function_ID	Function_description	E-value
NZ_CP008813.1\|WP_069107329.1\|1526010_1526751_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	9.14907e-157
NZ_CP008813.1\|WP_001263855.1\|1508360_1509557_-\|SP_1767-family-glycosyltransferase	gnl\|CDD\|163440	TIGR03728, glyco_access_1, glycosyltransferase, SP_1767 family. Members of this protein family are putative glycosyltransferases. Some members are found close to genes for the accessory secretory (SecA2) system, and are suggested by Partial Phylogenetic Profiling to correlate with SecA2 systems. Glycosylation, therefore, may occur in the cytosol prior to secretion.	1.64361e-161
NZ_CP008813.1\|WP_000772265.1\|1507007_1508237_-\|accessory-Sec-system-protein-translocase-subunit-SecY2	gnl\|CDD\|237095	PRK12417, secY, preprotein translocase subunit SecY; Reviewed.	5.57792e-162
NZ_CP008813.1\|WP_000244046.1\|1529207_1530449_+\|aminopeptidase	gnl\|CDD\|376723	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29).	0
NZ_CP008813.1\|WP_001263774.1\|1514111_1515119_-\|sugar-transferase	gnl\|CDD\|236626	PRK09814, PRK09814, sugar transferase.	1.32472e-149
NZ_CP008813.1\|WP_069107330.1\|1527527_1528841_-\|GTPase-ObgE	gnl\|CDD\|237046	PRK12297, obgE, GTPase CgtA; Reviewed.	0
NZ_CP008813.1\|WP_017647001.1\|1509617_1510493_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	2.4558e-33
NZ_CP008813.1\|WP_000863865.1\|1528901_1529030_-\|DUF4044-domain-containing-protein	gnl\|CDD\|338651	pfam13253, DUF4044, Protein of unknown function (DUF4044). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 42 and 56 amino acids in length. There is a single completely conserved residue M that may be functionally important.	1.85741e-06
NZ_CP008813.1\|WP_000567071.1\|1520671_1522663_-\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP008813.1\|WP_047210168.1\|1522723_1523521_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	8.58882e-12
NZ_CP008813.1\|WP_000571942.1\|1519080_1520574_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|285470	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain. Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This corresponds to the PRD like region.	6.25568e-24
NZ_CP008813.1\|WP_015058668.1\|1503897_1505457_-\|accessory-Sec-system-protein-Asp2	gnl\|CDD\|274739	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP008813.1\|WP_000795052.1\|1510485_1511670_-\|hypothetical-protein	gnl\|CDD\|133037	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.	2.1511e-73
NZ_CP008813.1\|WP_000681005.1\|1523827_1526011_+\|ABC-transporter-substrate-binding-protein/permease	gnl\|CDD\|270337	cd13619, PBP2_GlnP, Glutamine-binding domain of ABC transporter, a member of the type 2 periplasmic binding fold protein superfamily. Periplasmic glutamine binding domain GlnP serves as an initial receptor in the ABC transport of glutamine in eubacteria. GlnP belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.85761e-106
NZ_CP008813.1\|WP_000104401.1\|1502908_1503901_-\|accessory-Sec-system-protein-Asp3	gnl\|CDD\|163423	TIGR03711, acc_sec_asp3, accessory Sec system protein Asp3. This protein is designated Asp3 because, along with SecY2, SecA2, and other proteins it is part of the accessory Sec system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.45251e-61
NZ_CP008813.1\|WP_069107327.1\|1512897_1514103_-\|glycosyltransferase	gnl\|CDD\|133037	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.	7.75973e-69
NZ_CP008813.1\|WP_001883265.1\|1511659_1512901_-\|hypothetical-protein	gnl\|CDD\|133037	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.	2.04265e-75
NZ_CP008813.1\|WP_000468344.1\|1505463_1507008_-\|accessory-Sec-system-protein-Asp1	gnl\|CDD\|293598	pfam16993, Asp1, Accessory Sec system protein Asp1. Asp1, along with SecY2, SecA2, and other proteins forms part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. Asp1 is predicted to be cytosolic.	0

>NZ_CP008813.1|WP_001263774.1|1514111_1515119_-|sugar-transferase
MRVHITSIYGQSPRSIALISQKLVKDVGRQLGYDEMGIYFYNDHAETHGERSTRMDGIIAGLGRGDIVVFQVPTWNSTEFDELFLDKLQAYGARIITFVHDIVPLMFESNFYLLDRVIDMYNRSDVVILPTKAMHDYLIEKGMTTSKVLYQEVWDHPINIDLPRPEYQKVLSFAGDIQRFPFVNDWKENIPLIYYGDGSRLNSEANVHAQGWKDDVELMLSLSKRGGFGLCWSEDREELVERRYSRMNASYKLSTFLAAGLPIIANHDISSRDFIKQHGLGFTVETLEEAVEKINNMEKETYDSYVENVEKIATLLRNGYITKKLLIDAVHMLYR
>NZ_CP008813.1|WP_069107327.1|1512897_1514103_-|glycosyltransferase
MKKTIVLGADFQYRDQVMTTIKSIVSHNQHLTIYIINTDFPVEWFNILNHSLEQFDCRVKNIPISSDVFEGIPTLSHISVAGFFRWFIPIHLEEETVLYLDSDVIVRGSLDPLFDINLEENLLGAVADHFSTLYYGNTAPVSFNSGVMLINNSLWKKEEIYNSLMRIADKGSAVGVGDQEYLNILTQNRWIDIGKQYNVQIDQDVNINAYGRLDLYHFYDDCEPVVVHYNSQDKPWNKYSQSRYRSEWWYYFGLEWSVIYAQQQKNLNRLTGKTLNLFTLTASDTLEHIEVLAKALPDYQFHIAARSDISEKLANLETYSNIKVYKLVINPILEELIRNCDVYLDINHSYEVEGILDKIKEENKPILAFDSTAHTTKNIEVISETMPELMVKRIREVGPLR
>NZ_CP008813.1|WP_001883265.1|1511659_1512901_-|hypothetical-protein
MKNRKAIALAADFGYREQVKTIIKSICFHNQFIDFYILNDDFPVEWFQMMEYHLSKMDCTISNTKIFNEEIKHFKFQKPMPYPTYFRYFIPEVIHEDKVLYLDCDMIITSDLTSIFTLDISKYGVAAVRDDLLEEYDGKEDYFNSGLLLINNIFWREQGISQRLLDYTRENQGVLQYHDQDVLNDVLCDNWLELDETYNYHTGADMLYNLFQQSERQLNRRKDLPKVIHYTATKPWKYLETSVRWRDIWWEYNRLEWSDIFTRWQVNDGVEVSLKKVLQPIHRAFIFTYSDSIEGIERLAKDLPNWQFHIAAYTQISEKLKQLEMYSNIKLYPLVYRFKLNELVENSDIYLDINHGAADTQVLEQVKKLGKDILSLSTTYHGQGKQFERVTDIIDYLKNERFKEHIRKEYCEK
>NZ_CP008813.1|WP_000795052.1|1510485_1511670_-|hypothetical-protein
MKNNVICLAGDNKSLNQIQTVIKSILCHNDRVSIYILNQDIASEWFRNIQRRLLNSHSCIFDIKLFDDTFKEFKTPRAHITYMAYARYYIPQLIDAEKVLYLDIDTLVVDNLDKLFEIELGDYPIAAILDGDGIHFNSGVMLINSLYWMRYRVTEKLLEITERELDNGIFGDQGVLNLLFDNNWLKLEDKYNAQVGNDLGAFYENWQGYFDRNFESPTIIHYCTHDKPWNTFSSSRFRETWWQYEQLDWNEVFNFETYLLPEPTFEKHFFTFTTSVDLLYIEELVELFPNSCFHIAAWTSFGPRLLKLATNSNVRLYPSITSPLFEQLMTKANYYLDISTSWKEIQFCQKAIEKSIPILSFNETVTIEYRELSHCFINLEDMRQFLCKNGGNSD
>NZ_CP008813.1|WP_017647001.1|1509617_1510493_-|glycosyltransferase-family-2-protein
MTDKLVSVIIPVYNAAPYLEGCVNTILGQTYQVFEILLIDDGSTDTSASICDQLSLRDNRIRVFHIENGGASKARNFGLARISPESQFVTFVDSDDWVKENYLEVLLAQQEKYNADIVISNYYIYRETEDIFGYYITDKDFVIEEISAQTAIDRQVHWQLNSSVFIVIWGKLYRRELFDTITFPIDKVFEDELVSVLLFIKSKKTILVNGSYYGYRIRPNSIMTSAFSSKRAEDLIYIFDSKLSEIILSGLDSTATVERYFWLMRDYKQRLEQENLQKTIIYKVISNRLSR
>NZ_CP008813.1|WP_001263855.1|1508360_1509557_-|SP_1767-family-glycosyltransferase
MRVIKVKTISETLDYISKHTASVARFGDGEIDIIAGNSIPYQVYDSELAKRLKRLLNRQSNEKLVICVSDVFDNLGRYNDFSQQFWRGHLYQYNDLYQKNCQAEWYGSTFISRPYMDLLDKSLSVTYFEQLKALWKNKDILIVEGETSRSGVGNDLFNDANTISRIICPSKDAFSSFYEIKETILEHSRGKLILLMLGPTAKLLAEDLSQLGHQAIDLGHIDSEYEWFKMGAVSKVKLSHKHTAEHNFDEDITLIEDNSYENQIVSKIGTSDRQYALTVTLTDDIWELEHLLQRCPNTDFHIAAPVYCSDRLKQLVGYPNYYLHEAITEEQFEVLLLNSDIYLDINHGEEVWNVVDRCITEGKTIYGIRRARKDNQYISFERTMDDFEYLCDTIKQNR
>NZ_CP008813.1|WP_000772265.1|1507007_1508237_-|accessory-Sec-system-protein-translocase-subunit-SecY2
MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYKGQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLRLFTIGKYSSGVSQKVQQFRQNVVMLVIATIQGLAIAISFQYHNGFSLTKLLLATMILVTGAYIISWIGNLNAEYGFGGMTILVVVGMLVGQFNNIPLIFELFQDGYQLAIILFLLWTLVAMYLMITFERSEYRIPVMRTSIHNRLVDDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSYNDYFSLSSIQGVVIYMILMFVLSVAFTFVNIDPTKISEAMRESGDFIPNYRPGKETQSYLSKICYLFGTFSGFFMAFLGGGPLLFALGNDDFRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN
>NZ_CP008813.1|WP_000468344.1|1505463_1507008_-|accessory-Sec-system-protein-Asp1
MFHFIPSWYNENRTWYDNNYLWYFKPTNVGFDDTINQMKMFDYAGKESRLVVLNYMPNLRYYLHRYDLLESGYYSVFDDIQEIGNVRQQMIDFRQLNWPEGVDFTYTPFIVLVKKSGDLIAKVQFGEEGNLTHIDYFANEQIAKKYLFDDRGFLSSILYYDNGGEAYQDYLAPSGERIMREYLREGDHHVEINPKKAIHFFKLSYSDIDELIREKYLTYLHKEVSKSDTIIASFNQVHNAFIVGNTSKGNLILSVFSERNNAHNVLEDYSSLSRADAIICDRLDIAAQLKEKIDKPVVHVSPFDTRLALGKSNQVRDLEIYFVVDRLSHKELQKSLTSLYKVMLKNNDIKVTFVSYEREFESRQLMYDYLKEATKVFEQKFFSLSGDDANQVLMQPDEVEKEKTRLSFIHPLSETDIINRLEYVRLIIDISKIPDLYTQIAGISSGIPQINTVLTEFVEHRKNGYVIEEIQELEKAIPYYCEQLTNWNRSLIYSVDKINDYTGGQLVERIINSY
>NZ_CP008813.1|WP_015058668.1|1503897_1505457_-|accessory-Sec-system-protein-Asp2
MSKIKLTILQVGEENWATKENIPNDMEWLFIKPDQISDFVTTENNYLTSSKLLQKLPRKISALLLTEQTYGPELSSLSSFFEVYEVFYPKDKHATGITEEFLRSKMAQRYDSSSPAQLIRQFYKGLFIGQYGEKLQVSQIQIRNDFEGVVNYQGNNYLELEGQFGEDYSFLLNFAYNIPFSSDFYNELFLEHIIEGDIDIRLVISLIVDGSVDDIAKEWYFEKEDLNQLISLESDISGSLAVKLFAKGKGIIKLGPLHRRNGRGGLGTFLLGGERHIDAIGHEFMTYFDPVDFKPPLTVYFSGFRSAEGFEGFWMMKSMKTPFMLICDPRLQGGAFYIGSKEYEQKIVDAIQEKLAFLNFSSDQLILSGLSMGTYGATYHGAKLNPHAIIIGKPIFNLGTVAQRERLERPDGFATSLDIQLLNQGDLTRASSEKLNNHFWKSIEEGDFSNTTFALAYMKNDDYDATAFSDLLQYFRGKKHKILGRGWDGRHGDCSAEVGAWFTSQYRRMLSNDFGRKEE
>NZ_CP008813.1|WP_000104401.1|1502908_1503901_-|accessory-Sec-system-protein-Asp3
MSTISYIYWDDFSRFSYNFGTKLQFLGKSVCFENPLAPSSTNLYTWSSQTNYQSKRISPNLPLLRKGTRYSLSLNAELDLVGSLFVRIEFYNRFNESVGFELLKKDSIIFIYPKEAYTYTISLINAGCSDFTFHYLKLEEVTDSVIQEKNLSTEFTIEEHQDVLNLLLVEKKDSVYINKIESISQLQQKVELVSNPSLNSDSLILPELEKGLEDALKVFPNIKINVIAYGTQGNFAALYYAKKFSRITAYINDCFAPFGILLKSLPHLTAKQQIFLREVWDTREMSPNVKHYGLVSENSSLNLVSMILSGSEHLPYLTLLKKQDDNYDSL
>NZ_CP008813.1|WP_000571942.1|1519080_1520574_+|helix-turn-helix-domain-containing-protein
MIENFLEKNILNKVKLLTLCYDTPSLSLDTACNRLHLSPVELKNYCHKLNVLFGHKLSIHIQKERILCKLNKLTQEDALKIVYNESNTLQLLKFLIDDSSDKKSLVAFGNDLFLSRSSVYRLRENLIPLIKYLGLSLSKNTIVGDEYRIRYLIAYLTTKFGIKIYDLSALDIKIIRQFLFESGTNIRPTTHLSDIFIFFDTLFILTWKRHHHKVKIPNSKLFSSLKKIFIYEELNTCVKSIVQPYLNVIFNSEDMDYIFLIYLTSANSFAAQKWTETHVDEVLAIFESLPKFQMLLLPLKAALPYSDTYYDELVKVTIYFSRNFIVGLNQLIPETISFPSTFYPGNPKLIPIIEPIVTHWLTEIGESTLKKQHFFLFCAHLERVIKNNMPPIRVVLLTTDFINNQIFKDYLLQSLSLEKINFHSYYLLRDNVSQVSTLKPDLIITDQKLVPYVTKELATNSLVAHIDYNDTPSQISNIQTIISNIKEEKYRKIFDKI
>NZ_CP008813.1|WP_000567071.1|1520671_1522663_-|excinuclease-ABC-subunit-B
MIDRKDTNRFKLVSKYSPSGDQPQAIETLVDNIEGGEKAQILKGATGTGKTYTMSQVIAQVNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGSPKEYADSVVSLRPGQEISRDQLLNNLVDIQFERNDIDFQRGKFRVRGDVVEVFPASRDEHAFRIEFFGDEIDRIREIEALTGRVLGEVEHLAIFPATHFMTNDEHMEEAISKIQAEMENQVELFEKEGKLIEAQRIRQRTEYDIEMLREMGYTNGVENYSRHMDGRSEGEPPFTLLDFFPEDFLIMIDESHMTMGQIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYEMEQTDTVVEQIIRPTGLLDPEVEVRPSMGQMDDLLGEINLRTEKGERTFITTLTKRMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSNGHVIMYADKITDSMQRAMDETARRRRLQMDYNEKHGIVPQTIKKEIRDLIAITKSNDSDKPEKVVDYSSLSKKERQAEIKALQKQMQEAAELLDFELAAQIRDVILKLKAID
>NZ_CP008813.1|WP_047210168.1|1522723_1523521_-|CPBP-family-intramembrane-metalloprotease
MGIVLVSSVLYKFSSYTFFEFINLFNNIYGELGTFSFSAFLLLIWVKFVEKRPFSELGFSTKFKRTLWSLIKGWSIGFILFSISVITAYILGGIDFHSYDVSKATIFYVVTLLPFWLIQSGTEELLTRGWLLPLINHRFHLAVAIGVSSTLFGILHLVNAHVTFLSIVSIICSGVLMSLYMIKSGNIWSVAALHGAWNFSQGNLYGIAVSGQKAGASLLHFTVKENAPDWISGGAFGIEGSLISIFVLLAAIIYLLWLIKTEETD
>NZ_CP008813.1|WP_000681005.1|1523827_1526011_+|ABC-transporter-substrate-binding-protein/permease
MKHKLKAFTLALLSIFFVFGGKVSAETVNIVSDTAYAPFEFKDSDQTYKGIDVDIVNEVAKRAGWNVNMTYPGFDAAVNAVQSGQADALMAGTTVTEARKKVFNFSDTYYDTSVILYTKNNNKVTNYKQLKGKVVGVKNGTAAQSFLEENKSKYGYKVKTFDTSDLMNNSLDSGSIYAAMDDQPVVQFAINQGKAYAINMEGEAVGSFAFAVKKGSGHDNLIKEFNTAFAQMKSDGTYNDIMDKWLGKDATKTSGKATGNANEKATPVKPSYKIVSDSSFAPFEYQNGKGKYTGFDMELIKKIAKQQGFKLDISNPGFDAALNAVQSGQADGVIAGATITEARQKIFDFSDPYYTSSVILAVKKGSNVKSYQDLKGKTVGAKNGTASYTWLSDHADKYNYHVKAFDEASTMYDSMNSGSIDALMDDEAVLAYAINQGRKFETPIKGEKSGDIGFAVKKGANPELIKMFNNGLASLKKSGEYDKLVKKYLSTASTSSNDKAAKPVDESTILGLISNNYKQLLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNTLRTISMIFVDIVRGIPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRLK
>NZ_CP008813.1|WP_069107329.1|1526010_1526751_+|amino-acid-ABC-transporter-ATP-binding-protein
MAELKIDVQDLHKSYGQNEVLKGIDAKFYEGDVVCIIGPSGSGKSTFLRTLNLLESITSGKVVVDGFELSNPKTDIDKARENIGMVFQHFNLFPHMSVLENITFAPIELGKESKEAAEKHGMELLEKVGLADKANAKPDSLSGGQKQRVAIARGLAMNPDILLFDEPTSALDPEMVGDVLNVMKDLAEQGMTMLIVTHEMGFARQVANRVIFTDGGRFLEDGTPEQIFDTPQHPRLQDFLNKVLNV
>NZ_CP008813.1|WP_000656279.1|1526900_1527251_+|hypothetical-protein
MKDYINRILHFIKEHMTYHVNFIDDFLDIKWEKVSNIHLRFWTTIIAYLVIFILSISTVILNLVLLFQGFLTQNPIIYLLFFITLVCAFYFAYKFITYTPTIVKNALQYIKKLKNV
>NZ_CP008813.1|WP_000502594.1|1527343_1527502_-|hypothetical-protein
MGDKPISFRDKDGNFVSAADVWNAEKLEELFNTLNPNRKLRLEREKLAKEKG
>NZ_CP008813.1|WP_069107330.1|1527527_1528841_-|GTPase-ObgE
MSMFLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVNEGLRTLMDFRYNRNFKAKAGEKGMTKGMHGRGAEDLIVSLPPGTTVRDANTGKVITDLVEHDQEFVVARGGRGGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTLLSVVSAAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSASEGRDPYDDYVSINNELETYNLRLMERPQIIVANKMDMPDSEENLAAFKEKLAANYDEFDDMPMIFPISSLAHQGLENLMDATAELLANTEEFLLYDETDMQEDEAYYGFNEDERPFEIRRDDDATWVLYGDKLEKLFVMTNMERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGNFEFEFVD
>NZ_CP008813.1|WP_000863865.1|1528901_1529030_-|DUF4044-domain-containing-protein
MAFGDNGQRKKTGFEKLTLFVVILMVLVTVGGLVFGAISAIM
>NZ_CP008813.1|WP_000244046.1|1529207_1530449_+|aminopeptidase
MVLQDFDNLLKKYAQLIISKGLNVQKGHTLALTIDVEQVHLARLLTEAAYEKGASEVIVDYTDDFITRQRLLHASDEVLTNVPQYTVDKSLALLNKKASRLVVKSSNPNAFATVDPKRLSETTRATAIALEEQSRAIQANKVSWNVAAAAGREWAALVFPELKTSDQQVDALWDTIFKLNRIYEDDPIGAWDAHEAKLLEKATRLNQEQFDALHYTAPGTDLTLGMPKNHIWEAAGSLNAQGETFIANMPTEEIFSAPDYRRANGYVTSTKPLSYAGVIIENMTFTFKDGKIINVTAEKGQETIQRLIEENDGARSLGEVALVPHKTPISLSGLIFFNTLFDENASNHLAIGSAYAFNVEGGTEMTSQELDEAGLNRSSTHVDFMIGSEQMDIDGIRADGTAVPIFRNGEWAI

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Crispr_ID: NZ_CP008813_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008813_3

2012106-2012627

Orphan

Consensus_repeat	Method
CTGGNTTNNCNTCTGGTT	CRT

12 spacers

The CRISPR arrays of NZ_CP008813_3

>merge|NZ_CP008813|3|2012106-2012627|CRT
CTGGTTTGGCTTCTGGTTTAGCCTCTGGCTTAACGTCTGGTTTAACTTCTGGCTTAGCCTCTGGTCTGGCCTCTGGCTTAACGTCTGGTTTAATTTCTGGTTTAGCCTCTGGTTTGGCTTCTGGCTTAGCCTCTGGTTTAACTTCTGGCTTAACGTCTGGCTTAGCTTCTGGCTTAACGTCTGGCTTAACGTCTGGCTTAGCTTCTGGCTTAACGTCCGGTTTGGCTTCTGGCTTAACGTCTGGTTTGGCCTCTGGCTTAACGTCTGGTTTAACTTCTGGCTTAGCCTCTGGCTTAACGTCTGGTTTGGCTTCTGGCTTAACGTCTGGTTTGGCCTCTGGCTTAACGTCTGGTTTAACGTCTGGCTTAGCCTCTGGTTTGGCTTCTGGTTTGGCCTCTGGTTTGGCTTCTGGTTTGGCCTCTGGTTTGGCTTCTGGCTTAGCTTCTGGCTTAACGTCTGGCTTAACATCTGGTTTGGCTTCTGGTTTAACTTCTGGCTTAGCTTCTGGTTTGGCTACTTTTT

>NZ_CP008813|3|3|2012106-2012627|CRT
CTGGTTTGGCTTCTGGTT	TAGCCTCTGGCTTAACGT
CTGGTTTAACTTCTGGCT	TAGCCTCTGGTCTGGCCTCTGGCTTAACGT
CTGGTTTAATTTCTGGTT	TAGCCTCTGGTTTGGCTTCTGGCTTAGCCT
CTGGTTTAACTTCTGGCT	TAACGTCTGGCTTAGCTT
CTGGCTTAACGTCTGGCT	TAACGTCTGGCTTAGCTT
CTGGCTTAACGTCCGGTT	TGGCTTCTGGCTTAACGTCTGGTTTGGCCT
CTGGCTTAACGTCTGGTT	TAACTTCTGGCTTAGCCT
CTGGCTTAACGTCTGGTT	TGGCTTCTGGCTTAACGTCTGGTTTGGCCT
CTGGCTTAACGTCTGGTT	TAACGTCTGGCTTAGCCT
CTGGTTTGGCTTCTGGTT	TGGCCTCTGGTTTGGCTT
CTGGTTTGGCCTCTGGTT	TGGCTTCTGGCTTAGCTTCTGGCTTAACGTCTGGCTTAACAT
CTGGTTTGGCTTCTGGTT	TAACTTCTGGCTTAGCTT
CTGGTTTGGCTACTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008813.1\|WP_017647189.1\|2003845_2005234_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP008813.1\|WP_000459240.1\|2018766_2020407_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226987
NZ_CP008813.1\|WP_088881694.1\|2008902_2010150_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP008813.1\|WP_000764814.1\|2015492_2017814_-\|penicillin-binding-protein	unknown	unknown	gnl\|CDD\|223815
NZ_CP008813.1\|WP_000903269.1\|2005326_2005935_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008813.1\|WP_001125582.1\|2024716_2025454_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP008813.1\|WP_000497678.1\|2015082_2015256_-\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|223762
NZ_CP008813.1\|WP_069107352.1\|1998217_2002930_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173801
NZ_CP008813.1\|WP_000057521.1\|2015291_2015444_-\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|234783
NZ_CP008813.1\|WP_001182060.1\|2023778_2024558_-\|uridine-phosphorylase	unknown	unknown	gnl\|CDD\|350167
NZ_CP008813.1\|WP_000453154.1\|2021854_2022526_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234784
NZ_CP008813.1\|WP_000887149.1\|2011175_2011715_-\|transcription-termination/antitermination-protein-NusG	unknown	unknown	gnl\|CDD\|180161
NZ_CP008813.1\|WP_000010477.1\|2017857_2018742_+\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP008813.1\|WP_001159688.1\|2022555_2023758_-\|NupC/NupG-family-nucleoside-CNT-transporter	unknown	unknown	gnl\|CDD\|224883
NZ_CP008813.1\|WP_000241572.1\|1994292_1996530_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|235367
NZ_CP008813.1\|WP_000145174.1\|2006024_2008526_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NZ_CP008813.1\|WP_000953631.1\|2010192_2011038_-\|patatin-family-protein	unknown	unknown	gnl\|CDD\|132847
NZ_CP008813.1\|WP_000077187.1\|2020576_2021788_-\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP008813.1\|WP_000161343.1\|2003162_2003849_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP008813.1\|WP_000610953.1\|1996899_1997223_-\|AzlD-domain-containing-protein	unknown	unknown	gnl\|CDD\|226827

Protein	Function_ID	Function_description	E-value
NZ_CP008813.1\|WP_017647189.1\|2003845_2005234_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.74133e-46
NZ_CP008813.1\|WP_000459240.1\|2018766_2020407_-\|hypothetical-protein	gnl\|CDD\|226987	COG4640, COG4640, Predicted membrane protein [Function unknown].	3.13723e-08
NZ_CP008813.1\|WP_088881694.1\|2008902_2010150_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.17491e-69
NZ_CP008813.1\|WP_000057521.1\|2015291_2015444_-\|50S-ribosomal-protein-L33	gnl\|CDD\|234783	PRK00504, rpmG, 50S ribosomal protein L33; Validated.	2.53308e-18
NZ_CP008813.1\|WP_001125582.1\|2024716_2025454_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	6.94122e-33
NZ_CP008813.1\|WP_000497678.1\|2015082_2015256_-\|preprotein-translocase-subunit-SecE	gnl\|CDD\|223762	COG0690, SecE, Preprotein translocase subunit SecE [Intracellular trafficking and secretion].	5.81702e-09
NZ_CP008813.1\|WP_069107352.1\|1998217_2002930_+\|S8-family-serine-peptidase	gnl\|CDD\|173801	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases. Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	6.5288e-90
NZ_CP008813.1\|WP_000764814.1\|2015492_2017814_-\|penicillin-binding-protein	gnl\|CDD\|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	0
NZ_CP008813.1\|WP_001182060.1\|2023778_2024558_-\|uridine-phosphorylase	gnl\|CDD\|350167	cd17767, UP_EcUdp-like, uridine phosphorylases similar to Escherichia coli Udp and related phosphorylases. Uridine phosphorylase (UP) is specific for pyrimidines, and is involved in pyrimidine salvage and in the maintenance of uridine homeostasis. In addition to E. coli Udp, this subfamily includes Shewanella oneidensis MR-1 UP and Plasmodium falciparum purine nucleoside phosphorylase (PfPNP). PfPNP is an outlier in terms of genetic distance from the other families of PNPs. PfPNP is catalytically active for inosine and guanosine, and in addition, has a weak UP activity. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	4.65794e-137
NZ_CP008813.1\|WP_000453154.1\|2021854_2022526_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|234784	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional.	3.25832e-110
NZ_CP008813.1\|WP_000887149.1\|2011175_2011715_-\|transcription-termination/antitermination-protein-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	3.00072e-83
NZ_CP008813.1\|WP_000010477.1\|2017857_2018742_+\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.5846e-84
NZ_CP008813.1\|WP_001159688.1\|2022555_2023758_-\|NupC/NupG-family-nucleoside-CNT-transporter	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	3.49248e-155
NZ_CP008813.1\|WP_000241572.1\|1994292_1996530_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	gnl\|CDD\|235367	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional.	0
NZ_CP008813.1\|WP_000145174.1\|2006024_2008526_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_CP008813.1\|WP_000953631.1\|2010192_2011038_-\|patatin-family-protein	gnl\|CDD\|132847	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	5.13221e-122
NZ_CP008813.1\|WP_000077187.1\|2020576_2021788_-\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP008813.1\|WP_000161343.1\|2003162_2003849_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	8.44527e-63
NZ_CP008813.1\|WP_000610953.1\|1996899_1997223_-\|AzlD-domain-containing-protein	gnl\|CDD\|226827	COG4392, COG4392, Predicted membrane protein [Function unknown].	1.54249e-14

>NZ_CP008813.1|WP_000887149.1|2011175_2011715_-|transcription-termination/antitermination-protein-NusG
MLDSFDKGWFVLQTYSGYENKVKENLLQRAQTYNMLDNILRVEIPTQTVNVEKNGKTKEIEENRFPGYVLVEMVMTDEAWFVVRNTPNVTGFVGSHGNRSKPTPLLEEEIRSILISMGQTVDVFDTNIKEGDVVQIIDGAFIGQEGRVVEIENNKVKLMINMFGSETQAELELYQVAEL
>NZ_CP008813.1|WP_000953631.1|2010192_2011038_-|patatin-family-protein
MLSVGLVLEGGGMRGLYTAGVLDAFLDAGIKVDGIVSVSAGALFGVNFVSRQRERALRYNKKYLSHPKYMSLRSWLRTGNFVNKDFTYYEVPMKLDVFDDEAFKKSNIDFYAVATEMTSGKPEYFKIDSVFEQMEILRASSALPVVSKMVDWQGKKYLDGGLSDSIPVDFARGLGFDKLIVVMTRPLNYQKKPSSGRLYKTLYRKYPNFVKTASNRYQQYNNSLEKVMSLEKTGDLFAIRPSKSLVIGRLEKNPDKLDSIYQLGMKDAKSMMPELNSYLMK
>NZ_CP008813.1|WP_088881694.1|2008902_2010150_+|MFS-transporter
MSPLNINKNNWRALIAAIVASGTDDLNIMFLAFSMSTIITDLHLSAAQAGWIGTITNLGMLVGGLIFGLLADRYNKFKVFKWTILIFSIATGLVFFTTNLSYLYIMRFIAGIGVGGEYGIAIAIMAGIVPANKMGRISSLNGIAGQVGSISSALLAGWLAPALGWRGLFLFGLLPIVLVLWMQFAIDDKDILDQYNTDADDEPLDISIKALFDTPVLATQSLALMVMTTVQIAGYFGMMNWLPTIIQTNLNVSIKNSSLWMIATILGMCLGMLVFGQLLDKFGPRLVYGCFLLSSAICVYLFQFATTMPSMIIGGAIVGFFVNGMFAGYGAMITRLYPHHIRSTANNLILNVGRAIGGFSSVIIGMILDVSNVSMVILFLASLYIVSFLSMLSIKQLKRQKYHTNLTQLDVKPTD
>NZ_CP008813.1|WP_000145174.1|2006024_2008526_-|leucine--tRNA-ligase
MTFYNHKEIEPKWQAFWADNHTFKTGTDASKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWMLKITAYAERLLEDLEEVDWPESIKDMQRNWIGKSTGANVTFKVKDTDKDFTVFTTRPDTLFGATYAVLAPEHALVDAITTADQAEAVAEYKRQASLKSDLARTDLAKEKTGVWTGAYAINPVNGKEIPVWIADYVLASYGTGAIMAVPAHDERDWEFAKQFKLDIIPVLEGGNVEEAAFTEDGLHINSDFLDGLDKASAIAKMVEWLEAEGVGNEKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSTAVPESELPLVLPVTKDIRPSGTGESPLANLTDWLEVTREDGVKGRRETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQAPAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFLDRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLMVFVNAANKEDKLFSDYAKGFVQLIAPFAPHLGEELWQVLTASGESISYVPWPSYDESKLVENEIEIVVQIKGKVKAKLVVAKDLSREELQDLALANEKVQAEIAGKDIIKVIAVPNKLVNIVVK
>NZ_CP008813.1|WP_000903269.1|2005326_2005935_+|hypothetical-protein
MLHSKKIHSLSLIAVLSLATYTSLQPNHVTAEQSQKTSTVHMSQKTIEHKLKVADKEAAPLYAKIDHIQRHIEVKKAKDLKVIELYINKDINQLEKQNKRLLTKFYTSIDNQTWDSTSEVKKLIDKTNLSTNEKNRLKLYFEQRAYLETRLNDRYQKFDNSIENQNKELKILTSKIEKIYQKHGITKEVLKTYYAKKTVRAD
>NZ_CP008813.1|WP_017647189.1|2003845_2005234_+|HAMP-domain-containing-histidine-kinase
MKKKSLISNLILINSITLFLGFYLIYFSVNYVIKDYVHQMTRNSMQANFTILDSIYNNKKIPDENMVNQDSIFVWSYYAIFDQHYRMKYGTDNHKKESHDIIRYLTQKRLWQISKEKDGMFVTIKKKTYYVMSKDYSGILVDGSIKKVPKAQSQLFHVINFSDITYTQHLITKINHFLIVILVLTYIPMLFIMRKTFTGIRESIQSVQTYISSLWKNQGNHQSSQKEIVFSDFDPLLLESQEMANRIYQAEESQRNFFQNASHELRTPLMSIQGYTEGVQEGIIDAELAHSVILQESKKMKQLVDDIILLSKLDSNLSDQKDEFSLNELLNSIIAYFKPLANKQKISITYRPDEHEKLLKGNEELIQRAINNILSNALRYAVSHIEISYTNQKLTISNDGPAISKEDLPYIFDRFYKGHGGQTGIGLAMTKEIIKQHHGNIIAESDSTSTTFTIYFNCHKIA
>NZ_CP008813.1|WP_000161343.1|2003162_2003849_+|response-regulator-transcription-factor
MTKIIYFADDEKNIRDLVVPFLEHDGFTVRAFETGDLLLEAYKNQKPDLVILDIMMPGTNGLDVMKSIRQYDNVPIIMLTARDSDVDFITAFNLGTDDYFTKPFSPIKLSLHVKALFKRLDEKAIKNDTQYQFLDLTLDTEKRIALLSNEEMPLTKTEFDFLLVLIEKPETAFSRETLLNRIWGFDDIESRAVDDTIKRLRKKFKQYHSQVSIKTVWGYGFKLIKEDK
>NZ_CP008813.1|WP_069107352.1|1998217_2002930_+|S8-family-serine-peptidase
MNTKQRFSIRKYKLGAVSVLLGTLFFLGGITNVAADSVINKPSDIAVEQQVKDSPTSIANETPTNNTSSALASTAQDNLVTKANNSPTETQPVAESHSQATETFSPAANQPVESTQEVSKTPLTKQNLAVKPTPAISKETPQNIDSNKIITVPKVWNTGYKGEGTVVAIIDSGLDINHDALQLNDSTKAKYQNEQQMNAAKAKAGINYGKWYNNKVIFGHNYVDVNTELKEVKSTSHGMHVTSIATANPSKKDTNELIYGVAPEAQVMFMRVFSDEKRGTGPALYVKAIEDAVKLGADSINLSLGGANGSLVNADDRLIKALEMARLAGVSVVIAAGNDGTFGSGASKPSALYPDYGLVGSPSTAREAISVASYNNTTLVNKVFNIIGLENNKNLNNGLAAYADPKVSDKTFEVGKQYDYVFVGKGNDNDYKDKTLNGKIALIERGDITFTKKVVNAINHGAVGAIIFNNKAGEANLTMSLDPEASAIPAIFTQKEFGDVLAKNNYKIVFNNIKNKQANPNAGVLSDFSSWGLTADGQLKPDLSAPGGSIYAAINDNEYDMMSGTSMASPHVTGATALVKQYLLKEHPELKKGDIERTVKYLLMSTAKAHLNKDTGAYTSPRQQGAGIIDVAAAVQTGLYLTGGENNYGSVTLGNIKDKISFDVTVHNINKVAKDLHYTTYLNTDQVKDGFVTLAPQQLGTFTGKTIRIEPGQTQTITIDIDVSKYHDMLKKVMPNGYFLEGYVRFTDPVDGGEVLSIPYVGFKGEFQNLEVLEKSIYKLVANKEKGFYFQPKQTNEVPGSEDYTALMTTSSEPIYSTDGTSPIQLKALGSYKSIDGKWILQLDQKGQPHLAISPNDDQNQDAVAVKGVFLRNFNNLRAKVYRADDVNLQKPLWVSAPQEGDKNYYSGNTENPKSTFLYDTEWKGTTTDGIPLEDGKYKYVLTYYSDVPGSKPQQMVFDITLDRQAPTLTTATYDKDRRIFKARPAVEHGESGIFREQVFYLKKDKDGHYNSVLRQKGEDGILVEDNKVFIKQEKDGSFILPKEVNDFSHVYYTVEDYAGNLVSAKLEDLINIGNKNGLVNVKVFSPELNSNVDIDFSYSVKDDKGNVIKKQHHGKDLNLLKLPFGTYTFDLFLYDEERANLISPKSVTVTISEKDSLKDVLFKVNLLKKAALLVEFDKLLPKGATVQLVTKTNTVVDLPKATYSPTDYGKNIPVGDYRLNVTLPSGYSTLENLDDLLVSVKEGQVNLTKLTLINKAPLINALAEQTDIITQPVFYNAGTHLKNNYLANLEKAQTLIKNKVEQTSIDNAIAALRESRQALNGKETDTSLLAKAILAETEIKGNYQFVNASPLSQSTYINQVQLAKNLLQKPNVTQSEVDKALENLDIAKNQLNGHETDYSGLHHMIIKANVLKQTSSKYQNASQFAKENYNNLIKKAELLLSNRQATQAQVEELLNQIKATEQELDGRDRVSSAENYSQSLNDNDSLNTTPINPPNQPQALIFKKGMTKESEVAQKRVLGVTSQTDNQKVKTNKLPKTGESTPKITYTILLFSLSMLGLATIKLKSIKRE
>NZ_CP008813.1|WP_000610953.1|1996899_1997223_-|AzlD-domain-containing-protein
MINSTVFLAILLGFVVSWVPRVAPFIFVKYKGLPNSLVKFLKFLPLSILFALTFSSFFSVKLGQLPTLKWLDLLAGIPTLVVTIRYRNLFYTVLTGIVTMALLRLLF
>NZ_CP008813.1|WP_000241572.1|1994292_1996530_-|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase
MVKVSNLGYPRLGEQREWKQAIEAFWAGNLEQKDLEKQLKQLRINHLKKQKETGIDLIPVGDFSCYDHVLDLSFQFNIIPKRFDEYERNLDLYFAIARGDKDNVASSMKKWFNTNYHYIVPEWEVETKPHLQNNYLLDLYLEAREVVGDKAKPVITGPITYVSLSSGIVDFEATVQRLLPLYKQVFQDLIDAGATYIQIDEPIFVTDEGELLVDIAKSVYDFFAREVPQAHFIFQTYFESAVCLDKLSKLPVTGFGLDFIHGRAENLAAVKQGLFREKELFAGIVNGRNIWAVNLEETLALLEEIGPFVKRLTLQPSSSLLHVPVTTKYETHLDPVLKNGLSFADEKLKELELLASALDGNKTKGYHEALSRFSALQAADFRHVALESLAEVRLERSPYKLRQALQAEKLQLPILPTTTIGSFPQSPEIRKKRLAWKRGNLSDSDYKDFIKTEIRRWIAIQEDLDLDVLVHGEFERVDMVEFFGQKLAGFTTTKLGWVQSYGSRAVKPPIIYGDVKHIQPLSLEETVYAQSLTKKPVKGMLTGPITITNWSFERDDISRSDLFNQIALAIKDEIQLLEQSGIAIIQVDEAALREGLPLRQQKQQAYLDDAVAAFKIATSSVKDETQIHTHMCYSKFDEIIDSIRALDADVISIETSRSHGDIIESFETAVYPLGIGLGVYDIHSPRIPTKEEIIVNIQRSLKCLSKEQFWVNPDCGLKTRREAETIAALEVLVSATKEVRQQLDN
>NZ_CP008813.1|WP_000497678.1|2015082_2015256_-|preprotein-translocase-subunit-SecE
MFVKGIFQVLRDTTWPNRKQRWKDFISILEYTVFFTIVIYIFDKLLAAGVMDLINRF
>NZ_CP008813.1|WP_000057521.1|2015291_2015444_-|50S-ribosomal-protein-L33
MAQKKASLACTECGSRNYSIGVSSTPKPTRLEVNKFCKYCKKYTIHKETR
>NZ_CP008813.1|WP_000764814.1|2015492_2017814_-|penicillin-binding-protein
MKLFDKFIDLFRVDEDNDEMTRKNEQETREETSNLDGEEVYDIDDITRPSKSQYQRGIRHQKKNAKSRPEWLQKVDRYLPSPKNPIRRFWRRYRIGKLLFIALMAFILIFGSYLFYLSKTATVSDLQSALKTTTTIYDKNKEYAGKLSGQKGTYVELNAISDHLKNAVIATEDRTFYENNGVNFKRFFLAVATLGKFGGGSTITQQLAKNAYLSQDQTIKRKAREFFLALELTKKYSKAEILTMYLNNSYFGNGVWGVEDASRKYFGTSAANLTVDEAATLAGMLKGPEVYNPYYSVENATNRRDTVLAAMVDAGKLTKSQAKEAASIGMKNRLADTYAGKINDYRYPSYFDAVVNEAIDTYGISEKDIVNNGYKIYTALDQNYQSGMQKTFDDTSLFPVSDYDGQSAQGASVALDPKTGGVRGLVGRVQSTKDAQFRSFNYATQSKRSPASTIKPLVVYSPAIASGWSIDKELPNKVQDFHGYKPSNYGGIETESIPMYQALANSYNIPAVYTLDKLGINKAFTYGRKFGLNMSSANKELGVALGGSVTTNPLEMAQAYSTFANDGIMHRAHLITRIETANGKLVKQFTDKPKRVISRSVASKMTSMMLGTFSNGTAINANVYGYTMAGKTGTTETDFNPNLSGDQWVVGYTPDVVISQWVGFKNTDKHHYLTDSSAGTASNIFSTQASYILPYTKGSSFTHIENAYFQNGIGSVYNAQDASNTTNQESRSIINDLKDSASKAAQDISRAVEDSNFQEKVKDAWNSLKDYFR
>NZ_CP008813.1|WP_000010477.1|2017857_2018742_+|RluA-family-pseudouridine-synthase
MSFSLKIRNPYGEHTVKELLEDYFLIPRKIRHFLRVKKHVLINNEFINWQTVVQENDTITLIFDDEDYPTKKIPLGRAELIDCLYEDEHLIIVNKPEGMKTHGNQPNEIALLNHVSAYSGQTCYVVHRLDMETSGAVLFAKNPFILPLINQRLERKEIWREYWALVEGKFSPKHQVLRDKIGRNRHDRRKRIIDSKNGQHAMTIIDVLKYTQNSSLIKCRLETGRTHQIRIHLSHHGHPLIGDPLYNPSSNNERLMLHAHRLTLSHPLTCETISVEAPSSTFEKILNNYKKGVG
>NZ_CP008813.1|WP_000459240.1|2018766_2020407_-|hypothetical-protein
MFDFFKKKVVKVCLVIFGIVLVSLLSLGFFYFSKGQVLSRFVAARSRTSGQAFDNIKEYMVWSDTGESITNDEANYANFEPLSKSEARKLGQEIKEGNKNDSMYLKRVGSRLGIFPDYRIANKPMSLTLKTNVPKLDVLLNQKKVATSNSDHFSVTVERLPRTHYTASLEGTSDGKEIKLKKDYDGKNQTIDLSVAFKSFTVTSNLMDGNLYFGDNRIAKLKDGSYSVENYPVTDGSKAYIKKVFNDGEITSHKQKLISIADNQTIKLDVDGLLNEKEAGQKLITAFNQLILYVSTGQDPQTLGTVFEKGAENDFYKGLKESIKAKFVTDNRKASHFTIPNIVLNKMTQVGKESYQVNFAADYDFNYDKSTDPDKKTYGHIIQNLTGNFIMKKSGNSYLISNDGKKDITVAKETNKVKADPVSIFPENLVGSWKGEVEDGTVTMTFDKDGKVTQKKVYKDSKSKESNHSAKVTKLEDKGNGLYLYQYESGTDTTTFVTGGIGGLKVKYAYGIKIEGNKIIPVIWQTSSDGEFDYHKPLLSKPLTKQ
>NZ_CP008813.1|WP_000077187.1|2020576_2021788_-|phosphopentomutase
MSQFDRIHLVVLDSVGIGAAPDANDFVNAGVPDGASDTLGHISKTVGLAVPNMAKIGLGNIPRPQALKTVPAEENPSGYATKLQEVSLGKDTMTGHWEIMGLNITEPFDTFWNGFPEDIITKIEDFSGRKVIREANKPYSGTAVIDDFGPRQMETGELIIYTSADPVLQIAAHEDIIPLEELYRICEYARSITMERPALLGRIIARPYVGEPGNFTRTANRHDYAVSPFEDTVLNKLDQAGIDTYAVGKINDIFNGSGINHDMGHNKSNSHGIDTLIKTMGLSEFEKGFSFTNLVDFDALYGHRRDPHGYRDCLHEFDERLPEIISAMRDKDLLLITADHGNDPTYAGTDHTREYIPLLAYSPSFTGNGLIPVGHFADISATVADNFGVDTAMIGESFLQDLV
>NZ_CP008813.1|WP_000453154.1|2021854_2022526_-|deoxyribose-phosphate-aldolase
MEVKDILKTVDHTLLATTATWPEIQTILDDAMAYETASACIPASYVKKAAEYVSGKLAICTVIGFPNGYSTTAAKVFECQDAIKNGADEIDMVINLTDVKNGDFDTVEEEIRQIKAACQDHILKVIVETCQLTKEELIELCGVVTRSGADFIKTSTGFSTAGATFEDVEVMAKYVGEGVKIKAAGGISSLEDAEKFIALGASRLGTSRIIKIVKNQKVEEGTY
>NZ_CP008813.1|WP_001159688.1|2022555_2023758_-|NupC/NupG-family-nucleoside-CNT-transporter
MQFIYSIIGILLVLGIVYAISFNRKSVSLSLIGKALIVQFIIALILVRIPLGQQVVSVVSTGVTKVINCGQAGLNFVFGSLADSGAKTGFIFAIQTLGNIVFLSALVSLLYYVGILGFVVKWIGKGVGKIMKSSEVESFVAVANMFLGQTDSPILVSKYLGRMTDSEIMVVLVSGMGSMSVSILGGYIALGIPMEYLLIASTMVPIGSILIAKILLPQTEPVQKIDDIKMDNKGNNANVIDAIAEGASTGAQMAFSIGASLIAFVGLVSLINMMLSGLGIRLEQIFSYVFAPFGFLMGFDHKNILLEGNLLGSKLILNEFVSFQQLGHLIKSLDYRTALVATISLCGFANLSSLGICVSGIAVLCPEKRGTLARLVFRAMIGGIAVSMLSAFIVGIVTLF
>NZ_CP008813.1|WP_001182060.1|2023778_2024558_-|uridine-phosphorylase
MQNYSGEVGLQYHLQIRPGDVGRYVIMPGDPKRCAKIAEHFDNAVLVADSREYVTYTGTLNGEKVSVTSTGIGGPSASIAMEELKLCGADTFIRVGTCGGIDLDVKGGDIVIATGAIRMEGTSKEYAPIEFPAVADLEVTNALVNAAKKLGYTSHAGVVQCKDAFYGQHEPERMPVSYELLNKWEAWKRLGTKASEMESAALFVAASHLGVRCGSDFLVVGNQERNALGMDNPMAHDTEAAIQVAVEALRTLIENDKSQ
>NZ_CP008813.1|WP_001125582.1|2024716_2025454_+|GntR-family-transcriptional-regulator
MPKNELNNKLNKLKHVQVYNKIFNMIQDGTYSPGMQLPSEPELAGQLNVSRATLRKSLALLQEDHLVKNIRGKGNFIRENSSNLSENGYENRQHPIKTCLTSKITEVELEFRVEVPAEAITASLKQETPVVVIADRWYHTDDGPLAYTLSFIPIELISDAEISLHDTKQLLNFIEEGIYQEGISSHSQSHLGYATSGNFSATKYTLSDHGQFILIQETIFNQEKILMCNKHYVPIEHFELSITSH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP008813_3	3.10\|2012496\|18\|NZ_CP008813\|CRT	2012496-2012513	18	NZ_CP008813.1	2013258-2013275	0	1.0
NZ_CP008813_3	3.12\|2012592\|18\|NZ_CP008813\|CRT	2012592-2012609	18	NZ_CP008813.1	2012943-2012960	0	1.0
NZ_CP008813_3	3.1\|2012124\|18\|NZ_CP008813\|CRT	2012124-2012141	18	NZ_CP008813.1	2012919-2012936	1	0.944
NZ_CP008813_3	3.4\|2012256\|18\|NZ_CP008813\|CRT	2012256-2012273	18	NZ_CP008813.1	2012943-2012960	1	0.944
NZ_CP008813_3	3.5\|2012292\|18\|NZ_CP008813\|CRT	2012292-2012309	18	NZ_CP008813.1	2012943-2012960	1	0.944
NZ_CP008813_3	3.4\|2012256\|18\|NZ_CP008813\|CRT	2012256-2012273	18	NZ_CP008813.1	2012931-2012948	2	0.889
NZ_CP008813_3	3.5\|2012292\|18\|NZ_CP008813\|CRT	2012292-2012309	18	NZ_CP008813.1	2012931-2012948	2	0.889
NZ_CP008813_3	3.7\|2012376\|18\|NZ_CP008813\|CRT	2012376-2012393	18	NZ_CP008813.1	1695088-1695105	2	0.889

1. spacer 3.10|2012496|18|NZ_CP008813|CRT matches to position: 2013258-2013275, mismatch: 0, identity: 1.0

tggcctctggtttggctt	CRISPR spacer
tggcctctggtttggctt	Protospacer
******************

2. spacer 3.12|2012592|18|NZ_CP008813|CRT matches to position: 2012943-2012960, mismatch: 0, identity: 1.0

taacttctggcttagctt	CRISPR spacer
taacttctggcttagctt	Protospacer
******************

3. spacer 3.1|2012124|18|NZ_CP008813|CRT matches to position: 2012919-2012936, mismatch: 1, identity: 0.944

tagcctctggcttaacgt	CRISPR spacer
tagcttctggcttaacgt	Protospacer
****.*************

4. spacer 3.4|2012256|18|NZ_CP008813|CRT matches to position: 2012943-2012960, mismatch: 1, identity: 0.944

taacgtctggcttagctt	CRISPR spacer
taacttctggcttagctt	Protospacer
**** *************

5. spacer 3.5|2012292|18|NZ_CP008813|CRT matches to position: 2012943-2012960, mismatch: 1, identity: 0.944

taacgtctggcttagctt	CRISPR spacer
taacttctggcttagctt	Protospacer
**** *************

6. spacer 3.4|2012256|18|NZ_CP008813|CRT matches to position: 2012931-2012948, mismatch: 2, identity: 0.889

taacgtctggcttagctt	CRISPR spacer
taacgtctggtttaactt	Protospacer
**********.***.***

7. spacer 3.5|2012292|18|NZ_CP008813|CRT matches to position: 2012931-2012948, mismatch: 2, identity: 0.889

taacgtctggcttagctt	CRISPR spacer
taacgtctggtttaactt	Protospacer
**********.***.***

8. spacer 3.7|2012376|18|NZ_CP008813|CRT matches to position: 1695088-1695105, mismatch: 2, identity: 0.889

taacttctggcttagcct	CRISPR spacer
taatttctggctttgcct	Protospacer
***.********* ****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP008813_1	1.1\|936773\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936773-936802	30	MK448971	Streptococcus phage Javan52, complete genome	2513-2542	0	1.0
NZ_CP008813_1	1.2\|936839\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936839-936868	30	MK448971	Streptococcus phage Javan52, complete genome	2513-2542	0	1.0
NZ_CP008813_1	1.4\|936971\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936971-937000	30	MK448690	Streptococcus phage Javan169, complete genome	18379-18408	0	1.0
NZ_CP008813_1	1.5\|937037\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	937037-937066	30	MK448971	Streptococcus phage Javan52, complete genome	2513-2542	0	1.0
NZ_CP008813_1	1.6\|937103\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	937103-937132	30	MK448971	Streptococcus phage Javan52, complete genome	2513-2542	0	1.0
NZ_CP008813_1	1.7\|937169\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937169-937198	30	MK448790	Streptococcus phage Javan515, complete genome	1846-1875	0	1.0
NZ_CP008813_1	1.7\|937169\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937169-937198	30	MK448957	Streptococcus phage Javan484, complete genome	1842-1871	0	1.0
NZ_CP008813_1	1.8\|937235\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937235-937264	30	MK448334	Streptococcus satellite phage Javan147, complete genome	3211-3240	5	0.833
NZ_CP008813_1	1.8\|937235\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937235-937264	30	MK448337	Streptococcus satellite phage Javan152, complete genome	3210-3239	5	0.833
NZ_CP008813_1	1.14\|937631\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937631-937660	30	KU878088	Bacillus phage AR9, complete genome	204172-204201	5	0.833
NZ_CP008813_1	1.14\|937631\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937631-937660	30	MF360957	Bacillus virus PBS1, complete genome	114434-114463	5	0.833
NZ_CP008813_1	1.1\|936773\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936773-936802	30	MK448518	Streptococcus satellite phage Javan50, complete genome	3738-3767	6	0.8
NZ_CP008813_1	1.2\|936839\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936839-936868	30	MK448518	Streptococcus satellite phage Javan50, complete genome	3738-3767	6	0.8
NZ_CP008813_1	1.3\|936905\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936905-936934	30	MH853356	Streptococcus phage LF2, partial genome	44683-44712	6	0.8
NZ_CP008813_1	1.3\|936905\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936905-936934	30	MK448749	Streptococcus phage Javan39, complete genome	18116-18145	6	0.8
NZ_CP008813_1	1.3\|936905\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936905-936934	30	MK448690	Streptococcus phage Javan169, complete genome	18689-18718	6	0.8
NZ_CP008813_1	1.3\|936905\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936905-936934	30	MK448995	Streptococcus phage Javan626, complete genome	18430-18459	6	0.8
NZ_CP008813_1	1.4\|936971\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936971-937000	30	MK448749	Streptococcus phage Javan39, complete genome	17807-17836	6	0.8
NZ_CP008813_1	1.4\|936971\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936971-937000	30	MK448740	Streptococcus phage Javan367, complete genome	18446-18475	6	0.8
NZ_CP008813_1	1.5\|937037\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	937037-937066	30	MK448518	Streptococcus satellite phage Javan50, complete genome	3738-3767	6	0.8
NZ_CP008813_1	1.6\|937103\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	937103-937132	30	MK448518	Streptococcus satellite phage Javan50, complete genome	3738-3767	6	0.8
NZ_CP008813_1	1.10\|937367\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937367-937396	30	NZ_CP015354	Bacillus thuringiensis strain MYBT18246 plasmid p120416, complete sequence	27570-27599	6	0.8
NZ_CP008813_1	1.12\|937499\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937499-937528	30	NZ_CP019583	Lactobacillus helveticus strain LH5 plasmid pCBTLH5_2, complete sequence	2104-2133	6	0.8
NZ_CP008813_1	1.12\|937499\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937499-937528	30	NZ_AP018406	Lactobacillus plantarum strain SN35N plasmid pSN35N-1, complete sequence	11383-11412	6	0.8
NZ_CP008813_1	1.12\|937499\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937499-937528	30	NC_014386	Lactobacillus helveticus R0052 plasmid pIR52-1, complete sequence	4282-4311	6	0.8
NZ_CP008813_1	1.13\|937565\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937565-937594	30	MN855659	Bacteriophage sp. isolate 142, complete genome	4618-4647	6	0.8
NZ_CP008813_1	1.13\|937565\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937565-937594	30	JQ309827	Enterococcus phage vB_Efae230P-4, complete genome	13012-13041	6	0.8
NZ_CP008813_1	1.13\|937565\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937565-937594	30	NC_049932	Enterococcus phage vB_EfaP_Ef6.2, complete genome	5162-5191	6	0.8
NZ_CP008813_1	1.13\|937565\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937565-937594	30	NC_049933	Enterococcus phage vB_EfaP_Ef6.3, complete genome	5027-5056	6	0.8
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP038792	Escherichia coli strain PF9285 plasmid pDW54_1, complete sequence	60939-60967	6	0.793
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_LR792629	Klebsiella pneumoniae isolate SB5881 plasmid SB5881_II	43303-43331	6	0.793
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_FO834905	Klebsiella pneumoniae strain Kp52.145 plasmid II, complete sequence	95963-95991	6	0.793
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NC_019254	Shigella sp. MO17 plasmid pMO17_54, complete sequence	30786-30814	6	0.793
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	MH622943	Myoviridae sp. isolate ctbc_4, complete genome	209711-209739	6	0.793
NZ_CP008813_1	1.16\|937762\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937762-937791	30	MK580972	Stenotrophomonas phage YB07, complete genome	157678-157707	6	0.8
NZ_CP008813_2	2.7\|1516254\|30\|NZ_CP008813\|CRT	1516254-1516283	30	NC_019418	Streptococcus phage phiNJ2, complete genome	30961-30990	6	0.8
NZ_CP008813_2	2.9\|1516338\|30\|NZ_CP008813\|CRT	1516338-1516367	30	NC_019418	Streptococcus phage phiNJ2, complete genome	30961-30990	6	0.8
NZ_CP008813_3	3.2\|2012160\|30\|NZ_CP008813\|CRT	2012160-2012189	30	NC_042040	Rhodococcus phage Trina, complete genome	41191-41220	6	0.8
NZ_CP008813_1	1.4\|936971\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936971-937000	30	MK448917	Streptococcus phage Javan362, complete genome	17602-17631	7	0.767
NZ_CP008813_1	1.7\|937169\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937169-937198	30	NZ_CP027861	Ahniella affigens strain D13 plasmid unnamed, complete sequence	72803-72832	7	0.767
NZ_CP008813_1	1.10\|937367\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937367-937396	30	NZ_CP047434	Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6	28078-28107	7	0.767
NZ_CP008813_1	1.10\|937367\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937367-937396	30	NZ_CP046372	Spiroplasma citri strain LB 319 plasmid pScpLB319-1, complete sequence	26344-26373	7	0.767
NZ_CP008813_1	1.10\|937367\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937367-937396	30	NZ_CP047440	Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-3, complete sequence	48040-48069	7	0.767
NZ_CP008813_1	1.13\|937565\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937565-937594	30	MW149109	Microvirus sp. isolate gila12, complete genome	4811-4840	7	0.767
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	AP022644	Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence	7614-7642	7	0.759
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP044263	Campylobacter armoricus strain CA639 plasmid pCA639-2, complete sequence	12647-12675	7	0.759
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP009650	Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence	6938-6966	7	0.759
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	CP016196	Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-2, complete sequence	81747-81775	7	0.759
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NC_019507	Campylobacter phage CP21, complete genome	109792-109820	7	0.759
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	MT932329	Campylobacter phage F379, complete genome	172646-172674	7	0.759
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	MN693878	Marine virus AFVG_250M440, complete genome	6485-6513	7	0.759
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	HE815464	Campylobacter phage CP21 complete sequence	109792-109820	7	0.759
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	FN667788	Campylobacter phage CP220, complete genome	15618-15646	7	0.759
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP053732	Escherichia coli strain CP55_Sichuan plasmid pCP55-IncFIB, complete sequence	51757-51785	7	0.759
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	220505-220533	7	0.759
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	CP043759	Escherichia coli strain CVM N55972 plasmid pN55972-1, complete sequence	49144-49172	7	0.759
NZ_CP008813_1	1.16\|937762\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937762-937791	30	MN095772	Stenotrophomonas phage Moby, complete genome	147461-147490	7	0.767
NZ_CP008813_1	1.17\|937828\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937828-937857	30	MT375042	Acinetobacter phage vB_AbaP_Alexa, complete genome	22918-22947	7	0.767
NZ_CP008813_3	3.3\|2012208\|30\|NZ_CP008813\|CRT	2012208-2012237	30	MH616814	Microviridae sp. isolate ctjj954, complete genome	2233-2262	7	0.767
NZ_CP008813_1	1.4\|936971\|30\|NZ_CP008813\|CRISPRCasFinder,CRT	936971-937000	30	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	104413-104442	8	0.733
NZ_CP008813_1	1.9\|937301\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937301-937330	30	LT960608	Bacillus phage SBSphiJ genome assembly, complete genome: monopartite	125352-125381	8	0.733
NZ_CP008813_1	1.10\|937367\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937367-937396	30	KY653128	Staphylococcus phage IME1364_01, complete genome	2960-2989	8	0.733
NZ_CP008813_1	1.10\|937367\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937367-937396	30	MF417959	Uncultured Caudovirales phage clone 2F_5, partial genome	6398-6427	8	0.733
NZ_CP008813_1	1.10\|937367\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937367-937396	30	NC_015386	Treponema succinifaciens DSM 2489 plasmid pTRESU01, complete sequence	36961-36990	8	0.733
NZ_CP008813_1	1.10\|937367\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937367-937396	30	HQ632860	Vibrio phage jenny 12G5 genomic sequence	37630-37659	8	0.733
NZ_CP008813_1	1.14\|937631\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937631-937660	30	MK017819	Clostridium phage CPD4, complete genome	18746-18775	8	0.733
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_KX686749	Campylobacter coli strain Tx40 plasmid unnamed, complete sequence	36389-36417	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	KM659092	Ochrobactrum sp. LM19 plasmid pLM19O2, complete sequence	16917-16945	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP007180	Campylobacter coli RM5611 plasmid pRM5611_48kb, complete sequence	40644-40672	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP017869	Campylobacter coli strain MG1116 plasmid pCCDM116L, complete sequence	40167-40195	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP044166	Campylobacter coli strain AR-0416 plasmid pAR-0416	164121-164149	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP023544	Campylobacter jejuni strain CFSAN032806 plasmid pCFSAN032806, complete sequence	38773-38801	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	CP002030	Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet, complete sequence	38834-38862	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP017419	Campylobacter jejuni strain MTVDSCj16 plasmid pMTVDSCj16-1, complete sequence	32976-33004	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP017866	Campylobacter coli strain YF2105 plasmid pCCDM105L, complete sequence	17803-17831	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP017879	Campylobacter coli strain BG2108 plasmid pCCDM108L, complete sequence	27253-27281	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP017416	Campylobacter jejuni strain MTVDSCj07 plasmid pMTVDSCj07-1, complete sequence	33560-33588	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP017872	Campylobacter coli strain BP3183 plasmid pCCDM183, complete sequence	26879-26907	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP020775	Campylobacter jejuni strain YH002 plasmid pCJP002, complete sequence	41363-41391	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NC_022355	Campylobacter coli CVM N29710 plasmid pN29710-1, complete sequence	38739-38767	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP031069	Bacillus sp. JAS24-2 plasmid pl626, complete sequence	443809-443837	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP045793	Campylobacter coli strain CFSAN032805 plasmid p1CFSAN032805, complete sequence	36969-36997	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NC_017282	Campylobacter jejuni subsp. jejuni S3 plasmid pTet, complete sequence	13146-13174	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	CP047483	Campylobacter jejuni strain CFSAN096297 plasmid CFSAN096297, complete sequence	25720-25748	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP023546	Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_1, complete sequence	37540-37568	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP017026	Campylobacter coli plasmid pCC14983A-1, complete sequence	106554-106582	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP017877	Campylobacter coli strain ZV1224 plasmid pCCDM224L, complete sequence	22300-22328	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_CP017861	Campylobacter jejuni strain TS1218 plasmid pCJDM218, complete sequence	34264-34292	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_MK541988	Campylobacter coli strain CVM N61740F plasmid pN61740F, complete sequence	37575-37603	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NZ_MK541989	Campylobacter coli strain CVM N61925F plasmid pN61925F, complete sequence	13311-13339	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	NC_022354	Campylobacter jejuni subsp. jejuni 00-2544 plasmid unnamed, complete sequence	14941-14969	8	0.724
NZ_CP008813_1	1.15\|937697\|29\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937697-937725	29	AP014085	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C2A-MedDCM-OCT-S36-C93, * SEQUENCING IN PROGRESS *	4039-4067	8	0.724
NZ_CP008813_2	2.7\|1516254\|30\|NZ_CP008813\|CRT	1516254-1516283	30	CP053410	Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence	90711-90740	8	0.733
NZ_CP008813_2	2.9\|1516338\|30\|NZ_CP008813\|CRT	1516338-1516367	30	CP053410	Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence	90711-90740	8	0.733
NZ_CP008813_3	3.3\|2012208\|30\|NZ_CP008813\|CRT	2012208-2012237	30	NC_028835	Lactobacillus phage CL2, complete genome	3496-3525	8	0.733
NZ_CP008813_3	3.3\|2012208\|30\|NZ_CP008813\|CRT	2012208-2012237	30	KR905066	Lactobacillus phage CL1, complete genome	2481-2510	8	0.733
NZ_CP008813_3	3.3\|2012208\|30\|NZ_CP008813\|CRT	2012208-2012237	30	NC_028911	Lactobacillus phage iLp1308, complete genome	2577-2606	8	0.733
NZ_CP008813_1	1.14\|937631\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937631-937660	30	MN417334	Clostridium phage CPAS-15, complete genome	42722-42751	9	0.7
NZ_CP008813_1	1.14\|937631\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937631-937660	30	KY206887	Clostridium phage Clo-PEP-1, complete genome	29290-29319	9	0.7
NZ_CP008813_1	1.14\|937631\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937631-937660	30	MF001357	Clostridium phage CP3, partial genome	20390-20419	9	0.7
NZ_CP008813_1	1.16\|937762\|30\|NZ_CP008813\|CRISPRCasFinder,CRT,PILER-CR	937762-937791	30	MN693441	Marine virus AFVG_25M481, complete genome	6991-7020	9	0.7
NZ_CP008813_3	3.3\|2012208\|30\|NZ_CP008813\|CRT	2012208-2012237	30	KR905069	Lactobacillus phage iLp84, complete genome	2562-2591	9	0.7
NZ_CP008813_3	3.3\|2012208\|30\|NZ_CP008813\|CRT	2012208-2012237	30	KU848186	Lactobacillus phage PLE3, complete genome	2532-2561	9	0.7

1. spacer 1.1|936773|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 0, identity: 1.0

atcaccgtatgaaatccattcaccgtgatg	CRISPR spacer
atcaccgtatgaaatccattcaccgtgatg	Protospacer
******************************

2. spacer 1.2|936839|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 0, identity: 1.0

atcaccgtatgaaatccattcaccgtgatg	CRISPR spacer
atcaccgtatgaaatccattcaccgtgatg	Protospacer
******************************

3. spacer 1.4|936971|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 0, identity: 1.0

aaaacgattatgtttgtgctatgtgcggcg	CRISPR spacer
aaaacgattatgtttgtgctatgtgcggcg	Protospacer
******************************

4. spacer 1.5|937037|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 0, identity: 1.0

atcaccgtatgaaatccattcaccgtgatg	CRISPR spacer
atcaccgtatgaaatccattcaccgtgatg	Protospacer
******************************

5. spacer 1.6|937103|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 0, identity: 1.0

atcaccgtatgaaatccattcaccgtgatg	CRISPR spacer
atcaccgtatgaaatccattcaccgtgatg	Protospacer
******************************

6. spacer 1.7|937169|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

aacaaaattgaatatagggatttaaatggt	CRISPR spacer
aacaaaattgaatatagggatttaaatggt	Protospacer
******************************

7. spacer 1.7|937169|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

aacaaaattgaatatagggatttaaatggt	CRISPR spacer
aacaaaattgaatatagggatttaaatggt	Protospacer
******************************

8. spacer 1.8|937235|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MK448334 (Streptococcus satellite phage Javan147, complete genome) position: , mismatch: 5, identity: 0.833

atttatcatcactaaatattta-tctccact	CRISPR spacer
gtttattatcactaaatatttagacaccac-	Protospacer
.*****.***************  * ****

9. spacer 1.8|937235|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MK448337 (Streptococcus satellite phage Javan152, complete genome) position: , mismatch: 5, identity: 0.833

atttatcatcactaaatattta-tctccact	CRISPR spacer
gtttattatcactaaatatttagacaccac-	Protospacer
.*****.***************  * ****

10. spacer 1.14|937631|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to KU878088 (Bacillus phage AR9, complete genome) position: , mismatch: 5, identity: 0.833

tggtttaat----actgtaaattgttcaatatca	CRISPR spacer
----ttaattccaactgtaaattgtacaatatca	Protospacer
    *****    ************ ********

11. spacer 1.14|937631|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MF360957 (Bacillus virus PBS1, complete genome) position: , mismatch: 5, identity: 0.833

tggtttaat----actgtaaattgttcaatatca	CRISPR spacer
----ttaattccaactgtaaattgtacaatatca	Protospacer
    *****    ************ ********

12. spacer 1.1|936773|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448518 (Streptococcus satellite phage Javan50, complete genome) position: , mismatch: 6, identity: 0.8

atcaccgtatgaaatccattcaccgtgatg	CRISPR spacer
atcaccgtacgaaatccattcgctacgacg	Protospacer
*********.***********.*...**.*

13. spacer 1.2|936839|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448518 (Streptococcus satellite phage Javan50, complete genome) position: , mismatch: 6, identity: 0.8

atcaccgtatgaaatccattcaccgtgatg	CRISPR spacer
atcaccgtacgaaatccattcgctacgacg	Protospacer
*********.***********.*...**.*

14. spacer 1.3|936905|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 6, identity: 0.8

tgtcaattttcgtgtaaaggaggtaacttt	CRISPR spacer
tgtcaatttttgtgtaaaggaggtcctatg	Protospacer
**********.*************  . *

15. spacer 1.3|936905|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 6, identity: 0.8

tgtcaattttcgtgtaaaggaggtaacttt	CRISPR spacer
tgtcaatttttgtgtaaaggaggtcctatg	Protospacer
**********.*************  . *

16. spacer 1.3|936905|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 6, identity: 0.8

tgtcaattttcgtgtaaaggaggtaacttt	CRISPR spacer
tgtcaatattcgtgtaaaggaggtcttatg	Protospacer
******* ****************  . *

17. spacer 1.3|936905|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448995 (Streptococcus phage Javan626, complete genome) position: , mismatch: 6, identity: 0.8

tgtcaattttcgtgtaaaggaggtaacttt	CRISPR spacer
tgtcaatttttatgtaaaggaggtagagat	Protospacer
**********..*************.   *

18. spacer 1.4|936971|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 6, identity: 0.8

aaaacgattatgtttgtgctatgtgcggcg	CRISPR spacer
agagtgattatgtctgtgctatgtgtggag	Protospacer
*.*..********.***********.** *

19. spacer 1.4|936971|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448740 (Streptococcus phage Javan367, complete genome) position: , mismatch: 6, identity: 0.8

aaaacgattatgtttgtgctatgtgcggcg	CRISPR spacer
aagctgattatgtctgtgcaatgtgcggag	Protospacer
**. .********.***** ******** *

20. spacer 1.5|937037|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448518 (Streptococcus satellite phage Javan50, complete genome) position: , mismatch: 6, identity: 0.8

atcaccgtatgaaatccattcaccgtgatg	CRISPR spacer
atcaccgtacgaaatccattcgctacgacg	Protospacer
*********.***********.*...**.*

21. spacer 1.6|937103|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448518 (Streptococcus satellite phage Javan50, complete genome) position: , mismatch: 6, identity: 0.8

atcaccgtatgaaatccattcaccgtgatg	CRISPR spacer
atcaccgtacgaaatccattcgctacgacg	Protospacer
*********.***********.*...**.*

22. spacer 1.10|937367|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015354 (Bacillus thuringiensis strain MYBT18246 plasmid p120416, complete sequence) position: , mismatch: 6, identity: 0.8

taaaaaataccaactatcaaaagtgatagt	CRISPR spacer
taaaaaagaccaactatgaaaagtcaaggg	Protospacer
******* ********* ****** * .*

23. spacer 1.12|937499|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019583 (Lactobacillus helveticus strain LH5 plasmid pCBTLH5_2, complete sequence) position: , mismatch: 6, identity: 0.8

--aaaccacttgatgctgtatctctcataaaa	CRISPR spacer
tcaaataa--agatgctttatctctcataaaa	Protospacer
  ***. *   ****** **************

24. spacer 1.12|937499|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018406 (Lactobacillus plantarum strain SN35N plasmid pSN35N-1, complete sequence) position: , mismatch: 6, identity: 0.8

--aaaccacttgatgctgtatctctcataaaa	CRISPR spacer
tcaaataa--agatgctttatctctcataaaa	Protospacer
  ***. *   ****** **************

25. spacer 1.12|937499|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NC_014386 (Lactobacillus helveticus R0052 plasmid pIR52-1, complete sequence) position: , mismatch: 6, identity: 0.8

--aaaccacttgatgctgtatctctcataaaa	CRISPR spacer
tcaaataa--agatgctttatctctcataaaa	Protospacer
  ***. *   ****** **************

26. spacer 1.13|937565|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MN855659 (Bacteriophage sp. isolate 142, complete genome) position: , mismatch: 6, identity: 0.8

attgtgatacagatagtttatacctaaaaa	CRISPR spacer
atggcgatacagatagtttataccttgatg	Protospacer
** *.******************** .* .

27. spacer 1.13|937565|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to JQ309827 (Enterococcus phage vB_Efae230P-4, complete genome) position: , mismatch: 6, identity: 0.8

attgtgatacagatagtttatacctaaaaa	CRISPR spacer
attgtgatacagacagtttatatatgatta	Protospacer
*************.********. *.*  *

28. spacer 1.13|937565|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NC_049932 (Enterococcus phage vB_EfaP_Ef6.2, complete genome) position: , mismatch: 6, identity: 0.8

attgtgatacagatagtttatacctaaaaa	CRISPR spacer
attgtgacacagacagtttatacatgatta	Protospacer
*******.*****.********* *.*  *

29. spacer 1.13|937565|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NC_049933 (Enterococcus phage vB_EfaP_Ef6.3, complete genome) position: , mismatch: 6, identity: 0.8

attgtgatacagatagtttatacctaaaaa	CRISPR spacer
attgtgatacagatagtctttacatgatta	Protospacer
*****************.* *** *.*  *

30. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038792 (Escherichia coli strain PF9285 plasmid pDW54_1, complete sequence) position: , mismatch: 6, identity: 0.793

ccctcaatttattgacattattaatataa	CRISPR spacer
aatttaatttattgatattattaaaataa	Protospacer
  .*.**********.******** ****

31. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR792629 (Klebsiella pneumoniae isolate SB5881 plasmid SB5881_II) position: , mismatch: 6, identity: 0.793

ccctcaatttattgacattattaatataa	CRISPR spacer
aatttaatttattgatattattaaaataa	Protospacer
  .*.**********.******** ****

32. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_FO834905 (Klebsiella pneumoniae strain Kp52.145 plasmid II, complete sequence) position: , mismatch: 6, identity: 0.793

ccctcaatttattgacattattaatataa	CRISPR spacer
aatttaatttattgatattattaaaataa	Protospacer
  .*.**********.******** ****

33. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NC_019254 (Shigella sp. MO17 plasmid pMO17_54, complete sequence) position: , mismatch: 6, identity: 0.793

ccctcaatttattgacattattaatataa	CRISPR spacer
aatttaatttattgatattattaaaataa	Protospacer
  .*.**********.******** ****

34. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MH622943 (Myoviridae sp. isolate ctbc_4, complete genome) position: , mismatch: 6, identity: 0.793

ccctcaatttattgacattattaatataa	CRISPR spacer
atataaattcattgacattaataatataa	Protospacer
 . * ****.********** ********

35. spacer 1.16|937762|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MK580972 (Stenotrophomonas phage YB07, complete genome) position: , mismatch: 6, identity: 0.8

aaaaagagccagaaactcaatcagaagaaa	CRISPR spacer
cagaggagccagaatctcaatcagaaggta	Protospacer
 *.*.********* ************. *

36. spacer 2.7|1516254|30|NZ_CP008813|CRT matches to NC_019418 (Streptococcus phage phiNJ2, complete genome) position: , mismatch: 6, identity: 0.8

tgtggaagcactggtacttgctgatgtgga	CRISPR spacer
aatggatgcactggtacttgctgaatttga	Protospacer
 .**** *****************  * **

37. spacer 2.9|1516338|30|NZ_CP008813|CRT matches to NC_019418 (Streptococcus phage phiNJ2, complete genome) position: , mismatch: 6, identity: 0.8

tgtggaagcactggtacttgctgatgtgga	CRISPR spacer
aatggatgcactggtacttgctgaatttga	Protospacer
 .**** *****************  * **

38. spacer 3.2|2012160|30|NZ_CP008813|CRT matches to NC_042040 (Rhodococcus phage Trina, complete genome) position: , mismatch: 6, identity: 0.8

tagcctctggtctggcctctggcttaacgt	CRISPR spacer
tagcctctggtgtggcatctggctttgcag	Protospacer
*********** **** ******** .*.

39. spacer 1.4|936971|30|NZ_CP008813|CRISPRCasFinder,CRT matches to MK448917 (Streptococcus phage Javan362, complete genome) position: , mismatch: 7, identity: 0.767

aaaacgattatgtttgtgctatgtgcggcg	CRISPR spacer
agtctgattatgtttgtgcgatgtgtggtg	Protospacer
*.  .************** *****.**.*

40. spacer 1.7|937169|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027861 (Ahniella affigens strain D13 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

aacaaaattgaatatagggatttaaatggt	CRISPR spacer
cattaccttgaatataggggtttaaatcgt	Protospacer
 *. *  ************.******* **

41. spacer 1.10|937367|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 7, identity: 0.767

taaaaaataccaactatcaaaagtgatagt	CRISPR spacer
taaaaaatactaactatcaaactggagatg	Protospacer
**********.**********   ** *

42. spacer 1.10|937367|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046372 (Spiroplasma citri strain LB 319 plasmid pScpLB319-1, complete sequence) position: , mismatch: 7, identity: 0.767

taaaaaataccaactatcaaaagtgatagt	CRISPR spacer
taaaaaatactaactatcaaactggagatg	Protospacer
**********.**********   ** *

43. spacer 1.10|937367|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047440 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-3, complete sequence) position: , mismatch: 7, identity: 0.767

taaaaaataccaactatcaaaagtgatagt	CRISPR spacer
taaaaaatactaactatcaaactggagatg	Protospacer
**********.**********   ** *

44. spacer 1.13|937565|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MW149109 (Microvirus sp. isolate gila12, complete genome) position: , mismatch: 7, identity: 0.767

attgtgatacagatagtttatacctaaaaa	CRISPR spacer
agagatttatagatagtttatacccaaaaa	Protospacer
*  *   **.**************.*****

45. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to AP022644 (Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence) position: , mismatch: 7, identity: 0.759

ccctcaatttattgacattattaatataa	CRISPR spacer
gaatcaatttattgagattataaatatcg	Protospacer
   ************ ***** ***** .

46. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044263 (Campylobacter armoricus strain CA639 plasmid pCA639-2, complete sequence) position: , mismatch: 7, identity: 0.759

ccctcaatttattgacattattaatataa	CRISPR spacer
ttattaatttattaacattattattatat	Protospacer
.. *.********.********* ****

47. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009650 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence) position: , mismatch: 7, identity: 0.759

ccctcaatttattgacattattaatataa	CRISPR spacer
tacagcatttattgatattattaatagaa	Protospacer
. *   *********.********** **

48. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to CP016196 (Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-2, complete sequence) position: , mismatch: 7, identity: 0.759

ccctcaatttattgacattattaatataa	CRISPR spacer
tacagcatttattgatattattaatagaa	Protospacer
. *   *********.********** **

49. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NC_019507 (Campylobacter phage CP21, complete genome) position: , mismatch: 7, identity: 0.759

ccctcaatttattgacattattaatataa	CRISPR spacer
tcagacatttattgatattattaatatta	Protospacer
.*    *********.*********** *

50. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MT932329 (Campylobacter phage F379, complete genome) position: , mismatch: 7, identity: 0.759

ccctcaatttattgacattattaatataa	CRISPR spacer
tcagacatttattgatattattaatatta	Protospacer
.*    *********.*********** *

51. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MN693878 (Marine virus AFVG_250M440, complete genome) position: , mismatch: 7, identity: 0.759

ccctcaatttattgacattattaatataa	CRISPR spacer
gtattgatttattaaaattattaatataa	Protospacer
 . *..*******.* *************

52. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to HE815464 (Campylobacter phage CP21 complete sequence) position: , mismatch: 7, identity: 0.759

ccctcaatttattgacattattaatataa	CRISPR spacer
tcagacatttattgatattattaatatta	Protospacer
.*    *********.*********** *

53. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to FN667788 (Campylobacter phage CP220, complete genome) position: , mismatch: 7, identity: 0.759

ccctcaatttattgacattattaatataa	CRISPR spacer
tcagacatttattgatattattaatatta	Protospacer
.*    *********.*********** *

54. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053732 (Escherichia coli strain CP55_Sichuan plasmid pCP55-IncFIB, complete sequence) position: , mismatch: 7, identity: 0.759

ccctcaatttattgacattattaatataa	CRISPR spacer
aatttaatttattgatattattaataata	Protospacer
  .*.**********.**********  *

55. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007625 (Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

ccctcaatttattgacattattaatataa	CRISPR spacer
tacagcatttattgatattattaatagaa	Protospacer
. *   *********.********** **

56. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to CP043759 (Escherichia coli strain CVM N55972 plasmid pN55972-1, complete sequence) position: , mismatch: 7, identity: 0.759

ccctcaatttattgacattattaatataa	CRISPR spacer
aatttaatttattgatattattaataata	Protospacer
  .*.**********.**********  *

57. spacer 1.16|937762|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MN095772 (Stenotrophomonas phage Moby, complete genome) position: , mismatch: 7, identity: 0.767

aaaaagagccagaaactcaatcagaagaaa	CRISPR spacer
cagcggagccagaatctcaatcagaaggta	Protospacer
 *. .********* ************. *

58. spacer 1.17|937828|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MT375042 (Acinetobacter phage vB_AbaP_Alexa, complete genome) position: , mismatch: 7, identity: 0.767

tggtgttggctgttctgggatgactacgtt	CRISPR spacer
tggtgttggctgttctggaatggtcggctt	Protospacer
******************.***....  **

59. spacer 3.3|2012208|30|NZ_CP008813|CRT matches to MH616814 (Microviridae sp. isolate ctjj954, complete genome) position: , mismatch: 7, identity: 0.767

tagcctctggtttggcttctggcttagcct	CRISPR spacer
tagcctctggttttgcttctggtctgctcg	Protospacer
************* ********..*. .*

60. spacer 1.4|936971|30|NZ_CP008813|CRISPRCasFinder,CRT matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 8, identity: 0.733

aaaacgattatgtttgtgctatgtgcggcg	CRISPR spacer
ggggccgttttgtttgtgctgtgtgcggcg	Protospacer
....* .** **********.*********

61. spacer 1.9|937301|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to LT960608 (Bacillus phage SBSphiJ genome assembly, complete genome: monopartite) position: , mismatch: 8, identity: 0.733

acatttaacaggtagttaatatcctcatcg	CRISPR spacer
ttagagaagaggtagttaacatcctcatca	Protospacer
 .*   ** **********.*********.

62. spacer 1.10|937367|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to KY653128 (Staphylococcus phage IME1364_01, complete genome) position: , mismatch: 8, identity: 0.733

taaaaaataccaactatcaaaagtgatagt	CRISPR spacer
acaaaaatatcaattatcaaaagtggttaa	Protospacer
  *******.***.***********.* .

63. spacer 1.10|937367|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MF417959 (Uncultured Caudovirales phage clone 2F_5, partial genome) position: , mismatch: 8, identity: 0.733

taaaaaataccaactatcaaaagtgatagt	CRISPR spacer
acaaaaatatcaattatcaaaagtggttca	Protospacer
  *******.***.***********.*

64. spacer 1.10|937367|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NC_015386 (Treponema succinifaciens DSM 2489 plasmid pTRESU01, complete sequence) position: , mismatch: 8, identity: 0.733

taaaaaataccaactatcaaaagtgatagt	CRISPR spacer
aaaaaattaccaactatcaaaattataaac	Protospacer
 ***** *************** *.  *..

65. spacer 1.10|937367|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to HQ632860 (Vibrio phage jenny 12G5 genomic sequence) position: , mismatch: 8, identity: 0.733

taaaaaataccaactatcaaa--agtgatagt	CRISPR spacer
taaaacataccaactatcaaatcaacacca--	Protospacer
***** ***************  *... .*

66. spacer 1.14|937631|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MK017819 (Clostridium phage CPD4, complete genome) position: , mismatch: 8, identity: 0.733

tggtttaatactgtaaattgttcaatatca	CRISPR spacer
gactttaatactgtaaagtgttcattaggc	Protospacer
 . ************** ****** **

67. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX686749 (Campylobacter coli strain Tx40 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

68. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to KM659092 (Ochrobactrum sp. LM19 plasmid pLM19O2, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
aatggaatttattgacatgattaataaga	Protospacer
  .  ************* ******* .*

69. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007180 (Campylobacter coli RM5611 plasmid pRM5611_48kb, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

70. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017869 (Campylobacter coli strain MG1116 plasmid pCCDM116L, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

71. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044166 (Campylobacter coli strain AR-0416 plasmid pAR-0416) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

72. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023544 (Campylobacter jejuni strain CFSAN032806 plasmid pCFSAN032806, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

73. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to CP002030 (Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

74. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017419 (Campylobacter jejuni strain MTVDSCj16 plasmid pMTVDSCj16-1, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

75. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017866 (Campylobacter coli strain YF2105 plasmid pCCDM105L, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

76. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017879 (Campylobacter coli strain BG2108 plasmid pCCDM108L, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

77. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017416 (Campylobacter jejuni strain MTVDSCj07 plasmid pMTVDSCj07-1, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

78. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017872 (Campylobacter coli strain BP3183 plasmid pCCDM183, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

79. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020775 (Campylobacter jejuni strain YH002 plasmid pCJP002, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

80. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NC_022355 (Campylobacter coli CVM N29710 plasmid pN29710-1, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

81. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031069 (Bacillus sp. JAS24-2 plasmid pl626, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
aaaaaaaattattgaaattattaatatac	Protospacer
     ** ******* ************

82. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045793 (Campylobacter coli strain CFSAN032805 plasmid p1CFSAN032805, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

83. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NC_017282 (Campylobacter jejuni subsp. jejuni S3 plasmid pTet, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

84. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to CP047483 (Campylobacter jejuni strain CFSAN096297 plasmid CFSAN096297, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

85. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023546 (Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_1, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

86. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017026 (Campylobacter coli plasmid pCC14983A-1, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

87. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017877 (Campylobacter coli strain ZV1224 plasmid pCCDM224L, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

88. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017861 (Campylobacter jejuni strain TS1218 plasmid pCJDM218, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

89. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK541988 (Campylobacter coli strain CVM N61740F plasmid pN61740F, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

90. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK541989 (Campylobacter coli strain CVM N61925F plasmid pN61925F, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

91. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to NC_022354 (Campylobacter jejuni subsp. jejuni 00-2544 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
tgatatttttattgaaattattaatatat	Protospacer
.  *   ******** ************

92. spacer 1.15|937697|29|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to AP014085 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C2A-MedDCM-OCT-S36-C93, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.724

ccctcaatttattgacattattaatataa	CRISPR spacer
gactccatttattgagattattaattgtt	Protospacer
  *** ********* *********

93. spacer 2.7|1516254|30|NZ_CP008813|CRT matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

tgtggaagcactggtacttgctgatgtgga	CRISPR spacer
ttctctagcactggtacttgctgttgtcgc	Protospacer
* .   ***************** *** *

94. spacer 2.9|1516338|30|NZ_CP008813|CRT matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

tgtggaagcactggtacttgctgatgtgga	CRISPR spacer
ttctctagcactggtacttgctgttgtcgc	Protospacer
* .   ***************** *** *

95. spacer 3.3|2012208|30|NZ_CP008813|CRT matches to NC_028835 (Lactobacillus phage CL2, complete genome) position: , mismatch: 8, identity: 0.733

tagcctctggtttggcttctggcttagcct	CRISPR spacer
ttcattctggtttgccttctggcttagtac	Protospacer
*   .********* ************. .

96. spacer 3.3|2012208|30|NZ_CP008813|CRT matches to KR905066 (Lactobacillus phage CL1, complete genome) position: , mismatch: 8, identity: 0.733

tagcctctggtttggcttctggcttagcct	CRISPR spacer
ttcattctggtttgccttctggcttagtac	Protospacer
*   .********* ************. .

97. spacer 3.3|2012208|30|NZ_CP008813|CRT matches to NC_028911 (Lactobacillus phage iLp1308, complete genome) position: , mismatch: 8, identity: 0.733

tagcctctggtttggcttctggcttagcct	CRISPR spacer
ttcattctggtttgccttctggcttagtac	Protospacer
*   .********* ************. .

98. spacer 1.14|937631|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MN417334 (Clostridium phage CPAS-15, complete genome) position: , mismatch: 9, identity: 0.7

tggtttaatactgtaaattgttcaatatca	CRISPR spacer
gatcttaatactgtaaagtgttcattaggc	Protospacer
 . .************* ****** **

99. spacer 1.14|937631|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to KY206887 (Clostridium phage Clo-PEP-1, complete genome) position: , mismatch: 9, identity: 0.7

tggtttaatactgtaaattgttcaatatca	CRISPR spacer
gaccttaatactgtaaagtgttcattaggc	Protospacer
 . .************* ****** **

100. spacer 1.14|937631|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MF001357 (Clostridium phage CP3, partial genome) position: , mismatch: 9, identity: 0.7

tggtttaatactgtaaattgttcaatatca	CRISPR spacer
gaccttaatactgtaaagtgttcattaggc	Protospacer
 . .************* ****** **

101. spacer 1.16|937762|30|NZ_CP008813|CRISPRCasFinder,CRT,PILER-CR matches to MN693441 (Marine virus AFVG_25M481, complete genome) position: , mismatch: 9, identity: 0.7

aaaaagagccagaaactcaatcagaagaaa	CRISPR spacer
ccatcctatcacaaactcaatcagaagaaa	Protospacer
  *    ..** ******************

102. spacer 3.3|2012208|30|NZ_CP008813|CRT matches to KR905069 (Lactobacillus phage iLp84, complete genome) position: , mismatch: 9, identity: 0.7

tagcctctggtttggcttctggcttagcct	CRISPR spacer
ctcattctggttcgccttctggcttagcac	Protospacer
.   .*******.* ************* .

103. spacer 3.3|2012208|30|NZ_CP008813|CRT matches to KU848186 (Lactobacillus phage PLE3, complete genome) position: , mismatch: 9, identity: 0.7

tagcctctggtttggcttctggcttagcct	CRISPR spacer
ctcattctggttcgccttctggcttagcac	Protospacer
.   .*******.* ************* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

34795 : 42901

Mollivirus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000638885.1\|34795_36250_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.2e-54	32.7
WP_001291326.1\|36277_37300_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	6.9e-63	44.3
WP_000685110.1\|37467_38016_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.4e-25	35.6
WP_000780018.1\|38038_38791_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000166556.1\|38810_40358_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	8.7e-78	48.9
WP_001045907.1\|40550_41450_+	peptidoglycan DD-metalloendopeptidase family protein	A0A221J6U0	Arthrobacter_phage	4.1e-19	45.9
WP_000783420.1\|41596_42901_+	LysM peptidoglycan-binding domain-containing protein	F1B2Q4	Tsukamurella_phage	3.0e-10	35.8

DBSCAN-SWA_2

564665 : 574631

Streptococcus_phage(91.67%)

integrase

attL 559917:559932|attR 576821:576836

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
559917:559932	attL	NA	NA	NA	NA
WP_000137373.1\|564665_565121_-	YueI family protein	W6LLD2	Streptococcus_phage	7.8e-27	48.9
WP_000022832.1\|565318_566626_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	1.5e-235	95.4
WP_001021808.1\|566785_567949_-\|integrase	site-specific integrase	A0A1X9I6A9	Streptococcus_phage	4.7e-209	93.0
WP_000528105.1\|568021_568537_-	helix-turn-helix transcriptional regulator	Q9AZN3	Lactococcus_phage	2.6e-10	47.9
WP_000587633.1\|568688_568877_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001218610.1\|569053_569329_+	hypothetical protein	A0A1X9I5W5	Streptococcus_phage	2.7e-38	90.1
WP_000998226.1\|569318_569522_+	hypothetical protein	A0A1X9I5V6	Streptococcus_phage	8.9e-23	85.1
WP_017647089.1\|569514_569670_+	hypothetical protein	NA	NA	NA	NA
WP_000190301.1\|569729_569996_+	hypothetical protein	A0A1X9I6M4	Streptococcus_phage	6.1e-40	96.6
WP_017647090.1\|570006_570165_+	hypothetical protein	A0A1X9I5Z1	Streptococcus_phage	7.1e-20	88.5
WP_000237852.1\|570171_570342_+	hypothetical protein	K4JU69	Streptococcus_phage	8.8e-08	73.0
WP_001883560.1\|570355_571144_+	DnaD domain protein	A0A1X9I617	Streptococcus_phage	4.2e-129	87.5
WP_000957430.1\|571159_572005_+	ATP-binding protein	A0A1X9I6C4	Streptococcus_phage	4.5e-145	92.1
WP_000273649.1\|572262_572445_+	hypothetical protein	NA	NA	NA	NA
WP_000213653.1\|572542_573121_+	hypothetical protein	NA	NA	NA	NA
WP_000639503.1\|573117_573405_+	hypothetical protein	NA	NA	NA	NA
WP_000918211.1\|573443_573872_+	hypothetical protein	NA	NA	NA	NA
WP_000624041.1\|573864_574191_+	hypothetical protein	NA	NA	NA	NA
WP_000162609.1\|574208_574631_+	hypothetical protein	K4JTJ9	Streptococcus_phage	1.1e-30	51.6
576821:576836	attR	NA	NA	NA	NA

DBSCAN-SWA_3

619822 : 637345

Streptococcus_phage(100.0%)

integrase

attL 633576:633592|attR 643847:643863

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000420682.1\|619822_620137_+	YdcP family protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
WP_000985015.1\|620152_620539_+	YdcP family protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
WP_000813488.1\|620567_621953_+	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
WP_000879507.1\|621955_622108_+	hypothetical protein	NA	NA	NA	NA
WP_000398284.1\|622130_623336_+	replication initiation factor domain-containing protein	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
WP_001009056.1\|623378_623600_+	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
WP_000342539.1\|623716_624214_+	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
WP_000506270.1\|624188_624695_+	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
WP_069107295.1\|624678_627126_+	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	99.9
WP_069107294.1\|627128_629306_+	hypothetical protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	99.9
WP_000769868.1\|629302_630304_+	bifunctional lysozyme/C40 family peptidase	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
WP_001224319.1\|630300_631233_+	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	1.1e-171	100.0
WP_001791010.1\|631477_631594_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_000691727.1\|631609_633529_+	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	100.0
633576:633592	attL	NA	NA	NA	NA
WP_000336323.1\|633647_633815_+	cysteine-rich KTR domain-containing protein	D0R0F6	Streptococcus_phage	1.6e-14	68.0
WP_001227347.1\|633874_634228_-	helix-turn-helix domain-containing protein	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
WP_000804885.1\|634732_635155_+	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
WP_000857133.1\|635151_635382_+	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
WP_000814511.1\|635842_636046_+	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
WP_001291561.1\|636127_637345_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
643847:643863	attR	NA	NA	NA	NA

DBSCAN-SWA_4

950538 : 1001559

Streptococcus_phage(75.51%)

protease,capsid,head,terminase,holin,tail,integrase,transposase,portal

attL 950479:950496|attR 995361:995378

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
950479:950496	attL	NA	NA	NA	NA
WP_017646500.1\|950538_951627_-\|integrase	site-specific integrase	J7KBT5	Streptococcus_phage	1.9e-204	100.0
WP_017646499.1\|951742_952195_-	hypothetical protein	J7KGT3	Streptococcus_phage	1.4e-81	100.0
WP_069107281.1\|952419_953169_-	helix-turn-helix domain-containing protein	A0A097PBE5	Streptococcus_pyogenes_phage	2.4e-81	64.5
WP_000871400.1\|953552_953711_+	hypothetical protein	NA	NA	NA	NA
WP_000526874.1\|953867_954443_+	hypothetical protein	NA	NA	NA	NA
WP_017648778.1\|954690_954861_+	hypothetical protein	NA	NA	NA	NA
WP_000245838.1\|954841_955720_-	DUF4393 domain-containing protein	NA	NA	NA	NA
WP_000658998.1\|955780_955984_+	hypothetical protein	NA	NA	NA	NA
WP_000359716.1\|955967_956327_-	hypothetical protein	NA	NA	NA	NA
WP_001157159.1\|956399_956606_+	helix-turn-helix domain-containing protein	A0A1X9I5S3	Streptococcus_phage	1.1e-17	64.7
WP_000158652.1\|956646_956979_+	hypothetical protein	J7KBZ0	Streptococcus_phage	8.4e-55	100.0
WP_000360288.1\|957083_957419_-	hypothetical protein	J7KDN7	Streptococcus_phage	7.8e-16	69.1
WP_000263692.1\|957564_957750_+	helix-turn-helix transcriptional regulator	J7KH19	Streptococcus_phage	4.1e-27	100.0
WP_000963484.1\|957829_958120_+	hypothetical protein	J7KJ26	Streptococcus_phage	5.1e-48	100.0
WP_000431177.1\|958121_958346_+	hypothetical protein	J7KBY5	Streptococcus_phage	5.3e-37	100.0
WP_001080863.1\|958359_958662_+	hypothetical protein	J7KDL8	Streptococcus_phage	2.3e-51	100.0
WP_001058282.1\|958654_958855_+	hypothetical protein	J7KK69	Streptococcus_phage	9.3e-33	100.0
WP_000650504.1\|958851_959142_+	hypothetical protein	J7KDN2	Streptococcus_phage	8.2e-38	100.0
WP_069107280.1\|959128_959821_+	AAA family ATPase	J7KC09	Streptococcus_phage	4.4e-130	99.6
WP_142325671.1\|959916_961152_+	DEAD/DEAH box helicase family protein	J7KK96	Streptococcus_phage	2.3e-238	100.0
WP_069107278.1\|961167_961626_+	DUF669 domain-containing protein	A0A1P8VVN0	Streptococcus_phage	1.5e-81	98.7
WP_069107277.1\|961629_962442_+	bifunctional DNA primase/polymerase	J7KH42	Streptococcus_phage	2.5e-156	100.0
WP_069107276.1\|962431_963913_+	DNA primase family protein	A0A1P8VVM0	Streptococcus_phage	4.0e-290	96.8
WP_069107275.1\|964157_964475_+	VRR-NUC domain-containing protein	J7KC03	Streptococcus_phage	2.0e-53	100.0
WP_069107274.1\|964553_964856_+	DUF1599 domain-containing protein	J7KBY0	Streptococcus_phage	3.3e-42	92.3
WP_069107273.1\|964990_965407_+	hypothetical protein	Q938M1	Temperate_phage	6.7e-33	59.2
WP_079851786.1\|965403_965580_+	DUF1653 domain-containing protein	NA	NA	NA	NA
WP_069107272.1\|965772_965949_+	peptide chain release factor 2	NA	NA	NA	NA
WP_088881670.1\|965945_966137_+	hypothetical protein	NA	NA	NA	NA
WP_088881664.1\|966154_967299_-\|transposase	IS3 family transposase	A0A1P8CWP5	Bacillus_phage	2.6e-10	39.5
WP_069107269.1\|967820_968414_+	DUF1642 domain-containing protein	Q938L9	Temperate_phage	2.8e-16	42.1
WP_003052405.1\|969015_969453_+	DUF1492 domain-containing protein	A0A097PBF1	Streptococcus_pyogenes_phage	3.6e-77	100.0
WP_069107268.1\|970014_970392_-	type II toxin-antitoxin system HicB family antitoxin	I3NLB2	Bifidobacterium_phage	1.1e-15	42.1
WP_001132272.1\|970443_970629_-	type II toxin-antitoxin system HicA family toxin	F0PIL1	Enterococcus_phage	3.5e-10	61.3
WP_000687301.1\|970854_971172_+	HNH endonuclease	A3F639	Streptococcus_phage	1.1e-30	69.1
WP_000343900.1\|971308_971665_+	hypothetical protein	A0A2H4JAH7	uncultured_Caudovirales_phage	3.0e-34	61.0
WP_069107267.1\|971661_973305_+\|terminase	terminase large subunit	A0A1S5SF58	Streptococcus_phage	5.3e-267	80.3
WP_000764511.1\|973315_973639_+	hypothetical protein	NA	NA	NA	NA
WP_069107266.1\|973710_974859_+\|portal	phage portal protein	A0A1S5SFG8	Streptococcus_phage	8.7e-107	53.0
WP_069107265.1\|974839_975571_+\|protease	Clp protease ClpP	A0A1S5SFF8	Streptococcus_phage	1.4e-73	61.1
WP_000178057.1\|975592_976753_+\|capsid	phage major capsid protein	A0A1S5SFB4	Streptococcus_phage	3.6e-116	57.6
WP_000343312.1\|976756_977050_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JAA9	uncultured_Caudovirales_phage	9.5e-10	42.5
WP_000868405.1\|977021_977171_+	hypothetical protein	NA	NA	NA	NA
WP_000087630.1\|977163_977511_+	hypothetical protein	A3F648	Streptococcus_phage	3.7e-29	55.7
WP_032457488.1\|977535_977907_+	HK97 gp10 family phage protein	A3F649	Streptococcus_phage	3.4e-52	78.9
WP_000237791.1\|977899_978280_+	hypothetical protein	A3F650	Streptococcus_phage	1.8e-40	64.3
WP_001149163.1\|978294_978900_+	hypothetical protein	A3F651	Streptococcus_phage	1.2e-70	74.1
WP_001281299.1\|978910_979213_+	hypothetical protein	A3F652	Streptococcus_phage	7.5e-34	69.4
WP_069107264.1\|979439_983363_+\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	0.0e+00	65.1
WP_088881664.1\|983576_984721_-\|transposase	IS3 family transposase	A0A1P8CWP5	Bacillus_phage	2.6e-10	39.5
WP_069107262.1\|986123_990251_+\|tail	phage tail protein	J7KBT9	Streptococcus_phage	0.0e+00	85.9
WP_069107261.1\|990263_992267_+	hypothetical protein	J7KC14	Streptococcus_phage	0.0e+00	86.5
WP_000883861.1\|992278_992671_+	DUF1366 domain-containing protein	J7KKA3	Streptococcus_phage	4.0e-11	37.7
WP_069107260.1\|992830_993133_+	hypothetical protein	J7KH30	Streptococcus_phage	3.0e-27	63.4
WP_069107259.1\|993125_993350_+\|holin	phage holin	A7J2B3	Streptococcus_phage	2.9e-27	91.9
WP_069107258.1\|993479_994823_+	lysin	Q5MY96	Streptococcus_phage	2.3e-252	94.4
WP_069107257.1\|995019_995208_+	Paratox	A3F673	Streptococcus_phage	3.3e-16	67.8
WP_001056394.1\|995801_996413_+	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	2.7e-54	54.9
995361:995378	attR	NA	NA	NA	NA
WP_000467141.1\|996449_997232_-	hypothetical protein	NA	NA	NA	NA
WP_000192683.1\|997243_997942_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-19	27.1
WP_000312256.1\|997942_998311_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000457945.1\|998454_1001559_+	DNA polymerase III subunit alpha	A0A0K1Y8J9	Streptomyces_phage	3.6e-115	28.9

DBSCAN-SWA_5

1176856 : 1215974

Streptococcus_phage(100.0%)

protease,capsid,head,terminase,holin,tail,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000756017.1\|1176856_1178422_-	recombinase family protein	Q6DMS5	Streptococcus_phage	1.6e-167	58.6
WP_000809548.1\|1178424_1179633_-	recombinase family protein	Q6DMS6	Streptococcus_phage	1.8e-102	50.3
WP_000138926.1\|1179689_1179851_-	hypothetical protein	Q6DMS7	Streptococcus_phage	7.5e-09	62.7
WP_000611948.1\|1179847_1180249_-	hypothetical protein	NA	NA	NA	NA
WP_000515886.1\|1180462_1181932_-	N-acetylmuramoyl-L-alanine amidase	A0A1X9I678	Streptococcus_phage	1.7e-227	79.3
WP_000661353.1\|1181933_1182338_-\|holin	phage holin family protein	D0R0E9	Streptococcus_phage	7.9e-47	76.3
WP_000796407.1\|1182355_1184212_-	hypothetical protein	Q6DMS9	Streptococcus_phage	4.0e-255	72.8
WP_069107252.1\|1184224_1187140_-\|tail	phage tail protein	Q6DMT0	Streptococcus_phage	0.0e+00	65.3
WP_000589861.1\|1187139_1187865_-	hypothetical protein	Q6DMT1	Streptococcus_phage	9.4e-83	57.9
WP_000918334.1\|1187861_1190981_-\|tail	phage tail tape measure protein	Q6DMT2	Streptococcus_phage	2.7e-243	76.4
WP_001249611.1\|1191163_1191583_-	hypothetical protein	A0A1X9I691	Streptococcus_phage	1.3e-55	76.3
WP_000818570.1\|1191594_1192164_-	hypothetical protein	A0A1B0RXE2	Streptococcus_phage	1.3e-98	95.2
WP_001209974.1\|1192166_1192493_-	hypothetical protein	M1Q1Z4	Streptococcus_phage	4.9e-39	70.4
WP_000161245.1\|1192501_1192870_-	HK97 gp10 family phage protein	Q6DMT7	Streptococcus_phage	5.3e-34	62.1
WP_000684956.1\|1192862_1193201_-\|head,tail	head-tail adaptor protein	A0A1B0RXE4	Streptococcus_phage	4.0e-36	68.8
WP_000988606.1\|1193200_1193458_-\|head,tail	phage gp6-like head-tail connector protein	D0R0D7	Streptococcus_phage	7.3e-30	78.8
WP_000040507.1\|1193454_1194663_-\|capsid	phage major capsid protein	E4ZFM5	Streptococcus_phage	3.1e-203	87.8
WP_001248758.1\|1194677_1195376_-\|protease	Clp protease ClpP	A0A1B0RXJ9	Streptococcus_phage	1.3e-100	79.7
WP_000523683.1\|1195320_1196658_-\|portal	phage portal protein	A0A1B0RXD8	Streptococcus_phage	8.8e-228	89.5
WP_000424368.1\|1196738_1197011_-	hypothetical protein	E4ZFM1	Streptococcus_phage	1.8e-07	58.1
WP_000666493.1\|1197029_1197335_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_001140390.1\|1197334_1197637_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_000220982.1\|1197691_1199284_-\|terminase	terminase large subunit	A0A1B0RXJ8	Streptococcus_phage	5.6e-306	95.5
WP_000290860.1\|1199280_1199754_-\|terminase	phage terminase small subunit P27 family	A0A1B0RXG3	Streptococcus_phage	2.9e-85	97.5
WP_000248475.1\|1199801_1200005_-	DUF4314 domain-containing protein	A0A1B0RXD4	Streptococcus_phage	3.3e-17	68.9
WP_000164556.1\|1200004_1200268_-	hypothetical protein	NA	NA	NA	NA
WP_000176346.1\|1200332_1201598_-	DNA (cytosine-5-)-methyltransferase	M1NSK8	Streptococcus_phage	2.2e-228	91.9
WP_000211621.1\|1201594_1202851_-	DNA modification methylase	A0A1B0RXJ0	Streptococcus_phage	4.7e-223	90.1
WP_001889274.1\|1202822_1203278_-	hypothetical protein	A0A1B0RXC6	Streptococcus_phage	4.7e-48	56.2
WP_001138024.1\|1203565_1203931_-	HNH endonuclease	A0A1B0RXJ3	Streptococcus_phage	2.4e-63	89.3
WP_000578147.1\|1203932_1204970_-	methionine adenosyltransferase	E4ZFL0	Streptococcus_phage	3.6e-168	83.8
WP_000166944.1\|1205018_1205201_-	hypothetical protein	A0A1B0RXC3	Streptococcus_phage	3.8e-25	96.7
WP_000356273.1\|1205384_1205861_-	hypothetical protein	A0A1B0RXB9	Streptococcus_phage	1.2e-81	96.8
WP_001176187.1\|1205853_1207230_-	DEAD/DEAH box helicase	M1Q214	Streptococcus_phage	1.1e-249	95.0
WP_025194113.1\|1207210_1207492_-	VRR-NUC domain-containing protein	M1PFY8	Streptococcus_phage	4.6e-38	80.6
WP_001160925.1\|1207772_1210061_-	hypothetical protein	A0A1B0RXC5	Streptococcus_phage	0.0e+00	87.1
WP_000077669.1\|1210418_1210742_+	hypothetical protein	D0R0B4	Streptococcus_phage	3.4e-32	72.0
WP_088881676.1\|1210734_1211856_+	DUF2800 domain-containing protein	D0R0B3	Streptococcus_phage	8.0e-198	89.2
WP_000105207.1\|1211860_1212424_+	DUF2815 family protein	A0A1B0RXA9	Streptococcus_phage	1.6e-90	92.3
WP_000158580.1\|1212443_1212611_+	hypothetical protein	E4ZFK2	Streptococcus_phage	1.8e-05	49.0
WP_001121831.1\|1212659_1214615_+	DNA polymerase	E4ZFK1	Streptococcus_phage	0.0e+00	86.0
WP_000182249.1\|1215377_1215974_-	hypothetical protein	M1Q222	Streptococcus_phage	2.2e-13	29.4

DBSCAN-SWA_6

1607027 : 1617760

Streptococcus_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000767486.1\|1607027_1607855_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	1.1e-124	78.0
WP_000287943.1\|1607895_1608252_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	5.2e-42	72.6
WP_000966772.1\|1608253_1608730_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	7.1e-39	50.9
WP_001167084.1\|1610029_1610578_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	2.2e-55	59.0
WP_000158399.1\|1610645_1611737_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	1.7e-165	78.0
WP_000603273.1\|1611869_1612505_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_000425861.1\|1612774_1613644_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.4e-109	70.4
WP_000358198.1\|1613643_1613970_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.2e-30	61.1
WP_000364568.1\|1614000_1614864_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.5e-74	50.0
WP_000715591.1\|1614883_1615519_-	dTMP kinase	M1PSC7	Streptococcus_phage	4.9e-67	61.1
WP_001144250.1\|1615607_1616267_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	3.6e-65	56.9
WP_000178146.1\|1616285_1616996_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-18	28.5
WP_001185985.1\|1616995_1617760_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.6e-14	24.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP008813

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection