CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number
NZ_CP017229	Campylobacter jejuni strain FORC_046 isolate Not reported chromosome, complete genome	3 crisprs	DEDDh,WYL,cas2,cas1,cas9,csa3	8
NZ_CP017231	Campylobacter jejuni strain FORC_046 isolate Not reported plasmid pFORC46.2, complete sequence	1 crisprs	NA	1
NZ_CP017230	Campylobacter jejuni strain FORC_046 isolate Not reported plasmid pFORC46.1, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017229_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017229_1

69640-69803

Orphan

Consensus_repeat	Method
AATTTAAATAAAGAAAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP017229_1

>merge|NZ_CP017229|1|69640-69803|PILER-CR
AATTTAAATAAAGAAAACAAAGACTTAAACAAAGATTTTAATAAAGAGTTAAATAAAAATCAAGAAAAAAACAATTTAAATCAAGAAAATATACAAGATCAAAATAAAAATTTAAAGAACAATAATCAAAATTTAAATCTTGATAAAAATTTAAATAAAGAAAT

>NZ_CP017229|1|1|69640-69803|PILER-CR
AATTTAAATAAAGAAAA	CAAAGACTTAAACAAAGATTTTAATAAAGAGTTAAATAAAAATCAAGAAAAAAAC
AATTTAAATCAAGAAAA	TATACAAGATCAAAATAAAAATTTAAAGAACAATAATCAAAATTTAAATCTTGATAAA
AATTTAAATAAAGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017229.1\|WP_002851683.1\|77376_77628_+\|anion-permease	unknown	unknown	gnl\|CDD\|279307
NZ_CP017229.1\|WP_002857760.1\|71468_73106_+\|flagellar-hook-protein-FlgE	unknown	unknown	gnl\|CDD\|224663
NZ_CP017229.1\|WP_002851977.1\|77655_78672_-\|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl\|CDD\|234664
NZ_CP017229.1\|WP_002799607.1\|66448_68257_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|224138
NZ_CP017229.1\|WP_002800608.1\|63207_64557_+\|DUF2130-domain-containing-protein	unknown	unknown	gnl\|CDD\|226889
NZ_CP017229.1\|WP_002868357.1\|76997_77261_+\|anion-permease	unknown	unknown	gnl\|CDD\|279307
NZ_CP017229.1\|WP_012006618.1\|59477_61175_+\|membrane-protein	unknown	unknown	gnl\|CDD\|234767
NZ_CP017229.1\|WP_088868012.1\|53008_56713_+\|Eco57I-restriction-modification-methylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|223934
NZ_CP017229.1\|WP_002857775.1\|76580_76925_+\|anion-permease	unknown	unknown	gnl\|CDD\|279307
NZ_CP017229.1\|WP_002857729.1\|76208_76358_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017229.1\|WP_002805290.1\|70580_71465_+\|flagellar-basal-body-rod-modification-protein	unknown	unknown	gnl\|CDD\|139245
NZ_CP017229.1\|WP_002857739.1\|74981_75701_-\|bacteriohemerythrin	unknown	unknown	gnl\|CDD\|225331
NZ_CP017229.1\|WP_002857661.1\|65801_66449_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017229.1\|WP_002878197.1\|56714_59456_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379274
NZ_CP017229.1\|WP_002911175.1\|73109_74981_-\|DUF342-domain-containing-protein	unknown	unknown	gnl\|CDD\|377177
NZ_CP017229.1\|WP_002782323.1\|61204_61906_-\|SIMPL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225414
NZ_CP017229.1\|WP_002860887.1\|64580_65624_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|225797
NZ_CP017229.1\|WP_002782892.1\|68391_68715_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017229.1\|WP_002871934.1\|61902_63105_-\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP017229.1\|WP_002869943.1\|76867_77083_+\|anion-permease	unknown	unknown	gnl\|CDD\|279307

Protein	Function_ID	Function_description	E-value
NZ_CP017229.1\|WP_002851683.1\|77376_77628_+\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	9.88132e-12
NZ_CP017229.1\|WP_002857760.1\|71468_73106_+\|flagellar-hook-protein-FlgE	gnl\|CDD\|224663	COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion].	2.24663e-99
NZ_CP017229.1\|WP_002799607.1\|66448_68257_-\|translational-GTPase-TypA	gnl\|CDD\|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NZ_CP017229.1\|WP_002800608.1\|63207_64557_+\|DUF2130-domain-containing-protein	gnl\|CDD\|226889	COG4487, COG4487, Uncharacterized protein conserved in bacteria [Function unknown].	1.38121e-83
NZ_CP017229.1\|WP_002868357.1\|76997_77261_+\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	7.36699e-11
NZ_CP017229.1\|WP_012006618.1\|59477_61175_+\|membrane-protein	gnl\|CDD\|234767	PRK00448, polC, DNA polymerase III PolC; Validated.	0.000796905
NZ_CP017229.1\|WP_088868012.1\|53008_56713_+\|Eco57I-restriction-modification-methylase-domain-containing-protein	gnl\|CDD\|223934	COG1002, COG1002, Type II restriction enzyme, methylase subunits [Defense mechanisms].	4.86248e-48
NZ_CP017229.1\|WP_002857775.1\|76580_76925_+\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	1.22755e-24
NZ_CP017229.1\|WP_002851977.1\|77655_78672_-\|tRNA-2-thiouridine(34)-synthase-MnmA	gnl\|CDD\|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	5.63815e-166
NZ_CP017229.1\|WP_002805290.1\|70580_71465_+\|flagellar-basal-body-rod-modification-protein	gnl\|CDD\|139245	PRK12812, flgD, flagellar basal body rod modification protein; Reviewed.	2.24585e-119
NZ_CP017229.1\|WP_002857739.1\|74981_75701_-\|bacteriohemerythrin	gnl\|CDD\|225331	COG2703, COG2703, Hemerythrin [Inorganic ion transport and metabolism].	5.09539e-46
NZ_CP017229.1\|WP_002878197.1\|56714_59456_+\|hypothetical-protein	gnl\|CDD\|379274	pfam13576, Pentapeptide_3, Pentapeptide repeats (9 copies).	8.45283e-06
NZ_CP017229.1\|WP_002911175.1\|73109_74981_-\|DUF342-domain-containing-protein	gnl\|CDD\|377177	pfam03961, FapA, Flagellar Assembly Protein A. Members of this family include FapA (flagellar assembly protein A), found in Vibrio vulnificus. The synthesis of flagella allows bacteria to respond to chemotaxis by facilitating motility. Studies examining the role of FapA show that the loss or delocalization of FapA results in a complete failure of the flagellar biosynthesis and motility in response to glucose mediated chemotaxis. The polar localization of FapA is required for flagellar synthesis, and dephosphorylated EIIAGlc (Glucose-permease IIA component) inhibited the polar localization of FapA through direct interaction.	2.8364e-31
NZ_CP017229.1\|WP_002782323.1\|61204_61906_-\|SIMPL-domain-containing-protein	gnl\|CDD\|225414	COG2859, COG2859, Uncharacterized protein conserved in bacteria [Function unknown].	3.3394e-85
NZ_CP017229.1\|WP_002860887.1\|64580_65624_-\|c-type-cytochrome	gnl\|CDD\|225797	COG3258, COG3258, Cytochrome c [Energy production and conversion].	2.74545e-130
NZ_CP017229.1\|WP_002871934.1\|61902_63105_-\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.09952e-88
NZ_CP017229.1\|WP_002869943.1\|76867_77083_+\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	2.3743e-08

>NZ_CP017229.1|WP_002782892.1|68391_68715_+|hypothetical-protein
MSKPLNEEIFVEFKSDLAERKNEVLLQVLELLETFRSDENEKMARISSELTEILENEENLEKILNAKNLEELLNILTALNEDKMIKVYEDSYLKEKFPNVMVDKFLK
>NZ_CP017229.1|WP_002799607.1|66448_68257_-|translational-GTPase-TypA
MENIRNIAVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDSNDIEKERGITILSKNTAINYKGTKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQEGVMPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALDANDEQLDFAIVYAAAKNGYAKLDLNDESDNMEPLFKTILERVPAPSGTNDNPLQLQVFTLGYDNFVGKIGIARIFNGVVKKNQSVMLAKADGTKVNGRISKLIGFMGLEKMDIEEAGSGDIVAIAGFEALDVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGTEGKHVTSNKIAERLEAEMKTNIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDGVKTEPFEHLVIDVPEEFSGAVIEKLGKRKAEMKTMAPTGDGQTRLEFEIPARGLIGFRSQFLTDTKGEGVMNHSFLEFRPFSGAVEKRNNGALISMENGVALGYSLFNLQERGVLFIEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKLSLERALEWIEEDELVEVTPVNVRVRKRYLDPTQRKRMEKAKS
>NZ_CP017229.1|WP_002857661.1|65801_66449_-|hypothetical-protein
MDLKSLENNRLYILKRLGILKFLSIIEALLIGFLAFVFIRDALIAVILAVFVGVFFFRFTAKKLKLAQKELQINALNLFLRRFGAKFKKQSLSQKDFLKLGLTKDLKEFKSQNCFEFKDFKIYDIQFLDENKRFFCGILLEILNANKNPSFENEEQIYIKLTDKNFALNHIFSKENHYLIATLSNPFFIDIKKDFENNFKNLEENLNSIKNKLFK
>NZ_CP017229.1|WP_002860887.1|64580_65624_-|c-type-cytochrome
MKKHILLLGLCLSLSLSAKSVSDYKVGEELSDKEGVEYFKELSKRPVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTESTLGPYSKLKKTSNEVNCISCHMDNDGNGLPGTKKYVIPFLNVLNNYPRLDIETMKIISVEDRIRGMGGTDSHRFPNDSKEMKAILAYFKWLKEAYGIKDGVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGERGLGVKNDNYEQGSGHLYPSLLIYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDEDALDIAAYVNTGFVRMPITTTENRAGLDTAYSKSPSLKPEYFASPQQNLDPKEYIKVKYGPWKNPNHFPGE
>NZ_CP017229.1|WP_002800608.1|63207_64557_+|DUF2130-domain-containing-protein
MQNLNQNEQIKCPSCGSFIDISTALYAQILDKAKQEMLKQKKEFDDEVNAKRAEYIKALNDLKTQKIEQEKLINEQVSQKLLLEKQKFEQELLTQKQNFQKEFSEKFNKEHENEMKIMQEELEKKSKELSEFLSIKAENERLKREQKENEERLKFQAKEEAFKEFKEQESKNLEFEREKMRLEFQKSTQEQDLKYKELETNFKSVAQKLEDAQRRIEQGSQQLQGEAAELLIEEYIQSEYLSDEVKEVPKGVNGADCLHIVKDNFGNICGSILYESKRTKEFNKEWLDKLKLDSIAAKSDIAVLITKTMPKDKEKTHFKEGILICTFNEFKGVLAVLRESIINAYKLKNALQNKDEKNHILYEYLNSKEFNTQITFILKTYQNMKEELEAEKRALQNIWKKRERAIENLSFNSTAIVSSLNAIFSDLQGGNLIGEEGIKSLENLAKDED
>NZ_CP017229.1|WP_002871934.1|61902_63105_-|multidrug-effflux-MFS-transporter
MQKHTKIHGFAKFKLIIILALMSSIAPLSTDMYLPALSHVEQSFQTNSFLTQLSIASFFIAFALGQLIYGPLSDIFGRKIPALVGIFFFIVSSLFCVIIDDIYAFIALRFFEALGGCAGVVIARAIVNDLFEIKEAAGIFALMMVFSSLAPMLSPTFGGILLEYFSWHSIFATLFALGILLFLMILFGLKESAPHLKNKKFSHHEAMKSYKFVLSDKRFLVYILCASFALAAMFAYITGSSFVFTQFFSLSEQKFALLFGANALGFVICANINARLVLKYESEKILAKALMIMFISTVILLANAFFHPNFLLFELSIFTSIAMLGFIAPNTTTLAMARFKEHSGTASAVLGTVQFGFAGLISFVVGAINANTPIILAFVMCACVLVANMIYFLIKIKEKK
>NZ_CP017229.1|WP_002782323.1|61204_61906_-|SIMPL-domain-containing-protein
MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQKEVEADTLILPIKFTRSNNNLTNLYEELEQDKENIIKFLKEQGVKEDEINYNSPNIIDRLSDPYSNDTQAAYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEYLYTKLNEIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYIKTIRVVSTIEYYLKD
>NZ_CP017229.1|WP_012006618.1|59477_61175_+|membrane-protein
MKEFDEKLAQYGIFTINGVENIDLIKKEIVLENISIERIDFNILQEKGIKRLIIKNSEILEIYFSKTNNFFIYFLNCDFKCKLIAKKCIFQDQVKFIKCIFEKCVDFNASKFKSKVSFTISIFKENARFIKTEFLAKCNNHKIIENNFKEVKFCNNVTFRRAKFESKVSFTISIFKENARFIKTEFLAKCNNHKIIENNFSETIFYNKTNFYKAKIVSKIDFKISRFKGEIRFVETKFLSKLDNEIANNFREVVFEDKVYFNKTKINTQINFKMAKFKNNVEFVNLHNNVSFNNVNFKGIVNFENLNINTLNFKNVIFNNIVSFDNIRFDNNCKPNFENCTFSDQFNIEHKYIEYKFDEIEKTQEYDKLLNYRDLFRKLKSNRIAHHNLIDASELRAQELYARELELKHKENKSLKEKIERWQLVFYRKLCDHHTDLLLNLKWLVVVIGLFALLYFASRMIQDISLLKALNQYGVCLSIVGVFNLLCLYWFGCIKKFDFFVYLNLIVVLWVICYMPKIIFGIVNIIGDKSYNGFENALITIYTILLALVLFSLQKTARKNSIVPS
>NZ_CP017229.1|WP_002878197.1|56714_59456_+|hypothetical-protein
MKYKWIVKNAYINFKLNNLYMLINPSHKIYLKKDMCYCFEIYIKYRIFNNCILVCDMLDNWWKLISSTLHLDKSHIKYNYLSNTFIVSDFELGIKLESNLLTKFNFEFYNGLILNQLSITNGLSLKRENYNKSLKFSNCKFNKEFCIARINISKQIVFENIYFLENVFIEWVNFNENSCLRFFKCNFKKQCNFKYNIFYNEIDFLDIYAKELILEQNIFNKFLYIQNSTINNINLWKNKFKNRCYFMDSVFGNKNNENIKLNFSNAHFEDNAYFNNSEFYSYADFHECEFDDIACFYGVKFYKAPNFSACYFKEPKAVNLINVDIDKLDFKSVEKYIEDNYKDESYKNETKGIQDEKEIFKIQNEYRLRYAKNLKDSFRVIKDVLITQNNTLEAQEWHKLELYAKEKELEIQLSKNKNDNLKKESKNQVYNPKDYEKINSSRLKTLKSKLMPLIFYSLLPMAHTLFLPFYLFCTIFIIIKIITKILIKISKLFYYFYISFRPLEWNKFIIFWKVKFNHCIKKLMTFGRKMLDFTLWFDCILLQVYRNTSNHHTNFLKILNFTILMISSYAIFGLLFLNNMDFILSFGPMTIAAMNYIVLLMLLIIFISLTRQLYQHGAILLFLIYGLFIISIVSFLSPIYIPAFYFLIYFVGILISYLLFICKIKLFVFISRLFAYICLIGVVILKPQLINPFVGIFSSDKLYESKFEKRLNDLNTSAIINLASILQNDFNLHLKDQNISFTELNSAKALIIANKEKLKEILSKVYNDKYVSDYKKVLNELENNTSNVKNIIEEIDNKNNNSVVSAQLNKFLKLNFNQEIDILYAIKSNFSISEKLSPEQMALFDQKDSQDKLKSVLALLKFKSSFEGILKIINQDEITENTIKSTGVLYGIILLLCIFSLQKTARKNSIVPS
>NZ_CP017229.1|WP_088868012.1|53008_56713_+|Eco57I-restriction-modification-methylase-domain-containing-protein
MKFEAINEKEFLNPYHRKKPILETELNEFIKTLKDYKINLENNLKNNEDSLVANALSKFFENLSFQCEVKSIHKGNSGIDLALKKDGLTQVIIEAKLPHSREFFSPSKPNCKALHECILYYLRERKALNSSLKHIIITDFYSFFIFKADLFEELFNKNKYFKEAFENFESKNSLFKGNTDEIYKEFEKILNGDSTLKGLFVDLKPILEQDKLSFSKLKPLFKIFSKDCLLGEFNPNDANSLNNAFYKELLYILGLCESKQNSKLIIAKSEESKEEQGTFYTAINSKLKEENFETILKLLILWLNRILFLKLIESNLVRFNDDKNLKFLNFKKIPDFDKLSELFFEVLAKEKSTRKKSEFAYLPYLNSSLFEKQSIENTLEISSLSNDLKLFYYKNTVLKDDKCKAKKGQVGLLEYLFEFLDSFDFGSDDEQSEILSQKELINSSVLGNVFEKLNGYKEGSFYTPSFITSYMCKESITKVVLDKFNAQFDLDAKDISELRKSLRKEDKKAQKELLNSIKICDPAVGSGHFLVSALNVMLSIYDELNLFDEEFYLEVQNDEILITGRKGEFIEYKRPKTPKDKAHLIQQELFHTKKDIIENNLFGVDINPNSCEITKLRLWIELLKHSFYQSFDDGNYHDLKTLPNIDINIKCGNSLVSYFETGKSLSHYPNIKERMGKYKRIVKDYKEGFYTDKSHINQEIKNLKISFKNFCFADKFKKEMKSFNDKCEKYSKKYGNFLAVDDENLKFFVSANLTLFDFDEKEATKEFANLKKEYDNIFNLESNHPFEWRFEFPEILDDDGNFKGFDLIIGNPPYIKENDNKDLFTNTKKLRTYQGKMDIWYHFVGRGFDILKNNGYLAFIATNNWVTNSGAKKLRNIVLEESQILSLVDFSSFMVFDSASIQTMIMQFQKIKPPKNYEFHFAKITTQTPIYEDVINLLKNEKTQNNEILSINLTPKKFIDKTLNFTKSDYEELFNKIQKYGKFYLEESEVAQGIVPAIDEAFVIKDKNVFSKNEQCFIKEYYTGLSGKFYSSFTDKYLIYLSNKNYSGNLDDLPNLKQHFQKYKEILKESKIKYKTPNKPYFYLHREREEKFFKKGEEKIISQVRCIEPIFVYSNENFYGSRALFFIQTCRINLKYLTGVLNSKLIAFWLKHKGKIQGNLFKIDKEPLLNIPVVNINSKNEKLANKLISLVDEILKVKEQDKNANTQELENKINSLVYKLYNLTEEEIKIIEGR
>NZ_CP017229.1|WP_002805290.1|70580_71465_+|flagellar-basal-body-rod-modification-protein
MISSSDWNLNTTATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNATLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQKLSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYDSNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTYPIEGVVFKDGVAYAKMAGQEVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSDGDSSGSGSTEDGDKEEKA
>NZ_CP017229.1|WP_002857760.1|71468_73106_+|flagellar-hook-protein-FlgE
MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGGYGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLVDSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGAIKVPVNMYLPPQVTQNVKWSGSLNTNTTTEVVKVDLDPSKFNITKTEDGKYVVSGSVSKEDVFSAKAGDRIILNFTDDNGVKTSFEATLDENLNFKSNELDLKGLDENSIKLDTAQISTEQQKANKDILESPIYNADGSKSTLRVTLERVLPQEGDNIQYKAIAQIYDSNGNAVGNPTEGNMVFDKNGALLQNNITSIANPNGGTINIDLGSPYDANKPGSGYSGIYIKEGVEKNVVTQQDGIAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATANSGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR
>NZ_CP017229.1|WP_002911175.1|73109_74981_-|DUF342-domain-containing-protein
MNFQVKTLETFNPFESLNHEQANTEQILDFRVIDFKLLCSSVKPAKTKTYERKDFDLFYADDFFVKNYNTIVQKFLIEIYPKTQSFPFTVKLRSNSNLTHLKASINLTENFKYYPNLKFDILQNIYKIMIKQKFLILRLDKNLFDKIDDFILSIQKSPSIKEIELEIAKGVDKIEHKSDEIIYHRDVNEECFDENINYDEGNYCKPIEKNELLFEYIYRILGKEGRNLRGEILHLNPIAFLDNPFIIKDESIYTEELEDRIKYFSANYGFLNKDHTGYCITNNLKLSQIGLKTTGSIKTNTDENINLEITNFDISDDAIKSGIVNVQASNIKVNGNVGATKLYGKNISIKGLTHAKSEIFAQDIFITTHKGTLQADTVYIKNLENGTIIAKNVFVENCMGGKIEAENIYICNLLTDNTLYPRKNLIITNNIKFKNNIVVSPLVSIENNSDTECENLKNLSLKIKSKLDDTISKMQNYYDYLIKNQIKIIKLQKTKNPSAIEMKFSNLYHDIIKKYNYLSISYKKLIKLKYQIDAKLNFLNEMVYNVKIYIKAENIGEDNFLKFYPNTNTNLELKHHINLKDYEKVLYLEKGQQVSYIKSSHNYSESDIEEIKIIFEKLEKDNS
>NZ_CP017229.1|WP_002857739.1|74981_75701_-|bacteriohemerythrin
MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIKIHFKDEEKFMESIDFPLIEEHKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDHFANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRAEKTHDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNATFEDALQNHHFTTQKNDMGGG
>NZ_CP017229.1|WP_002857729.1|76208_76358_+|hypothetical-protein
MEDNSWHFLGLFIAVIMAVILQVMPLGPVCMIAIAIVALSGITTTQLKI
>NZ_CP017229.1|WP_002857775.1|76580_76925_+|anion-permease
MALGVIKTGLGEHLAYHFISILGKKTLGIAYSIAFCETILAPVTPSNTARAGAIINPIVQVIARSFKSTPEDGTQNKIGTYLSLVNYQEPILFHQLCLLQLQLQILWCFIFSLR
>NZ_CP017229.1|WP_002869943.1|76867_77083_+|anion-permease
MFITATAPNPLVLYFLSPLEIKSTPNASTFTKDKLKELVKMKNSEKIMLSVFVSLLLLWAGALGLFFWNFS
>NZ_CP017229.1|WP_002868357.1|76997_77261_+|anion-permease
MKKSCSVFLSRFYFYGLELWACFFGISLDATSVALLGLSLVLISGVLTFGEVLAEKAAWNTLVWFSALVMMATLLGKLGVTQFLAEA
>NZ_CP017229.1|WP_002851683.1|77376_77628_+|anion-permease
MFFVFLVQLALGAPPLLYAFIMIASGNVMMALTHYAIGTAPVIFGTGCVTLKKWWSIGFVISIVDIVVMIAVGLIWWKILGFY
>NZ_CP017229.1|WP_002851977.1|77655_78672_-|tRNA-2-thiouridine(34)-synthase-MnmA
MKILVAMSGGVDSTVTAYKLKNLGHEVIGCYMKLHGKPNYHEENIKKVEKVANFLQIPYHILDLQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEFAKSLGCEKLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKKEDVKKFASTIEVLKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGEVLDSSGKVVGKHEGYMHYTIGKRRGFEVRGAHEPHFVLKINPKQNQIIVGTKEELKISEFNLKNINLFIDAKELDCEVKIRYRSKSTPCKVEIYEDKSAKIILKDPVYGLASGQMAVFYDHDKVIASGFIE

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Crispr_ID: NZ_CP017229_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017229_2

1327918-1327997

Orphan

Consensus_repeat	Method
TCTTTTTGTTCTTTTAAAGCTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017229_2

>merge|NZ_CP017229|2|1327918-1327997|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTCTTTTTTAGCTTTATACTCAGCCTTACTCATATAATCTTTTTGTTCTTTTAAAGCATC

>NZ_CP017229|2|1|1327918-1327997|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTC	TTTTTTAGCTTTATACTCAGCCTTACTCATATAA
TCTTTTTGTTCTTTTAAAGCATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017229.1\|WP_002855724.1\|1333644_1334829_-\|capsule-polysaccharide-modification-protein-KpsS	unknown	unknown	gnl\|CDD\|226092
NZ_CP017229.1\|WP_002780456.1\|1323185_1324010_-\|enoyl-ACP-reductase-FabI	unknown	unknown	gnl\|CDD\|181416
NZ_CP017229.1\|WP_002780453.1\|1325886_1326885_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223135
NZ_CP017229.1\|WP_002856648.1\|1330328_1330676_+\|holo-ACP-synthase	unknown	unknown	gnl\|CDD\|223807
NZ_CP017229.1\|WP_002855528.1\|1324013_1324685_-\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
NZ_CP017229.1\|WP_002855922.1\|1321688_1323182_-\|hydrogenase-small-subunit	unknown	unknown	gnl\|CDD\|224654
NZ_CP017229.1\|WP_002855429.1\|1329791_1330328_+\|flagellar-basal-body-associated-protein-FliL	unknown	unknown	gnl\|CDD\|181433
NZ_CP017229.1\|WP_002855324.1\|1324681_1325884_-\|phosphoglycerate-kinase	unknown	unknown	gnl\|CDD\|234613
NZ_CP017229.1\|WP_002779147.1\|1319629_1319854_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|224830
NZ_CP017229.1\|WP_002856001.1\|1319850_1321692_+\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NZ_CP017229.1\|WP_002855470.1\|1326944_1327490_+\|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|223985
NZ_CP017229.1\|WP_002780440.1\|1330676_1331096_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017229.1\|WP_002855668.1\|1336920_1337433_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|235498
NZ_CP017229.1\|WP_002856070.1\|1334857_1336924_-\|capsular-polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|226093
NZ_CP017229.1\|WP_002855912.1\|1328299_1329670_-\|phosphoglucosamine-mutase-PgmL	unknown	unknown	gnl\|CDD\|100091
NZ_CP017229.1\|WP_002856271.1\|1337422_1338184_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|224134
NZ_CP017229.1\|WP_002855354.1\|1318207_1319548_+\|MmgE/PrpD-family-protein	unknown	unknown	gnl\|CDD\|377179
NZ_CP017229.1\|WP_002855339.1\|1327517_1327844_+\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|223870
NZ_CP017229.1\|WP_002855843.1\|1331092_1332454_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP017229.1\|WP_002855346.1\|1332450_1333572_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP017229.1\|WP_002855724.1\|1333644_1334829_-\|capsule-polysaccharide-modification-protein-KpsS	gnl\|CDD\|226092	COG3562, KpsS, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP017229.1\|WP_002780456.1\|1323185_1324010_-\|enoyl-ACP-reductase-FabI	gnl\|CDD\|181416	PRK08415, PRK08415, enoyl-[acyl-carrier-protein] reductase FabI.	0
NZ_CP017229.1\|WP_002780453.1\|1325886_1326885_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	2.96117e-168
NZ_CP017229.1\|WP_002856648.1\|1330328_1330676_+\|holo-ACP-synthase	gnl\|CDD\|223807	COG0736, AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism].	9.23009e-40
NZ_CP017229.1\|WP_002855528.1\|1324013_1324685_-\|triose-phosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	2.79646e-86
NZ_CP017229.1\|WP_002855922.1\|1321688_1323182_-\|hydrogenase-small-subunit	gnl\|CDD\|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	4.22221e-157
NZ_CP017229.1\|WP_002855429.1\|1329791_1330328_+\|flagellar-basal-body-associated-protein-FliL	gnl\|CDD\|181433	PRK08455, fliL, flagellar basal body-associated protein FliL; Reviewed.	2.19231e-91
NZ_CP017229.1\|WP_002855324.1\|1324681_1325884_-\|phosphoglycerate-kinase	gnl\|CDD\|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_CP017229.1\|WP_002779147.1\|1319629_1319854_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|224830	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism].	1.69416e-22
NZ_CP017229.1\|WP_002856001.1\|1319850_1321692_+\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP017229.1\|WP_002855470.1\|1326944_1327490_+\|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	gnl\|CDD\|223985	COG1057, NadD, Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism].	3.16494e-57
NZ_CP017229.1\|WP_002855668.1\|1336920_1337433_-\|adenylyl-sulfate-kinase	gnl\|CDD\|235498	PRK05541, PRK05541, adenylylsulfate kinase; Provisional.	1.95617e-101
NZ_CP017229.1\|WP_002856070.1\|1334857_1336924_-\|capsular-polysaccharide-biosynthesis-protein	gnl\|CDD\|226093	COG3563, KpsC, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP017229.1\|WP_002855912.1\|1328299_1329670_-\|phosphoglucosamine-mutase-PgmL	gnl\|CDD\|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP017229.1\|WP_002856271.1\|1337422_1338184_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|224134	COG1213, COG1213, Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane].	1.06919e-74
NZ_CP017229.1\|WP_002855354.1\|1318207_1319548_+\|MmgE/PrpD-family-protein	gnl\|CDD\|377179	pfam03972, MmgE_PrpD, MmgE/PrpD family. This family includes 2-methylcitrate dehydratase EC:4.2.1.79 (PrpD) that is required for propionate catabolism. It catalyzes the third step of the 2-methylcitric acid cycle.	6.39541e-118
NZ_CP017229.1\|WP_002855339.1\|1327517_1327844_+\|ribosome-silencing-factor	gnl\|CDD\|223870	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown].	8.97235e-38
NZ_CP017229.1\|WP_002855843.1\|1331092_1332454_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.90715e-78

>NZ_CP017229.1|WP_002855339.1|1327517_1327844_+|ribosome-silencing-factor
MQERIDLIVKILDEKKAEDIKTIDMSEQEYFVKYVIIAATLGERHALSLIDELKTQLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLENLKKGRV
>NZ_CP017229.1|WP_002855470.1|1326944_1327490_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase
MKIALFGGSFDPPHNGHNSVILEALEKLDIDKLIIMPTYINPFKQNFSADEKQRFLWVKKLWGHFPKVEICDFETKQKRPVPSIESVKYLYKLYNPSKFYLLIGADHLEKLHLWHDFEKLNSLVEFVIANRNDIEIPKNFKDLKTDKKIASSFIRNTLNTNEVCEEIKDEVKKYYEKLQKN
>NZ_CP017229.1|WP_002780453.1|1325886_1326885_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYLFKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLTMAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCRVLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVMPELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAAATNLKGILMVDDDERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA
>NZ_CP017229.1|WP_002855324.1|1324681_1325884_-|phosphoglycerate-kinase
MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIVMAKDVIGEDAKTKAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVKALRSKENE
>NZ_CP017229.1|WP_002855528.1|1324013_1324685_-|triose-phosphate-isomerase
MIFAANLKCNHTRASFKIYAKILNKTMGVKCDDIIVFPPSIAFLENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKFDFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEIIDLNYEKLIIAYEPIYSIGTGVSAQSTDIAKVLEFLASLTKVPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFIKLIKG
>NZ_CP017229.1|WP_002780456.1|1323185_1324010_-|enoyl-ACP-reductase-FabI
MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALKKRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENSFLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVAKAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNVSIEDVGNSAMYLLSDLANGVTGEIHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG
>NZ_CP017229.1|WP_002855922.1|1321688_1323182_-|hydrogenase-small-subunit
MAKLSNEELKNILEDRIKKLENSTLKEDKVINEESVKILARHLSLGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHETLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKAKAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDINIIATLSFFALFGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKIGCKGPYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEELKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYTFIEQNFDENPMPLKDFWKYLEISFILVKGEFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAEKPKLDVSKSFRMTLIYLCGGLDFEGIAYSILKAFEDNITKISSLKAS
>NZ_CP017229.1|WP_002856001.1|1319850_1321692_+|ferrous-iron-transport-protein-B
MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAKTFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSAELLSLNKKMLLALNMCDEAKKEGIELDTSILSQEFQSQVVEISAKTKENLELLLQKIIILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIHKFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNALGEFVKNNISNTFIASALADGIIAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGIYILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWYLVWFMVYNKAKMYLKKAGTFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKSIEPIFQPLGLDWKLSVSLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIYNPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLHIAKILLN
>NZ_CP017229.1|WP_002779147.1|1319629_1319854_+|ferrous-iron-transport-protein-A
MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSSLKNATIMVELDTSCVILRSDEAKTIEVNLI
>NZ_CP017229.1|WP_002855354.1|1318207_1319548_+|MmgE/PrpD-family-protein
MFYSEILADFIFNLKYENIPNAVVQRAKELMLDSLGTAIAASKEECVLNAFKAFENLSTEKNTPIWINDQKLDPIYAAMLDGIASHALDFDDTHTEAILHASAILTPLCLSYGFHVSKDAKKIIKAFIIGWEIAARVGIASKGTFHKRGFHTTAIAGIFGSVSASAILLDLNKEQIINALGLAGSFASGVNEFLSNGSNSKVLHIANAIKNGIMVAHFAKNNMSGPLSIFEGRDNIFKCFGIEEECDKTELNKALGEIWQTMQVSIKPYPSCHFAHGLIDCAIALKNDGLKADEIKSIHCFVDEVPISFICDPLEAKYTPNSAYEAKFSMPFLMALGFFDGKITLNSYENLKREEVLEFAKKISYEKRKSQGFPKYFPGHLEASLQDGHIIQKDVFINKGNFDNPLSFEELKAKFLANAQIYLDNAKANKILDQIINLENLNHFSF
>NZ_CP017229.1|WP_002855912.1|1328299_1329670_-|phosphoglucosamine-mutase-PgmL
MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVSVGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSHNPKDYNGFKITINKESFFGVELKEFSKEVYKHLDDEIEENLEVEKYDILSLYVKFMCEQFSFLKDFNYKFGVDCTNGAAGVVIELLIKALNLKAHVMFSEPDGQFPNHAPDPTEEENLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTHVFCGDELCYLFAKNIPNPRILGEVKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDGIYAFLRVLELVYKGFDLESMIKALPKLYTTPEIKIPVNEEEKFKLVEEFQKEIEKGALKGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESTVFSLFNEIKARLKN
>NZ_CP017229.1|WP_002855429.1|1329791_1330328_+|flagellar-basal-body-associated-protein-FliL
MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSSSSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVKCTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINEILTDGFIKNVYFTDFVVS
>NZ_CP017229.1|WP_002856648.1|1330328_1330676_+|holo-ACP-synthase
MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLAGLWAAKEAASKALGVGICELCNFFDIEISKDERNAPKLKYSQKITKDFNITQTSLSISHDNGFAIAIVAVV
>NZ_CP017229.1|WP_002780440.1|1330676_1331096_-|hypothetical-protein
MKRVRTKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLGYLFIVIIGIFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVIKITDFFQKDHCKRANKREQPVVDFILSRNLDKQTIGK
>NZ_CP017229.1|WP_002855843.1|1331092_1332454_-|cytochrome-P450
MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYVKMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRELLRPSFEMTRINKVFNLMSEAVADMMDRFNKYPNHAIIEVDEAMTFITADVIFRTIMSSKLDEEKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDCKRAKAGDVIRQVLSDIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSLTWTLYLLSLYPKEQEKAYEEIIQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFFAREAKKDTQVRDKLIKKGSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPFGVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSKRKL
>NZ_CP017229.1|WP_002855346.1|1332450_1333572_-|hypothetical-protein
MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHAFNIKTDLNKIEKNEQFPFFQISCEGVETKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIKFGKESIYQLITGYYPFFYVLFSLLFSLVLAFGSFAFLQNYMHFSLAIIIGCFLGFLLNHFLFKLGKKLAVFWIARICAFCATWQDKKTGIMQERIKLFANTIVDKLKQNESKQDYELILVAHSVGTIVCIEVLECILRQNLDLSLLRKLKILTLGECIPLVSYQKKAGEFRKKLEFVSRFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKIKRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI
>NZ_CP017229.1|WP_002855724.1|1333644_1334829_-|capsule-polysaccharide-modification-protein-KpsS
MKISKKLQQEFTSKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKIDAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKFMAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYIHDTHLPVLLRKALGCITINSTVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLKTTQFNGNFYKNFFLDK
>NZ_CP017229.1|WP_002856070.1|1334857_1336924_-|capsular-polysaccharide-biosynthesis-protein
MKYYSTSKKLIANVGNFYSIFLYKRNLKINKDDLFFGWGRKKSGLKAMNLAKKHKAKFILLEDGFIRSLNLGVENSPSFSMVKDDIGIYYDGTMPSKLENLLNTYEFKDEEIKQAKKAIELIKKYKISKYNNNLDIPDDYFQKDEKRVLIITQTANDASLGFGLAKDFKTVDMIKDAIKENPDSKIYIKIHPDVLSGKKQSDLDINSLPKECILITENFNPIALLEFFDKVYTKTSGMGFEALMQECECICYGMPFYAGWGLTKDKLECKRRMQKRSLEEVFYAAYILYSEYFNPCLNQKSNIFDTIQTLAKYKDIEKVNSNRLFMLGFTLWKRHFIKPFFKAKDNEIIFLNSIKSLVRYKLKEDDKFFIWGKKYDENTLKNLLLTKAKEQNLTNFSPKVSLVEDGFIRSISLGSDLTRPFSLIVDNKGLYIDPNKASKLEELLQNEIFDENILNRAKNIIKILLENRFSKYNGLKHENLKINAKIGQKIILIPAQVEDDASMILGGFGLSTLDLLKEVRAKNQDAYIIFKPHPDVLSGNRVGLKDEKLILEFCDEIVKDCSIDSAIKIADEIHTITSTSGFDALLRAKKVFTYGMPFYAGWGLTKDKHKCERRTRKLSLEELVAGALITYPRYINPKTKILCEIEVCLDIMLNLQKDYFSKSYLKIIIDLRNFLLRRMRRIVENIIK
>NZ_CP017229.1|WP_002855668.1|1336920_1337433_-|adenylyl-sulfate-kinase
MINSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYLDGDELREILGHYAYDRQGRIDMALKRAKFAKFLNDQGMIVIVTTISMFNEIYDYNRKQLKNYYEIYIECDMHELMQRDQKGLYTKALNKEIDNVVGVDIEFDKPEADLVINNSCRNNLEEKVELIIKKLAL
>NZ_CP017229.1|WP_002856271.1|1337422_1338184_-|NTP-transferase-domain-containing-protein
MNAIILAAGFGSRLMPLTKDQPKCMVEYKNKKIIDYEIEALKSAGINEIAVVGGYLNDVLKNYLNKYDIEHFFINSKYDKTNMVHTFFCAKDFMLKCIKEKQDLIVSYADIVYFQDCVQKLINIKEELAIVVDKSWRKLWSKRFANPLEDAETLKMTNGYIIELGKKANAYDEIEAQYIGLFKFSYQFLSEVIAFYEMLDRDILYDNKNFENMYMTSFLQALIEKYNNAKAVEIDGNWCEIDFMSDLEVQIDK

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Crispr_ID: NZ_CP017229_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017229_3

1443968-1444531

TypeII

Consensus_repeat	Method
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRISPRCasFinder
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	PILER-CR

8 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP017229_3

>merge|NZ_CP017229|3|1443968-1444531|CRISPRCasFinder,CRT,PILER-CR
GGGTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATGCATTGCTTTACTACATAGCCAGTCGTGTAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATAGGGGTGATATTGTTATGAGTATTATGAAAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATGCAGAAAATGGAGATAGACAAGATTTTCCTGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTCCATTCTCATAAAATATTTAGCCATTATTGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTATTTGAACGCTTAAAATCAAGAAAATATTGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATAAATCGTCGAGCTAAAACAATAGCACGAGAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATATATTATATTAGAATTTAGAAGTTATTTCAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATGATGAAGATGAAGTTGAAGCTAAACAAGATGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP017229|3|2|1443968-1444531|CRISPRCasFinder
GGGTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GCATTGCTTTACTACATAGCCAGTCGTGTA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AGGGGTGATATTGTTATGAGTATTATGAAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GCAGAAAATGGAGATAGACAAGATTTTCCT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TCCATTCTCATAAAATATTTAGCCATTATT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TATTTGAACGCTTAAAATCAAGAAAATATT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AAATCGTCGAGCTAAAACAATAGCACGAGA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	ATATTATATTAGAATTTAGAAGTTATTTCA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GATGAAGATGAAGTTGAAGCTAAACAAGAT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP017229|3|1|1443968-1444531|CRT
GGGTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GCATTGCTTTACTACATAGCCAGTCGTGTA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AGGGGTGATATTGTTATGAGTATTATGAAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GCAGAAAATGGAGATAGACAAGATTTTCCT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TCCATTCTCATAAAATATTTAGCCATTATT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TATTTGAACGCTTAAAATCAAGAAAATATT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AAATCGTCGAGCTAAAACAATAGCACGAGA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	ATATTATATTAGAATTTAGAAGTTATTTCA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GATGAAGATGAAGTTGAAGCTAAACAAGAT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP017229|3|2|1444034-1444531|PILER-CR
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AGGGGTGATATTGTTATGAGTATTATGAAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GCAGAAAATGGAGATAGACAAGATTTTCCT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TCCATTCTCATAAAATATTTAGCCATTATT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TATTTGAACGCTTAAAATCAAGAAAATATT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AAATCGTCGAGCTAAAACAATAGCACGAGA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	ATATTATATTAGAATTTAGAAGTTATTTCA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GATGAAGATGAAGTTGAAGCTAAACAAGAT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017229.1\|WP_002855524.1\|1453718_1454756_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224292
NZ_CP017229.1\|WP_071616136.1\|1449358_1450594_+\|C4-dicarboxylate-transporter-DcuC	unknown	unknown	gnl\|CDD\|225611
NZ_CP017229.1\|WP_002855427.1\|1450614_1451604_-\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
NZ_CP017229.1\|WP_002855997.1\|1452266_1453016_+\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP017229.1\|WP_002856561.1\|1441991_1442213_+\|MoaD/ThiS-family-protein	unknown	unknown	gnl\|CDD\|224888
NZ_CP017229.1\|WP_002855660.1\|1440448_1441990_+\|multicopper-oxidase-CueO	unknown	unknown	gnl\|CDD\|225043
NZ_CP017229.1\|WP_002855819.1\|1439175_1440324_-\|carboxynorspermidine-decarboxylase	unknown	unknown	gnl\|CDD\|273414
NZ_CP017229.1\|WP_002855824.1\|1433621_1434554_-\|formate-dehydrogenase-subunit-gamma	unknown	unknown	gnl\|CDD\|130645
NZ_CP017229.1\|WP_002851264.1\|1434550_1435192_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|319893
NZ_CP017229.1\|WP_002856438.1\|1442213_1442660_+\|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl\|CDD\|223391
NZ_CP017229.1\|WP_002851537.1\|1437992_1438184_-\|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl\|CDD\|236534
NZ_CP017229.1\|WP_002780989.1\|1445100_1445991_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP017229.1\|WP_171770385.1\|1444676_1445090_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP017229.1\|WP_002856551.1\|1452990_1453722_+\|glucosaminidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|225539
NZ_CP017229.1\|WP_002855730.1\|1442663_1443854_+\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|223380
NZ_CP017229.1\|WP_002851546.1\|1454820_1455270_-\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854
NZ_CP017229.1\|WP_012006785.1\|1438158_1438872_-\|molecular-chaperone-TorD-family-protein	unknown	unknown	gnl\|CDD\|225916
NZ_CP017229.1\|WP_002855697.1\|1445987_1448942_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP017229.1\|WP_002856113.1\|1451664_1452270_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP017229.1\|WP_022552433.1\|1435188_1437993_-\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|239153

Protein	Function_ID	Function_description	E-value
NZ_CP017229.1\|WP_002855524.1\|1453718_1454756_-\|ATP-binding-protein	gnl\|CDD\|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.6328e-34
NZ_CP017229.1\|WP_071616136.1\|1449358_1450594_+\|C4-dicarboxylate-transporter-DcuC	gnl\|CDD\|225611	COG3069, DcuC, C4-dicarboxylate transporter [Energy production and conversion].	6.98481e-62
NZ_CP017229.1\|WP_002855427.1\|1450614_1451604_-\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP017229.1\|WP_002855997.1\|1452266_1453016_+\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	4.75008e-93
NZ_CP017229.1\|WP_002856561.1\|1441991_1442213_+\|MoaD/ThiS-family-protein	gnl\|CDD\|224888	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism].	6.20963e-11
NZ_CP017229.1\|WP_002855660.1\|1440448_1441990_+\|multicopper-oxidase-CueO	gnl\|CDD\|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	5.51224e-118
NZ_CP017229.1\|WP_002855819.1\|1439175_1440324_-\|carboxynorspermidine-decarboxylase	gnl\|CDD\|273414	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase. This protein is related to diaminopimelate decarboxylase. It is the last enzyme in norspermidine biosynthesis by an unusual pathway shown in Vibrio alginolyticus. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP017229.1\|WP_002855824.1\|1433621_1434554_-\|formate-dehydrogenase-subunit-gamma	gnl\|CDD\|130645	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit. This model represents the gamma chain of the gamma proteobacteria (and Aquifex aolicus) formate dehydrogenase. This subunit is integral to the cytoplasmic membrane, consisting of 4 transmembrane helices, and receives electrons from the beta subunit. The entire E. coli formate dehydrogenase N (nitrate-inducible form) has been crystallized. The gamma subunit contains two cytochromes, heme b(P) and heme b(C) near the periplasmic and cytoplasmic sides of the membrane respectively. The electron acceptor quinone binds at the cytoplasmic heme histidine ligand. NiFe-hydrogenase and thiosulfate reductase contain homologous gamma subunits, and these can be found scoring in the noise of this model. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	4.52433e-86
NZ_CP017229.1\|WP_002851264.1\|1434550_1435192_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|319893	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	6.18245e-57
NZ_CP017229.1\|WP_002856438.1\|1442213_1442660_+\|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl\|CDD\|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	5.17534e-42
NZ_CP017229.1\|WP_002851537.1\|1437992_1438184_-\|twin-arginine-translocation-signal-domain-containing-protein	gnl\|CDD\|236534	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional.	0.00441722
NZ_CP017229.1\|WP_002780989.1\|1445100_1445991_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	3.70973e-121
NZ_CP017229.1\|WP_171770385.1\|1444676_1445090_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.3054e-55
NZ_CP017229.1\|WP_002856551.1\|1452990_1453722_+\|glucosaminidase-domain-containing-protein	gnl\|CDD\|225539	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only].	8.6877e-99
NZ_CP017229.1\|WP_002855730.1\|1442663_1443854_+\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|223380	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism].	1.43135e-142
NZ_CP017229.1\|WP_002851546.1\|1454820_1455270_-\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.92874e-51
NZ_CP017229.1\|WP_012006785.1\|1438158_1438872_-\|molecular-chaperone-TorD-family-protein	gnl\|CDD\|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	0.000581315
NZ_CP017229.1\|WP_002855697.1\|1445987_1448942_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP017229.1\|WP_002856113.1\|1451664_1452270_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	8.14455e-71
NZ_CP017229.1\|WP_022552433.1\|1435188_1437993_-\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|239153	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. Members of the MopB_Formate-Dh-Na-like CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0

>NZ_CP017229.1|WP_002855730.1|1442663_1443854_+|molybdopterin-molybdotransferase-MoeA
MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKNQPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSDTLVPIENVRVENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTRLNYSEIALLAELGFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFPLLKDDEKATFSTLESALQSCDILVTTGGVSMGDFDFLKKAVKEYEIIIDKADIKPGRHIKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTPYLEFVACNIEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEMLENESLVDIIFMP
>NZ_CP017229.1|WP_002856438.1|1442213_1442660_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MEHFTLYQDSLDIPKIYSQWYEFAKDKNCGALLTFCGIVREEGGIEALSFDIYEPLLKKWFNEWQKRVDFDGITLLFAHSIGDVAVHESSYFAGILSKQRKLGLKLLNEFVEDFKASAPIWKYDVINKERIYTKERSTKLCGAGLLKG
>NZ_CP017229.1|WP_002856561.1|1441991_1442213_+|MoaD/ThiS-family-protein
MVKVEFLGPINKDNLELEVKNLKELKEILQKDESLKEWLELCAVSLNDEIIFDENTKLKTGDKIALLPPVCGG
>NZ_CP017229.1|WP_002855660.1|1440448_1441990_+|multicopper-oxidase-CueO
MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTSFINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKTLFYTYNGLVPAPKIQVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNTTAARYLNLRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKKLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSESELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVCPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE
>NZ_CP017229.1|WP_002855819.1|1439175_1440324_-|carboxynorspermidine-decarboxylase
MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCEESADALEAVLKVFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKENEFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLDHKNELQMIREFSYKDYSLRN
>NZ_CP017229.1|WP_012006785.1|1438158_1438872_-|molecular-chaperone-TorD-family-protein
MEALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDEFLGDVFMNKNANLYKEIASIAMAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS
>NZ_CP017229.1|WP_002851537.1|1437992_1438184_-|twin-arginine-translocation-signal-domain-containing-protein
MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKKKEVLFQRSANWENYYIKAE
>NZ_CP017229.1|WP_022552433.1|1435188_1437993_-|formate-dehydrogenase-subunit-alpha
MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELKEAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMVRSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKMSNEQAYYVRKFAAFFGTNNVDHQARIUHSATVAGVANTFGYGAMTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREEAAKWTAEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQQVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQWRFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRSIGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQEKEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHFTGVMQGVDLTHNFPKGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK
>NZ_CP017229.1|WP_002851264.1|1434550_1435192_-|4Fe-4S-dicluster-domain-containing-protein
MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIRRRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVPVCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL
>NZ_CP017229.1|WP_002855824.1|1433621_1434554_-|formate-dehydrogenase-subunit-gamma
MRKVFVTLLLSVASLFAYGSERMGQDTQIWDFHRITNIPNYDTFGKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHFIAAISWVILVPTGFVMMFGATFGGGLFVRVCKNLHAFATVLFIISIIPMFLWWIKRMLPASYDIRWMMIVGGYLSKVKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDFNSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYKEEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI
>NZ_CP017229.1|WP_171770385.1|1444676_1445090_-|CRISPR-associated-endonuclease-Cas2
MRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFSVYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNETNLTLFDIDSHGEFKYKNSNNEEIQLNKKQEKYHQQNLFEF
>NZ_CP017229.1|WP_002780989.1|1445100_1445991_-|type-II-CRISPR-associated-endonuclease-Cas1
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSLSSALFNAFARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFVLKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGVSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGESEFLSKDDKRALISNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
>NZ_CP017229.1|WP_002855697.1|1445987_1448942_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MARILAFDIGISSIGWAFSENDELKDCGVRIFTKVENPKTGESLALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPYELRFRALNELLSKQDFARVILHIAKRRGYDDIKNSDDKEKGAILKAIKQNEEKLANYQSVGEYLYKEYFQKFKENSKEFTNVRNKKESYERCIAQSFLKDELKLIFKKQREFGFSFLKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLNNLKNTEGILYTKDDLNALLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKKYKEFIKALGEHNLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKDHLNISFKALKLITPLMLEGKKYDEAYNELNLKVAINEDKKDFLPAFNETYYKDEVTNPVVLRAIKEYRKVLNALLKKYGKVHKINIELAREVGKNHSQRAKIEKEQNENYKAKKDAELECEKLGLKINSKNILKLRLFKEQKEFCAYSGEKIKISDLQDEKMLEIDHIYPYSRSFDDSYMNKVLVFTKQNQEKLNQTPFEAFGNDSAKWQKIEVLAKNLPTKKQKRILDKNYKDKEQKDFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAKSGMLTSALRHTWGFSAKDRNNHLHHAIDAVIIAYANNSIVKAFSDFKKEQESNSAELYAKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEFYQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFALKVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPELVYFNAFTSSTVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVTKAEFRQREDFKK
>NZ_CP017229.1|WP_071616136.1|1449358_1450594_+|C4-dicarboxylate-transporter-DcuC
MFKSQLSGVGLIIMSVAGFAAYMKHINASAKLAFLANKPLGKIKNKYLILSGTFVVGMALKIVISSYAGLLLLLLACIYPVLISLKIRPITAVCVLSLIALDYGPKDGNSINMADMVGQSDNVVGLFLNYQIYSVIAYVVVIAILIPFYFAWIDKRDKEKGVLNDEVEIPQIIDPKCPTFYILFPWLPVVFLFTAYFFTIKLDVVTANFVSISLVFLVEFARHRNARKLGEDMMVILKAMAEIFISVVSIIIAAGVFAEGIKALGGVNILANAVSNLGTGNFAWFGILLSIAILSFLVYFATVIMGSGIAAFNAFGKLAPDIATKLDVAPITLVLPIEIASCLGRAASPIAGGIIALAGFAKVAPMDIIKRTTPLLLIAMLVNVLVAFYLAQTNPLPKEQNTTKIELKIQK
>NZ_CP017229.1|WP_002855427.1|1450614_1451604_-|phosphoribosylformylglycinamidine-cyclo-ligase
MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDNVVGGIGSFAGAFRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFLDYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMAEEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDILLEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYTIGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE
>NZ_CP017229.1|WP_002856113.1|1451664_1452270_+|dephospho-CoA-kinase
MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHEILDENALELEKIFSPFSLKNLLTKEKKIDRKILGKIVFNNKEAKKTLENFTHPKIRAKILEQMQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLDSQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGKM
>NZ_CP017229.1|WP_002855997.1|1452266_1453016_+|diaminopimelate-epimerase
MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFIVILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGVIKAKVNQDKVEVSLGKIKSVQNTFEELGKTWQLCNTGVPHLVHFCQNLDEFDTMLCQKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPKSGEEVGFAYKNEELFFEGKVKYCFEANYNFS
>NZ_CP017229.1|WP_002856551.1|1452990_1453722_+|glucosaminidase-domain-containing-protein
MKPIIIFLSLFLIPLFADDLKSGFGEEYYKLDIDQKRQIFFIKMNEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLIMIKNKYRIENLYDFAEYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHKIKIFDSLQDSVYSYVLNLNRHFAYEKFRDARAKFASEGKEITGLEAIKTLDSYSERKGYYINLITKIIKRYNLEKYDTNSNNT
>NZ_CP017229.1|WP_002855524.1|1453718_1454756_-|ATP-binding-protein
MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIFNFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKINIPIILSTNIKDLNVNGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKNILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYVIYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDSFFEQGVKFEVISFDKFSLGF
>NZ_CP017229.1|WP_002851546.1|1454820_1455270_-|DNA-starvation/stationary-phase-protection-protein
MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017229_3	3.3\|1444136\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444136-1444165	30	MN530981	Campylobacter phage DA10, complete genome	1266-1295	0	1.0
NZ_CP017229_3	3.2\|1444070\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444070-1444099	30	MN530981	Campylobacter phage DA10, complete genome	11419-11448	1	0.967
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	MN530981	Campylobacter phage DA10, complete genome	16839-16868	2	0.933
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	MN530981	Campylobacter phage DA10, complete genome	14720-14749	2	0.933
NZ_CP017229_3	3.4\|1444202\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444202-1444231	30	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	837-866	4	0.867
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	MT774375	CrAssphage cr50_1, complete genome	18825-18854	4	0.867
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	MN694729	Marine virus AFVG_250M1111, complete genome	14316-14345	4	0.867
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	MN694290	Marine virus AFVG_250M636, complete genome	13008-13037	4	0.867
NZ_CP017229_3	3.7\|1444400\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444400-1444429	30	LC519601	Cronobacter phage vB_CsaP_009 DNA, complete genome	70700-70729	5	0.833
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	AP014312	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S30-C72, * SEQUENCING IN PROGRESS *	1998-2027	5	0.833
NZ_CP017229_3	3.3\|1444136\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444136-1444165	30	NC_012226	Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence	14925-14954	6	0.8
NZ_CP017229_3	3.3\|1444136\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444136-1444165	30	NZ_CP019601	Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence	22956-22985	6	0.8
NZ_CP017229_3	3.5\|1444268\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444268-1444297	30	NZ_CP046714	Nostoc sp. ATCC 53789 plasmid pNsp_k, complete sequence	7687-7716	6	0.8
NZ_CP017229_3	3.7\|1444400\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444400-1444429	30	HG531805	Clostridium phage CDMH1 complete genome	32504-32533	6	0.8
NZ_CP017229_3	3.2\|1444070\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444070-1444099	30	KY971610	Pseudomonas phage PspYZU05, complete genome	126696-126725	7	0.767
NZ_CP017229_3	3.2\|1444070\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444070-1444099	30	KC821622	Cellulophaga phage phi46:3, complete genome	14280-14309	7	0.767
NZ_CP017229_3	3.5\|1444268\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444268-1444297	30	KX119200	Helicobacter phage FrMEG235U, complete genome	2736-2765	7	0.767
NZ_CP017229_3	3.5\|1444268\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444268-1444297	30	KX119201	Helicobacter phage FrANT170U, complete genome	2736-2765	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NC_004041	Rhizobium etli CFN 42 plasmid p42d, complete sequence	265467-265496	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP020898	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence	220584-220613	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP021027	Rhizobium sp. TAL182 plasmid pRetTAL182c, complete sequence	337111-337140	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013633	Rhizobium sp. N324 plasmid pRspN324c, complete sequence	334827-334856	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013555	Rhizobium phaseoli strain N931 plasmid pRphaN931c, complete sequence	349681-349710	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP020950	Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence	368798-368827	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013587	Rhizobium phaseoli strain N161 plasmid pRphaN161b, complete sequence	294556-294585	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013598	Rhizobium sp. N741 plasmid pRspN741c, complete sequence	331831-331860	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013561	Rhizobium phaseoli strain N841 plasmid pRphaN841d, complete sequence	331734-331763	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013578	Rhizobium phaseoli strain N671 plasmid pRphaN671d, complete sequence	352598-352627	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013550	Rhizobium phaseoli strain R611 plasmid pRetR611c, complete sequence	304772-304801	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013530	Rhizobium phaseoli strain R723 plasmid pRphaR723c, complete sequence	320288-320317	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013535	Rhizobium phaseoli strain R650 plasmid pRphaR650c, complete sequence	327891-327920	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013540	Rhizobium phaseoli strain R630 plasmid pRphaR630c, complete sequence	339785-339814	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013544	Rhizobium phaseoli strain R620 plasmid pRphaR620b, complete sequence	270102-270131	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013566	Rhizobium phaseoli strain N831 plasmid pRphaN831c, complete sequence	349394-349423	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013502	Rhizobium esperanzae strain N561 plasmid pRspN561b, complete sequence	331753-331782	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013583	Rhizobium phaseoli strain N261 plasmid pRphaN261c, complete sequence	320288-320317	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013508	Rhizobium sp. N1341 plasmid pRspN1341c, complete sequence	333031-333060	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013519	Rhizobium sp. N113 plasmid pRspN113b, complete sequence	334518-334547	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013572	Rhizobium phaseoli strain N771 plasmid pRphaN671d, complete sequence	352598-352627	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP021125	Rhizobium sp. Kim5 plasmid pRetKim5a, complete sequence	323837-323866	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013492	Rhizobium sp. N6212 plasmid pRspN6212b, complete sequence	337081-337110	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013514	Rhizobium sp. N1314 plasmid pRspN1314c, complete sequence	331737-331766	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013497	Rhizobium sp. N621 plasmid pRspN621b, complete sequence	338281-338310	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013592	Rhizobium sp. N871 plasmid pRspN871b, complete sequence	331753-331782	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	CP007643	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803b, complete sequence	388353-388382	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NC_010996	Rhizobium etli CIAT 652 plasmid pB, complete sequence	327188-327217	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP013604	Rhizobium sp. N731 plasmid pRspN731c, complete sequence	331739-331768	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP017243	Rhizobium etli 8C-3 plasmid pRsp8C3b, complete sequence	334919-334948	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	NZ_CP034999	Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence	599640-599669	7	0.767
NZ_CP017229_3	3.6\|1444334\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444334-1444363	30	MH729874	Klebsiella phage KP179, complete genome	157222-157251	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP021149	Vibrio campbellii strain LA16-V1 plasmid pLA16-3, complete sequence	59877-59906	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP033147	Vibrio owensii strain V180403 plasmid pVOWZ4, complete sequence	26211-26240	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP034300	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-1, complete sequence	43606-43635	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP034296	Vibrio parahaemolyticus strain 20140829008-1 plasmid pVPGD2014-1, complete sequence	44077-44106	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	AP014859	Vibrio parahaemolyticus plasmid pVP2HP DNA, complete sequence, strain: VPE61	133321-133350	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	AP014861	Vibrio parahaemolyticus plasmid pVPE61b DNA, complete sequence, strain: VPE61	80818-80847	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP046413	Vibrio parahaemolyticus strain 19-021-D1 plasmid pVp_Kor-D1-1, complete sequence	831-860	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP033139	Vibrio owensii strain 1700302 plasmid pVOWZ1, complete sequence	99158-99187	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	KY705274	Streptococcus phage P7631, complete genome	5909-5938	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	MH937489	Streptococcus phage CHPC1034, partial genome	5112-5141	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	KY705275	Streptococcus phage P7632, complete genome	6123-6152	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	MH937492	Streptococcus phage CHPC1040, complete genome	4787-4816	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	MH937487	Streptococcus phage CHPC1029, complete genome	4799-4828	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	MH892357	Streptococcus phage SW8, complete genome	5459-5488	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	MH892354	Streptococcus phage SW3, complete genome	5371-5400	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP033143	Vibrio parahaemolyticus strain 160807 plasmid pVPWZ1, complete sequence	17522-17551	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP045862	Vibrio owensii strain SH14 plasmid pVHvo-R, complete sequence	62327-62356	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP014925	Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-1, complete sequence	29141-29170	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP034291	Vibrio parahaemolyticus strain 20140722001-1 plasmid pVPCZ2014-1, complete sequence	57573-57602	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP034287	Vibrio parahaemolyticus strain 20140624012-1 plasmid pVPHB2014-1, complete sequence	4615-4644	7	0.767
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	MK521907	Klebsiella phage vB_KpnS_FZ41, complete genome	24618-24647	7	0.767
NZ_CP017229_3	3.2\|1444070\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444070-1444099	30	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	6747-6776	8	0.733
NZ_CP017229_3	3.2\|1444070\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444070-1444099	30	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	525015-525044	8	0.733
NZ_CP017229_3	3.2\|1444070\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444070-1444099	30	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	525064-525093	8	0.733
NZ_CP017229_3	3.2\|1444070\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444070-1444099	30	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	24958-24987	8	0.733
NZ_CP017229_3	3.2\|1444070\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444070-1444099	30	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	728910-728939	8	0.733
NZ_CP017229_3	3.2\|1444070\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444070-1444099	30	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	812921-812950	8	0.733
NZ_CP017229_3	3.4\|1444202\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444202-1444231	30	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	562145-562174	8	0.733
NZ_CP017229_3	3.7\|1444400\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444400-1444429	30	NZ_CP009638	Bacillus cereus 03BB108 plasmid pBFI_4, complete sequence	41532-41561	8	0.733
NZ_CP017229_3	3.7\|1444400\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444400-1444429	30	NZ_CP009639	Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence	136933-136962	8	0.733
NZ_CP017229_3	3.7\|1444400\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444400-1444429	30	NZ_CP053963	Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence	178518-178547	8	0.733
NZ_CP017229_3	3.7\|1444400\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444400-1444429	30	NZ_CP053290	Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence	329259-329288	8	0.733
NZ_CP017229_3	3.7\|1444400\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444400-1444429	30	NC_005707	Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence	5819-5848	8	0.733
NZ_CP017229_3	3.7\|1444400\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444400-1444429	30	NZ_CP053966	Bacillus cereus strain FDAARGOS_802 plasmid unnamed5, complete sequence	54631-54660	8	0.733
NZ_CP017229_3	3.7\|1444400\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444400-1444429	30	NZ_CP054716	Salmonella enterica strain 85-0120 plasmid unnamed3, complete sequence	3953-3982	8	0.733
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP021331	Maritalea myrionectae strain HL2708#5 plasmid pHL2708X3, complete sequence	65016-65045	8	0.733
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_CP014913	Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-1, complete sequence	3927-3956	8	0.733
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	AP014115	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C36-MedDCM-OCT-S23-C51, * SEQUENCING IN PROGRESS *	28476-28505	8	0.733
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	MH552527	Inoviridae sp. isolate ctcb17, complete genome	184-213	8	0.733
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	AP014119	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C36-MedDCM-OCT-S41-C69, * SEQUENCING IN PROGRESS *	32691-32720	8	0.733
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	KF929199	Staphylococcus phage vB_SepS_SEP9, complete genome	70015-70044	8	0.733
NZ_CP017229_3	3.3\|1444136\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444136-1444165	30	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	284688-284717	9	0.7
NZ_CP017229_3	3.8\|1444466\|30\|NZ_CP017229\|CRISPRCasFinder,CRT,PILER-CR	1444466-1444495	30	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	354758-354787	9	0.7
NZ_CP017229_2	2.1\|1327941\|34\|NZ_CP017229\|CRISPRCasFinder	1327941-1327974	34	MH752385	Bacillus phage Ray17, complete genome	8509-8542	10	0.706

1. spacer 3.3|1444136|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

gcagaaaatggagatagacaagattttcct	CRISPR spacer
gcagaaaatggagatagacaagattttcct	Protospacer
******************************

2. spacer 3.2|1444070|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.967

aggggtgatattgttatgagtattatgaaa	CRISPR spacer
aggggtgatattgttatgagtattatgcaa	Protospacer
*************************** **

3. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 2, identity: 0.933

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
aaatcgtcgagctaaaactatagcaagaga	Protospacer
****************** ****** ****

4. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 2, identity: 0.933

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaatatgaggttgaagctaaacaagat	Protospacer
****** ****.******************

5. spacer 3.4|1444202|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 4, identity: 0.867

tccattc-tcataaaatatttagccattatt	CRISPR spacer
-ctattcatcataaaatttttagccattata	Protospacer
 *.**** ********* ************

6. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MT774375 (CrAssphage cr50_1, complete genome) position: , mismatch: 4, identity: 0.867

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gaagaagatgaagttgaatctaaacaagta	Protospacer
** *************** *********

7. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MN694729 (Marine virus AFVG_250M1111, complete genome) position: , mismatch: 4, identity: 0.867

-gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
acatggag-tgaagttaaagctaaacaagat	Protospacer
  ***.** *******.**************

8. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MN694290 (Marine virus AFVG_250M636, complete genome) position: , mismatch: 4, identity: 0.867

-gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
acatggag-tgaagttaaagctaaacaagat	Protospacer
  ***.** *******.**************

9. spacer 3.7|1444400|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to LC519601 (Cronobacter phage vB_CsaP_009 DNA, complete genome) position: , mismatch: 5, identity: 0.833

atat-tatattagaatttagaagttatttca	CRISPR spacer
-tacatatattagtatttataagttatttta	Protospacer
 **. ******** ***** *********.*

10. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to AP014312 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S30-C72, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.833

gatgaagatgaagttgaagctaa-acaagat	CRISPR spacer
gatgaagaagaagctgaagctaatactaaa-	Protospacer
******** ****.********* ** *.*

11. spacer 3.3|1444136|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NC_012226 (Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence) position: , mismatch: 6, identity: 0.8

gcagaaaatggagatagacaagattttcct	CRISPR spacer
gtagaaaatggagatggacaaaattcacat	Protospacer
*.*************.*****.***. * *

12. spacer 3.3|1444136|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019601 (Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence) position: , mismatch: 6, identity: 0.8

gcagaaaatggagatagacaagattttcct	CRISPR spacer
gtagaaaatggagatggacaaaattcacat	Protospacer
*.*************.*****.***. * *

13. spacer 3.5|1444268|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046714 (Nostoc sp. ATCC 53789 plasmid pNsp_k, complete sequence) position: , mismatch: 6, identity: 0.8

tatttgaacgcttaaaatcaagaaaatatt	CRISPR spacer
tatttgaacctttaaaatcaagaaatccgt	Protospacer
********* .************** .  *

14. spacer 3.7|1444400|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 6, identity: 0.8

atattatattagaatttagaagttatttca	CRISPR spacer
ctaattgattagaatttaaaagttatttct	Protospacer
 ** *  ***********.**********

15. spacer 3.2|1444070|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 7, identity: 0.767

aggggtgatattgttatgagtattatgaaa	CRISPR spacer
cgctgtgatatttttatgagtattatttca	Protospacer
 *  ******** *************   *

16. spacer 3.2|1444070|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to KC821622 (Cellulophaga phage phi46:3, complete genome) position: , mismatch: 7, identity: 0.767

aggggtgatattgttatgagtattatgaaa	CRISPR spacer
acggaatgtattgttatgagtatgatgaag	Protospacer
* **.  .*************** *****.

17. spacer 3.5|1444268|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to KX119200 (Helicobacter phage FrMEG235U, complete genome) position: , mismatch: 7, identity: 0.767

tatttgaacgcttaaaatcaagaaaatatt	CRISPR spacer
tttttgaacgcttaaaagcaagattttgat	Protospacer
* *************** *****   *. *

18. spacer 3.5|1444268|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to KX119201 (Helicobacter phage FrANT170U, complete genome) position: , mismatch: 7, identity: 0.767

tatttgaacgcttaaaatcaagaaaatatt	CRISPR spacer
tttttgaacgcttaaaagcaagattttgat	Protospacer
* *************** *****   *. *

19. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NC_004041 (Rhizobium etli CFN 42 plasmid p42d, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

20. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020898 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

21. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021027 (Rhizobium sp. TAL182 plasmid pRetTAL182c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

22. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013633 (Rhizobium sp. N324 plasmid pRspN324c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

23. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013555 (Rhizobium phaseoli strain N931 plasmid pRphaN931c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

24. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020950 (Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

25. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013587 (Rhizobium phaseoli strain N161 plasmid pRphaN161b, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

26. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013598 (Rhizobium sp. N741 plasmid pRspN741c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

27. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013561 (Rhizobium phaseoli strain N841 plasmid pRphaN841d, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

28. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013578 (Rhizobium phaseoli strain N671 plasmid pRphaN671d, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

29. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013550 (Rhizobium phaseoli strain R611 plasmid pRetR611c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

30. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013530 (Rhizobium phaseoli strain R723 plasmid pRphaR723c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

31. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013535 (Rhizobium phaseoli strain R650 plasmid pRphaR650c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

32. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013540 (Rhizobium phaseoli strain R630 plasmid pRphaR630c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

33. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013544 (Rhizobium phaseoli strain R620 plasmid pRphaR620b, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

34. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013566 (Rhizobium phaseoli strain N831 plasmid pRphaN831c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

35. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013502 (Rhizobium esperanzae strain N561 plasmid pRspN561b, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

36. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013583 (Rhizobium phaseoli strain N261 plasmid pRphaN261c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

37. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013508 (Rhizobium sp. N1341 plasmid pRspN1341c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

38. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013519 (Rhizobium sp. N113 plasmid pRspN113b, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

39. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013572 (Rhizobium phaseoli strain N771 plasmid pRphaN671d, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

40. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021125 (Rhizobium sp. Kim5 plasmid pRetKim5a, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

41. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013492 (Rhizobium sp. N6212 plasmid pRspN6212b, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

42. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013514 (Rhizobium sp. N1314 plasmid pRspN1314c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

43. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013497 (Rhizobium sp. N621 plasmid pRspN621b, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

44. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013592 (Rhizobium sp. N871 plasmid pRspN871b, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

45. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to CP007643 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803b, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

46. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NC_010996 (Rhizobium etli CIAT 652 plasmid pB, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

47. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013604 (Rhizobium sp. N731 plasmid pRspN731c, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

48. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017243 (Rhizobium etli 8C-3 plasmid pRsp8C3b, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

49. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034999 (Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
caatcgtcgagccaaaacagtagcgccaac	Protospacer
 ***********.******.****.* *.

50. spacer 3.6|1444334|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MH729874 (Klebsiella phage KP179, complete genome) position: , mismatch: 7, identity: 0.767

aaatcgtcgagctaaaacaatagcacgaga	CRISPR spacer
attacctcgagctaaatcaagagcacgagc	Protospacer
*   * ********** *** ********

51. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021149 (Vibrio campbellii strain LA16-V1 plasmid pLA16-3, complete sequence) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaaattgaagttaatgacggc	Protospacer
************.******.***  * *..

52. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033147 (Vibrio owensii strain V180403 plasmid pVOWZ4, complete sequence) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaaattgaagttaatgacggc	Protospacer
************.******.***  * *..

53. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034300 (Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-1, complete sequence) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaaattgaagttaatgacggc	Protospacer
************.******.***  * *..

54. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034296 (Vibrio parahaemolyticus strain 20140829008-1 plasmid pVPGD2014-1, complete sequence) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaaattgaagttaatgacggc	Protospacer
************.******.***  * *..

55. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to AP014859 (Vibrio parahaemolyticus plasmid pVP2HP DNA, complete sequence, strain: VPE61) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaaattgaagttaatgacggc	Protospacer
************.******.***  * *..

56. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to AP014861 (Vibrio parahaemolyticus plasmid pVPE61b DNA, complete sequence, strain: VPE61) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaaattgaagttaatgacggc	Protospacer
************.******.***  * *..

57. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046413 (Vibrio parahaemolyticus strain 19-021-D1 plasmid pVp_Kor-D1-1, complete sequence) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaaattgaagttaatgacggc	Protospacer
************.******.***  * *..

58. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033139 (Vibrio owensii strain 1700302 plasmid pVOWZ1, complete sequence) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaaattgaagttaatgacggc	Protospacer
************.******.***  * *..

59. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to KY705274 (Streptococcus phage P7631, complete genome) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagaagaagttaaagctaattttgtt	Protospacer
******** ******.******* .  * *

60. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MH937489 (Streptococcus phage CHPC1034, partial genome) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagaagaagttaaagctaattttgtt	Protospacer
******** ******.******* .  * *

61. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to KY705275 (Streptococcus phage P7632, complete genome) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagaagaagttaaagctaattttgtt	Protospacer
******** ******.******* .  * *

62. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MH937492 (Streptococcus phage CHPC1040, complete genome) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagaagaagttaaagctaattttgtt	Protospacer
******** ******.******* .  * *

63. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MH937487 (Streptococcus phage CHPC1029, complete genome) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagaagaagttaaagctaattttgtt	Protospacer
******** ******.******* .  * *

64. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MH892357 (Streptococcus phage SW8, complete genome) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagaagaagttaaagctaattttgtt	Protospacer
******** ******.******* .  * *

65. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MH892354 (Streptococcus phage SW3, complete genome) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagaagaagttaaagctaattttgtt	Protospacer
******** ******.******* .  * *

66. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033143 (Vibrio parahaemolyticus strain 160807 plasmid pVPWZ1, complete sequence) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaaattgaagttaatgacggc	Protospacer
************.******.***  * *..

67. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045862 (Vibrio owensii strain SH14 plasmid pVHvo-R, complete sequence) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaaattgaagttaatgacggc	Protospacer
************.******.***  * *..

68. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014925 (Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-1, complete sequence) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
actcaagatgaatttgaagctaaaaaaaag	Protospacer
. * ******** *********** **.*

69. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034291 (Vibrio parahaemolyticus strain 20140722001-1 plasmid pVPCZ2014-1, complete sequence) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaaattgaagttaatgacggc	Protospacer
************.******.***  * *..

70. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034287 (Vibrio parahaemolyticus strain 20140624012-1 plasmid pVPHB2014-1, complete sequence) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaaattgaagttaatgacggc	Protospacer
************.******.***  * *..

71. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MK521907 (Klebsiella phage vB_KpnS_FZ41, complete genome) position: , mismatch: 7, identity: 0.767

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gatgaagatgaagatgaagttaagttatac	Protospacer
************* *****.***.. * *.

72. spacer 3.2|1444070|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 8, identity: 0.733

aggggtgatattgttatgagtattatgaaa	CRISPR spacer
ataataaatattgttatgagtattttgata	Protospacer
* ..  .***************** *** *

73. spacer 3.2|1444070|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 8, identity: 0.733

aggggtgatattgttatgagtattatgaaa	CRISPR spacer
ataataaatattgttatgagtattttgata	Protospacer
* ..  .***************** *** *

74. spacer 3.2|1444070|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 8, identity: 0.733

aggggtgatattgttatgagtattatgaaa	CRISPR spacer
ataataaatattgttatgagtattttgata	Protospacer
* ..  .***************** *** *

75. spacer 3.2|1444070|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 8, identity: 0.733

aggggtgatattgttatgagtattatgaaa	CRISPR spacer
ataataaatattgttatgagtattttgata	Protospacer
* ..  .***************** *** *

76. spacer 3.2|1444070|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 8, identity: 0.733

aggggtgatattgttatgagtattatgaaa	CRISPR spacer
ataataaatattgttatgagtattttgata	Protospacer
* ..  .***************** *** *

77. spacer 3.2|1444070|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 8, identity: 0.733

aggggtgatattgttatgagtattatgaaa	CRISPR spacer
ataataaatattgttatgagtattttgata	Protospacer
* ..  .***************** *** *

78. spacer 3.4|1444202|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 8, identity: 0.733

tccattctcataaaatatttagccattatt	CRISPR spacer
ggaactctcataaaatatttatccaataac	Protospacer
   *.**************** *** ** .

79. spacer 3.7|1444400|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009638 (Bacillus cereus 03BB108 plasmid pBFI_4, complete sequence) position: , mismatch: 8, identity: 0.733

atattatattagaatttagaagttatttca	CRISPR spacer
tcattatattagaatttataatttatcgag	Protospacer
 .**************** ** ****.  .

80. spacer 3.7|1444400|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009639 (Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence) position: , mismatch: 8, identity: 0.733

atattatattagaatttagaagttatttca	CRISPR spacer
tcattatattagaatttataatttatcgag	Protospacer
 .**************** ** ****.  .

81. spacer 3.7|1444400|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053963 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

atattatattagaatttagaagttatttca	CRISPR spacer
tcattatattagaatttataatttatcgag	Protospacer
 .**************** ** ****.  .

82. spacer 3.7|1444400|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053290 (Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

atattatattagaatttagaagttatttca	CRISPR spacer
tcattatattagaatttataatttatcgag	Protospacer
 .**************** ** ****.  .

83. spacer 3.7|1444400|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NC_005707 (Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence) position: , mismatch: 8, identity: 0.733

atattatattagaatttagaagttatttca	CRISPR spacer
tcattatattagaatttataatttatcgag	Protospacer
 .**************** ** ****.  .

84. spacer 3.7|1444400|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053966 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

atattatattagaatttagaagttatttca	CRISPR spacer
tcattatattagaatttataatttatcgag	Protospacer
 .**************** ** ****.  .

85. spacer 3.7|1444400|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054716 (Salmonella enterica strain 85-0120 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

atattatattagaatttagaagttatttca	CRISPR spacer
aagaagaattcgaatttagaatttatttca	Protospacer
* .  . *** ********** ********

86. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021331 (Maritalea myrionectae strain HL2708#5 plasmid pHL2708X3, complete sequence) position: , mismatch: 8, identity: 0.733

gatgaagatgaagttgaagctaaacaagat-------	CRISPR spacer
gatgaagatgaagttcaagct-------atcatcccc	Protospacer
*************** *****       **

87. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014913 (Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-1, complete sequence) position: , mismatch: 8, identity: 0.733

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
actcaagatgaatttgaagctaaaaaaagc	Protospacer
. * ******** *********** **...

88. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to AP014115 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C36-MedDCM-OCT-S23-C51, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gttgaaaatgaagatgaagctaaactgtgg	Protospacer
* ****.****** *********** . .

89. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to MH552527 (Inoviridae sp. isolate ctcb17, complete genome) position: , mismatch: 8, identity: 0.733

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
actttggaagaagttgaagcaaaacaagaa	Protospacer
. *  .** *********** ********

90. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to AP014119 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C36-MedDCM-OCT-S41-C69, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
gttgaaaatgaagatgaagctaaactgtgg	Protospacer
* ****.****** *********** . .

91. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to KF929199 (Staphylococcus phage vB_SepS_SEP9, complete genome) position: , mismatch: 8, identity: 0.733

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
tataaagatgaaattgaagctaaatctatt	Protospacer
 **.********.***********.  . *

92. spacer 3.3|1444136|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 9, identity: 0.7

gcagaaaatggagatagacaagattttcct	CRISPR spacer
atagaaaatggagatagaaaagagaaggat	Protospacer
..**************** ****      *

93. spacer 3.8|1444466|30|NZ_CP017229|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 9, identity: 0.7

gatgaagatgaagttgaagctaaacaagat	CRISPR spacer
ccaaaagatgaagtagaagctagacaatta	Protospacer
   .********** *******.****

94. spacer 2.1|1327941|34|NZ_CP017229|CRISPRCasFinder matches to MH752385 (Bacillus phage Ray17, complete genome) position: , mismatch: 10, identity: 0.706

ttttttagctttatactcagccttactcatataa	CRISPR spacer
cttacaagctttatactcagccttattgatcgtt	Protospacer
.** . *******************.* **

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP017231

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017231_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017231_1

18302-18425

Orphan

Consensus_repeat	Method
TCTATTTTTGTCTCAAGAAAATGAAAAAAATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017231_1

>merge|NZ_CP017231|1|18302-18425|CRISPRCasFinder
TCTATTTTTGTCTCAAGAAAATGAAAAAAATAGAAAATTTTTTATAAAAAATGTATATTTTTTTACCAAAAAATGAGACAAAAGCAAAAAATCTATATTTTGTCTCAAGAAAATGAAAAAAATA

>NZ_CP017231|1|1|18302-18425|CRISPRCasFinder
TCTATTTTTGTCTCAAGAAAATGAAAAAAATA	GAAAATTTTTTATAAAAAATGTATATTTTTTTACCAAAAAATGAGACAAAAGCAAAAAAT
CTATATTTTGTCTCAAGAAAATGAAAAAAATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017231.1\|WP_088868055.1\|23954_24566_+\|conjugal-transfer-protein-TrbM	unknown	unknown	gnl\|CDD\|369359
NZ_CP017231.1\|WP_002907859.1\|10617_11304_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|349760
NZ_CP017231.1\|WP_002908162.1\|19947_20235_+\|VirB3-family-type-IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|184348
NZ_CP017231.1\|WP_052778222.1\|15374_15698_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017231.1\|WP_052779350.1\|24577_25171_+\|Rha-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378235
NZ_CP017231.1\|WP_002907867.1\|14801_15185_-\|DNA-transfer-protein	unknown	unknown	gnl\|CDD\|184361
NZ_CP017231.1\|WP_052777884.1\|18712_19651_+\|P-type-conjugative-transfer-ATPase-TrbB	unknown	unknown	gnl\|CDD\|274297
NZ_CP017231.1\|WP_088868054.1\|26839_28063_+\|P-type-conjugative-transfer-protein-TrbL	unknown	unknown	gnl\|CDD\|131830
NZ_CP017231.1\|WP_052796189.1\|12679_14839_-\|relaxase/mobilization-nuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|237539
NZ_CP017231.1\|WP_002908165.1\|19651_19948_+\|TrbC/VirB2-family-protein	unknown	unknown	gnl\|CDD\|184376
NZ_CP017231.1\|WP_002907869.1\|15692_16028_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017231.1\|WP_002801868.1\|16973_17888_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017231.1\|WP_172820137.1\|23160_23703_+\|phage-regulatory-protein	unknown	unknown	gnl\|CDD\|226144
NZ_CP017231.1\|WP_052796193.1\|10141_10537_+\|conjugal-transfer-protein-TraM	unknown	unknown	gnl\|CDD\|184378
NZ_CP017231.1\|WP_052796192.1\|11306_11531_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017231.1\|WP_079460393.1\|11877_12432_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP017231.1\|WP_002823910.1\|17884_18298_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350205

Protein	Function_ID	Function_description	E-value
NZ_CP017231.1\|WP_088868055.1\|23954_24566_+\|conjugal-transfer-protein-TrbM	gnl\|CDD\|369359	pfam07424, TrbM, TrbM. This family contains the bacterial protein TrbM (approximately 180 residues long). In Comamonas testosteroni T-2, TrbM is derived from the IncP1beta plasmid pTSA, which encodes the widespread genes for p-toluenesulfonate (TSA) degradation.	9.281e-46
NZ_CP017231.1\|WP_002907859.1\|10617_11304_+\|AAA-family-ATPase	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	8.43487e-37
NZ_CP017231.1\|WP_172820137.1\|23160_23703_+\|phage-regulatory-protein	gnl\|CDD\|226144	COG3617, COG3617, Prophage antirepressor [Transcription].	5.46836e-26
NZ_CP017231.1\|WP_088868054.1\|26839_28063_+\|P-type-conjugative-transfer-protein-TrbL	gnl\|CDD\|131830	TIGR02783, probable_conjugal_transfer_protein_TrbL, P-type conjugative transfer protein TrbL. The TrbL protein is found in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer. TrbL is a homolog of the F-type TraG protein (which is believed to be a mating pair stabilization pore-forming protein, pfam07916) as well as the vir system VirB6 protein. [Cellular processes, Conjugation].	6.23756e-35
NZ_CP017231.1\|WP_002907867.1\|14801_15185_-\|DNA-transfer-protein	gnl\|CDD\|184361	PRK13877, PRK13877, conjugal transfer transcriptional regulator TraJ.	9.46447e-14
NZ_CP017231.1\|WP_052777884.1\|18712_19651_+\|P-type-conjugative-transfer-ATPase-TrbB	gnl\|CDD\|274297	TIGR02782, conjugal_transfer_protein, P-type conjugative transfer ATPase TrbB. The TrbB protein is found in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer. TrbB is a homolog of the vir system VirB11 ATPase, and the Flp pilus sytem ATPase TadA. [Cellular processes, Conjugation].	2.7995e-147
NZ_CP017231.1\|WP_052796189.1\|12679_14839_-\|relaxase/mobilization-nuclease-domain-containing-protein	gnl\|CDD\|237539	PRK13878, PRK13878, conjugal transfer relaxase TraI; Provisional.	1.57005e-82
NZ_CP017231.1\|WP_002908165.1\|19651_19948_+\|TrbC/VirB2-family-protein	gnl\|CDD\|184376	PRK13892, PRK13892, conjugal transfer protein TrbC; Provisional.	4.98469e-22
NZ_CP017231.1\|WP_052779350.1\|24577_25171_+\|Rha-family-transcriptional-regulator	gnl\|CDD\|378235	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha). Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that Rha is a phage regulatory protein.	2.1495e-33
NZ_CP017231.1\|WP_052796193.1\|10141_10537_+\|conjugal-transfer-protein-TraM	gnl\|CDD\|184378	PRK13895, PRK13895, conjugal transfer protein TraM; Provisional.	0.000340302
NZ_CP017231.1\|WP_002823910.1\|17884_18298_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350205	cd09854, PIN_VapC-like, VapC-like PIN domains of VapC and Smg6 ribonucleases, ribosome assembly factor NOB1, rRNA-processing protein Fcf1, Archaeoglobus fulgidus AF0591 protein, and homologs. PIN (PilT N terminus) domains of such ribonucleases as the toxins of prokaryotic toxin/antitoxin operons FitAB and VapBC, as well as, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1, are included in VapC-like this family. Also included are the PIN domains of the Pyrobaculum aerophilum Pea0151 and Archaeoglobus fulgidus AF0591 proteins and other similar archaeal homologs. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.92595e-11
NZ_CP017231.1\|WP_079460393.1\|11877_12432_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.83121e-07
NZ_CP017231.1\|WP_002908162.1\|19947_20235_+\|VirB3-family-type-IV-secretion-system-protein	gnl\|CDD\|184348	PRK13823, PRK13823, conjugal transfer protein TrbD; Provisional.	1.84256e-36

>NZ_CP017231.1|WP_002823910.1|17884_18298_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MKKVFLDTNIFIDFFEETRENNQQAKQLIYFLISNDIKIIFSEDMISTVAYILKKENLGKFTHFIKTISLEKEFEIVSFGASVINMACDYYDKYQGDFEDYLQYFCAEKEGCCAIYTMDKNFPNLKIPVKRYGEIDI
>NZ_CP017231.1|WP_002801868.1|16973_17888_+|hypothetical-protein
MNNEIEIKDLNEINKNNKQQVVYRKDNLSTDCITGEVIERNQIIVRKVQTRESFIKLFTENIHYIINLEPQEKTLFFTLLSSVDYKNVVRFDKSMKQNIILDKVLSRAGMYRALNGLIEKKVIFKIDRDFVKSYAGVGSDDCYLFNPNLVGRGSWNDLKNLRHTITREWDFENLEVRENLEIEEEYLGLDEIKNNQKQYQVKEINQEHDETTKVKNTEIVIEEKNNSANNQYSFDKKEEPSINKKVLISNDTQPALFDENQKEQEARLFIEKFGGMFSGAYHPTKSAKELKREKLDQDLKEGKI
>NZ_CP017231.1|WP_002907869.1|15692_16028_-|hypothetical-protein
MEKSKKERIEKLSEKTKNLNLDNELYIFVNNIKWGKKANILINCVDLGTNIEFYFSVFFSNKYFSRSGDFNFREYMENSFENNRILAVKFKRSKTGYLNCFNARIAEVSDL
>NZ_CP017231.1|WP_052778222.1|15374_15698_+|hypothetical-protein
MKRGFAKIEFFANLEYLKQEYNKGYVVSKILYEKAKQDKNISMVYSQFNKYFNEVFKNKIEKREITQENNQSLALENKEPIKVKIDTKSKKVFDAKFGKDIKEDDLL
>NZ_CP017231.1|WP_002907867.1|14801_15185_-|DNA-transfer-protein
MKKTKQVNIRLTLEEYNLLTEKAQNHGLTLSRYLRDLSMNYPITCIIDQKVAHDVLNIAGDIGRLGGLFKHWLVRNEDNKANFSNKRSYEDIDEIVDQILDLQILLKEQAKRIIQNDNQKDSKQKTE
>NZ_CP017231.1|WP_052796189.1|12679_14839_-|relaxase/mobilization-nuclease-domain-containing-protein
MIIKKIPSKKQNKSSFKNLSNYILDKDNNNAKVLVDYMLDKNNEMDKVEGYHFTNCSFDNDEDNINEIINTQKLNTTTKQDKTLHLVVSFQEDEKPTLEILQAIEEEIAKSLGMSDHQRLSVIHSNTNNLHIHIAINKVNPRTLKVVNPYNDVKILQETAMKLEKQYNLKLDNHISQKDKQSNKYNIHTMNCNFETWVKEKVSKQVDLMLKDEKTTFKDIKQLLAKYDLEFRERRKGFVIASKSEKLFCKASSIHRELSKQALEKRFKELDLKQEKENTQNIEEEKREIKERYQRPNKETSKALWEKYLRIENEKKAELDKELRMLKLRRNEFKTSIPSMKFNKNTFAHVKNQRMIFKNKQKELYQKYKRVSYRDFLINESLSGNEEATRALRRSKTKINENENTLSSEQEKPKIFENVDYITKEGYAVYKSGFNKAIDKGEMLKVSLIQNGKDDKEFLLNSLLMAIDRFGNHLNITGDENFKRNILEVANDYNLNVSFTDPQMQKIQESNNDKRQEMKSRKILKNIVELKIKLIKDEPGIKENIKEKELKALKAILKKVSNTTLSVFEAELKKIGFSSDEINSMDIQSIDTQIEGFVVNSINKEGLIAMNEEIKQALIDDKEIKKFEKFEHLFLNTNKITDIAKGFYTNRKIDADEYVKRFSMQESKISKVANVISMLSDKNIDIMEKYAKKLEKDLKYQYLKKAEVIKSNDINLNNF
>NZ_CP017231.1|WP_079460393.1|11877_12432_+|GNAT-family-N-acetyltransferase
MIKQIFNKLINKYFNSKKSSIKLNIAEHKDIDFIMWCIDDGVKHGHFINISKENIEKVITTFSLSKIFIINFNTVPIGIIIENHLLHYYDHYIINHSNNQKLYGLEINVLYIKKEFRNKGIGSAIITYYEKETDYNKILVRCEQNNSKKSINFFEKLGYKKIGFDKQSKHNMTHIILEKNLQKE
>NZ_CP017231.1|WP_052796192.1|11306_11531_+|hypothetical-protein
MGFKKLSSETPKNENDFVNSARGETNNAKTSNAKRNKKLVVNFTEEEYQTLNQEANSIGLSLNSYVRFKIFRKD
>NZ_CP017231.1|WP_002907859.1|10617_11304_+|AAA-family-ATPase
MIISVVNEKGGSGKTTLAVNLSARLAEDGDNVLLIDADPQKSTEVFSDMRSQSNLEPLFSNVSKTGVSLGDEIKRMKNAFDSIIVDTGGRDSKEMRKAILSSNIIIIPTIPSQYDVNVLDHMLEIYNEVIDINPNLLALVLVNRVSPNPFLAKELENLKEYINETKKEKGLDRVIMLESVIYERQAYRKAVIEGKSMKEFCDKNDKALNDFENFYQELLKITNEKLGV
>NZ_CP017231.1|WP_052796193.1|10141_10537_+|conjugal-transfer-protein-TraM
MNKKELIEEIAKKHHIILDENDPILAVVSANEIIFDDFLKKIDLLFTKHKTDLESYKFNIFNEIREYSKSNQEALKDILIQAQTNQNTIKPSQEKTEDTKEKKNTNINFWIVAIAGQIIFLLVGLIIGITI
>NZ_CP017231.1|WP_052777884.1|18712_19651_+|P-type-conjugative-transfer-ATPase-TrbB
MSNLEFQARINEKIKREFGDIFFYLEDKETIELMLNSDGKLWLEKLGQDMICLGDFSEAKAKSIITAVSTLLDTTTNAENPILECELPLDGSRFEALLPPIVAKPTFTIRKKAVKIFTLDDYVESKILTPKQKEVLINAIKERQNILVVGGTGSGKTTFSNAIIDGISKITPDHRIVIIEDTAELQCASENKVILRATDKVDMLRLLKATMRLRPDRIIVGETRGKEALDLLKAWNTGHPGGIATIHANSANGGLTRMEQLISEATNAKMSKLIAEAVNLIVFISKSKEGRKVKEIIKVIDYENDKYITQGV
>NZ_CP017231.1|WP_002908165.1|19651_19948_+|TrbC/VirB2-family-protein
MKKFLLLFLILGLGYALASTTGAGLPWESPLQTIKQSISGPVAFVISLLAIIAAGAGLIWGGELSGFLKTLIYIVIIIALVVGANSFMSLFTTSGALI
>NZ_CP017231.1|WP_002908162.1|19947_20235_+|VirB3-family-type-IV-secretion-system-protein
MEELHRVDIYSALNKPNLMLGADRELIMMTGLISASLIFTGATIVTTIVGVVLFFICSLLLRLMAKSDPLMRQIFIRQNKYKKFYYPQSTPFSKD
>NZ_CP017231.1|WP_172820137.1|23160_23703_+|phage-regulatory-protein
MLFENEELGQVRTIRDKNNEPLFCLNDICKILNIKKTNSVRDSINKEFDKGGVFEWHPFKTLGGIQKFIVINEPELYFVLMRSDKPKAKPFRQWVIKEVLPSIRKQGYYASNNTPKLENYYKYKIPNTPYRENIIKAIIQTEQNRNCEFEELIAYEIKEIYKDNKSHIEQKINFRAKGLI
>NZ_CP017231.1|WP_088868055.1|23954_24566_+|conjugal-transfer-protein-TrbM
MGSNAFADDILTGDTKLACEAILCLSSGTRPAECGPSLARYFAIHFKKPWKTIDARKAFLNLCPIQNDTNVEDLVLKNLVDDVLPSSDPRQCTPNYLNTQVETKRSYSTFGIMSYRINPNMPNFCHALINHAYTDYKMPKYTCTGEFYNSLEWKLSAKLQLITQQVYQSLPDNQRYMISKTCGDRNCYDYYQKIPFTKECWTY
>NZ_CP017231.1|WP_052779350.1|24577_25171_+|Rha-family-transcriptional-regulator
MSNTSIININNQEVIFENKDEQVFCTSLDVAKVFGKRHDNVLADIKLILNDLREIGTSNDLLNFQEVVRISKTTNPKNGKLVSRKMPIYNLTRDGFSLLAMGFTGKKALRFKIAFINAFNEMERIIKNQYTPKLKNYNKYKIPNTPYKENIIKAIMQTEQNRNCEFEELIAYEIKEIYKDNKSHIEQKINFRAKGLI
>NZ_CP017231.1|WP_088868054.1|26839_28063_+|P-type-conjugative-transfer-protein-TrbL
MELAKIKTIKQTPLNGNKLRLILIFCFLIPNLAFGAETAEGVLNILRNGLLSWTPLIKTACLWVFFTLVVIDLVWTFGLKALSGFEFGEFLATLIKKIIYIGIFIFLFNVDYWLQIIFNSFSQLATNVNNGLDIYPSNIIQNAFKIVMIILKSMSVTSPGESFFKVISGIIILIAFVLMAIDLLIVYLKFFLMNVIIYFALALGGLNHFKQIGLNPITTAIKVGIELFMIQGLMGLCITIIEKTYNEMDQEISYEITLAVLVTSLIFCMITKMIPGIIEAVFNGSIGESAGAAAGFRAVATMAAGAATGAAVGAVGVTRAMNAAKELHLAEGGKGGMDLVKGVAKHLATSGGEHLRDNLTKGRMPHQMANRLQEKLKDIQGKASEGGISSGTPKEENYQSGVNPNAM

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NZ_CP017231_1	1.1\|18334\|60\|NZ_CP017231\|CRISPRCasFinder	18334-18393	60	NZ_CP045792	Campylobacter coli strain CFSAN032805 plasmid p2CFSAN032805, complete sequence	24800-24859	1.0
NZ_CP017231_1	1.1\|18334\|60\|NZ_CP017231\|CRISPRCasFinder	18334-18393	60	NZ_CP017231	Campylobacter jejuni strain FORC_046 isolate Not reported plasmid pFORC46.2, complete sequence	18334-18393	1.0
NZ_CP017231_1	1.1\|18334\|60\|NZ_CP017231\|CRISPRCasFinder	18334-18393	60	NZ_CP046318	Campylobacter coli strain FDAARGOS_735 plasmid unnamed1, complete sequence	2746-2805	1.0
NZ_CP017231_1	1.1\|18334\|60\|NZ_CP017231\|CRISPRCasFinder	18334-18393	60	NZ_CP023547	Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_2, complete sequence	6984-7043	1.0
NZ_CP017231_1	1.1\|18334\|60\|NZ_CP017231\|CRISPRCasFinder	18334-18393	60	NZ_CP017867	Campylobacter coli strain YF2105 plasmid pCCDM105S, complete sequence	10520-10579	1.0
NZ_CP017231_1	1.1\|18334\|60\|NZ_CP017231\|CRISPRCasFinder	18334-18393	60	NZ_CP017880	Campylobacter coli strain BG2108 plasmid pCCDM108S, complete sequence	15734-15793	1.0
NZ_CP017231_1	1.1\|18334\|60\|NZ_CP017231\|CRISPRCasFinder	18334-18393	60	NZ_CP017874	Campylobacter coli strain WA333 plasmid pCCDM33S, complete sequence	17689-17748	1.0
NZ_CP017231_1	1.1\|18334\|60\|NZ_CP017231\|CRISPRCasFinder	18334-18393	60	NZ_MH634990	Campylobacter coli strain XK3140 plasmid pCCDM140S, complete sequence	5397-5456	1.0
NZ_CP017231_1	1.1\|18334\|60\|NZ_CP017231\|CRISPRCasFinder	18334-18393	60	NZ_MH634987	Campylobacter coli strain P118 plasmid pCCDM18M, complete sequence	18818-18877	1.0
NZ_CP017231_1	1.1\|18334\|60\|NZ_CP017231\|CRISPRCasFinder	18334-18393	60	NZ_CP028188	Campylobacter coli strain CFSAN054106 plasmid pGMI16-001, complete sequence	12554-12613	1.0

1. spacer 1.1|18334|60|NZ_CP017231|CRISPRCasFinder matches to NZ_CP045792 (Campylobacter coli strain CFSAN032805 plasmid p2CFSAN032805, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	CRISPR spacer
gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	Protospacer
************************************************************

2. spacer 1.1|18334|60|NZ_CP017231|CRISPRCasFinder matches to NZ_CP017231 (Campylobacter jejuni strain FORC_046 isolate Not reported plasmid pFORC46.2, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	CRISPR spacer
gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	Protospacer
************************************************************

3. spacer 1.1|18334|60|NZ_CP017231|CRISPRCasFinder matches to NZ_CP046318 (Campylobacter coli strain FDAARGOS_735 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	CRISPR spacer
gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	Protospacer
************************************************************

4. spacer 1.1|18334|60|NZ_CP017231|CRISPRCasFinder matches to NZ_CP023547 (Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_2, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	CRISPR spacer
gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	Protospacer
************************************************************

5. spacer 1.1|18334|60|NZ_CP017231|CRISPRCasFinder matches to NZ_CP017867 (Campylobacter coli strain YF2105 plasmid pCCDM105S, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	CRISPR spacer
gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	Protospacer
************************************************************

6. spacer 1.1|18334|60|NZ_CP017231|CRISPRCasFinder matches to NZ_CP017880 (Campylobacter coli strain BG2108 plasmid pCCDM108S, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	CRISPR spacer
gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	Protospacer
************************************************************

7. spacer 1.1|18334|60|NZ_CP017231|CRISPRCasFinder matches to NZ_CP017874 (Campylobacter coli strain WA333 plasmid pCCDM33S, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	CRISPR spacer
gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	Protospacer
************************************************************

8. spacer 1.1|18334|60|NZ_CP017231|CRISPRCasFinder matches to NZ_MH634990 (Campylobacter coli strain XK3140 plasmid pCCDM140S, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	CRISPR spacer
gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	Protospacer
************************************************************

9. spacer 1.1|18334|60|NZ_CP017231|CRISPRCasFinder matches to NZ_MH634987 (Campylobacter coli strain P118 plasmid pCCDM18M, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	CRISPR spacer
gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	Protospacer
************************************************************

10. spacer 1.1|18334|60|NZ_CP017231|CRISPRCasFinder matches to NZ_CP028188 (Campylobacter coli strain CFSAN054106 plasmid pGMI16-001, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	CRISPR spacer
gaaaattttttataaaaaatgtatatttttttaccaaaaaatgagacaaaagcaaaaaat	Protospacer
************************************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017229

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP017231

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection